Query psy2392
Match_columns 1165
No_of_seqs 645 out of 6921
Neff 6.4
Searched_HMMs 13730
Date Fri Aug 16 23:52:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2392.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2392hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g41a_ c.37.1.20 (A:) HslU {H 100.0 3.5E-63 2.6E-67 583.3 21.3 437 171-610 2-442 (443)
2 d1g41a_ c.37.1.20 (A:) HslU {H 100.0 2.8E-60 2E-64 558.6 20.3 390 769-1163 2-394 (443)
3 d1um8a_ c.37.1.20 (A:) ClpX {H 100.0 5.1E-46 3.7E-50 427.3 19.0 289 172-601 6-362 (364)
4 d1ofha_ c.37.1.20 (A:) HslU {H 100.0 7.9E-44 5.8E-48 401.4 18.0 304 171-610 2-308 (309)
5 d1um8a_ c.37.1.20 (A:) ClpX {H 100.0 3.1E-40 2.3E-44 378.9 15.7 252 771-1163 7-323 (364)
6 d1ofha_ c.37.1.20 (A:) HslU {H 100.0 1.6E-38 1.2E-42 357.9 14.5 259 769-1163 2-260 (309)
7 d1r6bx3 c.37.1.20 (X:437-751) 100.0 2.2E-32 1.6E-36 308.2 22.8 238 171-578 10-280 (315)
8 d1qvra3 c.37.1.20 (A:536-850) 100.0 8.5E-32 6.2E-36 303.2 18.4 246 163-578 2-285 (315)
9 d1r6bx3 c.37.1.20 (X:437-751) 99.9 2.9E-27 2.1E-31 266.1 20.1 227 768-1159 9-268 (315)
10 d1qvra3 c.37.1.20 (A:536-850) 99.9 8.5E-27 6.2E-31 262.1 16.3 228 768-1160 10-274 (315)
11 d1r6bx2 c.37.1.20 (X:169-436) 99.9 9.5E-26 6.9E-30 246.8 17.3 96 623-722 142-244 (268)
12 d1qvra2 c.37.1.20 (A:149-535) 99.9 4.4E-26 3.2E-30 262.2 12.1 96 623-723 146-248 (387)
13 d1qvra2 c.37.1.20 (A:149-535) 99.9 2.3E-26 1.7E-30 264.5 2.7 114 8-127 128-250 (387)
14 d1r6bx2 c.37.1.20 (X:169-436) 99.9 2.3E-24 1.7E-28 235.8 9.5 114 7-124 122-244 (268)
15 d1lv7a_ c.37.1.20 (A:) AAA dom 99.8 4.5E-21 3.3E-25 209.0 18.0 215 183-574 12-229 (256)
16 d1ixza_ c.37.1.20 (A:) AAA dom 99.8 6.7E-21 4.9E-25 206.7 15.1 215 183-574 9-226 (247)
17 d1lv7a_ c.37.1.20 (A:) AAA dom 99.8 1.1E-19 8E-24 197.9 19.3 179 780-1114 11-192 (256)
18 d1ixza_ c.37.1.20 (A:) AAA dom 99.8 4.4E-20 3.2E-24 200.2 13.4 174 780-1114 8-189 (247)
19 d1in4a2 c.37.1.20 (A:17-254) H 99.8 1.2E-18 8.4E-23 186.4 18.0 139 419-598 86-232 (238)
20 d1e32a2 c.37.1.20 (A:201-458) 99.8 1.5E-18 1.1E-22 189.2 14.5 213 183-573 4-218 (258)
21 d1e32a2 c.37.1.20 (A:201-458) 99.7 1.3E-18 9.2E-23 189.7 11.1 178 780-1114 3-182 (258)
22 d1in4a2 c.37.1.20 (A:17-254) H 99.7 1.9E-18 1.4E-22 184.6 12.1 187 770-1150 3-197 (238)
23 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 7.3E-18 5.4E-22 180.3 16.3 139 419-598 87-233 (239)
24 d1r7ra3 c.37.1.20 (A:471-735) 99.7 4.7E-18 3.4E-22 185.9 11.2 216 183-574 7-225 (265)
25 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 2.4E-17 1.7E-21 176.3 14.9 183 781-1151 9-199 (239)
26 d1d2na_ c.37.1.20 (A:) Hexamer 99.7 8.2E-17 6E-21 174.1 17.1 216 178-573 4-221 (246)
27 d1d2na_ c.37.1.20 (A:) Hexamer 99.7 4.9E-17 3.6E-21 175.8 13.9 181 777-1116 5-187 (246)
28 d1r7ra3 c.37.1.20 (A:471-735) 99.7 9E-18 6.5E-22 183.7 5.9 180 780-1114 6-188 (265)
29 d1jbka_ c.37.1.20 (A:) ClpB, A 99.6 6.8E-17 5E-21 167.6 8.0 49 624-676 147-195 (195)
30 d1njfa_ c.37.1.20 (A:) delta p 99.6 1.2E-15 8.5E-20 163.8 17.4 124 419-598 115-238 (239)
31 d1sxjc2 c.37.1.20 (C:12-238) R 99.6 2.6E-16 1.9E-20 166.7 10.9 128 419-598 99-226 (227)
32 d1iqpa2 c.37.1.20 (A:2-232) Re 99.6 1.6E-15 1.2E-19 161.0 15.1 107 419-574 109-215 (231)
33 d1sxjb2 c.37.1.20 (B:7-230) Re 99.6 3.3E-15 2.4E-19 158.1 16.4 108 419-575 101-208 (224)
34 d1sxjd2 c.37.1.20 (D:26-262) R 99.6 1E-15 7.6E-20 162.4 10.7 128 419-597 108-235 (237)
35 d1njfa_ c.37.1.20 (A:) delta p 99.6 2.7E-15 1.9E-19 160.9 11.8 91 1019-1150 117-207 (239)
36 d1sxjc2 c.37.1.20 (C:12-238) R 99.6 1.6E-15 1.1E-19 160.6 9.8 92 1019-1151 101-192 (227)
37 d1sxjb2 c.37.1.20 (B:7-230) Re 99.6 1.8E-15 1.3E-19 160.2 10.2 92 1018-1150 102-193 (224)
38 d1iqpa2 c.37.1.20 (A:2-232) Re 99.6 3.8E-15 2.8E-19 158.1 12.3 93 1017-1150 109-201 (231)
39 d1w44a_ c.37.1.11 (A:) NTPase 99.5 5.1E-16 3.7E-20 172.9 1.0 140 219-516 124-271 (321)
40 d1w44a_ c.37.1.11 (A:) NTPase 99.5 1.4E-15 9.9E-20 169.4 0.7 140 817-1114 124-271 (321)
41 d1sxjd2 c.37.1.20 (D:26-262) R 99.5 9.8E-15 7.1E-19 154.7 6.0 92 1018-1150 109-200 (237)
42 d1sxja2 c.37.1.20 (A:295-547) 99.5 1.2E-13 8.4E-18 147.9 14.0 73 183-256 14-90 (253)
43 d1sxja2 c.37.1.20 (A:295-547) 99.5 4.9E-14 3.5E-18 150.9 10.4 86 765-855 3-91 (253)
44 d1sxje2 c.37.1.20 (E:4-255) Re 99.4 3.7E-13 2.7E-17 143.7 14.1 108 419-574 131-238 (252)
45 d1w5sa2 c.37.1.20 (A:7-293) CD 99.4 6.5E-13 4.7E-17 142.8 11.7 152 419-598 132-285 (287)
46 d1sxje2 c.37.1.20 (E:4-255) Re 99.4 4.7E-13 3.4E-17 142.9 9.8 93 1018-1150 132-224 (252)
47 d1a5ta2 c.37.1.20 (A:1-207) de 99.3 3.9E-12 2.9E-16 133.3 15.7 98 419-570 108-205 (207)
48 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 6.5E-14 4.7E-18 144.9 0.9 65 9-78 129-195 (195)
49 d1fnna2 c.37.1.20 (A:1-276) CD 99.3 5.9E-12 4.3E-16 134.4 14.5 148 419-600 124-273 (276)
50 d1a5ta2 c.37.1.20 (A:1-207) de 99.3 2.1E-11 1.5E-15 127.6 14.7 87 1018-1150 109-195 (207)
51 d1g8pa_ c.37.1.20 (A:) ATPase 99.2 2.6E-11 1.9E-15 135.6 15.4 132 419-570 127-278 (333)
52 d1g8pa_ c.37.1.20 (A:) ATPase 99.2 2.1E-11 1.5E-15 136.4 12.5 120 1017-1152 127-266 (333)
53 d1fnna2 c.37.1.20 (A:1-276) CD 99.1 3.2E-10 2.3E-14 120.6 15.9 64 781-852 16-83 (276)
54 d1w5sa2 c.37.1.20 (A:7-293) CD 99.1 8.9E-11 6.5E-15 125.8 11.5 112 1017-1151 132-245 (287)
55 d1ny5a2 c.37.1.20 (A:138-384) 99.0 9.5E-10 6.9E-14 118.0 14.4 130 419-575 94-231 (247)
56 d1ny5a2 c.37.1.20 (A:138-384) 98.9 1.8E-09 1.3E-13 115.7 12.8 116 1017-1152 94-217 (247)
57 d2gnoa2 c.37.1.20 (A:11-208) g 98.8 1.1E-08 7.8E-13 106.0 12.2 61 419-507 79-139 (198)
58 d1l8qa2 c.37.1.20 (A:77-289) C 98.7 2.3E-08 1.7E-12 104.7 13.2 109 419-573 97-210 (213)
59 d1l8qa2 c.37.1.20 (A:77-289) C 98.6 9.8E-08 7.1E-12 99.7 12.1 95 1017-1148 97-196 (213)
60 d2gnoa2 c.37.1.20 (A:11-208) g 98.6 8.3E-08 6E-12 99.2 11.0 60 1018-1105 80-139 (198)
61 d1svma_ c.37.1.20 (A:) Papillo 98.6 1.1E-08 7.7E-13 115.5 4.3 43 816-858 154-196 (362)
62 d1gvnb_ c.37.1.21 (B:) Plasmid 98.3 2.1E-07 1.5E-11 98.8 6.9 41 815-855 31-71 (273)
63 d1gvnb_ c.37.1.21 (B:) Plasmid 98.3 3.3E-07 2.4E-11 97.3 6.8 40 217-256 31-70 (273)
64 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.2 9.3E-06 6.8E-10 85.2 16.6 56 183-256 12-67 (283)
65 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.2 4.7E-06 3.4E-10 87.6 12.7 57 781-855 12-68 (283)
66 d1svma_ c.37.1.20 (A:) Papillo 98.1 1.5E-06 1.1E-10 97.7 6.3 77 173-261 121-197 (362)
67 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 1.1E-05 7.9E-10 77.7 3.9 30 817-846 3-32 (169)
68 d1lw7a2 c.37.1.1 (A:220-411) T 97.6 5.7E-06 4.1E-10 81.5 1.8 40 816-855 7-46 (192)
69 d1lw7a2 c.37.1.1 (A:220-411) T 97.6 6.6E-06 4.8E-10 81.0 2.0 40 218-257 7-46 (192)
70 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 9.1E-06 6.6E-10 78.2 2.8 33 219-251 3-35 (169)
71 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 2.5E-05 1.8E-09 76.2 2.9 30 817-846 5-34 (173)
72 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 2.6E-05 1.9E-09 76.1 2.8 31 219-249 5-35 (173)
73 d2iyva1 c.37.1.2 (A:2-166) Shi 97.4 3.1E-05 2.3E-09 76.3 3.1 31 220-250 3-33 (165)
74 d2iyva1 c.37.1.2 (A:2-166) Shi 97.4 3.2E-05 2.3E-09 76.3 3.2 31 818-848 3-33 (165)
75 d1viaa_ c.37.1.2 (A:) Shikimat 97.4 2.9E-05 2.1E-09 76.5 2.8 32 817-848 1-32 (161)
76 d1viaa_ c.37.1.2 (A:) Shikimat 97.3 3.4E-05 2.5E-09 76.0 2.7 31 220-250 2-32 (161)
77 d1e6ca_ c.37.1.2 (A:) Shikimat 97.3 3.8E-05 2.8E-09 76.1 3.0 32 219-250 3-34 (170)
78 d1e6ca_ c.37.1.2 (A:) Shikimat 97.3 4E-05 2.9E-09 75.9 3.1 32 817-848 3-34 (170)
79 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.3 4.6E-05 3.4E-09 74.6 3.2 37 817-853 5-41 (176)
80 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.2 5.5E-05 4E-09 74.1 2.9 36 219-254 5-40 (176)
81 d1qhxa_ c.37.1.3 (A:) Chloramp 97.2 0.00012 8.5E-09 71.4 5.2 35 816-850 3-37 (178)
82 d1qhxa_ c.37.1.3 (A:) Chloramp 97.2 0.00011 8.2E-09 71.5 4.9 35 218-252 3-37 (178)
83 d1knqa_ c.37.1.17 (A:) Glucona 97.1 9.1E-05 6.6E-09 72.3 3.5 33 218-250 6-38 (171)
84 d1knqa_ c.37.1.17 (A:) Glucona 97.1 9.5E-05 6.9E-09 72.2 3.5 32 816-847 6-37 (171)
85 d1y63a_ c.37.1.1 (A:) Probable 97.1 0.00017 1.2E-08 70.4 4.8 27 816-842 5-31 (174)
86 d1y63a_ c.37.1.1 (A:) Probable 97.1 0.00015 1.1E-08 70.8 4.1 28 217-244 4-31 (174)
87 d1zaka1 c.37.1.1 (A:3-127,A:15 97.0 9.4E-05 6.8E-09 74.3 2.3 30 218-247 3-32 (189)
88 d1zaka1 c.37.1.1 (A:3-127,A:15 97.0 0.00015 1.1E-08 72.7 3.4 30 816-845 3-32 (189)
89 d2bdta1 c.37.1.25 (A:1-176) Hy 97.0 0.00018 1.3E-08 69.6 3.8 28 817-844 3-30 (176)
90 d2bdta1 c.37.1.25 (A:1-176) Hy 97.0 0.00015 1.1E-08 70.2 3.2 27 219-245 3-29 (176)
91 d1m8pa3 c.37.1.15 (A:391-573) 96.9 0.0001 7.3E-09 72.0 1.7 27 219-245 7-33 (183)
92 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00024 1.8E-08 71.3 4.6 32 816-849 6-37 (194)
93 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00021 1.5E-08 71.8 3.8 33 217-251 5-37 (194)
94 d1ukza_ c.37.1.1 (A:) Uridylat 96.9 0.00031 2.3E-08 70.7 5.2 30 816-845 8-37 (196)
95 d1zina1 c.37.1.1 (A:1-125,A:16 96.9 0.0002 1.5E-08 70.7 3.6 28 220-247 2-29 (182)
96 d1zina1 c.37.1.1 (A:1-125,A:16 96.9 0.00029 2.1E-08 69.5 4.5 29 818-846 2-30 (182)
97 d1m8pa3 c.37.1.15 (A:391-573) 96.8 0.00015 1.1E-08 70.7 1.9 27 816-842 6-32 (183)
98 d1ukza_ c.37.1.1 (A:) Uridylat 96.8 0.00034 2.5E-08 70.4 4.6 33 218-252 8-40 (196)
99 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.8 0.00031 2.2E-08 70.4 4.1 33 218-252 3-35 (190)
100 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.8 0.00037 2.7E-08 69.8 4.5 29 817-845 4-32 (190)
101 d2cdna1 c.37.1.1 (A:1-181) Ade 96.8 0.00028 2E-08 70.1 3.5 28 220-247 2-29 (181)
102 d1x6va3 c.37.1.4 (A:34-228) Ad 96.8 0.00014 1E-08 72.4 1.0 30 218-247 19-48 (195)
103 d3adka_ c.37.1.1 (A:) Adenylat 96.7 0.00043 3.1E-08 69.6 4.5 34 816-851 8-41 (194)
104 d2cdna1 c.37.1.1 (A:1-181) Ade 96.7 0.00044 3.2E-08 68.6 4.5 28 818-845 2-29 (181)
105 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.7 0.00047 3.4E-08 68.5 4.5 29 818-846 2-30 (182)
106 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.7 0.00046 3.3E-08 68.6 4.3 28 220-247 2-29 (182)
107 d3adka_ c.37.1.1 (A:) Adenylat 96.7 0.00042 3E-08 69.7 3.9 34 218-253 8-41 (194)
108 d1teva_ c.37.1.1 (A:) UMP/CMP 96.7 0.00046 3.3E-08 69.1 4.0 29 816-844 1-29 (194)
109 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.6 0.00057 4.1E-08 66.5 4.6 24 219-242 2-25 (189)
110 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.6 0.00052 3.8E-08 69.2 4.3 29 817-845 7-35 (189)
111 d1e4va1 c.37.1.1 (A:1-121,A:15 96.6 0.00056 4E-08 67.7 4.5 28 818-845 2-29 (179)
112 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.6 0.00038 2.8E-08 70.2 3.3 33 219-253 7-39 (189)
113 d1teva_ c.37.1.1 (A:) UMP/CMP 96.6 0.00043 3.2E-08 69.3 3.6 32 218-251 1-32 (194)
114 d1akya1 c.37.1.1 (A:3-130,A:16 96.6 0.00037 2.7E-08 69.3 3.0 33 219-253 3-35 (180)
115 d1x6va3 c.37.1.4 (A:34-228) Ad 96.6 0.00022 1.6E-08 70.9 1.3 29 816-844 19-47 (195)
116 d1e4va1 c.37.1.1 (A:1-121,A:15 96.6 0.00053 3.9E-08 67.8 4.1 28 220-247 2-29 (179)
117 d1akya1 c.37.1.1 (A:3-130,A:16 96.6 0.00057 4.2E-08 67.9 4.2 32 818-851 4-35 (180)
118 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.6 0.00072 5.3E-08 65.7 4.7 24 817-840 2-25 (189)
119 d1ye8a1 c.37.1.11 (A:1-178) Hy 96.4 0.00067 4.9E-08 66.4 3.5 31 220-250 2-32 (178)
120 d1ckea_ c.37.1.1 (A:) CMP kina 96.4 0.00086 6.2E-08 67.9 4.3 29 817-845 4-32 (225)
121 d1yj5a2 c.37.1.1 (A:351-522) 5 96.4 0.00055 4E-08 68.0 2.4 30 815-844 13-42 (172)
122 d1yj5a2 c.37.1.1 (A:351-522) 5 96.3 0.00057 4.2E-08 67.9 2.2 33 217-251 13-45 (172)
123 d1ye8a1 c.37.1.11 (A:1-178) Hy 96.3 0.00099 7.2E-08 65.1 3.9 30 818-847 2-31 (178)
124 d1ckea_ c.37.1.1 (A:) CMP kina 96.2 0.0011 8.3E-08 67.0 4.1 28 219-246 4-31 (225)
125 d1ly1a_ c.37.1.1 (A:) Polynucl 96.2 0.0011 8.1E-08 63.1 3.6 33 219-252 3-35 (152)
126 d1m7ga_ c.37.1.4 (A:) Adenosin 96.2 0.0022 1.6E-07 65.5 5.9 39 218-256 24-66 (208)
127 d1q3ta_ c.37.1.1 (A:) CMP kina 96.2 0.0014 1E-07 66.7 4.2 27 220-246 5-31 (223)
128 d1q3ta_ c.37.1.1 (A:) CMP kina 96.2 0.0013 9.5E-08 66.9 4.0 28 818-845 5-32 (223)
129 d1ly1a_ c.37.1.1 (A:) Polynucl 96.1 0.0014 1E-07 62.4 3.8 33 817-850 3-35 (152)
130 d1m7ga_ c.37.1.4 (A:) Adenosin 96.1 0.0026 1.9E-07 65.0 5.9 39 816-854 24-66 (208)
131 d1bifa1 c.37.1.7 (A:37-249) 6- 96.0 0.0012 9.1E-08 66.0 2.8 26 218-243 2-27 (213)
132 d1khta_ c.37.1.1 (A:) Adenylat 95.8 0.0025 1.8E-07 61.9 4.1 26 219-244 2-27 (190)
133 d1bifa1 c.37.1.7 (A:37-249) 6- 95.7 0.0033 2.4E-07 62.8 4.8 35 816-850 2-39 (213)
134 d1khta_ c.37.1.1 (A:) Adenylat 95.6 0.0027 1.9E-07 61.8 3.1 26 817-842 2-27 (190)
135 d1np6a_ c.37.1.10 (A:) Molybdo 95.5 0.0031 2.2E-07 60.6 3.5 24 219-242 3-26 (170)
136 d1nksa_ c.37.1.1 (A:) Adenylat 95.4 0.003 2.2E-07 61.7 3.0 28 220-247 3-30 (194)
137 d1np6a_ c.37.1.10 (A:) Molybdo 95.4 0.0037 2.7E-07 60.0 3.5 24 817-840 3-26 (170)
138 d1qzma_ c.37.1.20 (A:) ATPase 95.2 0.024 1.8E-06 50.4 7.9 86 505-599 2-91 (94)
139 d1nksa_ c.37.1.1 (A:) Adenylat 95.1 0.004 2.9E-07 60.8 2.7 26 818-843 3-28 (194)
140 d1rz3a_ c.37.1.6 (A:) Hypothet 94.9 0.018 1.3E-06 56.4 6.9 27 219-245 23-49 (198)
141 d1rz3a_ c.37.1.6 (A:) Hypothet 94.6 0.028 2.1E-06 54.8 7.5 26 817-842 23-48 (198)
142 d1vmaa2 c.37.1.10 (A:82-294) G 94.5 0.015 1.1E-06 59.6 5.3 38 216-253 9-49 (213)
143 d1j8yf2 c.37.1.10 (F:87-297) G 94.4 0.015 1.1E-06 59.4 5.2 38 216-253 10-50 (211)
144 d1vmaa2 c.37.1.10 (A:82-294) G 94.4 0.019 1.4E-06 58.7 5.9 38 815-852 10-50 (213)
145 d1lvga_ c.37.1.1 (A:) Guanylat 94.4 0.011 8E-07 59.0 3.8 26 221-246 3-28 (190)
146 d1gkya_ c.37.1.1 (A:) Guanylat 94.3 0.01 7.3E-07 59.0 3.5 27 220-246 3-29 (186)
147 d1ls1a2 c.37.1.10 (A:89-295) G 94.3 0.021 1.6E-06 58.1 6.1 37 218-254 10-49 (207)
148 d1gkya_ c.37.1.1 (A:) Guanylat 94.3 0.011 8.3E-07 58.6 3.9 26 819-844 4-29 (186)
149 d1lvga_ c.37.1.1 (A:) Guanylat 94.2 0.014 1E-06 58.3 4.3 26 819-844 3-28 (190)
150 d1okkd2 c.37.1.10 (D:97-303) G 94.1 0.022 1.6E-06 57.9 5.7 37 816-852 6-45 (207)
151 d1j8yf2 c.37.1.10 (F:87-297) G 94.1 0.022 1.6E-06 58.1 5.6 37 815-851 11-50 (211)
152 d1ls1a2 c.37.1.10 (A:89-295) G 94.1 0.031 2.2E-06 56.8 6.6 37 816-852 10-49 (207)
153 d1okkd2 c.37.1.10 (D:97-303) G 94.0 0.021 1.5E-06 58.1 5.2 37 217-253 5-44 (207)
154 d1znwa1 c.37.1.1 (A:20-201) Gu 93.9 0.014 1E-06 57.5 3.4 25 219-243 3-27 (182)
155 d1znwa1 c.37.1.1 (A:20-201) Gu 93.8 0.014 1E-06 57.4 3.3 25 817-841 3-27 (182)
156 d2qy9a2 c.37.1.10 (A:285-495) 93.6 0.026 1.9E-06 57.5 5.0 37 218-254 9-48 (211)
157 d2qy9a2 c.37.1.10 (A:285-495) 93.4 0.032 2.3E-06 56.9 5.3 37 816-852 9-48 (211)
158 d1s96a_ c.37.1.1 (A:) Guanylat 93.4 0.043 3.1E-06 55.5 6.2 25 219-243 3-27 (205)
159 d1uj2a_ c.37.1.6 (A:) Uridine- 93.3 0.018 1.3E-06 57.9 3.3 28 218-245 2-29 (213)
160 d1uj2a_ c.37.1.6 (A:) Uridine- 93.2 0.024 1.8E-06 57.0 3.9 28 816-843 2-29 (213)
161 d2a5yb3 c.37.1.20 (B:109-385) 92.7 0.063 4.6E-06 56.6 6.6 48 782-840 21-68 (277)
162 d2a5yb3 c.37.1.20 (B:109-385) 92.7 0.052 3.8E-06 57.3 5.9 48 184-242 21-68 (277)
163 d1tf7a2 c.37.1.11 (A:256-497) 92.6 0.042 3.1E-06 55.9 4.9 34 218-251 26-62 (242)
164 d1g6oa_ c.37.1.11 (A:) Hexamer 92.3 0.043 3.2E-06 59.4 4.7 39 189-243 153-191 (323)
165 d1tf7a2 c.37.1.11 (A:256-497) 92.0 0.066 4.8E-06 54.4 5.4 34 816-849 26-62 (242)
166 d1kgda_ c.37.1.1 (A:) Guanylat 91.9 0.047 3.4E-06 53.9 4.0 28 219-246 4-31 (178)
167 d1kgda_ c.37.1.1 (A:) Guanylat 91.8 0.056 4.1E-06 53.2 4.4 28 817-844 4-31 (178)
168 d1n0wa_ c.37.1.11 (A:) DNA rep 91.8 0.045 3.3E-06 53.4 3.7 24 219-242 24-47 (242)
169 d1r8sa_ c.37.1.8 (A:) ADP-ribo 91.7 0.042 3.1E-06 51.6 3.3 22 220-241 2-23 (160)
170 d1xjca_ c.37.1.10 (A:) Molybdo 91.7 0.045 3.3E-06 52.7 3.5 23 220-242 3-25 (165)
171 d1g6oa_ c.37.1.11 (A:) Hexamer 91.5 0.056 4.1E-06 58.5 4.4 25 817-841 167-191 (323)
172 d2qtvb1 c.37.1.8 (B:24-189) SA 91.3 0.05 3.6E-06 50.9 3.4 23 219-241 1-23 (166)
173 d1sq5a_ c.37.1.6 (A:) Pantothe 91.2 0.17 1.2E-05 54.2 7.8 37 816-852 80-121 (308)
174 d1xjca_ c.37.1.10 (A:) Molybdo 91.0 0.058 4.2E-06 51.9 3.5 23 818-840 3-25 (165)
175 d1uf9a_ c.37.1.1 (A:) Dephosph 91.0 0.057 4.1E-06 53.1 3.5 29 816-845 3-31 (191)
176 d1s96a_ c.37.1.1 (A:) Guanylat 90.9 0.083 6.1E-06 53.3 4.8 25 817-841 3-27 (205)
177 d1szpa2 c.37.1.11 (A:145-395) 90.9 0.044 3.2E-06 55.2 2.6 23 219-241 35-57 (251)
178 d1n0wa_ c.37.1.11 (A:) DNA rep 90.9 0.062 4.5E-06 52.3 3.7 24 817-840 24-47 (242)
179 d1tuea_ c.37.1.20 (A:) Replica 90.8 0.14 1E-05 51.5 6.1 27 816-842 53-79 (205)
180 d1r8sa_ c.37.1.8 (A:) ADP-ribo 90.7 0.061 4.5E-06 50.4 3.4 22 818-839 2-23 (160)
181 d1szpa2 c.37.1.11 (A:145-395) 90.6 0.05 3.7E-06 54.7 2.8 23 817-839 35-57 (251)
182 d1uf9a_ c.37.1.1 (A:) Dephosph 90.6 0.061 4.4E-06 52.9 3.3 29 218-247 3-31 (191)
183 d2qtvb1 c.37.1.8 (B:24-189) SA 90.3 0.073 5.3E-06 49.7 3.4 22 818-839 2-23 (166)
184 d1pzna2 c.37.1.11 (A:96-349) D 90.1 0.07 5.1E-06 54.2 3.4 24 219-242 37-60 (254)
185 d1v5wa_ c.37.1.11 (A:) Meiotic 89.9 0.084 6.1E-06 53.4 3.8 24 219-242 38-61 (258)
186 d1upta_ c.37.1.8 (A:) ADP-ribo 89.9 0.079 5.7E-06 49.9 3.3 22 219-240 6-27 (169)
187 d1sq5a_ c.37.1.6 (A:) Pantothe 89.7 0.12 8.6E-06 55.5 4.9 37 218-254 80-121 (308)
188 d1pzna2 c.37.1.11 (A:96-349) D 89.6 0.088 6.4E-06 53.4 3.6 24 817-840 37-60 (254)
189 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 89.5 0.071 5.2E-06 51.1 2.7 22 218-239 13-34 (186)
190 d2vp4a1 c.37.1.1 (A:12-208) De 89.5 0.049 3.6E-06 53.6 1.5 27 218-244 9-35 (197)
191 d1tuea_ c.37.1.20 (A:) Replica 89.4 0.078 5.7E-06 53.4 2.9 27 218-244 53-79 (205)
192 d2awna2 c.37.1.12 (A:4-235) Ma 89.3 0.079 5.7E-06 54.6 3.0 36 817-852 27-64 (232)
193 d1l2ta_ c.37.1.12 (A:) MJ0796 89.3 0.079 5.7E-06 54.6 2.9 36 219-254 32-69 (230)
194 d1htwa_ c.37.1.18 (A:) Hypothe 89.2 0.3 2.2E-05 47.1 7.0 27 817-843 34-60 (158)
195 d1l2ta_ c.37.1.12 (A:) MJ0796 89.2 0.07 5.1E-06 55.0 2.5 36 817-852 32-69 (230)
196 d1odfa_ c.37.1.6 (A:) Hypothet 89.2 0.34 2.5E-05 51.2 8.0 37 816-852 27-69 (286)
197 d2awna2 c.37.1.12 (A:4-235) Ma 89.1 0.081 5.9E-06 54.6 2.9 25 219-243 27-51 (232)
198 d1g2912 c.37.1.12 (1:1-240) Ma 89.1 0.084 6.1E-06 54.7 3.0 25 817-841 30-54 (240)
199 d1g2912 c.37.1.12 (1:1-240) Ma 89.1 0.082 5.9E-06 54.8 2.9 25 219-243 30-54 (240)
200 d1w36d1 c.37.1.19 (D:2-360) Ex 89.1 0.17 1.2E-05 55.4 5.7 22 219-240 164-185 (359)
201 d1tf7a1 c.37.1.11 (A:14-255) C 89.0 0.15 1.1E-05 50.7 4.9 34 218-251 26-63 (242)
202 d1v5wa_ c.37.1.11 (A:) Meiotic 89.0 0.099 7.2E-06 52.8 3.5 24 817-840 38-61 (258)
203 d1nn5a_ c.37.1.1 (A:) Thymidyl 89.0 0.12 9E-06 52.0 4.2 30 220-249 5-37 (209)
204 d2onka1 c.37.1.12 (A:1-240) Mo 89.0 0.086 6.3E-06 54.6 3.0 35 818-852 26-62 (240)
205 d1yrba1 c.37.1.10 (A:1-244) AT 89.0 0.13 9.4E-06 51.8 4.4 23 220-242 2-24 (244)
206 d2onka1 c.37.1.12 (A:1-240) Mo 89.0 0.084 6.1E-06 54.7 2.9 24 219-242 25-48 (240)
207 d1upta_ c.37.1.8 (A:) ADP-ribo 88.7 0.11 7.9E-06 48.8 3.4 22 817-838 6-27 (169)
208 d2vp4a1 c.37.1.1 (A:12-208) De 88.7 0.068 5E-06 52.6 1.9 27 816-842 9-35 (197)
209 d1ksha_ c.37.1.8 (A:) ADP-ribo 88.7 0.096 7E-06 49.9 2.9 22 219-240 3-24 (165)
210 d3b60a1 c.37.1.12 (A:329-581) 88.5 0.074 5.4E-06 55.6 2.1 25 219-243 42-66 (253)
211 d1gsia_ c.37.1.1 (A:) Thymidyl 88.4 0.21 1.5E-05 49.2 5.4 32 819-850 3-37 (208)
212 d1sgwa_ c.37.1.12 (A:) Putativ 88.4 0.065 4.7E-06 54.0 1.5 24 219-242 28-51 (200)
213 d1nn5a_ c.37.1.1 (A:) Thymidyl 88.3 0.18 1.3E-05 50.7 4.9 31 818-848 5-38 (209)
214 d1v43a3 c.37.1.12 (A:7-245) Hy 88.3 0.1 7.5E-06 54.0 3.0 35 817-851 33-69 (239)
215 d1gsia_ c.37.1.1 (A:) Thymidyl 88.2 0.19 1.4E-05 49.6 4.9 30 221-250 3-35 (208)
216 d1v43a3 c.37.1.12 (A:7-245) Hy 88.2 0.1 7.4E-06 54.0 2.9 25 219-243 33-57 (239)
217 d2fh5b1 c.37.1.8 (B:63-269) Si 88.1 0.12 8.9E-06 51.2 3.4 23 817-839 1-23 (207)
218 d3dhwc1 c.37.1.12 (C:1-240) Me 88.1 0.084 6.1E-06 54.7 2.1 25 219-243 32-56 (240)
219 d1a7ja_ c.37.1.6 (A:) Phosphor 88.1 0.16 1.1E-05 53.9 4.4 36 219-254 5-43 (288)
220 d1z2aa1 c.37.1.8 (A:8-171) Rab 88.0 0.13 9.1E-06 49.2 3.3 21 220-240 4-24 (164)
221 d2fh5b1 c.37.1.8 (B:63-269) Si 88.0 0.12 9.1E-06 51.1 3.4 22 219-240 1-22 (207)
222 d3dhwc1 c.37.1.12 (C:1-240) Me 88.0 0.093 6.8E-06 54.3 2.4 25 817-841 32-56 (240)
223 d1htwa_ c.37.1.18 (A:) Hypothe 87.9 0.17 1.3E-05 48.9 4.2 27 219-245 34-60 (158)
224 d1sgwa_ c.37.1.12 (A:) Putativ 87.9 0.074 5.4E-06 53.5 1.6 25 817-841 28-52 (200)
225 d2a5ja1 c.37.1.8 (A:9-181) Rab 87.9 0.13 9.3E-06 49.6 3.3 21 220-240 5-25 (173)
226 d3b60a1 c.37.1.12 (A:329-581) 87.9 0.092 6.7E-06 54.8 2.3 35 817-851 42-78 (253)
227 d3d31a2 c.37.1.12 (A:1-229) Su 87.8 0.082 6E-06 54.4 1.9 36 817-852 27-64 (229)
228 d1zd9a1 c.37.1.8 (A:18-181) AD 87.8 0.13 9.5E-06 49.0 3.3 22 219-240 3-24 (164)
229 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 87.7 0.12 9E-06 49.3 3.1 22 816-837 13-34 (186)
230 d1zj6a1 c.37.1.8 (A:2-178) ADP 87.7 0.12 8.6E-06 49.5 2.9 22 219-240 16-37 (177)
231 d1nrjb_ c.37.1.8 (B:) Signal r 87.7 0.13 9.7E-06 50.5 3.4 23 219-241 4-26 (209)
232 d2pmka1 c.37.1.12 (A:467-707) 87.7 0.088 6.4E-06 54.6 2.0 37 218-254 29-67 (241)
233 d1tf7a1 c.37.1.11 (A:14-255) C 87.6 0.25 1.8E-05 49.0 5.4 23 816-838 26-48 (242)
234 d3d31a2 c.37.1.12 (A:1-229) Su 87.5 0.082 6E-06 54.4 1.7 25 219-243 27-51 (229)
235 d2fn4a1 c.37.1.8 (A:24-196) r- 87.5 0.14 1E-05 49.4 3.3 22 219-240 7-28 (173)
236 d4tmka_ c.37.1.1 (A:) Thymidyl 87.5 0.13 9.1E-06 51.4 3.0 24 219-242 3-26 (210)
237 d1jj7a_ c.37.1.12 (A:) Peptide 87.4 0.093 6.8E-06 54.7 2.0 36 219-254 41-78 (251)
238 d1mv5a_ c.37.1.12 (A:) Multidr 87.4 0.092 6.7E-06 54.4 2.0 24 219-242 29-52 (242)
239 d1nrjb_ c.37.1.8 (B:) Signal r 87.3 0.15 1.1E-05 50.2 3.4 23 817-839 4-26 (209)
240 d1ksha_ c.37.1.8 (A:) ADP-ribo 87.3 0.14 9.9E-06 48.8 3.0 22 817-838 3-24 (165)
241 d1odfa_ c.37.1.6 (A:) Hypothet 87.2 0.25 1.8E-05 52.3 5.4 37 218-254 27-69 (286)
242 d1yrba1 c.37.1.10 (A:1-244) AT 87.2 0.15 1.1E-05 51.4 3.4 22 819-840 3-24 (244)
243 d1r0wa_ c.37.1.12 (A:) Cystic 87.2 0.11 7.8E-06 55.1 2.4 25 219-243 63-87 (281)
244 d1jjva_ c.37.1.1 (A:) Dephosph 87.1 0.12 8.7E-06 51.7 2.6 29 220-249 4-32 (205)
245 d2i1qa2 c.37.1.11 (A:65-322) D 87.1 0.15 1.1E-05 51.0 3.3 24 219-242 35-58 (258)
246 d1fzqa_ c.37.1.8 (A:) ADP-ribo 87.0 0.16 1.2E-05 48.6 3.5 21 218-238 16-36 (176)
247 d3raba_ c.37.1.8 (A:) Rab3a {R 86.9 0.16 1.1E-05 48.8 3.3 23 219-241 6-28 (169)
248 d2ocpa1 c.37.1.1 (A:37-277) De 86.8 0.22 1.6E-05 50.4 4.5 30 816-845 2-31 (241)
249 d1kaoa_ c.37.1.8 (A:) Rap2a {H 86.8 0.16 1.2E-05 48.5 3.3 23 219-241 4-26 (167)
250 d2f7sa1 c.37.1.8 (A:5-190) Rab 86.8 0.15 1.1E-05 49.6 3.1 21 220-240 7-27 (186)
251 d2eyqa3 c.37.1.19 (A:546-778) 86.8 0.28 2E-05 50.3 5.3 42 187-242 59-100 (233)
252 d2cxxa1 c.37.1.8 (A:2-185) GTP 86.7 0.14 1.1E-05 49.3 2.9 21 220-240 2-22 (184)
253 d1mv5a_ c.37.1.12 (A:) Multidr 86.7 0.11 8.2E-06 53.8 2.1 35 817-851 29-65 (242)
254 d2f9la1 c.37.1.8 (A:8-182) Rab 86.7 0.17 1.2E-05 48.9 3.3 22 219-240 5-26 (175)
255 d4tmka_ c.37.1.1 (A:) Thymidyl 86.6 0.16 1.1E-05 50.7 3.2 24 817-840 3-26 (210)
256 d1jjva_ c.37.1.1 (A:) Dephosph 86.6 0.13 9.7E-06 51.3 2.6 28 818-846 4-31 (205)
257 d1z2aa1 c.37.1.8 (A:8-171) Rab 86.6 0.17 1.3E-05 48.1 3.4 21 818-838 4-24 (164)
258 d1jj7a_ c.37.1.12 (A:) Peptide 86.6 0.12 8.5E-06 53.9 2.2 36 817-852 41-78 (251)
259 d1r0wa_ c.37.1.12 (A:) Cystic 86.6 0.13 9.6E-06 54.4 2.7 25 817-841 63-87 (281)
260 d1kkma_ c.91.1.2 (A:) HPr kina 86.5 0.19 1.4E-05 49.4 3.7 36 816-852 14-49 (176)
261 d1zd9a1 c.37.1.8 (A:18-181) AD 86.4 0.18 1.3E-05 48.0 3.4 21 818-838 4-24 (164)
262 d1zj6a1 c.37.1.8 (A:2-178) ADP 86.3 0.17 1.2E-05 48.4 3.1 22 817-838 16-37 (177)
263 d1oxxk2 c.37.1.12 (K:1-242) Gl 86.3 0.095 6.9E-06 54.3 1.3 25 817-841 32-56 (242)
264 d2pmka1 c.37.1.12 (A:467-707) 86.3 0.12 8.7E-06 53.5 2.1 37 816-852 29-67 (241)
265 d2cxxa1 c.37.1.8 (A:2-185) GTP 86.3 0.17 1.2E-05 48.7 3.2 21 818-838 2-22 (184)
266 d2a5ja1 c.37.1.8 (A:9-181) Rab 86.2 0.19 1.3E-05 48.4 3.3 21 818-838 5-25 (173)
267 d2atva1 c.37.1.8 (A:5-172) Ras 86.1 0.18 1.3E-05 48.3 3.3 21 220-240 4-24 (168)
268 d2ew1a1 c.37.1.8 (A:4-174) Rab 86.0 0.17 1.3E-05 48.5 3.1 22 219-240 6-27 (171)
269 d1svia_ c.37.1.8 (A:) Probable 86.0 0.2 1.5E-05 49.0 3.6 23 816-838 23-45 (195)
270 d1z0fa1 c.37.1.8 (A:8-173) Rab 86.0 0.19 1.4E-05 47.9 3.3 22 219-240 5-26 (166)
271 d1ky3a_ c.37.1.8 (A:) Rab-rela 86.0 0.19 1.4E-05 48.2 3.3 21 220-240 4-24 (175)
272 d2ocpa1 c.37.1.1 (A:37-277) De 85.9 0.2 1.5E-05 50.6 3.7 29 218-246 2-30 (241)
273 d1vhta_ c.37.1.1 (A:) Dephosph 85.9 0.15 1.1E-05 51.0 2.6 32 220-254 5-36 (208)
274 d1oxxk2 c.37.1.12 (K:1-242) Gl 85.8 0.094 6.8E-06 54.4 1.0 24 219-242 32-55 (242)
275 d1mkya1 c.37.1.8 (A:2-172) Pro 85.8 0.19 1.4E-05 48.1 3.2 21 220-240 2-22 (171)
276 d1tmka_ c.37.1.1 (A:) Thymidyl 85.8 0.48 3.5E-05 47.5 6.5 32 817-848 4-35 (214)
277 d1u94a1 c.37.1.11 (A:6-268) Re 85.6 0.32 2.3E-05 50.8 5.1 35 219-253 55-92 (263)
278 d1a7ja_ c.37.1.6 (A:) Phosphor 85.6 0.24 1.7E-05 52.5 4.1 36 817-852 5-43 (288)
279 d1b0ua_ c.37.1.12 (A:) ATP-bin 85.6 0.15 1.1E-05 53.4 2.4 24 219-242 29-52 (258)
280 d1b0ua_ c.37.1.12 (A:) ATP-bin 85.5 0.15 1.1E-05 53.2 2.5 25 817-841 29-53 (258)
281 d1uaaa1 c.37.1.19 (A:2-307) DE 85.4 0.2 1.4E-05 52.2 3.4 24 219-242 15-39 (306)
282 d1r2qa_ c.37.1.8 (A:) Rab5a {H 85.4 0.21 1.5E-05 47.8 3.3 23 219-241 7-29 (170)
283 d1kkma_ c.91.1.2 (A:) HPr kina 85.4 0.2 1.5E-05 49.2 3.2 35 219-254 15-49 (176)
284 d1ctqa_ c.37.1.8 (A:) cH-p21 R 85.3 0.2 1.4E-05 47.8 3.1 22 219-240 4-25 (166)
285 d1vhta_ c.37.1.1 (A:) Dephosph 85.3 0.17 1.3E-05 50.5 2.8 31 818-851 5-35 (208)
286 d1svia_ c.37.1.8 (A:) Probable 85.3 0.2 1.5E-05 49.0 3.2 22 219-240 24-45 (195)
287 d1w36d1 c.37.1.19 (D:2-360) Ex 85.3 0.38 2.7E-05 52.5 5.7 21 817-837 164-184 (359)
288 d2i1qa2 c.37.1.11 (A:65-322) D 85.2 0.23 1.6E-05 49.6 3.6 24 817-840 35-58 (258)
289 d3raba_ c.37.1.8 (A:) Rab3a {R 85.2 0.22 1.6E-05 47.6 3.4 22 818-839 7-28 (169)
290 d1pjra1 c.37.1.19 (A:1-318) DE 85.1 0.2 1.4E-05 52.8 3.2 24 219-242 25-49 (318)
291 d2f9la1 c.37.1.8 (A:8-182) Rab 85.0 0.23 1.6E-05 47.9 3.3 21 818-838 6-26 (175)
292 d1mkya1 c.37.1.8 (A:2-172) Pro 85.0 0.22 1.6E-05 47.6 3.2 21 818-838 2-22 (171)
293 d2fn4a1 c.37.1.8 (A:24-196) r- 85.0 0.25 1.8E-05 47.5 3.6 22 817-838 7-28 (173)
294 d2f7sa1 c.37.1.8 (A:5-190) Rab 85.0 0.2 1.5E-05 48.6 3.0 21 818-838 7-27 (186)
295 d2p67a1 c.37.1.10 (A:1-327) LA 85.0 0.35 2.6E-05 52.1 5.2 37 816-852 54-95 (327)
296 d1g16a_ c.37.1.8 (A:) Rab-rela 85.0 0.21 1.5E-05 47.5 3.1 22 220-241 4-25 (166)
297 d1z08a1 c.37.1.8 (A:17-183) Ra 84.9 0.22 1.6E-05 47.4 3.2 22 219-240 4-25 (167)
298 d1z06a1 c.37.1.8 (A:32-196) Ra 84.9 0.23 1.7E-05 47.1 3.3 22 219-240 3-24 (165)
299 d1kaoa_ c.37.1.8 (A:) Rap2a {H 84.9 0.23 1.7E-05 47.2 3.3 22 817-838 4-25 (167)
300 d1u94a1 c.37.1.11 (A:6-268) Re 84.8 0.4 2.9E-05 50.0 5.4 35 817-851 55-92 (263)
301 d1e9ra_ c.37.1.11 (A:) Bacteri 84.7 0.22 1.6E-05 54.9 3.5 34 218-251 50-86 (433)
302 d1knxa2 c.91.1.2 (A:133-309) H 84.6 0.19 1.4E-05 49.6 2.5 33 219-252 16-48 (177)
303 d2bmea1 c.37.1.8 (A:6-179) Rab 84.6 0.22 1.6E-05 47.7 3.1 22 219-240 6-27 (174)
304 d2erya1 c.37.1.8 (A:10-180) r- 84.6 0.22 1.6E-05 47.7 3.0 21 220-240 7-27 (171)
305 d2gj8a1 c.37.1.8 (A:216-376) P 84.5 0.22 1.6E-05 46.9 2.9 21 220-240 3-23 (161)
306 d2erxa1 c.37.1.8 (A:6-176) di- 84.4 0.23 1.7E-05 47.4 3.1 21 220-240 4-24 (171)
307 d1knxa2 c.91.1.2 (A:133-309) H 84.3 0.22 1.6E-05 49.1 2.8 32 816-848 15-46 (177)
308 d2p67a1 c.37.1.10 (A:1-327) LA 84.3 0.49 3.6E-05 50.9 6.0 36 218-253 54-94 (327)
309 d2g6ba1 c.37.1.8 (A:58-227) Ra 84.2 0.25 1.9E-05 47.2 3.3 22 219-240 7-28 (170)
310 d2ew1a1 c.37.1.8 (A:4-174) Rab 84.2 0.26 1.9E-05 47.2 3.3 21 818-838 7-27 (171)
311 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 84.2 0.25 1.8E-05 47.9 3.3 21 220-240 4-24 (184)
312 d1xtqa1 c.37.1.8 (A:3-169) GTP 84.1 0.24 1.8E-05 47.1 3.1 22 219-240 5-26 (167)
313 d1fzqa_ c.37.1.8 (A:) ADP-ribo 84.1 0.3 2.2E-05 46.6 3.8 21 816-836 16-36 (176)
314 d1ky3a_ c.37.1.8 (A:) Rab-rela 84.1 0.26 1.9E-05 47.1 3.3 21 818-838 4-24 (175)
315 d1e9ra_ c.37.1.11 (A:) Bacteri 84.0 0.3 2.2E-05 53.8 4.3 35 816-850 50-87 (433)
316 d2atva1 c.37.1.8 (A:5-172) Ras 83.9 0.27 2E-05 47.0 3.3 21 818-838 4-24 (168)
317 d1wmsa_ c.37.1.8 (A:) Rab9a {H 83.9 0.27 1.9E-05 47.2 3.3 22 219-240 7-28 (174)
318 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 83.8 0.25 1.8E-05 47.6 3.0 23 219-241 3-25 (177)
319 d1p9ra_ c.37.1.11 (A:) Extrace 83.8 0.4 2.9E-05 53.0 5.1 26 219-244 159-184 (401)
320 d1p9ra_ c.37.1.11 (A:) Extrace 83.7 0.45 3.3E-05 52.6 5.5 41 816-856 158-202 (401)
321 d2hyda1 c.37.1.12 (A:324-578) 83.7 0.11 8.3E-06 54.1 0.5 36 219-254 45-82 (255)
322 d1yzqa1 c.37.1.8 (A:14-177) Ra 83.7 0.26 1.9E-05 46.7 3.1 21 220-240 2-22 (164)
323 d1tmka_ c.37.1.1 (A:) Thymidyl 83.7 0.41 3E-05 48.0 4.8 31 219-249 4-34 (214)
324 d1gm5a3 c.37.1.19 (A:286-549) 83.7 0.33 2.4E-05 50.8 4.1 42 187-242 87-128 (264)
325 d1ctqa_ c.37.1.8 (A:) cH-p21 R 83.7 0.28 2E-05 46.7 3.3 21 818-838 5-25 (166)
326 d1puia_ c.37.1.8 (A:) Probable 83.6 0.17 1.2E-05 48.4 1.7 22 218-239 16-37 (188)
327 d1a1va1 c.37.1.14 (A:190-325) 83.5 0.31 2.3E-05 44.8 3.5 32 219-250 9-40 (136)
328 d1z0ja1 c.37.1.8 (A:2-168) Rab 83.5 0.28 2.1E-05 46.7 3.3 22 219-240 5-26 (167)
329 d2gj8a1 c.37.1.8 (A:216-376) P 83.5 0.27 2E-05 46.1 3.1 21 818-838 3-23 (161)
330 d2gjsa1 c.37.1.8 (A:91-258) Ra 83.4 0.27 2E-05 47.0 3.1 21 220-240 3-23 (168)
331 d1z0fa1 c.37.1.8 (A:8-173) Rab 83.4 0.3 2.2E-05 46.5 3.4 21 818-838 6-26 (166)
332 d1c1ya_ c.37.1.8 (A:) Rap1A {H 83.4 0.29 2.1E-05 46.6 3.3 23 219-241 4-26 (167)
333 d1uaaa1 c.37.1.19 (A:2-307) DE 83.4 0.27 2E-05 51.1 3.3 23 817-839 15-38 (306)
334 d1u8za_ c.37.1.8 (A:) Ras-rela 83.3 0.28 2E-05 47.0 3.1 22 219-240 5-26 (168)
335 d1p5zb_ c.37.1.1 (B:) Deoxycyt 83.3 0.12 8.8E-06 52.1 0.4 25 219-243 3-27 (241)
336 d1puia_ c.37.1.8 (A:) Probable 83.1 0.2 1.5E-05 47.8 2.0 22 816-837 16-37 (188)
337 d1wb9a2 c.37.1.12 (A:567-800) 83.1 0.77 5.6E-05 46.9 6.6 24 219-242 42-65 (234)
338 d1cr2a_ c.37.1.11 (A:) Gene 4 83.1 0.4 2.9E-05 49.4 4.5 33 219-251 36-72 (277)
339 d1nlfa_ c.37.1.11 (A:) Hexamer 83.0 0.31 2.3E-05 50.1 3.6 24 219-242 30-53 (274)
340 d2bmea1 c.37.1.8 (A:6-179) Rab 83.0 0.29 2.1E-05 46.9 3.1 21 818-838 7-27 (174)
341 d1x3sa1 c.37.1.8 (A:2-178) Rab 82.9 0.31 2.2E-05 47.0 3.3 22 219-240 8-29 (177)
342 d1g16a_ c.37.1.8 (A:) Rab-rela 82.9 0.31 2.3E-05 46.2 3.3 21 818-838 4-24 (166)
343 d2g3ya1 c.37.1.8 (A:73-244) GT 82.9 0.29 2.1E-05 47.0 3.1 21 220-240 5-25 (172)
344 d2erya1 c.37.1.8 (A:10-180) r- 82.9 0.29 2.1E-05 46.7 3.1 21 818-838 7-27 (171)
345 d1pjra1 c.37.1.19 (A:1-318) DE 82.8 0.3 2.2E-05 51.3 3.4 24 817-840 25-49 (318)
346 d1ji0a_ c.37.1.12 (A:) Branche 82.8 0.24 1.7E-05 51.1 2.5 36 817-852 33-70 (240)
347 d1z06a1 c.37.1.8 (A:32-196) Ra 82.8 0.33 2.4E-05 45.9 3.3 21 818-838 4-24 (165)
348 d1r2qa_ c.37.1.8 (A:) Rab5a {H 82.7 0.33 2.4E-05 46.4 3.4 23 817-839 7-29 (170)
349 d1ji0a_ c.37.1.12 (A:) Branche 82.6 0.24 1.7E-05 51.1 2.4 36 219-254 33-70 (240)
350 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 82.5 0.33 2.4E-05 46.3 3.3 21 220-240 5-25 (170)
351 d2hyda1 c.37.1.12 (A:324-578) 82.5 0.15 1.1E-05 53.3 0.6 36 817-852 45-82 (255)
352 d1xtqa1 c.37.1.8 (A:3-169) GTP 82.5 0.33 2.4E-05 46.1 3.3 22 817-838 5-26 (167)
353 d1ko7a2 c.91.1.2 (A:130-298) H 82.4 0.31 2.2E-05 47.6 3.0 28 219-247 16-43 (169)
354 d1z08a1 c.37.1.8 (A:17-183) Ra 82.4 0.34 2.5E-05 46.1 3.3 21 818-838 5-25 (167)
355 d1p5zb_ c.37.1.1 (B:) Deoxycyt 82.4 0.16 1.1E-05 51.2 0.9 26 817-842 3-28 (241)
356 d1e0sa_ c.37.1.8 (A:) ADP-ribo 82.4 0.22 1.6E-05 47.8 1.9 21 219-239 13-33 (173)
357 d2erxa1 c.37.1.8 (A:6-176) di- 82.3 0.29 2.1E-05 46.6 2.8 21 818-838 4-24 (171)
358 d1ko7a2 c.91.1.2 (A:130-298) H 82.2 0.35 2.5E-05 47.2 3.3 29 816-845 15-43 (169)
359 d1moza_ c.37.1.8 (A:) ADP-ribo 82.1 0.22 1.6E-05 48.1 1.9 20 219-238 18-37 (182)
360 d1deka_ c.37.1.1 (A:) Deoxynuc 82.1 0.27 1.9E-05 49.8 2.5 30 220-251 3-32 (241)
361 d1a1va1 c.37.1.14 (A:190-325) 82.0 0.47 3.5E-05 43.5 4.1 32 817-848 9-40 (136)
362 d2bcgy1 c.37.1.8 (Y:3-196) GTP 81.9 0.32 2.4E-05 47.6 3.1 22 219-240 7-28 (194)
363 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 81.8 0.36 2.6E-05 46.7 3.3 21 818-838 4-24 (184)
364 d2g6ba1 c.37.1.8 (A:58-227) Ra 81.8 0.35 2.5E-05 46.2 3.2 22 817-838 7-28 (170)
365 d1u0ja_ c.37.1.20 (A:) Rep 40 81.8 0.35 2.6E-05 50.6 3.4 26 817-842 105-130 (267)
366 d2qm8a1 c.37.1.10 (A:5-327) Me 81.8 0.4 2.9E-05 51.5 4.0 35 219-253 52-91 (323)
367 d1m7ba_ c.37.1.8 (A:) RhoE (RN 81.8 0.34 2.4E-05 47.0 3.1 22 219-240 3-24 (179)
368 d1mh1a_ c.37.1.8 (A:) Rac {Hum 81.7 0.36 2.6E-05 46.7 3.3 22 219-240 6-27 (183)
369 d1nlfa_ c.37.1.11 (A:) Hexamer 81.7 0.34 2.4E-05 49.8 3.2 24 817-840 30-53 (274)
370 d1u0ja_ c.37.1.20 (A:) Rep 40 81.7 0.41 3E-05 50.0 3.9 26 219-244 105-130 (267)
371 d1yzqa1 c.37.1.8 (A:14-177) Ra 81.6 0.38 2.7E-05 45.5 3.3 21 818-838 2-22 (164)
372 d1deka_ c.37.1.1 (A:) Deoxynuc 81.6 0.31 2.3E-05 49.3 2.9 30 818-849 3-32 (241)
373 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 81.6 0.37 2.7E-05 46.3 3.3 23 817-839 3-25 (177)
374 d1wmsa_ c.37.1.8 (A:) Rab9a {H 81.6 0.38 2.8E-05 46.1 3.3 22 817-838 7-28 (174)
375 d1wf3a1 c.37.1.8 (A:3-180) GTP 81.4 0.35 2.6E-05 46.5 3.1 22 219-240 6-27 (178)
376 d1u0la2 c.37.1.8 (A:69-293) Pr 81.3 0.37 2.7E-05 49.1 3.3 23 219-241 96-118 (225)
377 d1xzpa2 c.37.1.8 (A:212-371) T 81.3 0.19 1.4E-05 47.2 1.0 22 220-241 2-23 (160)
378 d1wf3a1 c.37.1.8 (A:3-180) GTP 81.2 0.34 2.5E-05 46.6 2.8 22 817-838 6-27 (178)
379 d1z0ja1 c.37.1.8 (A:2-168) Rab 81.2 0.4 2.9E-05 45.5 3.3 22 817-838 5-26 (167)
380 d1x1ra1 c.37.1.8 (A:10-178) Ra 81.1 0.39 2.9E-05 45.9 3.3 22 219-240 5-26 (169)
381 d1egaa1 c.37.1.8 (A:4-182) GTP 81.0 0.35 2.6E-05 46.1 2.9 22 817-838 6-27 (179)
382 d2gjsa1 c.37.1.8 (A:91-258) Ra 80.9 0.36 2.6E-05 46.1 2.8 20 818-837 3-22 (168)
383 d1g6ha_ c.37.1.12 (A:) MJ1267 80.8 0.3 2.2E-05 50.8 2.4 36 219-254 31-68 (254)
384 d1g6ha_ c.37.1.12 (A:) MJ1267 80.8 0.31 2.2E-05 50.6 2.5 36 817-852 31-68 (254)
385 d1x3sa1 c.37.1.8 (A:2-178) Rab 80.6 0.43 3.1E-05 45.9 3.4 22 817-838 8-29 (177)
386 d2eyqa3 c.37.1.19 (A:546-778) 80.6 0.77 5.6E-05 46.9 5.5 42 785-840 59-100 (233)
387 d1u8za_ c.37.1.8 (A:) Ras-rela 80.5 0.42 3E-05 45.7 3.2 23 816-838 4-26 (168)
388 d2bcgy1 c.37.1.8 (Y:3-196) GTP 80.4 0.4 2.9E-05 46.9 3.1 22 817-838 7-28 (194)
389 d1egaa1 c.37.1.8 (A:4-182) GTP 80.4 0.38 2.8E-05 45.8 2.9 22 219-240 6-27 (179)
390 d2atxa1 c.37.1.8 (A:9-193) Rho 80.3 0.4 2.9E-05 46.6 3.0 22 219-240 10-31 (185)
391 d1e0sa_ c.37.1.8 (A:) ADP-ribo 80.2 0.32 2.3E-05 46.6 2.2 21 817-837 13-33 (173)
392 d1moza_ c.37.1.8 (A:) ADP-ribo 80.1 0.32 2.3E-05 46.9 2.2 21 816-836 17-37 (182)
393 d2ngra_ c.37.1.8 (A:) CDC42 {H 80.1 0.41 3E-05 46.7 3.1 21 220-240 5-25 (191)
394 d1cr2a_ c.37.1.11 (A:) Gene 4 80.1 0.71 5.2E-05 47.4 5.1 33 817-849 36-72 (277)
395 d2g3ya1 c.37.1.8 (A:73-244) GT 80.1 0.43 3.2E-05 45.7 3.2 21 817-837 4-24 (172)
396 d1c1ya_ c.37.1.8 (A:) Rap1A {H 80.1 0.46 3.4E-05 45.1 3.4 22 817-838 4-25 (167)
397 d1vpla_ c.37.1.12 (A:) Putativ 79.9 0.31 2.2E-05 50.2 2.1 25 219-243 29-53 (238)
398 d1i2ma_ c.37.1.8 (A:) Ran {Hum 79.9 0.23 1.7E-05 47.7 1.1 21 220-240 5-25 (170)
399 d2fu5c1 c.37.1.8 (C:3-175) Rab 79.7 0.29 2.1E-05 46.9 1.8 22 219-240 7-28 (173)
400 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 79.5 0.49 3.6E-05 45.0 3.4 21 818-838 5-25 (170)
401 d1u0la2 c.37.1.8 (A:69-293) Pr 79.3 0.49 3.5E-05 48.2 3.3 24 817-840 96-119 (225)
402 d1byia_ c.37.1.10 (A:) Dethiob 79.3 0.64 4.6E-05 45.5 4.2 33 219-251 2-38 (224)
403 d1xzpa2 c.37.1.8 (A:212-371) T 79.2 0.24 1.8E-05 46.5 1.0 22 818-839 2-23 (160)
404 d1m7ba_ c.37.1.8 (A:) RhoE (RN 79.2 0.5 3.6E-05 45.7 3.3 22 817-838 3-24 (179)
405 d1vpla_ c.37.1.12 (A:) Putativ 79.1 0.45 3.3E-05 48.9 3.1 25 817-841 29-53 (238)
406 d1l7vc_ c.37.1.12 (C:) ABC tra 78.7 0.35 2.6E-05 49.4 2.1 24 817-840 26-49 (231)
407 d1l7vc_ c.37.1.12 (C:) ABC tra 78.7 0.34 2.5E-05 49.5 2.0 24 219-242 26-49 (231)
408 d1mh1a_ c.37.1.8 (A:) Rac {Hum 78.7 0.53 3.9E-05 45.4 3.4 22 817-838 6-27 (183)
409 d1x1ra1 c.37.1.8 (A:10-178) Ra 78.4 0.55 4E-05 44.8 3.3 22 817-838 5-26 (169)
410 d1mo6a1 c.37.1.11 (A:1-269) Re 78.3 0.84 6.1E-05 47.6 5.0 39 816-854 60-101 (269)
411 d1lnza2 c.37.1.8 (A:158-342) O 78.3 0.37 2.7E-05 46.6 2.0 21 219-239 2-22 (185)
412 d1ewqa2 c.37.1.12 (A:542-765) 78.2 1.5 0.00011 44.3 6.9 24 219-242 36-59 (224)
413 d1mo6a1 c.37.1.11 (A:1-269) Re 78.2 0.7 5.1E-05 48.3 4.3 36 218-253 60-98 (269)
414 d1udxa2 c.37.1.8 (A:157-336) O 78.1 0.35 2.6E-05 46.5 1.8 21 219-239 2-22 (180)
415 d1yksa1 c.37.1.14 (A:185-324) 78.0 0.4 2.9E-05 43.3 2.1 25 218-242 7-32 (140)
416 d1udxa2 c.37.1.8 (A:157-336) O 78.0 0.4 2.9E-05 46.1 2.1 21 817-837 2-22 (180)
417 d2fz4a1 c.37.1.19 (A:24-229) D 77.8 0.92 6.7E-05 44.9 5.0 32 219-250 86-117 (206)
418 d2qm8a1 c.37.1.10 (A:5-327) Me 77.7 0.75 5.5E-05 49.3 4.5 39 816-854 51-94 (323)
419 d2atxa1 c.37.1.8 (A:9-193) Rho 77.6 0.59 4.3E-05 45.3 3.3 23 816-838 9-31 (185)
420 d1t9ha2 c.37.1.8 (A:68-298) Pr 77.5 0.29 2.1E-05 50.2 0.9 24 218-241 97-120 (231)
421 d1mkya2 c.37.1.8 (A:173-358) P 77.5 0.57 4.1E-05 45.0 3.1 22 219-240 9-30 (186)
422 d1ihua1 c.37.1.10 (A:1-296) Ar 77.4 1.1 7.9E-05 46.1 5.6 35 816-850 8-45 (296)
423 d1xp8a1 c.37.1.11 (A:15-282) R 77.3 0.86 6.2E-05 47.5 4.7 35 219-253 58-95 (268)
424 d1gm5a3 c.37.1.19 (A:286-549) 77.2 0.81 5.9E-05 47.6 4.4 42 785-840 87-128 (264)
425 d1i2ma_ c.37.1.8 (A:) Ran {Hum 77.1 0.34 2.5E-05 46.4 1.3 21 818-838 5-25 (170)
426 d2ngra_ c.37.1.8 (A:) CDC42 {H 77.1 0.58 4.2E-05 45.5 3.1 22 818-839 5-26 (191)
427 d1ihua1 c.37.1.10 (A:1-296) Ar 76.9 0.97 7E-05 46.5 5.0 36 217-252 7-45 (296)
428 d1lnza2 c.37.1.8 (A:158-342) O 76.9 0.44 3.2E-05 45.9 2.1 21 817-837 2-22 (185)
429 d1zcba2 c.37.1.8 (A:47-75,A:20 76.8 0.57 4.1E-05 45.4 2.9 20 219-238 3-22 (200)
430 d1xp8a1 c.37.1.11 (A:15-282) R 76.8 0.97 7E-05 47.1 4.9 35 817-851 58-95 (268)
431 d1h65a_ c.37.1.8 (A:) Chloropl 76.6 0.6 4.4E-05 48.2 3.2 22 219-240 33-54 (257)
432 d1wp9a1 c.37.1.19 (A:1-200) pu 76.3 0.64 4.7E-05 45.2 3.2 24 219-242 24-47 (200)
433 d2fz4a1 c.37.1.19 (A:24-229) D 76.1 1.2 8.7E-05 44.1 5.2 33 817-849 86-118 (206)
434 d1mkya2 c.37.1.8 (A:173-358) P 76.1 0.6 4.4E-05 44.8 2.8 22 817-838 9-30 (186)
435 d2fu5c1 c.37.1.8 (C:3-175) Rab 76.1 0.42 3.1E-05 45.7 1.7 20 818-837 8-27 (173)
436 g1xew.1 c.37.1.12 (X:,Y:) Smc 75.8 0.73 5.3E-05 48.4 3.7 25 219-243 27-51 (329)
437 d1yksa1 c.37.1.14 (A:185-324) 75.6 0.51 3.7E-05 42.6 2.0 19 816-834 7-25 (140)
438 d1byia_ c.37.1.10 (A:) Dethiob 75.5 1.1 8E-05 43.6 4.7 33 817-849 2-38 (224)
439 g1f2t.1 c.37.1.12 (A:,B:) Rad5 75.2 0.79 5.8E-05 46.7 3.7 24 219-242 24-47 (292)
440 d1t9ha2 c.37.1.8 (A:68-298) Pr 74.6 0.42 3.1E-05 48.9 1.3 25 816-840 97-121 (231)
441 d1wp9a1 c.37.1.19 (A:1-200) pu 74.5 0.78 5.7E-05 44.6 3.2 23 817-839 24-46 (200)
442 d1xpua3 c.37.1.11 (A:129-417) 74.4 0.9 6.5E-05 47.9 3.9 26 217-242 42-67 (289)
443 d2bmja1 c.37.1.8 (A:66-240) Ce 74.2 0.81 5.9E-05 44.1 3.2 22 219-240 6-27 (175)
444 g1ii8.1 c.37.1.12 (A:,B:) Rad5 73.8 0.88 6.4E-05 47.0 3.7 25 218-242 23-47 (369)
445 g1xew.1 c.37.1.12 (X:,Y:) Smc 73.4 0.97 7.1E-05 47.4 3.9 25 817-841 27-51 (329)
446 d1azta2 c.37.1.8 (A:35-65,A:20 73.3 0.78 5.7E-05 46.0 2.9 23 219-241 7-29 (221)
447 g1f2t.1 c.37.1.12 (A:,B:) Rad5 73.2 0.89 6.5E-05 46.3 3.4 23 817-839 24-46 (292)
448 g1ii8.1 c.37.1.12 (A:,B:) Rad5 73.1 0.88 6.4E-05 47.0 3.4 24 816-839 23-46 (369)
449 d2p6ra3 c.37.1.19 (A:1-202) He 72.7 1.3 9.2E-05 43.4 4.3 18 817-834 41-58 (202)
450 d1h65a_ c.37.1.8 (A:) Chloropl 72.4 0.83 6E-05 47.1 3.0 24 816-839 32-55 (257)
451 d1zcba2 c.37.1.8 (A:47-75,A:20 72.3 0.88 6.4E-05 43.9 3.0 20 817-836 3-22 (200)
452 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 72.1 0.91 6.7E-05 43.6 3.1 24 219-242 3-26 (200)
453 d1gkub1 c.37.1.16 (B:1-250) He 71.8 1.7 0.00012 43.6 5.1 24 219-242 59-82 (237)
454 d1qhla_ c.37.1.12 (A:) Cell di 71.6 0.28 2.1E-05 46.8 -1.0 25 219-243 25-49 (222)
455 d1gkub1 c.37.1.16 (B:1-250) He 71.1 1.9 0.00014 43.2 5.4 24 817-840 59-82 (237)
456 d2bmja1 c.37.1.8 (A:66-240) Ce 70.9 1.1 8E-05 43.1 3.3 22 817-838 6-27 (175)
457 d1t5la1 c.37.1.19 (A:2-414) Nu 69.6 3.3 0.00024 45.6 7.3 53 784-851 14-66 (413)
458 d2p6ra3 c.37.1.19 (A:1-202) He 69.0 0.67 4.9E-05 45.6 1.2 18 219-236 41-58 (202)
459 d1azta2 c.37.1.8 (A:35-65,A:20 68.8 1.2 8.4E-05 44.6 3.0 23 817-839 7-29 (221)
460 d1p6xa_ c.37.1.1 (A:) Thymidin 68.4 1.5 0.00011 47.0 4.0 25 219-243 7-31 (333)
461 d1qhla_ c.37.1.12 (A:) Cell di 67.8 0.41 3E-05 45.6 -0.7 25 817-841 25-49 (222)
462 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 67.5 1.4 0.0001 42.1 3.3 23 818-840 4-26 (200)
463 d1p6xa_ c.37.1.1 (A:) Thymidin 66.8 1.4 0.00011 47.2 3.5 25 817-841 7-31 (333)
464 d1svsa1 c.37.1.8 (A:32-60,A:18 65.2 1.5 0.00011 41.7 2.9 23 219-241 3-25 (195)
465 d1ihua2 c.37.1.10 (A:308-586) 64.7 2.7 0.00019 42.8 5.0 34 219-252 21-57 (279)
466 d1e69a_ c.37.1.12 (A:) Smc hea 64.5 1.4 9.9E-05 45.7 2.6 25 219-243 25-49 (308)
467 d1ihua2 c.37.1.10 (A:308-586) 64.1 3.2 0.00024 42.1 5.5 35 817-851 21-58 (279)
468 d1xpua3 c.37.1.11 (A:129-417) 63.9 2.2 0.00016 44.8 4.0 24 817-840 44-67 (289)
469 d1t5la1 c.37.1.19 (A:2-414) Nu 63.4 3.7 0.00027 45.2 6.0 52 187-253 15-66 (413)
470 d1nija1 c.37.1.10 (A:2-223) Hy 62.4 1.8 0.00013 43.3 3.1 24 219-242 4-27 (222)
471 d1e69a_ c.37.1.12 (A:) Smc hea 62.0 1.6 0.00011 45.2 2.5 25 817-841 25-49 (308)
472 d1osna_ c.37.1.1 (A:) Thymidin 62.0 1.9 0.00014 46.2 3.2 27 219-245 6-32 (331)
473 d1tq4a_ c.37.1.8 (A:) Interfer 61.5 3.3 0.00024 45.2 5.2 23 218-240 56-78 (400)
474 d1cp2a_ c.37.1.10 (A:) Nitroge 60.4 2.9 0.00021 42.4 4.3 33 220-252 3-38 (269)
475 d1wb1a4 c.37.1.8 (A:1-179) Elo 60.2 1.9 0.00013 41.4 2.5 22 219-240 6-27 (179)
476 d1tq4a_ c.37.1.8 (A:) Interfer 59.9 5.2 0.00038 43.5 6.6 23 816-838 56-78 (400)
477 d1wb1a4 c.37.1.8 (A:1-179) Elo 59.6 2.1 0.00015 41.0 2.8 22 817-838 6-27 (179)
478 d1nija1 c.37.1.10 (A:2-223) Hy 59.6 2.3 0.00017 42.6 3.2 24 817-840 4-27 (222)
479 d1osna_ c.37.1.1 (A:) Thymidin 59.1 2.2 0.00016 45.6 3.1 25 818-842 7-31 (331)
480 d1svsa1 c.37.1.8 (A:32-60,A:18 58.7 2.4 0.00017 40.2 3.0 22 818-839 4-25 (195)
481 d1cp2a_ c.37.1.10 (A:) Nitroge 57.8 4 0.00029 41.3 4.8 33 818-850 3-38 (269)
482 d1w1wa_ c.37.1.12 (A:) Smc hea 57.8 2.9 0.00021 44.8 3.8 25 219-243 26-50 (427)
483 d2jdid3 c.37.1.11 (D:82-357) C 57.8 2.6 0.00019 43.9 3.2 25 218-242 68-92 (276)
484 d1c4oa1 c.37.1.19 (A:2-409) Nu 56.4 7.2 0.00053 42.6 6.9 52 785-851 12-63 (408)
485 d1e2ka_ c.37.1.1 (A:) Thymidin 55.2 2.3 0.00017 45.4 2.4 26 219-244 5-30 (329)
486 d1oywa2 c.37.1.19 (A:1-206) Re 54.5 4.4 0.00032 39.3 4.3 21 817-837 41-61 (206)
487 d1hyqa_ c.37.1.10 (A:) Cell di 53.2 5.3 0.00038 39.0 4.7 33 220-252 3-39 (232)
488 d1w1wa_ c.37.1.12 (A:) Smc hea 52.9 4 0.00029 43.6 4.0 25 817-841 26-50 (427)
489 d1j3ba1 c.91.1.1 (A:212-529) P 52.7 2.3 0.00017 45.1 1.8 17 817-833 15-31 (318)
490 d2dy1a2 c.37.1.8 (A:8-274) Elo 52.6 4 0.00029 42.1 3.7 26 817-842 3-28 (267)
491 d2olra1 c.91.1.1 (A:228-540) P 51.6 2.6 0.00019 44.5 2.1 17 817-833 15-31 (313)
492 d1e2ka_ c.37.1.1 (A:) Thymidin 50.3 2.9 0.00021 44.6 2.2 25 818-842 6-30 (329)
493 d2olra1 c.91.1.1 (A:228-540) P 49.7 2.9 0.00021 44.2 2.0 17 219-235 15-31 (313)
494 d1j3ba1 c.91.1.1 (A:212-529) P 49.6 2.9 0.00021 44.3 2.0 18 219-236 15-32 (318)
495 d2bv3a2 c.37.1.8 (A:7-282) Elo 49.6 4.6 0.00033 41.9 3.6 27 816-842 6-32 (276)
496 d1g3qa_ c.37.1.10 (A:) Cell di 49.4 7 0.00051 38.1 4.9 33 220-252 4-40 (237)
497 d2dy1a2 c.37.1.8 (A:8-274) Elo 48.9 4.6 0.00033 41.7 3.4 25 219-243 3-27 (267)
498 d1c4oa1 c.37.1.19 (A:2-409) Nu 48.3 9.5 0.00069 41.6 6.2 51 188-253 13-63 (408)
499 d2bv3a2 c.37.1.8 (A:7-282) Elo 48.2 4.7 0.00034 41.8 3.4 25 219-243 7-31 (276)
500 d2bmfa2 c.37.1.14 (A:178-482) 47.9 4.8 0.00035 41.0 3.5 16 218-233 9-24 (305)
No 1
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=3.5e-63 Score=583.35 Aligned_cols=437 Identities=61% Similarity=0.960 Sum_probs=317.5
Q ss_pred hhHHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 171 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 171 ~~~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
.++|.++.++|++.|+||++||+.|+.+++++|+|..+....+....|+|+||+||||||||+||+.||+.++.||+.+|
T Consensus 2 ~ltP~~i~~~Ld~yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~d 81 (443)
T d1g41a_ 2 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 81 (443)
T ss_dssp CCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEee
Confidence 46899999999999999999999999999999999999888887777899999999999999999999999999999999
Q ss_pred ccccccccccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHH
Q psy2392 251 ATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFR 330 (1165)
Q Consensus 251 ~s~~~~~GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1165)
|+.|++.||+|.+.+.++++|++.+.......+...+...+.+.++.++++.++.......... ........+++..+
T Consensus 82 aT~fTeaGYvG~DVesii~~L~~~a~~~v~~~e~~~V~~~~~~~~~e~~~d~l~~~~~~~~~~~--~~~~~~~~~~~~~~ 159 (443)
T d1g41a_ 82 ATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEV--ENHDSHSSTRQAFR 159 (443)
T ss_dssp GGGGC----CCCCTHHHHHHHHHHHHHHHHHHHHHSCC------------------------------------------
T ss_pred cceeeecceeecchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc--ccccchhhhhHHHH
Confidence 9999999999999999999999999888888888888888889999999999987543210000 00112356788899
Q ss_pred HHhhcCCCCCcEEEEEecCCC-CcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHH
Q psy2392 331 KRLREGALDNKEIEIELNDTG-PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEI 409 (1165)
Q Consensus 331 ~~~~~g~l~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (1165)
..++.|++|++.+.+..+... .....++.+++......+..++++.++.+.+.+++.++++++.+...+++++.+...+
T Consensus 160 ~~L~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~i 239 (443)
T d1g41a_ 160 KKLREGQLDDKEIEIDVSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEEL 239 (443)
T ss_dssp -----------------------------------------------------------------CCGGGSCSSCCHHHH
T ss_pred HHHhcCCccccccccccccCCCcccccccccchhhhhhhHHHhhhccCCccccceeeehHHHHHHHHHHHhhhccchhHH
Confidence 999999999999999877653 3334444455555566788889999999999999999999999999999999999999
Q ss_pred HHHHHhhhccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCC
Q psy2392 410 QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDL 489 (1165)
Q Consensus 410 ~~~a~~~~~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l 489 (1165)
...|+..+.+.+++|+||||+++..... ++.+++++|+|+++|+++||++++++||.+.|+|++||++|+|+..+|++|
T Consensus 240 ~~~ai~~v~~~~~~~~dei~k~~~~~~~-~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gl 318 (443)
T d1g41a_ 240 KQKAIDAVEQNGIVFIDEIDKICKKGEY-SGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDL 318 (443)
T ss_dssp HHHHHHHHHHHCEEEEETGGGGSCCSSC-SSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGS
T ss_pred HHHHHHHHhccCccccchhhhhhhcccC-CCCCcccchhhhhhhhhccccccccccccccccchhhccccchhhcccccc
Confidence 9999999999999999999999988664 678999999999999999999999999999999999999999999999999
Q ss_pred chhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHH
Q psy2392 490 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTA 569 (1165)
Q Consensus 490 ~pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ 569 (1165)
+|||+||||++|.|++|++++|.+||++|++++++||+++|+.+|++|.||++|++.||+.|++.|...+++|||+|+++
T Consensus 319 iPEliGRlPi~v~L~~L~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~iA~~A~~~n~~~~~~GAR~Lr~i 398 (443)
T d1g41a_ 319 IPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTV 398 (443)
T ss_dssp CHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHHHHHSCCCGGGHHHHH
T ss_pred hhhhccceEEEEEccCccHHHHHHHHHhhhhhHHHHHHHHHhhcCcEEEEcHHHHHHHHHHHHHhhhhcccCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCe---eEEcccccccccccCcccccccccc
Q psy2392 570 MEKLLEEVSFNSNNIS---LLVDADYVNSRLGDLSINEDLSRYD 610 (1165)
Q Consensus 570 ie~~l~~~~~~~~~~~---~~i~~~~v~~~~~~~~~~~dls~~i 610 (1165)
+|++|++++|++|+.. +.||.++|++.+.+++++.||+|||
T Consensus 399 ~E~~l~~~~f~~p~~~~~~v~Id~~~v~~~l~~~~~~~dl~k~i 442 (443)
T d1g41a_ 399 MERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFI 442 (443)
T ss_dssp HHHHHHHHHHHGGGCTTCEEEECHHHHHHHHTTTTTCHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCEEEECHHHHHhhhhchhhcCCccccc
Confidence 9999999999999864 8999999999999999999999997
No 2
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=2.8e-60 Score=558.64 Aligned_cols=390 Identities=62% Similarity=0.962 Sum_probs=273.4
Q ss_pred hhHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 769 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 769 ~~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
.++|.++.++|+++|+||++||+.+..++++||+|..+....+....|+|+||+||||||||+||+.||+.++.||+.+|
T Consensus 2 ~ltP~~i~~~Ld~yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~d 81 (443)
T d1g41a_ 2 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 81 (443)
T ss_dssp CCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEee
Confidence 46899999999999999999999999999999999999888887777899999999999999999999999999999999
Q ss_pred cCCcccccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCc--ccchhhHHH
Q psy2392 849 ATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNE--NNNISTRQI 926 (1165)
Q Consensus 849 ~se~~~~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~--~~~~~~r~~ 926 (1165)
|+.|++.||+|.+.++++++++..|...+.......+.....+.+..++++.|+....+. ..+.. .....+++.
T Consensus 82 aT~fTeaGYvG~DVesii~~L~~~a~~~v~~~e~~~V~~~~~~~~~e~~~d~l~~~~~~~----~~~~~~~~~~~~~~~~ 157 (443)
T d1g41a_ 82 ATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQ----WGEVENHDSHSSTRQA 157 (443)
T ss_dssp GGGGC----CCCCTHHHHHHHHHHHHHHHHHHHHHSCC------------------------------------------
T ss_pred cceeeecceeecchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccc----ccccccccchhhhhHH
Confidence 999999999999999999999998887777777778888888888999999998753211 01111 125677899
Q ss_pred HHHhhccCCCCCeEEEEEecCCCC-cccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHH
Q psy2392 927 FRKRLREGALDNKEIEIELNDTGP-HMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNED 1005 (1165)
Q Consensus 927 ~~~~l~~g~ld~r~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~ 1005 (1165)
++.+|++|++|++.+.++.+.... ...++++++++.....+..+++...+.+++.+++++++++++|...+.++.++.+
T Consensus 158 ~~~~L~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~ 237 (443)
T d1g41a_ 158 FRKKLREGQLDDKEIEIDVSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPE 237 (443)
T ss_dssp -------------------------------------------------------------------CCGGGSCSSCCHH
T ss_pred HHHHHhcCCccccccccccccCCCcccccccccchhhhhhhHHHhhhccCCccccceeeehHHHHHHHHHHHhhhccchh
Confidence 999999999999999988776543 4555666677777777888888888889999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCC
Q psy2392 1006 EIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 1085 (1165)
Q Consensus 1006 ~~~~~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~ 1085 (1165)
.+...|+..+++.|++|+|||||++..... ++.+++++|+|++|||++||++++|+||.++|+|++|||+|+||..+|+
T Consensus 238 ~i~~~ai~~v~~~~~~~~dei~k~~~~~~~-~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~ 316 (443)
T d1g41a_ 238 ELKQKAIDAVEQNGIVFIDEIDKICKKGEY-SGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPS 316 (443)
T ss_dssp HHHHHHHHHHHHHCEEEEETGGGGSCCSSC-SSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGG
T ss_pred HHHHHHHHHHhccCccccchhhhhhhcccC-CCCCcccchhhhhhhhhccccccccccccccccchhhccccchhhcccc
Confidence 999999999999999999999999988654 6789999999999999999999999999999999999999999999999
Q ss_pred CCchhhhccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhccCcCCceeeccc
Q psy2392 1086 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIVIIY 1163 (1165)
Q Consensus 1086 dl~pel~gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~~~~~~~nigar~ 1163 (1165)
+|+|||+||||++|.|.+|++++|++||+||+|++++||+++|+++||+|.||++|++.||+.|++.|..++|+|||.
T Consensus 317 gliPEliGRlPi~v~L~~L~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~iA~~A~~~n~~~~~~GAR~ 394 (443)
T d1g41a_ 317 DLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARR 394 (443)
T ss_dssp GSCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHHHHHSCCCGGGH
T ss_pred cchhhhccceEEEEEccCccHHHHHHHHHhhhhhHHHHHHHHHhhcCcEEEEcHHHHHHHHHHHHHhhhhcccCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999994
No 3
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=100.00 E-value=5.1e-46 Score=427.30 Aligned_cols=289 Identities=37% Similarity=0.591 Sum_probs=233.3
Q ss_pred hHHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCC----------------CccCCcEEEEEcCCCCCchHHH
Q psy2392 172 LVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQ----------------QEITPKNILMIGPTGVGKTEIA 235 (1165)
Q Consensus 172 ~~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~----------------~~~~~~~~Ll~GPpG~GKT~lA 235 (1165)
.+|.++.+.|++.|+||++||++++.|++++|+|..+...++ +..++++|||+||||||||++|
T Consensus 6 ~tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 6 PAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHH
T ss_pred CCHHHHHHHhCCeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHH
Confidence 489999999999999999999999999999999865432211 1224599999999999999999
Q ss_pred HHHHHHhCCCceEEeccccccccccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccc
Q psy2392 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTD 315 (1165)
Q Consensus 236 k~lA~~l~~~~i~ld~s~~~~~GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 315 (1165)
|+||+.++.+|+++||++|+++||+|++.++.+++++..+..
T Consensus 86 k~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~-------------------------------------- 127 (364)
T d1um8a_ 86 QTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDW-------------------------------------- 127 (364)
T ss_dssp HHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTT--------------------------------------
T ss_pred HHHHhhcccceeehhhhhcccchhhHhhhccchhhhhhhchh--------------------------------------
Confidence 999999999999999999999999999999999999877200
Q ss_pred cCCcCcchhhHHHHHHHhhcCCCCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHH
Q psy2392 316 FNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLL 395 (1165)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (1165)
+
T Consensus 128 --------------------------------------~----------------------------------------- 128 (364)
T d1um8a_ 128 --------------------------------------N----------------------------------------- 128 (364)
T ss_dssp --------------------------------------C-----------------------------------------
T ss_pred --------------------------------------H-----------------------------------------
Confidence 0
Q ss_pred HHHHHHhhcChhHHHHHHHhhhccceEEEEecchhhhccCCCCC-CCccchhhhhhhhcccccCceeee-----------
Q psy2392 396 IDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNN-NTDISRAGVQRDLLPLVEGTTVNT----------- 463 (1165)
Q Consensus 396 ~~~~~~~~~~~~~~~~~a~~~~~~~~IifiDEidki~~~~~~~~-~~~~~~~~vq~~lL~~~Eg~~v~~----------- 463 (1165)
+. .+++||||+|||||+++.+...+ ..|.++++||+.||+++||+.+++
T Consensus 129 ------------------v~-~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~ 189 (364)
T d1um8a_ 129 ------------------VQ-KAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEG 189 (364)
T ss_dssp ------------------HH-HHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC------------
T ss_pred ------------------HH-HhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCceeccCCCCCCcCCcc
Confidence 00 12789999999999998765433 578899999999999999877643
Q ss_pred eceeecCceEEEEEeCCcccC-------------------------------------CCCCCchhhhCCCCeeEecCCC
Q psy2392 464 KYGIIKTDHILFIASGAFHLA-------------------------------------KPSDLIPELQGRFPIRVELDSL 506 (1165)
Q Consensus 464 ~~~~~~t~~ilfI~~gaf~~~-------------------------------------~p~~l~pel~~R~~~~v~~~~L 506 (1165)
+...++|.|++|+++|+|... .+++|+|||+||||++|.|++|
T Consensus 190 ~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~gRi~~iv~f~~L 269 (364)
T d1um8a_ 190 NFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSI 269 (364)
T ss_dssp ---CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHHTTCCEEEECCCC
T ss_pred eeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHHHHhcchhhHhhh
Confidence 234889999999999998510 1356999999999999999999
Q ss_pred CHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhhcccCCCe-
Q psy2392 507 SISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS- 585 (1165)
Q Consensus 507 ~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~~~~~~~~- 585 (1165)
+++++.+|++++.+.+++|++.+++.+|+.|.|+++|+++||+.||+ +++|||+|+++||+++++++|+.|+..
T Consensus 270 ~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d-----~~~GAR~L~riie~~l~~~~f~~p~~~~ 344 (364)
T d1um8a_ 270 SLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALE-----RKTGARGLRAIIEDFCLDIMFDLPKLKG 344 (364)
T ss_dssp CHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHH-----TTCTGGGHHHHHHHHHHHHHHTGGGGTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccC-----CCCCchHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999 689999999999999999999998765
Q ss_pred --eEEcccccccccccCc
Q psy2392 586 --LLVDADYVNSRLGDLS 601 (1165)
Q Consensus 586 --~~i~~~~v~~~~~~~~ 601 (1165)
+.||+++|+..+++++
T Consensus 345 ~~v~I~~~~V~~~~~~~~ 362 (364)
T d1um8a_ 345 SEVRITKDCVLKQAEPLI 362 (364)
T ss_dssp SEEEECHHHHTTSSCCEE
T ss_pred CEEEECHHHhCCCCCCee
Confidence 8999999999887654
No 4
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=7.9e-44 Score=401.41 Aligned_cols=304 Identities=65% Similarity=1.031 Sum_probs=271.4
Q ss_pred hhHHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 171 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 171 ~~~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
+++|+++.+.|++.|+||++||+.|..+++++|+|.++..+.++..+++++||+||||||||+||+++|+.++.+|++++
T Consensus 2 ~~~p~~i~~~L~~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~ 81 (309)
T d1ofha_ 2 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 81 (309)
T ss_dssp CCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHhcCcccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhccc
Confidence 46899999999999999999999999999999999988877765556799999999999999999999999999999999
Q ss_pred ccccccccccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHH
Q psy2392 251 ATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFR 330 (1165)
Q Consensus 251 ~s~~~~~GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1165)
|++|++.+|++...+..++.+|..+.
T Consensus 82 ~s~~~~~~~~~~~~~~~~~~~f~~a~------------------------------------------------------ 107 (309)
T d1ofha_ 82 ATKFTEVGYVGKEVDSIIRDLTDSAG------------------------------------------------------ 107 (309)
T ss_dssp GGGGSSCCSGGGSTTHHHHHHHHTTT------------------------------------------------------
T ss_pred ccccccceeEeeeccccccccchhhh------------------------------------------------------
Confidence 99999888776665777777776520
Q ss_pred HHhhcCCCCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHH
Q psy2392 331 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQ 410 (1165)
Q Consensus 331 ~~~~~g~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (1165)
+
T Consensus 108 -----~-------------------------------------------------------------------------- 108 (309)
T d1ofha_ 108 -----G-------------------------------------------------------------------------- 108 (309)
T ss_dssp -----T--------------------------------------------------------------------------
T ss_pred -----c--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCc
Q psy2392 411 QKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLI 490 (1165)
Q Consensus 411 ~~a~~~~~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~ 490 (1165)
+.....+++|||||||||++++..+ ...+++++|++++||.++||..+++++..++|+|++|||+|+|...+|.+++
T Consensus 109 --~~~~~~~~~IIf~DEIdki~~~~~~-~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~ 185 (309)
T d1ofha_ 109 --AIDAVEQNGIVFIDEIDKICKKGEY-SGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLI 185 (309)
T ss_dssp --CHHHHHHHCEEEEECGGGGSCCSSC-CSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSC
T ss_pred --ccccccCCceEEehhhhhhhhhccC-cccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccchhhcCcccch
Confidence 0000114689999999999987665 4668889999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHH
Q psy2392 491 PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570 (1165)
Q Consensus 491 pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~i 570 (1165)
|+|+|||+.++.|.+|+.+++.+|++.....+..++...+...+..+.+++.+...++..++...+...++|||.|++++
T Consensus 186 p~l~~R~~~~i~~~~~~~~~~~~Il~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaR~L~~~i 265 (309)
T d1ofha_ 186 PELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVM 265 (309)
T ss_dssp HHHHHTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHHTTCEEEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHH
T ss_pred hhhhhhhheeeeccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHhhcchhcCchHHHHHH
Confidence 99999999999999999999999999888888888888899999999999999999999998887777899999999999
Q ss_pred HHHHHHhhcccCCCe---eEEcccccccccccCcccccccccc
Q psy2392 571 EKLLEEVSFNSNNIS---LLVDADYVNSRLGDLSINEDLSRYD 610 (1165)
Q Consensus 571 e~~l~~~~~~~~~~~---~~i~~~~v~~~~~~~~~~~dls~~i 610 (1165)
|+++.+++|..+... +.|+.+++.+.+++++.+.|++||+
T Consensus 266 e~i~~~~~~~~~~~~~~~v~i~~~~v~~~l~~~~~~~d~~kf~ 308 (309)
T d1ofha_ 266 ERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFI 308 (309)
T ss_dssp HHHSHHHHHHGGGCTTCEEEECHHHHHHHTCSSSSCCCCTTSC
T ss_pred HHHHHHHHccccccCCCEEEECHHHHHHhcCCcccccchhhhc
Confidence 999999999887654 8899999999999999999999997
No 5
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=100.00 E-value=3.1e-40 Score=378.94 Aligned_cols=252 Identities=40% Similarity=0.621 Sum_probs=198.6
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCC----------------CCCCCceEEEEccCCCChhHHHH
Q psy2392 771 VIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQ----------------QEITPKNILMIGPTGVGKTEIAR 834 (1165)
Q Consensus 771 ~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~----------------~~~~~~~iLL~GPpG~GKT~lAk 834 (1165)
+|.++.+.|+++|+||++||+.++.+++++|+|......++ +..++++|||+||||||||++||
T Consensus 7 tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk 86 (364)
T d1um8a_ 7 APKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQ 86 (364)
T ss_dssp CHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHH
T ss_pred CHHHHHHHhCCeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHH
Confidence 79999999999999999999999999999988754322211 12347999999999999999999
Q ss_pred HHHHHcCCCeEEEecCCcccccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCcccc
Q psy2392 835 RLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDF 914 (1165)
Q Consensus 835 ~lA~~l~~~fi~l~~se~~~~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~ 914 (1165)
+||+.++.||+++||++|+++||+|++.++.+++++..+...
T Consensus 87 ~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~-------------------------------------- 128 (364)
T d1um8a_ 87 TLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWN-------------------------------------- 128 (364)
T ss_dssp HHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTC--------------------------------------
T ss_pred HHHhhcccceeehhhhhcccchhhHhhhccchhhhhhhchhH--------------------------------------
Confidence 999999999999999999999999999999998886544000
Q ss_pred CCcccchhhHHHHHHhhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHH
Q psy2392 915 NNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLI 994 (1165)
Q Consensus 915 ~~~~~~~~~r~~~~~~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~ 994 (1165)
T Consensus 129 -------------------------------------------------------------------------------- 128 (364)
T d1um8a_ 129 -------------------------------------------------------------------------------- 128 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCHHHHHHHHHHhhhcCCeeeehhhhhhhccCCC-CCCCCccchhhhhhccccccCcccee-----------e
Q psy2392 995 DEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQ-NNNTDISRAGVQRDLLPLVEGTTVNT-----------K 1062 (1165)
Q Consensus 995 ~~~~~~~~~~~~~~~~a~~~~~~~gIvfiDEiDki~~~~~~-~~~~~~~~~gvq~~lL~~~Eg~~v~~-----------k 1062 (1165)
+ +.+ +.||||+|||||++..+.. ....|+++++||+.||+++||+.+++ .
T Consensus 129 ------------v-~~~-----~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~ 190 (364)
T d1um8a_ 129 ------------V-QKA-----QKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGN 190 (364)
T ss_dssp ------------H-HHH-----TTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC-------------
T ss_pred ------------H-HHh-----hcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCceeccCCCCCCcCCcce
Confidence 1 222 7899999999999987543 23467899999999999999877643 2
Q ss_pred eeeccCceEEEEecCCCCC-------------------------------------CCCCCCchhhhccCCeEEEcCCCC
Q psy2392 1063 YGIIKTDHILFIASGAFHL-------------------------------------AKPSDLIPELQGRFPIRVELDSLS 1105 (1165)
Q Consensus 1063 ~~~~~t~~ilfI~~gaf~~-------------------------------------~~p~dl~pel~gR~~i~v~l~~l~ 1105 (1165)
...++|.|++|+++|+|.. ..+++|+|||+||||++|.|.+|+
T Consensus 191 ~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~ 270 (364)
T d1um8a_ 191 FIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSIS 270 (364)
T ss_dssp --CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHHTTCCEEEECCCCC
T ss_pred eEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHHHHhcchhhHhhhh
Confidence 4589999999999999951 014569999999999999999999
Q ss_pred HHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhccCcCCceeeccc
Q psy2392 1106 ISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIVIIY 1163 (1165)
Q Consensus 1106 ~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~~~~~~~nigar~ 1163 (1165)
++++.+||++|.+++++||+.+|+.+|++|+|||+|+++||+.||+. |+|||.
T Consensus 271 ~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~-----~~GAR~ 323 (364)
T d1um8a_ 271 LEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALER-----KTGARG 323 (364)
T ss_dssp HHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHT-----TCTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCC-----CCCchH
Confidence 99999999999999999999999999999999999999999999997 777774
No 6
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=1.6e-38 Score=357.90 Aligned_cols=259 Identities=67% Similarity=1.032 Sum_probs=230.5
Q ss_pred hhHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 769 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 769 ~~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
.++|+++.+.|++.|+||++|++.+..++.++|++.++..+.++..+++++||+||||||||++|+++|+.++.+|+.++
T Consensus 2 ~~~p~~i~~~L~~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~ 81 (309)
T d1ofha_ 2 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 81 (309)
T ss_dssp CCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHhcCcccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhccc
Confidence 46899999999999999999999999999999999888776654445799999999999999999999999999999999
Q ss_pred cCCcccccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHH
Q psy2392 849 ATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFR 928 (1165)
Q Consensus 849 ~se~~~~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~ 928 (1165)
+++|++.+|++...+..++.+|..|...
T Consensus 82 ~s~~~~~~~~~~~~~~~~~~~f~~a~~~---------------------------------------------------- 109 (309)
T d1ofha_ 82 ATKFTEVGYVGKEVDSIIRDLTDSAGGA---------------------------------------------------- 109 (309)
T ss_dssp GGGGSSCCSGGGSTTHHHHHHHHTTTTC----------------------------------------------------
T ss_pred ccccccceeEeeeccccccccchhhhcc----------------------------------------------------
Confidence 9999998877666677788877554111
Q ss_pred HhhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHH
Q psy2392 929 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQ 1008 (1165)
Q Consensus 929 ~~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~ 1008 (1165)
T Consensus 110 -------------------------------------------------------------------------------- 109 (309)
T d1ofha_ 110 -------------------------------------------------------------------------------- 109 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCc
Q psy2392 1009 QKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLI 1088 (1165)
Q Consensus 1009 ~~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~ 1088 (1165)
.....+++|||||||||++....+ .+.+++.+|+|++||.++||..++.++..+.|+|++|||+|+|...+|+++.
T Consensus 110 ---~~~~~~~~IIf~DEIdki~~~~~~-~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~ 185 (309)
T d1ofha_ 110 ---IDAVEQNGIVFIDEIDKICKKGEY-SGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLI 185 (309)
T ss_dssp ---HHHHHHHCEEEEECGGGGSCCSSC-CSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSC
T ss_pred ---cccccCCceEEehhhhhhhhhccC-cccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccchhhcCcccch
Confidence 000114689999999999976543 5678899999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhccCcCCceeeccc
Q psy2392 1089 PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIVIIY 1163 (1165)
Q Consensus 1089 pel~gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~~~~~~~nigar~ 1163 (1165)
|+|+|||+.++.|.+|+.+++.+|++...+.+..++...+..++..+.+++++....+..++...+.+.|.|||.
T Consensus 186 p~l~~R~~~~i~~~~~~~~~~~~Il~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaR~ 260 (309)
T d1ofha_ 186 PELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARR 260 (309)
T ss_dssp HHHHHTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHHTTCEEEECHHHHHHHHHHHHHHHHHSCCCTTHH
T ss_pred hhhhhhhheeeeccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHhhcchhcCchH
Confidence 999999999999999999999999999888899999999999999999999999999999999988889999984
No 7
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.2e-32 Score=308.25 Aligned_cols=238 Identities=23% Similarity=0.378 Sum_probs=201.5
Q ss_pred hhHHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 171 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 171 ~~~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
..++.++.+.|++.|+||++|++.|+.++... +.++.++.+|. +++||+||||||||+||++||+.++.+|+++|
T Consensus 10 ~~~l~~l~~~L~~~viGQ~~a~~~v~~~v~~~--~~~l~~~~~p~---~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d 84 (315)
T d1r6bx3 10 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA--RAGLGHEHKPV---GSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 84 (315)
T ss_dssp HHHHHHHHHHHTTTSCSCHHHHHHHHHHHHHH--HTTCSCTTSCS---EEEEEECSTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCeecChHHHHHHHHHHHHHH--HccCCCCCCCc---eEEEEECCCcchhHHHHHHHHhhccCCeeEec
Confidence 46789999999999999999999999999876 77787777664 79999999999999999999999999999999
Q ss_pred ccccccc-----------cccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCc
Q psy2392 251 ATKFTEV-----------GYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNE 319 (1165)
Q Consensus 251 ~s~~~~~-----------GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 319 (1165)
|++|.++ ||+|+..++.+...+..
T Consensus 85 ~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~~~--------------------------------------------- 119 (315)
T d1r6bx3 85 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK--------------------------------------------- 119 (315)
T ss_dssp GGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHHHH---------------------------------------------
T ss_pred cccccchhhhhhhcccCCCccccccCChhhHHHHh---------------------------------------------
Confidence 9999874 45555444333222211
Q ss_pred CcchhhHHHHHHHhhcCCCCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHH
Q psy2392 320 NNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 399 (1165)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1165)
T Consensus 120 -------------------------------------------------------------------------------- 119 (315)
T d1r6bx3 120 -------------------------------------------------------------------------------- 119 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcChhHHHHHHHhhhccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeece-eecCceEEEEEe
Q psy2392 400 ANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG-IIKTDHILFIAS 478 (1165)
Q Consensus 400 ~~~~~~~~~~~~~a~~~~~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~-~~~t~~ilfI~~ 478 (1165)
.+++||++|||||+++. ||+.||+++|.+.++...| .++.+|.++|++
T Consensus 120 ------------------~~~~vvl~DeieKa~~~-------------V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~T 168 (315)
T d1r6bx3 120 ------------------HPHAVLLLDEIEKAHPD-------------VFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 168 (315)
T ss_dssp ------------------CSSEEEEEETGGGSCHH-------------HHHHHHHHHHHSEEEETTTEEEECTTEEEEEE
T ss_pred ------------------Cccchhhhcccccccch-------------HhhhhHHhhccceecCCCCCccCccceEEEec
Confidence 27899999999999876 8899999999888887766 789999999998
Q ss_pred CCcccCC------------C---------CCCchhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCee
Q psy2392 479 GAFHLAK------------P---------SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKI 537 (1165)
Q Consensus 479 gaf~~~~------------p---------~~l~pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l 537 (1165)
.+..... . ..|.|||++||+.+|.|.+|+.+++.+|+ ...+.++...+...++.+
T Consensus 169 snig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~----~~~l~~~~~~l~~~~i~l 244 (315)
T d1r6bx3 169 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV----DKFIVELQVQLDQKGVSL 244 (315)
T ss_dssp ECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHH----HHHHHHHHHHHHHTTEEE
T ss_pred cchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHH----HHHHHHHHHHHHhcCcch
Confidence 6643111 0 12899999999999999999999999999 567788888899999999
Q ss_pred EeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhh
Q psy2392 538 EFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVS 578 (1165)
Q Consensus 538 ~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~ 578 (1165)
.++++|+++|++.+|+ +.+|||+|+++|++.+++..
T Consensus 245 ~~~~~a~~~l~~~~yd-----~~~GaR~L~r~Ie~~i~~~l 280 (315)
T d1r6bx3 245 EVSQEARNWLAEKGYD-----RAMGARPMARVIQDNLKKPL 280 (315)
T ss_dssp EECHHHHHHHHHHHCB-----TTTBTTTHHHHHHHHHTHHH
T ss_pred hhHHHHHHHHHHhCCC-----CCCChhhHHHHHHHHHHHHH
Confidence 9999999999999998 68999999999998887653
No 8
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=8.5e-32 Score=303.20 Aligned_cols=246 Identities=27% Similarity=0.402 Sum_probs=199.2
Q ss_pred Cchhhhhh-hhHHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHH
Q psy2392 163 MPDEIIKK-SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 163 ~~~~i~~~-~~~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
|.+.+.+. ..++..+++.|++.|+||++|++.|..++... +.++.++.+|. +++||+||||||||++|+.||+.
T Consensus 2 p~~~~~~~~~~~l~~l~~~L~~~v~GQ~~ai~~v~~~i~~~--~~~l~~~~kp~---~~~lf~Gp~G~GKt~lak~la~~ 76 (315)
T d1qvra3 2 PVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRA--RAGLKDPNRPI---GSFLFLGPTGVGKTELAKTLAAT 76 (315)
T ss_dssp HHHHTTCCHHHHHHSHHHHHHHHSCSCHHHHHHHHHHHHHH--GGGCSCSSSCS---EEEEEBSCSSSSHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHhcCeEeCHHHHHHHHHHHHHHH--hcCCCCCCCCc---eEEEEECCCcchHHHHHHHHHHH
Confidence 44444443 37788999999999999999999999999876 67777776664 68999999999999999999999
Q ss_pred h---CCCceEEecccccc-----------ccccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCC
Q psy2392 242 S---NAPFIKIEATKFTE-----------VGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSK 307 (1165)
Q Consensus 242 l---~~~~i~ld~s~~~~-----------~GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 307 (1165)
+ +.+|+++||++|.+ |||+|+..++.+.+.+..
T Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~~~--------------------------------- 123 (315)
T d1qvra3 77 LFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRR--------------------------------- 123 (315)
T ss_dssp HHSSGGGEEEECTTTCCSSGGGGGC--------------CHHHHHHH---------------------------------
T ss_pred hcCCCcceEEEeccccccchhhhhhcCCCCCCcCcccCChHHHHHHh---------------------------------
Confidence 8 68999999999976 578887655544433322
Q ss_pred cCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceee
Q psy2392 308 EKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIK 387 (1165)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (1165)
T Consensus 124 -------------------------------------------------------------------------------- 123 (315)
T d1qvra3 124 -------------------------------------------------------------------------------- 123 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeece-
Q psy2392 388 IREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG- 466 (1165)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~- 466 (1165)
.+++|||+|||||+++. ||+.||+++|.+.++...|
T Consensus 124 ------------------------------~p~~Vvl~DEieK~~~~-------------v~~~ll~~l~~g~~~~~~gr 160 (315)
T d1qvra3 124 ------------------------------RPYSVILFDEIEKAHPD-------------VFNILLQILDDGRLTDSHGR 160 (315)
T ss_dssp ------------------------------CSSEEEEESSGGGSCHH-------------HHHHHHHHHTTTEECCSSSC
T ss_pred ------------------------------CCCcEEEEehHhhcCHH-------------HHHHHHHHhccCceeCCCCc
Confidence 26899999999999876 8889999999988876554
Q ss_pred eecCceEEEEEeCCcccC----------------------CCCCCchhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHH
Q psy2392 467 IIKTDHILFIASGAFHLA----------------------KPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTK 524 (1165)
Q Consensus 467 ~~~t~~ilfI~~gaf~~~----------------------~p~~l~pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~ 524 (1165)
.++++|.+||+++++... -...|.|||++||+.++.|.+|+.+++.+|+. ..+.
T Consensus 161 ~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~----~~l~ 236 (315)
T d1qvra3 161 TVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVE----IQLS 236 (315)
T ss_dssp CEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHH----HHHH
T ss_pred EecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHH----HHHH
Confidence 689999999999886421 02359999999999999999999999999994 5566
Q ss_pred HHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhh
Q psy2392 525 QYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVS 578 (1165)
Q Consensus 525 ~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~ 578 (1165)
++...+...++.+.++++++++|++.+|+ +.+|||+|+++|++.+.+..
T Consensus 237 ~l~~rl~~~~i~l~i~~~~~~~L~~~~y~-----~~~GAR~L~r~Ie~~i~~~L 285 (315)
T d1qvra3 237 YLRARLAEKRISLELTEAAKDFLAERGYD-----PVFGARPLRRVIQRELETPL 285 (315)
T ss_dssp HHHHHHHTTTCEEEECHHHHHHHHHHHCB-----TTTBTSTHHHHHHHHTHHHH
T ss_pred HHHHHHHhccccccccHHHHHHHHHhCCC-----CCCCcchHHHHHHHHHHHHH
Confidence 67777889999999999999999999998 69999999999999887654
No 9
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=2.9e-27 Score=266.13 Aligned_cols=227 Identities=22% Similarity=0.361 Sum_probs=185.2
Q ss_pred hhhHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEE
Q psy2392 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 847 (1165)
Q Consensus 768 ~~~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l 847 (1165)
+..++.++++.|++.|+||++|++.+..++... +.++.++.+| .+++||+||||||||+||++||+.++.||+++
T Consensus 9 d~~~l~~l~~~L~~~viGQ~~a~~~v~~~v~~~--~~~l~~~~~p---~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~ 83 (315)
T d1r6bx3 9 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA--RAGLGHEHKP---VGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 83 (315)
T ss_dssp HHHHHHHHHHHHTTTSCSCHHHHHHHHHHHHHH--HTTCSCTTSC---SEEEEEECSTTSSHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHhCCeecChHHHHHHHHHHHHHH--HccCCCCCCC---ceEEEEECCCcchhHHHHHHHHhhccCCeeEe
Confidence 356788999999999999999999999999876 6667665554 47899999999999999999999999999999
Q ss_pred ecCCccccc-----------ccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCC
Q psy2392 848 EATKFTEVG-----------YVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNN 916 (1165)
Q Consensus 848 ~~se~~~~G-----------yvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~ 916 (1165)
||++|.+.+ |+|+..++.+.+.+
T Consensus 84 d~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~---------------------------------------------- 117 (315)
T d1r6bx3 84 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV---------------------------------------------- 117 (315)
T ss_dssp EGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHH----------------------------------------------
T ss_pred ccccccchhhhhhhcccCCCccccccCChhhHHH----------------------------------------------
Confidence 999998754 33333222221110
Q ss_pred cccchhhHHHHHHhhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHH
Q psy2392 917 ENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDE 996 (1165)
Q Consensus 917 ~~~~~~~r~~~~~~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~ 996 (1165)
T Consensus 118 -------------------------------------------------------------------------------- 117 (315)
T d1r6bx3 118 -------------------------------------------------------------------------------- 117 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCCHHHHHHHHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeee-eccCceEEEEe
Q psy2392 997 EANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG-IIKTDHILFIA 1075 (1165)
Q Consensus 997 ~~~~~~~~~~~~~~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~-~~~t~~ilfI~ 1075 (1165)
. ..+.+||++|||||.... ||+.||.++|.+.++...| .++..|.++|+
T Consensus 118 ------------~-----~~~~~vvl~DeieKa~~~-------------V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~ 167 (315)
T d1r6bx3 118 ------------I-----KHPHAVLLLDEIEKAHPD-------------VFNILLQVMDNGTLTDNNGRKADFRNVVLVM 167 (315)
T ss_dssp ------------H-----HCSSEEEEEETGGGSCHH-------------HHHHHHHHHHHSEEEETTTEEEECTTEEEEE
T ss_pred ------------H-----hCccchhhhcccccccch-------------HhhhhHHhhccceecCCCCCccCccceEEEe
Confidence 0 125789999999998765 9999999999988877666 68889999998
Q ss_pred cCCCCCC---CC------------------CCCchhhhccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCc
Q psy2392 1076 SGAFHLA---KP------------------SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIK 1134 (1165)
Q Consensus 1076 ~gaf~~~---~p------------------~dl~pel~gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~ 1134 (1165)
+...... +. ..|.|||++|++.+|.|.||+.+++.+|+. ..+.++...+...+++
T Consensus 168 Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~----~~l~~~~~~l~~~~i~ 243 (315)
T d1r6bx3 168 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD----KFIVELQVQLDQKGVS 243 (315)
T ss_dssp EECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHH----HHHHHHHHHHHHTTEE
T ss_pred ccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHH----HHHHHHHHHHHhcCcc
Confidence 7553311 10 128899999999999999999999999998 7788888899999999
Q ss_pred eEeCHHHHHHHHHHHhccCcCCcee
Q psy2392 1135 IEFVDDGIQRLAEIAYCINERTENI 1159 (1165)
Q Consensus 1135 l~~~~~ai~~ia~~a~~~~~~~~ni 1159 (1165)
+.++++|+++|++.+|+.+.|++.+
T Consensus 244 l~~~~~a~~~l~~~~yd~~~GaR~L 268 (315)
T d1r6bx3 244 LEVSQEARNWLAEKGYDRAMGARPM 268 (315)
T ss_dssp EEECHHHHHHHHHHHCBTTTBTTTH
T ss_pred hhhHHHHHHHHHHhCCCCCCChhhH
Confidence 9999999999999999985555443
No 10
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.94 E-value=8.5e-27 Score=262.11 Aligned_cols=228 Identities=27% Similarity=0.389 Sum_probs=181.5
Q ss_pred hhhHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHc---CCCe
Q psy2392 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS---NAPF 844 (1165)
Q Consensus 768 ~~~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l---~~~f 844 (1165)
+..+...|++.|++.|+||++|++.+..++... +.++.++.+| ..++||+||||||||++|+.||+.+ +.+|
T Consensus 10 ~~~~l~~l~~~L~~~v~GQ~~ai~~v~~~i~~~--~~~l~~~~kp---~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~ 84 (315)
T d1qvra3 10 EREKLLRLEEELHKRVVGQDEAIRAVADAIRRA--RAGLKDPNRP---IGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 84 (315)
T ss_dssp HHHHHHSHHHHHHHHSCSCHHHHHHHHHHHHHH--GGGCSCSSSC---SEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGE
T ss_pred HHHHHHHHHHHhcCeEeCHHHHHHHHHHHHHHH--hcCCCCCCCC---ceEEEEECCCcchHHHHHHHHHHHhcCCCcce
Confidence 466778999999999999999999999999865 6667666554 4689999999999999999999998 6889
Q ss_pred EEEecCCccc-----------ccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccc
Q psy2392 845 IKIEATKFTE-----------VGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTD 913 (1165)
Q Consensus 845 i~l~~se~~~-----------~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~ 913 (1165)
+++||++|.+ +||+|+..++.+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~------------------------------------------- 121 (315)
T d1qvra3 85 IRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAV------------------------------------------- 121 (315)
T ss_dssp EEECTTTCCSSGGGGGC--------------CHHHHH-------------------------------------------
T ss_pred EEEeccccccchhhhhhcCCCCCCcCcccCChHHHHH-------------------------------------------
Confidence 9999999986 4677765433222211
Q ss_pred cCCcccchhhHHHHHHhhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHH
Q psy2392 914 FNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLL 993 (1165)
Q Consensus 914 ~~~~~~~~~~r~~~~~~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l 993 (1165)
T Consensus 122 -------------------------------------------------------------------------------- 121 (315)
T d1qvra3 122 -------------------------------------------------------------------------------- 121 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCHHHHHHHHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeee-eccCceEE
Q psy2392 994 IDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG-IIKTDHIL 1072 (1165)
Q Consensus 994 ~~~~~~~~~~~~~~~~~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~-~~~t~~il 1072 (1165)
+ ..+.+|||+|||||.... ||+.||+++|.+.++...| .+++.|.+
T Consensus 122 ---------------~-----~~p~~Vvl~DEieK~~~~-------------v~~~ll~~l~~g~~~~~~gr~v~~~~~i 168 (315)
T d1qvra3 122 ---------------R-----RRPYSVILFDEIEKAHPD-------------VFNILLQILDDGRLTDSHGRTVDFRNTV 168 (315)
T ss_dssp ---------------H-----HCSSEEEEESSGGGSCHH-------------HHHHHHHHHTTTEECCSSSCCEECTTEE
T ss_pred ---------------H-----hCCCcEEEEehHhhcCHH-------------HHHHHHHHhccCceeCCCCcEecCcceE
Confidence 0 015789999999998765 9999999999987765545 69999999
Q ss_pred EEecCCCCCC---------C-------------CCCCchhhhccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhh
Q psy2392 1073 FIASGAFHLA---------K-------------PSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLAT 1130 (1165)
Q Consensus 1073 fI~~gaf~~~---------~-------------p~dl~pel~gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~ 1130 (1165)
||+++++... . ...|.|||++||+.++.|.+|+.+++.+|+. ..+.+++..+..
T Consensus 169 ~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~----~~l~~l~~rl~~ 244 (315)
T d1qvra3 169 IILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVE----IQLSYLRARLAE 244 (315)
T ss_dssp EEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHH----HHHHHHHHHHHT
T ss_pred EEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHH----HHHHHHHHHHHh
Confidence 9999987421 0 1348999999999999999999999999999 566777777888
Q ss_pred cCCceEeCHHHHHHHHHHHhccCcCCceee
Q psy2392 1131 EGIKIEFVDDGIQRLAEIAYCINERTENIV 1160 (1165)
Q Consensus 1131 egv~l~~~~~ai~~ia~~a~~~~~~~~nig 1160 (1165)
.++++.++++++++|++.+|+.+.||+.+.
T Consensus 245 ~~i~l~i~~~~~~~L~~~~y~~~~GAR~L~ 274 (315)
T d1qvra3 245 KRISLELTEAAKDFLAERGYDPVFGARPLR 274 (315)
T ss_dssp TTCEEEECHHHHHHHHHHHCBTTTBTSTHH
T ss_pred ccccccccHHHHHHHHHhCCCCCCCcchHH
Confidence 999999999999999999999966655543
No 11
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.93 E-value=9.5e-26 Score=246.83 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=89.9
Q ss_pred eeecCCcccccCCccccccccccCcchHHHHhhhhcccccccCCCHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHH
Q psy2392 623 SVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQG-----NLMRASVELA 697 (1165)
Q Consensus 623 aLaRG~l~~IGATT~~Eyr~~IekD~Al~RR~lFq~~Vi~v~EPs~edT~~IL~glk~~yE~~h~-----~aL~aav~LS 697 (1165)
+|+||+++|||+||++||++|+++|+||.|| |+ +|. |+||+.++|..||++++..||.||+ +|++++|+||
T Consensus 142 ~L~rg~i~vIgatT~eey~~~~e~d~al~rr--F~-~I~-V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls 217 (268)
T d1r6bx2 142 LLSSGKIRVIGSTTYQEFSNIFEKDRALARR--FQ-KID-ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 217 (268)
T ss_dssp CSSSCCCEEEEEECHHHHHCCCCCTTSSGGG--EE-EEE-CCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHhCCCCeEEEeCCHHHHHHHHhhcHHHHhh--hc-ccc-cCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHH
Confidence 4679999999999999999999999999999 99 676 9999999999999999999999999 9999999999
Q ss_pred HHHhcccccchHH--HHhhhhhhhhhh
Q psy2392 698 KEWRNDRTLRRLE--AMLLTANRETTL 722 (1165)
Q Consensus 698 ~ryi~~R~lPDkd--lid~a~a~~~~~ 722 (1165)
+||+++|+||||+ ++|++++..+..
T Consensus 218 ~ryi~~~~~PdKAIdllDea~a~~~~~ 244 (268)
T d1r6bx2 218 VKYINDRHLPDKAIDVIDEAGARARLM 244 (268)
T ss_dssp HHHCTTSCTTHHHHHHHHHHHHHHHHS
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHhh
Confidence 9999999999975 588888887764
No 12
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.92 E-value=4.4e-26 Score=262.15 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=89.1
Q ss_pred eeecCCcccccCCccccccccccCcchHHHHhhhhcccccccCCCHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHH
Q psy2392 623 SVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQG-----NLMRASVELA 697 (1165)
Q Consensus 623 aLaRG~l~~IGATT~~Eyr~~IekD~Al~RR~lFq~~Vi~v~EPs~edT~~IL~glk~~yE~~h~-----~aL~aav~LS 697 (1165)
+|+||+++||||||++||++ |++|+||.|| || +|. |.||+.++|+.||++++..||.||+ +||.+||+||
T Consensus 146 ~L~rg~~~~I~~tT~~ey~~-~e~d~al~rr--F~-~v~-v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls 220 (387)
T d1qvra2 146 ALARGELRLIGATTLDEYRE-IEKDPALERR--FQ-PVY-VDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLS 220 (387)
T ss_dssp HHHTTCCCEEEEECHHHHHH-HTTCTTTCSC--CC-CEE-ECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHH
T ss_pred HHhCCCcceeeecCHHHHHH-hcccHHHHHh--cc-ccc-CCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhc
Confidence 46799999999999999986 7999999999 99 677 9999999999999999999999999 9999999999
Q ss_pred HHHhcccccchHH--HHhhhhhhhhhhh
Q psy2392 698 KEWRNDRTLRRLE--AMLLTANRETTLI 723 (1165)
Q Consensus 698 ~ryi~~R~lPDkd--lid~a~a~~~~~~ 723 (1165)
+||+++|+||||+ ++|++|++.++..
T Consensus 221 ~ryi~~r~~PdKAidlld~a~a~~~i~~ 248 (387)
T d1qvra2 221 HRYITERRLPDKAIDLIDEAAARLRMAL 248 (387)
T ss_dssp HHHCCSSCTHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccChhhHHHHHHHHHHHHHhhc
Confidence 9999999999964 5899999888743
No 13
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.91 E-value=2.3e-26 Score=264.46 Aligned_cols=114 Identities=18% Similarity=0.254 Sum_probs=92.2
Q ss_pred CccccccCcccccceee--eeecCCeEEEEccCHHHHHHhhhccchhhhhhccccceEEecCCCHHHHHHHHHHHHHHHH
Q psy2392 8 SSAKDSGMEKFQGTTIL--SVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANLE 85 (1165)
Q Consensus 8 ~~~~~~~~~~~~~~~~l--aLARGel~~IgATT~~Eyr~~IekD~Al~RR~lFq~~V~~v~Eps~~~t~~IL~gl~~~yE 85 (1165)
-|||.++ +.||++|+| +|+||+|+||||||++||++ ||+|+||.|| || +|. |+|||.++|+.||++++++||
T Consensus 128 ~~~g~~~-g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rr--F~-~v~-v~ep~~~~~~~il~~~~~~~e 201 (387)
T d1qvra2 128 VGAGKAE-GAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERR--FQ-PVY-VDEPTVEETISILRGLKEKYE 201 (387)
T ss_dssp -----------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSC--CC-CEE-ECCCCHHHHHHHHHHHHHHHH
T ss_pred hcCCCCC-CcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHh--cc-ccc-CCCCcHHHHHHHHHHHHHHHH
Confidence 3555544 469999999 99999999999999999986 7999999999 99 675 999999999999999999999
Q ss_pred HHhh-----HHHHHHHHHHHhhcCCCCchhHHH--HHhhhhhhhhhhcc
Q psy2392 86 KHQG-----NLMRASVELAKEWRNDRTLRRLEA--MLLTANRETTLIIT 127 (1165)
Q Consensus 86 ~~h~-----~al~~~v~ls~rYi~~r~lPDkal--ld~a~a~~~~~~~~ 127 (1165)
.||+ +||.+||.||+|||++|+|||||+ +|+||+++++...+
T Consensus 202 ~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a~a~~~i~~~s 250 (387)
T d1qvra2 202 VHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALES 250 (387)
T ss_dssp HHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHHHHHHHHTTTT
T ss_pred hccCCcccHHHHHHHHHhcccccccccChhhHHHHHHHHHHHHHhhccC
Confidence 9999 999999999999999999999854 99999999986433
No 14
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=2.3e-24 Score=235.77 Aligned_cols=114 Identities=20% Similarity=0.300 Sum_probs=106.4
Q ss_pred CCccccccCcccccceee--eeecCCeEEEEccCHHHHHHhhhccchhhhhhccccceEEecCCCHHHHHHHHHHHHHHH
Q psy2392 7 VSSAKDSGMEKFQGTTIL--SVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANL 84 (1165)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l--aLARGel~~IgATT~~Eyr~~IekD~Al~RR~lFq~~V~~v~Eps~~~t~~IL~gl~~~y 84 (1165)
.-++|.+..+.+|.+|+| +|+||+|+||||||++||++|+++||||.|| |+ +|. |+|||.++|+.||++++++|
T Consensus 122 l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~~~~e~d~al~rr--F~-~I~-V~Eps~e~t~~IL~~~~~~~ 197 (268)
T d1r6bx2 122 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR--FQ-KID-ITEPSIEETVQIINGLKPKY 197 (268)
T ss_dssp TTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHHCCCCCTTSSGGG--EE-EEE-CCCCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCccccHHHHhhHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHhh--hc-ccc-cCCCCHHHHHHHHHHhhHHH
Confidence 456677777789999999 9999999999999999999999999999999 99 565 99999999999999999999
Q ss_pred HHHhh-----HHHHHHHHHHHhhcCCCCchhHH--HHHhhhhhhhhh
Q psy2392 85 EKHQG-----NLMRASVELAKEWRNDRTLRRLE--AMLLTANRETTL 124 (1165)
Q Consensus 85 E~~h~-----~al~~~v~ls~rYi~~r~lPDka--lld~a~a~~~~~ 124 (1165)
|.||+ +||+.||.||+||+++|+||||| ++|+||++.+..
T Consensus 198 e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdllDea~a~~~~~ 244 (268)
T d1r6bx2 198 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 244 (268)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHHHHHHS
T ss_pred hccCCEEeChHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHhh
Confidence 99999 99999999999999999999985 489999999874
No 15
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.85 E-value=4.5e-21 Score=208.99 Aligned_cols=215 Identities=25% Similarity=0.388 Sum_probs=155.4
Q ss_pred ccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccccccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR 262 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~GyvG~ 262 (1165)
++|+|.+.+++.|.+.+.. +++.......+.. .|.++||+||||||||++|+++|++++.+++.++++++.++ |+|.
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~-~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~-~~g~ 88 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEY-LREPSRFQKLGGK-IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM-FVGV 88 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHH-HHCGGGC-----C-CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTS-CCCC
T ss_pred HHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCC-CCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhc-chhH
Confidence 5899999999999887643 4444333332221 35899999999999999999999999999999999999875 9998
Q ss_pred chhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcE
Q psy2392 263 DVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKE 342 (1165)
Q Consensus 263 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 342 (1165)
+ +..++.+|+.+
T Consensus 89 ~-~~~l~~~f~~A------------------------------------------------------------------- 100 (256)
T d1lv7a_ 89 G-ASRVRDMFEQA------------------------------------------------------------------- 100 (256)
T ss_dssp C-HHHHHHHHHHH-------------------------------------------------------------------
T ss_pred H-HHHHHHHHHHH-------------------------------------------------------------------
Confidence 8 44566666552
Q ss_pred EEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceE
Q psy2392 343 IEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI 422 (1165)
Q Consensus 343 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~I 422 (1165)
.+ ..++|
T Consensus 101 -----------------------------------------------------------------------~~--~~P~i 107 (256)
T d1lv7a_ 101 -----------------------------------------------------------------------KK--AAPCI 107 (256)
T ss_dssp -----------------------------------------------------------------------HT--TCSEE
T ss_pred -----------------------------------------------------------------------HH--cCCEE
Confidence 11 15789
Q ss_pred EEEecchhhhccCCCCC-CCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhh--CCCCe
Q psy2392 423 IFLDEIDKITTRSSQNN-NTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPI 499 (1165)
Q Consensus 423 ifiDEidki~~~~~~~~-~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~--~R~~~ 499 (1165)
|||||||+++..+.+.. +.......+...||..+|+.. ..+++++|||+ +.|+.+.|+|+ |||+.
T Consensus 108 l~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~--------~~~~v~vIatT----n~~~~ld~al~R~gRfd~ 175 (256)
T d1lv7a_ 108 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFE--------GNEGIIVIAAT----NRPDVLDPALLRPGRFDR 175 (256)
T ss_dssp EEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCC--------SSSCEEEEEEE----SCTTTSCGGGGSTTSSCE
T ss_pred EEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCC--------CCCCEEEEEeC----CCcccCCHhHcCCCCCCE
Confidence 99999999998765433 222333446667888888642 35678999884 68999999998 59999
Q ss_pred eEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHH
Q psy2392 500 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 574 (1165)
Q Consensus 500 ~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l 574 (1165)
.|.|.+++.++..+|++ .. +. +..+. .+..+..|++.+ +++-++-|.+++....
T Consensus 176 ~i~i~~P~~~~R~~il~----~~-------l~--~~~~~-~~~~~~~la~~t-------~G~s~adi~~l~~~A~ 229 (256)
T d1lv7a_ 176 QVVVGLPDVRGREQILK----VH-------MR--RVPLA-PDIDAAIIARGT-------PGFSGADLANLVNEAA 229 (256)
T ss_dssp EEECCCCCHHHHHHHHH----HH-------HT--TSCBC-TTCCHHHHHHTC-------TTCCHHHHHHHHHHHH
T ss_pred EEECCCcCHHHHHHHHH----Hh-------cc--CCCcC-cccCHHHHHHhC-------CCCCHHHHHHHHHHHH
Confidence 99999999999999994 11 22 23333 233456666644 3456677888876653
No 16
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.83 E-value=6.7e-21 Score=206.66 Aligned_cols=215 Identities=25% Similarity=0.406 Sum_probs=149.2
Q ss_pred ccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccccccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR 262 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~GyvG~ 262 (1165)
++|+|++.+|+.|.+.+.. +++.......+.. .|.++||+||||||||++|+++|++++.+++.++++.+.+. |+|.
T Consensus 9 ~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~~-~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~-~~g~ 85 (247)
T d1ixza_ 9 KDVAGAEEAKEELKEIVEF-LKNPSRFHEMGAR-IPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM-FVGV 85 (247)
T ss_dssp GGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTCC-CCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS-CTTH
T ss_pred HHHccHHHHHHHHHHHHHH-HHCHHHHHHcCCC-CCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc-cccH
Confidence 4899999999998876542 2222221111111 25799999999999999999999999999999999999875 8987
Q ss_pred chhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcE
Q psy2392 263 DVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKE 342 (1165)
Q Consensus 263 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 342 (1165)
. +..++.+|..+
T Consensus 86 ~-~~~l~~~f~~a------------------------------------------------------------------- 97 (247)
T d1ixza_ 86 G-AARVRDLFETA------------------------------------------------------------------- 97 (247)
T ss_dssp H-HHHHHHHHHHH-------------------------------------------------------------------
T ss_pred H-HHHHHHHHHHH-------------------------------------------------------------------
Confidence 6 34466666552
Q ss_pred EEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceE
Q psy2392 343 IEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI 422 (1165)
Q Consensus 343 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~I 422 (1165)
.. ..++|
T Consensus 98 -----------------------------------------------------------------------~~--~~p~I 104 (247)
T d1ixza_ 98 -----------------------------------------------------------------------KR--HAPCI 104 (247)
T ss_dssp -----------------------------------------------------------------------TT--SSSEE
T ss_pred -----------------------------------------------------------------------HH--cCCEE
Confidence 00 14789
Q ss_pred EEEecchhhhccCCCCC-CCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhh--CCCCe
Q psy2392 423 IFLDEIDKITTRSSQNN-NTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPI 499 (1165)
Q Consensus 423 ifiDEidki~~~~~~~~-~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~--~R~~~ 499 (1165)
|||||||.++.++.... +.+.....+...||..+|+-. ..++++||+|+ +.|+.+.|+|+ |||+.
T Consensus 105 i~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~--------~~~~vivi~tT----n~~~~ld~al~R~~Rf~~ 172 (247)
T d1ixza_ 105 VFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE--------KDTAIVVMAAT----NRPDILDPALLRPGRFDR 172 (247)
T ss_dssp EEEETHHHHHC---------CHHHHHHHHHHHHHHHTCC--------TTCCEEEEEEE----SCGGGSCGGGGSTTSSCE
T ss_pred EEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCC--------CCCCEEEEEeC----CCccccCHhHcCCCCCcE
Confidence 99999999998765422 233344567778998888632 34678888874 67899999997 69999
Q ss_pred eEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHH
Q psy2392 500 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 574 (1165)
Q Consensus 500 ~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l 574 (1165)
.++|++++.++..+|++ .+ +..... . .+..++.|++.+ +++-++-|.+++....
T Consensus 173 ~i~~~~P~~~eR~~il~----~~-------l~~~~~--~-~~~~~~~la~~t-------~g~s~~di~~lv~~A~ 226 (247)
T d1ixza_ 173 QIAIDAPDVKGREQILR----IH-------ARGKPL--A-EDVDLALLAKRT-------PGFVGADLENLLNEAA 226 (247)
T ss_dssp EEECCSCCHHHHHHHHH----HH-------HTTSCB--C-TTCCHHHHHHTC-------TTCCHHHHHHHHHHHH
T ss_pred EEEECCcCHHHHHHHHH----HH-------hcccCC--c-cccCHHHHHHHC-------CCCCHHHHHHHHHHHH
Confidence 99999999999999994 22 222121 1 222356676654 3445567888776654
No 17
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.82 E-value=1.1e-19 Score=197.94 Aligned_cols=179 Identities=29% Similarity=0.448 Sum_probs=137.0
Q ss_pred hhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccccccc
Q psy2392 780 DKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVG 859 (1165)
Q Consensus 780 ~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~GyvG 859 (1165)
|++|+|++.+++.|.+.+.. ++......... ...|+++||+||||||||++|+++|++++.+++.++++++.++ |+|
T Consensus 11 ~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g-~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~-~~g 87 (256)
T d1lv7a_ 11 FADVAGCDEAKEEVAELVEY-LREPSRFQKLG-GKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM-FVG 87 (256)
T ss_dssp GGGSCSCHHHHHHTHHHHHH-HHCGGGC------CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTS-CCC
T ss_pred HHHHhchHHHHHHHHHHHHH-HHCHHHHHHcC-CCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhc-chh
Confidence 58999999999999887753 33322222111 1236899999999999999999999999999999999999987 999
Q ss_pred cChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCCCCe
Q psy2392 860 RDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNK 939 (1165)
Q Consensus 860 ~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~ld~r 939 (1165)
..+ ..++++|+.|..+
T Consensus 88 ~~~-~~l~~~f~~A~~~--------------------------------------------------------------- 103 (256)
T d1lv7a_ 88 VGA-SRVRDMFEQAKKA--------------------------------------------------------------- 103 (256)
T ss_dssp CCH-HHHHHHHHHHHTT---------------------------------------------------------------
T ss_pred HHH-HHHHHHHHHHHHc---------------------------------------------------------------
Confidence 884 4577777665111
Q ss_pred EEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhhcCC
Q psy2392 940 EIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNG 1019 (1165)
Q Consensus 940 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~~~g 1019 (1165)
+++
T Consensus 104 -----------------------------------------------------------------------------~P~ 106 (256)
T d1lv7a_ 104 -----------------------------------------------------------------------------APC 106 (256)
T ss_dssp -----------------------------------------------------------------------------CSE
T ss_pred -----------------------------------------------------------------------------CCE
Confidence 567
Q ss_pred eeeehhhhhhhccCCCC-CCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhh--ccCC
Q psy2392 1020 IIFLDEIDKITTRSSQN-NNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFP 1096 (1165)
Q Consensus 1020 IvfiDEiDki~~~~~~~-~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~--gR~~ 1096 (1165)
|+||||||+|+..+++. .+.......+...||..+++. -..+++++||+. +.|+.+.|+|. |||.
T Consensus 107 il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~--------~~~~~v~vIatT----n~~~~ld~al~R~gRfd 174 (256)
T d1lv7a_ 107 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF--------EGNEGIIVIAAT----NRPDVLDPALLRPGRFD 174 (256)
T ss_dssp EEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTC--------CSSSCEEEEEEE----SCTTTSCGGGGSTTSSC
T ss_pred EEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCC--------CCCCCEEEEEeC----CCcccCCHhHcCCCCCC
Confidence 99999999999875432 222223334556788888753 245678999885 58999999998 5999
Q ss_pred eEEEcCCCCHHHHHHHHh
Q psy2392 1097 IRVELDSLSISDFTRIMT 1114 (1165)
Q Consensus 1097 i~v~l~~l~~~~l~~il~ 1114 (1165)
-.++|++++.++..+|++
T Consensus 175 ~~i~i~~P~~~~R~~il~ 192 (256)
T d1lv7a_ 175 RQVVVGLPDVRGREQILK 192 (256)
T ss_dssp EEEECCCCCHHHHHHHHH
T ss_pred EEEECCCcCHHHHHHHHH
Confidence 999999999999999998
No 18
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.81 E-value=4.4e-20 Score=200.21 Aligned_cols=174 Identities=29% Similarity=0.509 Sum_probs=132.8
Q ss_pred hhcccchHHHHHHHHHHHHh-----HhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCccc
Q psy2392 780 DKYVIGQNRAKRAVAIALRN-----RWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 854 (1165)
Q Consensus 780 ~~~IvGQ~~ak~~l~~~i~~-----~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~ 854 (1165)
+++|+|++++++.|.+.+.. .|.+.|.. .+.++||+||||||||++|+++|++++.+++.++++.+.+
T Consensus 8 ~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~-------~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 8 FKDVAGAEEAKEELKEIVEFLKNPSRFHEMGAR-------IPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCC-------CCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred HHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCC-------CCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhh
Confidence 47899999999999876642 12222221 2589999999999999999999999999999999999988
Q ss_pred ccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccC
Q psy2392 855 VGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREG 934 (1165)
Q Consensus 855 ~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g 934 (1165)
+ |+|+.. ..++++|..|..+
T Consensus 81 ~-~~g~~~-~~l~~~f~~a~~~---------------------------------------------------------- 100 (247)
T d1ixza_ 81 M-FVGVGA-ARVRDLFETAKRH---------------------------------------------------------- 100 (247)
T ss_dssp S-CTTHHH-HHHHHHHHHHTTS----------------------------------------------------------
T ss_pred c-cccHHH-HHHHHHHHHHHHc----------------------------------------------------------
Confidence 7 999763 4577776655111
Q ss_pred CCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHh
Q psy2392 935 ALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN 1014 (1165)
Q Consensus 935 ~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~ 1014 (1165)
T Consensus 101 -------------------------------------------------------------------------------- 100 (247)
T d1ixza_ 101 -------------------------------------------------------------------------------- 100 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCeeeehhhhhhhccCCCC-CCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhh-
Q psy2392 1015 VEQNGIIFLDEIDKITTRSSQN-NNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ- 1092 (1165)
Q Consensus 1015 ~~~~gIvfiDEiDki~~~~~~~-~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~- 1092 (1165)
+++||||||||+|+..+... .+.+.....+...||..|++. ...++++||++. +.|+.+.|.|+
T Consensus 101 --~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~--------~~~~~vivi~tT----n~~~~ld~al~R 166 (247)
T d1ixza_ 101 --APCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF--------EKDTAIVVMAAT----NRPDILDPALLR 166 (247)
T ss_dssp --SSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTC--------CTTCCEEEEEEE----SCGGGSCGGGGS
T ss_pred --CCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCC--------CCCCCEEEEEeC----CCccccCHhHcC
Confidence 56799999999999875432 223334455777888888863 234678888875 57999999997
Q ss_pred -ccCCeEEEcCCCCHHHHHHHHh
Q psy2392 1093 -GRFPIRVELDSLSISDFTRIMT 1114 (1165)
Q Consensus 1093 -gR~~i~v~l~~l~~~~l~~il~ 1114 (1165)
|||...++|++++.++..+|++
T Consensus 167 ~~Rf~~~i~~~~P~~~eR~~il~ 189 (247)
T d1ixza_ 167 PGRFDRQIAIDAPDVKGREQILR 189 (247)
T ss_dssp TTSSCEEEECCSCCHHHHHHHHH
T ss_pred CCCCcEEEEECCcCHHHHHHHHH
Confidence 6999999999999999999998
No 19
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.78 E-value=1.2e-18 Score=186.38 Aligned_cols=139 Identities=17% Similarity=0.282 Sum_probs=97.8
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeee--------ceeecCceEEEEEeCCcccCCCCCCc
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK--------YGIIKTDHILFIASGAFHLAKPSDLI 490 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~--------~~~~~t~~ilfI~~gaf~~~~p~~l~ 490 (1165)
..+++||||+|++.+. +|..+++.+|...+... .......+++||+++ +.+..+.
T Consensus 86 ~~~~~~ide~~~~~~~-------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at----~~~~~~~ 148 (238)
T d1in4a2 86 RGDVLFIDEIHRLNKA-------------VEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGAT----TRSGLLS 148 (238)
T ss_dssp TTCEEEEETGGGCCHH-------------HHHHHHHHHHTSCCCC---------------CCCEEEEEE----SCGGGSC
T ss_pred cCCchHHHHHHHhhhH-------------HHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEec----CCCcccc
Confidence 4679999999999765 56677777776544321 123345678888885 4566789
Q ss_pred hhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHH
Q psy2392 491 PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570 (1165)
Q Consensus 491 pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~i 570 (1165)
|.+++||...+.|++++.+++..++. .....+++ .+++++++.+++.+ ++.+|.+.+++
T Consensus 149 ~~~~~r~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~--~~~~~~l~~i~~~s--------~gd~R~ai~~l 207 (238)
T d1in4a2 149 SPLRSRFGIILELDFYTVKELKEIIK-----------RAASLMDV--EIEDAAAEMIAKRS--------RGTPRIAIRLT 207 (238)
T ss_dssp HHHHTTCSEEEECCCCCHHHHHHHHH-----------HHHHHTTC--CBCHHHHHHHHHTS--------TTCHHHHHHHH
T ss_pred ccceeeeeEEEEecCCCHHHHHHHHH-----------Hhhhhccc--hhhHHHHHHHHHhC--------CCCHHHHHHHH
Confidence 99999999999999999999999884 12334444 68899999998766 57899999999
Q ss_pred HHHHHHhhcccCCCeeEEcccccccccc
Q psy2392 571 EKLLEEVSFNSNNISLLVDADYVNSRLG 598 (1165)
Q Consensus 571 e~~l~~~~~~~~~~~~~i~~~~v~~~~~ 598 (1165)
+++.+.......+ .||.+.+.+.+.
T Consensus 208 ~~~~~~~~~~~~~---~it~~~~~~al~ 232 (238)
T d1in4a2 208 KRVRDMLTVVKAD---RINTDIVLKTME 232 (238)
T ss_dssp HHHHHHHHHHTCS---SBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCC---ccCHHHHHHHHH
Confidence 8876544333222 266666665543
No 20
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.5e-18 Score=189.15 Aligned_cols=213 Identities=21% Similarity=0.355 Sum_probs=149.9
Q ss_pred ccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccccccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR 262 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~GyvG~ 262 (1165)
++|+|++++|+.|.+.+..+.+++.+....+.. .|.++||+||||||||++++++|.+++.+++.++++.+.+. |+|.
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~-~~g~ 81 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK-LAGE 81 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTS-CTTH
T ss_pred hhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCC-CCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccc-cccc
Confidence 579999999999999887655555443332222 35799999999999999999999999999999999998765 7776
Q ss_pred chhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcE
Q psy2392 263 DVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKE 342 (1165)
Q Consensus 263 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 342 (1165)
. ...++.+|..+
T Consensus 82 ~-~~~l~~~f~~A------------------------------------------------------------------- 93 (258)
T d1e32a2 82 S-ESNLRKAFEEA------------------------------------------------------------------- 93 (258)
T ss_dssp H-HHHHHHHHHHH-------------------------------------------------------------------
T ss_pred H-HHHHHHHHHHH-------------------------------------------------------------------
Confidence 6 33455555442
Q ss_pred EEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceE
Q psy2392 343 IEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI 422 (1165)
Q Consensus 343 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~I 422 (1165)
.. ..++|
T Consensus 94 -----------------------------------------------------------------------~~--~~p~i 100 (258)
T d1e32a2 94 -----------------------------------------------------------------------EK--NAPAI 100 (258)
T ss_dssp -----------------------------------------------------------------------HH--TCSEE
T ss_pred -----------------------------------------------------------------------Hh--cCCeE
Confidence 11 15889
Q ss_pred EEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhC--CCCee
Q psy2392 423 IFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQG--RFPIR 500 (1165)
Q Consensus 423 ifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~--R~~~~ 500 (1165)
|||||+|.+..++....+ + ....+...++..+++. ....++++|+|. +.|..+.|+|++ ||+..
T Consensus 101 l~iDeid~l~~~r~~~~~-~-~~~~~~~~~~~~~~~~--------~~~~~vlvi~tT----n~~~~ld~al~r~gRfd~~ 166 (258)
T d1e32a2 101 IFIDELDAIAPKREKTHG-E-VERRIVSQLLTLMDGL--------KQRAHVIVMAAT----NRPNSIDPALRRFGRFDRE 166 (258)
T ss_dssp EEESSGGGTCCHHHHCCC-T-THHHHHHHHHHHHHTC--------CCSSCEEEEEEE----SCGGGSCGGGTSTTSSCEE
T ss_pred EEehhhhhhccCCCCCCC-c-hHHHHHHHhccccccc--------cccCCccEEEeC----CCccccchhhhhcccccce
Confidence 999999999987543221 1 1223444566555542 245678899884 688999999985 99999
Q ss_pred EecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHH
Q psy2392 501 VELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKL 573 (1165)
Q Consensus 501 v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~ 573 (1165)
|+|+.++.++..+|++ .+ +. +..+. ++..++.|++.+. ++-++-|.+++...
T Consensus 167 i~~~~P~~~~R~~il~----~~-------l~--~~~~~-~~~~~~~la~~t~-------G~s~adl~~lv~~A 218 (258)
T d1e32a2 167 VDIGIPDATGRLEILQ----IH-------TK--NMKLA-DDVDLEQVANETH-------GHVGADLAALCSEA 218 (258)
T ss_dssp EECCCCCHHHHHHHHH----HT-------TT--TSCBC-TTCCHHHHHHHCT-------TCCHHHHHHHHHHH
T ss_pred eECCCCCHHHHHHHhh----hh-------cc--Ccccc-cccchhhhhhccc-------CCCHHHHHHHHHHH
Confidence 9999999999999994 11 21 22222 2223677777663 34455677766543
No 21
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.3e-18 Score=189.71 Aligned_cols=178 Identities=24% Similarity=0.414 Sum_probs=133.2
Q ss_pred hhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccccccc
Q psy2392 780 DKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVG 859 (1165)
Q Consensus 780 ~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~GyvG 859 (1165)
+++|+|++.+|+.|.+.+..+++.......... ..|+++||+||||||||++++++|+.++.+|+.++++.+.+. |+|
T Consensus 3 ~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~-~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~-~~g 80 (258)
T d1e32a2 3 YDDVGGCRKQLAQIKEMVELPLRHPALFKAIGV-KPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK-LAG 80 (258)
T ss_dssp GGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCC-CCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTS-CTT
T ss_pred hhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCC-CCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccc-ccc
Confidence 478999999999999988754443322221111 126899999999999999999999999999999999998877 888
Q ss_pred cChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCCCCe
Q psy2392 860 RDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNK 939 (1165)
Q Consensus 860 ~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~ld~r 939 (1165)
... ..++.+|..|..+
T Consensus 81 ~~~-~~l~~~f~~A~~~--------------------------------------------------------------- 96 (258)
T d1e32a2 81 ESE-SNLRKAFEEAEKN--------------------------------------------------------------- 96 (258)
T ss_dssp HHH-HHHHHHHHHHHHT---------------------------------------------------------------
T ss_pred cHH-HHHHHHHHHHHhc---------------------------------------------------------------
Confidence 763 4466666555111
Q ss_pred EEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhhcCC
Q psy2392 940 EIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNG 1019 (1165)
Q Consensus 940 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~~~g 1019 (1165)
+++
T Consensus 97 -----------------------------------------------------------------------------~p~ 99 (258)
T d1e32a2 97 -----------------------------------------------------------------------------APA 99 (258)
T ss_dssp -----------------------------------------------------------------------------CSE
T ss_pred -----------------------------------------------------------------------------CCe
Confidence 578
Q ss_pred eeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhc--cCCe
Q psy2392 1020 IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQG--RFPI 1097 (1165)
Q Consensus 1020 IvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~g--R~~i 1097 (1165)
|+||||||.++.+.++..+ +. ..-+...++..+++ ....+++++||+. +.|+.+.|+|++ ||..
T Consensus 100 il~iDeid~l~~~r~~~~~-~~-~~~~~~~~~~~~~~--------~~~~~~vlvi~tT----n~~~~ld~al~r~gRfd~ 165 (258)
T d1e32a2 100 IIFIDELDAIAPKREKTHG-EV-ERRIVSQLLTLMDG--------LKQRAHVIVMAAT----NRPNSIDPALRRFGRFDR 165 (258)
T ss_dssp EEEESSGGGTCCHHHHCCC-TT-HHHHHHHHHHHHHT--------CCCSSCEEEEEEE----SCGGGSCGGGTSTTSSCE
T ss_pred EEEehhhhhhccCCCCCCC-ch-HHHHHHHhcccccc--------ccccCCccEEEeC----CCccccchhhhhcccccc
Confidence 9999999999987543211 11 11234445554443 3455678999885 589999999986 9999
Q ss_pred EEEcCCCCHHHHHHHHh
Q psy2392 1098 RVELDSLSISDFTRIMT 1114 (1165)
Q Consensus 1098 ~v~l~~l~~~~l~~il~ 1114 (1165)
.++|+.++.++..+||+
T Consensus 166 ~i~~~~P~~~~R~~il~ 182 (258)
T d1e32a2 166 EVDIGIPDATGRLEILQ 182 (258)
T ss_dssp EEECCCCCHHHHHHHHH
T ss_pred eeECCCCCHHHHHHHhh
Confidence 99999999999999997
No 22
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.74 E-value=1.9e-18 Score=184.64 Aligned_cols=187 Identities=20% Similarity=0.335 Sum_probs=138.6
Q ss_pred hHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEec
Q psy2392 770 LVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 849 (1165)
Q Consensus 770 ~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~ 849 (1165)
+||+.+ ++|+||+++++.|..++.....+- ..++++||+||||||||++|+++|++++.+++.+++
T Consensus 3 ~RP~~~-----~divGqe~~~~~l~~~i~~~~~~~---------~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~ 68 (238)
T d1in4a2 3 LRPKSL-----DEFIGQENVKKKLSLALEAAKMRG---------EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSG 68 (238)
T ss_dssp TSCSSG-----GGCCSCHHHHHHHHHHHHHHHHHT---------CCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEET
T ss_pred CCCCcH-----HHcCChHHHHHHHHHHHHHHHhcC---------CCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccC
Confidence 455554 789999999999999987542221 114689999999999999999999999999999888
Q ss_pred CCcccccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHH
Q psy2392 850 TKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRK 929 (1165)
Q Consensus 850 se~~~~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~ 929 (1165)
++...+ + .+...+
T Consensus 69 ~~~~~~-------~-~~~~~~----------------------------------------------------------- 81 (238)
T d1in4a2 69 PVLVKQ-------G-DMAAIL----------------------------------------------------------- 81 (238)
T ss_dssp TTCCSH-------H-HHHHHH-----------------------------------------------------------
T ss_pred cccccH-------H-HHHHHH-----------------------------------------------------------
Confidence 765322 1 111110
Q ss_pred hhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHH
Q psy2392 930 RLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQ 1009 (1165)
Q Consensus 930 ~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~ 1009 (1165)
T Consensus 82 -------------------------------------------------------------------------------- 81 (238)
T d1in4a2 82 -------------------------------------------------------------------------------- 81 (238)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceee--------eeeccCceEEEEecCCCCC
Q psy2392 1010 KAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK--------YGIIKTDHILFIASGAFHL 1081 (1165)
Q Consensus 1010 ~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k--------~~~~~t~~ilfI~~gaf~~ 1081 (1165)
......+++||||+|++.+. +|..|++.+|...+... .......++.||+++.
T Consensus 82 ---~~~~~~~~~~ide~~~~~~~-------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~--- 142 (238)
T d1in4a2 82 ---TSLERGDVLFIDEIHRLNKA-------------VEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATT--- 142 (238)
T ss_dssp ---HHCCTTCEEEEETGGGCCHH-------------HHHHHHHHHHTSCCCC---------------CCCEEEEEES---
T ss_pred ---HhhccCCchHHHHHHHhhhH-------------HHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecC---
Confidence 01124579999999999765 78888888887655432 2234566888999865
Q ss_pred CCCCCCchhhhccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1082 AKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1082 ~~p~dl~pel~gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
.+..+.|.+++||...+.|++++.+++..+++ .....+++ .+++++++.|++.+.
T Consensus 143 -~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~--~~~~~~l~~i~~~s~ 197 (238)
T d1in4a2 143 -RSGLLSSPLRSRFGIILELDFYTVKELKEIIK-----------RAASLMDV--EIEDAAAEMIAKRSR 197 (238)
T ss_dssp -CGGGSCHHHHTTCSEEEECCCCCHHHHHHHHH-----------HHHHHTTC--CBCHHHHHHHHHTST
T ss_pred -CCccccccceeeeeEEEEecCCCHHHHHHHHH-----------Hhhhhccc--hhhHHHHHHHHHhCC
Confidence 66778899999999989999999999999988 34556666 688999999987764
No 23
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.74 E-value=7.3e-18 Score=180.33 Aligned_cols=139 Identities=13% Similarity=0.215 Sum_probs=97.1
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeee--------ceeecCceEEEEEeCCcccCCCCCCc
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK--------YGIIKTDHILFIASGAFHLAKPSDLI 490 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~--------~~~~~t~~ilfI~~gaf~~~~p~~l~ 490 (1165)
+.+|+||||+|++.+. .|..+++.+|...+... .......++.||++. +++....
T Consensus 87 ~~~i~~iDe~~~~~~~-------------~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~ 149 (239)
T d1ixsb2 87 EGDILFIDEIHRLSRQ-------------AEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGAT----TRPGLIT 149 (239)
T ss_dssp TTCEEEEETGGGCCHH-------------HHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEE----SCCSSCS
T ss_pred CCCeeeeecccccchh-------------HHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeec----cCccccc
Confidence 4579999999999766 55577777775443321 112334455666653 5677777
Q ss_pred hhhhCCCCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHH
Q psy2392 491 PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570 (1165)
Q Consensus 491 pel~~R~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~i 570 (1165)
+..+.|+...+.|.+++.+++.+|+. ..+..+++ .+++++++.|++.+ ++.+|.+.+++
T Consensus 150 ~~~l~~~~~~~~~~~~~~~~~~~i~~-----------~~~~~~~i--~~~~~~l~~ia~~s--------~gd~R~a~~~l 208 (239)
T d1ixsb2 150 APLLSRFGIVEHLEYYTPEELAQGVM-----------RDARLLGV--RITEEAALEIGRRS--------RGTMRVAKRLF 208 (239)
T ss_dssp CGGGGGCSEEEECCCCCHHHHHHHHH-----------HHHGGGCC--CBCHHHHHHHHHHT--------TSSHHHHHHHH
T ss_pred chhhcccceeeEeeccChhhhhHHHH-----------HHHHHhCC--ccchHHHHHHHHHc--------CCCHHHHHHHH
Confidence 88888888899999999999999883 23344454 77899999999988 56789999999
Q ss_pred HHHHHHhhcccCCCeeEEcccccccccc
Q psy2392 571 EKLLEEVSFNSNNISLLVDADYVNSRLG 598 (1165)
Q Consensus 571 e~~l~~~~~~~~~~~~~i~~~~v~~~~~ 598 (1165)
+.+....... ..-.||.+.+.+.+.
T Consensus 209 ~~~~~~a~~~---~~~~It~~~~~~~l~ 233 (239)
T d1ixsb2 209 RRVRDFAQVA---GEEVITRERALEALA 233 (239)
T ss_dssp HHHHHHHTTS---CCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCCcCHHHHHHHHh
Confidence 8875433211 113477777776654
No 24
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=4.7e-18 Score=185.89 Aligned_cols=216 Identities=18% Similarity=0.298 Sum_probs=145.9
Q ss_pred ccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccccccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR 262 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~GyvG~ 262 (1165)
++|+|.+++++.|.+.+..+.++.......+. ..++++||+||||||||++|+++|..++.+|+.++++++.+. |.|.
T Consensus 7 ~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~-~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~-~~~~ 84 (265)
T d1r7ra3 7 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGM-TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM-WFGE 84 (265)
T ss_dssp SSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCC-CCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTS-CTTT
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCC-CCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhc-cccc
Confidence 47999999999999988655433322111111 125799999999999999999999999999999999988763 7775
Q ss_pred chhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcE
Q psy2392 263 DVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKE 342 (1165)
Q Consensus 263 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 342 (1165)
. +..++.+|..+
T Consensus 85 ~-~~~l~~~f~~A------------------------------------------------------------------- 96 (265)
T d1r7ra3 85 S-EANVREIFDKA------------------------------------------------------------------- 96 (265)
T ss_dssp H-HHHHHHHHHHH-------------------------------------------------------------------
T ss_pred h-HHHHHHHHHHH-------------------------------------------------------------------
Confidence 5 34455555442
Q ss_pred EEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceE
Q psy2392 343 IEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI 422 (1165)
Q Consensus 343 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~I 422 (1165)
.. ..++|
T Consensus 97 -----------------------------------------------------------------------~~--~~p~i 103 (265)
T d1r7ra3 97 -----------------------------------------------------------------------RQ--AAPCV 103 (265)
T ss_dssp -----------------------------------------------------------------------HH--TCSEE
T ss_pred -----------------------------------------------------------------------Hh--cCCcc
Confidence 11 14799
Q ss_pred EEEecchhhhccCCCCCC-CccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhh--CCCCe
Q psy2392 423 IFLDEIDKITTRSSQNNN-TDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPI 499 (1165)
Q Consensus 423 ifiDEidki~~~~~~~~~-~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~--~R~~~ 499 (1165)
|||||||.+...+....+ .....+.+.+.||..+++. ..+.+++||+|. +.|+.+.|+|+ |||+.
T Consensus 104 l~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~--------~~~~~v~vi~tt----n~~~~ld~al~r~gRf~~ 171 (265)
T d1r7ra3 104 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--------STKKNVFIIGAT----NRPDIIDPAILRPGRLDQ 171 (265)
T ss_dssp EEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------------CCEEEECC----BSCTTTSCGGGSSTTSEE
T ss_pred eeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCc--------CCCCCEEEEEeC----CCchhCCHHHhCCCCccE
Confidence 999999999987543221 1112233456788888753 234568888884 68999999997 59999
Q ss_pred eEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHH
Q psy2392 500 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 574 (1165)
Q Consensus 500 ~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l 574 (1165)
.|+|.+++.++..+||+ .+++ +..+. .+..++.|++.+. ++-++-|..++.+..
T Consensus 172 ~i~~~~p~~~~R~~il~----~~l~---------~~~~~-~~~~l~~la~~t~-------g~s~~di~~lv~~A~ 225 (265)
T d1r7ra3 172 LIYIPLPDEKSRVAILK----ANLR---------KSPVA-KDVDLEFLAKMTN-------GFSGADLTEICQRAC 225 (265)
T ss_dssp EEECCCCCCHHHHHHHH----HHTT---------CC-----CCCCHHHHHHHC-------SSCCHHHHHHHHHHH
T ss_pred EEEecchHHHHHHHHHH----HHhc---------cCCch-hhhhHHHHHhcCC-------CCCHHHHHHHHHHHH
Confidence 99999999999999994 1111 11111 1113567777763 455666777766554
No 25
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.71 E-value=2.4e-17 Score=176.30 Aligned_cols=183 Identities=19% Similarity=0.318 Sum_probs=135.1
Q ss_pred hcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCccccccccc
Q psy2392 781 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR 860 (1165)
Q Consensus 781 ~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~GyvG~ 860 (1165)
++|+||+++++.+..++.....+ ...++++||+||||||||++|+++|+.++.++..++++.....
T Consensus 9 ddivGq~~~~~~L~~~i~~~~~~---------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~----- 74 (239)
T d1ixsb2 9 DEYIGQERLKQKLRVYLEAAKAR---------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP----- 74 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHHHTTS---------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH-----
T ss_pred HHhCCHHHHHHHHHHHHHHHHhc---------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc-----
Confidence 78999999999999998754111 1125799999999999999999999999999999998775322
Q ss_pred ChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCCCCeE
Q psy2392 861 DVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKE 940 (1165)
Q Consensus 861 ~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~ld~r~ 940 (1165)
......+
T Consensus 75 ---~~~~~~~---------------------------------------------------------------------- 81 (239)
T d1ixsb2 75 ---GDLAAIL---------------------------------------------------------------------- 81 (239)
T ss_dssp ---HHHHHHH----------------------------------------------------------------------
T ss_pred ---hhhHHHH----------------------------------------------------------------------
Confidence 1010000
Q ss_pred EEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhhcCCe
Q psy2392 941 IEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI 1020 (1165)
Q Consensus 941 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~~~gI 1020 (1165)
.....+..|
T Consensus 82 -----------------------------------------------------------------------~~~~~~~~i 90 (239)
T d1ixsb2 82 -----------------------------------------------------------------------ANSLEEGDI 90 (239)
T ss_dssp -----------------------------------------------------------------------HTTCCTTCE
T ss_pred -----------------------------------------------------------------------HhhccCCCe
Confidence 000114569
Q ss_pred eeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceee--------eeeccCceEEEEecCCCCCCCCCCCchhhh
Q psy2392 1021 IFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK--------YGIIKTDHILFIASGAFHLAKPSDLIPELQ 1092 (1165)
Q Consensus 1021 vfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k--------~~~~~t~~ilfI~~gaf~~~~p~dl~pel~ 1092 (1165)
+||||+|++... +|..+++.+|...+... .......++.||++. ++|....+..+
T Consensus 91 ~~iDe~~~~~~~-------------~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~l 153 (239)
T d1ixsb2 91 LFIDEIHRLSRQ-------------AEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGAT----TRPGLITAPLL 153 (239)
T ss_dssp EEEETGGGCCHH-------------HHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEE----SCCSSCSCGGG
T ss_pred eeeecccccchh-------------HHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeec----cCcccccchhh
Confidence 999999999775 77888888886544321 123334455676663 47777888888
Q ss_pred ccCCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhc
Q psy2392 1093 GRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYC 1151 (1165)
Q Consensus 1093 gR~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~ 1151 (1165)
.|+...+.|.+++.+++.+|+. ..+..+++ .+++++++.||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~-----------~~~~~~~i--~~~~~~l~~ia~~s~g 199 (239)
T d1ixsb2 154 SRFGIVEHLEYYTPEELAQGVM-----------RDARLLGV--RITEEAALEIGRRSRG 199 (239)
T ss_dssp GGCSEEEECCCCCHHHHHHHHH-----------HHHGGGCC--CBCHHHHHHHHHHTTS
T ss_pred cccceeeEeeccChhhhhHHHH-----------HHHHHhCC--ccchHHHHHHHHHcCC
Confidence 8888889999999999999988 45666777 7789999999988754
No 26
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.70 E-value=8.2e-17 Score=174.08 Aligned_cols=216 Identities=19% Similarity=0.246 Sum_probs=138.6
Q ss_pred HHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccccccc
Q psy2392 178 VSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 257 (1165)
Q Consensus 178 ~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~ 257 (1165)
.+++.+.|+|+.+.+..+.+-......... .....| +.++||+||||||||++|+++|+.++.+|+.+++++...
T Consensus 4 ~~~~~~~~i~~~~~i~~i~~~~~~~~~~~~-~~~~~p---~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~- 78 (246)
T d1d2na_ 4 ASYIMNGIIKWGDPVTRVLDDGELLVQQTK-NSDRTP---LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMI- 78 (246)
T ss_dssp TTTCTTCCCCCSHHHHHHHHHHHHHHHHHH-HCSSCS---EEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCT-
T ss_pred HHhhccCCcCcCHHHHHHHHHHHHHHHHHh-ccCCCC---CeEEEEECcCCCCHHHHHHHHhhcccccccccccccccc-
Confidence 456778899988877766665543321211 112222 489999999999999999999999999999999987643
Q ss_pred cccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHHHHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCC
Q psy2392 258 GYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGA 337 (1165)
Q Consensus 258 GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (1165)
||.+......++.+|+.+
T Consensus 79 g~~~~~~~~~i~~if~~A-------------------------------------------------------------- 96 (246)
T d1d2na_ 79 GFSETAKCQAMKKIFDDA-------------------------------------------------------------- 96 (246)
T ss_dssp TCCHHHHHHHHHHHHHHH--------------------------------------------------------------
T ss_pred cccccchhhhhhhhhhhh--------------------------------------------------------------
Confidence 455554444455555442
Q ss_pred CCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhcCCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhh
Q psy2392 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNV 417 (1165)
Q Consensus 338 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 417 (1165)
..
T Consensus 97 ----------------------------------------------------------------------------~~-- 98 (246)
T d1d2na_ 97 ----------------------------------------------------------------------------YK-- 98 (246)
T ss_dssp ----------------------------------------------------------------------------HT--
T ss_pred ----------------------------------------------------------------------------hh--
Confidence 11
Q ss_pred ccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCch-hhhCC
Q psy2392 418 EQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIP-ELQGR 496 (1165)
Q Consensus 418 ~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~p-el~~R 496 (1165)
.+++||||||||++...... +.+.+. .+.+.|+.++++.. ...+++++|+|. +.|+.+.+ .+.+|
T Consensus 99 ~~p~il~iDEid~l~~~~~~--~~~~~~-~~~~~ll~~l~~~~-------~~~~~v~vi~tT----n~~~~ld~~~~~~r 164 (246)
T d1d2na_ 99 SQLSCVVVDDIERLLDYVPI--GPRFSN-LVLQALLVLLKKAP-------PQGRKLLIIGTT----SRKDVLQEMEMLNA 164 (246)
T ss_dssp SSEEEEEECCHHHHTTCBTT--TTBCCH-HHHHHHHHHTTCCC-------STTCEEEEEEEE----SCHHHHHHTTCTTT
T ss_pred cccceeehhhhhhHhhhccc--ccchhH-HHHHHHHHHhcCCC-------ccccceeeeecc----CChhhccchhhcCc
Confidence 15789999999999876543 223333 34457888888632 245678899885 45666665 47899
Q ss_pred CCeeEecCCCC-HHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHH
Q psy2392 497 FPIRVELDSLS-ISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKL 573 (1165)
Q Consensus 497 ~~~~v~~~~L~-~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~ 573 (1165)
|+..+.|+.+. .+++.++++.. + .|++..+..+++.... ..-+.|++.+.+.++..
T Consensus 165 F~~~i~~P~~~~r~~il~~l~~~---------------~---~~~~~~~~~i~~~~~g---~~~~~~ik~ll~~ie~a 221 (246)
T d1d2na_ 165 FSTTIHVPNIATGEQLLEALELL---------------G---NFKDKERTTIAQQVKG---KKVWIGIKKLLMLIEMS 221 (246)
T ss_dssp SSEEEECCCEEEHHHHHHHHHHH---------------T---CSCHHHHHHHHHHHTT---SEEEECHHHHHHHHHHH
T ss_pred cceEEecCCchhHHHHHHHHHhc---------------c---CCChHHHHHHHHHcCC---CccchhHHHHHHHHHHH
Confidence 99999997665 33343333210 1 3556666666665532 22345666666665543
No 27
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.69 E-value=4.9e-17 Score=175.83 Aligned_cols=181 Identities=19% Similarity=0.238 Sum_probs=122.8
Q ss_pred HHhhhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCccccc
Q psy2392 777 SELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVG 856 (1165)
Q Consensus 777 ~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~G 856 (1165)
+++.+.|+|+.+.++.+............ ..... ++.++||+||||||||++|+++|+.++.+|+.+++++... |
T Consensus 5 ~~~~~~~i~~~~~i~~i~~~~~~~~~~~~-~~~~~---p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~-g 79 (246)
T d1d2na_ 5 SYIMNGIIKWGDPVTRVLDDGELLVQQTK-NSDRT---PLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMI-G 79 (246)
T ss_dssp TTCTTCCCCCSHHHHHHHHHHHHHHHHHH-HCSSC---SEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCT-T
T ss_pred HhhccCCcCcCHHHHHHHHHHHHHHHHHh-ccCCC---CCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccc-c
Confidence 45667888987766666655543222221 11111 2589999999999999999999999999999999988653 3
Q ss_pred ccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCC
Q psy2392 857 YVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGAL 936 (1165)
Q Consensus 857 yvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~l 936 (1165)
|.+......++++|+.|...
T Consensus 80 ~~~~~~~~~i~~if~~A~~~------------------------------------------------------------ 99 (246)
T d1d2na_ 80 FSETAKCQAMKKIFDDAYKS------------------------------------------------------------ 99 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHTS------------------------------------------------------------
T ss_pred ccccchhhhhhhhhhhhhhc------------------------------------------------------------
Confidence 55544344566665554111
Q ss_pred CCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhh
Q psy2392 937 DNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE 1016 (1165)
Q Consensus 937 d~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~ 1016 (1165)
T Consensus 100 -------------------------------------------------------------------------------- 99 (246)
T d1d2na_ 100 -------------------------------------------------------------------------------- 99 (246)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCch-hhhccC
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIP-ELQGRF 1095 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~p-el~gR~ 1095 (1165)
+++|+||||||++...... +++.+.. +...|+.++++. ....+++++||+.+ .|+.+.+ .+.+||
T Consensus 100 ~p~il~iDEid~l~~~~~~--~~~~~~~-~~~~ll~~l~~~-------~~~~~~v~vi~tTn----~~~~ld~~~~~~rF 165 (246)
T d1d2na_ 100 QLSCVVVDDIERLLDYVPI--GPRFSNL-VLQALLVLLKKA-------PPQGRKLLIIGTTS----RKDVLQEMEMLNAF 165 (246)
T ss_dssp SEEEEEECCHHHHTTCBTT--TTBCCHH-HHHHHHHHTTCC-------CSTTCEEEEEEEES----CHHHHHHTTCTTTS
T ss_pred ccceeehhhhhhHhhhccc--ccchhHH-HHHHHHHHhcCC-------CccccceeeeeccC----ChhhccchhhcCcc
Confidence 5689999999999876543 2233332 445678888763 23456788998864 5666654 478999
Q ss_pred CeEEEcCCCC-HHHHHHHHhhh
Q psy2392 1096 PIRVELDSLS-ISDFTRIMTST 1116 (1165)
Q Consensus 1096 ~i~v~l~~l~-~~~l~~il~~~ 1116 (1165)
...++++.+. .+++.++|..+
T Consensus 166 ~~~i~~P~~~~r~~il~~l~~~ 187 (246)
T d1d2na_ 166 STTIHVPNIATGEQLLEALELL 187 (246)
T ss_dssp SEEEECCCEEEHHHHHHHHHHH
T ss_pred ceEEecCCchhHHHHHHHHHhc
Confidence 9999997774 56677777643
No 28
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=9e-18 Score=183.67 Aligned_cols=180 Identities=19% Similarity=0.331 Sum_probs=128.8
Q ss_pred hhcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccccccc
Q psy2392 780 DKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVG 859 (1165)
Q Consensus 780 ~~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~GyvG 859 (1165)
+++|+|++++++.|.+.+..++++....... +...++++||+||||||||++|+++|..++.+|+.++++.+.+. |.|
T Consensus 6 f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~-g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~-~~~ 83 (265)
T d1r7ra3 6 WEDIGGLEDVKRELQELVQYPVEHPDKFLKF-GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM-WFG 83 (265)
T ss_dssp CSSCSSSSCCCCHHHHHTHHHHHCHHHHHHC-CCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTS-CTT
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCHHHHHhC-CCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhc-ccc
Confidence 4789999999999999886543322111100 01125899999999999999999999999999999999988776 777
Q ss_pred cChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHHHHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCCCCe
Q psy2392 860 RDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNK 939 (1165)
Q Consensus 860 ~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~ld~r 939 (1165)
.. +..++.+|..|..
T Consensus 84 ~~-~~~l~~~f~~A~~---------------------------------------------------------------- 98 (265)
T d1r7ra3 84 ES-EANVREIFDKARQ---------------------------------------------------------------- 98 (265)
T ss_dssp TH-HHHHHHHHHHHHH----------------------------------------------------------------
T ss_pred ch-HHHHHHHHHHHHh----------------------------------------------------------------
Confidence 65 3446666655411
Q ss_pred EEEEEecCCCCcccccCCcchHHHHHHHHHHHHhhCCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhhcCC
Q psy2392 940 EIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNG 1019 (1165)
Q Consensus 940 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~~~g 1019 (1165)
.+++
T Consensus 99 ----------------------------------------------------------------------------~~p~ 102 (265)
T d1r7ra3 99 ----------------------------------------------------------------------------AAPC 102 (265)
T ss_dssp ----------------------------------------------------------------------------TCSE
T ss_pred ----------------------------------------------------------------------------cCCc
Confidence 1578
Q ss_pred eeeehhhhhhhccCCCCCCCC-ccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhh--ccCC
Q psy2392 1020 IIFLDEIDKITTRSSQNNNTD-ISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFP 1096 (1165)
Q Consensus 1020 IvfiDEiDki~~~~~~~~~~~-~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~--gR~~ 1096 (1165)
|+||||||.+...++...+.. ...+-+-..||..+++ ...+.++++||+. +.|+++.|+|+ |||.
T Consensus 103 il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~--------~~~~~~v~vi~tt----n~~~~ld~al~r~gRf~ 170 (265)
T d1r7ra3 103 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDG--------MSTKKNVFIIGAT----NRPDIIDPAILRPGRLD 170 (265)
T ss_dssp EEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------------CCEEEECC----BSCTTTSCGGGSSTTSE
T ss_pred ceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhC--------cCCCCCEEEEEeC----CCchhCCHHHhCCCCcc
Confidence 999999999998743222211 1111133567777764 2345568888875 58999999997 5999
Q ss_pred eEEEcCCCCHHHHHHHHh
Q psy2392 1097 IRVELDSLSISDFTRIMT 1114 (1165)
Q Consensus 1097 i~v~l~~l~~~~l~~il~ 1114 (1165)
..++|++++.++..+||+
T Consensus 171 ~~i~~~~p~~~~R~~il~ 188 (265)
T d1r7ra3 171 QLIYIPLPDEKSRVAILK 188 (265)
T ss_dssp EEEECCCCCCHHHHHHHH
T ss_pred EEEEecchHHHHHHHHHH
Confidence 999999999999999998
No 29
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.64 E-value=6.8e-17 Score=167.57 Aligned_cols=49 Identities=24% Similarity=0.366 Sum_probs=45.9
Q ss_pred eecCCcccccCCccccccccccCcchHHHHhhhhcccccccCCCHHHHHHHHH
Q psy2392 624 VRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676 (1165)
Q Consensus 624 LaRG~l~~IGATT~~Eyr~~IekD~Al~RR~lFq~~Vi~v~EPs~edT~~IL~ 676 (1165)
|+||+++|||+||++||+++|++|+||.|| |+ +|. |.||+.++|+.||+
T Consensus 147 L~rg~l~~IgatT~eey~~~~e~d~aL~rr--F~-~I~-V~Ep~~e~t~~IL~ 195 (195)
T d1jbka_ 147 LARGELHCVGATTLDEYRQYIEKDAALERR--FQ-KVF-VAEPSVEDTIAILR 195 (195)
T ss_dssp HHTTSCCEEEEECHHHHHHHTTTCHHHHTT--EE-EEE-CCCCCHHHHHTTCC
T ss_pred HhCCCceEEecCCHHHHHHHHHcCHHHHhc--CC-Eee-cCCCCHHHHHHHhC
Confidence 568999999999999999999999999999 99 677 99999999999874
No 30
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.64 E-value=1.2e-15 Score=163.77 Aligned_cols=124 Identities=19% Similarity=0.315 Sum_probs=92.9
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
.+.||||||+|++++. .|+.||..||.. ..++.||++. ++++.+.|.+++|+.
T Consensus 115 ~~kviiIde~d~l~~~-------------~q~~Llk~lE~~----------~~~~~~il~t----n~~~~i~~~i~SRc~ 167 (239)
T d1njfa_ 115 RFKVYLIDEVHMLSRH-------------SFNALLKTLEEP----------PEHVKFLLAT----TDPQKLPVTILSRCL 167 (239)
T ss_dssp SSEEEEEETGGGSCHH-------------HHHHHHHHHHSC----------CTTEEEEEEE----SCGGGSCHHHHTTSE
T ss_pred CCEEEEEECcccCCHH-------------HHHHHHHHHhcC----------CCCeEEEEEc----CCccccChhHhhhhc
Confidence 4569999999999755 677999999852 3455566663 567889999999995
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhh
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVS 578 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~ 578 (1165)
.+.|.+++.+++.+++. ..+..+++ .+++++++.|+..+ ++..|++.+.+++++...
T Consensus 168 -~i~~~~~~~~~i~~~l~-----------~i~~~e~~--~~~~~~l~~i~~~s--------~Gd~R~ain~l~~~~~~~- 224 (239)
T d1njfa_ 168 -QFHLKALDVEQIRHQLE-----------HILNEEHI--AHEPRALQLLARAA--------EGSLRDALSLTDQAIASG- 224 (239)
T ss_dssp -EEECCCCCHHHHHHHHH-----------HHHHHHTC--CBCHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHT-
T ss_pred -ccccccCcHHHhhhHHH-----------HHHhhhcc--CCCHHHHHHHHHHc--------CCCHHHHHHHHHHHHHhC-
Confidence 57999999999998873 23344565 67899999998876 578999999988765432
Q ss_pred cccCCCeeEEcccccccccc
Q psy2392 579 FNSNNISLLVDADYVNSRLG 598 (1165)
Q Consensus 579 ~~~~~~~~~i~~~~v~~~~~ 598 (1165)
.+ .|+.+.|++.++
T Consensus 225 ---~~---~I~~~~v~~~lg 238 (239)
T d1njfa_ 225 ---DG---QVSTQAVSAMLG 238 (239)
T ss_dssp ---TT---SBCHHHHHHHHT
T ss_pred ---CC---CcCHHHHHHHhC
Confidence 11 267777766553
No 31
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.63 E-value=2.6e-16 Score=166.68 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=94.1
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
...|+||||+|.+... .|..|+..+|.. +.++.|+++. +.+..+.|.+++|+.
T Consensus 99 ~~kiiiiDe~d~~~~~-------------~~~~Ll~~le~~----------~~~~~~~~~~----~~~~~i~~~i~sr~~ 151 (227)
T d1sxjc2 99 GFKLIILDEADAMTNA-------------AQNALRRVIERY----------TKNTRFCVLA----NYAHKLTPALLSQCT 151 (227)
T ss_dssp SCEEEEETTGGGSCHH-------------HHHHHHHHHHHT----------TTTEEEEEEE----SCGGGSCHHHHTTSE
T ss_pred CeEEEEEeccccchhh-------------HHHHHHHHhhhc----------ccceeecccc----CcHHHhHHHHHHHHh
Confidence 3569999999998765 567899999853 3455555542 567789999999986
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhh
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVS 578 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~ 578 (1165)
. +.|++++.+++.++|. ..+..+|+ .+++++++.|++.+ +++.|.+.+.++.+....
T Consensus 152 ~-i~~~~~~~~~i~~~l~-----------~I~~~e~i--~i~~~~l~~i~~~s--------~Gd~R~ain~Lq~~~~~~- 208 (227)
T d1sxjc2 152 R-FRFQPLPQEAIERRIA-----------NVLVHEKL--KLSPNAEKALIELS--------NGDMRRVLNVLQSCKATL- 208 (227)
T ss_dssp E-EECCCCCHHHHHHHHH-----------HHHHTTTC--CBCHHHHHHHHHHH--------TTCHHHHHHHTTTTTTTT-
T ss_pred h-hccccccccccccccc-----------cccccccc--cCCHHHHHHHHHHc--------CCcHHHHHHHHHHHHHhc-
Confidence 5 6999999999999884 34556676 67899999999988 568999988887653211
Q ss_pred cccCCCeeEEcccccccccc
Q psy2392 579 FNSNNISLLVDADYVNSRLG 598 (1165)
Q Consensus 579 ~~~~~~~~~i~~~~v~~~~~ 598 (1165)
..+ ..-.||.+.|++.++
T Consensus 209 -~~~-~~~~It~~~v~e~~g 226 (227)
T d1sxjc2 209 -DNP-DEDEISDDVIYECCG 226 (227)
T ss_dssp -CSS-SCCCBCHHHHHHHTT
T ss_pred -CCC-CCCeeCHHHHHHHhC
Confidence 111 114577777777665
No 32
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.61 E-value=1.6e-15 Score=160.97 Aligned_cols=107 Identities=28% Similarity=0.397 Sum_probs=83.6
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
.+.|+|+||+|.+... .|..|+++++.. ..++.||++. +.++.+.+.|++|+.
T Consensus 109 ~~~iilide~d~~~~~-------------~~~~ll~~l~~~----------~~~~~~i~~~----n~~~~i~~~l~sR~~ 161 (231)
T d1iqpa2 109 SFKIIFLDEADALTQD-------------AQQALRRTMEMF----------SSNVRFILSC----NYSSKIIEPIQSRCA 161 (231)
T ss_dssp SCEEEEEETGGGSCHH-------------HHHHHHHHHHHT----------TTTEEEEEEE----SCGGGSCHHHHHTEE
T ss_pred CceEEeehhhhhcchh-------------HHHHHhhhcccC----------CcceEEEecc----CChhhchHhHhCccc
Confidence 4679999999998766 566888888742 3456677663 456678899999997
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHH
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 574 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l 574 (1165)
. +.|.+++.+++..+|+ ..+..+++ .+++++++.|++.+ ++++|.+.+.++.+.
T Consensus 162 ~-i~~~~~~~~~~~~~l~-----------~~~~~e~i--~i~~~~l~~I~~~~--------~gdiR~ai~~Lq~~~ 215 (231)
T d1iqpa2 162 I-FRFRPLRDEDIAKRLR-----------YIAENEGL--ELTEEGLQAILYIA--------EGDMRRAINILQAAA 215 (231)
T ss_dssp E-EECCCCCHHHHHHHHH-----------HHHHTTTC--EECHHHHHHHHHHH--------TTCHHHHHHHHHHHH
T ss_pred c-ccccccchhhHHHHHH-----------HHHHHhCC--CCCHHHHHHHHHHc--------CCCHHHHHHHHHHHH
Confidence 6 6999999999999984 33455665 67899999999977 578999888887664
No 33
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.60 E-value=3.3e-15 Score=158.15 Aligned_cols=108 Identities=20% Similarity=0.334 Sum_probs=83.5
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
...+|||||+|.+... .|+.|+..+|.. ..+..||++. +..+.+.|.|++|+.
T Consensus 101 ~~kviiiDe~d~~~~~-------------~~~~ll~~~e~~----------~~~~~~i~~~----~~~~~i~~~l~sr~~ 153 (224)
T d1sxjb2 101 KHKIVILDEADSMTAG-------------AQQALRRTMELY----------SNSTRFAFAC----NQSNKIIEPLQSQCA 153 (224)
T ss_dssp CCEEEEEESGGGSCHH-------------HHHTTHHHHHHT----------TTTEEEEEEE----SCGGGSCHHHHTTSE
T ss_pred ceEEEEEecccccchh-------------HHHHHhhhcccc----------ccceeeeecc----CchhhhhhHHHHHHH
Confidence 3569999999999866 566888888753 3344455542 345678899999996
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHH
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLE 575 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~ 575 (1165)
. +.|++++.+++..+|. ..+..+|+ .+++++++.|++.+ +++.|.+.+.++.++.
T Consensus 154 ~-i~~~~~~~~~i~~~l~-----------~i~~~e~~--~i~~~~l~~I~~~s--------~Gd~R~ai~~Lq~~~~ 208 (224)
T d1sxjb2 154 I-LRYSKLSDEDVLKRLL-----------QIIKLEDV--KYTNDGLEAIIFTA--------EGDMRQAINNLQSTVA 208 (224)
T ss_dssp E-EECCCCCHHHHHHHHH-----------HHHHHHTC--CBCHHHHHHHHHHH--------TTCHHHHHHHHHHHHH
T ss_pred H-hhhcccchhhhHHHHH-----------HHHHhccc--CCCHHHHHHHHHHc--------CCcHHHHHHHHHHHHH
Confidence 5 7999999999999984 23445566 57899999999988 6789999999988764
No 34
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.59 E-value=1e-15 Score=162.36 Aligned_cols=128 Identities=18% Similarity=0.204 Sum_probs=91.6
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
++.|+||||+|.+... .++.|+.+++- ...+..||.+. +.++.+.+.+++|+.
T Consensus 108 ~~~viiiDe~d~l~~~-------------~~~~l~~~~~~----------~~~~~~~i~~~----~~~~~~~~~l~sr~~ 160 (237)
T d1sxjd2 108 PYKIIILDEADSMTAD-------------AQSALRRTMET----------YSGVTRFCLIC----NYVTRIIDPLASQCS 160 (237)
T ss_dssp SCEEEEETTGGGSCHH-------------HHHHHHHHHHH----------TTTTEEEEEEE----SCGGGSCHHHHHHSE
T ss_pred CceEEEEecccccCHH-------------HHHHHhhcccc----------ccccccccccc----cccccccccccchhh
Confidence 4569999999999765 44467776653 23344455442 455678899999995
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhh
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVS 578 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~ 578 (1165)
.|.|++++.+++.++|+ ..+..+++ .+++++++.|++.+ ++++|.+.+.|+.......
T Consensus 161 -~i~f~~~~~~~~~~~L~-----------~i~~~e~i--~i~~~~l~~ia~~s--------~gd~R~ai~~L~~~~~~~~ 218 (237)
T d1sxjd2 161 -KFRFKALDASNAIDRLR-----------FISEQENV--KCDDGVLERILDIS--------AGDLRRGITLLQSASKGAQ 218 (237)
T ss_dssp -EEECCCCCHHHHHHHHH-----------HHHHTTTC--CCCHHHHHHHHHHT--------SSCHHHHHHHHHHTHHHHH
T ss_pred -hhccccccccccchhhh-----------hhhhhhcC--cCCHHHHHHHHHHc--------CCCHHHHHHHHHHHHHhch
Confidence 57999999999999984 23455666 68999999999877 5789999999988765544
Q ss_pred cccCCCeeEEccccccccc
Q psy2392 579 FNSNNISLLVDADYVNSRL 597 (1165)
Q Consensus 579 ~~~~~~~~~i~~~~v~~~~ 597 (1165)
+..... .||.+.|++.+
T Consensus 219 ~~~~~~--~It~~~i~e~~ 235 (237)
T d1sxjd2 219 YLGDGK--NITSTQVEELA 235 (237)
T ss_dssp HHCSCC--CCCHHHHHHHH
T ss_pred hcCCCC--ccCHHHHHHhh
Confidence 333322 36777776654
No 35
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.57 E-value=2.7e-15 Score=160.92 Aligned_cols=91 Identities=21% Similarity=0.339 Sum_probs=73.6
Q ss_pred CeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCeE
Q psy2392 1019 GIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIR 1098 (1165)
Q Consensus 1019 gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i~ 1098 (1165)
.|+||||+|++... .|+.||++||... .+..||++. ++++.++|.+++||-+
T Consensus 117 kviiIde~d~l~~~-------------~q~~Llk~lE~~~----------~~~~~il~t----n~~~~i~~~i~SRc~~- 168 (239)
T d1njfa_ 117 KVYLIDEVHMLSRH-------------SFNALLKTLEEPP----------EHVKFLLAT----TDPQKLPVTILSRCLQ- 168 (239)
T ss_dssp EEEEEETGGGSCHH-------------HHHHHHHHHHSCC----------TTEEEEEEE----SCGGGSCHHHHTTSEE-
T ss_pred EEEEEECcccCCHH-------------HHHHHHHHHhcCC----------CCeEEEEEc----CCccccChhHhhhhcc-
Confidence 48999999999765 7889999999632 344566653 4788999999999964
Q ss_pred EEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1099 VELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1099 v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
+.|.+++.+++.+++. ..+..+|+ .+++++++.|+..|.
T Consensus 169 i~~~~~~~~~i~~~l~-----------~i~~~e~~--~~~~~~l~~i~~~s~ 207 (239)
T d1njfa_ 169 FHLKALDVEQIRHQLE-----------HILNEEHI--AHEPRALQLLARAAE 207 (239)
T ss_dssp EECCCCCHHHHHHHHH-----------HHHHHHTC--CBCHHHHHHHHHHTT
T ss_pred cccccCcHHHhhhHHH-----------HHHhhhcc--CCCHHHHHHHHHHcC
Confidence 7999999999988887 45566677 678999999998774
No 36
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=1.6e-15 Score=160.59 Aligned_cols=92 Identities=22% Similarity=0.298 Sum_probs=74.3
Q ss_pred CeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCeE
Q psy2392 1019 GIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIR 1098 (1165)
Q Consensus 1019 gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i~ 1098 (1165)
.|+||||+|.+... .|..|+.++|.... +..||++ .+.++.+.|.+++||-.
T Consensus 101 kiiiiDe~d~~~~~-------------~~~~Ll~~le~~~~----------~~~~~~~----~~~~~~i~~~i~sr~~~- 152 (227)
T d1sxjc2 101 KLIILDEADAMTNA-------------AQNALRRVIERYTK----------NTRFCVL----ANYAHKLTPALLSQCTR- 152 (227)
T ss_dssp EEEEETTGGGSCHH-------------HHHHHHHHHHHTTT----------TEEEEEE----ESCGGGSCHHHHTTSEE-
T ss_pred EEEEEeccccchhh-------------HHHHHHHHhhhccc----------ceeeccc----cCcHHHhHHHHHHHHhh-
Confidence 49999999999766 78899999996433 3344443 24677899999999865
Q ss_pred EEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhc
Q psy2392 1099 VELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYC 1151 (1165)
Q Consensus 1099 v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~ 1151 (1165)
+.|++++.+++.++|. ..+..||+ .+++++++.||+.+..
T Consensus 153 i~~~~~~~~~i~~~l~-----------~I~~~e~i--~i~~~~l~~i~~~s~G 192 (227)
T d1sxjc2 153 FRFQPLPQEAIERRIA-----------NVLVHEKL--KLSPNAEKALIELSNG 192 (227)
T ss_dssp EECCCCCHHHHHHHHH-----------HHHHTTTC--CBCHHHHHHHHHHHTT
T ss_pred hccccccccccccccc-----------cccccccc--cCCHHHHHHHHHHcCC
Confidence 6999999999999998 56777888 6789999999998753
No 37
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=1.8e-15 Score=160.18 Aligned_cols=92 Identities=24% Similarity=0.357 Sum_probs=73.3
Q ss_pred CCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCe
Q psy2392 1018 NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPI 1097 (1165)
Q Consensus 1018 ~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i 1097 (1165)
..+|||||+|.+... .|..|+..+|.....+ .||++. +..+.+.|.|++||-+
T Consensus 102 ~kviiiDe~d~~~~~-------------~~~~ll~~~e~~~~~~----------~~i~~~----~~~~~i~~~l~sr~~~ 154 (224)
T d1sxjb2 102 HKIVILDEADSMTAG-------------AQQALRRTMELYSNST----------RFAFAC----NQSNKIIEPLQSQCAI 154 (224)
T ss_dssp CEEEEEESGGGSCHH-------------HHHTTHHHHHHTTTTE----------EEEEEE----SCGGGSCHHHHTTSEE
T ss_pred eEEEEEecccccchh-------------HHHHHhhhccccccce----------eeeecc----CchhhhhhHHHHHHHH
Confidence 459999999999876 7889999998654444 333332 3556788999999975
Q ss_pred EEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1098 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1098 ~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
+.|++++.+++.++|. ..++.||+ .+++++++.|++.|.
T Consensus 155 -i~~~~~~~~~i~~~l~-----------~i~~~e~~--~i~~~~l~~I~~~s~ 193 (224)
T d1sxjb2 155 -LRYSKLSDEDVLKRLL-----------QIIKLEDV--KYTNDGLEAIIFTAE 193 (224)
T ss_dssp -EECCCCCHHHHHHHHH-----------HHHHHHTC--CBCHHHHHHHHHHHT
T ss_pred -hhhcccchhhhHHHHH-----------HHHHhccc--CCCHHHHHHHHHHcC
Confidence 7999999999999998 55667788 578999999999875
No 38
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.56 E-value=3.8e-15 Score=158.09 Aligned_cols=93 Identities=30% Similarity=0.430 Sum_probs=74.8
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCC
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 1096 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~ 1096 (1165)
...|+++||+|.+... .|..|+++++... .++.||++. +.++.+.+.|++|+.
T Consensus 109 ~~~iilide~d~~~~~-------------~~~~ll~~l~~~~----------~~~~~i~~~----n~~~~i~~~l~sR~~ 161 (231)
T d1iqpa2 109 SFKIIFLDEADALTQD-------------AQQALRRTMEMFS----------SNVRFILSC----NYSSKIIEPIQSRCA 161 (231)
T ss_dssp SCEEEEEETGGGSCHH-------------HHHHHHHHHHHTT----------TTEEEEEEE----SCGGGSCHHHHHTEE
T ss_pred CceEEeehhhhhcchh-------------HHHHHhhhcccCC----------cceEEEecc----CChhhchHhHhCccc
Confidence 4569999999999876 7888999988543 344566654 356778899999997
Q ss_pred eEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1097 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1097 i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
+ +.|.+++.+++..+|+ ..++.+|+ .+++++++.||+.+-
T Consensus 162 ~-i~~~~~~~~~~~~~l~-----------~~~~~e~i--~i~~~~l~~I~~~~~ 201 (231)
T d1iqpa2 162 I-FRFRPLRDEDIAKRLR-----------YIAENEGL--ELTEEGLQAILYIAE 201 (231)
T ss_dssp E-EECCCCCHHHHHHHHH-----------HHHHTTTC--EECHHHHHHHHHHHT
T ss_pred c-ccccccchhhHHHHHH-----------HHHHHhCC--CCCHHHHHHHHHHcC
Confidence 6 6999999999999998 45667787 678999999998763
No 39
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.52 E-value=5.1e-16 Score=172.87 Aligned_cols=140 Identities=15% Similarity=0.166 Sum_probs=103.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC--CCceEEeccccccccccccchhhHHHHHHHHHhhhhhhHHHHHHHhHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN--APFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 296 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~--~~~i~ld~s~~~~~GyvG~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1165)
+++||+||||||||.+|++||.+++ .+|+.++++++.++ |+|.. +..++++|+.+
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~-~~G~~-e~~~~~~f~~a--------------------- 180 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSG-YNTDF-NVFVDDIARAM--------------------- 180 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTT-CBCCH-HHHHHHHHHHH---------------------
T ss_pred ceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhc-ccchH-HHHHHHHHHHH---------------------
Confidence 5667799999999999999999985 78999999999985 99998 45577777662
Q ss_pred HHHHHhhcCCCcCCCCccccCCcCcchhhHHHHHHHhhcCCCCCcEEEEEecCCCCcccccCCcchhHHhHHHHHHhhhc
Q psy2392 297 DRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVI 376 (1165)
Q Consensus 297 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (1165)
T Consensus 181 -------------------------------------------------------------------------------- 180 (321)
T d1w44a_ 181 -------------------------------------------------------------------------------- 180 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccceeeHHHHHHHHHHHHHHhhcChhHHHHHHHhhhccceEEEEecchhhhccCCCCCCCccchhhhhhhhcccc
Q psy2392 377 GNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLV 456 (1165)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~ 456 (1165)
.+++||||||||.+..++..+.+.... +.+.+.||..|
T Consensus 181 -----------------------------------------~~~~ilf~DEid~~~~~r~~~~~~~~~-~r~v~~lL~e~ 218 (321)
T d1w44a_ 181 -----------------------------------------LQHRVIVIDSLKNVIGAAGGNTTSGGI-SRGAFDLLSDI 218 (321)
T ss_dssp -----------------------------------------HHCSEEEEECCTTTC-----------C-CHHHHHHHHHH
T ss_pred -----------------------------------------hhccEEEeehhhhhccccccCCCCCcc-hhhhhhhhhhc
Confidence 125799999999999887653332222 23566788888
Q ss_pred cCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhh------CCCCeeEecCCCCHHHHHHHHh
Q psy2392 457 EGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ------GRFPIRVELDSLSISDFTRIMT 516 (1165)
Q Consensus 457 Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~------~R~~~~v~~~~L~~~~l~~Il~ 516 (1165)
+|.. ..+++++|+++ ||.++.|.+. +||+..|.+..++.++..+||.
T Consensus 219 dg~~--------~~~~v~viaat-----N~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~ 271 (321)
T d1w44a_ 219 GAMA--------ASRGCVVIASL-----NPTSNDDKIVELVKEASRSNSTSLVISTDVDGEWQVLT 271 (321)
T ss_dssp HHHH--------HHHTCEEEEEC-----CCCCCCHHHHHHHHHHHHHSCSEEEEECSSTTEEEEEE
T ss_pred cccc--------cCCCeEEEEeC-----CCcccccchhhhhhccCcccceeecCCCChHHHHHHHH
Confidence 8632 34578899984 5777666553 8999999999999999888884
No 40
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.49 E-value=1.4e-15 Score=169.38 Aligned_cols=140 Identities=15% Similarity=0.149 Sum_probs=101.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC--CCeEEEecCCcccccccccChhhHHHHHHHHHHhhhhhhHHHHhhhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN--APFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 894 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~--~~fi~l~~se~~~~GyvG~~~~~~l~~lf~~a~~~~~~~~~~~~~~~~~~~a~ 894 (1165)
+++||+||||||||.+|+++|.+++ .+|+.++++++.++ |+|..+ ..++++|+.|
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~-~~G~~e-~~~~~~f~~a--------------------- 180 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSG-YNTDFN-VFVDDIARAM--------------------- 180 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTT-CBCCHH-HHHHHHHHHH---------------------
T ss_pred ceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhc-ccchHH-HHHHHHHHHH---------------------
Confidence 4556689999999999999999985 78999999999998 999984 4578877554
Q ss_pred HHHHHhhcCCcccCCCccccCCcccchhhHHHHHHhhccCCCCCeEEEEEecCCCCcccccCCcchHHHHHHHHHHHHhh
Q psy2392 895 DRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVI 974 (1165)
Q Consensus 895 ~~vv~~ll~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~g~ld~r~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1165)
T Consensus 181 -------------------------------------------------------------------------------- 180 (321)
T d1w44a_ 181 -------------------------------------------------------------------------------- 180 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccceeeeHHHHHHHHHHHHHhhcCCHHHHHHHHHHhhhcCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccc
Q psy2392 975 GNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLV 1054 (1165)
Q Consensus 975 ~~~~~~~~~~tvk~a~~~l~~~~~~~~~~~~~~~~~a~~~~~~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~ 1054 (1165)
.+++|+||||||.|++.+.++.+..... -+-+.||.-|
T Consensus 181 -----------------------------------------~~~~ilf~DEid~~~~~r~~~~~~~~~~-r~v~~lL~e~ 218 (321)
T d1w44a_ 181 -----------------------------------------LQHRVIVIDSLKNVIGAAGGNTTSGGIS-RGAFDLLSDI 218 (321)
T ss_dssp -----------------------------------------HHCSEEEEECCTTTC-----------CC-HHHHHHHHHH
T ss_pred -----------------------------------------hhccEEEeehhhhhccccccCCCCCcch-hhhhhhhhhc
Confidence 1357999999999998865433322221 2445677777
Q ss_pred cCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhh------ccCCeEEEcCCCCHHHHHHHHh
Q psy2392 1055 EGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ------GRFPIRVELDSLSISDFTRIMT 1114 (1165)
Q Consensus 1055 Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~------gR~~i~v~l~~l~~~~l~~il~ 1114 (1165)
+|. ....++++|++. +|+++.|.+- |||.-.|.+.+++.++-.+||.
T Consensus 219 dg~--------~~~~~v~viaat-----N~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~ 271 (321)
T d1w44a_ 219 GAM--------AASRGCVVIASL-----NPTSNDDKIVELVKEASRSNSTSLVISTDVDGEWQVLT 271 (321)
T ss_dssp HHH--------HHHHTCEEEEEC-----CCCCCCHHHHHHHHHHHHHSCSEEEEECSSTTEEEEEE
T ss_pred ccc--------ccCCCeEEEEeC-----CCcccccchhhhhhccCcccceeecCCCChHHHHHHHH
Confidence 753 344578888885 4877766553 8988888999999888888886
No 41
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=9.8e-15 Score=154.72 Aligned_cols=92 Identities=21% Similarity=0.257 Sum_probs=71.0
Q ss_pred CCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCe
Q psy2392 1018 NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPI 1097 (1165)
Q Consensus 1018 ~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i 1097 (1165)
..|+||||+|.+... .|+.|+.++|-.. .+..||.+. ..++.+.+.+++||.
T Consensus 109 ~~viiiDe~d~l~~~-------------~~~~l~~~~~~~~----------~~~~~i~~~----~~~~~~~~~l~sr~~- 160 (237)
T d1sxjd2 109 YKIIILDEADSMTAD-------------AQSALRRTMETYS----------GVTRFCLIC----NYVTRIIDPLASQCS- 160 (237)
T ss_dssp CEEEEETTGGGSCHH-------------HHHHHHHHHHHTT----------TTEEEEEEE----SCGGGSCHHHHHHSE-
T ss_pred ceEEEEecccccCHH-------------HHHHHhhcccccc----------ccccccccc----cccccccccccchhh-
Confidence 348999999999765 6678888777432 333344332 456678899999995
Q ss_pred EEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1098 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1098 ~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
.+.|++++.+++.++|+ .++..+|+ .+++++++.||+.+.
T Consensus 161 ~i~f~~~~~~~~~~~L~-----------~i~~~e~i--~i~~~~l~~ia~~s~ 200 (237)
T d1sxjd2 161 KFRFKALDASNAIDRLR-----------FISEQENV--KCDDGVLERILDISA 200 (237)
T ss_dssp EEECCCCCHHHHHHHHH-----------HHHHTTTC--CCCHHHHHHHHHHTS
T ss_pred hhccccccccccchhhh-----------hhhhhhcC--cCCHHHHHHHHHHcC
Confidence 57999999999999998 45667787 689999999999874
No 42
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=1.2e-13 Score=147.94 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=55.8
Q ss_pred ccEecchhhHHHHHHHHHhhhhhh----cccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQ----QITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 256 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~----~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~ 256 (1165)
++++|++++++.|..++.. |... .......+...+.++||+||||||||++|+++|++++.+++.+++++..+
T Consensus 14 ~dlig~~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~ 90 (253)
T d1sxja2 14 QQVCGNKGSVMKLKNWLAN-WENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRS 90 (253)
T ss_dssp GGCCSCHHHHHHHHHHHHT-HHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCC
T ss_pred HHhcCCHHHHHHHHHHHHh-hhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchh
Confidence 4899999999999998864 2211 11112222233579999999999999999999999999999999987653
No 43
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.46 E-value=4.9e-14 Score=150.91 Aligned_cols=86 Identities=15% Similarity=0.162 Sum_probs=63.8
Q ss_pred HHHhhhHHHHHHHHhhhcccchHHHHHHHHHHHHhHhhhhc---ccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 765 IIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQ---ITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 765 i~~~~~~~~~l~~~L~~~IvGQ~~ak~~l~~~i~~~~~r~~---l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+|-++++|..+ ++++|++++++.|..++........ ......+...++++||+||||||||++|+++|+.++
T Consensus 3 lW~eky~P~~~-----~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~ 77 (253)
T d1sxja2 3 LWTVKYAPTNL-----QQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELG 77 (253)
T ss_dssp CHHHHTCCSSG-----GGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred ccccCcCCCCH-----HHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 34567788776 8999999999999998864211110 011111222347899999999999999999999999
Q ss_pred CCeEEEecCCcccc
Q psy2392 842 APFIKIEATKFTEV 855 (1165)
Q Consensus 842 ~~fi~l~~se~~~~ 855 (1165)
.+++.+++++..+.
T Consensus 78 ~~~~~~~~~~~~~~ 91 (253)
T d1sxja2 78 YDILEQNASDVRSK 91 (253)
T ss_dssp CEEEEECTTSCCCH
T ss_pred hhhhccccccchhh
Confidence 99999999886543
No 44
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.42 E-value=3.7e-13 Score=143.70 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=81.2
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
...+++|||+|.+... .|+.|+.++|. ...++.||+++ +.+..+.|.|++||.
T Consensus 131 ~~~iiiide~d~l~~~-------------~~~~l~~~~e~----------~~~~~~~Il~t----n~~~~i~~~l~sR~~ 183 (252)
T d1sxje2 131 RYKCVIINEANSLTKD-------------AQAALRRTMEK----------YSKNIRLIMVC----DSMSPIIAPIKSQCL 183 (252)
T ss_dssp CCEEEEEECTTSSCHH-------------HHHHHHHHHHH----------STTTEEEEEEE----SCSCSSCHHHHTTSE
T ss_pred CceEEEeccccccccc-------------cchhhhccccc----------ccccccceeee----ccccchhhhhhcchh
Confidence 4569999999998655 45578888874 23456677764 456778999999994
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHH
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 574 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l 574 (1165)
.|.|++++.+++.++|. ..+..+++.+. ++++++.|+..+ +++.|.+.+.++.+.
T Consensus 184 -~i~~~~~~~~~~~~~l~-----------~i~~~e~~~~~-~~~~l~~i~~~s--------~Gd~R~ai~~Lq~~~ 238 (252)
T d1sxje2 184 -LIRCPAPSDSEISTILS-----------DVVTNERIQLE-TKDILKRIAQAS--------NGNLRVSLLMLESMA 238 (252)
T ss_dssp -EEECCCCCHHHHHHHHH-----------HHHHHHTCEEC-CSHHHHHHHHHH--------TTCHHHHHHHHTHHH
T ss_pred -eeeecccchhhHHHHHH-----------HHHHHcCCCCC-cHHHHHHHHHHc--------CCcHHHHHHHHHHHH
Confidence 67999999999999984 23445676543 578999998877 578898888777654
No 45
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.37 E-value=6.5e-13 Score=142.84 Aligned_cols=152 Identities=14% Similarity=0.121 Sum_probs=90.3
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcc--cCCCCCCchhhhCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFH--LAKPSDLIPELQGR 496 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~--~~~p~~l~pel~~R 496 (1165)
...++++||+|.+...... ...+...|..+++-.. ......+..+|+..+.. ........|.+.+|
T Consensus 132 ~~~~~iide~d~l~~~~~~-------~~~~~~~l~~l~~~l~-----~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r 199 (287)
T d1w5sa2 132 HYLLVILDEFQSMLSSPRI-------AAEDLYTLLRVHEEIP-----SRDGVNRIGFLLVASDVRALSYMREKIPQVESQ 199 (287)
T ss_dssp CEEEEEEESTHHHHSCTTS-------CHHHHHHHHTHHHHSC-----CTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTT
T ss_pred CccccceeEEEEecccccc-------chhHHHHHHHHHHhcc-----hhhcccceeEEeecccHHHHHHHHhhccchhcc
Confidence 4668899999999866443 1112223333332100 00111222233322111 11122356889999
Q ss_pred CCeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHH
Q psy2392 497 FPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEE 576 (1165)
Q Consensus 497 ~~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~ 576 (1165)
++..+.|.+++.+++.+|++. .++.......|++++++.+|+.+..+. ...+.+|...+++...++.
T Consensus 200 ~~~~i~f~~y~~~el~~Il~~-----------r~~~~~~~~~~~~~al~~ia~~~~~~~--~~~gd~R~ai~~l~~a~~~ 266 (287)
T d1w5sa2 200 IGFKLHLPAYKSRELYTILEQ-----------RAELGLRDTVWEPRHLELISDVYGEDK--GGDGSARRAIVALKMACEM 266 (287)
T ss_dssp CSEEEECCCCCHHHHHHHHHH-----------HHHHHBCTTSCCHHHHHHHHHHHCGGG--TSCCCHHHHHHHHHHHHHH
T ss_pred cceeeeccCCcHHHHHHHHhh-----------hHHHhhccCCCCHHHHHHHHHHHhccc--cCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999951 122223344689999999999886531 1245689888888877655
Q ss_pred hhcccCCCeeEEcccccccccc
Q psy2392 577 VSFNSNNISLLVDADYVNSRLG 598 (1165)
Q Consensus 577 ~~~~~~~~~~~i~~~~v~~~~~ 598 (1165)
...+-. -.||.+.|++++.
T Consensus 267 A~~~~~---~~It~~~V~~A~~ 285 (287)
T d1w5sa2 267 AEAMGR---DSLSEDLVRKAVS 285 (287)
T ss_dssp HHHTTC---SSCCHHHHHHHHH
T ss_pred HHHcCC---CCCCHHHHHHHHh
Confidence 433322 3588888876553
No 46
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.36 E-value=4.7e-13 Score=142.88 Aligned_cols=93 Identities=18% Similarity=0.285 Sum_probs=72.4
Q ss_pred CCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCe
Q psy2392 1018 NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPI 1097 (1165)
Q Consensus 1018 ~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i 1097 (1165)
..+++|||+|.+... .|..|+.++|.. ..++.||++. +.+..+.|.|++|| .
T Consensus 132 ~~iiiide~d~l~~~-------------~~~~l~~~~e~~----------~~~~~~Il~t----n~~~~i~~~l~sR~-~ 183 (252)
T d1sxje2 132 YKCVIINEANSLTKD-------------AQAALRRTMEKY----------SKNIRLIMVC----DSMSPIIAPIKSQC-L 183 (252)
T ss_dssp CEEEEEECTTSSCHH-------------HHHHHHHHHHHS----------TTTEEEEEEE----SCSCSSCHHHHTTS-E
T ss_pred ceEEEeccccccccc-------------cchhhhcccccc----------cccccceeee----ccccchhhhhhcch-h
Confidence 348999999998665 577899988853 3445667664 46778899999999 4
Q ss_pred EEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1098 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1098 ~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
++.|++++.+++.++|. .++..||+.+ .++++++.||+.+.
T Consensus 184 ~i~~~~~~~~~~~~~l~-----------~i~~~e~~~~-~~~~~l~~i~~~s~ 224 (252)
T d1sxje2 184 LIRCPAPSDSEISTILS-----------DVVTNERIQL-ETKDILKRIAQASN 224 (252)
T ss_dssp EEECCCCCHHHHHHHHH-----------HHHHHHTCEE-CCSHHHHHHHHHHT
T ss_pred eeeecccchhhHHHHHH-----------HHHHHcCCCC-CcHHHHHHHHHHcC
Confidence 68999999999999998 4456678754 36889999998764
No 47
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.35 E-value=3.9e-12 Score=133.27 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=77.1
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
...|++|||+|+++.. .|+.||.+||. ...|+.||++. ++++.+.|.+++|+
T Consensus 108 ~~kviIide~d~l~~~-------------a~n~Llk~lEe----------p~~~~~fIl~t----~~~~~ll~tI~SRc- 159 (207)
T d1a5ta2 108 GAKVVWVTDAALLTDA-------------AANALLKTLEE----------PPAETWFFLAT----REPERLLATLRSRC- 159 (207)
T ss_dssp SCEEEEESCGGGBCHH-------------HHHHHHHHHTS----------CCTTEEEEEEE----SCGGGSCHHHHTTS-
T ss_pred ccceEEechhhhhhhh-------------hhHHHHHHHHh----------hcccceeeeee----cChhhhhhhhccee-
Confidence 4669999999999866 67799999996 35677788763 57788999999999
Q ss_pred eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHH
Q psy2392 499 IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570 (1165)
Q Consensus 499 ~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~i 570 (1165)
..+.|.+++.+++..+|++ .+.+++++++.+++.+ ++..|.+.+++
T Consensus 160 ~~i~~~~~~~~~~~~~L~~------------------~~~~~~~~~~~i~~~s--------~Gs~r~al~~l 205 (207)
T d1a5ta2 160 RLHYLAPPPEQYAVTWLSR------------------EVTMSQDALLAALRLS--------AGSPGAALALF 205 (207)
T ss_dssp EEEECCCCCHHHHHHHHHH------------------HCCCCHHHHHHHHHHT--------TTCHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHH------------------cCCCCHHHHHHHHHHc--------CCCHHHHHHHh
Confidence 5679999999999888841 1256899999999876 45566665543
No 48
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.33 E-value=6.5e-14 Score=144.95 Aligned_cols=65 Identities=22% Similarity=0.339 Sum_probs=55.8
Q ss_pred ccccccCcccccceee--eeecCCeEEEEccCHHHHHHhhhccchhhhhhccccceEEecCCCHHHHHHHHH
Q psy2392 9 SAKDSGMEKFQGTTIL--SVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78 (1165)
Q Consensus 9 ~~~~~~~~~~~~~~~l--aLARGel~~IgATT~~Eyr~~IekD~Al~RR~lFq~~V~~v~Eps~~~t~~IL~ 78 (1165)
+++.+. +.+|++|+| +|+||+|+||||||++||++||++|+||.|| || +|. |+|||.++|+.||+
T Consensus 129 ~~g~~~-g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rr--F~-~I~-V~Ep~~e~t~~IL~ 195 (195)
T d1jbka_ 129 GAGKAD-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR--FQ-KVF-VAEPSVEDTIAILR 195 (195)
T ss_dssp T-------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTT--EE-EEE-CCCCCHHHHHTTCC
T ss_pred cCCCCC-CcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhc--CC-Eee-cCCCCHHHHHHHhC
Confidence 455443 568999999 9999999999999999999999999999999 99 665 99999999999985
No 49
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.31 E-value=5.9e-12 Score=134.41 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=89.3
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCC-
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRF- 497 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~- 497 (1165)
...++++|++|.+..... ..+..+++-. ......++.||+++.- ......+.|.+.+|+
T Consensus 124 ~~~~~~~~~~d~~~~~~~-------------~~~~~~~~~~------~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~r~~ 183 (276)
T d1fnna2 124 LYMFLVLDDAFNLAPDIL-------------STFIRLGQEA------DKLGAFRIALVIVGHN-DAVLNNLDPSTRGIMG 183 (276)
T ss_dssp CCEEEEEETGGGSCHHHH-------------HHHHHHTTCH------HHHSSCCEEEEEEESS-THHHHTSCHHHHHHHT
T ss_pred cccccchhHHHHhhhhhh-------------hhHHHHHhcc------ccccccceEEeecCCc-hhhhhhcchhhhhhhc
Confidence 466888999998875522 1222222211 1112334556665431 111235778888875
Q ss_pred CeeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhcccc-CCccCcchhHHHHHHHHHH
Q psy2392 498 PIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINER-TENIGARRLYTAMEKLLEE 576 (1165)
Q Consensus 498 ~~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~-~~~~GAR~l~~~ie~~l~~ 576 (1165)
+..|.|.+++.+++.+||.. .+...+....+++++++.|++.+...... ...+.+|.+.+++++++..
T Consensus 184 ~~~i~~~~~~~~e~~~il~~-----------r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~ 252 (276)
T d1fnna2 184 KYVIRFSPYTKDQIFDILLD-----------RAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYA 252 (276)
T ss_dssp TCEEECCCCBHHHHHHHHHH-----------HHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHH
T ss_pred chhccccchhHHHHHHHHHH-----------HHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 45689999999999999941 12222334457999999999987432111 1235589999999888765
Q ss_pred hhcccCCCeeEEcccccccccccC
Q psy2392 577 VSFNSNNISLLVDADYVNSRLGDL 600 (1165)
Q Consensus 577 ~~~~~~~~~~~i~~~~v~~~~~~~ 600 (1165)
...+-. -.|+.+.|+++..++
T Consensus 253 A~~~~~---~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 253 AQQNGR---KHIAPEDVRKSSKEV 273 (276)
T ss_dssp HHHTTC---SSCCHHHHHHHHHHH
T ss_pred HHHcCC---CCcCHHHHHHHHHHH
Confidence 433322 247888887765543
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=2.1e-11 Score=127.60 Aligned_cols=87 Identities=13% Similarity=0.210 Sum_probs=71.0
Q ss_pred CCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCe
Q psy2392 1018 NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPI 1097 (1165)
Q Consensus 1018 ~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i 1097 (1165)
..|++|||+|++... .|+.||.+||.. ..|+.||+.. ++++.++|.+++|| .
T Consensus 109 ~kviIide~d~l~~~-------------a~n~Llk~lEep----------~~~~~fIl~t----~~~~~ll~tI~SRc-~ 160 (207)
T d1a5ta2 109 AKVVWVTDAALLTDA-------------AANALLKTLEEP----------PAETWFFLAT----REPERLLATLRSRC-R 160 (207)
T ss_dssp CEEEEESCGGGBCHH-------------HHHHHHHHHTSC----------CTTEEEEEEE----SCGGGSCHHHHTTS-E
T ss_pred cceEEechhhhhhhh-------------hhHHHHHHHHhh----------cccceeeeee----cChhhhhhhhccee-E
Confidence 459999999999876 899999999963 4556676653 57788999999999 5
Q ss_pred EEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHh
Q psy2392 1098 RVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150 (1165)
Q Consensus 1098 ~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~ 1150 (1165)
.+.|.+++.+++..+|++ .+.++++++..|++.|.
T Consensus 161 ~i~~~~~~~~~~~~~L~~------------------~~~~~~~~~~~i~~~s~ 195 (207)
T d1a5ta2 161 LHYLAPPPEQYAVTWLSR------------------EVTMSQDALLAALRLSA 195 (207)
T ss_dssp EEECCCCCHHHHHHHHHH------------------HCCCCHHHHHHHHHHTT
T ss_pred EEecCCCCHHHHHHHHHH------------------cCCCCHHHHHHHHHHcC
Confidence 679999999999888861 12468999999998775
No 51
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.23 E-value=2.6e-11 Score=135.57 Aligned_cols=132 Identities=18% Similarity=0.305 Sum_probs=81.7
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeee-ce--eecCceEEEEEeCCcccCCCCCCchhhhC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK-YG--IIKTDHILFIASGAFHLAKPSDLIPELQG 495 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~-~~--~~~t~~ilfI~~gaf~~~~p~~l~pel~~ 495 (1165)
..||+|||||.++.++ +|+.||..||.+.++.. .| ..--.+.++|+|.+ ..+..+.+.++.
T Consensus 127 ~~gvl~iDEi~~~~~~-------------~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~N---p~~~~l~~~llD 190 (333)
T d1g8pa_ 127 NRGYLYIDECNLLEDH-------------IVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGN---PEEGDLRPQLLD 190 (333)
T ss_dssp TTEEEEETTGGGSCHH-------------HHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEEC---SCSCCCCHHHHT
T ss_pred cccEeecccHHHHHHH-------------HHHHHhhhhcCCeEEecccCceecCCCCEEEEEecC---ccccccccchhh
Confidence 5799999999999776 88899999997766542 22 11123456677643 223569999999
Q ss_pred CCCeeEecCCCC-HHHHHHHHhhhhH------hHHHH--------HHHH--HhhcCCeeEeCHHHHHHHHHHHHhccccC
Q psy2392 496 RFPIRVELDSLS-ISDFTRIMTSTNV------CLTKQ--------YEAL--LATEGIKIEFVDDGIQRLAEIAYCINERT 558 (1165)
Q Consensus 496 R~~~~v~~~~L~-~~~l~~Il~~~~~------~l~~~--------~~~l--l~~~~i~l~~~~~a~~~la~~a~~~~~~~ 558 (1165)
||++.|.+..+. .++..+++..... ....+ .... ....-..+.++++....++..+...
T Consensus 191 Rf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~---- 266 (333)
T d1g8pa_ 191 RFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIAL---- 266 (333)
T ss_dssp TCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHS----
T ss_pred hhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHc----
Confidence 999999988664 3433334321100 00000 0000 0111123567888888888888774
Q ss_pred CccCcchhHHHH
Q psy2392 559 ENIGARRLYTAM 570 (1165)
Q Consensus 559 ~~~GAR~l~~~i 570 (1165)
...+.|....++
T Consensus 267 ~~~S~R~~~~ll 278 (333)
T d1g8pa_ 267 GSDGLRGELTLL 278 (333)
T ss_dssp SSCSHHHHHHHH
T ss_pred CCCChHHHHHHH
Confidence 344788888776
No 52
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.20 E-value=2.1e-11 Score=136.41 Aligned_cols=120 Identities=17% Similarity=0.272 Sum_probs=74.5
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCcccee-eeee--ccCceEEEEecCCCCCCCCCCCchhhhc
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNT-KYGI--IKTDHILFIASGAFHLAKPSDLIPELQG 1093 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~-k~~~--~~t~~ilfI~~gaf~~~~p~dl~pel~g 1093 (1165)
+.||+|||||.++... +|..||..||...++. +.|. ..-.+.++|++.+ ..+..+.+.++.
T Consensus 127 ~~gvl~iDEi~~~~~~-------------~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~N---p~~~~l~~~llD 190 (333)
T d1g8pa_ 127 NRGYLYIDECNLLEDH-------------IVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGN---PEEGDLRPQLLD 190 (333)
T ss_dssp TTEEEEETTGGGSCHH-------------HHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEEC---SCSCCCCHHHHT
T ss_pred cccEeecccHHHHHHH-------------HHHHHhhhhcCCeEEecccCceecCCCCEEEEEecC---ccccccccchhh
Confidence 6799999999999876 9999999999776653 2221 1123455666644 344679999999
Q ss_pred cCCeEEEcCCCC-HHHHHHHHhhhHH----------------HhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhcc
Q psy2392 1094 RFPIRVELDSLS-ISDFTRIMTSTNV----------------CLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCI 1152 (1165)
Q Consensus 1094 R~~i~v~l~~l~-~~~l~~il~~~~~----------------~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~~ 1152 (1165)
||.+++.+..+. .++...++..... ..+.+........--++.++++....++..+...
T Consensus 191 Rf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~ 266 (333)
T d1g8pa_ 191 RFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIAL 266 (333)
T ss_dssp TCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHS
T ss_pred hhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHc
Confidence 999999998764 3443344331110 0000000000111123567888888888887765
No 53
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.11 E-value=3.2e-10 Score=120.62 Aligned_cols=64 Identities=25% Similarity=0.319 Sum_probs=48.3
Q ss_pred hcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcC----CCeEEEecCCc
Q psy2392 781 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSN----APFIKIEATKF 852 (1165)
Q Consensus 781 ~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~----~~fi~l~~se~ 852 (1165)
+.++|++..++.+..++...++..+ ..+++++|+||||||||++++.+++.+. ..++.+++..+
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~~--------~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~ 83 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNPG--------HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIY 83 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHSTT--------SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCC--------CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhh
Confidence 4678999999999988865422221 1258999999999999999999999983 44566666554
No 54
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.11 E-value=8.9e-11 Score=125.79 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=67.5
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCC--CCCCCCCchhhhcc
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFH--LAKPSDLIPELQGR 1094 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~--~~~p~dl~pel~gR 1094 (1165)
...++++||+|.+...... ...+...|..++|--. ......+..+|+..... ........|.+.+|
T Consensus 132 ~~~~~iide~d~l~~~~~~-------~~~~~~~l~~l~~~l~-----~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r 199 (287)
T d1w5sa2 132 HYLLVILDEFQSMLSSPRI-------AAEDLYTLLRVHEEIP-----SRDGVNRIGFLLVASDVRALSYMREKIPQVESQ 199 (287)
T ss_dssp CEEEEEEESTHHHHSCTTS-------CHHHHHHHHTHHHHSC-----CTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTT
T ss_pred CccccceeEEEEecccccc-------chhHHHHHHHHHHhcc-----hhhcccceeEEeecccHHHHHHHHhhccchhcc
Confidence 3458899999999876432 1113344444443110 11112233333332211 11122356889999
Q ss_pred CCeEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhc
Q psy2392 1095 FPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYC 1151 (1165)
Q Consensus 1095 ~~i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~ 1151 (1165)
++.++.|++++.+++.+|++ . .++.......|++++++.||+.+..
T Consensus 200 ~~~~i~f~~y~~~el~~Il~----~-------r~~~~~~~~~~~~~al~~ia~~~~~ 245 (287)
T d1w5sa2 200 IGFKLHLPAYKSRELYTILE----Q-------RAELGLRDTVWEPRHLELISDVYGE 245 (287)
T ss_dssp CSEEEECCCCCHHHHHHHHH----H-------HHHHHBCTTSCCHHHHHHHHHHHCG
T ss_pred cceeeeccCCcHHHHHHHHh----h-------hHHHhhccCCCCHHHHHHHHHHHhc
Confidence 99999999999999999998 1 1222233446899999999998854
No 55
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.01 E-value=9.5e-10 Score=118.00 Aligned_cols=130 Identities=19% Similarity=0.275 Sum_probs=85.4
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeece-eecCceEEEEEeCCccc---CCCCCCchhhh
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG-IIKTDHILFIASGAFHL---AKPSDLIPELQ 494 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~-~~~t~~ilfI~~gaf~~---~~p~~l~pel~ 494 (1165)
++|.+||||||.+... .|..|+..++...+.-..+ .....++-+|+++.... .....|.++|.
T Consensus 94 ~gGtL~l~~i~~L~~~-------------~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~~L~ 160 (247)
T d1ny5a2 94 DGGTLFLDEIGELSLE-------------AQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLY 160 (247)
T ss_dssp TTSEEEEESGGGCCHH-------------HHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHTTSSCHHHH
T ss_pred CCCEEEEeChHhCCHH-------------HHHHHHHHHHhCCEEECCCCCceecCeEEEEecCCCHHHHHHcCCCcHHHH
Confidence 6899999999999766 6778998887544321100 11122455666643221 11125888999
Q ss_pred CCCC-eeEecCCCC--HHHHHHHHhhhhHhHHHHHHHHHhhcCCe-eEeCHHHHHHHHHHHHhccccCCccCcchhHHHH
Q psy2392 495 GRFP-IRVELDSLS--ISDFTRIMTSTNVCLTKQYEALLATEGIK-IEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570 (1165)
Q Consensus 495 ~R~~-~~v~~~~L~--~~~l~~Il~~~~~~l~~~~~~ll~~~~i~-l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~i 570 (1165)
.||. ..|.++||. .+|+..|+ ..++.++.... +.. ..|+++|++.|..+.. .+..|-|++++
T Consensus 161 ~~l~~~~i~lPpLreR~~Di~~l~----~~~l~~~~~~~---~~~~~~ls~~al~~L~~~~W-------PGNl~EL~~~l 226 (247)
T d1ny5a2 161 YRLGVIEIEIPPLRERKEDIIPLA----NHFLKKFSRKY---AKEVEGFTKSAQELLLSYPW-------YGNVRELKNVI 226 (247)
T ss_dssp HHHTTEEEECCCGGGCHHHHHHHH----HHHHHHHHHHT---TCCCCEECHHHHHHHHHSCC-------TTHHHHHHHHH
T ss_pred hhcCeeeecCCChhhchhhHhhhh----hhhhhhhhhhc---CCCCCCCCHHHHHHHHhCCC-------CCHHHHHHHHH
Confidence 8865 558899995 57888887 45555444333 333 4699999999975442 24578999999
Q ss_pred HHHHH
Q psy2392 571 EKLLE 575 (1165)
Q Consensus 571 e~~l~ 575 (1165)
++++.
T Consensus 227 ~~a~~ 231 (247)
T d1ny5a2 227 ERAVL 231 (247)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98874
No 56
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.93 E-value=1.8e-09 Score=115.71 Aligned_cols=116 Identities=21% Similarity=0.311 Sum_probs=77.8
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeee--eccCceEEEEecCCCCC---CCCCCCchhh
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG--IIKTDHILFIASGAFHL---AKPSDLIPEL 1091 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~--~~~t~~ilfI~~gaf~~---~~p~dl~pel 1091 (1165)
+.|.+||||||.+... +|..|+.+++...+. +.| ...+.++-+|++..... .....|.++|
T Consensus 94 ~gGtL~l~~i~~L~~~-------------~Q~~L~~~l~~~~~~-~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~~L 159 (247)
T d1ny5a2 94 DGGTLFLDEIGELSLE-------------AQAKLLRVIESGKFY-RLGGRKEIEVNVRILAATNRNIKELVKEGKFREDL 159 (247)
T ss_dssp TTSEEEEESGGGCCHH-------------HHHHHHHHHHHSEEC-CBTCCSBEECCCEEEEEESSCHHHHHHTTSSCHHH
T ss_pred CCCEEEEeChHhCCHH-------------HHHHHHHHHHhCCEE-ECCCCCceecCeEEEEecCCCHHHHHHcCCCcHHH
Confidence 6899999999999776 899999999854432 112 11122455676654221 1113578899
Q ss_pred hccCC-eEEEcCCCC--HHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHHHhcc
Q psy2392 1092 QGRFP-IRVELDSLS--ISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCI 1152 (1165)
Q Consensus 1092 ~gR~~-i~v~l~~l~--~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~a~~~ 1152 (1165)
..||. +.|.++||. .+|+..|+. .++.++..-.+..- ..|+++|++.|.......
T Consensus 160 ~~~l~~~~i~lPpLreR~~Di~~l~~----~~l~~~~~~~~~~~--~~ls~~al~~L~~~~WPG 217 (247)
T d1ny5a2 160 YYRLGVIEIEIPPLRERKEDIIPLAN----HFLKKFSRKYAKEV--EGFTKSAQELLLSYPWYG 217 (247)
T ss_dssp HHHHTTEEEECCCGGGCHHHHHHHHH----HHHHHHHHHTTCCC--CEECHHHHHHHHHSCCTT
T ss_pred HhhcCeeeecCCChhhchhhHhhhhh----hhhhhhhhhcCCCC--CCCCHHHHHHHHhCCCCC
Confidence 99964 568999995 578988888 66666554443322 369999999997665544
No 57
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.79 E-value=1.1e-08 Score=106.04 Aligned_cols=61 Identities=11% Similarity=0.249 Sum_probs=47.5
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCCCCchhhhCCCC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFP 498 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~~l~pel~~R~~ 498 (1165)
++.|++|||+|+++.. .|++||+.||.. ..|.+||.. +++|+.+.|.+++|+.
T Consensus 79 ~~KviIId~ad~l~~~-------------aqNaLLK~LEEP----------p~~t~fiLi----t~~~~~ll~TI~SRC~ 131 (198)
T d2gnoa2 79 TRKYVIVHDCERMTQQ-------------AANAFLKALEEP----------PEYAVIVLN----TRRWHYLLPTIKSRVF 131 (198)
T ss_dssp SSEEEEETTGGGBCHH-------------HHHHTHHHHHSC----------CTTEEEEEE----ESCGGGSCHHHHTTSE
T ss_pred CCEEEEEeCccccchh-------------hhhHHHHHHhCC----------CCCceeeec----cCChhhCHHHHhcceE
Confidence 4569999999999877 677999999962 345566655 3577889999999996
Q ss_pred eeEecCCCC
Q psy2392 499 IRVELDSLS 507 (1165)
Q Consensus 499 ~~v~~~~L~ 507 (1165)
. +.|++++
T Consensus 132 ~-i~~~~p~ 139 (198)
T d2gnoa2 132 R-VVVNVPK 139 (198)
T ss_dssp E-EECCCCH
T ss_pred E-EeCCCch
Confidence 5 5787664
No 58
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.75 E-value=2.3e-08 Score=104.68 Aligned_cols=109 Identities=18% Similarity=0.303 Sum_probs=69.9
Q ss_pred cceEEEEecchhhhccCCCCCCCccchhhhhhhhcccccCceeeeeceeecCceEEEEEeCCcccCCCC---CCchhhhC
Q psy2392 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS---DLIPELQG 495 (1165)
Q Consensus 419 ~~~IifiDEidki~~~~~~~~~~~~~~~~vq~~lL~~~Eg~~v~~~~~~~~t~~ilfI~~gaf~~~~p~---~l~pel~~ 495 (1165)
...+++||+||.+.... ..|..|.-++... ......++|++. ..|. .+.|-|.+
T Consensus 97 ~~dll~iDDi~~i~~~~-----------~~~~~lf~lin~~--------~~~~~~iiits~----~~p~~l~~~~~dL~S 153 (213)
T d1l8qa2 97 SVDLLLLDDVQFLSGKE-----------RTQIEFFHIFNTL--------YLLEKQIILASD----RHPQKLDGVSDRLVS 153 (213)
T ss_dssp TCSEEEEECGGGGTTCH-----------HHHHHHHHHHHHH--------HHTTCEEEEEES----SCGGGCTTSCHHHHH
T ss_pred hccchhhhhhhhhcCch-----------HHHHHHHHHHHHH--------hhccceEEEecC----CcchhccccchHHHH
Confidence 46799999999997542 2555676666531 122233344442 2343 36688999
Q ss_pred CCC--eeEecCCCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHH
Q psy2392 496 RFP--IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKL 573 (1165)
Q Consensus 496 R~~--~~v~~~~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~ 573 (1165)
||. ..+.++ ++.+++.+||+ +.+..+|+ .++++++++|++.. -+.|.|..+|..+
T Consensus 154 RL~~g~~~~i~-p~d~~~~~iL~-----------~~a~~rgl--~l~~~v~~yl~~~~---------~~~R~L~~~l~~l 210 (213)
T d1l8qa2 154 RFEGGILVEIE-LDNKTRFKIIK-----------EKLKEFNL--ELRKEVIDYLLENT---------KNVREIEGKIKLI 210 (213)
T ss_dssp HHHTSEEEECC-CCHHHHHHHHH-----------HHHHHTTC--CCCHHHHHHHHHHC---------SSHHHHHHHHHHH
T ss_pred HhhCceEEEEC-CCcHHHHHHHH-----------HHHHHcCC--CCCHHHHHHHHHhc---------CcHHHHHHHHHHh
Confidence 865 566775 57778888873 22345564 78899999998753 1467777777654
No 59
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.59 E-value=9.8e-08 Score=99.74 Aligned_cols=95 Identities=20% Similarity=0.322 Sum_probs=64.3
Q ss_pred cCCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCC---CCchhhhc
Q psy2392 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS---DLIPELQG 1093 (1165)
Q Consensus 1017 ~~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~---dl~pel~g 1093 (1165)
+-.+++||+||.+++.. ..|..|.-++... ......++|++.. .|. .+.|-|.+
T Consensus 97 ~~dll~iDDi~~i~~~~-----------~~~~~lf~lin~~--------~~~~~~iiits~~----~p~~l~~~~~dL~S 153 (213)
T d1l8qa2 97 SVDLLLLDDVQFLSGKE-----------RTQIEFFHIFNTL--------YLLEKQIILASDR----HPQKLDGVSDRLVS 153 (213)
T ss_dssp TCSEEEEECGGGGTTCH-----------HHHHHHHHHHHHH--------HHTTCEEEEEESS----CGGGCTTSCHHHHH
T ss_pred hccchhhhhhhhhcCch-----------HHHHHHHHHHHHH--------hhccceEEEecCC----cchhccccchHHHH
Confidence 45699999999998652 3677777776632 1222333333322 343 35688999
Q ss_pred cCC--eEEEcCCCCHHHHHHHHhhhHHHhHHHHHHHHhhcCCceEeCHHHHHHHHHH
Q psy2392 1094 RFP--IRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEI 1148 (1165)
Q Consensus 1094 R~~--i~v~l~~l~~~~l~~il~~~~~~l~~q~~~l~~~egv~l~~~~~ai~~ia~~ 1148 (1165)
||. ..+.++ ++.++..+||+ ..+...|+ .++++++++|++.
T Consensus 154 RL~~g~~~~i~-p~d~~~~~iL~-----------~~a~~rgl--~l~~~v~~yl~~~ 196 (213)
T d1l8qa2 154 RFEGGILVEIE-LDNKTRFKIIK-----------EKLKEFNL--ELRKEVIDYLLEN 196 (213)
T ss_dssp HHHTSEEEECC-CCHHHHHHHHH-----------HHHHHTTC--CCCHHHHHHHHHH
T ss_pred HhhCceEEEEC-CCcHHHHHHHH-----------HHHHHcCC--CCCHHHHHHHHHh
Confidence 964 567886 57788888888 34455676 7889999999875
No 60
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.57 E-value=8.3e-08 Score=99.22 Aligned_cols=60 Identities=12% Similarity=0.239 Sum_probs=46.8
Q ss_pred CCeeeehhhhhhhccCCCCCCCCccchhhhhhccccccCccceeeeeeccCceEEEEecCCCCCCCCCCCchhhhccCCe
Q psy2392 1018 NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPI 1097 (1165)
Q Consensus 1018 ~gIvfiDEiDki~~~~~~~~~~~~~~~gvq~~lL~~~Eg~~v~~k~~~~~t~~ilfI~~gaf~~~~p~dl~pel~gR~~i 1097 (1165)
..|++|||+|+++.. .|+.||+++|...-+| .||.. +++|+.++|.+++||-+
T Consensus 80 ~KviIId~ad~l~~~-------------aqNaLLK~LEEPp~~t----------~fiLi----t~~~~~ll~TI~SRC~~ 132 (198)
T d2gnoa2 80 RKYVIVHDCERMTQQ-------------AANAFLKALEEPPEYA----------VIVLN----TRRWHYLLPTIKSRVFR 132 (198)
T ss_dssp SEEEEETTGGGBCHH-------------HHHHTHHHHHSCCTTE----------EEEEE----ESCGGGSCHHHHTTSEE
T ss_pred CEEEEEeCccccchh-------------hhhHHHHHHhCCCCCc----------eeeec----cCChhhCHHHHhcceEE
Confidence 359999999999987 8899999999754333 44443 35788899999999965
Q ss_pred EEEcCCCC
Q psy2392 1098 RVELDSLS 1105 (1165)
Q Consensus 1098 ~v~l~~l~ 1105 (1165)
+.|+++.
T Consensus 133 -i~~~~p~ 139 (198)
T d2gnoa2 133 -VVVNVPK 139 (198)
T ss_dssp -EECCCCH
T ss_pred -EeCCCch
Confidence 5787664
No 61
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=98.57 E-value=1.1e-08 Score=115.53 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=38.0
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCccccccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYV 858 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~Gyv 858 (1165)
+.++||+||||||||++|+++|+.++.+|+.+++|+..+..|+
T Consensus 154 ~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l 196 (362)
T d1svma_ 154 KRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFEL 196 (362)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHH
T ss_pred cCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHH
Confidence 4799999999999999999999999999999999986655333
No 62
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.33 E-value=2.1e-07 Score=98.84 Aligned_cols=41 Identities=24% Similarity=0.449 Sum_probs=38.0
Q ss_pred CCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccc
Q psy2392 815 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 855 (1165)
Q Consensus 815 ~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~ 855 (1165)
.|.++||+||||||||++|+++|+.++.+|+.+++++|.+.
T Consensus 31 ~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 31 SPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHH
Confidence 36899999999999999999999999999999999998764
No 63
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.28 E-value=3.3e-07 Score=97.32 Aligned_cols=40 Identities=25% Similarity=0.473 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccc
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 256 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~ 256 (1165)
.|.++||+||||||||++|++||+.++.+|+.+++++|..
T Consensus 31 ~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 31 SPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQ 70 (273)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHH
Confidence 4689999999999999999999999999999999998865
No 64
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.22 E-value=9.3e-06 Score=85.24 Aligned_cols=56 Identities=21% Similarity=0.291 Sum_probs=45.3
Q ss_pred ccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccccc
Q psy2392 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 256 (1165)
Q Consensus 183 ~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~ 256 (1165)
++++|.++-++.+.+. ....++++||+|||||+|++.+++.++..+..+++..+..
T Consensus 12 ~~f~GR~~el~~l~~~------------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~ 67 (283)
T d2fnaa2 12 KDFFDREKEIEKLKGL------------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEE 67 (283)
T ss_dssp GGSCCCHHHHHHHHHT------------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTT
T ss_pred hhCCChHHHHHHHHhc------------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccc
Confidence 5788988877765432 1268999999999999999999999999998888876644
No 65
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.16 E-value=4.7e-06 Score=87.60 Aligned_cols=57 Identities=23% Similarity=0.303 Sum_probs=46.3
Q ss_pred hcccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccc
Q psy2392 781 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 855 (1165)
Q Consensus 781 ~~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~ 855 (1165)
++++|.++.++.+... . ...++++||+|||||+|++.+++.++.++..+++..+...
T Consensus 12 ~~f~GR~~el~~l~~~---~---------------~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~ 68 (283)
T d2fnaa2 12 KDFFDREKEIEKLKGL---R---------------APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEER 68 (283)
T ss_dssp GGSCCCHHHHHHHHHT---C---------------SSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTC
T ss_pred hhCCChHHHHHHHHhc---c---------------CCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEecccccc
Confidence 6788998887776432 0 3678999999999999999999999999999888776544
No 66
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=98.05 E-value=1.5e-06 Score=97.69 Aligned_cols=77 Identities=17% Similarity=0.078 Sum_probs=53.4
Q ss_pred HHHHHHHHhcccEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 173 VIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 173 ~~~~l~~~L~~~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
.-..+...|+..+.|++.++-. .+.. +.+ + .| ++..+||+||||||||++|+++|+.++.+|+.++++
T Consensus 121 ~~~~il~~l~~~~~~~~~~i~~---~l~~-~~~-~-----~~--~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s 188 (362)
T d1svma_ 121 EWMAGVAWLHCLLPKMDSVVYD---FLKC-MVY-N-----IP--KKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLP 188 (362)
T ss_dssp HHHHHHHHHTTTSTTHHHHHHH---HHHH-HHH-C-----CT--TCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSC
T ss_pred HHHHHHHHHHhcccchHHHHHH---HHHH-HHh-C-----CC--CcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECc
Confidence 3445556666667677655533 3322 111 1 11 346999999999999999999999999999999999
Q ss_pred ccccccccc
Q psy2392 253 KFTEVGYVG 261 (1165)
Q Consensus 253 ~~~~~GyvG 261 (1165)
+..+.-|+|
T Consensus 189 ~~rs~~~l~ 197 (362)
T d1svma_ 189 LDRLNFELG 197 (362)
T ss_dssp TTTHHHHHG
T ss_pred chhhHHHHH
Confidence 876543343
No 67
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.65 E-value=1.1e-05 Score=77.66 Aligned_cols=30 Identities=43% Similarity=0.824 Sum_probs=27.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEE
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIK 846 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~ 846 (1165)
++++|.|||||||||+|+.||+.++.+|+.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 679999999999999999999999998864
No 68
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.64 E-value=5.7e-06 Score=81.50 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=34.7
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 855 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~~~ 855 (1165)
++.|++.|||||||||+|++||+.++.+++..++..+...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~~ 46 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFE 46 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhhh
Confidence 4889999999999999999999999999887776665543
No 69
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.63 E-value=6.6e-06 Score=81.02 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=35.2
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccccccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 257 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~~~~ 257 (1165)
++.++|.|||||||||||++||+.++.+++..++..+...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~~ 46 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFE 46 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhhh
Confidence 4899999999999999999999999999888777666553
No 70
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.62 E-value=9.1e-06 Score=78.24 Aligned_cols=33 Identities=39% Similarity=0.757 Sum_probs=29.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEec
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~ 251 (1165)
++++|+|||||||||+|+.||+.++.+|+..+.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~~ 35 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQ 35 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEeech
Confidence 579999999999999999999999988874443
No 71
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.41 E-value=2.5e-05 Score=76.25 Aligned_cols=30 Identities=43% Similarity=0.710 Sum_probs=27.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEE
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIK 846 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~ 846 (1165)
.+++|.|||||||||+|+.||+.++.+++.
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 578999999999999999999999988765
No 72
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.39 E-value=2.6e-05 Score=76.11 Aligned_cols=31 Identities=42% Similarity=0.720 Sum_probs=27.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEE
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~l 249 (1165)
.+++|+|||||||||+|+.||+.++.+++..
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~ 35 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINV 35 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEec
Confidence 5789999999999999999999998877643
No 73
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.38 E-value=3.1e-05 Score=76.32 Aligned_cols=31 Identities=32% Similarity=0.596 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
+++|+|||||||||+++.||+.++.+|+.+|
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 5778899999999999999999999998655
No 74
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.38 E-value=3.2e-05 Score=76.29 Aligned_cols=31 Identities=32% Similarity=0.596 Sum_probs=27.7
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
.++|+|||||||||+++.||+.++.+|+.+|
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 4778899999999999999999999998544
No 75
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.37 E-value=2.9e-05 Score=76.51 Aligned_cols=32 Identities=44% Similarity=0.632 Sum_probs=28.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
++++|+|||||||||+++.||+.++.+|+.+|
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 36899999999999999999999999988543
No 76
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.33 E-value=3.4e-05 Score=76.03 Aligned_cols=31 Identities=42% Similarity=0.618 Sum_probs=28.5
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
+++|+|||||||||+++.||+.++.+|+.+|
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 6899999999999999999999999988655
No 77
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.32 E-value=3.8e-05 Score=76.07 Aligned_cols=32 Identities=31% Similarity=0.620 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
..++|+|||||||||+|+.||+.+|.+|+..|
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEehh
Confidence 56889999999999999999999999988654
No 78
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.31 E-value=4e-05 Score=75.89 Aligned_cols=32 Identities=31% Similarity=0.620 Sum_probs=28.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
..++|+|||||||||+|+.||+.+|.+|+..|
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEehh
Confidence 45889999999999999999999999987543
No 79
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.29 E-value=4.6e-05 Score=74.61 Aligned_cols=37 Identities=30% Similarity=0.505 Sum_probs=32.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCcc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 853 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~~ 853 (1165)
.-++|.|||||||||+|+.|++.++.+++.++...+.
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~~ 41 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLW 41 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHHH
Confidence 5688999999999999999999999999999876543
No 80
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.22 E-value=5.5e-05 Score=74.06 Aligned_cols=36 Identities=31% Similarity=0.552 Sum_probs=32.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~ 254 (1165)
.-++|.|||||||||+|+.|++.++.+++.++...+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 568899999999999999999999999999887554
No 81
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.21 E-value=0.00012 Score=71.40 Aligned_cols=35 Identities=23% Similarity=0.459 Sum_probs=31.0
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEecC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 850 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~s 850 (1165)
.+-++|.||||+||||+|+.|++.++.+++.++..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d 37 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD 37 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecc
Confidence 36789999999999999999999999988887753
No 82
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.20 E-value=0.00011 Score=71.50 Aligned_cols=35 Identities=23% Similarity=0.459 Sum_probs=30.9
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
+.-++|+||||+||||+|++|++.++.+++.++..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d 37 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD 37 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecc
Confidence 36789999999999999999999999888877753
No 83
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.14 E-value=9.1e-05 Score=72.31 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
++-++|+|||||||||+|+.||+.++.+++..+
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 467889999999999999999999987665444
No 84
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.13 E-value=9.5e-05 Score=72.16 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=27.8
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 847 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l 847 (1165)
++-++|+|||||||||+|+.|++.++.+++..
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~ 37 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDG 37 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCeech
Confidence 46788899999999999999999998876543
No 85
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.07 E-value=0.00017 Score=70.35 Aligned_cols=27 Identities=37% Similarity=0.521 Sum_probs=24.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
+.+++|.|||||||||+|+.||+.++.
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 468999999999999999999999975
No 86
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.06 E-value=0.00015 Score=70.83 Aligned_cols=28 Identities=36% Similarity=0.503 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
++.+++|+|||||||||+|+.||+.++.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 3578999999999999999999999853
No 87
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.02 E-value=9.4e-05 Score=74.28 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
|..++|.|||||||||+|+.||+.++.+++
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 568999999999999999999999976554
No 88
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.97 E-value=0.00015 Score=72.65 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=26.6
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
|-.++|.|||||||||+|+.||+.++.+++
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 467999999999999999999999987553
No 89
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.97 E-value=0.00018 Score=69.64 Aligned_cols=28 Identities=36% Similarity=0.593 Sum_probs=25.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
+-+++.|||||||||+|+.|++.++..+
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~ 30 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSA 30 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCE
Confidence 4689999999999999999999997653
No 90
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.96 E-value=0.00015 Score=70.19 Aligned_cols=27 Identities=37% Similarity=0.644 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
.-++++|||||||||+|+.||+.++..
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~ 29 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNS 29 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 468999999999999999999999654
No 91
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.95 E-value=0.0001 Score=71.98 Aligned_cols=27 Identities=33% Similarity=0.373 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
..++|+|+|||||||+|++||+.|+..
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhhc
Confidence 578899999999999999999999543
No 92
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.93 E-value=0.00024 Score=71.26 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=27.4
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEec
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 849 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~ 849 (1165)
|..|+++|||||||||+|+.||+.+|.+ .++.
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~--~i~~ 37 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWV--HLSA 37 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCE--EEEH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCc--eEch
Confidence 5788999999999999999999999864 4444
No 93
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.91 E-value=0.00021 Score=71.78 Aligned_cols=33 Identities=18% Similarity=0.386 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEec
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~ 251 (1165)
+|..+++.|||||||||+|+.||+.+|. .++++
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~g~--~~i~~ 37 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDFGW--VHLSA 37 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHCC--EEEEH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHCC--ceEch
Confidence 4578999999999999999999999975 45554
No 94
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.91 E-value=0.00031 Score=70.66 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=26.2
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
.+.++|.|||||||||+|+.||+.+|.+++
T Consensus 8 ~~iI~i~GppGSGKsT~a~~La~~~g~~~i 37 (196)
T d1ukza_ 8 VSVIFVLGGPGAGKGTQCEKLVKDYSFVHL 37 (196)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHSSCEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence 467889999999999999999999976443
No 95
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.90 E-value=0.0002 Score=70.73 Aligned_cols=28 Identities=29% Similarity=0.566 Sum_probs=25.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
++++.|||||||||+|+.||+.+|.+++
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i 29 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI 29 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcee
Confidence 5889999999999999999999976544
No 96
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.88 E-value=0.00029 Score=69.55 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=25.6
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIK 846 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~ 846 (1165)
++++.|||||||||+|+.||+.++.+++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceec
Confidence 47899999999999999999999876553
No 97
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.83 E-value=0.00015 Score=70.67 Aligned_cols=27 Identities=33% Similarity=0.356 Sum_probs=23.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
+..|+|+|+|||||||+|++||+.++.
T Consensus 6 g~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 6 GFTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 356889999999999999999999854
No 98
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.82 E-value=0.00034 Score=70.40 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
...++|.|||||||||+|+.||+.+|. .++++.
T Consensus 8 ~~iI~i~GppGSGKsT~a~~La~~~g~--~~is~g 40 (196)
T d1ukza_ 8 VSVIFVLGGPGAGKGTQCEKLVKDYSF--VHLSAG 40 (196)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHSSC--EEEEHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC--eEEehh
Confidence 468999999999999999999999965 445543
No 99
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.82 E-value=0.00031 Score=70.36 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
...++|.|||||||||+|+.||+.+|. .+++..
T Consensus 3 ~~riil~G~pGSGKsT~a~~La~~~g~--~~i~~g 35 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPKLAKNFCV--CHLATG 35 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHTC--EEEEHH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHhCC--eEEeHH
Confidence 357889999999999999999999964 445543
No 100
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.79 E-value=0.00037 Score=69.76 Aligned_cols=29 Identities=31% Similarity=0.447 Sum_probs=25.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
..++|.|||||||||+|+.||+.+|.+++
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i 32 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHL 32 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence 46788999999999999999999986443
No 101
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.78 E-value=0.00028 Score=70.07 Aligned_cols=28 Identities=39% Similarity=0.665 Sum_probs=24.7
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
+++|.|||||||||+|+.||+.++..++
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i 29 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQI 29 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceE
Confidence 6889999999999999999999965544
No 102
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.77 E-value=0.00014 Score=72.43 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
+..++|+|+|||||||+|+.||+.++.++.
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 367889999999999999999999965443
No 103
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.74 E-value=0.00043 Score=69.64 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=28.2
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se 851 (1165)
++.++|.|||||||||+|+.||+.+|. ..+++.+
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~--~~is~g~ 41 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGY--THLSTGD 41 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCC--EEEEHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC--eeEeccH
Confidence 467899999999999999999999976 4455543
No 104
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.73 E-value=0.00044 Score=68.60 Aligned_cols=28 Identities=39% Similarity=0.665 Sum_probs=25.0
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
+++|.|||||||||+|+.||+.++..++
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i 29 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQI 29 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceE
Confidence 5789999999999999999999986544
No 105
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.71 E-value=0.00047 Score=68.55 Aligned_cols=29 Identities=34% Similarity=0.600 Sum_probs=25.5
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIK 846 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~ 846 (1165)
.++|.|||||||||+|+.||+.++.+++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceee
Confidence 47899999999999999999999876553
No 106
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.69 E-value=0.00046 Score=68.60 Aligned_cols=28 Identities=36% Similarity=0.621 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
.++|.|||||||||+|+.||+.++.+++
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~i 29 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHI 29 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcee
Confidence 5789999999999999999999976544
No 107
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.67 E-value=0.00042 Score=69.73 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 253 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~ 253 (1165)
+..++|.|||||||||+|+.||+.+|. .++++.+
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~--~~is~g~ 41 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGY--THLSTGD 41 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCC--EEEEHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC--eeEeccH
Confidence 468999999999999999999999864 5556543
No 108
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.66 E-value=0.00046 Score=69.11 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=25.4
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
|..+++.||||+||||.|+.||+.++..+
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~~~ 29 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTH 29 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCce
Confidence 35789999999999999999999997543
No 109
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.65 E-value=0.00057 Score=66.50 Aligned_cols=24 Identities=29% Similarity=0.747 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
++++++||||||||+|++++++.+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 589999999999999999999998
No 110
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.64 E-value=0.00052 Score=69.16 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=25.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
-.++|+|||||||||+|+.||+.++.+++
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~i 35 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHL 35 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEE
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHCCeEE
Confidence 57889999999999999999999986443
No 111
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.64 E-value=0.00056 Score=67.70 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=24.9
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
.++|.|||||||||+|+.||+.++.+++
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i 29 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQI 29 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcee
Confidence 4788999999999999999999987554
No 112
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.63 E-value=0.00038 Score=70.19 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 253 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~ 253 (1165)
..++|.|||||||||+|+.||+.++. .+++..+
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~--~~is~gd 39 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFEL--KHLSSGD 39 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCC--EEEEHHH
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHCC--eEEcHHH
Confidence 68999999999999999999999974 4455533
No 113
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.00043 Score=69.28 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCceEEec
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~ 251 (1165)
|..+++.||||+||||+|+.||+.+|. .+++.
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~--~~i~~ 32 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGY--THLSA 32 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCC--EEEEH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC--ceEcH
Confidence 357899999999999999999999964 44554
No 114
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.62 E-value=0.00037 Score=69.32 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 253 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~ 253 (1165)
-.++|.|||||||||+|+.||+.++.+ .+++.+
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~--~i~~~d 35 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAA--HLATGD 35 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCE--EEEHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCc--eEeccc
Confidence 468899999999999999999999654 555543
No 115
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.00022 Score=70.88 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=24.7
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
+..++|+|+|||||||+|+.||+.++.++
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~~ 47 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHG 47 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 35778999999999999999999986443
No 116
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.60 E-value=0.00053 Score=67.83 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=24.4
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
+++|.|||||||||+|+.||+.++..++
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i 29 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQI 29 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcee
Confidence 5789999999999999999999965433
No 117
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.59 E-value=0.00057 Score=67.90 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=26.4
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEEEecCC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se 851 (1165)
.++|.|||||||||+|+.||+.++.+ .+++.+
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~--~i~~~d 35 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAA--HLATGD 35 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCE--EEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCc--eEeccc
Confidence 57888999999999999999999865 444443
No 118
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.56 E-value=0.00072 Score=65.69 Aligned_cols=24 Identities=29% Similarity=0.747 Sum_probs=22.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
++++++||||||||++++.++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999998
No 119
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=96.43 E-value=0.00067 Score=66.40 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=26.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
+++++||||||||||+++++..++.....+.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~ 32 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFW 32 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEE
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceEE
Confidence 6899999999999999999999965544333
No 120
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.42 E-value=0.00086 Score=67.92 Aligned_cols=29 Identities=24% Similarity=0.448 Sum_probs=25.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
+-+.+.|||||||+|+|+.||+.+|.+++
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~gl~~i 32 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEALQWHLL 32 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 46777899999999999999999987654
No 121
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.37 E-value=0.00055 Score=68.02 Aligned_cols=30 Identities=17% Similarity=0.310 Sum_probs=25.4
Q ss_pred CCceEEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 815 TPKNILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 815 ~~~~iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
.|.-++|+|+|||||||+|+.++...+..+
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~ 42 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVH 42 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCCEE
Confidence 367899999999999999999988776533
No 122
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.32 E-value=0.00057 Score=67.93 Aligned_cols=33 Identities=15% Similarity=0.373 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEec
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~ 251 (1165)
.|.-++++|+|||||||+|+.++...+. .+++.
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~--~~i~~ 45 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGY--VHVNR 45 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTC--EEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCC--EEEch
Confidence 4679999999999999999999877653 44443
No 123
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=96.31 E-value=0.00099 Score=65.14 Aligned_cols=30 Identities=27% Similarity=0.520 Sum_probs=25.6
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEEE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKI 847 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l 847 (1165)
++++.||||||||||+++++..+..+...+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~ 31 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGF 31 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEE
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceE
Confidence 489999999999999999999997655433
No 124
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.24 E-value=0.0011 Score=66.96 Aligned_cols=28 Identities=25% Similarity=0.431 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
+-+.+.|||||||||+|+.||+.+|.++
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~gl~~ 31 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEALQWHL 31 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcE
Confidence 4778889999999999999999996544
No 125
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.21 E-value=0.0011 Score=63.10 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
.-++++||||+||||+|+.|++... .+..++..
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d 35 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRD 35 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechH
Confidence 4688999999999999999877652 24444443
No 126
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.17 E-value=0.0022 Score=65.53 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh----CCCceEEecccccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS----NAPFIKIEATKFTE 256 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l----~~~~i~ld~s~~~~ 256 (1165)
+..++|+|.||+||||+|+.|++.+ +.+.+.+|+-.+..
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 4689999999999999999999766 67888898877644
No 127
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.16 E-value=0.0014 Score=66.71 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=23.2
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
.+.+-|||||||||+|+.||+.++.++
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~ 31 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTY 31 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcE
Confidence 456779999999999999999996653
No 128
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.15 E-value=0.0013 Score=66.89 Aligned_cols=28 Identities=29% Similarity=0.490 Sum_probs=24.1
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
.+.+-|||||||||+|+.||+.++.+++
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~i 32 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTYL 32 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 3556699999999999999999987654
No 129
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.13 E-value=0.0014 Score=62.40 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=24.7
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEecC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 850 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~s 850 (1165)
+-++++||||+||||+|+.|++... .+..++..
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d 35 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRD 35 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechH
Confidence 4588999999999999999877653 24444443
No 130
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.07 E-value=0.0026 Score=64.98 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=33.0
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc----CCCeEEEecCCccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS----NAPFIKIEATKFTE 854 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l----~~~fi~l~~se~~~ 854 (1165)
+..++|+|.||+||||+|+.|++.+ +.+++.+|+..+..
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 4678999999999999999999765 67889999877554
No 131
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.99 E-value=0.0012 Score=66.05 Aligned_cols=26 Identities=38% Similarity=0.640 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
|.-++++|+|||||||+|++||+.++
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~ 27 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLN 27 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999884
No 132
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.80 E-value=0.0025 Score=61.95 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
+-+++.|||||||||+++.|++.++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999843
No 133
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.74 E-value=0.0033 Score=62.77 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=27.5
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcC---CCeEEEecC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSN---APFIKIEAT 850 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~---~~fi~l~~s 850 (1165)
|--++|+|+||+||||+|+.||+.++ .+...++..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEccc
Confidence 45689999999999999999999884 444455543
No 134
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.56 E-value=0.0027 Score=61.77 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
+-+++.|||||||||+++.|++.++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 46889999999999999999998843
No 135
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.54 E-value=0.0031 Score=60.65 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
+.+.|+|+||||||||++.|++.+
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l 26 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPAL 26 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHH
Confidence 478999999999999999999987
No 136
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.43 E-value=0.003 Score=61.74 Aligned_cols=28 Identities=21% Similarity=0.354 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
-++|.|+|||||||+++.||+.++...+
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~ 30 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGI 30 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999965443
No 137
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.38 E-value=0.0037 Score=60.03 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=22.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+.+.++|+||||||||++.|++.+
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l 26 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPAL 26 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999887
No 138
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La) {Escherichia coli [TaxId: 562]}
Probab=95.16 E-value=0.024 Score=50.40 Aligned_cols=86 Identities=15% Similarity=0.094 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHhhhhHhHHHHHHHHHhhcCCeeEeCHHHHHHHHHHHHhccccCCccCcchhHHHHHHHHHHhhcccC-C
Q psy2392 505 SLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSN-N 583 (1165)
Q Consensus 505 ~L~~~~l~~Il~~~~~~l~~~~~~ll~~~~i~l~~~~~a~~~la~~a~~~~~~~~~~GAR~l~~~ie~~l~~~~~~~~-~ 583 (1165)
.++.+|-.+|.+ +.|+..+........-++.|++++++.|++.... ..|.|.|.+.|++++..+....- +
T Consensus 2 GYt~~EK~~Iak---~yLiPk~l~~~gl~~~~i~i~~~~l~~iI~~Ytr------EaGVR~Ler~i~~I~Rk~a~~~~~~ 72 (94)
T d1qzma_ 2 GYTEDEKLNIAK---RHLLPKQIERNALKKGELTVDDSAIIGIIRYYTR------EAGVRGLEREISKLCRKAVKQLLLD 72 (94)
T ss_dssp CCCHHHHHHHHH---HTHHHHHHHHTTCCTTTEEECHHHHHHHHHHHCC------CSSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHH---HHhHHHHHHHhccccccccchHHHHHHHHHHHcc------HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 467788888886 6666655444444444699999999999985543 68999999999999888766532 1
Q ss_pred ---CeeEEccccccccccc
Q psy2392 584 ---ISLLVDADYVNSRLGD 599 (1165)
Q Consensus 584 ---~~~~i~~~~v~~~~~~ 599 (1165)
..+.||.+.+.+.|+.
T Consensus 73 ~~~~~~~i~~~~l~~~LG~ 91 (94)
T d1qzma_ 73 KSLKHIEINGDNLHDYLGV 91 (94)
T ss_dssp TTCCCEEECTTTTHHHHCS
T ss_pred CCCCCeeeCHHHHHHHcCC
Confidence 1378999999888764
No 139
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.09 E-value=0.004 Score=60.79 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=22.9
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAP 843 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~ 843 (1165)
-+++.|+|||||||+++.|++.++..
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999999999543
No 140
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.88 E-value=0.018 Score=56.39 Aligned_cols=27 Identities=22% Similarity=0.238 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
--+-+.||+||||||+|+.|++.++..
T Consensus 23 ~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 23 LVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 356699999999999999999988543
No 141
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.57 E-value=0.028 Score=54.84 Aligned_cols=26 Identities=23% Similarity=0.249 Sum_probs=22.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
--+-+.||+||||||+|+.|++.++.
T Consensus 23 ~iIgI~G~~GSGKSTla~~L~~~l~~ 48 (198)
T d1rz3a_ 23 LVLGIDGLSRSGKTTLANQLSQTLRE 48 (198)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhcc
Confidence 45668999999999999999998753
No 142
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=94.52 E-value=0.015 Score=59.55 Aligned_cols=38 Identities=29% Similarity=0.425 Sum_probs=27.1
Q ss_pred cCCcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 216 ITPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 216 ~~~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
.+|..++|+||||+||||.+--||..+ +....-+.+-.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt 49 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADT 49 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecc
Confidence 356889999999999999877777666 44444444433
No 143
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.43 E-value=0.015 Score=59.36 Aligned_cols=38 Identities=26% Similarity=0.325 Sum_probs=23.2
Q ss_pred cCCcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 216 ITPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 216 ~~~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
..|..++|+||||+||||.+--||..+ +....-+.+-.
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt 50 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADV 50 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeec
Confidence 346889999999999999877777666 44444444433
No 144
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=94.38 E-value=0.019 Score=58.67 Aligned_cols=38 Identities=32% Similarity=0.510 Sum_probs=26.5
Q ss_pred CCceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCc
Q psy2392 815 TPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 852 (1165)
Q Consensus 815 ~~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~ 852 (1165)
.|..++|+||||+||||.+-.||..+ +.....+.+-.|
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~ 50 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 50 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeeccc
Confidence 46788999999999999776677665 444444444333
No 145
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.35 E-value=0.011 Score=59.04 Aligned_cols=26 Identities=27% Similarity=0.681 Sum_probs=23.3
Q ss_pred EEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 221 ILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 221 ~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
++|.||||||||++++.|++.++..|
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCce
Confidence 78999999999999999999986554
No 146
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.34 E-value=0.01 Score=59.03 Aligned_cols=27 Identities=30% Similarity=0.604 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
-++|+||||||||+|++.|++.....|
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 378999999999999999999985443
No 147
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.34 E-value=0.021 Score=58.06 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEecccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 254 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~~ 254 (1165)
+..++|+||||+||||.+-.||..+ +....-+++-.|
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 4568899999999999888888777 555555555443
No 148
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.34 E-value=0.011 Score=58.61 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=23.4
Q ss_pred EEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 819 ILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 819 iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
++|+||||+|||+|++.|++.....|
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCcce
Confidence 89999999999999999999986544
No 149
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.24 E-value=0.014 Score=58.30 Aligned_cols=26 Identities=27% Similarity=0.681 Sum_probs=23.4
Q ss_pred EEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 819 ILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 819 iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
++|+||||||||++++.|++.++.-|
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCce
Confidence 78999999999999999999987554
No 150
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=94.14 E-value=0.022 Score=57.91 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=26.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~ 852 (1165)
++.++|+||||+||||.+-.||..+ +.....+.+-.|
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 45 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 45 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccc
Confidence 5789999999999999877777766 444444444443
No 151
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.11 E-value=0.022 Score=58.12 Aligned_cols=37 Identities=27% Similarity=0.353 Sum_probs=22.3
Q ss_pred CCceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCC
Q psy2392 815 TPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 851 (1165)
Q Consensus 815 ~~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se 851 (1165)
.|..++|+||||+||||.+-.||..+ +...-.+.+-.
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt 50 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADV 50 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeec
Confidence 36788999999999999876677665 44444444433
No 152
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.05 E-value=0.031 Score=56.85 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=27.3
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~ 852 (1165)
+..++|+||||+||||.+-.||..+ +.....+.+..|
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 4567889999999999887777766 555555555444
No 153
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=94.03 E-value=0.021 Score=58.12 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
++..++|+|||||||||.+--||..+ +....-+.+-.
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt 44 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDT 44 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 35789999999999999877778776 44444444433
No 154
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.88 E-value=0.014 Score=57.50 Aligned_cols=25 Identities=28% Similarity=0.569 Sum_probs=22.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
.-++|.||||+||||+++.|.+.+.
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4688999999999999999998874
No 155
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.77 E-value=0.014 Score=57.43 Aligned_cols=25 Identities=28% Similarity=0.569 Sum_probs=22.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+-|+|.||||+||||+++.|.+.+.
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4588999999999999999998875
No 156
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=93.59 E-value=0.026 Score=57.54 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEecccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 254 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~~ 254 (1165)
|..++|+||||+||||.+--||..+ +....-+.+-.|
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 48 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTF 48 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 5789999999999999877778766 455455555443
No 157
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=93.43 E-value=0.032 Score=56.91 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=26.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~ 852 (1165)
|..++|+||||+||||.+-.||..+ +.....+.+..|
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 48 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTF 48 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 5778899999999999777777666 444455555443
No 158
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.35 E-value=0.043 Score=55.48 Aligned_cols=25 Identities=24% Similarity=0.450 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
.-++|+||+|+|||+|.+.|.+...
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4688999999999999999999875
No 159
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.34 E-value=0.018 Score=57.89 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
|--+-+.||+||||||+|+.|++.++.+
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhchh
Confidence 3467799999999999999999999643
No 160
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.17 E-value=0.024 Score=56.96 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=24.1
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAP 843 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~ 843 (1165)
|--+-+.||+||||||+|+.|++.++.+
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhchh
Confidence 4567789999999999999999998643
No 161
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=92.71 E-value=0.063 Score=56.59 Aligned_cols=48 Identities=19% Similarity=0.117 Sum_probs=36.9
Q ss_pred cccchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHc
Q psy2392 782 YVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 782 ~IvGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.++|.+.-++.|...+... .+. ....+.++|+.|+|||+||+.+.+..
T Consensus 21 ~~~gR~~~~~~i~~~L~~~------~~~-----~~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEM------CDL-----DSFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHH------TTS-----SSEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred ceeCcHHHHHHHHHHHHhc------cCC-----CceEEEEECCCCCCHHHHHHHHHHhh
Confidence 5779888888888887642 010 13567899999999999999998874
No 162
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=92.68 E-value=0.052 Score=57.26 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=37.0
Q ss_pred cEecchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 184 YVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 184 ~IiGQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.++|.+.-++.|...+... .+ . ....+.++|+.|+|||+||+.+.+..
T Consensus 21 ~~~gR~~~~~~i~~~L~~~------~~--~---~~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEM------CD--L---DSFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHH------TT--S---SSEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred ceeCcHHHHHHHHHHHHhc------cC--C---CceEEEEECCCCCCHHHHHHHHHHhh
Confidence 6779888888888887542 01 0 12578899999999999999998774
No 163
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=92.60 E-value=0.042 Score=55.86 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEec
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEA 251 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~ 251 (1165)
....+++||||||||++|..+|... +.+...++.
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~ 62 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENACANKERAILFAY 62 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeec
Confidence 3689999999999999999999876 444555544
No 164
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=92.29 E-value=0.043 Score=59.44 Aligned_cols=39 Identities=26% Similarity=0.386 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 189 NRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 189 ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+.+...+..++..+ .+++++||||+||||+.++|.....
T Consensus 153 ~~~~~~l~~~v~~~----------------~nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 153 EQAISAIKDGIAIG----------------KNVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp HHHHHHHHHHHHHT----------------CCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHhC----------------CCEEEEeeccccchHHHHHHhhhcc
Confidence 45555666666543 7899999999999999999998884
No 165
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.97 E-value=0.066 Score=54.36 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=26.1
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEec
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEA 849 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~ 849 (1165)
...++++||||||||++|..+|... +.+...++.
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~ 62 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENACANKERAILFAY 62 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeec
Confidence 3678999999999999999888776 444444443
No 166
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.88 E-value=0.047 Score=53.85 Aligned_cols=28 Identities=29% Similarity=0.591 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
+-++|+||+|+|||+|.+.|.+.....|
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcCe
Confidence 5689999999999999999998875444
No 167
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.75 E-value=0.056 Score=53.24 Aligned_cols=28 Identities=29% Similarity=0.591 Sum_probs=23.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPF 844 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~f 844 (1165)
+-++|+||+|+|||+|++.|.+.....|
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcCe
Confidence 4589999999999999999998875444
No 168
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.75 E-value=0.045 Score=53.40 Aligned_cols=24 Identities=33% Similarity=0.342 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..++++||||+|||++|-.+|...
T Consensus 24 ~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 24 SITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHH
Confidence 689999999999999999998776
No 169
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=91.70 E-value=0.042 Score=51.55 Aligned_cols=22 Identities=41% Similarity=0.510 Sum_probs=19.6
Q ss_pred EEEEEcCCCCCchHHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
.++++|+||||||+|.+.+...
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 5789999999999999998754
No 170
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.70 E-value=0.045 Score=52.66 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHh
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
-+-++|++|||||||+..|+..|
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L 25 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAA 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 46699999999999999999988
No 171
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=91.52 E-value=0.056 Score=58.55 Aligned_cols=25 Identities=32% Similarity=0.565 Sum_probs=23.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+++++.||+|+||||+.+++.....
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CCEEEEeeccccchHHHHHHhhhcc
Confidence 7899999999999999999998874
No 172
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.33 E-value=0.05 Score=50.86 Aligned_cols=23 Identities=26% Similarity=0.419 Sum_probs=20.2
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
+.++|+|+||||||+|...+...
T Consensus 1 ~KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 1 GKLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 46899999999999999988763
No 173
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=91.16 E-value=0.17 Score=54.20 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=29.6
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcC-----CCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSN-----APFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~-----~~fi~l~~se~ 852 (1165)
|--+.+.||+|+||||+|+.|+..+. .....+.+-.|
T Consensus 80 P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 80 PYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 56788899999999999999999984 33456666655
No 174
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.01 E-value=0.058 Score=51.88 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=20.7
Q ss_pred eEEEEccCCCChhHHHHHHHHHc
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.+-++|++|+|||||+..|++.+
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L 25 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAA 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 46689999999999999999887
No 175
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=90.99 E-value=0.057 Score=53.11 Aligned_cols=29 Identities=31% Similarity=0.409 Sum_probs=23.2
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
|--+-++|++||||||+|+.+. .+|.+.+
T Consensus 3 p~IIgitG~~gSGKstva~~l~-~~g~~~~ 31 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALLR-SWGYPVL 31 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH-HTTCCEE
T ss_pred CEEEEEECCCCCCHHHHHHHHH-HCCCeEE
Confidence 4567789999999999999984 5776544
No 176
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.92 E-value=0.083 Score=53.26 Aligned_cols=25 Identities=24% Similarity=0.450 Sum_probs=22.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
.-++|+||+|+|||+|.+.|.+...
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4578999999999999999999875
No 177
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.88 E-value=0.044 Score=55.18 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
..++++||||||||++|..++..
T Consensus 35 ~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 35 SITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEEEEEESTTSSHHHHHHHHTTT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 68999999999999999988754
No 178
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.87 E-value=0.062 Score=52.33 Aligned_cols=24 Identities=33% Similarity=0.342 Sum_probs=21.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
..++++||||+|||++|-.+|...
T Consensus 24 ~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 24 SITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHH
Confidence 578999999999999999888765
No 179
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=90.77 E-value=0.14 Score=51.50 Aligned_cols=27 Identities=15% Similarity=0.373 Sum_probs=24.3
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
...++|+|||+||||++|.+|.+.++-
T Consensus 53 kn~i~~~GP~~TGKS~f~~sl~~~l~G 79 (205)
T d1tuea_ 53 KNCLVFCGPANTGKSYFGMSFIHFIQG 79 (205)
T ss_dssp CSEEEEESCGGGCHHHHHHHHHHHHTC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHhCC
Confidence 368899999999999999999999864
No 180
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=90.74 E-value=0.061 Score=50.36 Aligned_cols=22 Identities=41% Similarity=0.510 Sum_probs=19.3
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.++++|+||||||+|.+.+...
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4789999999999999988754
No 181
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.62 E-value=0.05 Score=54.72 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
..++++||||||||+++-.++..
T Consensus 35 ~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 35 SITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEEEEEESTTSSHHHHHHHHTTT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 57899999999999999887644
No 182
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=90.59 E-value=0.061 Score=52.89 Aligned_cols=29 Identities=31% Similarity=0.409 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
|--+-++|++||||||+|+.|. .+|.+++
T Consensus 3 p~IIgitG~~gSGKstva~~l~-~~g~~~~ 31 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALLR-SWGYPVL 31 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH-HTTCCEE
T ss_pred CEEEEEECCCCCCHHHHHHHHH-HCCCeEE
Confidence 4567799999999999999995 4665443
No 183
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.26 E-value=0.073 Score=49.66 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=19.5
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.++|+|+||||||+|...+.+.
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999987763
No 184
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.14 E-value=0.07 Score=54.18 Aligned_cols=24 Identities=33% Similarity=0.440 Sum_probs=21.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..++++||||||||++|-.+|...
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHh
Confidence 588999999999999999998765
No 185
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.88 E-value=0.084 Score=53.40 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=21.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..++++||||||||++|..+|...
T Consensus 38 ~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 38 AITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp EEEEEECCTTCTHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Confidence 588999999999999999998754
No 186
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=89.85 E-value=0.079 Score=49.87 Aligned_cols=22 Identities=45% Similarity=0.655 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++|+|+||||||+|.+++..
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~ 27 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQV 27 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHhC
Confidence 4789999999999999998764
No 187
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=89.72 E-value=0.12 Score=55.51 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhC-----CCceEEecccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSN-----APFIKIEATKF 254 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~-----~~~i~ld~s~~ 254 (1165)
|--+-+.||+||||||+|+.|+..+. .....+.+-.|
T Consensus 80 P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 80 PYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 46888999999999999999999984 33455666655
No 188
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.55 E-value=0.088 Score=53.37 Aligned_cols=24 Identities=33% Similarity=0.440 Sum_probs=21.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.-++++||||||||++|-.++...
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHh
Confidence 578999999999999999888765
No 189
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=89.51 E-value=0.071 Score=51.08 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=19.7
Q ss_pred CcEEEEEcCCCCCchHHHHHHH
Q psy2392 218 PKNILMIGPTGVGKTEIARRLA 239 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA 239 (1165)
...++|+|+||||||+|..++.
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~ 34 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLK 34 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHh
Confidence 4789999999999999998874
No 190
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=89.48 E-value=0.049 Score=53.64 Aligned_cols=27 Identities=33% Similarity=0.524 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
|--+.+.|+.||||||+++.|++.++.
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 457899999999999999999999854
No 191
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=89.41 E-value=0.078 Score=53.38 Aligned_cols=27 Identities=15% Similarity=0.373 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
...++|+|||+||||++|.+|.+.++.
T Consensus 53 kn~i~~~GP~~TGKS~f~~sl~~~l~G 79 (205)
T d1tuea_ 53 KNCLVFCGPANTGKSYFGMSFIHFIQG 79 (205)
T ss_dssp CSEEEEESCGGGCHHHHHHHHHHHHTC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHhCC
Confidence 478999999999999999999999954
No 192
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.33 E-value=0.079 Score=54.64 Aligned_cols=36 Identities=25% Similarity=0.540 Sum_probs=27.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCe--EEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPF--IKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~f--i~l~~se~ 852 (1165)
..+.|.||+|||||||.++++......- +.++.-++
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i 64 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRM 64 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCC
T ss_pred CEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEC
Confidence 5788999999999999999998874322 45555443
No 193
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.26 E-value=0.079 Score=54.57 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
..+.+.||+|||||||.++++...... -+.++..++
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i 69 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKT 69 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEc
Confidence 588999999999999999999877321 245554443
No 194
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=89.25 E-value=0.3 Score=47.15 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=24.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP 843 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~ 843 (1165)
..++|.|+=|+|||+++|.+++.++.+
T Consensus 34 ~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred eEEEEecCCCccHHHHHHHHHhhcccc
Confidence 358889999999999999999999763
No 195
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.21 E-value=0.07 Score=54.97 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=26.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+.+.||+|||||||.++++...... -+.++.-++
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i 69 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKT 69 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEc
Confidence 578899999999999999999877422 255555443
No 196
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.16 E-value=0.34 Score=51.21 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=27.5
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc------CCCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS------NAPFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l------~~~fi~l~~se~ 852 (1165)
|--+-+.||+||||||++..|...+ ......++.-+|
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 3456678999999999999887665 234556676666
No 197
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.11 E-value=0.081 Score=54.55 Aligned_cols=25 Identities=32% Similarity=0.728 Sum_probs=22.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
.-+.+.||+|||||||.++++..+.
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~~ 51 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLET 51 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcCCC
Confidence 5789999999999999999999873
No 198
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=89.09 E-value=0.084 Score=54.70 Aligned_cols=25 Identities=36% Similarity=0.719 Sum_probs=22.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+.+.||+||||||+.++++....
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcCCC
Confidence 5788999999999999999998874
No 199
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=89.08 E-value=0.082 Score=54.79 Aligned_cols=25 Identities=36% Similarity=0.719 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
..+-+.||+||||||+.++++..+.
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcCCC
Confidence 5889999999999999999998873
No 200
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=89.06 E-value=0.17 Score=55.42 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=17.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
+-.+++||||||||++...+..
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~l~ 185 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKLLA 185 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHHHH
Confidence 5789999999999998755433
No 201
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.04 E-value=0.15 Score=50.71 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHH-h---CCCceEEec
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKL-S---NAPFIKIEA 251 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~-l---~~~~i~ld~ 251 (1165)
...++++||||+|||++|..++.. + +.....++.
T Consensus 26 G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~ 63 (242)
T d1tf7a1 26 GRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTF 63 (242)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEES
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccc
Confidence 368999999999999999776543 2 344444444
No 202
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.02 E-value=0.099 Score=52.85 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=21.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
..++++||||||||++|..++...
T Consensus 38 ~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 38 AITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp EEEEEECCTTCTHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Confidence 578899999999999999988654
No 203
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.00 E-value=0.12 Score=51.97 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHh---CCCceEE
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLS---NAPFIKI 249 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~l 249 (1165)
=+.|.||.|+||||+++.|++.+ |.+.+.+
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~ 37 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 37 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 46677999999999999999988 4454444
No 204
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.98 E-value=0.086 Score=54.58 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=26.1
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
.+.|.||+|||||||.++++..+... -+.+++.++
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i 62 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADI 62 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEEC
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEEC
Confidence 45688999999999999999988422 255555443
No 205
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=88.97 E-value=0.13 Score=51.81 Aligned_cols=23 Identities=22% Similarity=0.549 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHh
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.+++.||+|+|||||.+.|.+.+
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHHH
Confidence 37899999999999999999877
No 206
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.96 E-value=0.084 Score=54.66 Aligned_cols=24 Identities=29% Similarity=0.585 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.-+.|.||+|||||||.++|+..+
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEEECCCCChHHHHHHHHHcCC
Confidence 356688999999999999999988
No 207
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=88.73 E-value=0.11 Score=48.84 Aligned_cols=22 Identities=45% Similarity=0.655 Sum_probs=19.2
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++|+|+||||||+|.+++..
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~ 27 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQV 27 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHhC
Confidence 4589999999999999998764
No 208
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=88.71 E-value=0.068 Score=52.56 Aligned_cols=27 Identities=33% Similarity=0.524 Sum_probs=24.2
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
|--|.+-|+.||||||+++.|++.++.
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 457888999999999999999999865
No 209
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=88.69 E-value=0.096 Score=49.88 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-+++|+|+||||||+|.+.+..
T Consensus 3 ~ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 3 LRLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHcC
Confidence 4799999999999999998753
No 210
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=88.54 E-value=0.074 Score=55.55 Aligned_cols=25 Identities=28% Similarity=0.639 Sum_probs=23.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
..+.++||+|||||||+++|+..+.
T Consensus 42 e~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CEEEEECCCCChHHHHHHHHhcccC
Confidence 6899999999999999999998873
No 211
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.36 E-value=0.21 Score=49.24 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=25.5
Q ss_pred EEEEccCCCChhHHHHHHHHHc---CCCeEEEecC
Q psy2392 819 ILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 850 (1165)
Q Consensus 819 iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~s 850 (1165)
|.+.|+.||||||+++.|++.+ |.+.+.+.-+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 6778999999999999999987 5555555433
No 212
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=88.36 E-value=0.065 Score=53.97 Aligned_cols=24 Identities=25% Similarity=0.566 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..+.+.||.|||||||.++++..+
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCChHHHHHHHHhccc
Confidence 567899999999999999999887
No 213
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.34 E-value=0.18 Score=50.67 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=24.8
Q ss_pred eEEEEccCCCChhHHHHHHHHHc---CCCeEEEe
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLS---NAPFIKIE 848 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~ 848 (1165)
-|.|.||.|+||||+++.|++.+ +.+.+.+.
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 36667999999999999999987 55555544
No 214
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.26 E-value=0.1 Score=53.97 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=26.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCe--EEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPF--IKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~f--i~l~~se 851 (1165)
..+-+.||+|||||||.++++..+...- +.++.-+
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~ 69 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRD 69 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEE
T ss_pred CEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEccee
Confidence 4788999999999999999999884322 4455433
No 215
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.20 E-value=0.19 Score=49.62 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=24.3
Q ss_pred EEEEcCCCCCchHHHHHHHHHh---CCCceEEe
Q psy2392 221 ILMIGPTGVGKTEIARRLAKLS---NAPFIKIE 250 (1165)
Q Consensus 221 ~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld 250 (1165)
+.+.|+.||||||+++.|++.+ |.+.+.+.
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~ 35 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLA 35 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEe
Confidence 6788999999999999999988 44554443
No 216
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.16 E-value=0.1 Score=53.99 Aligned_cols=25 Identities=36% Similarity=0.710 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
..+-+.||+|||||||.++++..+.
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHHcCCC
Confidence 5789999999999999999999883
No 217
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.13 E-value=0.12 Score=51.20 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=20.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
++|+++|+||||||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999888763
No 218
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=88.06 E-value=0.084 Score=54.69 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
.-+-+.||+|||||||.++++....
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHcCCcc
Confidence 5789999999999999999998773
No 219
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=88.05 E-value=0.16 Score=53.93 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=26.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh---CCCceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~~ 254 (1165)
.-+-++|++|+||||++++|++.+ +.....+.+-+|
T Consensus 5 pIIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 5 PIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp CEEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 478999999999999999999988 455556766665
No 220
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.00 E-value=0.13 Score=49.16 Aligned_cols=21 Identities=29% Similarity=0.657 Sum_probs=19.0
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++|+|+||||||+|...+..
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999998764
No 221
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.98 E-value=0.12 Score=51.13 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
+++++.|+||||||+|.+++..
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~ 22 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLT 22 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHc
Confidence 4799999999999999998875
No 222
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=87.97 E-value=0.093 Score=54.35 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=22.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+-+.||+|||||||.++++....
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHcCCcc
Confidence 5678899999999999999998774
No 223
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=87.93 E-value=0.17 Score=48.87 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
..++|.|+=|+|||+++|.+++.+|..
T Consensus 34 ~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred eEEEEecCCCccHHHHHHHHHhhcccc
Confidence 468899999999999999999999753
No 224
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=87.93 E-value=0.074 Score=53.50 Aligned_cols=25 Identities=24% Similarity=0.554 Sum_probs=22.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+.+.||.|||||||.++++..+.
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhcccc
Confidence 4677999999999999999998773
No 225
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.89 E-value=0.13 Score=49.63 Aligned_cols=21 Identities=33% Similarity=0.637 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|+||||||+|...+..
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 689999999999999998764
No 226
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=87.88 E-value=0.092 Score=54.80 Aligned_cols=35 Identities=23% Similarity=0.516 Sum_probs=26.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se 851 (1165)
..+.++||+|||||||+++|+..+... -+.++.-+
T Consensus 42 e~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~ 78 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHD 78 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEE
T ss_pred CEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcc
Confidence 578999999999999999999887432 24555443
No 227
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=87.84 E-value=0.082 Score=54.38 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=27.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+.+.||+||||||+.++++...... -+.+++.++
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i 64 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDV 64 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEec
Confidence 468899999999999999999987433 244544443
No 228
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=87.82 E-value=0.13 Score=49.04 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++|.|++|||||+|..++..
T Consensus 3 ~ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 3 MELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHc
Confidence 3789999999999999998865
No 229
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=87.72 E-value=0.12 Score=49.25 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=19.1
Q ss_pred CceEEEEccCCCChhHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA 837 (1165)
...++|+|+||||||+|..++.
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~ 34 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLK 34 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHh
Confidence 3679999999999999987764
No 230
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=87.72 E-value=0.12 Score=49.52 Aligned_cols=22 Identities=23% Similarity=0.517 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.+++++|.||||||+|..++..
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 6899999999999999998764
No 231
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.70 E-value=0.13 Score=50.55 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=20.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
..++|+|+||||||+|..+|...
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 48999999999999999999764
No 232
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=87.67 E-value=0.088 Score=54.57 Aligned_cols=37 Identities=16% Similarity=0.368 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
...+.++||+|+|||||+++|+..+... -+.++..++
T Consensus 29 Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 67 (241)
T d2pmka1 29 GEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDL 67 (241)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEET
T ss_pred CCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEe
Confidence 3689999999999999999999987422 255554443
No 233
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=87.57 E-value=0.25 Score=49.01 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=19.1
Q ss_pred CceEEEEccCCCChhHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
...++++||||+|||++|..++.
T Consensus 26 G~~~~I~G~~G~GKT~la~~~~~ 48 (242)
T d1tf7a1 26 GRSTLVSGTSGTGKTLFSIQFLY 48 (242)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHH
Confidence 36789999999999999976553
No 234
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=87.55 E-value=0.082 Score=54.39 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
.-+.+.||+||||||+.++|+..+.
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHhcCcC
Confidence 5789999999999999999999873
No 235
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.46 E-value=0.14 Score=49.39 Aligned_cols=22 Identities=23% Similarity=0.623 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 5899999999999999998764
No 236
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=87.45 E-value=0.13 Score=51.43 Aligned_cols=24 Identities=29% Similarity=0.378 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.=+.|.|+.||||||+++.|++.+
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 346788999999999999999988
No 237
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.40 E-value=0.093 Score=54.70 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=27.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
..+.++||+|||||||+++|+..+... -+.+|..++
T Consensus 41 e~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i 78 (251)
T d1jj7a_ 41 EVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPL 78 (251)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEG
T ss_pred CEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEec
Confidence 588999999999999999999888422 245555443
No 238
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=87.38 E-value=0.092 Score=54.43 Aligned_cols=24 Identities=33% Similarity=0.517 Sum_probs=22.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..+.++||+|||||||+++|+..+
T Consensus 29 e~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHhh
Confidence 578899999999999999999988
No 239
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.32 E-value=0.15 Score=50.23 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=20.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
+.++|+|+||||||+|..++.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47999999999999999998765
No 240
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=87.27 E-value=0.14 Score=48.76 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=18.9
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.+++.|+||||||+|.+.+..
T Consensus 3 ~ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 3 LRLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHcC
Confidence 3689999999999999988743
No 241
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.24 E-value=0.25 Score=52.27 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh------CCCceEEecccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS------NAPFIKIEATKF 254 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l------~~~~i~ld~s~~ 254 (1165)
|--+-+.||+||||||++..|...+ ......+++-+|
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 3466689999999999999887776 234555666665
No 242
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=87.22 E-value=0.15 Score=51.41 Aligned_cols=22 Identities=23% Similarity=0.616 Sum_probs=20.2
Q ss_pred EEEEccCCCChhHHHHHHHHHc
Q psy2392 819 ILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 819 iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+++.||+|+|||||.+.+.+.+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 6889999999999999998776
No 243
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.21 E-value=0.11 Score=55.11 Aligned_cols=25 Identities=24% Similarity=0.326 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
..+.++||+|||||||.++|+..+.
T Consensus 63 e~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 63 EMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhCCCc
Confidence 6788999999999999999998873
No 244
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=87.15 E-value=0.12 Score=51.66 Aligned_cols=29 Identities=28% Similarity=0.394 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEE
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKI 249 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~l 249 (1165)
-+-++|++||||||+|+.+. .+|.+++..
T Consensus 4 iIgITG~igSGKStv~~~l~-~~G~~vida 32 (205)
T d1jjva_ 4 IVGLTGGIGSGKTTIANLFT-DLGVPLVDA 32 (205)
T ss_dssp EEEEECSTTSCHHHHHHHHH-TTTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHH-HCCCeEEEc
Confidence 35689999999999999886 467665543
No 245
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=87.10 E-value=0.15 Score=51.00 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.-++++||||+|||++|..+|..+
T Consensus 35 ~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 35 SVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 678999999999999999999776
No 246
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=86.98 E-value=0.16 Score=48.62 Aligned_cols=21 Identities=33% Similarity=0.612 Sum_probs=18.9
Q ss_pred CcEEEEEcCCCCCchHHHHHH
Q psy2392 218 PKNILMIGPTGVGKTEIARRL 238 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~l 238 (1165)
.-.++++|+||||||+|.+.+
T Consensus 16 ~~kI~vvG~~~vGKSsLi~~l 36 (176)
T d1fzqa_ 16 EVRILLLGLDNAGKTTLLKQL 36 (176)
T ss_dssp CEEEEEEESTTSSHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHH
Confidence 368999999999999999876
No 247
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.92 E-value=0.16 Score=48.76 Aligned_cols=23 Identities=43% Similarity=0.518 Sum_probs=20.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
-.++++|++|||||+|.+.+...
T Consensus 6 ~Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 6 FKILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHcC
Confidence 36899999999999999988753
No 248
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.85 E-value=0.22 Score=50.36 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=26.0
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
|+-+.+-|+-||||||+++.|++.++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 577899999999999999999999975443
No 249
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.82 E-value=0.16 Score=48.47 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=20.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
-.++++|++|||||+|...+...
T Consensus 4 ~Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 4 YKVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 47899999999999999988653
No 250
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.80 E-value=0.15 Score=49.59 Aligned_cols=21 Identities=38% Similarity=0.684 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.+++.|+||||||+|++.+..
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 689999999999999987753
No 251
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=86.80 E-value=0.28 Score=50.35 Aligned_cols=42 Identities=36% Similarity=0.393 Sum_probs=32.5
Q ss_pred cchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 187 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 187 GQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.|..+.+.+...+... .+...||+|.+|+|||.++-..+...
T Consensus 59 ~Q~~~~~~i~~~~~~~--------------~~~~~LL~GdvGsGKT~V~~~a~~~~ 100 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQP--------------LAMDRLVCGDVGFGKTEVAMRAAFLA 100 (233)
T ss_dssp HHHHHHHHHHHHHHSS--------------SCCEEEEECCCCTTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcc--------------CccCeEEEcCCCCCcHHHHHHHHHHH
Confidence 4777787777777643 35799999999999999997666544
No 252
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=86.72 E-value=0.14 Score=49.26 Aligned_cols=21 Identities=33% Similarity=0.615 Sum_probs=19.1
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++|+|+||+|||+|..+|..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999999864
No 253
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=86.68 E-value=0.11 Score=53.75 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=26.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se 851 (1165)
..+.++||+|||||||+++++..+... -+.++..+
T Consensus 29 e~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~ 65 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQP 65 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEE
Confidence 577899999999999999999887422 25555443
No 254
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.67 E-value=0.17 Score=48.90 Aligned_cols=22 Identities=32% Similarity=0.761 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|+||||||+|.+.+..
T Consensus 5 ~Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 5 FKVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998765
No 255
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=86.64 E-value=0.16 Score=50.69 Aligned_cols=24 Identities=29% Similarity=0.378 Sum_probs=21.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+-|.|-|+.||||||+++.|++.+
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 347788999999999999999987
No 256
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=86.62 E-value=0.13 Score=51.31 Aligned_cols=28 Identities=29% Similarity=0.418 Sum_probs=22.5
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEE
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIK 846 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~ 846 (1165)
-+-++|++||||||+|+.+. .+|.+.+.
T Consensus 4 iIgITG~igSGKStv~~~l~-~~G~~vid 31 (205)
T d1jjva_ 4 IVGLTGGIGSGKTTIANLFT-DLGVPLVD 31 (205)
T ss_dssp EEEEECSTTSCHHHHHHHHH-TTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHH-HCCCeEEE
Confidence 35689999999999999886 57876553
No 257
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.62 E-value=0.17 Score=48.15 Aligned_cols=21 Identities=29% Similarity=0.657 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|+||||||+|...+.+
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999987764
No 258
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.56 E-value=0.12 Score=53.92 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=27.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+.++||+|||||||+++++..+... -+.+|.-++
T Consensus 41 e~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i 78 (251)
T d1jj7a_ 41 EVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPL 78 (251)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEG
T ss_pred CEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEec
Confidence 578899999999999999999888532 255555443
No 259
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.55 E-value=0.13 Score=54.39 Aligned_cols=25 Identities=24% Similarity=0.326 Sum_probs=22.7
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+.++||+|||||||.++++..+.
T Consensus 63 e~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 63 EMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhCCCc
Confidence 5788999999999999999998874
No 260
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=86.50 E-value=0.19 Score=49.43 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=27.4
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se~ 852 (1165)
..++||.||||+|||++|-.+... |..|+.=|...+
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD~~~i 49 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIADDRVDV 49 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEEEEEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEecCeEEE
Confidence 378999999999999999887764 666665444433
No 261
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.41 E-value=0.18 Score=48.02 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=18.8
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|.|++|||||+|...+..
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 588999999999999998865
No 262
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=86.33 E-value=0.17 Score=48.35 Aligned_cols=22 Identities=23% Similarity=0.517 Sum_probs=19.5
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
..++++|.||||||+|..++..
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 5799999999999999988754
No 263
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=86.31 E-value=0.095 Score=54.33 Aligned_cols=25 Identities=36% Similarity=0.627 Sum_probs=22.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+.+.||+||||||+.++++....
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHHcCcC
Confidence 5788999999999999999999873
No 264
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=86.30 E-value=0.12 Score=53.53 Aligned_cols=37 Identities=16% Similarity=0.368 Sum_probs=28.2
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
...+.++||+|+|||||+++++..+... -+.+|+-++
T Consensus 29 Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 67 (241)
T d2pmka1 29 GEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDL 67 (241)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEET
T ss_pred CCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEe
Confidence 3678899999999999999999987532 255555443
No 265
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=86.27 E-value=0.17 Score=48.72 Aligned_cols=21 Identities=33% Similarity=0.615 Sum_probs=19.0
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|+||+|||+|..+|.+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999998864
No 266
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.17 E-value=0.19 Score=48.42 Aligned_cols=21 Identities=33% Similarity=0.637 Sum_probs=18.4
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|+||||||+|...+..
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 488999999999999987654
No 267
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.12 E-value=0.18 Score=48.28 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=19.1
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|++|||||+|.+.+..
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 689999999999999998875
No 268
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.04 E-value=0.17 Score=48.47 Aligned_cols=22 Identities=45% Similarity=0.789 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|++|||||+|.+.+..
T Consensus 6 ~Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 6 FKIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998875
No 269
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=86.00 E-value=0.2 Score=48.98 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=20.2
Q ss_pred CceEEEEccCCCChhHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+.++|+|+||+|||||.++|.+
T Consensus 23 ~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 23 LPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHhcC
Confidence 35799999999999999999863
No 270
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.97 E-value=0.19 Score=47.93 Aligned_cols=22 Identities=27% Similarity=0.564 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.||||||+|.+++..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 5 FKYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998875
No 271
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.96 E-value=0.19 Score=48.21 Aligned_cols=21 Identities=33% Similarity=0.797 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|+||||||+|.+.+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 689999999999999998764
No 272
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.94 E-value=0.2 Score=50.60 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHhCCCc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLSNAPF 246 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~ 246 (1165)
|.-+.|-|+-||||||+++.|++.++...
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 46789999999999999999999996543
No 273
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=85.87 E-value=0.15 Score=51.02 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEEecccc
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 254 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~ 254 (1165)
-+-++|++||||||+|+.+. .+|. ..+|+..+
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~--~vidaD~i 36 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGI--NVIDADII 36 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTC--EEEEHHHH
T ss_pred EEEEECCCcCCHHHHHHHHH-HCCC--cEEEchHH
Confidence 46689999999999999886 5664 45555443
No 274
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=85.85 E-value=0.094 Score=54.37 Aligned_cols=24 Identities=38% Similarity=0.684 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..+.+.||+||||||+.++++...
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 588999999999999999999987
No 275
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=85.80 E-value=0.19 Score=48.14 Aligned_cols=21 Identities=33% Similarity=0.711 Sum_probs=19.0
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.+.++|+||+|||+|.++|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 578999999999999998864
No 276
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.79 E-value=0.48 Score=47.47 Aligned_cols=32 Identities=28% Similarity=0.209 Sum_probs=26.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
.-|.|-|+-||||||+++.|++.+......+.
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~ 35 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 35 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEE
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhCCEEEE
Confidence 45788999999999999999999977665544
No 277
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=85.63 E-value=0.32 Score=50.83 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=28.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
.-..|+||||||||++|-.++... +...+.+|...
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~ 92 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEH 92 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 678999999999999998888776 56667777644
No 278
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=85.61 E-value=0.24 Score=52.49 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=26.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~ 852 (1165)
.-+-+.|++|+||||+++++.+.+ +.+...+.+..|
T Consensus 5 pIIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 5 PIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp CEEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 468899999999999999999987 455566777665
No 279
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=85.59 E-value=0.15 Score=53.38 Aligned_cols=24 Identities=33% Similarity=0.524 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..+-++||+|||||||+++|+..+
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 578999999999999999999876
No 280
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=85.47 E-value=0.15 Score=53.21 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=22.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+-++||+|||||||+++++....
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl~~ 53 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFLEK 53 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHHcCcc
Confidence 5788999999999999999998763
No 281
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=85.41 E-value=0.2 Score=52.24 Aligned_cols=24 Identities=29% Similarity=0.526 Sum_probs=18.4
Q ss_pred cEEEEEcCCCCCchHH-HHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEI-ARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~l-Ak~lA~~l 242 (1165)
+++++.||||||||++ +..++..+
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ll 39 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHLI 39 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHHHHH
Confidence 6799999999999975 45555543
No 282
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.39 E-value=0.21 Score=47.81 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=20.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
-.++++|.+|||||+|...+...
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 7 FKLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 36899999999999999988753
No 283
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=85.39 E-value=0.2 Score=49.25 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~~ 254 (1165)
.++||.||||+|||++|-.+.+. |..++.=|...+
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD~~~i 49 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR-GHRLIADDRVDV 49 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT-TCEEEEEEEEEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc-CCeEEecCeEEE
Confidence 78999999999999999887764 666655454443
No 284
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.35 E-value=0.2 Score=47.80 Aligned_cols=22 Identities=27% Similarity=0.641 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|++|||||+|..++..
T Consensus 4 ~Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 4 YKLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 3689999999999999998865
No 285
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=85.34 E-value=0.17 Score=50.55 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=23.5
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEEEecCC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se 851 (1165)
-+-++|++||||||+|+.+. .+|.+ .+|+..
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~~--vidaD~ 35 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGIN--VIDADI 35 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTCE--EEEHHH
T ss_pred EEEEECCCcCCHHHHHHHHH-HCCCc--EEEchH
Confidence 46689999999999999886 66754 445533
No 286
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=85.34 E-value=0.2 Score=49.05 Aligned_cols=22 Identities=27% Similarity=0.484 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
..+.|+|+||+|||||.++|.+
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHhcC
Confidence 5799999999999999999973
No 287
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=85.30 E-value=0.38 Score=52.50 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=16.9
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
+-.++.||||||||++...+.
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~l 184 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKLL 184 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHHH
Confidence 568889999999999875443
No 288
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=85.22 E-value=0.23 Score=49.57 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=21.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.-++++||||+|||+++-.+|-..
T Consensus 35 ~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 35 SVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 577889999999999999998765
No 289
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.19 E-value=0.22 Score=47.64 Aligned_cols=22 Identities=45% Similarity=0.591 Sum_probs=19.3
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.++++|++|||||+|...+...
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 5899999999999999987653
No 290
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=85.09 E-value=0.2 Score=52.82 Aligned_cols=24 Identities=33% Similarity=0.563 Sum_probs=18.7
Q ss_pred cEEEEEcCCCCCchHHH-HHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIA-RRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lA-k~lA~~l 242 (1165)
+++++.||||||||+++ ..++..+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHHH
Confidence 67999999999999754 5556555
No 291
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.03 E-value=0.23 Score=47.86 Aligned_cols=21 Identities=33% Similarity=0.849 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|++|||||+|.+.+..
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999988754
No 292
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=85.02 E-value=0.22 Score=47.64 Aligned_cols=21 Identities=33% Similarity=0.711 Sum_probs=18.8
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+.++|+||+|||+|.++|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 588999999999999998864
No 293
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.02 E-value=0.25 Score=47.52 Aligned_cols=22 Identities=23% Similarity=0.623 Sum_probs=19.4
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4799999999999999987764
No 294
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.02 E-value=0.2 Score=48.64 Aligned_cols=21 Identities=38% Similarity=0.684 Sum_probs=18.3
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|+||||||+|++.+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 488999999999999987753
No 295
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=84.97 E-value=0.35 Score=52.05 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=27.3
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---C--CCeEEEecCCc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---N--APFIKIEATKF 852 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~--~~fi~l~~se~ 852 (1165)
...+-+.||||+|||||...++..+ + ...+.+|.+.-
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~ 95 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSP 95 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC--
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCcee
Confidence 3678899999999999999998776 2 23466666543
No 296
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.96 E-value=0.21 Score=47.51 Aligned_cols=22 Identities=41% Similarity=0.681 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCchHHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
.+++.|+||||||+|.+++...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 6899999999999999988653
No 297
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.95 E-value=0.22 Score=47.45 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++|+|.+|||||+|.+.+..
T Consensus 4 fKivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 4 FKVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998764
No 298
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.92 E-value=0.23 Score=47.09 Aligned_cols=22 Identities=36% Similarity=0.588 Sum_probs=19.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.+++.|++|||||+|.+.+..
T Consensus 3 ~Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 3 FKIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998864
No 299
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.88 E-value=0.23 Score=47.23 Aligned_cols=22 Identities=23% Similarity=0.611 Sum_probs=19.3
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|++|||||+|...+..
T Consensus 4 ~Ki~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 4 YKVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999988765
No 300
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=84.78 E-value=0.4 Score=49.99 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=28.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se 851 (1165)
.-..|+||||||||++|-.++... +...+.+|...
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~ 92 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEH 92 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 578999999999999998887766 45567777654
No 301
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=84.66 E-value=0.22 Score=54.93 Aligned_cols=34 Identities=29% Similarity=0.594 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEec
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEA 251 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~ 251 (1165)
..|++++|+||+|||++.+.+...+ +.+++.+|.
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3799999999999999987666544 667777775
No 302
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=84.61 E-value=0.19 Score=49.57 Aligned_cols=33 Identities=33% Similarity=0.515 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEecc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s 252 (1165)
.++||.||+|+|||++|-.+.+. |..++.=|..
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~-G~~lvaDD~v 48 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK-NHLFVGDDAI 48 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT-TCEEEEEEEE
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCceecCCeE
Confidence 68999999999999999877653 5555443433
No 303
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.61 E-value=0.22 Score=47.74 Aligned_cols=22 Identities=27% Similarity=0.537 Sum_probs=19.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.+++.|.||||||+|.+.+..
T Consensus 6 ~KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 6 FKFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998764
No 304
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.60 E-value=0.22 Score=47.67 Aligned_cols=21 Identities=24% Similarity=0.635 Sum_probs=19.2
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++|+|.||||||+|.+.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 699999999999999998865
No 305
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=84.54 E-value=0.22 Score=46.89 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++|+|+||+|||+|.++|..
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999998864
No 306
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.41 E-value=0.23 Score=47.38 Aligned_cols=21 Identities=33% Similarity=0.680 Sum_probs=18.4
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|.+|||||+|...+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 689999999999999987754
No 307
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=84.32 E-value=0.22 Score=49.07 Aligned_cols=32 Identities=31% Similarity=0.496 Sum_probs=24.5
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
..++||.||+|+|||++|-.+... |..++.=|
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lvaDD 46 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVGDD 46 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceecCC
Confidence 378999999999999999877653 55555433
No 308
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=84.31 E-value=0.49 Score=50.88 Aligned_cols=36 Identities=17% Similarity=0.334 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CC--CceEEeccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NA--PFIKIEATK 253 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~--~~i~ld~s~ 253 (1165)
...+-++||||+|||||..+|+..+ |. ..+.+|.+.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss 94 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCce
Confidence 3679999999999999999999877 32 346666654
No 309
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.24 E-value=0.25 Score=47.18 Aligned_cols=22 Identities=32% Similarity=0.643 Sum_probs=19.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|++|||||+|.+.+..
T Consensus 7 fKi~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 7 FKVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998764
No 310
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.19 E-value=0.26 Score=47.19 Aligned_cols=21 Identities=48% Similarity=0.879 Sum_probs=19.0
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|++|||||+|.+.+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 311
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.16 E-value=0.25 Score=47.86 Aligned_cols=21 Identities=29% Similarity=0.741 Sum_probs=19.0
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|.||||||+|...+..
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999998865
No 312
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.14 E-value=0.24 Score=47.14 Aligned_cols=22 Identities=23% Similarity=0.546 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
..+++.|++|||||+|.+.+..
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5799999999999999998864
No 313
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=84.12 E-value=0.3 Score=46.62 Aligned_cols=21 Identities=33% Similarity=0.612 Sum_probs=18.4
Q ss_pred CceEEEEccCCCChhHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRL 836 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~l 836 (1165)
.-.++++|+||||||+|.+.+
T Consensus 16 ~~kI~vvG~~~vGKSsLi~~l 36 (176)
T d1fzqa_ 16 EVRILLLGLDNAGKTTLLKQL 36 (176)
T ss_dssp CEEEEEEESTTSSHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHH
Confidence 357999999999999998766
No 314
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.10 E-value=0.26 Score=47.09 Aligned_cols=21 Identities=33% Similarity=0.797 Sum_probs=18.5
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|+||||||+|...+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 489999999999999988764
No 315
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=84.01 E-value=0.3 Score=53.79 Aligned_cols=35 Identities=29% Similarity=0.582 Sum_probs=27.1
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 850 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~s 850 (1165)
..|++++|+||+|||++.+.+...+ +.+++.+|..
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4799999999999999887655443 6667777753
No 316
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.87 E-value=0.27 Score=46.96 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|++|||||+|.+.+..
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999988765
No 317
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.86 E-value=0.27 Score=47.22 Aligned_cols=22 Identities=27% Similarity=0.646 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|+||||||+|...+..
T Consensus 7 ~KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 7 FKVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 4699999999999999988865
No 318
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.76 E-value=0.25 Score=47.58 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=19.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
..++++|++|||||+|...+...
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 47899999999999999887653
No 319
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=83.76 E-value=0.4 Score=53.01 Aligned_cols=26 Identities=35% Similarity=0.390 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
+-+|+.||+|+||||+..++-..++.
T Consensus 159 GliLvtGpTGSGKSTTl~~~l~~~~~ 184 (401)
T d1p9ra_ 159 GIILVTGPTGSGKSTTLYAGLQELNS 184 (401)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHCC
T ss_pred ceEEEEcCCCCCccHHHHHHhhhhcC
Confidence 78999999999999999999988843
No 320
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=83.75 E-value=0.45 Score=52.58 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=29.5
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC---CeEEE-ecCCccccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA---PFIKI-EATKFTEVG 856 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~---~fi~l-~~se~~~~G 856 (1165)
.+-+|+.||+|+||||+..++-+.++. +++.+ |..++.-+|
T Consensus 158 ~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~ 202 (401)
T d1p9ra_ 158 HGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDG 202 (401)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSS
T ss_pred hceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccccCC
Confidence 377899999999999999999888743 34333 455554443
No 321
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=83.73 E-value=0.11 Score=54.13 Aligned_cols=36 Identities=17% Similarity=0.417 Sum_probs=27.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
..+.++||+|||||||++.|+..+... -+.++..++
T Consensus 45 e~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 82 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNI 82 (255)
T ss_dssp CEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEG
T ss_pred CEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEc
Confidence 689999999999999999999877422 255554443
No 322
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.71 E-value=0.26 Score=46.69 Aligned_cols=21 Identities=29% Similarity=0.602 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.+++.|.+|||||+|.+.+..
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 578999999999999998764
No 323
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.70 E-value=0.41 Score=48.01 Aligned_cols=31 Identities=29% Similarity=0.203 Sum_probs=26.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEE
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~l 249 (1165)
.=+.|-|+-||||||+++.|++.+......+
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~ 34 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLL 34 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhCCEEE
Confidence 5678999999999999999999997655443
No 324
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=83.67 E-value=0.33 Score=50.75 Aligned_cols=42 Identities=29% Similarity=0.370 Sum_probs=32.6
Q ss_pred cchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 187 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 187 GQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.|..|+..|...+... .+.+.||.|.+|||||.+|-..+...
T Consensus 87 ~Q~~ai~ei~~d~~~~--------------~~m~rLL~GdvGSGKT~Va~~a~~~~ 128 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISE--------------KPMNRLLQGDVGSGKTVVAQLAILDN 128 (264)
T ss_dssp HHHHHHHHHHHHHHSS--------------SCCCCEEECCSSSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhcc--------------CcceeeeeccccccccHHHHHHHHHH
Confidence 4777888877776543 35789999999999999997766554
No 325
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.66 E-value=0.28 Score=46.66 Aligned_cols=21 Identities=29% Similarity=0.705 Sum_probs=18.8
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|++|||||+|...+..
T Consensus 5 Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999988765
No 326
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=83.59 E-value=0.17 Score=48.38 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCCCchHHHHHHH
Q psy2392 218 PKNILMIGPTGVGKTEIARRLA 239 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA 239 (1165)
...+.|+|+|++|||+|.++|.
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHh
Confidence 4689999999999999998874
No 327
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=83.53 E-value=0.31 Score=44.80 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
...++.+|||+|||+++-.+....+...+.+-
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~ 40 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLN 40 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEc
Confidence 67899999999999988665555555544443
No 328
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.53 E-value=0.28 Score=46.69 Aligned_cols=22 Identities=36% Similarity=0.690 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 5 ~Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 5 LKVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4789999999999999998865
No 329
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=83.51 E-value=0.27 Score=46.13 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|+||+|||+|.+++..
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999988763
No 330
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.43 E-value=0.27 Score=47.00 Aligned_cols=21 Identities=38% Similarity=0.805 Sum_probs=18.3
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|++|||||+|.+.+..
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhC
Confidence 588999999999999987753
No 331
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.39 E-value=0.3 Score=46.48 Aligned_cols=21 Identities=29% Similarity=0.643 Sum_probs=18.7
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|.||||||+|.+.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 588999999999999988765
No 332
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.38 E-value=0.29 Score=46.60 Aligned_cols=23 Identities=22% Similarity=0.537 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
-.++++|.+|||||+|.+.+...
T Consensus 4 ~KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 4 YKLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 47899999999999999988653
No 333
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=83.36 E-value=0.27 Score=51.12 Aligned_cols=23 Identities=30% Similarity=0.554 Sum_probs=17.4
Q ss_pred ceEEEEccCCCChhHHH-HHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIA-RRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lA-k~lA~~ 839 (1165)
+++|+.||||||||+++ ..++..
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~l 38 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHL 38 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHHHH
Confidence 66899999999999753 444444
No 334
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=83.29 E-value=0.28 Score=46.99 Aligned_cols=22 Identities=27% Similarity=0.664 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
..++++|.+|||||+|.+.+..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 6899999999999999998864
No 335
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.26 E-value=0.12 Score=52.11 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+-+.+-||-||||||+++.|++.+.
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHh
Confidence 5688999999999999999999984
No 336
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=83.13 E-value=0.2 Score=47.81 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=19.6
Q ss_pred CceEEEEccCCCChhHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA 837 (1165)
...+.|+|+|++|||+|.++|.
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHh
Confidence 4789999999999999998774
No 337
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.11 E-value=0.77 Score=46.89 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..++++||..+|||++.|++|-..
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~ 65 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIA 65 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHHHH
Confidence 578999999999999999998654
No 338
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=83.07 E-value=0.4 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh----CCCceEEec
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS----NAPFIKIEA 251 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l----~~~~i~ld~ 251 (1165)
.-+++.|+||+|||+++..+|..+ +.+...++.
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 478999999999999998888543 555555544
No 339
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=83.05 E-value=0.31 Score=50.13 Aligned_cols=24 Identities=29% Similarity=0.392 Sum_probs=21.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.-.+|+|+||+|||+++-.+|..+
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 577899999999999999998765
No 340
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.01 E-value=0.29 Score=46.89 Aligned_cols=21 Identities=29% Similarity=0.615 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|.|.||||||+|.+.+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999988764
No 341
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.94 E-value=0.31 Score=46.96 Aligned_cols=22 Identities=41% Similarity=0.750 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|++|||||+|.+.+..
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4799999999999999998875
No 342
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.89 E-value=0.31 Score=46.23 Aligned_cols=21 Identities=43% Similarity=0.776 Sum_probs=18.7
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|+||||||+|.+.+..
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 488999999999999998765
No 343
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.87 E-value=0.29 Score=47.00 Aligned_cols=21 Identities=38% Similarity=0.725 Sum_probs=18.7
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++|.|++|||||+|.+.+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999988763
No 344
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.87 E-value=0.29 Score=46.75 Aligned_cols=21 Identities=24% Similarity=0.635 Sum_probs=18.8
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|.||||||+|.+.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999988764
No 345
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=82.80 E-value=0.3 Score=51.34 Aligned_cols=24 Identities=33% Similarity=0.563 Sum_probs=18.0
Q ss_pred ceEEEEccCCCChhHHH-HHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIA-RRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lA-k~lA~~l 840 (1165)
+.+++.||||||||+++ ..++..+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHHH
Confidence 56899999999999754 4455544
No 346
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=82.76 E-value=0.24 Score=51.12 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=27.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+.|.||.|+|||||.++++..+... -+.+++.++
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i 70 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDI 70 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCCCCCccEEEeccccc
Confidence 567889999999999999999887432 255555443
No 347
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.76 E-value=0.33 Score=45.93 Aligned_cols=21 Identities=38% Similarity=0.668 Sum_probs=18.7
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|++|||||+|.+.+..
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999988764
No 348
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.69 E-value=0.33 Score=46.36 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=19.7
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
-.++++|.+|||||+|...+.+.
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 7 FKLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 46899999999999999887753
No 349
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=82.59 E-value=0.24 Score=51.13 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=27.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
.-+-|.||.|+|||||.++++..+... -+.++..++
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i 70 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDI 70 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCCCCCccEEEeccccc
Confidence 578899999999999999999987322 245554443
No 350
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.49 E-value=0.33 Score=46.27 Aligned_cols=21 Identities=29% Similarity=0.665 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|.+|||||+|...+..
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999987754
No 351
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=82.48 E-value=0.15 Score=53.31 Aligned_cols=36 Identities=17% Similarity=0.417 Sum_probs=27.5
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+.++||+|||||||++.++..+... -+.++..++
T Consensus 45 e~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 82 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNI 82 (255)
T ss_dssp CEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEG
T ss_pred CEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEc
Confidence 578999999999999999998877532 255555443
No 352
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.46 E-value=0.33 Score=46.08 Aligned_cols=22 Identities=23% Similarity=0.546 Sum_probs=19.3
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
..+++.|++|||||+|.+.+..
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4689999999999999988764
No 353
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=82.44 E-value=0.31 Score=47.61 Aligned_cols=28 Identities=32% Similarity=0.568 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCce
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFI 247 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i 247 (1165)
..+||.||||+|||++|-.+.+. |..++
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 69999999999999999776655 44443
No 354
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.44 E-value=0.34 Score=46.12 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++|+|.+|||||+|...+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999988764
No 355
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.36 E-value=0.16 Score=51.19 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
+-|.+-||-||||||+++.|++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 56889999999999999999999854
No 356
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=82.36 E-value=0.22 Score=47.83 Aligned_cols=21 Identities=43% Similarity=0.610 Sum_probs=19.0
Q ss_pred cEEEEEcCCCCCchHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLA 239 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA 239 (1165)
-.++++|+||||||+|.+.+.
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~ 33 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLK 33 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHh
Confidence 579999999999999999764
No 357
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.31 E-value=0.29 Score=46.62 Aligned_cols=21 Identities=33% Similarity=0.680 Sum_probs=18.0
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|.+|||||+|...+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 488999999999999887653
No 358
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=82.17 E-value=0.35 Score=47.20 Aligned_cols=29 Identities=31% Similarity=0.531 Sum_probs=22.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCCCeE
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi 845 (1165)
..++||.||+|+|||++|-.+.+. |..++
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 378999999999999999776665 44443
No 359
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=82.13 E-value=0.22 Score=48.10 Aligned_cols=20 Identities=50% Similarity=0.740 Sum_probs=18.5
Q ss_pred cEEEEEcCCCCCchHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRL 238 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~l 238 (1165)
-.++++|+||||||+|.+.+
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l 37 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRL 37 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999876
No 360
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=82.09 E-value=0.27 Score=49.81 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=24.4
Q ss_pred EEEEEcCCCCCchHHHHHHHHHhCCCceEEec
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~ 251 (1165)
-+-|+|+.||||||+|+.|++.+| +..++.
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g--~~~i~~ 32 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYS--AVKYQL 32 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSC--EEECCT
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC--CeEEcc
Confidence 467899999999999999999875 345553
No 361
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=81.95 E-value=0.47 Score=43.49 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=23.7
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEe
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~ 848 (1165)
...++.+|||+|||+++-.+....+...+.+-
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~ 40 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLN 40 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEc
Confidence 67899999999999988665555565544443
No 362
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.95 E-value=0.32 Score=47.65 Aligned_cols=22 Identities=36% Similarity=0.671 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|++|||||+|...+..
T Consensus 7 ~KivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 7 FKLLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHhh
Confidence 3689999999999999998864
No 363
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=81.85 E-value=0.36 Score=46.67 Aligned_cols=21 Identities=29% Similarity=0.741 Sum_probs=18.7
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|.||||||+|...+.+
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999988765
No 364
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.83 E-value=0.35 Score=46.17 Aligned_cols=22 Identities=32% Similarity=0.643 Sum_probs=18.9
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|++|||||+|.+.+.+
T Consensus 7 fKi~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 7 FKVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999887754
No 365
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=81.82 E-value=0.35 Score=50.55 Aligned_cols=26 Identities=35% Similarity=0.537 Sum_probs=23.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
..++|+|||++|||+++.+++..++.
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~lg~ 130 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTVPF 130 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSC
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 57889999999999999999999965
No 366
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=81.80 E-value=0.4 Score=51.52 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=28.2
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh---C--CCceEEeccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS---N--APFIKIEATK 253 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l---~--~~~i~ld~s~ 253 (1165)
..+=+.||||+|||||...|+..+ + ...+.+|.+.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccccc
Confidence 578999999999999999999876 3 3446777665
No 367
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.77 E-value=0.34 Score=46.99 Aligned_cols=22 Identities=32% Similarity=0.531 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
..++|.|.+|||||+|.+.+..
T Consensus 3 ~KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 5789999999999999998765
No 368
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.71 E-value=0.36 Score=46.69 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 6 iKivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 3799999999999999998765
No 369
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=81.68 E-value=0.34 Score=49.85 Aligned_cols=24 Identities=29% Similarity=0.392 Sum_probs=20.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.-.+++|+||+|||+++-.+|..+
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 467889999999999998888764
No 370
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=81.68 E-value=0.41 Score=49.99 Aligned_cols=26 Identities=35% Similarity=0.537 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
..++|+|||++|||+++.+|++.+|.
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~lg~ 130 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTVPF 130 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSC
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 68899999999999999999999853
No 371
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.62 E-value=0.38 Score=45.49 Aligned_cols=21 Identities=29% Similarity=0.602 Sum_probs=18.4
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.+++.|.+|||||+|.+.+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998764
No 372
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=81.59 E-value=0.31 Score=49.27 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=24.7
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCCCeEEEec
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 849 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~ 849 (1165)
-+-|+|+.||||||+|+.+++.+|. ..++.
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~--~~i~~ 32 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSA--VKYQL 32 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCE--EECCT
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCC--eEEcc
Confidence 4778999999999999999998864 55553
No 373
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.59 E-value=0.37 Score=46.27 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=19.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
..+++.|++|||||+|...+.+.
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45889999999999999877653
No 374
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.56 E-value=0.38 Score=46.06 Aligned_cols=22 Identities=27% Similarity=0.646 Sum_probs=19.2
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|+||||||+|...+..
T Consensus 7 ~KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 7 FKVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 3589999999999999987765
No 375
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=81.38 E-value=0.35 Score=46.47 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=19.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
+.+.|+|.||+|||+|.++|..
T Consensus 6 ~~I~lvG~~~~GKSSLin~l~~ 27 (178)
T d1wf3a1 6 GFVAIVGKPNVGKSTLLNNLLG 27 (178)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 5799999999999999998864
No 376
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=81.33 E-value=0.37 Score=49.11 Aligned_cols=23 Identities=30% Similarity=0.391 Sum_probs=19.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
...+|.|+||||||+|..+|...
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTT
T ss_pred CeEEEECCCCCCHHHHHHhhcch
Confidence 57789999999999999988543
No 377
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=81.26 E-value=0.19 Score=47.24 Aligned_cols=22 Identities=27% Similarity=0.587 Sum_probs=19.9
Q ss_pred EEEEEcCCCCCchHHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
.+.|+|+||+|||+|.++|...
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5789999999999999999765
No 378
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=81.20 E-value=0.34 Score=46.62 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=19.8
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
+.++|+|.||+|||+|.+++.+
T Consensus 6 ~~I~lvG~~~~GKSSLin~l~~ 27 (178)
T d1wf3a1 6 GFVAIVGKPNVGKSTLLNNLLG 27 (178)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 5799999999999999998864
No 379
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.17 E-value=0.4 Score=45.55 Aligned_cols=22 Identities=36% Similarity=0.690 Sum_probs=19.2
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|.+|||||+|.+.+.+
T Consensus 5 ~Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 5 LKVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999988765
No 380
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.13 E-value=0.39 Score=45.91 Aligned_cols=22 Identities=23% Similarity=0.573 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 5789999999999999998875
No 381
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.00 E-value=0.35 Score=46.11 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=19.8
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
+.|+|+|.||+|||+|.++|.+
T Consensus 6 ~~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 6 GFIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEEECSSSSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 5688999999999999999864
No 382
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.85 E-value=0.36 Score=46.12 Aligned_cols=20 Identities=40% Similarity=0.863 Sum_probs=17.5
Q ss_pred eEEEEccCCCChhHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA 837 (1165)
.++++|++|||||+|.+.+.
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~ 22 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFG 22 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHh
Confidence 47899999999999988764
No 383
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=80.80 E-value=0.3 Score=50.75 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC--ceEEecccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 254 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~--~i~ld~s~~ 254 (1165)
..+-|.||.|+|||||.++|+..+... -+.++..++
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i 68 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI 68 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEec
Confidence 578899999999999999999987422 255555444
No 384
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=80.76 E-value=0.31 Score=50.64 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=27.8
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCC--eEEEecCCc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAP--FIKIEATKF 852 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~--fi~l~~se~ 852 (1165)
..+-|.||.|+|||||.++++..+... -+.++..++
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i 68 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI 68 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEec
Confidence 467899999999999999999987433 255555554
No 385
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.64 E-value=0.43 Score=45.89 Aligned_cols=22 Identities=41% Similarity=0.750 Sum_probs=19.4
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|++|||||+|.+.+..
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999998765
No 386
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=80.61 E-value=0.77 Score=46.92 Aligned_cols=42 Identities=36% Similarity=0.393 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHc
Q psy2392 785 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 785 GQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.|..+.+.+...+... .+...||+|.+|+|||.++-..+...
T Consensus 59 ~Q~~~~~~i~~~~~~~--------------~~~~~LL~GdvGsGKT~V~~~a~~~~ 100 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQP--------------LAMDRLVCGDVGFGKTEVAMRAAFLA 100 (233)
T ss_dssp HHHHHHHHHHHHHHSS--------------SCCEEEEECCCCTTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcc--------------CccCeEEEcCCCCCcHHHHHHHHHHH
Confidence 5777777777776532 14788999999999999986655443
No 387
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=80.52 E-value=0.42 Score=45.65 Aligned_cols=23 Identities=26% Similarity=0.602 Sum_probs=19.9
Q ss_pred CceEEEEccCCCChhHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
...++++|.+|||||+|.+.+..
T Consensus 4 ~~KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 4 LHKVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHH
T ss_pred eeEEEEECCCCcCHHHHHHHHHh
Confidence 35789999999999999988764
No 388
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.41 E-value=0.4 Score=46.94 Aligned_cols=22 Identities=36% Similarity=0.671 Sum_probs=18.9
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.+++.|++|||||+|...+..
T Consensus 7 ~KivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 7 FKLLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHhh
Confidence 3588999999999999988764
No 389
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=80.36 E-value=0.38 Score=45.85 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
+.++|.|.||+|||+|.++|.+
T Consensus 6 ~~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 6 GFIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEEECSSSSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 5689999999999999999964
No 390
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.28 E-value=0.4 Score=46.56 Aligned_cols=22 Identities=27% Similarity=0.380 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 10 ~Ki~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 10 LKCVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHhh
Confidence 5799999999999999998764
No 391
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=80.19 E-value=0.32 Score=46.60 Aligned_cols=21 Identities=43% Similarity=0.610 Sum_probs=18.5
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
-.++++|+||||||+|.+.+.
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~ 33 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLK 33 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHh
Confidence 469999999999999988764
No 392
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=80.13 E-value=0.32 Score=46.94 Aligned_cols=21 Identities=48% Similarity=0.697 Sum_probs=18.4
Q ss_pred CceEEEEccCCCChhHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRL 836 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~l 836 (1165)
.-.++++|+||||||+|.+.+
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l 37 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRL 37 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHT
T ss_pred eEEEEEECCCCCCHHHHHHHH
Confidence 367999999999999998765
No 393
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.13 E-value=0.41 Score=46.69 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.7
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.+++.|++|||||+|...+..
T Consensus 5 KvvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999988765
No 394
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=80.10 E-value=0.71 Score=47.44 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=24.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc----CCCeEEEec
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS----NAPFIKIEA 849 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l----~~~fi~l~~ 849 (1165)
.-+++.|+||+|||+++..+|-.+ +.+...++.
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 467889999999999998887432 556555544
No 395
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.08 E-value=0.43 Score=45.73 Aligned_cols=21 Identities=38% Similarity=0.710 Sum_probs=18.3
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
-.++|.|++|||||+|...+.
T Consensus 4 ~Kv~lvG~~~vGKTsLi~~~~ 24 (172)
T d2g3ya1 4 YRVVLIGEQGVGKSTLANIFA 24 (172)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHH
Confidence 358999999999999988765
No 396
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.07 E-value=0.46 Score=45.10 Aligned_cols=22 Identities=23% Similarity=0.628 Sum_probs=19.1
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|.+|||||+|.+.+..
T Consensus 4 ~KivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 4 YKLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHc
Confidence 4589999999999999988764
No 397
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=79.91 E-value=0.31 Score=50.17 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=22.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
..+-|.||.|+|||||.++|+..+.
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCC
Confidence 4677999999999999999999883
No 398
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.88 E-value=0.23 Score=47.67 Aligned_cols=21 Identities=29% Similarity=0.642 Sum_probs=17.9
Q ss_pred EEEEEcCCCCCchHHHHHHHH
Q psy2392 220 NILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
.++++|++|||||+|..++..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 689999999999999887653
No 399
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.72 E-value=0.29 Score=46.91 Aligned_cols=22 Identities=41% Similarity=0.690 Sum_probs=9.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.+++.|.||||||+|..++..
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 7 FKLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEEECCCCC-----------
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999987753
No 400
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.47 E-value=0.49 Score=44.95 Aligned_cols=21 Identities=29% Similarity=0.665 Sum_probs=18.2
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|.+|||||+|...+..
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 588999999999999887654
No 401
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=79.27 E-value=0.49 Score=48.23 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=19.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+..+|.|+||+|||+|..+|....
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~ 119 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGL 119 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTC
T ss_pred CeEEEECCCCCCHHHHHHhhcchh
Confidence 567899999999999999875443
No 402
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=79.27 E-value=0.64 Score=45.46 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=27.9
Q ss_pred cEEEEEcC-CCCCchHHHHHHHHHh---CCCceEEec
Q psy2392 219 KNILMIGP-TGVGKTEIARRLAKLS---NAPFIKIEA 251 (1165)
Q Consensus 219 ~~~Ll~GP-pG~GKT~lAk~lA~~l---~~~~i~ld~ 251 (1165)
++++++|- ||||||+++-.||..+ |.....+|+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 57899999 6999999999999888 677777775
No 403
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=79.25 E-value=0.24 Score=46.46 Aligned_cols=22 Identities=27% Similarity=0.587 Sum_probs=19.7
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.+.|+|.||+|||+|.+++...
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999999765
No 404
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.17 E-value=0.5 Score=45.70 Aligned_cols=22 Identities=32% Similarity=0.531 Sum_probs=19.1
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
..++|.|.+|||||+|.+.+.+
T Consensus 3 ~KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4589999999999999987765
No 405
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=79.12 E-value=0.45 Score=48.89 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=22.2
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
..+-|.||.|+|||||.++++..+.
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCC
Confidence 4667999999999999999999884
No 406
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=78.72 E-value=0.35 Score=49.44 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=21.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
..+-+.||.|+|||||.++++...
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHTSC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 567889999999999999998844
No 407
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=78.71 E-value=0.34 Score=49.54 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=21.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..+-+.||+|+|||||.++++...
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHTSC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 578899999999999999998843
No 408
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.68 E-value=0.53 Score=45.41 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=19.1
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|.+|||||+|.+.+.+
T Consensus 6 iKivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 3689999999999999987764
No 409
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.43 E-value=0.55 Score=44.79 Aligned_cols=22 Identities=23% Similarity=0.573 Sum_probs=19.2
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.++++|.+|||||+|...+..
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4689999999999999988765
No 410
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=78.34 E-value=0.84 Score=47.64 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=28.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCCccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATKFTE 854 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se~~~ 854 (1165)
..-..|+||||||||++|-.++... +...+.+|...-.+
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~ 101 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALD 101 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCC
T ss_pred ceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCC
Confidence 3678899999999999997776655 55557777755433
No 411
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=78.33 E-value=0.37 Score=46.55 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.5
Q ss_pred cEEEEEcCCCCCchHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLA 239 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA 239 (1165)
..+-|+|+|++|||+|..+|.
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~ 22 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVS 22 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSE
T ss_pred CeEEEECCCCCCHHHHHHHHh
Confidence 467899999999999999874
No 412
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=78.21 E-value=1.5 Score=44.25 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
..++++||..+|||++.|+++-..
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~~ 59 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALIA 59 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHHH
T ss_pred cEEEEECCCccccchhhhhhHHHH
Confidence 358999999999999999988654
No 413
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=78.21 E-value=0.7 Score=48.28 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
..-..|+||||||||++|-.++... +...+.+|...
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCc
Confidence 3678999999999999997777665 55567777654
No 414
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=78.11 E-value=0.35 Score=46.49 Aligned_cols=21 Identities=14% Similarity=0.411 Sum_probs=18.6
Q ss_pred cEEEEEcCCCCCchHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLA 239 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA 239 (1165)
..+.|+|.||+|||+|.++|.
T Consensus 2 ~~VaivG~~nvGKSTLin~L~ 22 (180)
T d1udxa2 2 ADVGLVGYPNAGKSSLLAAMT 22 (180)
T ss_dssp CSEEEECCGGGCHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 458899999999999999875
No 415
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=78.02 E-value=0.4 Score=43.29 Aligned_cols=25 Identities=16% Similarity=0.056 Sum_probs=18.6
Q ss_pred CcEEEEEcCCCCCchHHHH-HHHHHh
Q psy2392 218 PKNILMIGPTGVGKTEIAR-RLAKLS 242 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk-~lA~~l 242 (1165)
..+.++.+|||+|||..+- ++....
T Consensus 7 ~~~~il~~~tGsGKT~~~~~~~~~~~ 32 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFLPQILAEC 32 (140)
T ss_dssp TCEEEECCCTTSSTTTTHHHHHHHHH
T ss_pred CCcEEEEcCCCCChhHHHHHHHHHHh
Confidence 3689999999999997763 334443
No 416
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=78.02 E-value=0.4 Score=46.12 Aligned_cols=21 Identities=14% Similarity=0.411 Sum_probs=18.4
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
+.+.|+|.||+|||+|.++|.
T Consensus 2 ~~VaivG~~nvGKSTLin~L~ 22 (180)
T d1udxa2 2 ADVGLVGYPNAGKSSLLAAMT 22 (180)
T ss_dssp CSEEEECCGGGCHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 358999999999999998874
No 417
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=77.80 E-value=0.92 Score=44.91 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCCceEEe
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld 250 (1165)
.+.++..|||+|||.++-.++..++.+.+.+-
T Consensus 86 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~ 117 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHVAMAAINELSTPTLIVV 117 (206)
T ss_dssp SEEEEEESSSTTHHHHHHHHHHHSCSCEEEEE
T ss_pred CCcEEEeCCCCCceehHHhHHHHhcCceeEEE
Confidence 46678899999999999988888876655443
No 418
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=77.70 E-value=0.75 Score=49.26 Aligned_cols=39 Identities=18% Similarity=0.325 Sum_probs=29.6
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---C--CCeEEEecCCccc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---N--APFIKIEATKFTE 854 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~--~~fi~l~~se~~~ 854 (1165)
...+-+.||||+|||||...+...+ + ...+.+|.+.=.+
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~ 94 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRT 94 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSS
T ss_pred ceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHH
Confidence 3568889999999999999999775 3 3347777766443
No 419
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.55 E-value=0.59 Score=45.28 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=19.7
Q ss_pred CceEEEEccCCCChhHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.-.++++|.+|||||+|.+.+.+
T Consensus 9 ~~Ki~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 9 MLKCVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHHhh
Confidence 35689999999999999988764
No 420
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=77.53 E-value=0.29 Score=50.17 Aligned_cols=24 Identities=25% Similarity=0.504 Sum_probs=19.7
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHH
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
.+..+|.|+||+|||+|..+|...
T Consensus 97 ~~~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC-
T ss_pred cceEEEECCCCccHHHHHHhhccH
Confidence 356789999999999999988644
No 421
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=77.45 E-value=0.57 Score=45.02 Aligned_cols=22 Identities=18% Similarity=0.449 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.+.++|.||+|||+|..+|..
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
Confidence 4789999999999999998864
No 422
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=77.44 E-value=1.1 Score=46.14 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=29.3
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 850 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~s 850 (1165)
|+-++|.|--|+||||+|-.+|..+ |.....+|+-
T Consensus 8 p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 5788899999999999999888887 6677777754
No 423
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=77.32 E-value=0.86 Score=47.53 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=28.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh---CCCceEEeccc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 253 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s~ 253 (1165)
.-..++||||||||++|-.++... +...+.+|...
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~ 95 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH 95 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 578999999999999998888776 56667777653
No 424
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=77.22 E-value=0.81 Score=47.62 Aligned_cols=42 Identities=29% Similarity=0.370 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHc
Q psy2392 785 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 785 GQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+|..|++.|...+... .+.+.||.|.+|||||.+|-..+...
T Consensus 87 ~Q~~ai~ei~~d~~~~--------------~~m~rLL~GdvGSGKT~Va~~a~~~~ 128 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISE--------------KPMNRLLQGDVGSGKTVVAQLAILDN 128 (264)
T ss_dssp HHHHHHHHHHHHHHSS--------------SCCCCEEECCSSSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhcc--------------CcceeeeeccccccccHHHHHHHHHH
Confidence 5778888877776532 14678999999999999986665443
No 425
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.12 E-value=0.34 Score=46.41 Aligned_cols=21 Identities=29% Similarity=0.642 Sum_probs=17.4
Q ss_pred eEEEEccCCCChhHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
.++++|++|||||+|...+.+
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999876543
No 426
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.10 E-value=0.58 Score=45.52 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=18.6
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.+++.|++|||||+|...+.+.
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4889999999999998877643
No 427
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=76.94 E-value=0.97 Score=46.53 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHh---CCCceEEecc
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 252 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s 252 (1165)
.|+-++|.|--||||||+|-.+|..+ |....-+|+-
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 35788999999999999999999888 6777777754
No 428
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=76.90 E-value=0.44 Score=45.93 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.2
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
..+-|+|+|++|||+|..+|.
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~ 22 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVS 22 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSE
T ss_pred CeEEEECCCCCCHHHHHHHHh
Confidence 358899999999999998864
No 429
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.84 E-value=0.57 Score=45.36 Aligned_cols=20 Identities=25% Similarity=0.579 Sum_probs=18.7
Q ss_pred cEEEEEcCCCCCchHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRL 238 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~l 238 (1165)
-.+++.|.+|||||+|.+.+
T Consensus 3 iKivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 3 VKILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEEECSTTSSHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 47899999999999999998
No 430
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=76.84 E-value=0.97 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=28.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se 851 (1165)
.-..++||||||||++|-.++... +...+.+|...
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~ 95 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH 95 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 577899999999999998887766 55567777654
No 431
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=76.63 E-value=0.6 Score=48.18 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-+++|+|.||+|||++..+|..
T Consensus 33 l~I~LvG~tg~GKSSliN~ilg 54 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSIIG 54 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHHHHHHHhC
Confidence 5899999999999999998864
No 432
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=76.28 E-value=0.64 Score=45.23 Aligned_cols=24 Identities=46% Similarity=0.628 Sum_probs=19.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.+.|+++|||+|||.++-.++...
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~~ 47 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEYR 47 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHH
Confidence 478899999999998777666543
No 433
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=76.13 E-value=1.2 Score=44.06 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCCCeEEEec
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 849 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~ 849 (1165)
.+.++..|||+|||.++-.++..++.+.+.+-.
T Consensus 86 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp SEEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCcEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 456788999999999999999888777655443
No 434
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=76.09 E-value=0.6 Score=44.84 Aligned_cols=22 Identities=18% Similarity=0.449 Sum_probs=19.5
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.+.++|.||+|||+|..++.+
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
Confidence 5689999999999999988864
No 435
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.08 E-value=0.42 Score=45.75 Aligned_cols=20 Identities=45% Similarity=0.793 Sum_probs=9.1
Q ss_pred eEEEEccCCCChhHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA 837 (1165)
.+++.|.||||||+|...+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~ 27 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFS 27 (173)
T ss_dssp EEEEECCCCC----------
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 48899999999999987664
No 436
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=75.76 E-value=0.73 Score=48.37 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+--+|+||.|||||++..||+-.++
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHC
Confidence 5569999999999999999987764
No 437
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=75.61 E-value=0.51 Score=42.57 Aligned_cols=19 Identities=21% Similarity=0.072 Sum_probs=16.0
Q ss_pred CceEEEEccCCCChhHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIAR 834 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk 834 (1165)
..+.++.+|||+|||..+-
T Consensus 7 ~~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp TCEEEECCCTTSSTTTTHH
T ss_pred CCcEEEEcCCCCChhHHHH
Confidence 3688999999999997663
No 438
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=75.45 E-value=1.1 Score=43.64 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=26.7
Q ss_pred ceEEEEcc-CCCChhHHHHHHHHHc---CCCeEEEec
Q psy2392 817 KNILMIGP-TGVGKTEIARRLAKLS---NAPFIKIEA 849 (1165)
Q Consensus 817 ~~iLL~GP-pG~GKT~lAk~lA~~l---~~~fi~l~~ 849 (1165)
+.+++.|- ||||||+++-.||..+ |.....+|+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 56888898 6999999998888887 666666664
No 439
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=75.20 E-value=0.79 Score=46.68 Aligned_cols=24 Identities=25% Similarity=0.306 Sum_probs=20.2
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
+--+++||.|+|||++..+|+-.+
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh
Confidence 444899999999999999998644
No 440
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=74.64 E-value=0.42 Score=48.88 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=19.5
Q ss_pred CceEEEEccCCCChhHHHHHHHHHc
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.+..+|.|+||+|||+|..+|....
T Consensus 97 ~~~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC--
T ss_pred cceEEEECCCCccHHHHHHhhccHh
Confidence 3567899999999999998876443
No 441
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=74.47 E-value=0.78 Score=44.60 Aligned_cols=23 Identities=48% Similarity=0.658 Sum_probs=18.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.+.|+++|||+|||.++-.++..
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~ 46 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEY 46 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHHHH
Confidence 46889999999999877666543
No 442
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=74.45 E-value=0.9 Score=47.87 Aligned_cols=26 Identities=23% Similarity=0.371 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 217 TPKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 217 ~~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
+....++.||+|||||+|+..+++..
T Consensus 42 rGQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 42 RGQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp TTCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 45799999999999999999999866
No 443
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.19 E-value=0.81 Score=44.14 Aligned_cols=22 Identities=18% Similarity=0.383 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-.+++.|++|||||+|...+..
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 5899999999999999987754
No 444
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.83 E-value=0.88 Score=46.95 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=21.2
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
++..+|+||.|+|||++..||+-.+
T Consensus 23 ~~~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 23 EGINLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 3567899999999999999997554
No 445
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.37 E-value=0.97 Score=47.36 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=21.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+--+|+||.|||||++..||+=.++
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHC
Confidence 4558999999999999999987764
No 446
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=73.25 E-value=0.78 Score=45.96 Aligned_cols=23 Identities=26% Similarity=0.593 Sum_probs=20.4
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
..++|.|++|+|||+|.+.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 68999999999999999988643
No 447
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.19 E-value=0.89 Score=46.28 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=19.3
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
+--+++||.|+|||++..+|+-.
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHH
Confidence 44489999999999999998753
No 448
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.08 E-value=0.88 Score=46.96 Aligned_cols=24 Identities=25% Similarity=0.328 Sum_probs=20.3
Q ss_pred CceEEEEccCCCChhHHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
++..+|+||.|+|||++..+|.-.
T Consensus 23 ~~~~vi~G~NgsGKTtileAI~~~ 46 (369)
T g1ii8.1 23 EGINLIIGQNGSGKSSLLDAILVG 46 (369)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHH
Confidence 456789999999999999998643
No 449
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=72.73 E-value=1.3 Score=43.43 Aligned_cols=18 Identities=50% Similarity=0.706 Sum_probs=16.0
Q ss_pred ceEEEEccCCCChhHHHH
Q psy2392 817 KNILMIGPTGVGKTEIAR 834 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk 834 (1165)
+++++.+|||+|||+.+-
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 679999999999998874
No 450
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=72.42 E-value=0.83 Score=47.07 Aligned_cols=24 Identities=29% Similarity=0.487 Sum_probs=20.9
Q ss_pred CceEEEEccCCCChhHHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
+-+++|+|.||+|||++..+|...
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Confidence 368999999999999999988653
No 451
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.34 E-value=0.88 Score=43.90 Aligned_cols=20 Identities=25% Similarity=0.579 Sum_probs=18.3
Q ss_pred ceEEEEccCCCChhHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRL 836 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~l 836 (1165)
-.++|.|.+|||||+|.+.+
T Consensus 3 iKivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 3 VKILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEEECSTTSSHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 35899999999999999988
No 452
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.12 E-value=0.91 Score=43.55 Aligned_cols=24 Identities=17% Similarity=0.462 Sum_probs=20.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
-.+++.|.+|||||+|.+.+...-
T Consensus 3 ~Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 3 LKLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHhCCC
Confidence 378999999999999999997654
No 453
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=71.76 E-value=1.7 Score=43.63 Aligned_cols=24 Identities=29% Similarity=0.475 Sum_probs=19.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.++++.+|||+|||+.+-..+..+
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~ 82 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFL 82 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHH
Confidence 689999999999998776655444
No 454
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=71.57 E-value=0.28 Score=46.82 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=21.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+-.+|+||.|+|||++..||.-.+.
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhc
Confidence 4567889999999999999998874
No 455
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=71.06 E-value=1.9 Score=43.16 Aligned_cols=24 Identities=29% Similarity=0.475 Sum_probs=19.1
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.++++.+|||+|||+.+-..+-.+
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~ 82 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFL 82 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHH
Confidence 689999999999998776555443
No 456
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.89 E-value=1.1 Score=43.13 Aligned_cols=22 Identities=18% Similarity=0.383 Sum_probs=19.0
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-.+++.|++|||||+|...+..
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 5789999999999999887654
No 457
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=69.59 E-value=3.3 Score=45.58 Aligned_cols=53 Identities=28% Similarity=0.302 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCC
Q psy2392 784 IGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851 (1165)
Q Consensus 784 vGQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se 851 (1165)
+.|.+|++.|...+... .+..+|.|-+|+|||.++-.+++..+.|.+.+..+.
T Consensus 14 gDQP~aI~~l~~~l~~g---------------~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 14 GDQPQAIAKLVDGLRRG---------------VKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp TTHHHHHHHHHHHHHHT---------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred CCCHHHHHHHHHHHhcC---------------CCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 35778888888888643 367889999999999999999999999988776654
No 458
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=68.96 E-value=0.67 Score=45.56 Aligned_cols=18 Identities=50% Similarity=0.706 Sum_probs=16.2
Q ss_pred cEEEEEcCCCCCchHHHH
Q psy2392 219 KNILMIGPTGVGKTEIAR 236 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk 236 (1165)
+++++.+|||+|||+.|-
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 689999999999999874
No 459
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=68.76 E-value=1.2 Score=44.64 Aligned_cols=23 Identities=26% Similarity=0.593 Sum_probs=20.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
..++|.|++|+|||++.+.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999988643
No 460
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=68.38 E-value=1.5 Score=47.00 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=23.2
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
-.+.|-|+-||||||+++.|++.++
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEEECCccCCHHHHHHHHHHHhc
Confidence 5789999999999999999999984
No 461
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=67.76 E-value=0.41 Score=45.58 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=21.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+-.+|+||.|+|||++..+|.-.+.
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhc
Confidence 4457889999999999999998774
No 462
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.51 E-value=1.4 Score=42.10 Aligned_cols=23 Identities=17% Similarity=0.512 Sum_probs=20.1
Q ss_pred eEEEEccCCCChhHHHHHHHHHc
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
.+++.|.+|||||+|.+.+..--
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999886554
No 463
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=66.78 E-value=1.4 Score=47.16 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=22.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
-.|.|-|+-||||||+++.|++.++
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEEECCccCCHHHHHHHHHHHhc
Confidence 4678889999999999999999985
No 464
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=65.19 E-value=1.5 Score=41.71 Aligned_cols=23 Identities=22% Similarity=0.553 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCchHHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKL 241 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~ 241 (1165)
-.++|.|..|||||++.+.+...
T Consensus 3 ~KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 3 VKLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHhhC
Confidence 37899999999999999987543
No 465
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=64.69 E-value=2.7 Score=42.80 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=28.2
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh---CCCceEEecc
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 252 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s 252 (1165)
+-+++.|--||||||++-.||..+ |.....+|+-
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 577888999999999988888777 6777777765
No 466
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=64.54 E-value=1.4 Score=45.69 Aligned_cols=25 Identities=24% Similarity=0.500 Sum_probs=20.9
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+--+|+||.|||||++-.||+-.++
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHHTSC
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhC
Confidence 3568999999999999999976553
No 467
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=64.08 E-value=3.2 Score=42.15 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=27.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc---CCCeEEEecCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS---NAPFIKIEATK 851 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~se 851 (1165)
+-+++.|--||||||++-.||..+ |.....+|+-.
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp 58 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 58 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 667888999999999887777766 66777777753
No 468
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=63.86 E-value=2.2 Score=44.81 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=21.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
...+++||+|||||+|+..+++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CeeeEeCCCCCCHHHHHHHHHHHH
Confidence 678999999999999999999866
No 469
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=63.38 E-value=3.7 Score=45.17 Aligned_cols=52 Identities=29% Similarity=0.336 Sum_probs=43.4
Q ss_pred cchhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccc
Q psy2392 187 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 253 (1165)
Q Consensus 187 GQ~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~ 253 (1165)
-|..|++.+...+... .+..++.|-+|+|||.+.-.+++..+.|.+.+..+.
T Consensus 15 DQP~aI~~l~~~l~~g---------------~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 15 DQPQAIAKLVDGLRRG---------------VKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp THHHHHHHHHHHHHHT---------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred CCHHHHHHHHHHHhcC---------------CCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 3777888888888653 267889999999999999999999999998887654
No 470
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=62.37 E-value=1.8 Score=43.33 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
.-.++.|..|+|||||.+.+.+..
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CEEEEeeCCCCCHHHHHHHHHhcC
Confidence 578999999999999998887754
No 471
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=62.02 E-value=1.6 Score=45.21 Aligned_cols=25 Identities=24% Similarity=0.500 Sum_probs=20.4
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+--+|+||.|||||++-.|++=.++
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHHTSC
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhC
Confidence 3458899999999999999866553
No 472
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=61.98 E-value=1.9 Score=46.18 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=23.6
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNAP 245 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~~ 245 (1165)
-.+.|-|+-|+||||+++.|++.+...
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~l~~~ 32 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHHFAIT 32 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHTTTTS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhhc
Confidence 368899999999999999999998543
No 473
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.49 E-value=3.3 Score=45.23 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=20.7
Q ss_pred CcEEEEEcCCCCCchHHHHHHHH
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
+-++.++|.||+|||+|..+|-.
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 46899999999999999998864
No 474
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=60.42 E-value=2.9 Score=42.41 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=27.4
Q ss_pred EEEEEcCCCCCchHHHHHHHHHh---CCCceEEecc
Q psy2392 220 NILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 252 (1165)
Q Consensus 220 ~~Ll~GPpG~GKT~lAk~lA~~l---~~~~i~ld~s 252 (1165)
.+.++|-=||||||+|-.||..+ |....-+|+-
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 46678999999999999988887 6777777764
No 475
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=60.21 E-value=1.9 Score=41.37 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCCchHHHHHHHH
Q psy2392 219 KNILMIGPTGVGKTEIARRLAK 240 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~ 240 (1165)
-++-++|+|++|||||.++|.+
T Consensus 6 inIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 6 INLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEEeCCCCcHHHHHHHHHH
Confidence 4789999999999999999864
No 476
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.91 E-value=5.2 Score=43.54 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=20.7
Q ss_pred CceEEEEccCCCChhHHHHHHHH
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
+-++.++|.||+|||+|..+|-.
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 47899999999999999999864
No 477
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=59.61 E-value=2.1 Score=40.99 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.6
Q ss_pred ceEEEEccCCCChhHHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLAK 838 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~ 838 (1165)
-++-++|+|++|||||.++|.+
T Consensus 6 inIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 6 INLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEEeCCCCcHHHHHHHHHH
Confidence 4789999999999999999864
No 478
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=59.57 E-value=2.3 Score=42.63 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=20.9
Q ss_pred ceEEEEccCCCChhHHHHHHHHHc
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLS 840 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l 840 (1165)
+-.++.|..|+||||+.+.+.+..
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CEEEEeeCCCCCHHHHHHHHHhcC
Confidence 568999999999999998887754
No 479
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=59.13 E-value=2.2 Score=45.64 Aligned_cols=25 Identities=28% Similarity=0.377 Sum_probs=22.3
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
.|.+-|+-|+||||+++.|++.++.
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 4778899999999999999999854
No 480
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.66 E-value=2.4 Score=40.22 Aligned_cols=22 Identities=23% Similarity=0.604 Sum_probs=18.9
Q ss_pred eEEEEccCCCChhHHHHHHHHH
Q psy2392 818 NILMIGPTGVGKTEIARRLAKL 839 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~ 839 (1165)
.++|.|..|||||++.+.+...
T Consensus 4 KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 5899999999999999887543
No 481
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=57.79 E-value=4 Score=41.33 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=27.0
Q ss_pred eEEEEccCCCChhHHHHHHHHHc---CCCeEEEecC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLS---NAPFIKIEAT 850 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l---~~~fi~l~~s 850 (1165)
.|.++|-=||||||+|--||..+ |.....+|+.
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 46678999999999998888777 6777778874
No 482
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.78 E-value=2.9 Score=44.82 Aligned_cols=25 Identities=24% Similarity=0.476 Sum_probs=21.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+--+++||.|+|||++..||+=.||
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4458999999999999999986664
No 483
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=57.76 E-value=2.6 Score=43.95 Aligned_cols=25 Identities=32% Similarity=0.377 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCCchHHHHHHHHHh
Q psy2392 218 PKNILMIGPTGVGKTEIARRLAKLS 242 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~lAk~lA~~l 242 (1165)
...++++|++|||||+|+..++...
T Consensus 68 GQr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 68 GGKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp TCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCHHHHHHHHHHHH
Confidence 4689999999999999999998774
No 484
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=56.42 E-value=7.2 Score=42.57 Aligned_cols=52 Identities=25% Similarity=0.398 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHHHhHhhhhcccCCCCCCCCCceEEEEccCCCChhHHHHHHHHHcCCCeEEEecCC
Q psy2392 785 GQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851 (1165)
Q Consensus 785 GQ~~ak~~l~~~i~~~~~r~~l~~~~~~~~~~~~iLL~GPpG~GKT~lAk~lA~~l~~~fi~l~~se 851 (1165)
.|.+|++.|...+... ....+|.|.+|++|+.++-++++..+.|.+.+..++
T Consensus 12 dqp~aI~~l~~~L~~g---------------~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~ 63 (408)
T d1c4oa1 12 DQPKAIAGLVEALRDG---------------ERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNK 63 (408)
T ss_dssp THHHHHHHHHHHHHTT---------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSH
T ss_pred CCHHHHHHHHHHHhcC---------------CCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 4667788887777632 245789999999999999999999999988776553
No 485
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=55.24 E-value=2.3 Score=45.43 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=20.3
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhCC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSNA 244 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~~ 244 (1165)
-.+.|-|+-|+||||+++.|++.++.
T Consensus 5 lrI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 5 LRVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEEECSCTTSSHHHHHHHHTC----
T ss_pred eEEEEECCcCCCHHHHHHHHHHHhCC
Confidence 35889999999999999999988843
No 486
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=54.46 E-value=4.4 Score=39.27 Aligned_cols=21 Identities=33% Similarity=0.427 Sum_probs=17.2
Q ss_pred ceEEEEccCCCChhHHHHHHH
Q psy2392 817 KNILMIGPTGVGKTEIARRLA 837 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA 837 (1165)
.++++.-|||+|||..+....
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~ 61 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPA 61 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhhhh
Confidence 579999999999998765433
No 487
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=53.21 E-value=5.3 Score=39.04 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=25.8
Q ss_pred EEEEE-cCCCCCchHHHHHHHHHh---CCCceEEecc
Q psy2392 220 NILMI-GPTGVGKTEIARRLAKLS---NAPFIKIEAT 252 (1165)
Q Consensus 220 ~~Ll~-GPpG~GKT~lAk~lA~~l---~~~~i~ld~s 252 (1165)
.+.++ |-.|+|||++|-.||..+ +....-+|+-
T Consensus 3 vIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 34444 889999999999999888 6777777763
No 488
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=52.87 E-value=4 Score=43.58 Aligned_cols=25 Identities=24% Similarity=0.476 Sum_probs=20.6
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSN 841 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~ 841 (1165)
+--+++||.|+|||++..||+=.+|
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3458899999999999999975554
No 489
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=52.73 E-value=2.3 Score=45.14 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=15.1
Q ss_pred ceEEEEccCCCChhHHH
Q psy2392 817 KNILMIGPTGVGKTEIA 833 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lA 833 (1165)
...||+|.+|||||||.
T Consensus 15 ~valffGLSGTGKTTLs 31 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLS 31 (318)
T ss_dssp CEEEEEECTTSCHHHHT
T ss_pred CEEEEEccCCCCccccc
Confidence 46799999999999985
No 490
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=52.64 E-value=4 Score=42.14 Aligned_cols=26 Identities=27% Similarity=0.526 Sum_probs=23.0
Q ss_pred ceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 817 KNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
+++.+.|..|+|||||+.++.-..+.
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g~ 28 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTGA 28 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTTS
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcCC
Confidence 68999999999999999999777664
No 491
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=51.56 E-value=2.6 Score=44.50 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=15.0
Q ss_pred ceEEEEccCCCChhHHH
Q psy2392 817 KNILMIGPTGVGKTEIA 833 (1165)
Q Consensus 817 ~~iLL~GPpG~GKT~lA 833 (1165)
...||+|.+|||||||.
T Consensus 15 ~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 45699999999999986
No 492
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=50.34 E-value=2.9 Score=44.60 Aligned_cols=25 Identities=32% Similarity=0.589 Sum_probs=19.4
Q ss_pred eEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 818 NILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 818 ~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
.|.+-|+-|+||||+++.|++.++.
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCC
Confidence 4778899999999999999988753
No 493
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=49.70 E-value=2.9 Score=44.22 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=15.2
Q ss_pred cEEEEEcCCCCCchHHH
Q psy2392 219 KNILMIGPTGVGKTEIA 235 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lA 235 (1165)
...||+|.+|||||||.
T Consensus 15 ~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 46799999999999977
No 494
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=49.60 E-value=2.9 Score=44.33 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=15.6
Q ss_pred cEEEEEcCCCCCchHHHH
Q psy2392 219 KNILMIGPTGVGKTEIAR 236 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk 236 (1165)
...||+|.+|||||||.-
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 468999999999999763
No 495
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=49.59 E-value=4.6 Score=41.89 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=24.0
Q ss_pred CceEEEEccCCCChhHHHHHHHHHcCC
Q psy2392 816 PKNILMIGPTGVGKTEIARRLAKLSNA 842 (1165)
Q Consensus 816 ~~~iLL~GPpG~GKT~lAk~lA~~l~~ 842 (1165)
.+|+.++|..|+|||+|+.++....+.
T Consensus 6 iRni~i~gh~~~GKTtL~e~ll~~~g~ 32 (276)
T d2bv3a2 6 LRNIGIAAHIDAGKTTTTERILYYTGR 32 (276)
T ss_dssp EEEEEEEECTTSCHHHHHHHHHHHHTS
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhcCc
Confidence 378999999999999999999887764
No 496
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=49.43 E-value=7 Score=38.09 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=26.4
Q ss_pred EEEEE-cCCCCCchHHHHHHHHHh---CCCceEEecc
Q psy2392 220 NILMI-GPTGVGKTEIARRLAKLS---NAPFIKIEAT 252 (1165)
Q Consensus 220 ~~Ll~-GPpG~GKT~lAk~lA~~l---~~~~i~ld~s 252 (1165)
.+.++ +-.|||||++|-.||..+ |.+..-+|+.
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45566 668999999999999887 7788888863
No 497
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=48.93 E-value=4.6 Score=41.67 Aligned_cols=25 Identities=24% Similarity=0.516 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+++.+.|..|+|||||+.+|....+
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 6899999999999999999977665
No 498
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=48.32 E-value=9.5 Score=41.58 Aligned_cols=51 Identities=25% Similarity=0.405 Sum_probs=40.8
Q ss_pred chhhHHHHHHHHHhhhhhhcccCCCCCccCCcEEEEEcCCCCCchHHHHHHHHHhCCCceEEeccc
Q psy2392 188 QNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 253 (1165)
Q Consensus 188 Q~~a~~~l~~ai~~~~~r~~l~~~~~~~~~~~~~Ll~GPpG~GKT~lAk~lA~~l~~~~i~ld~s~ 253 (1165)
|..|++.+.+.+... ....++.|.+|++|+.++-++++.++.|++.+..+.
T Consensus 13 qp~aI~~l~~~L~~g---------------~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~ 63 (408)
T d1c4oa1 13 QPKAIAGLVEALRDG---------------ERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNK 63 (408)
T ss_dssp HHHHHHHHHHHHHTT---------------CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSH
T ss_pred CHHHHHHHHHHHhcC---------------CCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 566777777777542 246799999999999999999999999998877654
No 499
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=48.25 E-value=4.7 Score=41.83 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCchHHHHHHHHHhC
Q psy2392 219 KNILMIGPTGVGKTEIARRLAKLSN 243 (1165)
Q Consensus 219 ~~~Ll~GPpG~GKT~lAk~lA~~l~ 243 (1165)
+++.++|..|+|||+|+.+|....+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 6999999999999999999988775
No 500
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=47.88 E-value=4.8 Score=41.00 Aligned_cols=16 Identities=31% Similarity=0.347 Sum_probs=14.2
Q ss_pred CcEEEEEcCCCCCchH
Q psy2392 218 PKNILMIGPTGVGKTE 233 (1165)
Q Consensus 218 ~~~~Ll~GPpG~GKT~ 233 (1165)
....++.+|||+|||+
T Consensus 9 ~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 9 KRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TCEEEECCCTTSSTTT
T ss_pred CCcEEEEECCCCCHHH
Confidence 3689999999999995
Done!