BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2391
(642 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|C Chain C, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|D Chain D, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOQ|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
pdb|2IOQ|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
Length = 624
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/633 (53%), Positives = 457/633 (72%), Gaps = 12/633 (1%)
Query: 10 IKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDN 69
+K ++T GFQ+EVK +L LMIHSLYSNKEIFLRELISNASDA DKLRF ++N + +
Sbjct: 1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD 60
Query: 70 SDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLI 129
+L + ++FDKD RT+ ISDNG+GM R+++I +LGTIAKSGT+ F L DQ KD+ LI
Sbjct: 61 GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI 120
Query: 130 GQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITLYL 189
GQFGVGFYSAFIVA K+ V++R GV WES G G +T+ I K +RGT+ITL+L
Sbjct: 121 GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL 180
Query: 190 RSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWA 249
R E+E+L W+++SII KYSDHI+ P+++ K +E+ ETVIS +E IN+A ALW
Sbjct: 181 REGEDEFLDDWRVRSIISKYSDHIALPVEIEKR--EEKDGETVIS---WEKINKAQALWT 235
Query: 250 RGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRN 309
R KSEITDE+Y EFYKHI+HDF PL ++HN VEG+ EY LLYIPS+AP+D+W+R+ ++
Sbjct: 236 RNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKH 295
Query: 310 GIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKR 369
G+KLYV+RVFIMDDAEQ +P YLRFV+G+IDS++LPLNVSREILQ+S + +R TKR
Sbjct: 296 GLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKR 355
Query: 370 ILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDI 429
+L +LE L+ K+ KY FW++FG V+KEG ED N+E I+KLLRFAST+ DS
Sbjct: 356 VLQMLEKLA----KDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSA 411
Query: 430 QNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSF 489
Q VSL DY+ RMKEGQ KIYYIT ++Y + K+SPHLE+ +KK IEVLLL+DR+DEWM+++
Sbjct: 412 QTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNY 471
Query: 490 IPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDVRVTY 549
+ +F+ K S++K + L L +E D I+ +K +L E+ KDVR+T+
Sbjct: 472 LTEFDGKPFQSVSKVDESLEKLADEVD-ESAKEAEKALTPFIDRVKALLGERVKDVRLTH 530
Query: 550 RLTDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILEINPNHALIQRIQLNND--NIH 607
RLTD+PA + D +E S M ++ AAGQ+ P K I E+NP+H L++R D
Sbjct: 531 RLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFS 590
Query: 608 NWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
W +L DQALLAE G L DP F++R+N++L+
Sbjct: 591 EWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 623
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
Length = 559
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/569 (55%), Positives = 418/569 (73%), Gaps = 10/569 (1%)
Query: 10 IKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDN 69
+K ++T GFQ+EVK +L LMIHSLYSNKEIFLRELISNASDA DKLRF ++N + +
Sbjct: 1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD 60
Query: 70 SDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLI 129
+L + ++FDKD RT+ ISDNG+GM R+++I +LGTIAKSGT+ F L DQ KD+ LI
Sbjct: 61 GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI 120
Query: 130 GQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITLYL 189
GQFGVGFYSAFIVA K+ V++R GV WES G G +T+ I K +RGT+ITL+L
Sbjct: 121 GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL 180
Query: 190 RSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFEVINQASALWA 249
R E+E+L W+++SII KYSDHI+ P+++ K +E+ ETVIS +E IN+A ALW
Sbjct: 181 REGEDEFLDDWRVRSIISKYSDHIALPVEIEKR--EEKDGETVIS---WEKINKAQALWT 235
Query: 250 RGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRNKRN 309
R KSEITDE+Y EFYKHI+HDF PL ++HN VEG+ EY LLYIPS+AP+D+W+R+ ++
Sbjct: 236 RNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKH 295
Query: 310 GIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKR 369
G+KLYV+RVFIMDDAEQ +P YLRFV+G+IDS++LPLNVSREILQ+S + +R TKR
Sbjct: 296 GLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKR 355
Query: 370 ILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDI 429
+L +LE L+ K+ KY FW++FG V+KEG ED N+E I+KLLRFAST+ DS
Sbjct: 356 VLQMLEKLA----KDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSA 411
Query: 430 QNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSF 489
Q VSL DY+ RMKEGQ KIYYIT ++Y + K+SPHLE+ +KK IEVLLL+DR+DEWM+++
Sbjct: 412 QTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNY 471
Query: 490 IPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDVRVTY 549
+ +F+ K S++K + L L +E D I+ +K +L E+ KDVR+T+
Sbjct: 472 LTEFDGKPFQSVSKVDESLEKLADEVD-ESAKEAEKALTPFIDRVKALLGERVKDVRLTH 530
Query: 550 RLTDSPACLVVDENEPSGNMIRMLKAAGQ 578
RLTD+PA + D +E S M ++ AAGQ
Sbjct: 531 RLTDTPAIVSTDADEMSTQMAKLFAAAGQ 559
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1U|B Chain B, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1V|A Chain A, Structure Of Full Length Grp94 With Adp Bound
pdb|2O1V|B Chain B, Structure Of Full Length Grp94 With Adp Bound
Length = 666
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/660 (39%), Positives = 393/660 (59%), Gaps = 61/660 (9%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+ FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N +L
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELT 82
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS---LIG 130
+ I DK+ ++++D G+GM R +++ NLGTIAKSGT EF +K++ Q+ S LIG
Sbjct: 83 VKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIG 142
Query: 131 QFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITL 187
QFGVGFYSAF+VA K+IV S+H N T+ + WES+ S F++ N RGT ITL
Sbjct: 143 QFGVGFYSAFLVADKVIVTSKHNND--TQHI-WESD-SNEFSVIADPRGNTLGRGTTITL 198
Query: 188 YLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY--------KETWDEEKKETVISNNEFE 239
L+ + +YL +K++++KYS I+FPI ++ K WD +E
Sbjct: 199 VLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVWD------------WE 246
Query: 240 VINQASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAP 299
++N +W R E+ D++Y FYK S + + P+ Y H EG + +L++P+ AP
Sbjct: 247 LMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAP 306
Query: 300 YDLWDR---NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQES 356
L+D K + IKLYV+RVFI DD ++P YL FVKGV+DS++LPLNVSRE LQ+
Sbjct: 307 RGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQH 366
Query: 357 RDVKVIREGSTKRILNILEDLSTSNDKEKIIKYAN-FWKEFGQVIKEGIGEDNNNKERIS 415
+ +KVIR+ ++ L++++ ++ KY + FWKEFG IK G+ ED++N+ R++
Sbjct: 367 KLLKVIRKKLVRKTLDMIKKIADE-------KYNDTFWKEFGTNIKLGVIEDHSNRTRLA 419
Query: 416 KLLRFASTNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEV 475
KLLRF S+++ SDI SL Y++RMKE Q+KIY++ G + K ++SP +E KK EV
Sbjct: 420 KLLRFQSSHHPSDI--TSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEV 477
Query: 476 LLLTDRVDEWMLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMK 535
+ LT+ VDE+ + +P+F+ K ++AK + E+E F+ L+ MK
Sbjct: 478 IYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFD--ESEKTKESREAIEKEFEPLLNWMK 535
Query: 536 -KILSEKAKDVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQET---------PNSKP 585
K L +K + V+ RLT+SP LV + SGNM R++KA +T + K
Sbjct: 536 DKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKK 595
Query: 586 ILEINPNHALI----QRIQLNNDN--IHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
EINP H LI +R++ + D+ + + + +LF+ A L +L D + R+ ML
Sbjct: 596 TFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERML 655
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CG9|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 677
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/687 (36%), Positives = 399/687 (58%), Gaps = 79/687 (11%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGA--DVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTN----RGTDITLYL 189
VGFYS F+VA ++ V S+ + E +WES G+FT+ T+++ N RGT + L+L
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTV-TLDEVNERIGRGTILRLFL 177
Query: 190 RSKEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISN-------------- 235
+ + EYL ++K +I+++S+ +++PI++ E +KE I
Sbjct: 178 KDDQLEYLEEKRIKEVIKRHSEFVAYPIQLV--VTKEVEKEVPIPEEEKKDEEKKDEEKK 235
Query: 236 -----------------------------NEFEVINQASALWARGKSEITDEQYIEFYKH 266
E E +N+ LW R S+IT E+Y FYK
Sbjct: 236 DEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKS 295
Query: 267 ISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-RNKRNGIKLYVKRVFIMDDAE 325
IS+D+E PL H VEG+ E+ +L+IP RAP+DL++ + K+N IKLYV+RVFI D+AE
Sbjct: 296 ISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAE 355
Query: 326 QLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREGSTKRILNILEDLSTSNDKEK 385
L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KVIR+ K+++ +++ ++
Sbjct: 356 DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSE--- 412
Query: 386 IIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNNDSDIQNVSLMDYIKRMKEGQ 445
++ F+ F + IK G+ ED N+ ++KLLR+ ST + ++ SL DY+ RM E Q
Sbjct: 413 --QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDEL--TSLTDYVTRMPEHQ 468
Query: 446 NKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEWMLSFIPKFENKELVSIAKGN 505
IYYITGE+ K+V+ SP L+ + K+ EVL LTD +DE+ + + +FE K LV I K
Sbjct: 469 KNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITK-- 526
Query: 506 LDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDVRVTYRLTDSPACLVVDENEP 565
D E + + ++ L + +K+IL ++ + V V+Y+L D+PA + +
Sbjct: 527 -DFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGW 585
Query: 566 SGNMIRMLKAAG------QETPNSKPILEINPNHALIQRIQLNND-------NIHNWSHI 612
S NM R++KA +SK EI+P +I+ ++ D + + + +
Sbjct: 586 SANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKL 645
Query: 613 LFDQALLAENGVLNDPMNFVKRLNEML 639
L++ ALL L++P +F R+N ++
Sbjct: 646 LYETALLTSGFSLDEPTSFASRINRLI 672
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|B Chain B, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|C Chain C, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|D Chain D, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|E Chain E, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
Length = 506
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/508 (42%), Positives = 323/508 (63%), Gaps = 43/508 (8%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+ FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N +L
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELT 82
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS---LIG 130
+ I DK+ ++++D G+GM R +++ NLGTIAKSGT EF +K++ Q+ S LIG
Sbjct: 83 VKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIG 142
Query: 131 QFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITL 187
QFGVGFYSAF+VA K+IV S+H N T+ + WES+ S F++ N RGT ITL
Sbjct: 143 QFGVGFYSAFLVADKVIVTSKHNND--TQHI-WESD-SNEFSVIADPRGNTLGRGTTITL 198
Query: 188 YLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY--------KETWDEEKKETVISNNEFE 239
L+ + +YL +K++++KYS I+FPI ++ K WD +E
Sbjct: 199 VLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVWD------------WE 246
Query: 240 VINQASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAP 299
++N +W R E+ D++Y FYK S + + P+ Y H EG + +L++P+ AP
Sbjct: 247 LMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAP 306
Query: 300 YDLWDR---NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQES 356
L+D K + IKLYV+RVFI DD ++P YL FVKGV+DS++LPLNVSRE LQ+
Sbjct: 307 RGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQH 366
Query: 357 RDVKVIREGSTKRILNILEDLSTSNDKEKIIKYAN-FWKEFGQVIKEGIGEDNNNKERIS 415
+ +KVIR+ ++ L++++ ++ KY + FWKEFG IK G+ ED++N+ R++
Sbjct: 367 KLLKVIRKKLVRKTLDMIKKIADE-------KYNDTFWKEFGTNIKLGVIEDHSNRTRLA 419
Query: 416 KLLRFASTNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEV 475
KLLRF S+++ SDI SL Y++RMKE Q+KIY++ G + K ++SP +E KK EV
Sbjct: 420 KLLRFQSSHHPSDI--TSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEV 477
Query: 476 LLLTDRVDEWMLSFIPKFENKELVSIAK 503
+ LT+ VDE+ + +P+F+ K ++AK
Sbjct: 478 IYLTEPVDEYCIQALPEFDGKRFQNVAK 505
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
pdb|2GQ0|B Chain B, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
Length = 303
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 210/276 (76%), Gaps = 12/276 (4%)
Query: 244 ASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLW 303
A ALW R KSEITDE+Y EFYKHI+HDF PL ++HN VEG+ EY LLYIPS+AP+D+W
Sbjct: 2 AQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 61
Query: 304 DRNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIR 363
+R+ ++G+KLYV+RVFIMDDAEQ +P YLRFV+G+IDS++LPLNVSREILQ+S + +R
Sbjct: 62 NRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLR 121
Query: 364 EGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFAST 423
TKR+L +LE L+ K+ KY FW++FG V+KEG ED N+E I+KLLRFAST
Sbjct: 122 NALTKRVLQMLEKLA----KDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFAST 177
Query: 424 NNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVD 483
+ DS Q VSL DY+ RMKEGQ KIYYIT ++Y + K+SPHLE+ +KK IEVLLL+DR+D
Sbjct: 178 HTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRID 237
Query: 484 EWMLSFIPKFENKELVSIAK--------GNLDLGNL 511
EWM++++ +F+ K S++K + DLG L
Sbjct: 238 EWMMNYLTEFDGKPFQSVSKVDESLEKLADGDLGTL 273
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|D Chain D, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 405
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 246/407 (60%), Gaps = 24/407 (5%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-R 305
LW R S+IT E+Y FYK IS+D+E PL H VEG+ E+ +L+IP RAP+DL++ +
Sbjct: 4 LWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESK 63
Query: 306 NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREG 365
K+N IKLYV+RVFI D+AE L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KVIR+
Sbjct: 64 KKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN 123
Query: 366 STKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNN 425
K+++ +++ ++ ++ F+ F + IK G+ ED N+ ++KLLR+ ST +
Sbjct: 124 IVKKLIEAFNEIAEDSE-----QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKS 178
Query: 426 DSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEW 485
++ SL DY+ RM E Q IYYITGE+ K+V+ SP L+ + K+ EVL LTD +DE+
Sbjct: 179 VDEL--TSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEY 236
Query: 486 MLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDV 545
+ + +FE K LV I K D E + + ++ L + +K+IL ++ + V
Sbjct: 237 AFTQLKEFEGKTLVDITK---DFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKV 293
Query: 546 RVTYRLTDSPACLVVDENEPSGNMIRMLKAAG------QETPNSKPILEINPNHALIQRI 599
V+Y+L D+PA + + S NM R++KA +SK EI+P +I+ +
Sbjct: 294 VVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKEL 353
Query: 600 QLNND-------NIHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
+ D + + + +L++ ALL L++P +F R+N ++
Sbjct: 354 KKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLI 400
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312
Length = 444
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 246/406 (60%), Gaps = 22/406 (5%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWDRN 306
LW R ++T E+Y FYK IS+D+E P H VEG+ E+ ++++P RAP+D+++ N
Sbjct: 22 LWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEPN 81
Query: 307 K-RNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREG 365
K RN IKLYV+RVFIMD+ E L P +L FVKGV+DS +LPLN+SRE LQ+++ +KVIR+
Sbjct: 82 KKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKN 141
Query: 366 STKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNN 425
K+ L + ++++ + + Y F+++FG+ IK GI ED N++++ +LLRF ST +
Sbjct: 142 IVKKCLEMFDEVAENKE-----DYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTES 196
Query: 426 DSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEW 485
++ +L DY+ RMK GQ IYYITG++ K ++ SP +E +++ +EVL +T+ +DE+
Sbjct: 197 GEEM--TTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEY 254
Query: 486 MLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDV 545
++ + FE+K+ + K + E E + L + MK++L +K + V
Sbjct: 255 VMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAAC--EKLCKTMKEVLGDKVEKV 312
Query: 546 RVTYRLTDSPACLVVDENEPSGNMIRMLK------AAGQETPNSKPILEINPNHALIQRI 599
V+ RL+ SP LV E S +M ++++ ++ + SK +E+NP H +I+ +
Sbjct: 313 IVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKEL 372
Query: 600 QL------NNDNIHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
+ N+ + + +LFD +LL L DP + +R+N M+
Sbjct: 373 RRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMI 418
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|B Chain B, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|C Chain C, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6N|A Chain A, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|B Chain B, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|C Chain C, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|D Chain D, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|E Chain E, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|F Chain F, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
Length = 448
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/406 (39%), Positives = 250/406 (61%), Gaps = 22/406 (5%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-R 305
+W R +IT+E+Y EFYK +++D+E L H VEG+ E+ LL++P RAP+DL++ R
Sbjct: 6 IWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENR 65
Query: 306 NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREG 365
K+N IKLYV+RVFIMD+ E+L+P YL F++GV+DS +LPLN+SRE+LQ+S+ +KVIR+
Sbjct: 66 KKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKN 125
Query: 366 STKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNN 425
K+ L + +L + DKE Y F+++F + IK GI ED+ N++++S+LLR+ ++ +
Sbjct: 126 LVKKCLELFTEL--AEDKE---NYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSAS 180
Query: 426 DSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEW 485
++ VSL DY RMKE Q IYYITGE V NS +E +K +EV+ + + +DE+
Sbjct: 181 GDEM--VSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEY 238
Query: 486 MLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSEKAKDV 545
+ + +FE K LVS+ K L E+E + F+NL + MK IL +K + V
Sbjct: 239 CVQQLKEFEGKTLVSVTKEG--LELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKV 296
Query: 546 RVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQETPN------SKPILEINPNHALIQRI 599
V+ RL SP C+V + NM R++KA + +K LEINP+H++I+ +
Sbjct: 297 VVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETL 356
Query: 600 QL------NNDNIHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
+ N+ ++ + +L++ ALL+ L DP R+ M+
Sbjct: 357 RQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMI 402
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|B Chain B, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|C Chain C, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|D Chain D, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|E Chain E, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|F Chain F, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|G Chain G, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|H Chain H, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|I Chain I, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|J Chain J, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
Length = 450
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 243/419 (57%), Gaps = 31/419 (7%)
Query: 241 INQASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPY 300
+N +W R E+ D++Y FYK S + + P+ Y H EG + +L++P+ AP
Sbjct: 21 MNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPR 80
Query: 301 DLWDR---NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESR 357
L+D K + IKLYV+RVFI DD ++P YL FVKGV+DS++LPLNVSRE LQ+ +
Sbjct: 81 GLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHK 140
Query: 358 DVKVIREGSTKRILNILEDLSTSNDKEKIIKYAN-FWKEFGQVIKEGIGEDNNNKERISK 416
+KVIR+ ++ L++++ ++ KY + FWKEFG IK G+ ED++N+ R++K
Sbjct: 141 LLKVIRKKLVRKTLDMIKKIADE-------KYNDTFWKEFGTNIKLGVIEDHSNRTRLAK 193
Query: 417 LLRFASTNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVL 476
LLRF S+++ SDI SL Y++RMKE Q+KIY++ G + K ++SP +E KK EV+
Sbjct: 194 LLRFQSSHHPSDI--TSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVI 251
Query: 477 LLTDRVDEWMLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMK- 535
LT+ VDE+ + +P+F+ K ++AK + E+E F+ L+ MK
Sbjct: 252 YLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFD--ESEKTKESREAIEKEFEPLLNWMKD 309
Query: 536 KILSEKAKDVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQET---------PNSKPI 586
K L +K + V+ RLT+SP LV + SGNM R++KA +T + K
Sbjct: 310 KALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKT 369
Query: 587 LEINPNHALI----QRIQLNNDN--IHNWSHILFDQALLAENGVLNDPMNFVKRLNEML 639
EINP H LI +R++ + D+ + + + +LF+ A L +L D + R+ ML
Sbjct: 370 FEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERML 428
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The
Escherichia Coli Hsp90, Bound To Adp
Length = 235
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 161/214 (75%)
Query: 8 SIIKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFIST 67
S +K ++T GFQ+EVK +L LMIHSLYSNKEIFLRELISNASDA DKLRF ++N +
Sbjct: 19 SHMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYE 78
Query: 68 DNSDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS 127
+ +L + ++FDKD RT+ ISDNG+GM R+++I +LGTIAKSGT+ F L DQ KD+
Sbjct: 79 GDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQ 138
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTNRGTDITL 187
LIGQFGVGFYSAFIVA K+ V++R GV WES G G +T+ I K +RGT+ITL
Sbjct: 139 LIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITL 198
Query: 188 YLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMYK 221
+LR E+E+L W+++SII KYSDHI+ P+++ K
Sbjct: 199 HLREGEDEFLDDWRVRSIISKYSDHIALPVEIEK 232
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90
pdb|1HK7|B Chain B, Middle Domain Of Hsp90
Length = 288
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 190/295 (64%), Gaps = 11/295 (3%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-R 305
LW R S+IT E+Y FYK IS+D+E PL H VEG+ E+ +L+IP RAP+DL++ +
Sbjct: 4 LWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESK 63
Query: 306 NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREG 365
K+N IKLYV+RVFI D+AE L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KVIR+
Sbjct: 64 KKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN 123
Query: 366 STKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNN 425
K+++ +++ ++ ++ F+ F + IK G+ ED N+ ++KLLR+ ST +
Sbjct: 124 IVKKLIEAFNEIAEDSE-----QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKS 178
Query: 426 DSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEW 485
++ SL DY+ RM E Q IYYITGE+ K+V+ SP L+ + K+ EVL LTD +DE+
Sbjct: 179 VDEL--TSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEY 236
Query: 486 MLSFIPKFENKELVSIAKGNLDLGNLENESDXXXXXXXXXXFQNLIEEMKKILSE 540
+ + +FE K LV I K D E + + ++ L + +K+IL +
Sbjct: 237 AFTQLKEFEGKTLVDITK---DFELEETDEEKAEREKEIKEYEPLTKALKEILGD 288
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 176/258 (68%), Gaps = 8/258 (3%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDLWD-R 305
LW R S+IT E+Y FYK IS+D+E PL H VEG+ E+ +L+IP RAP+DL++ +
Sbjct: 6 LWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESK 65
Query: 306 NKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVIREG 365
K+N IKLYV+RVFI D+AE L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KVIR+
Sbjct: 66 KKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN 125
Query: 366 STKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFASTNN 425
K+++ +++ ++ ++ F+ F + IK G+ ED N+ ++KLLR+ ST +
Sbjct: 126 IVKKLIEAFNEIAEDSE-----QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKS 180
Query: 426 DSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDRVDEW 485
++ SL DY+ RM E Q IYYITGE+ KSV+ SP L+ + K+ EVL LTD +DE+
Sbjct: 181 VDEL--TSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEY 238
Query: 486 MLSFIPKFENKELVSIAK 503
+ + +FE K LV I K
Sbjct: 239 AFTQLKEFEGKTLVDITK 256
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|C Chain C, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|E Chain E, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|G Chain G, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 177/262 (67%), Gaps = 8/262 (3%)
Query: 243 QASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDL 302
+ LW R S+IT E+Y FYK IS+D+E PL H VEG+ E+ +L+IP RAP+DL
Sbjct: 2 KTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDL 61
Query: 303 WD-RNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKV 361
++ + K+N IKLYV+RVFI D+AE L+P +L FVKGV+DS +LPLN+SRE+LQ+++ +KV
Sbjct: 62 FESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKV 121
Query: 362 IREGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFA 421
IR+ K+++ +++ ++ ++ F+ F + IK G+ ED N+ ++KLLR+
Sbjct: 122 IRKNIVKKLIEAFNEIAEDSE-----QFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYN 176
Query: 422 STNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDR 481
ST + ++ SL DY+ RM E Q IYYITGE+ K+V+ SP L+ + K+ EVL LTD
Sbjct: 177 STKSVDEL--TSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDP 234
Query: 482 VDEWMLSFIPKFENKELVSIAK 503
+DE+ + + +FE K LV I K
Sbjct: 235 IDEYAFTQLKEFEGKTLVDITK 256
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|B Chain B, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|C Chain C, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
Length = 268
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 178/268 (66%), Gaps = 8/268 (2%)
Query: 243 QASALWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDL 302
+ +W R +IT E+Y EFYK +++D+E L H VEG+ E+ LL+IP RAP+DL
Sbjct: 2 KTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDL 61
Query: 303 WDRNKRNGIK-LYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKV 361
++ K+ LYV+RVFIMD ++L+P YL F++GV+DS +LPLN+SRE+LQ+S+ +KV
Sbjct: 62 FENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKV 121
Query: 362 IREGSTKRILNILEDLSTSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFA 421
IR+ K+ L + +L + DKE Y F++ F + +K GI ED+ N+ R+S+LLR+
Sbjct: 122 IRKNIVKKCLELFSEL--AEDKE---NYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYH 176
Query: 422 STNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDR 481
++ + ++ SL +Y+ RMKE Q IYYITGE+ + V NS +E +K+ EV+ +T+
Sbjct: 177 TSQSGDEM--TSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEP 234
Query: 482 VDEWMLSFIPKFENKELVSIAKGNLDLG 509
+DE+ + + +F+ K LVS+ K L+L
Sbjct: 235 IDEYCVQQLKEFDGKSLVSVTKEGLELA 262
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|B Chain B, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|C Chain C, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
Length = 223
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 8/212 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ +L L+I++ YSNKEIFLRELISN+SDALDK+RFE + +K +L
Sbjct: 12 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELF 71
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I I DK T+ I D+GIGM ++D++ NLGTIA+SGT+EF L+ D S+IGQFG
Sbjct: 72 IHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAG--ADVSMIGQFG 129
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYSA++VA++++V ++H + E +WES+ G+FT+ + + RGT + LYL+
Sbjct: 130 VGFYSAYLVAERVVVTTKHNDD---EQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLK 186
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K +++++S+ IS+PI ++ E
Sbjct: 187 DDQMEYLEERRIKDLVKRHSEFISYPISLWTE 218
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
pdb|2XCM|B Chain B, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
Length = 214
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 146/210 (69%), Gaps = 8/210 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ +L L+I++ YSNKEIFLRELISN+SDALDK+RFE + +K +L
Sbjct: 9 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELF 68
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I I DK T+ I D+GIGM ++D++ NLGTIA+SGT+EF L+ D S+IGQFG
Sbjct: 69 IHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAA--GADVSMIGQFG 126
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYSA++VA++++V ++H + E +WES+ G+FT+ + + RGT + LYL+
Sbjct: 127 VGFYSAYLVAERVVVTTKHNDD---EQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLK 183
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKMY 220
+ EYL ++K +++K+S+ IS+PI ++
Sbjct: 184 DDQMEYLEERRIKDLVKKHSEFISYPISLW 213
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
Length = 223
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 144/212 (67%), Gaps = 8/212 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T F A+++ ++ L+I++ YSNKEIFLRELISNASDALDK+R+E I + + +
Sbjct: 4 ETFAFNADIRQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESITDTQKLSAEPEFF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I I DK N T+ I D+GIGM +ND+I NLGTIA+SGT+ F + D S+IGQFG
Sbjct: 64 IRIIPDKTNNTLTIEDSGIGMTKNDLINNLGTIARSGTKAFMEAIQA--SGDISMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYSA++VA ++V S++ + E +WES G+FT+ ET K RGT I L+L+
Sbjct: 122 VGFYSAYLVADHVVVISKNNDD---EQYVWESAAGGSFTVTKDETNEKLGRGTKIILHLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K +++K+S+ ISFPIK+Y E
Sbjct: 179 EDQLEYLEEKRIKDLVKKHSEFISFPIKLYCE 210
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213
pdb|3Q5J|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of 17-Dmap- Geldanamycin
pdb|3Q5K|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of An Inhibitor
pdb|3Q5L|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|B Chain B, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|C Chain C, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|D Chain D, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3U67|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp90 From
Leishmania Major(Lmjf33.0312)in Complex With Adp
Length = 231
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISNASDA DK+R++ + + + ++ L
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLC 80
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + DK+N+T+ + DNGIGM + D++ NLGTIA+SGT+ F L + D S+IGQFG
Sbjct: 81 IRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEAL--EAGGDMSMIGQFG 138
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTN--RGTDITLYLRS 191
VGFYSA++VA ++ V S++ NS E +WES G FTI + +++ RGT ITL+L+
Sbjct: 139 VGFYSAYLVADRVTVTSKN-NSD--ESYVWESSAGGTFTITSTPESDMKRGTRITLHLKE 195
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEE 227
+ EYL +LK +I+K+S+ I + I++ E E+
Sbjct: 196 DQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEK 231
>pdb|2CCS|A Chain A, Human Hsp90 With
4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3-
Yl)-Benzene-1,2-Diol
pdb|2CCT|A Chain A, Human Hsp90 With 5-(5-Chloro-2,4-Dihydroxy-Phenyl)-4-
Piperazin-1-Yl-2h-Pyrazole-3-Carboxylic Acid Ethylamide
pdb|2CCU|A Chain A, Human Hsp90 With 4-Chloro-6-(4-(4-(4-Methanesulphonyl-
Benzyl)-Pierazin-1-Yl)-1h-Pyrazol-3-Yl)-Benzene-1,3-Diol
Length = 236
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE--KERDKE--VSDDEAE 236
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 31 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 90
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 91 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 148
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 149 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 205
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 206 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 249
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg
pdb|1YER|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "closed"
Conformation
pdb|1YES|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "open"
Conformation
pdb|1YET|A Chain A, Geldanamycin Bound To The Hsp90 Geldanamycin-Binding
Domain
Length = 228
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 10 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 69
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 70 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 127
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 184
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 185 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 228
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-H64
pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water
Soluble Inhibitor Pu-h71
pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-Dz8
pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The
Hsp90 Inhibitor Pu-H54
Length = 256
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 38 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 97
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 98 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 155
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 156 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 212
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 213 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE--KERDKE--VSDDEAE 256
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-
Pent-9h-Purin-6-Ylamine
Length = 236
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE--KERDKE--VSDDEAE 236
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UY7|A Chain A, Human Hsp90-alpha With
9-butyl-8-(4-methoxy-benzyl)-9h-purin-6-ylamine
pdb|1UY8|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3-Trimethoxy-Benzyl)-9h-Purin-6ylamine
pdb|1UY9|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,
5-Ylmethyl-9-Butyl-9h-Purin-6-Ylamine
pdb|1UYC|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYD|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYE|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYF|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYG|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYH|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYK|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,5-Ylmethyl-9-But
Yl-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYL|A Chain A, Structure-Activity Relationships In Purine-Based Inhibitor
Binding To Hsp90 Isoforms
pdb|2UWD|A Chain A, Inhibition Of The Hsp90 Molecular Chaperone In Vitro And
In Vivo By Novel, Synthetic, Potent Resorcinylic
Pyrazole, Isoxazole Amide Analogs
pdb|2VCI|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2VCJ|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2WI1|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|B Chain B, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI3|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI4|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI5|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI6|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI7|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|4FCP|A Chain A, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCP|B Chain B, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCQ|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCR|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
Length = 236
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 236
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021
Length = 237
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 19 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 78
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 79 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 136
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 137 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 193
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E++++ +S++E E
Sbjct: 194 DQTEYLEERRIKEIVKKHSQFIGYPITLFV----EKERDKEVSDDEAE 237
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|B Chain B, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BYH|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BYI|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BZ5|A Chain A, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
pdb|2BZ5|B Chain B, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
Length = 235
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 17 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 76
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 77 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 134
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 135 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 191
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E++++ +S++E E
Sbjct: 192 DQTEYLEERRIKEIVKKHSQFIGYPITLFV----EKERDKEVSDDEAE 235
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE3|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE4|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE5|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE6|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE9|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEA|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEB|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEC|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YED|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEF|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|B Chain B, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEH|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 34 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 93
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 94 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 151
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 152 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 208
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 209 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 252
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE8|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEI|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEJ|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 34 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 93
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 94 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 151
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 152 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 208
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 209 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 252
>pdb|2YI0|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI5|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI6|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-
4-Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI7|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors
Length = 229
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 223
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B24|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B25|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch4675194
pdb|3B26|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B26|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B27|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro4919127
pdb|3B28|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3B28|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3VHA|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHC|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHD|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
pdb|3VHD|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
Length = 229
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 11 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 70
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 71 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 128
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 185
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 186 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 229
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With
4-Chloro-6-{[(2r)-2-
(2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1,
3-Diol
Length = 251
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 33 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 92
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 93 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 150
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 151 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 207
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 208 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 251
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide
Tetrahydro-4h-Carbazol-4-One Bound To Hsp90
pdb|3MNR|P Chain P, Crystal Structure Of Benzamide Snx-1321 Bound To Hsp90
Length = 232
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 223
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC3|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC4|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
Length = 264
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 46 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 105
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 106 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 163
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 164 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 220
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 221 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE--KERDKE--VSDDEAE 264
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A
pdb|3INX|A Chain A, Hsp90 N-Terminal Domain With Pochoxime B
Length = 228
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 10 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 69
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 70 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 127
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 184
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 185 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 228
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment
pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment.
pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04
pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And
42-C03
pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064
pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 31 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 90
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 91 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 148
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 149 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 205
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 206 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 249
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3T0H|A Chain A, Structure Insights Into Mechanisms Of Atp Hydrolysis And
The Activation Of Human Hsp90
pdb|3T0Z|A Chain A, Hsp90 N-Terminal Domain Bound To Atp
pdb|3T10|A Chain A, Hsp90 N-Terminal Domain Bound To Acp
pdb|3T1K|A Chain A, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T1K|B Chain B, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T2S|A Chain A, Hsp90 N-Terminal Domain Bound To Ags
pdb|3T2S|B Chain B, Hsp90 N-Terminal Domain Bound To Ags
Length = 228
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 10 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 69
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 70 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 127
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 184
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 185 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 228
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
pdb|3HHU|B Chain B, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
Length = 224
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 135
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 192
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 193 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 223
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3BMY|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3QTF|A Chain A, Design And Sar Of Macrocyclic Hsp90 Inhibitors With
Increased Metabolic Stability And Potent
Cell-Proliferation Activity
pdb|3R91|A Chain A, Macrocyclic Lactams As Potent Hsp90 Inhibitors With
Excellent Tumor Exposure And Extended Biomarker
Activity.
pdb|3R92|A Chain A, Discovery Of A Macrocyclic O-Aminobenzamide Hsp90
Inhibitor With Heterocyclic Tether That Shows Extended
Biomarker Activity And In Vivo Efficacy In A Mouse
Xenograft Model.
pdb|3RKZ|A Chain A, Discovery Of A Stable Macrocyclic O-Aminobenzamide Hsp90
Inhibitor Capable Of Significantly Decreasing Tumor
Volume In A Mouse Xenograft Model
Length = 226
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 67
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 68 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 125
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 126 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 182
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 183 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 226
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
(4-Hydroxyphenyl)morpholin- 4-Yl Methanone
pdb|4EGI|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
2-Amino-4-Ethylthio-6- Methyl-1,3,5-Triazine
pdb|4EGK|A Chain A, Human Hsp90-Alpha Atpase Domain Bound To Radicicol
Length = 232
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 14 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 73
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 74 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 131
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 132 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 188
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 189 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 232
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol
pdb|4EFT|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-
Cyclohexyl-2-(6-Hydroxy-1h-Indazol-3-Yl)-Propionitrile
pdb|4EFU|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
6-Hydroxy- 3-(3-Methyl-Benzyl)-1h-Indazole-5-Carboxylic
Acid Benzyl-Methyl-Amide
Length = 229
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 11 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 70
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 71 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 128
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 185
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 186 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 229
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWO|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
Length = 230
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 12 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 71
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 72 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 129
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 130 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 186
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 187 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 230
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K98|B Chain B, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K99|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|B Chain B, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|C Chain C, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|D Chain D, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
Length = 232
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 11 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 70
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 71 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 128
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 185
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 186 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 216
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKO|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3HEK|A Chain A, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3HEK|B Chain B, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3R4N|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4N|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3RLP|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLP|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLQ|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLQ|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLR|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
pdb|3RLR|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
Length = 226
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 11 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 70
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 71 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 128
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 185
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 186 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 216
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr
Length = 210
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 5 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 64
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 65 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 122
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 123 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 179
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 180 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 210
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322
pdb|2QF6|B Chain B, Hsp90 Complexed With A56322
pdb|2QF6|C Chain C, Hsp90 Complexed With A56322
pdb|2QF6|D Chain D, Hsp90 Complexed With A56322
pdb|2QG2|A Chain A, Hsp90 Complexed With A917985
pdb|3OW6|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone I
pdb|3OWB|A Chain A, Crystal Structure Of Hsp90 With Ver-49009
pdb|3OWD|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone Ii
Length = 207
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 2 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 61
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 62 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 119
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 120 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 176
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 177 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 207
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 236
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 30 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 89
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 90 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 147
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 148 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 204
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 205 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 235
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule
Fragment
Length = 218
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 13 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 72
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 73 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 130
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 131 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 187
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 188 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 218
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n-
Dimethylaminoethylamino-geldanamycin
Length = 215
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 10 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 69
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 70 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 127
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 184
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 185 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 215
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
pdb|3TUH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
Length = 209
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 3 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 62
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 63 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 120
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 121 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 177
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 178 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 208
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383
pdb|2QFO|B Chain B, Hsp90 Complexed With A143571 And A516383
pdb|2QG0|A Chain A, Hsp90 Complexed With A943037
pdb|2QG0|B Chain B, Hsp90 Complexed With A943037
Length = 207
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 2 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 61
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 62 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 119
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 120 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 176
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 177 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 207
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YJX|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK2|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKB|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKC|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKE|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKI|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKJ|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK9|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
Length = 209
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 7/211 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 4 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 64 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 122 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 178
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K I++K+S I +PI ++ E
Sbjct: 179 DQTEYLEERRIKEIVKKHSQFIGYPITLFVE 209
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XJJ|B Chain B, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 31 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 90
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 91 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 148
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H N + WES G+FT+ +T RGT + L+L+
Sbjct: 149 VGFYSAYLVAEKVTVITKH-NDDVQ--YAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 205
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S I +PI ++ E E KE +S++E E
Sbjct: 206 DQTEYLEERRIKEIVKKHSQFIGYPITLFVEK--ERDKE--VSDDEAE 249
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3
(9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine)
Length = 220
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 7/210 (3%)
Query: 15 TLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEI 74
T FQAE+ ++ L+I++ YSNKEIFLRELISNASDALDK+R+E + + +L+I
Sbjct: 13 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKI 72
Query: 75 IITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGV 134
I + RT+ + D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFGV
Sbjct: 73 DIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFGV 130
Query: 135 GFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETIN--KTNRGTDITLYLRSK 192
GFYSA++VA+K++V ++H + E WES G+FT+ + RGT + L+L+
Sbjct: 131 GFYSAYLVAEKVVVITKHNDD---EQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKED 187
Query: 193 EEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K +++K+S I +PI +Y E
Sbjct: 188 QTEYLEERRVKEVVKKHSQFIGYPITLYLE 217
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 147/228 (64%), Gaps = 11/228 (4%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDALDK+R+E + + +L
Sbjct: 34 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 93
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + +K +RT+ I D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 94 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQA--GADISMIGQFG 151
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI--ETINKTNRGTDITLYLRS 191
VGFYSA++VA+K+ V ++H + E WES G+FT+ +T RGT + L+L+
Sbjct: 152 VGFYSAYLVAEKVTVITKHNDD---EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKE 208
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEEKKETVISNNEFE 239
+ EYL ++K I++K+S +PI ++ E E KE +S++E E
Sbjct: 209 DQTEYLEERRIKEIVKKHSQFQGYPITLFVEK--ERDKE--VSDDEAE 252
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A
Pyrrolo-Pyrimidine Methoxypyridine Inhibitor
Length = 239
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 7/210 (3%)
Query: 15 TLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEI 74
T FQAE+ ++ L+I++ YSNKEIFLRELISNASDALDK+R+E + + +L+I
Sbjct: 18 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKI 77
Query: 75 IITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGV 134
I + RT+ + D GIGM + D+I NLGTIAKSGT+ F L D S+IGQFGV
Sbjct: 78 DIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAG--ADISMIGQFGV 135
Query: 135 GFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETIN--KTNRGTDITLYLRSK 192
GFYSA++VA+K++V ++H + E WES G+FT+ + RGT + L+L+
Sbjct: 136 GFYSAYLVAEKVVVITKHNDD---EQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKED 192
Query: 193 EEEYLSSWKLKSIIRKYSDHISFPIKMYKE 222
+ EYL ++K +++K+S I +PI +Y E
Sbjct: 193 QTEYLEERRVKEVVKKHSQFIGYPITLYLE 222
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
pdb|3O6O|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
Length = 214
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 7/216 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDA DK+R++ + N+ + D L
Sbjct: 4 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEPHLR 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + D+ N+T+ + D+GIGM + D++ NLGTIA+SGT+ F L + D S+IGQFG
Sbjct: 64 IRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEAL--EAGGDMSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTN--RGTDITLYLRS 191
VGFYSA++VA ++ V S++ + WES G FT+ + + RGT I L+L+
Sbjct: 122 VGFYSAYLVADRVTVVSKNNED---DAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKE 178
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEE 227
++EYL +LK +I+K+S+ I + I++ E E+
Sbjct: 179 DQQEYLEERRLKDLIKKHSEFIGYDIELMVENTTEK 214
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|C Chain C, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OMU|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
pdb|3OMU|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
Length = 231
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 7/216 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEIFLRELISN+SDA DK+R++ + N+ + D L
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEPHLR 80
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I + D+ N+T+ + D+GIGM + D++ NLGTIA+SGT+ F L + D S+IGQFG
Sbjct: 81 IRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEAL--EAGGDMSMIGQFG 138
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKTN--RGTDITLYLRS 191
VGFYSA++VA ++ V S++ + WES G FT+ + + RGT I L+L+
Sbjct: 139 VGFYSAYLVADRVTVVSKNNED---DAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKE 195
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKMYKETWDEE 227
++EYL +LK +I+K+S+ I + I++ E E+
Sbjct: 196 DQQEYLEERRLKDLIKKHSEFIGYDIELMVENTTEK 231
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1U2O|B Chain B, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1TBW|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TBW|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TC0|A Chain A, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC0|B Chain B, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC6|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1TC6|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1U0Z|A Chain A, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1U0Z|B Chain B, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1YSZ|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Neca
pdb|1YT0|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Adp
pdb|1YT1|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|1YT1|B Chain B, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|2EXL|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2EXL|B Chain B, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2FYP|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2FYP|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2GFD|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GFD|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GQP|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2GQP|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2HCH|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2HCH|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2H8M|A Chain A, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2H8M|B Chain B, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2HG1|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|2HG1|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|3O2F|A Chain A, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
pdb|3O2F|B Chain B, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
Length = 236
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 148/231 (64%), Gaps = 18/231 (7%)
Query: 11 KKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNS 70
+K + FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N
Sbjct: 7 EKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNE 66
Query: 71 DLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS--- 127
+L + I DK+ ++++D G+GM R +++ NLGTIAKSGT EF +K++ Q+ S
Sbjct: 67 ELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSE 126
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTD 184
LIGQFGVGFYSAF+VA K+IV S+H N +WES+ S F++ N RGT
Sbjct: 127 LIGQFGVGFYSAFLVADKVIVTSKHNNDTQH---IWESD-SNEFSVIADPRGNTLGRGTT 182
Query: 185 ITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY--------KETWDEE 227
ITL L+ + +YL +K++++KYS I+FPI ++ K WD E
Sbjct: 183 ITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVWDWE 233
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex
With The Novel Ligand N-Propyl Carboxyamido Adenosine
pdb|1YT2|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n Apo Crystal
Length = 273
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 144/216 (66%), Gaps = 10/216 (4%)
Query: 11 KKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNS 70
+K + FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N
Sbjct: 7 EKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNE 66
Query: 71 DLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS--- 127
+L + I DK+ ++++D G+GM R +++ NLGTIAKSGT EF +K++ Q+ S
Sbjct: 67 ELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSE 126
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTD 184
LIGQFGVGFYSAF+VA K+IV S+H N +WES+ S F++ N RGT
Sbjct: 127 LIGQFGVGFYSAFLVADKVIVTSKHNNDTQH---IWESD-SNEFSVIADPRGNTLGRGTT 182
Query: 185 ITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY 220
ITL L+ + +YL +K++++KYS I+FPI ++
Sbjct: 183 ITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVW 218
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90
Chaperone Grp94 In Complex With The Specific Ligand Neca
pdb|1QY8|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With Radicicol
pdb|1QYE|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With 2-chlorodideoxyadenosine
Length = 269
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 144/216 (66%), Gaps = 10/216 (4%)
Query: 11 KKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNS 70
+K + FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N
Sbjct: 3 EKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNE 62
Query: 71 DLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS--- 127
+L + I DK+ ++++D G+GM R +++ NLGTIAKSGT EF +K++ Q+ S
Sbjct: 63 ELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSE 122
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTD 184
LIGQFGVGFYSAF+VA K+IV S+H N +WES+ S F++ N RGT
Sbjct: 123 LIGQFGVGFYSAFLVADKVIVTSKHNNDTQH---IWESD-SNEFSVIADPRGNTLGRGTT 178
Query: 185 ITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY 220
ITL L+ + +YL +K++++KYS I+FPI ++
Sbjct: 179 ITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVW 214
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90
pdb|4GQT|B Chain B, N-Terminal Domain Of C. Elegans Hsp90
Length = 227
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 137/208 (65%), Gaps = 7/208 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I++ YSNKEI+LRELISNASDALDK+R++ + +L
Sbjct: 9 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 68
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT +K+ +T+ I D GIGM + D++ NLGTIAKSGT+ F L D S+IGQFG
Sbjct: 69 IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG--ADISMIGQFG 126
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETIN--KTNRGTDITLYLRS 191
VGFYSAF+VA K++V S++ + + WES G+F + N + RGT I ++++
Sbjct: 127 VGFYSAFLVADKVVVTSKNNDD---DSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKE 183
Query: 192 KEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ ++L K+K I++K+S I +PIK+
Sbjct: 184 DQIDFLEERKIKEIVKKHSQFIGYPIKL 211
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of
Mutants 168- 169 Ks-Aa
Length = 236
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 147/231 (63%), Gaps = 18/231 (7%)
Query: 11 KKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNS 70
+K + FQAEV +++L+I+SLY NKEIFLRELISNASDALDK+R + ++ N
Sbjct: 7 EKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNE 66
Query: 71 DLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDAS--- 127
+L + I DK+ ++++D G+GM R +++ NLGTIA +GT EF +K++ Q+ S
Sbjct: 67 ELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAAAGTSEFLNKMTEAQEDGQSTSE 126
Query: 128 LIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTD 184
LIGQFGVGFYSAF+VA K+IV S+H N +WES+ S F++ N RGT
Sbjct: 127 LIGQFGVGFYSAFLVADKVIVTSKHNNDTQH---IWESD-SNEFSVIADPRGNTLGRGTT 182
Query: 185 ITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKMY--------KETWDEE 227
ITL L+ + +YL +K++++KYS I+FPI ++ K WD E
Sbjct: 183 ITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVWDWE 233
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90
Chaperone In Complex With Geldanamycin
Length = 230
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 143/222 (64%), Gaps = 8/222 (3%)
Query: 1 MKNSEPESIIKKKQTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELI 60
M+ S +T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +
Sbjct: 1 MRGSHHHHHHMASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSL 60
Query: 61 NNKFISTDNSDLEIIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSG 120
++ DL I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS
Sbjct: 61 SDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSA 120
Query: 121 DQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETIN 177
D S+IGQFGVGFYS F+VA ++ V S+ + E +WES G+FT+ E
Sbjct: 121 G--ADVSMIGQFGVGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNE 175
Query: 178 KTNRGTDITLYLRSKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ RGT + L+L+ + EYL ++K +I+++S+ +++PI++
Sbjct: 176 RIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQL 217
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH8|B Chain B, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH6|A Chain A, Structure Of The Tetragonal Form Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
Length = 220
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2BRE|B Chain B, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2VWC|A Chain A, Structure Of The Hsp90 Inhibitor Macbecin Bound To The N-
Terminus Of Yeast Hsp90
Length = 219
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The
N- Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 15 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 74
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 75 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 132
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 133 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 189
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+K+S+ +++PI++
Sbjct: 190 DDQLEYLEEKRIKEVIKKHSEFVAYPIQL 218
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50
pdb|2BRC|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2IWS|A Chain A, Radicicol Analogues Bound To The Atp Site Of Hsp90
pdb|2IWU|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90
pdb|2IWX|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90.
pdb|1AMW|A Chain A, Adp Binding Site In The Hsp90 Molecular Chaperone
pdb|2VW5|A Chain A, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|B Chain B, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|C Chain C, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|D Chain D, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2XD6|A Chain A, Hsp90 Complexed With A Resorcylic Acid Macrolactone.
pdb|2XX4|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX5|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
8-(6-Bromo-
Benzo[1,
3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)-
Adenine
pdb|1ZWH|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radester Amine
pdb|2FXS|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radamide
Length = 240
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 83
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 84 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 141
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 142 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 198
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 199 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 227
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|B Chain B, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|C Chain C, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|D Chain D, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone
Length = 213
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 3 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 62
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 63 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 120
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 121 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 177
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 178 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 206
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 15 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 74
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 75 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 132
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 133 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 189
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 190 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 218
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp
pdb|2WEQ|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Geldanamycin
pdb|2WER|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
pdb|2WER|B Chain B, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
Length = 220
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRE++SNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 140/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I N+GTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAEVINNIGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ + S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQMISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99
Ks- Aa
pdb|3C11|A Chain A, Yeast Hsp82 N-Terminal Domain-Geldanamycin Complex:
Effects Of Mutants 98-99 Ks-Aa
Length = 240
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 139/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 83
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIA +GT+ F LS D S+IGQFG
Sbjct: 84 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAAAGTKAFMEALSAG--ADVSMIGQFG 141
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 142 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 198
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 199 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 227
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 139/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALD++R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDRIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + ++I NLGTIA SGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIANSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 138/209 (66%), Gaps = 8/209 (3%)
Query: 14 QTLGFQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLE 73
+T FQAE+ ++ L+I+++YSNKEIFLRELISNASDALDK+R++ +++ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 74 IIITFDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFG 133
I IT + + + I D+GIGM + +I LGTIAKSGT+ F LS D S+IGQFG
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAGLINLLGTIAKSGTKAFMEALSAG--ADVSMIGQFG 121
Query: 134 VGFYSAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLR 190
VGFYS F+VA ++ V S+ + E +WES G+FT+ E + RGT + L+L+
Sbjct: 122 VGFYSLFLVADRVQVISKSNDD---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 178
Query: 191 SKEEEYLSSWKLKSIIRKYSDHISFPIKM 219
+ EYL ++K +I+++S+ +++PI++
Sbjct: 179 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
pdb|1Y6Z|B Chain B, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
Length = 263
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 158/266 (59%), Gaps = 15/266 (5%)
Query: 247 LWARGKSEITDEQYIEFYKHISHDFEKPLIYTHNHVEGRNEYIQLLYIPSRAPYDL---- 302
+W + + +T+ Y FYK+ ++ PL Y H +VEG+ + +LYIP P++L
Sbjct: 6 IWKQDEKSLTENDYYSFYKNTFKAYDDPLAYVHFNVEGQISFNSILYIPGSLPWELSKNM 65
Query: 303 WDRNKRNGIKLYVKRVFIMDDAEQLLPTYLRFVKGVIDSNNLPLNVSREILQESRDVKVI 362
+D R GI+LYVKRVFI D + +P +L F++G++DS NLPLNV REILQ+S+ + +I
Sbjct: 66 FDEESR-GIRLYVKRVFINDKFSESIPRWLTFLRGIVDSENLPLNVGREILQKSKMLSII 124
Query: 363 REGSTKRILNILEDL-STSNDKEKIIKYANFWKEFGQVIKEGIGEDNNNKERISKLLRFA 421
+ + +++++ L T D K+ F FG+ +K G+ ED N+E I+ L+ F
Sbjct: 125 NKRIVLKSISMMKGLKETGGD-----KWTKFLNTFGKYLKIGVVEDKENQEEIASLVEFY 179
Query: 422 STNNDSDIQNVSLMDYIKRMKEGQNKIYYITGENYKSVKNSPHLEIFQKKSIEVLLLTDR 481
S N S + L YI+ MKE Q IYYI+GEN K+ +NSP LE + + +VL +
Sbjct: 180 SIN--SGDKKTDLDSYIENMKEDQKCIYYISGENKKTAQNSPSLEKLKALNYDVLFSLEP 237
Query: 482 VDEWMLSFIP--KFENKELVSIAKGN 505
+DE+ LS + K++ E++ + K +
Sbjct: 238 IDEFCLSSLTVNKYKGYEVLDVNKAD 263
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
pdb|3PEJ|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
Length = 281
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 134/208 (64%), Gaps = 7/208 (3%)
Query: 18 FQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEIIIT 77
+Q EV ++ ++++SLY+ KE+FLRELISNA+DAL+K+RF ++++ + + LEI I+
Sbjct: 28 YQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRIS 87
Query: 78 FDKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFY 137
+K+ ++I+D GIGM + D+I NLGTIAKSGT F +S D SLIGQFGVGFY
Sbjct: 88 ANKEKNILSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAIS-KSGGDMSLIGQFGVGFY 146
Query: 138 SAFIVAKKIIVKSRHVNSPITEGVLWESEGSGNFTIETINKT---NRGTDITLYLRSKEE 194
SAF+VA K+IV +++ + E +WES FTI + RGT I+L+L+
Sbjct: 147 SAFLVADKVIVYTKNNDD---EQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDAT 203
Query: 195 EYLSSWKLKSIIRKYSDHISFPIKMYKE 222
L+ KL +I KYS I FPI + E
Sbjct: 204 NLLNDKKLMDLISKYSQFIQFPIYLLHE 231
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 150/249 (60%), Gaps = 49/249 (19%)
Query: 18 FQAEVKPVLQLMIHSLYSNKEIFLRELISNASDALDKLRFELINNKFI------------ 65
F+AEV V+ ++++SLY++K++FLRELISNASDA DK R L NNK I
Sbjct: 29 FKAEVNKVMDIIVNSLYTDKDVFLRELISNASDACDKKRIILENNKLIKDAEVVTNEEIK 88
Query: 66 -------------STDNSD-----------LEIIITFDKDNRTINISDNGIGMNRNDIIT 101
STD + L I I DK+ +T+ I+DNGIGM+++++I
Sbjct: 89 NETEKEKTENVNESTDKKENVEEEKNDIKKLIIKIKPDKEKKTLTITDNGIGMDKSELIN 148
Query: 102 NLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGV 161
NLGTIA+SGT +F ++ + K D++LIGQFGVGFYS+F+V+ ++ V ++ +
Sbjct: 149 NLGTIAQSGTAKFLKQIE-EGKADSNLIGQFGVGFYSSFLVSNRVEVYTKKEDQIYR--- 204
Query: 162 LWESEGSGNFTIETINKTNR--------GTDITLYLRSKEEEYLSSWKLKSIIRKYSDHI 213
W S+ G+F++ I K ++ GT I L+L+ + +EYL +KLK +I+KYS+ I
Sbjct: 205 -WSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEECDEYLEDYKLKELIKKYSEFI 263
Query: 214 SFPIKMYKE 222
FPI+++ E
Sbjct: 264 KFPIEIWSE 272
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant
pdb|2AKP|B Chain B, Hsp90 Delta24-n210 Mutant
Length = 186
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 124/188 (65%), Gaps = 8/188 (4%)
Query: 35 SNKEIFLRELISNASDALDKLRFELINNKFISTDNSDLEIIITFDKDNRTINISDNGIGM 94
SNKEIFLRELISNASDALDK+R++ +++ DL I IT + + + I D+GIGM
Sbjct: 1 SNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGM 60
Query: 95 NRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVN 154
+ ++I NLGTIAKSGT+ F LS D S+IGQFGVGFYS F+VA ++ V S+ +
Sbjct: 61 TKAELINNLGTIAKSGTKAFMEALSAG--ADVSMIGQFGVGFYSLFLVADRVQVISKSND 118
Query: 155 SPITEGVLWESEGSGNFTI---ETINKTNRGTDITLYLRSKEEEYLSSWKLKSIIRKYSD 211
E +WES G+FT+ E + RGT + L+L+ + EYL ++K +I+++S+
Sbjct: 119 D---EQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSE 175
Query: 212 HISFPIKM 219
+++PI++
Sbjct: 176 FVAYPIQL 183
>pdb|1SF8|A Chain A, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|B Chain B, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|C Chain C, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|D Chain D, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|E Chain E, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|F Chain F, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|G Chain G, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|H Chain H, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
Length = 126
Score = 102 bits (253), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 529 NLIEEMKKILSEKAKDVRVTYRLTDSPACLVVDENEPSGNMIRMLKAAGQETPNSKPILE 588
+ I+ +K +L E+ KDVR+T+RLTD+PA + D +E S ++ AAGQ+ P K I E
Sbjct: 12 SFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEXSTQXAKLFAAAGQKVPEVKYIFE 71
Query: 589 INPNHALIQRIQLNND--NIHNWSHILFDQALLAENGVLNDPMNFVKRLNEMLL 640
+NP+H L++R D W +L DQALLAE G L DP F++R N++L+
Sbjct: 72 LNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRXNQLLV 125
>pdb|3R0S|A Chain A, Udp-N-Acetylglucosamine Acyltransferase From Campylobacter
Jejuni
Length = 266
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 220 YKETWDEEKKETVISNN----EFEVINQASALWARGKSEITDEQYIEFYKHISHD 270
YKE E+K VI N EF IN +A G + I D +I Y HI+HD
Sbjct: 76 YKE---EQKSGVVIGKNATIREFATINSGTA-KGDGFTRIGDNAFIXAYCHIAHD 126
>pdb|1Z5A|A Chain A, Topoisomerase Vi-B, Adp-Bound Dimer Form
pdb|1Z5A|B Chain B, Topoisomerase Vi-B, Adp-Bound Dimer Form
pdb|1Z5B|A Chain A, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
pdb|1Z5B|B Chain B, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
pdb|2HKJ|A Chain A, Topoisomerase Vi-B Bound To Radicicol
Length = 469
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 46 SNASDALDKLRFELINNKFISTDN----SDLEIIITFDKDNRTI---NISDNGIGMNRND 98
N + AL + ELI N +TD +++I I D R I N+ DNGIG+ +
Sbjct: 25 PNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQE 84
Query: 99 IITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNS 155
+ G + S SK Q + +G YS K I +++ VNS
Sbjct: 85 VPNAFGRVLYS------SKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNS 135
>pdb|1MU5|A Chain A, Structure Of Topoisomerase Subunit
Length = 471
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 46 SNASDALDKLRFELINNKFISTDN----SDLEIIITFDKDNRTI---NISDNGIGMNRND 98
N + AL + ELI N +TD +++I I D R I N+ DNGIG+ +
Sbjct: 27 PNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQE 86
Query: 99 IITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNS 155
+ G + S SK Q + +G YS K I +++ VNS
Sbjct: 87 VPNAFGRVLYS------SKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNS 137
>pdb|2ZBK|B Chain B, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|D Chain D, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|F Chain F, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|H Chain H, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
Length = 530
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 47 NASDALDKLRFELINNKFISTDN----SDLEIIITFDKDNRTI---NISDNGIGMNRNDI 99
N + AL + ELI N +TD +++I I D R I N+ DNGIG+ ++
Sbjct: 27 NPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEV 86
Query: 100 ITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVAKKIIVKSRHVNS 155
G + S SK Q + +G YS K I +++ VNS
Sbjct: 87 PNAFGRVLYS------SKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNS 136
>pdb|1Z7S|1 Chain 1, The Crystal Structure Of Coxsackievirus A21
Length = 298
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 261 IEFYKHISHDFEKPLIYTHNHV-----EGRNEYIQLLYIPSRAPY-DLWD 304
+EF+ + D E ++T N+ E RN+ Q++YIP AP WD
Sbjct: 117 LEFFTYSRFDLEMTFVFTENYPSTASGEVRNQVYQIMYIPPGAPRPSSWD 166
>pdb|1Z59|A Chain A, Topoisomerase Vi-B, Adp-Bound Monomer Form
pdb|1Z5C|A Chain A, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
pdb|1Z5C|B Chain B, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
Length = 469
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 46 SNASDALDKLRFELINNKFISTDN----SDLEIIITFDKDNRTI---NISDNGIGMNRND 98
N + AL + ELI N +TD +++I I D R I N+ DNGIG+ +
Sbjct: 25 PNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQE 84
Query: 99 IITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVA-----KKIIVKSRHV 153
+ G + S SK Q + G +G+G +A + + K I +++ V
Sbjct: 85 VPNAFGRVLYS------SKYVNRQTR-----GXYGLGVKAAVLYSQXHQDKPIEIETSPV 133
Query: 154 NS 155
NS
Sbjct: 134 NS 135
>pdb|1Z7Z|1 Chain 1, Cryo-Em Structure Of Human Coxsackievirus A21 Complexed
With Five Domain Icam-1kilifi
Length = 286
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 261 IEFYKHISHDFEKPLIYTHNHV-----EGRNEYIQLLYIPSRAPY-DLWD 304
+EF+ + D E ++T N+ E RN+ Q++YIP AP WD
Sbjct: 117 LEFFTYSRFDLEMTFVFTENYPSTASGEVRNQVYQIMYIPPGAPRPSSWD 166
>pdb|1MX0|A Chain A, Structure Of Topoisomerase Subunit
pdb|1MX0|B Chain B, Structure Of Topoisomerase Subunit
pdb|1MX0|C Chain C, Structure Of Topoisomerase Subunit
pdb|1MX0|D Chain D, Structure Of Topoisomerase Subunit
pdb|1MX0|E Chain E, Structure Of Topoisomerase Subunit
pdb|1MX0|F Chain F, Structure Of Topoisomerase Subunit
Length = 472
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 46 SNASDALDKLRFELINNKFISTDN----SDLEIIITFDKDNRTI---NISDNGIGMNRND 98
N + AL + ELI N +TD +++I I D R I N+ DNGIG+ +
Sbjct: 28 PNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQE 87
Query: 99 IITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYSAFIVA-----KKIIVKSRHV 153
+ G + S SK Q + G +G+G +A + + K I +++ V
Sbjct: 88 VPNAFGRVLYS------SKYVNRQTR-----GXYGLGVKAAVLYSQXHQDKPIEIETSPV 136
Query: 154 NS 155
NS
Sbjct: 137 NS 138
>pdb|2GIY|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Hsv-1 Ge
Ectodomain
pdb|2GIY|B Chain B, Crystal Structure Of The C-Terminal Domain Of The Hsv-1 Ge
Ectodomain
Length = 191
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 603 NDNIHNWSHILFDQALLAENGVLNDPMNFVKR 634
ND+IH W HI A N V+ P++ R
Sbjct: 153 NDHIHAWGHITISTAAQYRNAVVEQPLDIEGR 184
>pdb|2V8J|A Chain A, Structure Of A Family 2 Pectate Lyase In Complex With A
Transition Metal
Length = 535
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 125 DASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWES---EGSGNFTIETINKTNR 181
D+ +F GF++A + +I+ SRH G LWES + F + ++ N
Sbjct: 141 DSDATARFIRGFWNAHVYDWRILETSRHGEYGKPMGALWESKFEQQPPFFATKGLSFLNA 200
Query: 182 GTDI----TLYLRSKEEEYLSSW 200
G D+ +L + ++++ +W
Sbjct: 201 GNDLIYSASLLYKHQQDQGALTW 223
>pdb|2V8I|A Chain A, Structure Of A Family 2 Pectate Lyase In A Native Form
pdb|2V8K|A Chain A, Structure Of A Family 2 Pectate Lyase In Complex With
Trigalacturonic Acid
Length = 543
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 125 DASLIGQFGVGFYSAFIVAKKIIVKSRHVNSPITEGVLWES---EGSGNFTIETINKTNR 181
D+ +F GF++A + +I+ SRH G LWES + F + ++ N
Sbjct: 142 DSDATARFIRGFWNAHVYDWRILETSRHGEYGKPMGALWESKFEQQPPFFATKGLSFLNA 201
Query: 182 GTDI----TLYLRSKEEEYLSSW 200
G D+ +L + ++++ +W
Sbjct: 202 GNDLIYSASLLYKHQQDQGALTW 224
>pdb|2GJ7|F Chain F, Crystal Structure Of A Ge-GiFC COMPLEX
pdb|2GJ7|E Chain E, Crystal Structure Of A Ge-GiFC COMPLEX
Length = 401
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 588 EINPNHA-LIQRIQLNNDNIHNWSHILFDQALLAENGVLNDPM 629
+ +P H+ L + ND+IH W HI A N V+ P+
Sbjct: 328 DASPQHSGLYLCVVYVNDHIHAWGHITISTAAQYRNAVVEQPL 370
>pdb|2KFU|A Chain A, Pknb-Phosphorylated Rv1827
Length = 162
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 79 DKDNRTINISDNGIGMNRNDIITNLGTIAKSGTQEFFSKLSGDQKKDASLIGQFGVGFYS 138
+KD + ++ + R D ++ L A++GT+ S + G A L+ + G S
Sbjct: 9 EKDQTSDEVTVETXSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGS 68
Query: 139 AFIVAKKIIVKSRHVNSPI 157
F++ + I RH +S I
Sbjct: 69 RFLLDQAITSAGRHPDSDI 87
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,815,082
Number of Sequences: 62578
Number of extensions: 821089
Number of successful extensions: 2557
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2208
Number of HSP's gapped (non-prelim): 115
length of query: 642
length of database: 14,973,337
effective HSP length: 105
effective length of query: 537
effective length of database: 8,402,647
effective search space: 4512221439
effective search space used: 4512221439
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)