Your job contains 1 sequence.
>psy2392
MHKPRNVSSAKDSGMEKFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQN
QVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANR
ETTLIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSE
LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK
LSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVI
DILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPP
GMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQN
GIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGA
FHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFV
DDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNISLLVDADYVNSRLGDL
SINEDLSRYDSGMEKFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQV
LAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRET
TLIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELD
KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS
NAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDI
LVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGM
EEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGI
IFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFH
LAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDD
GIQRLAEIAYCINERTENIVIIYHY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2392
(1165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 1369 6.3e-140 1
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 1347 1.3e-137 1
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 1346 1.7e-137 1
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 1334 3.2e-136 1
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 1319 1.2e-134 1
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 1299 1.6e-132 1
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 1299 1.6e-132 1
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 1162 5.4e-118 1
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 1138 1.9e-115 1
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 1105 5.9e-112 1
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 1077 5.5e-109 1
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 1062 2.1e-107 1
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 1000 7.9e-101 1
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 916 6.3e-92 1
TIGR_CMR|CBU_2011 - symbol:CBU_2011 "protease HslVU, subu... 465 5.8e-43 1
TIGR_CMR|SO_4162 - symbol:SO_4162 "ATP-dependent protease... 450 2.3e-41 1
TIGR_CMR|CPS_4369 - symbol:CPS_4369 "ATP-dependent protea... 448 3.8e-41 1
UNIPROTKB|Q9KNQ6 - symbol:hslV "ATP-dependent protease su... 432 2.0e-39 1
TIGR_CMR|VC_2675 - symbol:VC_2675 "protease HslVU, subuni... 432 2.0e-39 1
UNIPROTKB|P43772 - symbol:hslV "ATP-dependent protease su... 429 4.1e-39 1
UNIPROTKB|P0A7B8 - symbol:hslV species:83333 "Escherichia... 428 5.3e-39 1
UNIPROTKB|Q3AB73 - symbol:hslV "ATP-dependent protease su... 421 3.0e-38 1
TIGR_CMR|CHY_1791 - symbol:CHY_1791 "ATP-dependent protea... 421 3.0e-38 1
DICTYBASE|DDB_G0269282 - symbol:DDB_G0269282 "ATP-depende... 368 1.4e-32 1
TIGR_CMR|NSE_0176 - symbol:NSE_0176 "heat shock protein H... 365 2.9e-32 1
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 216 1.2e-31 3
GENEDB_PFALCIPARUM|PFL1465c - symbol:PFL1465c "heat shock... 344 5.1e-30 1
UNIPROTKB|Q8I5B6 - symbol:HslV "Heat shock protein hslv" ... 344 5.1e-30 1
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 242 2.7e-27 2
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 156 6.3e-27 4
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 230 5.6e-25 2
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 225 1.3e-24 2
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 135 6.8e-24 5
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 141 8.7e-24 4
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 140 1.4e-23 4
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 231 1.6e-23 2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 206 1.7e-23 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 219 2.6e-23 2
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 142 3.8e-23 3
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 141 3.8e-23 3
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 141 3.8e-23 3
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 140 4.1e-23 3
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 140 4.5e-23 3
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 229 4.8e-23 2
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 140 4.9e-23 3
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 140 4.9e-23 3
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 218 1.1e-22 2
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 220 1.1e-22 2
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 228 1.1e-22 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 215 2.0e-22 2
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 215 2.0e-22 2
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 234 4.4e-22 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 216 1.6e-21 2
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 209 2.5e-21 2
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 155 5.6e-19 3
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 183 2.0e-18 2
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 143 2.9e-17 3
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 157 1.4e-16 2
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 140 2.1e-16 3
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 157 7.1e-16 2
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 141 8.8e-14 3
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 136 1.6e-06 2
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 136 1.6e-06 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 86 3.0e-06 4
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 86 7.3e-06 4
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 90 1.3e-05 4
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 90 1.3e-05 4
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 81 1.9e-05 4
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 83 0.00011 3
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 97 0.00019 3
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 97 0.00019 3
TAIR|locus:2043619 - symbol:AT2G45500 species:3702 "Arabi... 105 0.00027 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 99 0.00038 3
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 95 0.00040 3
FB|FBgn0031519 - symbol:CG3326 species:7227 "Drosophila m... 98 0.00046 3
TIGR_CMR|CBU_1196 - symbol:CBU_1196 "ATP-dependent Clp pr... 106 0.00049 3
TIGR_CMR|SPO_3169 - symbol:SPO_3169 "ATP-dependent Clp pr... 114 0.00064 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 76 0.00081 4
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 76 0.00081 4
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 76 0.00081 4
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 96 0.00086 3
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 76 0.00088 4
TIGR_CMR|CBU_0094 - symbol:CBU_0094 "clpB protein" specie... 109 0.00094 3
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 88 0.0010 3
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 88 0.0010 3
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
Identities = 268/437 (61%), Positives = 353/437 (80%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSELDK++IGQ+ AKR+VAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R I K R RAE+ A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 355
E+R++D+L+P + + T+ + RQ FRK+LREG LD+KEIEI+L +E
Sbjct: 128 EERILDVLIPPAKNNWGQTEQQQEPS--AARQAFRKKLREGQLDDKEIEIDLAAAPMGVE 185
Query: 356 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 415
IM+PPGMEEMT+Q+++MF +G ++K RK+KI++A+KLLI+EEA KL+N +E++Q AI+
Sbjct: 186 IMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAID 245
Query: 416 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 475
VEQ+GI+F+DEIDKI R +++ D+SR GVQRDLLPLVEG TV+TK+G++KTDHILF
Sbjct: 246 AVEQHGIVFIDEIDKICKRG-ESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILF 304
Query: 476 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 535
IASGAF +AKPSDLIPELQGR PIRVEL +L+ SDF RI+T N +T QY+AL+ATEG+
Sbjct: 305 IASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGV 364
Query: 536 KIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDADY 592
IEF D GI+R+AE A+ +NE TENIGARRL+T +E+L+EE+S++++++S + +DADY
Sbjct: 365 NIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADY 424
Query: 593 VNSRLGDLSINEDLSRY 609
V+ L L +EDLSR+
Sbjct: 425 VSKHLDALVADEDLSRF 441
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 244/386 (63%), Positives = 313/386 (81%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSELDK++IGQ+ AKR+VAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R I K R RAE+ A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 953
E+R++D+L+P + + T+ + RQ FRK+LREG LD+KEIEI+L +E
Sbjct: 128 EERILDVLIPPAKNNWGQTEQQQEPS--AARQAFRKKLREGQLDDKEIEIDLAAAPMGVE 185
Query: 954 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 1013
IM+PPGMEEMT+Q+++MF +G ++K RK+KI++A+KLLI+EEA KL+N +E++Q AI+
Sbjct: 186 IMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAID 245
Query: 1014 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 1073
VEQ+GI+F+DEIDKI R +++ D+SR GVQRDLLPLVEG TV+TK+G++KTDHILF
Sbjct: 246 AVEQHGIVFIDEIDKICKRG-ESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILF 304
Query: 1074 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 1133
IASGAF +AKPSDLIPELQGR PIRVEL +L+ SDF RI+T N +T QY+AL+ATEG+
Sbjct: 305 IASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGV 364
Query: 1134 KIEFVDDGIQRLAEIAYCINERTENI 1159
IEF D GI+R+AE A+ +NE TENI
Sbjct: 365 NIEFTDSGIKRIAEAAWQVNESTENI 390
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 267/439 (60%), Positives = 355/439 (80%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R+ EI K R RAED A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHM- 354
E+R++D L+P + N + STRQ FRK+LREG LD+KEIEI+++ G M
Sbjct: 128 EERILDALLPPAK--NQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEIDVS-AGVSMG 184
Query: 355 -EIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKA 413
EIM+PPGMEEMT Q++++F +G+ + K RK+KI++A+K LID+EA KL+N +E++QKA
Sbjct: 185 VEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKA 244
Query: 414 INNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHI 473
I+ VEQNGI+F+DEIDKI + + + D+SR GVQRDLLPLVEG+TV+TK+G++KTDHI
Sbjct: 245 IDAVEQNGIVFIDEIDKIC-KKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHI 303
Query: 474 LFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATE 533
LFIASGAF +A+PSDLIPELQGR PIRVEL +LS +DF RI+T + LT+QY+AL+ATE
Sbjct: 304 LFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATE 363
Query: 534 GIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDA 590
G+ I F D ++++AE A+ +NE+TENIGARRL+T ME+L++++SF++++++ + +DA
Sbjct: 364 GVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDA 423
Query: 591 DYVNSRLGDLSINEDLSRY 609
YV LG++ NEDLSR+
Sbjct: 424 AYVADALGEVVENEDLSRF 442
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 244/388 (62%), Positives = 315/388 (81%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R+ EI K R RAED A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHM- 952
E+R++D L+P + N + STRQ FRK+LREG LD+KEIEI+++ G M
Sbjct: 128 EERILDALLPPAK--NQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEIDVS-AGVSMG 184
Query: 953 -EIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKA 1011
EIM+PPGMEEMT Q++++F +G+ + K RK+KI++A+K LID+EA KL+N +E++QKA
Sbjct: 185 VEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKA 244
Query: 1012 INNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHI 1071
I+ VEQNGI+F+DEIDKI + + + D+SR GVQRDLLPLVEG+TV+TK+G++KTDHI
Sbjct: 245 IDAVEQNGIVFIDEIDKIC-KKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHI 303
Query: 1072 LFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATE 1131
LFIASGAF +A+PSDLIPELQGR PIRVEL +LS +DF RI+T + LT+QY+AL+ATE
Sbjct: 304 LFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATE 363
Query: 1132 GIKIEFVDDGIQRLAEIAYCINERTENI 1159
G+ I F D ++++AE A+ +NE+TENI
Sbjct: 364 GVNIAFTTDAVKKIAEAAFRVNEKTENI 391
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 267/437 (61%), Positives = 350/437 (80%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIV ELD ++IGQ +AKR+VA+ALRNRWRR Q+ +QE+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVHELDAHIIGQKKAKRSVAVALRNRWRRMQLDADFRQEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+NAPFIK+EATKFTEVGYVG++V+ IIRDL DI+IK TRE ++ K R RAE+ A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDLTDIAIKLTREQQMGKCRQRAEEHA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 355
E+R++D L+P K K+ D+ +TRQIFRK+LRE LD+KEI+I++ +E
Sbjct: 128 EERILDALLP-KPKN----DWDDSDSNSNTRQIFRKKLRESQLDDKEIDIDVAQPQIGIE 182
Query: 356 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 415
IMSPPGMEEMT Q++++F +G K RK+KI+EA KLLI+EEA KL+N+++++++AI
Sbjct: 183 IMSPPGMEEMTNQLQSLFKNMGQAPAKRRKMKIKEAFKLLIEEEAAKLVNQEDLKEQAIE 242
Query: 416 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 475
VEQNGI+FLDEIDKI R + + D+SR GVQRDLLPLVEG TV TK+G++KTDHILF
Sbjct: 243 LVEQNGIVFLDEIDKICKRG-ETSGPDVSREGVQRDLLPLVEGCTVTTKHGMVKTDHILF 301
Query: 476 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 535
IASGAF ++KPSDLIPELQGR PIRVELD+L+ DF RI+T + LT+QY AL+ATEG+
Sbjct: 302 IASGAFQMSKPSDLIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGV 361
Query: 536 KIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNN---ISLLVDADY 592
IEF + GI+ +A+ A+ +NERTENIGARRL+T MEKL+E++S+ +++ S ++DADY
Sbjct: 362 IIEFTESGIESIAKAAWQVNERTENIGARRLHTVMEKLMEDISYEASDKSGSSFVIDADY 421
Query: 593 VNSRLGDLSINEDLSRY 609
V++ L +L +EDLSR+
Sbjct: 422 VSAHLDNLVQDEDLSRF 438
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 242/386 (62%), Positives = 310/386 (80%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIV ELD ++IGQ +AKR+VA+ALRNRWRR Q+ +QE+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVHELDAHIIGQKKAKRSVAVALRNRWRRMQLDADFRQEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+NAPFIK+EATKFTEVGYVG++V+ IIRDL DI+IK TRE ++ K R RAE+ A
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDLTDIAIKLTREQQMGKCRQRAEEHA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 953
E+R++D L+P K K+ D+ +TRQIFRK+LRE LD+KEI+I++ +E
Sbjct: 128 EERILDALLP-KPKN----DWDDSDSNSNTRQIFRKKLRESQLDDKEIDIDVAQPQIGIE 182
Query: 954 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 1013
IMSPPGMEEMT Q++++F +G K RK+KI+EA KLLI+EEA KL+N+++++++AI
Sbjct: 183 IMSPPGMEEMTNQLQSLFKNMGQAPAKRRKMKIKEAFKLLIEEEAAKLVNQEDLKEQAIE 242
Query: 1014 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 1073
VEQNGI+FLDEIDKI R + + D+SR GVQRDLLPLVEG TV TK+G++KTDHILF
Sbjct: 243 LVEQNGIVFLDEIDKICKRG-ETSGPDVSREGVQRDLLPLVEGCTVTTKHGMVKTDHILF 301
Query: 1074 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 1133
IASGAF ++KPSDLIPELQGR PIRVELD+L+ DF RI+T + LT+QY AL+ATEG+
Sbjct: 302 IASGAFQMSKPSDLIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGV 361
Query: 1134 KIEFVDDGIQRLAEIAYCINERTENI 1159
IEF + GI+ +A+ A+ +NERTENI
Sbjct: 362 IIEFTESGIESIAKAAWQVNERTENI 387
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 266/441 (60%), Positives = 345/441 (78%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIV+ELDK++IGQN AKRAVAIALRNRWRR Q+ L++EI PKNILMIGPTGVGKTEIA
Sbjct: 7 EIVAELDKFIIGQNDAKRAVAIALRNRWRRMQLGEELRREIFPKNILMIGPTGVGKTEIA 66
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRL+ L+ APF+KIEATKFTEVGYVGRDV++IIRDL+D+++K TRE I +V++ AE+AA
Sbjct: 67 RRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLVDVAVKMTREKAIRQVKSLAEEAA 126
Query: 296 EDRVIDILVPSK----EKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG 351
E+RV+D L+P + + +TRQ+FRK+LR G LD+KEIE+E++
Sbjct: 127 EERVLDALIPPARGGFQGEPTAEEKPTEKKESATRQLFRKKLRNGELDDKEIEVEVS-AH 185
Query: 352 PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQ 411
P EIM PPGMEEM +Q++ + S + + R K+R++K+++A+++L +EEA KL++ED+I+
Sbjct: 186 PSFEIMGPPGMEEMVSQLQGIMSSMSSRRSKSRRLKVKDALRILGEEEAAKLVDEDQIKS 245
Query: 412 KAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTD 471
A+ +VEQNGI+F+DEIDKI R D+SR GVQRDLLPLVEG+TV TKYG++KTD
Sbjct: 246 TALASVEQNGIVFIDEIDKIVKREGAVG-ADVSREGVQRDLLPLVEGSTVFTKYGMVKTD 304
Query: 472 HILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLA 531
HILFIASGAFH+AKPSDL+PELQGRFPIRVEL +L+ DF RI+T LT+QY LL
Sbjct: 305 HILFIASGAFHIAKPSDLVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLK 364
Query: 532 TEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNI---SLLV 588
TE + F DGI+RLAEIAY +N+R+ENIGARRL+T ME+LLEEVSF + + S+ +
Sbjct: 365 TENFGLSFTKDGIKRLAEIAYQVNDRSENIGARRLHTIMERLLEEVSFEATDKQGESITI 424
Query: 589 DADYVNSRLGDLSINEDLSRY 609
DADYVN +L L+ +EDLSRY
Sbjct: 425 DADYVNKQLKKLAEDEDLSRY 445
Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
Identities = 236/390 (60%), Positives = 306/390 (78%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIV+ELDK++IGQN AKRAVAIALRNRWRR Q+ L++EI PKNILMIGPTGVGKTEIA
Sbjct: 7 EIVAELDKFIIGQNDAKRAVAIALRNRWRRMQLGEELRREIFPKNILMIGPTGVGKTEIA 66
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRL+ L+ APF+KIEATKFTEVGYVGRDV++IIRDL+D+++K TRE I +V++ AE+AA
Sbjct: 67 RRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLVDVAVKMTREKAIRQVKSLAEEAA 126
Query: 894 EDRVIDILVPSK----EKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG 949
E+RV+D L+P + + +TRQ+FRK+LR G LD+KEIE+E++
Sbjct: 127 EERVLDALIPPARGGFQGEPTAEEKPTEKKESATRQLFRKKLRNGELDDKEIEVEVS-AH 185
Query: 950 PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQ 1009
P EIM PPGMEEM +Q++ + S + + R K+R++K+++A+++L +EEA KL++ED+I+
Sbjct: 186 PSFEIMGPPGMEEMVSQLQGIMSSMSSRRSKSRRLKVKDALRILGEEEAAKLVDEDQIKS 245
Query: 1010 KAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTD 1069
A+ +VEQNGI+F+DEIDKI R D+SR GVQRDLLPLVEG+TV TKYG++KTD
Sbjct: 246 TALASVEQNGIVFIDEIDKIVKREGAVG-ADVSREGVQRDLLPLVEGSTVFTKYGMVKTD 304
Query: 1070 HILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLA 1129
HILFIASGAFH+AKPSDL+PELQGRFPIRVEL +L+ DF RI+T LT+QY LL
Sbjct: 305 HILFIASGAFHIAKPSDLVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLK 364
Query: 1130 TEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
TE + F DGI+RLAEIAY +N+R+ENI
Sbjct: 365 TENFGLSFTKDGIKRLAEIAYQVNDRSENI 394
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 259/437 (59%), Positives = 345/437 (78%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIV ELD +++GQ+ AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVHELDSHIVGQSDAKRAVAIALRNRWRRMQLDKDLRNEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL++APFIK+EATKFTEVGYVG++V+TIIRDL D++IK +E E+++V+ AE+AA
Sbjct: 68 RRLAKLAHAPFIKVEATKFTEVGYVGKEVETIIRDLADMAIKMVKESEMDRVKHLAEEAA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 355
E+R++D+L+P + D +TRQIFRK+LREG LD+KEIE++L +E
Sbjct: 128 EERILDVLLPPA-RDGFGNDEKSDDS--NTRQIFRKKLREGKLDDKEIELDLAAPQVGVE 184
Query: 356 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 415
IM+PPGME+MT+Q++ MF + + + RK+KI++A+K L +EEA K++N+D+I+QKAI+
Sbjct: 185 IMAPPGMEDMTSQLQNMFQNMSSEKTNKRKLKIKDALKALQEEEAAKIVNQDDIKQKAID 244
Query: 416 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 475
VEQNGI+F+DEIDKI R+ + D+SR GVQRDLLPLVEG+TV+TK+G+IKTDHILF
Sbjct: 245 AVEQNGIVFIDEIDKICKRADSSGGGDVSREGVQRDLLPLVEGSTVSTKHGMIKTDHILF 304
Query: 476 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 535
IASGAF + KPSDLIPELQGR PIRVEL +L+ DF RI+T LT+QY ALLATEG+
Sbjct: 305 IASGAFQMTKPSDLIPELQGRLPIRVELQALTADDFVRILTEPFASLTEQYIALLATEGV 364
Query: 536 KIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDADY 592
+ F DDGI+ +A+ A+ +NE TENIGARRL+T ME+L+E++SFN++ S + +D Y
Sbjct: 365 SVTFTDDGIKAIADSAWQVNETTENIGARRLHTMMERLVEDLSFNADQRSGETISIDQAY 424
Query: 593 VNSRLGDLSINEDLSRY 609
V L ++ +EDLSR+
Sbjct: 425 VTKILSEVVKDEDLSRF 441
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 236/386 (61%), Positives = 309/386 (80%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIV ELD +++GQ+ AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVHELDSHIVGQSDAKRAVAIALRNRWRRMQLDKDLRNEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL++APFIK+EATKFTEVGYVG++V+TIIRDL D++IK +E E+++V+ AE+AA
Sbjct: 68 RRLAKLAHAPFIKVEATKFTEVGYVGKEVETIIRDLADMAIKMVKESEMDRVKHLAEEAA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 953
E+R++D+L+P + D +TRQIFRK+LREG LD+KEIE++L +E
Sbjct: 128 EERILDVLLPPA-RDGFGNDEKSDDS--NTRQIFRKKLREGKLDDKEIELDLAAPQVGVE 184
Query: 954 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 1013
IM+PPGME+MT+Q++ MF + + + RK+KI++A+K L +EEA K++N+D+I+QKAI+
Sbjct: 185 IMAPPGMEDMTSQLQNMFQNMSSEKTNKRKLKIKDALKALQEEEAAKIVNQDDIKQKAID 244
Query: 1014 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 1073
VEQNGI+F+DEIDKI R+ + D+SR GVQRDLLPLVEG+TV+TK+G+IKTDHILF
Sbjct: 245 AVEQNGIVFIDEIDKICKRADSSGGGDVSREGVQRDLLPLVEGSTVSTKHGMIKTDHILF 304
Query: 1074 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 1133
IASGAF + KPSDLIPELQGR PIRVEL +L+ DF RI+T LT+QY ALLATEG+
Sbjct: 305 IASGAFQMTKPSDLIPELQGRLPIRVELQALTADDFVRILTEPFASLTEQYIALLATEGV 364
Query: 1134 KIEFVDDGIQRLAEIAYCINERTENI 1159
+ F DDGI+ +A+ A+ +NE TENI
Sbjct: 365 SVTFTDDGIKAIADSAWQVNETTENI 390
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 253/437 (57%), Positives = 348/437 (79%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSEL++++IGQ++AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEESLRVEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+ RAE+ A
Sbjct: 68 RRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVKFRAEELA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 355
E+RV+D L+P + + STRQ+FRK+LREG L++KEIEI + +E
Sbjct: 128 EERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVAVPQMGVE 185
Query: 356 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 415
IM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E++++AI
Sbjct: 186 IMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEELKEQAIY 245
Query: 416 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 475
NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G+++TDHILF
Sbjct: 246 NVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMVRTDHILF 304
Query: 476 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 535
IASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY AL+ TE +
Sbjct: 305 IASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQV 364
Query: 536 KIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDADY 592
++F +DGI+++A+ A+ +NE TENIGARRL+T +E+L++E+SF++ + ++DA Y
Sbjct: 365 DVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLERLMDEISFDATEKAGQAFVIDAAY 424
Query: 593 VNSRLGDLSINEDLSRY 609
V +RLG+L +EDLSR+
Sbjct: 425 VKARLGELVEDEDLSRF 441
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 229/386 (59%), Positives = 309/386 (80%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSEL++++IGQ++AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEESLRVEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+ RAE+ A
Sbjct: 68 RRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVKFRAEELA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 953
E+RV+D L+P + + STRQ+FRK+LREG L++KEIEI + +E
Sbjct: 128 EERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVAVPQMGVE 185
Query: 954 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 1013
IM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E++++AI
Sbjct: 186 IMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEELKEQAIY 245
Query: 1014 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 1073
NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G+++TDHILF
Sbjct: 246 NVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMVRTDHILF 304
Query: 1074 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 1133
IASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY AL+ TE +
Sbjct: 305 IASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQV 364
Query: 1134 KIEFVDDGIQRLAEIAYCINERTENI 1159
++F +DGI+++A+ A+ +NE TENI
Sbjct: 365 DVQFTEDGIKQIADAAWQVNETTENI 390
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 253/437 (57%), Positives = 348/437 (79%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSEL++++IGQ++AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEESLRVEVTPKNILMIGPTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+ RAE+ A
Sbjct: 68 RRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVKFRAEELA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 355
E+RV+D L+P + + STRQ+FRK+LREG L++KEIEI + +E
Sbjct: 128 EERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVAVPQMGVE 185
Query: 356 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 415
IM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E++++AI
Sbjct: 186 IMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEELKEQAIY 245
Query: 416 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 475
NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G+++TDHILF
Sbjct: 246 NVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMVRTDHILF 304
Query: 476 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 535
IASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY AL+ TE +
Sbjct: 305 IASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQV 364
Query: 536 KIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDADY 592
++F +DGI+++A+ A+ +NE TENIGARRL+T +E+L++E+SF++ + ++DA Y
Sbjct: 365 DVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLERLMDEISFDATEKAGQAFVIDAAY 424
Query: 593 VNSRLGDLSINEDLSRY 609
V +RLG+L +EDLSR+
Sbjct: 425 VKARLGELVEDEDLSRF 441
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 229/386 (59%), Positives = 309/386 (80%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSEL++++IGQ++AKRAVAIALRNRWRR Q+ L+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 8 EIVSELNRHIIGQDKAKRAVAIALRNRWRRMQLEESLRVEVTPKNILMIGPTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+ RAE+ A
Sbjct: 68 RRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVKFRAEELA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHME 953
E+RV+D L+P + + STRQ+FRK+LREG L++KEIEI + +E
Sbjct: 128 EERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVAVPQMGVE 185
Query: 954 IMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAIN 1013
IM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E++++AI
Sbjct: 186 IMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEELKEQAIY 245
Query: 1014 NVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILF 1073
NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G+++TDHILF
Sbjct: 246 NVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMVRTDHILF 304
Query: 1074 IASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGI 1133
IASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY AL+ TE +
Sbjct: 305 IASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQV 364
Query: 1134 KIEFVDDGIQRLAEIAYCINERTENI 1159
++F +DGI+++A+ A+ +NE TENI
Sbjct: 365 DVQFTEDGIKQIADAAWQVNETTENI 390
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 243/440 (55%), Positives = 314/440 (71%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSELD+++IGQ AKRAVA+ALRNRWRR+Q+ L+ E+ PKNILMIGPTGVGKTEI+
Sbjct: 8 EIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLADDLRDEVYPKNILMIGPTGVGKTEIS 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+ APFIK+EATKFTEVGYVGRDV+ IIRDL D +I QTR++ ++VR RA AA
Sbjct: 68 RRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLADAAIVQTRDYMRDEVRARAHKAA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG---P 352
EDRVI + + TR++FRK+L+ G LD+ IE+E+ D P
Sbjct: 128 EDRVITAIAGEDAREG-------------TREMFRKKLKSGELDDTVIELEVADGANPMP 174
Query: 353 HMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQK 412
EI PG + +F R +K+++ ++ ++LI EEA+KLL+++ + +
Sbjct: 175 MFEIPGQPGGNMGMMNLGDLFGKAFAGRTTRKKLRVADSYEILIGEEADKLLDDELVNKT 234
Query: 413 AINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDH 472
A+ VEQNGI+FLDEIDK+ RS D+SR GVQRDLLPL+EGTTV+TKYG IKTDH
Sbjct: 235 ALEAVEQNGIVFLDEIDKVCARSDARG-ADVSREGVQRDLLPLIEGTTVSTKYGPIKTDH 293
Query: 473 ILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLAT 532
ILFIASGAFH+AKPSDL+PELQGR PIRVEL +L+ DF RI+T T+ LT QY AL+ T
Sbjct: 294 ILFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGT 353
Query: 533 EGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVD 589
E + + F DGI LA IA +N+ ENIGARRLYT ME++ EE+SF + + S + VD
Sbjct: 354 ENVAVTFTPDGIAALAHIAAEVNQSVENIGARRLYTVMERVFEELSFTAPDRSGEAVTVD 413
Query: 590 ADYVNSRLGDLSINEDLSRY 609
A +V++ LG+L+ + DLSRY
Sbjct: 414 AGFVDTNLGELTRSTDLSRY 433
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 217/389 (55%), Positives = 276/389 (70%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSELD+++IGQ AKRAVA+ALRNRWRR+Q+ L+ E+ PKNILMIGPTGVGKTEI+
Sbjct: 8 EIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLADDLRDEVYPKNILMIGPTGVGKTEIS 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+ APFIK+EATKFTEVGYVGRDV+ IIRDL D +I QTR++ ++VR RA AA
Sbjct: 68 RRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLADAAIVQTRDYMRDEVRARAHKAA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG---P 950
EDRVI + + TR++FRK+L+ G LD+ IE+E+ D P
Sbjct: 128 EDRVITAIAGEDAREG-------------TREMFRKKLKSGELDDTVIELEVADGANPMP 174
Query: 951 HMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQK 1010
EI PG + +F R +K+++ ++ ++LI EEA+KLL+++ + +
Sbjct: 175 MFEIPGQPGGNMGMMNLGDLFGKAFAGRTTRKKLRVADSYEILIGEEADKLLDDELVNKT 234
Query: 1011 AINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDH 1070
A+ VEQNGI+FLDEIDK+ RS D+SR GVQRDLLPL+EGTTV+TKYG IKTDH
Sbjct: 235 ALEAVEQNGIVFLDEIDKVCARSDARG-ADVSREGVQRDLLPLIEGTTVSTKYGPIKTDH 293
Query: 1071 ILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLAT 1130
ILFIASGAFH+AKPSDL+PELQGR PIRVEL +L+ DF RI+T T+ LT QY AL+ T
Sbjct: 294 ILFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGT 353
Query: 1131 EGIKIEFVDDGIQRLAEIAYCINERTENI 1159
E + + F DGI LA IA +N+ ENI
Sbjct: 354 ENVAVTFTPDGIAALAHIAAEVNQSVENI 382
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 227/459 (49%), Positives = 328/459 (71%)
Query: 170 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGV 229
++L +IV LDKY+IGQ AK+AVA+ALRNR+RR+ + L+ EI PKNILMIGPTGV
Sbjct: 2 ENLTPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRRKLLPPHLKDEIIPKNILMIGPTGV 61
Query: 230 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRT 289
GKTEIARRLAKL APF+K+EATKFTEVGYVGRDV+ +IRDL++ S++ RE +I V
Sbjct: 62 GKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDLVETSLRMVREEKIKMVED 121
Query: 290 RAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXIST---------------RQIFRKRLR 334
+A + A +R+ +I++P+ +K N+ F I R+ + +++
Sbjct: 122 KAYNLAVERLSEIMIPNPKKENIKNPFEMFFGGIREDAAKTDPAYDELNYRRRELQDKIK 181
Query: 335 EGALDNKEIEIELNDTG-PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIK 393
+G LDN+ +EIE+ + P +E+ G+EEM + + + R+K R++ ++EA+K
Sbjct: 182 KGFLDNEMVEIEVEEQKTPMVEVFGVGGIEEMGLNFQDILGGLIPPRRKKRRVTVKEALK 241
Query: 394 LLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLL 453
+L +EA KL++ DE+Q++AI E++GI+FLDEIDKI + + + D+SR GVQRD+L
Sbjct: 242 ILTQQEAQKLIDMDEVQREAIKRAEEDGIVFLDEIDKIAS-TGNTHGPDVSRGGVQRDIL 300
Query: 454 PLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTR 513
P+VEG+TV TKYG +KTDHILFIA+GAFH++KPSDLIPELQGRFPIRVEL SL++ DF +
Sbjct: 301 PIVEGSTVLTKYGPVKTDHILFIAAGAFHMSKPSDLIPELQGRFPIRVELKSLTVEDFKK 360
Query: 514 IMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKL 573
I+T LTKQY LLATEG+ ++F +D ++ +A++AY +NER ENIGARRL T +EK+
Sbjct: 361 ILTVPENALTKQYVELLATEGVNLKFTEDSLEEIAKMAYTVNERNENIGARRLITILEKV 420
Query: 574 LEEVSFNSNNI---SLLVDADYVNSRLGDLSINEDLSRY 609
LE++SFN+ + ++++D +V +L ++ + DLSRY
Sbjct: 421 LEDLSFNAPEMWGQTVVIDRKFVQDKLSEIVHDSDLSRY 459
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 206/408 (50%), Positives = 292/408 (71%)
Query: 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGV 827
++L +IV LDKY+IGQ AK+AVA+ALRNR+RR+ + L+ EI PKNILMIGPTGV
Sbjct: 2 ENLTPRQIVEYLDKYIIGQEAAKKAVAVALRNRYRRKLLPPHLKDEIIPKNILMIGPTGV 61
Query: 828 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRT 887
GKTEIARRLAKL APF+K+EATKFTEVGYVGRDV+ +IRDL++ S++ RE +I V
Sbjct: 62 GKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDLVETSLRMVREEKIKMVED 121
Query: 888 RAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXIST---------------RQIFRKRLR 932
+A + A +R+ +I++P+ +K N+ F I R+ + +++
Sbjct: 122 KAYNLAVERLSEIMIPNPKKENIKNPFEMFFGGIREDAAKTDPAYDELNYRRRELQDKIK 181
Query: 933 EGALDNKEIEIELNDTG-PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIK 991
+G LDN+ +EIE+ + P +E+ G+EEM + + + R+K R++ ++EA+K
Sbjct: 182 KGFLDNEMVEIEVEEQKTPMVEVFGVGGIEEMGLNFQDILGGLIPPRRKKRRVTVKEALK 241
Query: 992 LLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLL 1051
+L +EA KL++ DE+Q++AI E++GI+FLDEIDKI + + + D+SR GVQRD+L
Sbjct: 242 ILTQQEAQKLIDMDEVQREAIKRAEEDGIVFLDEIDKIAS-TGNTHGPDVSRGGVQRDIL 300
Query: 1052 PLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTR 1111
P+VEG+TV TKYG +KTDHILFIA+GAFH++KPSDLIPELQGRFPIRVEL SL++ DF +
Sbjct: 301 PIVEGSTVLTKYGPVKTDHILFIAAGAFHMSKPSDLIPELQGRFPIRVELKSLTVEDFKK 360
Query: 1112 IMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
I+T LTKQY LLATEG+ ++F +D ++ +A++AY +NER ENI
Sbjct: 361 ILTVPENALTKQYVELLATEGVNLKFTEDSLEEIAKMAYTVNERNENI 408
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 227/443 (51%), Positives = 306/443 (69%)
Query: 177 IVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIAR 236
+VS LD++V+GQ AK+ +AIA+RNRWRR I PL EI PKNILMIGPTGVGKTEIAR
Sbjct: 32 LVSYLDRFVVGQKLAKKKIAIAIRNRWRRNNIPKPLHDEIIPKNILMIGPTGVGKTEIAR 91
Query: 237 RLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 296
R+AKLS APFIK+EATKFTEVGYVGRDV++IIRDL+D ++ Q ++ + + AE++A+
Sbjct: 92 RVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLVDSAVAQVKDQKRKQFSKEAEESAK 151
Query: 297 DRVIDILVPSKEKSNLDTDFXXXXXXI-STRQIFRKRLREGALDNKEIEIELNDTG---- 351
++++D LV K D D R +F K+L EG LD+ EIEI + +
Sbjct: 152 EKILDALVGKKNTE--DDDLADGEDEKHDARAVFEKKLDEGKLDDAEIEINVRELPQNVF 209
Query: 352 PHMEIMSPPGMEEMTAQIKTMFS-VIGNHRK-KTRKIKIREAIKLLIDEEANKLLNEDEI 409
P M++ PG + I M S V G ++K K +++K+++A K+L D E L +ED I
Sbjct: 210 PTMDVPGMPGTQIGMMNIGDMMSKVFGANKKFKRKRVKVKDARKILADAEVEDLFDEDAI 269
Query: 410 QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIK 469
++A++ V G++F+DEIDKI R+ +++R GVQRDLLPL+EGTTV TKYG++K
Sbjct: 270 IKEALDLVTNRGMVFIDEIDKICARTEVRG--EVNREGVQRDLLPLLEGTTVVTKYGVVK 327
Query: 470 TDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEAL 529
TDHILF+ SGAFH AKPSDL+PELQGR PIRVELDSL + D RI+T T L KQY AL
Sbjct: 328 TDHILFVGSGAFHFAKPSDLLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCAL 387
Query: 530 LATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSN-NI--SL 586
L TEG+ +EF DG++ +AE A +N ENIGARRL+T ME LLEE++F +N N+ +
Sbjct: 388 LETEGVSLEFTKDGVRAIAEAAITVNNEVENIGARRLHTIMETLLEEINFEANDNVGKTF 447
Query: 587 LVDADYVNSRLGDLSINEDLSRY 609
+D +YV+ L + DLS++
Sbjct: 448 SIDREYVDKHLQTIIKKLDLSKF 470
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 205/392 (52%), Positives = 272/392 (69%)
Query: 775 IVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIAR 834
+VS LD++V+GQ AK+ +AIA+RNRWRR I PL EI PKNILMIGPTGVGKTEIAR
Sbjct: 32 LVSYLDRFVVGQKLAKKKIAIAIRNRWRRNNIPKPLHDEIIPKNILMIGPTGVGKTEIAR 91
Query: 835 RLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 894
R+AKLS APFIK+EATKFTEVGYVGRDV++IIRDL+D ++ Q ++ + + AE++A+
Sbjct: 92 RVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLVDSAVAQVKDQKRKQFSKEAEESAK 151
Query: 895 DRVIDILVPSKEKSNLDTDFXXXXXXI-STRQIFRKRLREGALDNKEIEIELNDTG---- 949
++++D LV K D D R +F K+L EG LD+ EIEI + +
Sbjct: 152 EKILDALVGKKNTE--DDDLADGEDEKHDARAVFEKKLDEGKLDDAEIEINVRELPQNVF 209
Query: 950 PHMEIMSPPGMEEMTAQIKTMFS-VIGNHRK-KTRKIKIREAIKLLIDEEANKLLNEDEI 1007
P M++ PG + I M S V G ++K K +++K+++A K+L D E L +ED I
Sbjct: 210 PTMDVPGMPGTQIGMMNIGDMMSKVFGANKKFKRKRVKVKDARKILADAEVEDLFDEDAI 269
Query: 1008 QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIK 1067
++A++ V G++F+DEIDKI R+ +++R GVQRDLLPL+EGTTV TKYG++K
Sbjct: 270 IKEALDLVTNRGMVFIDEIDKICARTEVRG--EVNREGVQRDLLPLLEGTTVVTKYGVVK 327
Query: 1068 TDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEAL 1127
TDHILF+ SGAFH AKPSDL+PELQGR PIRVELDSL + D RI+T T L KQY AL
Sbjct: 328 TDHILFVGSGAFHFAKPSDLLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCAL 387
Query: 1128 LATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
L TEG+ +EF DG++ +AE A +N ENI
Sbjct: 388 LETEGVSLEFTKDGVRAIAEAAITVNNEVENI 419
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 226/448 (50%), Positives = 313/448 (69%)
Query: 170 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGV 229
+ L +I ELD+++IGQ AKRAVAIALRNRWRR ++ PL++EI PKNILMIG TG+
Sbjct: 53 QELTPQQITQELDRFIIGQADAKRAVAIALRNRWRRNRVPEPLREEIIPKNILMIGHTGI 112
Query: 230 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRT 289
GKTEIARRLAKL+ APFIK+EATKFTE+GYVGRDVD+IIRDL+D++I +E V T
Sbjct: 113 GKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDVAINLEKEKSRKFVET 172
Query: 290 RAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELND 349
+A+ AE+ +++ LV + T+ IF+++LR G +N EI I + +
Sbjct: 173 KAKSLAENIILEALVGADASQE-------------TKTIFQEKLRNGEFENFEISISIKE 219
Query: 350 TG---PHMEIMSPPGMEEMTAQI-KTMFSVIGNHRK-KTRKIKIREAIKLLIDEEANKLL 404
+ P ++I + PG + I + + ++GN+++ KT K+ ++EA +LLI+EE+ KL+
Sbjct: 220 SKNAIPSIDIPNIPGNQVGIMNINEIVHKMLGNNKQLKTIKVTVKEARELLINEESEKLM 279
Query: 405 NEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 464
+ED+I + A+ +GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V TK
Sbjct: 280 DEDKIIKDALLLASNDGIVFLDEIDKIAARTEIRG--EVNREGVQRDLLPLLEGTSVTTK 337
Query: 465 YGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTK 524
YG I TDHILFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L K
Sbjct: 338 YGTITTDHILFIASGAFHLAKPSDLLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLK 397
Query: 525 QYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNI 584
QY AL+ TE I I+F D+G+ +AEIA +N ENIGARRL+T +EKL+E++S+ +
Sbjct: 398 QYCALMKTENITIDFTDEGVSTIAEIASTVNREVENIGARRLHTILEKLMEDISYTATEN 457
Query: 585 S---LLVDADYVNSRLGDLSINEDLSRY 609
S ++D++YV +L D++ DLS++
Sbjct: 458 SGRTYVIDSEYVKKKLEDIAKQLDLSKF 485
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 206/397 (51%), Positives = 277/397 (69%)
Query: 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGV 827
+ L +I ELD+++IGQ AKRAVAIALRNRWRR ++ PL++EI PKNILMIG TG+
Sbjct: 53 QELTPQQITQELDRFIIGQADAKRAVAIALRNRWRRNRVPEPLREEIIPKNILMIGHTGI 112
Query: 828 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRT 887
GKTEIARRLAKL+ APFIK+EATKFTE+GYVGRDVD+IIRDL+D++I +E V T
Sbjct: 113 GKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDVAINLEKEKSRKFVET 172
Query: 888 RAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELND 947
+A+ AE+ +++ LV + T+ IF+++LR G +N EI I + +
Sbjct: 173 KAKSLAENIILEALVGADASQE-------------TKTIFQEKLRNGEFENFEISISIKE 219
Query: 948 TG---PHMEIMSPPGMEEMTAQI-KTMFSVIGNHRK-KTRKIKIREAIKLLIDEEANKLL 1002
+ P ++I + PG + I + + ++GN+++ KT K+ ++EA +LLI+EE+ KL+
Sbjct: 220 SKNAIPSIDIPNIPGNQVGIMNINEIVHKMLGNNKQLKTIKVTVKEARELLINEESEKLM 279
Query: 1003 NEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 1062
+ED+I + A+ +GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V TK
Sbjct: 280 DEDKIIKDALLLASNDGIVFLDEIDKIAARTEIRG--EVNREGVQRDLLPLLEGTSVTTK 337
Query: 1063 YGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTK 1122
YG I TDHILFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L K
Sbjct: 338 YGTITTDHILFIASGAFHLAKPSDLLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLK 397
Query: 1123 QYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
QY AL+ TE I I+F D+G+ +AEIA +N ENI
Sbjct: 398 QYCALMKTENITIDFTDEGVSTIAEIASTVNREVENI 434
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 222/443 (50%), Positives = 298/443 (67%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
+I ELD++++GQ AKRAVA ALR+RWRR ++ PL+ EI PKNILMIG TGVGKTEIA
Sbjct: 8 QITKELDRFIVGQTEAKRAVANALRSRWRRNRVPQPLRDEIIPKNILMIGHTGVGKTEIA 67
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+ APFIK+EATKFTE+GYVGRDVD+I+RDL+D ++ +E VR +A +A
Sbjct: 68 RRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLVDRAVLLVKEKYRKVVRKQARKSA 127
Query: 296 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG---- 351
ED +++ LV + T+ FR +LR G +N EI I + D
Sbjct: 128 EDIILNCLVGADASEE-------------TKNAFRHKLRAGEYENSEISINVKDNRKSMP 174
Query: 352 PHMEIMSPPGMEEMTAQIKTMFSVI--GNHRKKTRKIKIREAIKLLIDEEANKLLNEDEI 409
P ++ PG + I + + GN +T ++EA ++L+DEE KL++ED+I
Sbjct: 175 PSFDVPGMPGGQVGIMNINEIVQKVLGGNKLSRTISTTVKEAREILLDEETEKLIDEDKI 234
Query: 410 QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIK 469
++A++ GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V+TKYG +
Sbjct: 235 VREALHIASNEGIVFLDEIDKIAARTEVRG--EVNREGVQRDLLPLLEGTSVSTKYGTVT 292
Query: 470 TDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEAL 529
TDH+LFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L KQY AL
Sbjct: 293 TDHVLFIASGAFHLAKPSDLLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRAL 352
Query: 530 LATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---L 586
L TEG+ +EF +DGI +AEIA +N ENIGARRL+T MEKL+E++S+N++ S
Sbjct: 353 LETEGVTVEFTEDGIFAIAEIASTVNREVENIGARRLHTIMEKLMEDISYNASENSGQTF 412
Query: 587 LVDADYVNSRLGDLSINEDLSRY 609
++D +V RL D+S DLS++
Sbjct: 413 VIDEKHVRERLEDISKQLDLSKF 435
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 199/392 (50%), Positives = 262/392 (66%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
+I ELD++++GQ AKRAVA ALR+RWRR ++ PL+ EI PKNILMIG TGVGKTEIA
Sbjct: 8 QITKELDRFIVGQTEAKRAVANALRSRWRRNRVPQPLRDEIIPKNILMIGHTGVGKTEIA 67
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+ APFIK+EATKFTE+GYVGRDVD+I+RDL+D ++ +E VR +A +A
Sbjct: 68 RRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLVDRAVLLVKEKYRKVVRKQARKSA 127
Query: 894 EDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG---- 949
ED +++ LV + T+ FR +LR G +N EI I + D
Sbjct: 128 EDIILNCLVGADASEE-------------TKNAFRHKLRAGEYENSEISINVKDNRKSMP 174
Query: 950 PHMEIMSPPGMEEMTAQIKTMFSVI--GNHRKKTRKIKIREAIKLLIDEEANKLLNEDEI 1007
P ++ PG + I + + GN +T ++EA ++L+DEE KL++ED+I
Sbjct: 175 PSFDVPGMPGGQVGIMNINEIVQKVLGGNKLSRTISTTVKEAREILLDEETEKLIDEDKI 234
Query: 1008 QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIK 1067
++A++ GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V+TKYG +
Sbjct: 235 VREALHIASNEGIVFLDEIDKIAARTEVRG--EVNREGVQRDLLPLLEGTSVSTKYGTVT 292
Query: 1068 TDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEAL 1127
TDH+LFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L KQY AL
Sbjct: 293 TDHVLFIASGAFHLAKPSDLLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRAL 352
Query: 1128 LATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
L TEG+ +EF +DGI +AEIA +N ENI
Sbjct: 353 LETEGVTVEFTEDGIFAIAEIASTVNREVENI 384
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 216/447 (48%), Positives = 297/447 (66%)
Query: 171 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVG 230
+L EIV LD YVIGQ +AK+ +AIALRNR+RR Q++ LQ +I PKNILMIG TGVG
Sbjct: 2 NLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQDDIVPKNILMIGSTGVG 61
Query: 231 KTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTR 290
KTEIARRLAK+ PFIKIEA+K+TEVG+VGRDV++++RDL + ++ + + K + +
Sbjct: 62 KTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDLANAALNLVKNEQREKNKDK 121
Query: 291 AEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN-- 348
++ E+++++ L+P K D + R +LR G LD IEIE++
Sbjct: 122 IDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEK---MRTKLRNGNLDESTIEIEISQN 178
Query: 349 --DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRK-IKIREAIKLLIDEEANKLLN 405
DT P++ PP M M +K VIG KK +K +KI++A L +E K+L+
Sbjct: 179 MFDTNPNL----PPEMGAMQDIVK----VIGVGSKKVKKEMKIKDAKNALKNEAGEKILD 230
Query: 406 EDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ I+ +A+ E GIIF+DEIDKI S +N D S+ GVQRDLLP+VEG+ V TK
Sbjct: 231 QESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRDLLPIVEGSNVQTKI 290
Query: 466 GIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQ 525
G +KTDHILFIA+GAFHL+KPSDLIPELQGRFP+RVELDSL I+T L KQ
Sbjct: 291 GTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQ 350
Query: 526 YEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS 585
Y LL TE +++EF D+ I+ +A+IA NE ++IGARRL+T +EKLLE++SF ++ +
Sbjct: 351 YSQLLKTENLELEFNDEAIKEIAKIASRANEEMQDIGARRLHTVIEKLLEDLSFEADEYA 410
Query: 586 ---LLVDADYVNSRLGDLSINEDLSRY 609
+VD V +LGD+ N+DL+RY
Sbjct: 411 GKKFVVDKKMVEEKLGDIIENKDLARY 437
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 192/396 (48%), Positives = 261/396 (65%)
Query: 769 SLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVG 828
+L EIV LD YVIGQ +AK+ +AIALRNR+RR Q++ LQ +I PKNILMIG TGVG
Sbjct: 2 NLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQDDIVPKNILMIGSTGVG 61
Query: 829 KTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTR 888
KTEIARRLAK+ PFIKIEA+K+TEVG+VGRDV++++RDL + ++ + + K + +
Sbjct: 62 KTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDLANAALNLVKNEQREKNKDK 121
Query: 889 AEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN-- 946
++ E+++++ L+P K D + R +LR G LD IEIE++
Sbjct: 122 IDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEK---MRTKLRNGNLDESTIEIEISQN 178
Query: 947 --DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRK-IKIREAIKLLIDEEANKLLN 1003
DT P++ PP M M +K VIG KK +K +KI++A L +E K+L+
Sbjct: 179 MFDTNPNL----PPEMGAMQDIVK----VIGVGSKKVKKEMKIKDAKNALKNEAGEKILD 230
Query: 1004 EDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ I+ +A+ E GIIF+DEIDKI S +N D S+ GVQRDLLP+VEG+ V TK
Sbjct: 231 QESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRDLLPIVEGSNVQTKI 290
Query: 1064 GIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQ 1123
G +KTDHILFIA+GAFHL+KPSDLIPELQGRFP+RVELDSL I+T L KQ
Sbjct: 291 GTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQ 350
Query: 1124 YEALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
Y LL TE +++EF D+ I+ +A+IA NE ++I
Sbjct: 351 YSQLLKTENLELEFNDEAIKEIAKIASRANEEMQDI 386
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 209/450 (46%), Positives = 286/450 (63%)
Query: 165 DEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMI 224
D I + +L+ +IVS LD+YVIGQ+ AKRA++IALRNRWRR+++ ++ ++ PKNILMI
Sbjct: 261 DMIGEDNLLPRDIVSGLDEYVIGQSDAKRAISIALRNRWRRKRLDASMKPDVYPKNILMI 320
Query: 225 GPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEI 284
GPTGVGKTE+ARRLAK+ NAPF+K+EATK+TEVG+ G DVDTIIRDLI+ SI +
Sbjct: 321 GPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNIKTKIA 380
Query: 285 NKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIE 344
N + E E VI L+ L D I+ ++ +K REG LD+ EIE
Sbjct: 381 NSHKASIEADVEKNVISSLI------GLQNDLSA----ITIEELLKK-YREGQLDSVEIE 429
Query: 345 IELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLL 404
IE++ + G + I + S I K +K+ I EA K + +++ L
Sbjct: 430 IEVSS-----DSKGSLG-QAYDENIAKLLSAIDKQPSKIKKVTIAEA-KEIFEKQYRDLY 482
Query: 405 N-EDEIQQKAINNVEQNGIIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVN 462
++ + AI + EQNGI+FLDEIDKI T+R S N D S GVQRDLLP+VEG V+
Sbjct: 483 TVSQDVTKLAIQSAEQNGIVFLDEIDKICTSRESIKNGGDASTDGVQRDLLPIVEGCMVS 542
Query: 463 TKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCL 522
TKYG I T ILFIASGAFH KPSDLI ELQGR PIRVEL L DF +I+T
Sbjct: 543 TKYGQIDTSRILFIASGAFHNTKPSDLISELQGRLPIRVELKPLEQKDFYKILTEPKNNQ 602
Query: 523 TKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSN 582
+Q +ALL TE I++EF DD + +A+IA+ N + +N+GARRL+ +E+++E++SFN +
Sbjct: 603 IQQQKALLKTEDIQLEFTDDALLEVAKIAFEANAQVQNLGARRLHGIIERIVEDISFNCD 662
Query: 583 ---NISLLVDADYVNSRLGDLSINEDLSRY 609
++++D + L +L DLS+Y
Sbjct: 663 IHKGKTVVLDTPDIRKHLSELLFKTDLSKY 692
Score = 730 (262.0 bits), Expect = 1.3e-71, P = 1.3e-71
Identities = 178/400 (44%), Positives = 247/400 (61%)
Query: 763 DEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMI 822
D I + +L+ +IVS LD+YVIGQ+ AKRA++IALRNRWRR+++ ++ ++ PKNILMI
Sbjct: 261 DMIGEDNLLPRDIVSGLDEYVIGQSDAKRAISIALRNRWRRKRLDASMKPDVYPKNILMI 320
Query: 823 GPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEI 882
GPTGVGKTE+ARRLAK+ NAPF+K+EATK+TEVG+ G DVDTIIRDLI+ SI +
Sbjct: 321 GPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNIKTKIA 380
Query: 883 NKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIE 942
N + E E VI L+ L D I+ ++ +K REG LD+ EIE
Sbjct: 381 NSHKASIEADVEKNVISSLI------GLQNDLSA----ITIEELLKK-YREGQLDSVEIE 429
Query: 943 IELN-DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHR-KKTRKIKIREAIKLL-IDEEAN 999
IE++ D+ + + ++ + I S I + ++I ++ L + ++
Sbjct: 430 IEVSSDSKGSLGQAYDENIAKLLSAIDKQPSKIKKVTIAEAKEIFEKQYRDLYTVSQDVT 489
Query: 1000 KLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTV 1059
KL + +Q I +++ +D+I T+R S N D S GVQRDLLP+VEG V
Sbjct: 490 KLAIQSA-EQNGIVFLDE-----IDKI--CTSRESIKNGGDASTDGVQRDLLPIVEGCMV 541
Query: 1060 NTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVC 1119
+TKYG I T ILFIASGAFH KPSDLI ELQGR PIRVEL L DF +I+T
Sbjct: 542 STKYGQIDTSRILFIASGAFHNTKPSDLISELQGRLPIRVELKPLEQKDFYKILTEPKNN 601
Query: 1120 LTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
+Q +ALL TE I++EF DD + +A+IA+ N + +N+
Sbjct: 602 QIQQQKALLKTEDIQLEFTDDALLEVAKIAFEANAQVQNL 641
>TIGR_CMR|CBU_2011 [details] [associations]
symbol:CBU_2011 "protease HslVU, subunit HslV"
species:227377 "Coxiella burnetii RSA 493" [GO:0006508
"proteolysis" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 GO:GO:0046872 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0051603 GO:GO:0009376 eggNOG:COG5405 HOGENOM:HOG000064533
KO:K01419 OMA:KDWRTDK ProtClustDB:PRK05456 GO:GO:0005839
GO:GO:0004298 TIGRFAMs:TIGR03692 RefSeq:NP_820986.2
ProteinModelPortal:Q83A95 SMR:Q83A95 MEROPS:T01.006 PRIDE:Q83A95
GeneID:1209924 KEGG:cbu:CBU_2011 PATRIC:17932767
BioCyc:CBUR227377:GJ7S-1985-MONOMER Uniprot:Q83A95
Length = 181
Score = 465 (168.7 bits), Expect = 5.8e-43, P = 5.8e-43
Identities = 93/161 (57%), Positives = 117/161 (72%)
Query: 15 MEKFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAF 74
ME+F+GTTILSVRR KV +GGDGQV+ G+ IMK +A+KVR+LY +V+AG AG TADAF
Sbjct: 1 MEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAF 60
Query: 75 TLLDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLE 134
TL + FE+ LEKH GNL RA+VELAK+WR DR LRRLEA+L A+ + +LIITG GDV+E
Sbjct: 61 TLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIE 120
Query: 135 PENXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
PE KAL ENT+L +I++K+L IA
Sbjct: 121 PEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIA 161
Score = 465 (168.7 bits), Expect = 5.8e-43, P = 5.8e-43
Identities = 93/161 (57%), Positives = 117/161 (72%)
Query: 613 MEKFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAF 672
ME+F+GTTILSVRR KV +GGDGQV+ G+ IMK +A+KVR+LY +V+AG AG TADAF
Sbjct: 1 MEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAF 60
Query: 673 TLLDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLE 732
TL + FE+ LEKH GNL RA+VELAK+WR DR LRRLEA+L A+ + +LIITG GDV+E
Sbjct: 61 TLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIE 120
Query: 733 PENXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
PE KAL ENT+L +I++K+L IA
Sbjct: 121 PEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIA 161
>TIGR_CMR|SO_4162 [details] [associations]
symbol:SO_4162 "ATP-dependent protease HslV" species:211586
"Shewanella oneidensis MR-1" [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0051603 GO:GO:0009376 eggNOG:COG5405 HOGENOM:HOG000064533
KO:K01419 OMA:KDWRTDK ProtClustDB:PRK05456 GO:GO:0005839
GO:GO:0004298 TIGRFAMs:TIGR03692 MEROPS:T01.006 RefSeq:NP_719691.1
ProteinModelPortal:Q8E9V0 SMR:Q8E9V0 GeneID:1171769
KEGG:son:SO_4162 PATRIC:23527954 Uniprot:Q8E9V0
Length = 174
Score = 450 (163.5 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 90/155 (58%), Positives = 114/155 (73%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR N+V + GDGQV+ GN +MK +AKKVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 140
E+ LE HQG+L+R++VELAK+WR DR LR+LEAML+ A+ E +LIITGNGDV++PE+
Sbjct: 62 ESKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEHDLV 121
Query: 141 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
AL +NTEL EI +KSL IA
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIA 156
Score = 450 (163.5 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 90/155 (58%), Positives = 114/155 (73%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR N+V + GDGQV+ GN +MK +AKKVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 738
E+ LE HQG+L+R++VELAK+WR DR LR+LEAML+ A+ E +LIITGNGDV++PE+
Sbjct: 62 ESKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEHDLV 121
Query: 739 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
AL +NTEL EI +KSL IA
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIA 156
>TIGR_CMR|CPS_4369 [details] [associations]
symbol:CPS_4369 "ATP-dependent protease HslVU, HslV
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0051603 GO:GO:0009376 eggNOG:COG5405 HOGENOM:HOG000064533
KO:K01419 OMA:KDWRTDK ProtClustDB:PRK05456 GO:GO:0005839
GO:GO:0004298 TIGRFAMs:TIGR03692 MEROPS:T01.006 RefSeq:YP_271018.1
ProteinModelPortal:Q47W04 SMR:Q47W04 STRING:Q47W04 GeneID:3520045
KEGG:cps:CPS_4369 PATRIC:21471583
BioCyc:CPSY167879:GI48-4378-MONOMER Uniprot:Q47W04
Length = 172
Score = 448 (162.8 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 87/155 (56%), Positives = 114/155 (73%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR KV++GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGKVAIGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 140
E+ LE+HQG+L +A+VELAK+WR+DR LR+LEA+L A+ +LIITGNGDV++PE+
Sbjct: 62 ESKLEQHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVIQPEHDLI 121
Query: 141 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
AL ENT+L EI++KSL IA
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAKEIVEKSLTIA 156
Score = 448 (162.8 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 87/155 (56%), Positives = 114/155 (73%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR KV++GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGKVAIGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 738
E+ LE+HQG+L +A+VELAK+WR+DR LR+LEA+L A+ +LIITGNGDV++PE+
Sbjct: 62 ESKLEQHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVIQPEHDLI 121
Query: 739 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
AL ENT+L EI++KSL IA
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAKEIVEKSLTIA 156
>UNIPROTKB|Q9KNQ6 [details] [associations]
symbol:hslV "ATP-dependent protease subunit HslV"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353
InterPro:IPR022281 Pfam:PF00227 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0008233 GO:GO:0051603
GO:GO:0009376 eggNOG:COG5405 KO:K01419 OMA:KDWRTDK
ProtClustDB:PRK05456 GO:GO:0005839 GO:GO:0004298 TIGRFAMs:TIGR03692
MEROPS:T01.006 PIR:F82046 RefSeq:NP_232303.1
ProteinModelPortal:Q9KNQ6 SMR:Q9KNQ6 DNASU:2615503 GeneID:2615503
KEGG:vch:VC2675 PATRIC:20084368 Uniprot:Q9KNQ6
Length = 185
Score = 432 (157.1 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 88/155 (56%), Positives = 111/155 (71%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR NKV + GDGQV+ GN +MK +A+KVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 140
E+ L+ HQG+L +A+VELAK+WR+DR LRRLEA+L A+ +LIITGNGDVL+PE+
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 141 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
AL ENTEL I +K+L IA
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIA 156
Score = 432 (157.1 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 88/155 (56%), Positives = 111/155 (71%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR NKV + GDGQV+ GN +MK +A+KVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 738
E+ L+ HQG+L +A+VELAK+WR+DR LRRLEA+L A+ +LIITGNGDVL+PE+
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 739 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
AL ENTEL I +K+L IA
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIA 156
>TIGR_CMR|VC_2675 [details] [associations]
symbol:VC_2675 "protease HslVU, subunit HslV" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281 Pfam:PF00227
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0008233 GO:GO:0051603 GO:GO:0009376 eggNOG:COG5405 KO:K01419
OMA:KDWRTDK ProtClustDB:PRK05456 GO:GO:0005839 GO:GO:0004298
TIGRFAMs:TIGR03692 MEROPS:T01.006 PIR:F82046 RefSeq:NP_232303.1
ProteinModelPortal:Q9KNQ6 SMR:Q9KNQ6 DNASU:2615503 GeneID:2615503
KEGG:vch:VC2675 PATRIC:20084368 Uniprot:Q9KNQ6
Length = 185
Score = 432 (157.1 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 88/155 (56%), Positives = 111/155 (71%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR NKV + GDGQV+ GN +MK +A+KVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 140
E+ L+ HQG+L +A+VELAK+WR+DR LRRLEA+L A+ +LIITGNGDVL+PE+
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 141 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
AL ENTEL I +K+L IA
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIA 156
Score = 432 (157.1 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 88/155 (56%), Positives = 111/155 (71%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR NKV + GDGQV+ GN +MK +A+KVR+LY N+VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 738
E+ L+ HQG+L +A+VELAK+WR+DR LRRLEA+L A+ +LIITGNGDVL+PE+
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 739 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
AL ENTEL I +K+L IA
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIA 156
>UNIPROTKB|P43772 [details] [associations]
symbol:hslV "ATP-dependent protease subunit HslV"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00248 InterPro:IPR001353
InterPro:IPR022281 Pfam:PF00227 GO:GO:0046872 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0051603 GO:GO:0009376 PDB:1G3I
PDB:1KYI PDB:1OFH PDB:1OFI PDBsum:1G3I PDBsum:1KYI PDBsum:1OFH
PDBsum:1OFI eggNOG:COG5405 KO:K01419 OMA:KDWRTDK
ProtClustDB:PRK05456 GO:GO:0005839 GO:GO:0004298 TIGRFAMs:TIGR03692
MEROPS:T01.006 PIR:C64072 RefSeq:NP_438654.1 PDB:1G3K PDB:1JJW
PDBsum:1G3K PDBsum:1JJW ProteinModelPortal:P43772 SMR:P43772
DIP:DIP-6176N IntAct:P43772 GeneID:949571 KEGG:hin:HI0496
PATRIC:20189543 EvolutionaryTrace:P43772 Uniprot:P43772
Length = 175
Score = 429 (156.1 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 86/156 (55%), Positives = 113/156 (72%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR +V +GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE-NXX 139
E LE HQG+L++++VELAK+WR DR LR+LEAML+ A+ + +LIITG GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 140 XXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
+AL ENTEL EI++KSL IA
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIA 157
Score = 429 (156.1 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 86/156 (55%), Positives = 113/156 (72%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR +V +GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE-NXX 737
E LE HQG+L++++VELAK+WR DR LR+LEAML+ A+ + +LIITG GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 738 XXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
+AL ENTEL EI++KSL IA
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIA 157
>UNIPROTKB|P0A7B8 [details] [associations]
symbol:hslV species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0009376 "HslUV protease complex" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 GO:GO:0005829 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0009408 EMBL:L19201 GO:GO:0051603 EMBL:L14281 GO:GO:0009376
PDB:1E94 PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDBsum:1E94
PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY PDBsum:1HT1 PDBsum:1HT2
eggNOG:COG5405 HOGENOM:HOG000064533 KO:K01419 OMA:KDWRTDK
ProtClustDB:PRK05456 GO:GO:0005839 GO:GO:0004298 TIGRFAMs:TIGR03692
MEROPS:T01.006 EMBL:D89965 PIR:JT0760 RefSeq:NP_418367.1
RefSeq:YP_491519.1 PDB:1NED PDBsum:1NED ProteinModelPortal:P0A7B8
SMR:P0A7B8 DIP:DIP-35866N IntAct:P0A7B8 MINT:MINT-1218940
SWISS-2DPAGE:P0A7B8 PRIDE:P0A7B8 EnsemblBacteria:EBESCT00000003716
EnsemblBacteria:EBESCT00000017074 GeneID:12932787 GeneID:948429
KEGG:ecj:Y75_p3255 KEGG:eco:b3932 PATRIC:32123379 EchoBASE:EB1627
EcoGene:EG11676 BioCyc:EcoCyc:EG11676-MONOMER
BioCyc:ECOL316407:JW3903-MONOMER EvolutionaryTrace:P0A7B8
Genevestigator:P0A7B8 Uniprot:P0A7B8
Length = 176
Score = 428 (155.7 bits), Expect = 5.3e-39, P = 5.3e-39
Identities = 85/155 (54%), Positives = 108/155 (69%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR V + GDGQ T GN +MK + KKVR+LY ++V+AG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 140
E LE HQG+L++A+VELAK+WR DR LR+LEA+L A+ +LIITGNGDV++PEN
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 141 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
+AL ENTEL EI +K+L IA
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIA 156
Score = 428 (155.7 bits), Expect = 5.3e-39, P = 5.3e-39
Identities = 85/155 (54%), Positives = 108/155 (69%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR V + GDGQ T GN +MK + KKVR+LY ++V+AG AG TADAFTL + F
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXXX 738
E LE HQG+L++A+VELAK+WR DR LR+LEA+L A+ +LIITGNGDV++PEN
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 739 XXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
+AL ENTEL EI +K+L IA
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIA 156
>UNIPROTKB|Q3AB73 [details] [associations]
symbol:hslV "ATP-dependent protease subunit HslV"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353
InterPro:IPR022281 Pfam:PF00227 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0008233 GO:GO:0051603
GO:GO:0009376 RefSeq:YP_360611.1 ProteinModelPortal:Q3AB73
SMR:Q3AB73 STRING:Q3AB73 MEROPS:T01.007 GeneID:3728873
KEGG:chy:CHY_1791 PATRIC:21276693 eggNOG:COG5405
HOGENOM:HOG000064533 KO:K01419 OMA:KDWRTDK ProtClustDB:PRK05456
BioCyc:CHYD246194:GJCN-1790-MONOMER GO:GO:0005839 GO:GO:0004298
TIGRFAMs:TIGR03692 Uniprot:Q3AB73
Length = 179
Score = 421 (153.3 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 84/160 (52%), Positives = 112/160 (70%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 76
F+GTTI++V+RG +V++GGDGQVTFG ++K A K+RKLY+ +VLAG AG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 77 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 136
D FE LE+ QGNL RA+VEL K WR D+ LRRLEAMLL A+RE L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 137 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIAE 176
+ +AL +T L EI+ +SL IA+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQ 161
Score = 421 (153.3 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 84/160 (52%), Positives = 112/160 (70%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 674
F+GTTI++V+RG +V++GGDGQVTFG ++K A K+RKLY+ +VLAG AG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 675 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 734
D FE LE+ QGNL RA+VEL K WR D+ LRRLEAMLL A+RE L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 735 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIAE 774
+ +AL +T L EI+ +SL IA+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQ 161
>TIGR_CMR|CHY_1791 [details] [associations]
symbol:CHY_1791 "ATP-dependent protease HslV"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353
InterPro:IPR022281 Pfam:PF00227 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0008233 GO:GO:0051603
GO:GO:0009376 RefSeq:YP_360611.1 ProteinModelPortal:Q3AB73
SMR:Q3AB73 STRING:Q3AB73 MEROPS:T01.007 GeneID:3728873
KEGG:chy:CHY_1791 PATRIC:21276693 eggNOG:COG5405
HOGENOM:HOG000064533 KO:K01419 OMA:KDWRTDK ProtClustDB:PRK05456
BioCyc:CHYD246194:GJCN-1790-MONOMER GO:GO:0005839 GO:GO:0004298
TIGRFAMs:TIGR03692 Uniprot:Q3AB73
Length = 179
Score = 421 (153.3 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 84/160 (52%), Positives = 112/160 (70%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 76
F+GTTI++V+RG +V++GGDGQVTFG ++K A K+RKLY+ +VLAG AG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 77 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 136
D FE LE+ QGNL RA+VEL K WR D+ LRRLEAMLL A+RE L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 137 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIAE 176
+ +AL +T L EI+ +SL IA+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQ 161
Score = 421 (153.3 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 84/160 (52%), Positives = 112/160 (70%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 674
F+GTTI++V+RG +V++GGDGQVTFG ++K A K+RKLY+ +VLAG AG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 675 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 734
D FE LE+ QGNL RA+VEL K WR D+ LRRLEAMLL A+RE L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 735 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIAE 774
+ +AL +T L EI+ +SL IA+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQ 161
>DICTYBASE|DDB_G0269282 [details] [associations]
symbol:DDB_G0269282 "ATP-dependent protease hslV"
species:44689 "Dictyostelium discoideum" [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 dictyBase:DDB_G0269282 EMBL:AAFI02000005 GO:GO:0051603
GO:GO:0009376 eggNOG:COG5405 KO:K01419 GO:GO:0005839 GO:GO:0004298
TIGRFAMs:TIGR03692 RefSeq:XP_645845.1 ProteinModelPortal:Q55ED6
SMR:Q55ED6 STRING:Q55ED6 MEROPS:T01.018 EnsemblProtists:DDB0190148
GeneID:8616789 KEGG:ddi:DDB_G0269282 InParanoid:Q55ED6 OMA:LAQQWRT
ProtClustDB:CLSZ2431354 Uniprot:Q55ED6
Length = 324
Score = 368 (134.6 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 75/159 (47%), Positives = 105/159 (66%)
Query: 17 KFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 76
+ + TTILSVRR KV + GDGQVT G+ I+K +AKK+RKL +++AG AGS ADAFTL
Sbjct: 75 RMKATTILSVRRNGKVVIIGDGQVTLGHSIVKPNAKKIRKLSDGKIIAGFAGSVADAFTL 134
Query: 77 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 136
+ E L +H+G L+++ VELA++WR D+ RRLEA L+ A+++ TL I GNGDVLEP
Sbjct: 135 FELLERKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVLEPN 194
Query: 137 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
+ +AL +L P+EI ++S+ IA
Sbjct: 195 DGILAIGSGGDFALSAARALLTVPDLDPEEIARRSMKIA 233
Score = 368 (134.6 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 75/159 (47%), Positives = 105/159 (66%)
Query: 615 KFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 674
+ + TTILSVRR KV + GDGQVT G+ I+K +AKK+RKL +++AG AGS ADAFTL
Sbjct: 75 RMKATTILSVRRNGKVVIIGDGQVTLGHSIVKPNAKKIRKLSDGKIIAGFAGSVADAFTL 134
Query: 675 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 734
+ E L +H+G L+++ VELA++WR D+ RRLEA L+ A+++ TL I GNGDVLEP
Sbjct: 135 FELLERKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVLEPN 194
Query: 735 NXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 773
+ +AL +L P+EI ++S+ IA
Sbjct: 195 DGILAIGSGGDFALSAARALLTVPDLDPEEIARRSMKIA 233
>TIGR_CMR|NSE_0176 [details] [associations]
symbol:NSE_0176 "heat shock protein HslVU, HslV subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006508
"proteolysis" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00248 InterPro:IPR001353 InterPro:IPR022281
Pfam:PF00227 GO:GO:0006950 GO:GO:0046872 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0051603 GO:GO:0009376
eggNOG:COG5405 HOGENOM:HOG000064533 KO:K01419 OMA:KDWRTDK
ProtClustDB:PRK05456 GO:GO:0005839 GO:GO:0004298 TIGRFAMs:TIGR03692
MEROPS:T01.006 RefSeq:YP_506071.1 ProteinModelPortal:Q2GEM5
SMR:Q2GEM5 STRING:Q2GEM5 GeneID:3931981 KEGG:nse:NSE_0176
PATRIC:22680451 BioCyc:NSEN222891:GHFU-207-MONOMER Uniprot:Q2GEM5
Length = 188
Score = 365 (133.5 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 76/160 (47%), Positives = 109/160 (68%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 76
F GTTILS+R+ +KV + GDGQVT GN V++K++A+KV++L ++++G AGSTADAFTL
Sbjct: 5 FHGTTILSIRKDDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 64
Query: 77 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 136
+ E+ LE H G L+RA VELAK+WR D+ LRRLEAM++ A+ TLI+ G GDV+EPE
Sbjct: 65 FERLESKLEAHPGQLLRACVELAKDWRTDKFLRRLEAMMIVADARGTLILNGAGDVIEPE 124
Query: 137 NXXXXXXXXXXXXXXXXKALQEN-TELMPDEIIKKSLVIA 175
+ KAL + ++L +I + ++ IA
Sbjct: 125 DSVAAIGSGGNYALAAAKALIVHASDLDAFQIAEAAMKIA 164
Score = 365 (133.5 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 76/160 (47%), Positives = 109/160 (68%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 674
F GTTILS+R+ +KV + GDGQVT GN V++K++A+KV++L ++++G AGSTADAFTL
Sbjct: 5 FHGTTILSIRKDDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 64
Query: 675 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 734
+ E+ LE H G L+RA VELAK+WR D+ LRRLEAM++ A+ TLI+ G GDV+EPE
Sbjct: 65 FERLESKLEAHPGQLLRACVELAKDWRTDKFLRRLEAMMIVADARGTLILNGAGDVIEPE 124
Query: 735 NXXXXXXXXXXXXXXXXKALQEN-TELMPDEIIKKSLVIA 773
+ KAL + ++L +I + ++ IA
Sbjct: 125 DSVAAIGSGGNYALAAAKALIVHASDLDAFQIAEAAMKIA 164
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 216 (81.1 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 47/103 (45%), Positives = 65/103 (63%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR---QQITGPLQQEITPKNILMIGPTGVGKT 232
+I LD YVIGQ+ AKR +++A+ N ++R Q G E+ NIL+IGPTG GKT
Sbjct: 70 DICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQKAGS-DIELAKSNILLIGPTGCGKT 128
Query: 233 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 275
+A+ LA++ + PF +AT TE GYVG DV+ II L+ S
Sbjct: 129 LLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAS 171
Score = 216 (81.1 bits), Expect = 9.3e-29, Sum P(3) = 9.3e-29
Identities = 47/103 (45%), Positives = 65/103 (63%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR---QQITGPLQQEITPKNILMIGPTGVGKT 830
+I LD YVIGQ+ AKR +++A+ N ++R Q G E+ NIL+IGPTG GKT
Sbjct: 70 DICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQKAGS-DIELAKSNILLIGPTGCGKT 128
Query: 831 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 873
+A+ LA++ + PF +AT TE GYVG DV+ II L+ S
Sbjct: 129 LLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAS 171
Score = 135 (52.6 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L+ L I+T L KQY+ L E +++F DD ++ +A
Sbjct: 300 LIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIA 359
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFN---SNNIS-LLVDADYVNSRLGDLSINE 604
+ A I +T GAR L + ME +L + F+ +N++ ++V+ + V S L I
Sbjct: 360 KRA--IERKT---GARGLRSIMEDILLDTMFDLPSMDNVTKVVVNEEAVTSDAQPLLIYA 414
Query: 605 DLSR 608
D +
Sbjct: 415 DAEK 418
Score = 121 (47.7 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLVEGTTVNT- 463
++ Q + NVE Q GI+++DE+DKIT +S + T D+S GVQ+ LL L+EGT +
Sbjct: 166 KLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP 225
Query: 464 ----------KYGIIKTDHILFIASGAF 481
++ + T +ILFI GAF
Sbjct: 226 PQGGRKHPQQEFLQVDTTNILFICGGAF 253
Score = 121 (47.7 bits), Expect = 9.3e-29, Sum P(3) = 9.3e-29
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLVEGTTVNT- 1061
++ Q + NVE Q GI+++DE+DKIT +S + T D+S GVQ+ LL L+EGT +
Sbjct: 166 KLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP 225
Query: 1062 ----------KYGIIKTDHILFIASGAF 1079
++ + T +ILFI GAF
Sbjct: 226 PQGGRKHPQQEFLQVDTTNILFICGGAF 253
Score = 107 (42.7 bits), Expect = 9.3e-29, Sum P(3) = 9.3e-29
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L+ L I+T L KQY+ L E +++F DD ++ +A
Sbjct: 300 LIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIA 359
Query: 1147 EIA 1149
+ A
Sbjct: 360 KRA 362
Score = 40 (19.1 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 758 TELMPDEIIKKSLVIAEIVSEL 779
TEL P++++K L I E V L
Sbjct: 288 TELEPEDLLKFGL-IPEFVGRL 308
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 160 TELMPDEIIKKSLVIAEIVSEL 181
TEL P++++K L I E V L
Sbjct: 288 TELEPEDLLKFGL-IPEFVGRL 308
>GENEDB_PFALCIPARUM|PFL1465c [details] [associations]
symbol:PFL1465c "heat shock protein hslv,
putative" species:5833 "Plasmodium falciparum" [GO:0006986
"response to unfolded protein" evidence=ISS] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009408
"response to heat" evidence=ISS] InterPro:IPR001353
InterPro:IPR022281 Pfam:PF00227 GO:GO:0009408 EMBL:AE014188
GO:GO:0006986 GO:GO:0051603 GO:GO:0004176 GO:GO:0009376
HOGENOM:HOG000064533 KO:K01419 GO:GO:0005839 GO:GO:0004298
TIGRFAMs:TIGR03692 GenomeReviews:AE014188_GR MEROPS:T01.018
ProtClustDB:CLSZ2431354 RefSeq:XP_001350699.2
ProteinModelPortal:Q8I5B6 PRIDE:Q8I5B6
EnsemblProtists:PFL1465c:mRNA GeneID:811345 KEGG:pfa:PFL1465c
EuPathDB:PlasmoDB:PF3D7_1230400 Uniprot:Q8I5B6
Length = 207
Score = 344 (126.2 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 80/188 (42%), Positives = 112/188 (59%)
Query: 591 DYVNSRLGDLSINEDLSR-YDSGMEKF----QGTTILSVRRGNKVSLGGDGQVTFGNVIM 645
++VN SI + ++R Y S K GTTIL VR+ N+V L GDG V+ G +I+
Sbjct: 5 NFVNIIGSQKSITKTIARNYFSDNSKLIIPRHGTTILCVRKNNEVCLIGDGMVSQGTMIV 64
Query: 646 KNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKEWRNDRT 705
K +AKK+R+L N +L G AG+TAD FTLLD FE ++++ L+R+ VELAK WR DR
Sbjct: 65 KGNAKKIRRLKDN-ILMGFAGATADCFTLLDKFETKIDEYPNQLLRSCVELAKLWRTDRY 123
Query: 706 LRRLEAMLLTANRETTLIITGNGDVLEPENXXXXXXXXXXXXXXXXKALQENTELMPDEI 765
LR LEA+L+ A+++ L +TGNGDVLEP +AL + L +I
Sbjct: 124 LRHLEAVLIVADKDILLEVTGNGDVLEPSGNVLGTGSGGPYAMAAARALYDVENLSAKDI 183
Query: 766 IKKSLVIA 773
K++ IA
Sbjct: 184 AYKAMNIA 191
Score = 339 (124.4 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 72/156 (46%), Positives = 99/156 (63%)
Query: 20 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 79
GTTIL VR+ N+V L GDG V+ G +I+K +AKK+R+L N +L G AG+TAD FTLLD
Sbjct: 37 GTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLDK 95
Query: 80 FEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXX 139
FE ++++ L+R+ VELAK WR DR LR LEA+L+ A+++ L +TGNGDVLEP
Sbjct: 96 FETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDILLEVTGNGDVLEPSGNV 155
Query: 140 XXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
+AL + L +I K++ IA
Sbjct: 156 LGTGSGGPYAMAAARALYDVENLSAKDIAYKAMNIA 191
>UNIPROTKB|Q8I5B6 [details] [associations]
symbol:HslV "Heat shock protein hslv" species:36329
"Plasmodium falciparum 3D7" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISS] [GO:0006986 "response to unfolded protein"
evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
InterPro:IPR001353 InterPro:IPR022281 Pfam:PF00227 GO:GO:0009408
EMBL:AE014188 GO:GO:0006986 GO:GO:0051603 GO:GO:0004176
GO:GO:0009376 HOGENOM:HOG000064533 KO:K01419 GO:GO:0005839
GO:GO:0004298 TIGRFAMs:TIGR03692 GenomeReviews:AE014188_GR
MEROPS:T01.018 ProtClustDB:CLSZ2431354 RefSeq:XP_001350699.2
ProteinModelPortal:Q8I5B6 PRIDE:Q8I5B6
EnsemblProtists:PFL1465c:mRNA GeneID:811345 KEGG:pfa:PFL1465c
EuPathDB:PlasmoDB:PF3D7_1230400 Uniprot:Q8I5B6
Length = 207
Score = 344 (126.2 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 80/188 (42%), Positives = 112/188 (59%)
Query: 591 DYVNSRLGDLSINEDLSR-YDSGMEKF----QGTTILSVRRGNKVSLGGDGQVTFGNVIM 645
++VN SI + ++R Y S K GTTIL VR+ N+V L GDG V+ G +I+
Sbjct: 5 NFVNIIGSQKSITKTIARNYFSDNSKLIIPRHGTTILCVRKNNEVCLIGDGMVSQGTMIV 64
Query: 646 KNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKEWRNDRT 705
K +AKK+R+L N +L G AG+TAD FTLLD FE ++++ L+R+ VELAK WR DR
Sbjct: 65 KGNAKKIRRLKDN-ILMGFAGATADCFTLLDKFETKIDEYPNQLLRSCVELAKLWRTDRY 123
Query: 706 LRRLEAMLLTANRETTLIITGNGDVLEPENXXXXXXXXXXXXXXXXKALQENTELMPDEI 765
LR LEA+L+ A+++ L +TGNGDVLEP +AL + L +I
Sbjct: 124 LRHLEAVLIVADKDILLEVTGNGDVLEPSGNVLGTGSGGPYAMAAARALYDVENLSAKDI 183
Query: 766 IKKSLVIA 773
K++ IA
Sbjct: 184 AYKAMNIA 191
Score = 339 (124.4 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 72/156 (46%), Positives = 99/156 (63%)
Query: 20 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 79
GTTIL VR+ N+V L GDG V+ G +I+K +AKK+R+L N +L G AG+TAD FTLLD
Sbjct: 37 GTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLDK 95
Query: 80 FEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENXX 139
FE ++++ L+R+ VELAK WR DR LR LEA+L+ A+++ L +TGNGDVLEP
Sbjct: 96 FETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDILLEVTGNGDVLEPSGNV 155
Query: 140 XXXXXXXXXXXXXXKALQENTELMPDEIIKKSLVIA 175
+AL + L +I K++ IA
Sbjct: 156 LGTGSGGPYAMAAARALYDVENLSAKDIAYKAMNIA 191
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 242 (90.2 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 59/152 (38%), Positives = 91/152 (59%)
Query: 156 LQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 214
L ++ EL +E+ K EI + LD+YVIGQ AK+ +A+A+ N ++R + G +
Sbjct: 46 LADDLELSLEELPKPQ----EIKAYLDQYVIGQEEAKKVLAVAVYNHYKRINLGGKIDDV 101
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI-- 272
E++ NILM+GPTG GKT +A+ LA+ N PF +AT TE GYVG DV+ I+ LI
Sbjct: 102 ELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKLIQN 161
Query: 273 -DISIKQTREF-----EINKVRTRAEDAAEDR 298
D I++ + EI+K+ ++E+ + R
Sbjct: 162 ADYDIERAEKGIVYIDEIDKIARKSENPSITR 193
Score = 242 (90.2 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 59/152 (38%), Positives = 91/152 (59%)
Query: 754 LQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 812
L ++ EL +E+ K EI + LD+YVIGQ AK+ +A+A+ N ++R + G +
Sbjct: 46 LADDLELSLEELPKPQ----EIKAYLDQYVIGQEEAKKVLAVAVYNHYKRINLGGKIDDV 101
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI-- 870
E++ NILM+GPTG GKT +A+ LA+ N PF +AT TE GYVG DV+ I+ LI
Sbjct: 102 ELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKLIQN 161
Query: 871 -DISIKQTREF-----EINKVRTRAEDAAEDR 896
D I++ + EI+K+ ++E+ + R
Sbjct: 162 ADYDIERAEKGIVYIDEIDKIARKSENPSITR 193
Score = 142 (55.0 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR PI V LD+L RI+T L KQY+ L +G+ +EF +D ++ +A
Sbjct: 291 LIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLFELDGVTLEFEEDALRAIA 350
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFN----SNNISLLVDADYVNSR 596
+ A N GAR L +E+++ +V + + I +V D + ++
Sbjct: 351 QKAI-----KRNTGARGLRAILEEVMLDVMYEIPSRKDIIKCIVTRDVIENK 397
Score = 125 (49.1 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR PI V LD+L RI+T L KQY+ L +G+ +EF +D ++ +A
Sbjct: 291 LIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLFELDGVTLEFEEDALRAIA 350
Query: 1147 EIA 1149
+ A
Sbjct: 351 QKA 353
Score = 110 (43.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 452
+ E+ +L + + Q A ++E + GI+++DEIDKI +S + T D+S GVQ+ L
Sbjct: 147 VGEDVENILLK--LIQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQAL 204
Query: 453 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
L ++EGT + ++ I T +ILFI GAF
Sbjct: 205 LKILEGTIASVPPQGGRKHPHQEFIQIDTTNILFIVGGAF 244
Score = 110 (43.8 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 1050
+ E+ +L + + Q A ++E + GI+++DEIDKI +S + T D+S GVQ+ L
Sbjct: 147 VGEDVENILLK--LIQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQAL 204
Query: 1051 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
L ++EGT + ++ I T +ILFI GAF
Sbjct: 205 LKILEGTIASVPPQGGRKHPHQEFIQIDTTNILFIVGGAF 244
Score = 61 (26.5 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 786 QNR-AKRAVAIALRNRWRRQQITGPLQQEITPKNILMIG--PTGVGKTEIARRLAKLSNA 842
QNR K+ + + +R+Q G + + I P+++L G P VG+ I L L
Sbjct: 252 QNRIGKKGLGFGAEIKPKREQNVGEILKHIMPEDLLKFGLIPEFVGRLPIIVTLDALDED 311
Query: 843 PFIKI 847
++I
Sbjct: 312 ALVRI 316
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 156 (60.0 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 40/108 (37%), Positives = 62/108 (57%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GRFP+ V SL++S RI+T L QY+ALL + + + F +D ++ +A
Sbjct: 527 MIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIA 586
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYV 593
++A ER + GAR L + ME+LL + F S+ + + ADYV
Sbjct: 587 QLAM---ER--HTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYV 629
Score = 139 (54.0 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NI+M+GPTG GKT IA+ +AK + PF + T T+ GYVG D++++I L+
Sbjct: 324 KLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLL 381
Score = 139 (54.0 bits), Expect = 6.0e-24, Sum P(4) = 6.0e-24
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NI+M+GPTG GKT IA+ +AK + PF + T T+ GYVG D++++I L+
Sbjct: 324 KLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLL 381
Score = 128 (50.1 bits), Expect = 6.0e-24, Sum P(4) = 6.0e-24
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GRFP+ V SL++S RI+T L QY+ALL + + + F +D ++ +A
Sbjct: 527 MIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIA 586
Query: 1147 EIA 1149
++A
Sbjct: 587 QLA 589
Score = 118 (46.6 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLL 453
+ E+ ++++ + Q A NVE Q GI+FLDE+DKI + D+ GVQ+ +L
Sbjct: 369 VGEDIESVISK--LLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGML 426
Query: 454 PLVEGTTVNTKY--------GI---IKTDHILFIASGAF 481
++EGT VN G + T +ILF+ASGA+
Sbjct: 427 KMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAY 465
Score = 118 (46.6 bits), Expect = 6.0e-24, Sum P(4) = 6.0e-24
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLL 1051
+ E+ ++++ + Q A NVE Q GI+FLDE+DKI + D+ GVQ+ +L
Sbjct: 369 VGEDIESVISK--LLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGML 426
Query: 1052 PLVEGTTVNTKY--------GI---IKTDHILFIASGAF 1079
++EGT VN G + T +ILF+ASGA+
Sbjct: 427 KMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAY 465
Score = 74 (31.1 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 205
+I+ LDK+V+GQ+ AK+ +A+A+ N ++R
Sbjct: 194 KIMEYLDKHVVGQDFAKKVLAVAVYNHYKR 223
Score = 74 (31.1 bits), Expect = 6.0e-24, Sum P(4) = 6.0e-24
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 803
+I+ LDK+V+GQ+ AK+ +A+A+ N ++R
Sbjct: 194 KIMEYLDKHVVGQDFAKKVLAVAVYNHYKR 223
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 230 (86.0 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 157 QENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-E 215
+E E+ P K E+ + LD YVIGQ+RAK+ +++A+ N ++R + + P E
Sbjct: 51 EEIKEISPKRDNDKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPKDGVE 110
Query: 216 ITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI--- 272
+ NIL+IGPTG GKT +A LA+ N PF +AT TE GYVG DV+ II+ L+
Sbjct: 111 LGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKC 170
Query: 273 DISIKQTREF-----EINKVRTRAEDAAEDR 298
D +++ + EI+K+ ++++ + R
Sbjct: 171 DYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Score = 230 (86.0 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 755 QENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-E 813
+E E+ P K E+ + LD YVIGQ+RAK+ +++A+ N ++R + + P E
Sbjct: 51 EEIKEISPKRDNDKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPKDGVE 110
Query: 814 ITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI--- 870
+ NIL+IGPTG GKT +A LA+ N PF +AT TE GYVG DV+ II+ L+
Sbjct: 111 LGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKC 170
Query: 871 DISIKQTREF-----EINKVRTRAEDAAEDR 896
D +++ + EI+K+ ++++ + R
Sbjct: 171 DYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Score = 134 (52.2 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L L +I++ LTKQY AL EG+++EF +D ++ +A
Sbjct: 301 LIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIA 360
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS----LLVDADYVNSRLGDLSINE 604
A ++ +T GAR L + +E +L + ++ +I +VD VN + I E
Sbjct: 361 HKA--MSRKT---GARGLRSIVEGILLDTMYDIPSIDGVVKAVVDESVVNGESAPILIYE 415
Score = 119 (46.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 452
+ E+ ++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ L
Sbjct: 155 VGEDVENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 212
Query: 453 LPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 481
L L+EGT ++ + T ILFI GAF
Sbjct: 213 LKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 119 (46.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 1050
+ E+ ++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ L
Sbjct: 155 VGEDVENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 212
Query: 1051 LPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 1079
L L+EGT ++ + T ILFI GAF
Sbjct: 213 LKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 114 (45.2 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L L +I++ LTKQY AL EG+++EF +D ++ +A
Sbjct: 301 LIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIA 360
Query: 1147 EIA 1149
A
Sbjct: 361 HKA 363
Score = 45 (20.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 390 EAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQ 449
EA+ ++ E N L Q A+ +E + F ++ K + + T G
Sbjct: 321 EALVQILSEPKNALTK----QYNALFEMEGVELEFREDALKAIAHKAMSRKT-----GA- 370
Query: 450 RDLLPLVEGTTVNTKYGIIKTDHIL 474
R L +VEG ++T Y I D ++
Sbjct: 371 RGLRSIVEGILLDTMYDIPSIDGVV 395
Score = 45 (20.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 988 EAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQ 1047
EA+ ++ E N L Q A+ +E + F ++ K + + T G
Sbjct: 321 EALVQILSEPKNALTK----QYNALFEMEGVELEFREDALKAIAHKAMSRKT-----GA- 370
Query: 1048 RDLLPLVEGTTVNTKYGIIKTDHIL 1072
R L +VEG ++T Y I D ++
Sbjct: 371 RGLRSIVEGILLDTMYDIPSIDGVV 395
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 225 (84.3 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 57/138 (41%), Positives = 82/138 (59%)
Query: 175 AEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQI--TGPLQQ----EITPKNILMIGPTG 228
AEI L+ YVIGQ+ AKR +A+A+ N ++R Q G + E+T NILM+GPTG
Sbjct: 65 AEIREFLEGYVIGQDTAKRTLAVAVYNHYKRIQAGEKGRDSRCEPVELTKSNILMLGPTG 124
Query: 229 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF--- 282
GKT +A+ LAK+ N PF +AT TE GYVG DV+ I+ LI D +K+
Sbjct: 125 CGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVKRAETGIIY 184
Query: 283 --EINKVRTRAEDAAEDR 298
E++K+ ++E+ + R
Sbjct: 185 IDEVDKIARKSENPSITR 202
Score = 225 (84.3 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 57/138 (41%), Positives = 82/138 (59%)
Query: 773 AEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQI--TGPLQQ----EITPKNILMIGPTG 826
AEI L+ YVIGQ+ AKR +A+A+ N ++R Q G + E+T NILM+GPTG
Sbjct: 65 AEIREFLEGYVIGQDTAKRTLAVAVYNHYKRIQAGEKGRDSRCEPVELTKSNILMLGPTG 124
Query: 827 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF--- 880
GKT +A+ LAK+ N PF +AT TE GYVG DV+ I+ LI D +K+
Sbjct: 125 CGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVKRAETGIIY 184
Query: 881 --EINKVRTRAEDAAEDR 896
E++K+ ++E+ + R
Sbjct: 185 IDEVDKIARKSENPSITR 202
Score = 136 (52.9 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 40/123 (32%), Positives = 61/123 (49%)
Query: 458 GTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTS 517
G V +K I TDH + L K LIPE GR P+ + +L +I++
Sbjct: 272 GAEVRSKAEIDTTDHFADVMPE--DLIK-FGLIPEFIGRLPVVASVTNLDKESLVKILSE 328
Query: 518 TNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEV 577
L KQY L +G+++EF DD ++ +A+ A I+ T GAR L ME++L V
Sbjct: 329 PKNALVKQYIRLFEMDGVELEFTDDALEAIADQA--IHRGT---GARGLRAIMEEVLLPV 383
Query: 578 SFN 580
++
Sbjct: 384 MYD 386
Score = 119 (46.9 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 1056 GTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTS 1115
G V +K I TDH + L K LIPE GR P+ + +L +I++
Sbjct: 272 GAEVRSKAEIDTTDHFADVMPE--DLIK-FGLIPEFIGRLPVVASVTNLDKESLVKILSE 328
Query: 1116 TNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIA 1149
L KQY L +G+++EF DD ++ +A+ A
Sbjct: 329 PKNALVKQYIRLFEMDGVELEFTDDALEAIADQA 362
Score = 114 (45.2 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 1017 QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLVEGTTVNT-----------KYG 1064
+ GII++DE+DKI +S + T D+S GVQ+ LL ++EGT + ++
Sbjct: 179 ETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQASVPPQGGRKHPHQEFI 238
Query: 1065 IIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQY 1124
I T ++LFI +GAF A +I E RV L + + + T +
Sbjct: 239 QIDTTNVLFIVAGAF--AGLEKIIYE-------RVGKRGLGFG--AEVRSKAEIDTTDHF 287
Query: 1125 EALLATEGIKIEFVDDGIQRLAEIAYCINERTENIVII 1162
++ + IK + + I RL +A N E++V I
Sbjct: 288 ADVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESLVKI 325
Score = 109 (43.4 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 419 QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLVEGTTVNT-----------KYG 466
+ GII++DE+DKI +S + T D+S GVQ+ LL ++EGT + ++
Sbjct: 179 ETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQASVPPQGGRKHPHQEFI 238
Query: 467 IIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQY 526
I T ++LFI +GAF A +I E RV L + + + T +
Sbjct: 239 QIDTTNVLFIVAGAF--AGLEKIIYE-------RVGKRGLGFG--AEVRSKAEIDTTDHF 287
Query: 527 EALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 561
++ + IK + + I RL +A N E++
Sbjct: 288 ADVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESL 322
Score = 37 (18.1 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 759 ELMPDEIIKKSLVIAEIVSEL 779
++MP+++IK L I E + L
Sbjct: 289 DVMPEDLIKFGL-IPEFIGRL 308
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 135 (52.6 bits), Expect = 6.8e-24, Sum P(5) = 6.8e-24
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 213 QQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
Q +I N+L++GP+GVGKT + R LA++ + PF + T FT+ GY+G D + + L+
Sbjct: 195 QLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGYIGDDAEVCVHRLL 254
Score = 135 (52.6 bits), Expect = 5.5e-21, Sum P(5) = 5.5e-21
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 811 QQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
Q +I N+L++GP+GVGKT + R LA++ + PF + T FT+ GY+G D + + L+
Sbjct: 195 QLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGYIGDDAEVCVHRLL 254
Score = 131 (51.2 bits), Expect = 6.8e-24, Sum P(5) = 6.8e-24
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 490 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 549
IPEL GR P+ L +LS RI+T L QY L + GI++ F + ++A
Sbjct: 463 IPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGIELRFTTPALHKIAA 522
Query: 550 IAYCINERTENIGARRLYTAMEKLLEEVSFNSNNISL 586
A+ T GAR L T ME +L + F + S+
Sbjct: 523 NAF-----TMGTGARALRTEMETILSDAMFETPGSSV 554
Score = 103 (41.3 bits), Expect = 6.8e-24, Sum P(5) = 6.8e-24
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 416 NVEQ--NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 464
+VEQ GII LDEIDKI + ++ D+ +GVQ LL L+EGTTV +
Sbjct: 260 DVEQAERGIIVLDEIDKIAA-AKVSHGRDVGGSGVQESLLKLLEGTTVQVQ 309
Score = 103 (41.3 bits), Expect = 5.5e-21, Sum P(5) = 5.5e-21
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 1014 NVEQ--NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 1062
+VEQ GII LDEIDKI + ++ D+ +GVQ LL L+EGTTV +
Sbjct: 260 DVEQAERGIIVLDEIDKIAA-AKVSHGRDVGGSGVQESLLKLLEGTTVQVQ 309
Score = 102 (41.0 bits), Expect = 5.5e-21, Sum P(5) = 5.5e-21
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 1088 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 1147
IPEL GR P+ L +LS RI+T L QY L + GI++ F + ++A
Sbjct: 463 IPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGIELRFTTPALHKIAA 522
Query: 1148 IAY 1150
A+
Sbjct: 523 NAF 525
Score = 74 (31.1 bits), Expect = 6.8e-24, Sum P(5) = 6.8e-24
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 181 LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQE 215
LD++V+GQ RAK+ +++A+ N ++R Q Q+E
Sbjct: 88 LDQFVVGQERAKKILSVAVYNHYQRVQELQRRQEE 122
Score = 74 (31.1 bits), Expect = 5.5e-21, Sum P(5) = 5.5e-21
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 779 LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQE 813
LD++V+GQ RAK+ +++A+ N ++R Q Q+E
Sbjct: 88 LDQFVVGQERAKKILSVAVYNHYQRVQELQRRQEE 122
Score = 55 (24.4 bits), Expect = 6.8e-24, Sum P(5) = 6.8e-24
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 468 IKTDHILFIASGAF 481
++TD+ILFI SGAF
Sbjct: 355 VRTDNILFICSGAF 368
Score = 55 (24.4 bits), Expect = 5.5e-21, Sum P(5) = 5.5e-21
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 1066 IKTDHILFIASGAF 1079
++TD+ILFI SGAF
Sbjct: 355 VRTDNILFICSGAF 368
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 141 (54.7 bits), Expect = 8.7e-24, Sum P(4) = 8.7e-24
Identities = 43/101 (42%), Positives = 54/101 (53%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT--DISRAGVQRD 451
+ E+ ++ + + Q A NVE Q GI+FLDE+DKI ++ D+S GVQ
Sbjct: 299 VGEDVESVIQK--LVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHA 356
Query: 452 LLPLVEGTTVNTKYGI-----------IKTDHILFIASGAF 481
LL LVEGT VN K G I T ILFIASGAF
Sbjct: 357 LLKLVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAF 397
Score = 141 (54.7 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 43/101 (42%), Positives = 54/101 (53%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT--DISRAGVQRD 1049
+ E+ ++ + + Q A NVE Q GI+FLDE+DKI ++ D+S GVQ
Sbjct: 299 VGEDVESVIQK--LVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHA 356
Query: 1050 LLPLVEGTTVNTKYGI-----------IKTDHILFIASGAF 1079
LL LVEGT VN K G I T ILFIASGAF
Sbjct: 357 LLKLVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAF 397
Score = 134 (52.2 bits), Expect = 8.7e-24, Sum P(4) = 8.7e-24
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
N+L++GP+GVGKT + + LA++ + P + T T+ GYVG DV+++I+ L+
Sbjct: 259 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLV 311
Score = 134 (52.2 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
N+L++GP+GVGKT + + LA++ + P + T T+ GYVG DV+++I+ L+
Sbjct: 259 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLV 311
Score = 107 (42.7 bits), Expect = 8.7e-24, Sum P(4) = 8.7e-24
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
++PEL GRFP+ V S R+MT L Q + + + + F + ++++A
Sbjct: 454 MVPELVGRFPVLVPFHSFDKQMLVRVMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVA 513
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF 579
++A ++ +T GAR L + +E L E F
Sbjct: 514 QLA--LDRKT---GARALRSILEAALLEAKF 539
Score = 88 (36.0 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
++PEL GRFP+ V S R+MT L Q + + + + F + ++++A
Sbjct: 454 MVPELVGRFPVLVPFHSFDKQMLVRVMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVA 513
Query: 1147 EIA 1149
++A
Sbjct: 514 QLA 516
Score = 72 (30.4 bits), Expect = 8.7e-24, Sum P(4) = 8.7e-24
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 205
+I LDK+V+GQ +AK+ +A+ + +RR
Sbjct: 132 QIAEYLDKFVVGQKKAKKTLAVGVYQHYRR 161
Score = 72 (30.4 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 803
+I LDK+V+GQ +AK+ +A+ + +RR
Sbjct: 132 QIAEYLDKFVVGQKKAKKTLAVGVYQHYRR 161
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 140 (54.3 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 43/98 (43%), Positives = 55/98 (56%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQ---NNNTDISRAGVQR 450
+D KLL E A+ ++E Q GI+FLDE DKI T S + N D+S GVQ+
Sbjct: 240 VDTVIQKLLAE------AMGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQ 293
Query: 451 DLLPLVEGTTVNTKYGI-------IKTDHILFIASGAF 481
LL LVEG+ V + + I T +ILFIASGAF
Sbjct: 294 ALLKLVEGSLVKVRDPLAPNSKVTIDTSNILFIASGAF 331
Score = 140 (54.3 bits), Expect = 3.7e-22, Sum P(4) = 3.7e-22
Identities = 43/98 (43%), Positives = 55/98 (56%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQ---NNNTDISRAGVQR 1048
+D KLL E A+ ++E Q GI+FLDE DKI T S + N D+S GVQ+
Sbjct: 240 VDTVIQKLLAE------AMGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQ 293
Query: 1049 DLLPLVEGTTVNTKYGI-------IKTDHILFIASGAF 1079
LL LVEG+ V + + I T +ILFIASGAF
Sbjct: 294 ALLKLVEGSLVKVRDPLAPNSKVTIDTSNILFIASGAF 331
Score = 126 (49.4 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 213 QQEITPK-NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 271
Q I K N++++G +G GKT + ++LA++ + P + + T T+ GYVG DVDT+I+ L
Sbjct: 188 QDMILDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQKL 247
Query: 272 I 272
+
Sbjct: 248 L 248
Score = 126 (49.4 bits), Expect = 3.7e-22, Sum P(4) = 3.7e-22
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 811 QQEITPK-NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 869
Q I K N++++G +G GKT + ++LA++ + P + + T T+ GYVG DVDT+I+ L
Sbjct: 188 QDMILDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQKL 247
Query: 870 I 870
+
Sbjct: 248 L 248
Score = 100 (40.3 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPEL GRFP+ V L + ++T L Q + E +++ F I+ +A
Sbjct: 396 MIPELVGRFPVIVPFHCLDKTHLMSVLTEPRGSLIAQTKKFFENENVELRFSPAAIEAIA 455
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF 579
E+A + +T GAR L + +EK + +
Sbjct: 456 EMA--VKRKT---GARALKSIVEKAVMNAKY 481
Score = 86 (35.3 bits), Expect = 3.7e-22, Sum P(4) = 3.7e-22
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPEL GRFP+ V L + ++T L Q + E +++ F I+ +A
Sbjct: 396 MIPELVGRFPVIVPFHCLDKTHLMSVLTEPRGSLIAQTKKFFENENVELRFSPAAIEAIA 455
Query: 1147 EIA 1149
E+A
Sbjct: 456 EMA 458
Score = 83 (34.3 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 169 KKSLVI--AEIVSELDKYVIGQNRAKRAVAIALRNRWRR 205
+K L++ EIV L+KYV+GQ AK+ +A+A+ +RR
Sbjct: 94 EKKLILHPKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRR 132
Score = 83 (34.3 bits), Expect = 3.7e-22, Sum P(4) = 3.7e-22
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 767 KKSLVI--AEIVSELDKYVIGQNRAKRAVAIALRNRWRR 803
+K L++ EIV L+KYV+GQ AK+ +A+A+ +RR
Sbjct: 94 EKKLILHPKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRR 132
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 231 (86.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 55/152 (36%), Positives = 93/152 (61%)
Query: 156 LQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 214
LQE E +P + + L EI LD+YVIGQ +K+ +++A+ N ++R + +G + +
Sbjct: 44 LQE--ENLPAKQGRFDLKPREIKEVLDEYVIGQEHSKKVLSVAVYNHYKRLRNSGVISEV 101
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI-- 272
EI+ N+L+IGPTG GKT +AR LA++ PF +AT TE GYVG DV+ I+ L+
Sbjct: 102 EISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQA 161
Query: 273 -DISIKQTREF-----EINKVRTRAEDAAEDR 298
+ +++ + E++K+ ++E+A+ R
Sbjct: 162 ANFNVEAAQRGIIYIDEVDKISRKSENASITR 193
Score = 231 (86.4 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 55/152 (36%), Positives = 93/152 (61%)
Query: 754 LQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 812
LQE E +P + + L EI LD+YVIGQ +K+ +++A+ N ++R + +G + +
Sbjct: 44 LQE--ENLPAKQGRFDLKPREIKEVLDEYVIGQEHSKKVLSVAVYNHYKRLRNSGVISEV 101
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI-- 870
EI+ N+L+IGPTG GKT +AR LA++ PF +AT TE GYVG DV+ I+ L+
Sbjct: 102 EISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQA 161
Query: 871 -DISIKQTREF-----EINKVRTRAEDAAEDR 896
+ +++ + E++K+ ++E+A+ R
Sbjct: 162 ANFNVEAAQRGIIYIDEVDKISRKSENASITR 193
Score = 129 (50.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 55/165 (33%), Positives = 85/165 (51%)
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
KRLR + + E+EI ++ + ++ P G + T +T+ V+ + E
Sbjct: 90 KRLRNSGVIS-EVEISKSN----VLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTE 143
Query: 391 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 447
A + D E N LL ++ Q A NVE Q GII++DE+DKI+ +S + T D+S G
Sbjct: 144 AGYVGEDVE-NILL---KLLQAANFNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEG 199
Query: 448 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
VQ+ LL ++EGT + ++ I TD+ILFI GAF
Sbjct: 200 VQQALLKVIEGTVSSVPPQGGRKHPHQEFIQISTDNILFIFGGAF 244
Score = 129 (50.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 55/165 (33%), Positives = 85/165 (51%)
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
KRLR + + E+EI ++ + ++ P G + T +T+ V+ + E
Sbjct: 90 KRLRNSGVIS-EVEISKSN----VLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTE 143
Query: 989 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 1045
A + D E N LL ++ Q A NVE Q GII++DE+DKI+ +S + T D+S G
Sbjct: 144 AGYVGEDVE-NILL---KLLQAANFNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEG 199
Query: 1046 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
VQ+ LL ++EGT + ++ I TD+ILFI GAF
Sbjct: 200 VQQALLKVIEGTVSSVPPQGGRKHPHQEFIQISTDNILFIFGGAF 244
Score = 118 (46.6 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 484 AKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIE 538
A+P DL IPE GR P+ L L + R++ L KQY L + ++++
Sbjct: 280 AEPEDLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFEMDNLELK 339
Query: 539 FVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFN 580
F DD + +A A +R N GAR L ME LL + F+
Sbjct: 340 FDDDALMAIARKAV---DR--NTGARGLRAIMESLLLDFMFD 376
Score = 95 (38.5 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 1082 AKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIE 1136
A+P DL IPE GR P+ L L + R++ L KQY L + ++++
Sbjct: 280 AEPEDLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFEMDNLELK 339
Query: 1137 FVDDGIQRLAEIA 1149
F DD + +A A
Sbjct: 340 FDDDALMAIARKA 352
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 206 (77.6 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 51/140 (36%), Positives = 82/140 (58%)
Query: 170 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ---EITPKNILMIGP 226
K + E+ + LD+YVIGQ+RAK+ ++ + N ++R LQ E+ NIL++GP
Sbjct: 59 KDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRL-FKAELQDDDTELFKSNILLVGP 117
Query: 227 TGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTRE-- 281
TG GKT +A+ LAK + P +AT TE GYVG DV+ I+ L+ D +++ ++
Sbjct: 118 TGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAADGDVQRAQKGI 177
Query: 282 -F--EINKVRTRAEDAAEDR 298
F EI+K+ +E+ + R
Sbjct: 178 VFIDEIDKIARMSENRSITR 197
Score = 206 (77.6 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 51/140 (36%), Positives = 82/140 (58%)
Query: 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ---EITPKNILMIGP 824
K + E+ + LD+YVIGQ+RAK+ ++ + N ++R LQ E+ NIL++GP
Sbjct: 59 KDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRL-FKAELQDDDTELFKSNILLVGP 117
Query: 825 TGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTRE-- 879
TG GKT +A+ LAK + P +AT TE GYVG DV+ I+ L+ D +++ ++
Sbjct: 118 TGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAADGDVQRAQKGI 177
Query: 880 -F--EINKVRTRAEDAAEDR 896
F EI+K+ +E+ + R
Sbjct: 178 VFIDEIDKIARMSENRSITR 197
Score = 145 (56.1 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPEL GR + L+ L+ D RI+T + KQY+ L A +G+ ++F +D ++ +A
Sbjct: 291 LIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDGVNLKFEEDALRAIA 350
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFNS---NNISLLVDADYVNSRLGDLSINED 605
++A + +T GAR L + +E+++ ++ F N +++ + V L I
Sbjct: 351 QLA--LERKT---GARGLRSIIEEMMVDLMFELPEYKNYDIVITKEVVKDNAKALLIKRK 405
Query: 606 LS 607
+S
Sbjct: 406 IS 407
Score = 124 (48.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 452
+ E+ +L + Q A +V+ Q GI+F+DEIDKI S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILTR--LLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQAL 208
Query: 453 LPLVEGTTVNT--KYGI---------IKTDHILFIASGAF 481
L ++EG+ VN K G I T +ILF+ GAF
Sbjct: 209 LKIIEGSLVNIPPKGGRKHPNQEFIQIDTSNILFVCGGAF 248
Score = 124 (48.7 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 1050
+ E+ +L + Q A +V+ Q GI+F+DEIDKI S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILTR--LLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQAL 208
Query: 1051 LPLVEGTTVNT--KYGI---------IKTDHILFIASGAF 1079
L ++EG+ VN K G I T +ILF+ GAF
Sbjct: 209 LKIIEGSLVNIPPKGGRKHPNQEFIQIDTSNILFVCGGAF 248
Score = 123 (48.4 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPEL GR + L+ L+ D RI+T + KQY+ L A +G+ ++F +D ++ +A
Sbjct: 291 LIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDGVNLKFEEDALRAIA 350
Query: 1147 EIA 1149
++A
Sbjct: 351 QLA 353
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 219 (82.2 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 52/122 (42%), Positives = 74/122 (60%)
Query: 169 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQ-QITGPLQQEITPKNILMIGPT 227
KK EI LD+YVIGQ AK+ +++A+ N ++R T EI+ NIL+IGPT
Sbjct: 58 KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKKDSVEISKSNILLIGPT 117
Query: 228 GVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKV 287
G GKT +A+ LAK+ + PF +AT TE GYVG DV+ II+ L+ Q +++ K
Sbjct: 118 GSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENIIQKLL-----QKCNYDVEKA 172
Query: 288 RT 289
+T
Sbjct: 173 KT 174
Score = 219 (82.2 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 52/122 (42%), Positives = 74/122 (60%)
Query: 767 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQ-QITGPLQQEITPKNILMIGPT 825
KK EI LD+YVIGQ AK+ +++A+ N ++R T EI+ NIL+IGPT
Sbjct: 58 KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKKDSVEISKSNILLIGPT 117
Query: 826 GVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKV 885
G GKT +A+ LAK+ + PF +AT TE GYVG DV+ II+ L+ Q +++ K
Sbjct: 118 GSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVENIIQKLL-----QKCNYDVEKA 172
Query: 886 RT 887
+T
Sbjct: 173 KT 174
Score = 130 (50.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR PI L+ L RI+T L KQY L EG++I+F +D ++ +A
Sbjct: 296 LIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIA 355
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFN 580
+ A I ++T GAR L + +E L ++ ++
Sbjct: 356 KRA--IQQKT---GARGLRSIVEHTLLDLMYD 382
Score = 119 (46.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 396 IDEEANKLLNEDEIQQKAINNVEQ--NGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 452
+ E+ ++ + + QK +VE+ GII++DEIDKI ++ + T D+S GVQ+ L
Sbjct: 150 VGEDVENIIQK--LLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQAL 207
Query: 453 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
L L+EGT + +Y + T +ILFI GAF
Sbjct: 208 LKLIEGTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAF 247
Score = 119 (46.9 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 994 IDEEANKLLNEDEIQQKAINNVEQ--NGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 1050
+ E+ ++ + + QK +VE+ GII++DEIDKI ++ + T D+S GVQ+ L
Sbjct: 150 VGEDVENIIQK--LLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQAL 207
Query: 1051 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
L L+EGT + +Y + T +ILFI GAF
Sbjct: 208 LKLIEGTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAF 247
Score = 117 (46.2 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR PI L+ L RI+T L KQY L EG++I+F +D ++ +A
Sbjct: 296 LIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIA 355
Query: 1147 EIAYCINERT 1156
+ A I ++T
Sbjct: 356 KRA--IQQKT 363
Score = 41 (19.5 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 381 KKTRKIKIREAIKLLIDEEANKLLNEDEIQQK 412
K+ RK+ E +++ E+A K + + IQQK
Sbjct: 331 KQYRKLFEFEGVEIDFREDALKAIAKRAIQQK 362
Score = 41 (19.5 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 979 KKTRKIKIREAIKLLIDEEANKLLNEDEIQQK 1010
K+ RK+ E +++ E+A K + + IQQK
Sbjct: 331 KQYRKLFEFEGVEIDFREDALKAIAKRAIQQK 362
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 142 (55.0 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 493 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 552
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDL--- 600
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 553 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 607
Query: 601 SINEDLSRYDSGMEK 615
S YDSG+E+
Sbjct: 608 SKESSEEEYDSGVEE 622
Score = 138 (53.6 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 284 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 341
Score = 138 (53.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 284 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 341
Score = 126 (49.4 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 36/87 (41%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 339 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 398
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T ++LF+ASGAF+
Sbjct: 399 KNSRKLRGETVQVDTTNVLFVASGAFN 425
Score = 126 (49.4 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 36/87 (41%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 339 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 398
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T ++LF+ASGAF+
Sbjct: 399 KNSRKLRGETVQVDTTNVLFVASGAFN 425
Score = 96 (38.9 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 493 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 552
Query: 1147 EIA 1149
+A
Sbjct: 553 RLA 555
Score = 81 (33.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 172 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTSLTPR---ELE 228
Query: 234 IARR 237
I RR
Sbjct: 229 IRRR 232
Score = 81 (33.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 172 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTSLTPR---ELE 228
Query: 832 IARR 835
I RR
Sbjct: 229 IRRR 232
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 141 (54.7 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 606
Query: 603 NEDLSR--YDSGMEK 615
+++ S YDSG+E+
Sbjct: 607 SKESSEEDYDSGVEE 621
Score = 138 (53.6 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 138 (53.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 127 (49.8 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 127 (49.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 96 (38.9 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 1147 EIA 1149
+A
Sbjct: 552 RLA 554
Score = 80 (33.2 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 234 IARR 237
I RR
Sbjct: 228 IRRR 231
Score = 80 (33.2 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 832 IARR 835
I RR
Sbjct: 228 IRRR 231
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 141 (54.7 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 606
Query: 603 NEDLSR--YDSGMEK 615
+++ S YDSG+E+
Sbjct: 607 SKESSEEDYDSGVEE 621
Score = 138 (53.6 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 138 (53.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 127 (49.8 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 127 (49.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 96 (38.9 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 1147 EIA 1149
+A
Sbjct: 552 RLA 554
Score = 80 (33.2 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 234 IARR 237
I RR
Sbjct: 228 IRRR 231
Score = 80 (33.2 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 832 IARR 835
I RR
Sbjct: 228 IRRR 231
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 140 (54.3 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 466 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 525
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 526 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 580
Query: 603 NEDLSR--YDSGMEK 615
++ S YDSG+E+
Sbjct: 581 TKESSEEEYDSGVEE 595
Score = 138 (53.6 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 257 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 314
Score = 138 (53.6 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 257 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 314
Score = 127 (49.8 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 312 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 371
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 372 KNSRKLRGETVQVDTTNILFVASGAFN 398
Score = 127 (49.8 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 312 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 371
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 372 KNSRKLRGETVQVDTTNILFVASGAFN 398
Score = 96 (38.9 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 466 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 525
Query: 1147 EIA 1149
+A
Sbjct: 526 RLA 528
Score = 80 (33.2 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 145 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 201
Query: 234 IARR 237
I RR
Sbjct: 202 IRRR 205
Score = 80 (33.2 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 145 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 201
Query: 832 IARR 835
I RR
Sbjct: 202 IRRR 205
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 140 (54.3 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 478 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 537
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 538 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 592
Query: 603 NEDLSR--YDSGMEK 615
++ S YDSG+E+
Sbjct: 593 TKESSEEEYDSGVEE 607
Score = 138 (53.6 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 269 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 326
Score = 138 (53.6 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 269 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 326
Score = 127 (49.8 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 324 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 383
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 384 KNSRKLRGETVQVDTTNILFVASGAFN 410
Score = 127 (49.8 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 324 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 383
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 384 KNSRKLRGETVQVDTTNILFVASGAFN 410
Score = 96 (38.9 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 478 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 537
Query: 1147 EIA 1149
+A
Sbjct: 538 RLA 540
Score = 80 (33.2 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQE--------ITPKNILMI 224
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ +TP+ +L I
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELLQI 229
Score = 80 (33.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQE--------ITPKNILMI 822
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ +TP+ +L I
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELLQI 229
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 229 (85.7 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 58/149 (38%), Positives = 87/149 (58%)
Query: 161 ELMPDEIIKKSLVI--AEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EIT 217
EL DE ++ V EI LD+YVIGQ+ AK+A+A+A+ N ++R + E+
Sbjct: 49 ELAKDEEVEFKDVPKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRINSNSKIDDVELA 108
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DI 274
NI +IGPTG GKT +A+ LA++ N PF +AT TE GYVG DV+ I+ LI D
Sbjct: 109 KSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADY 168
Query: 275 SIKQTREF-----EINKVRTRAEDAAEDR 298
+++ + EI+KV ++E+ + R
Sbjct: 169 DVEKAEKGIIYIDEIDKVARKSENPSITR 197
Score = 229 (85.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 58/149 (38%), Positives = 87/149 (58%)
Query: 759 ELMPDEIIKKSLVI--AEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EIT 815
EL DE ++ V EI LD+YVIGQ+ AK+A+A+A+ N ++R + E+
Sbjct: 49 ELAKDEEVEFKDVPKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRINSNSKIDDVELA 108
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DI 872
NI +IGPTG GKT +A+ LA++ N PF +AT TE GYVG DV+ I+ LI D
Sbjct: 109 KSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADY 168
Query: 873 SIKQTREF-----EINKVRTRAEDAAEDR 896
+++ + EI+KV ++E+ + R
Sbjct: 169 DVEKAEKGIIYIDEIDKVARKSENPSITR 197
Score = 116 (45.9 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L+ L I+T L KQ++ LL + +++EF ++G L
Sbjct: 294 LIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEF-EEGA--LI 350
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF 579
EIA ER GAR L + +E L+ EV F
Sbjct: 351 EIAKKAIER--KTGARGLRSIIEGLMLEVMF 379
Score = 113 (44.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 396 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 452
+ E+ +L + + Q A +VE + GII++DEIDK+ +S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILLK--LIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQAL 208
Query: 453 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAFHLAKP 486
L ++EGT + ++ I T +ILFI GAF +P
Sbjct: 209 LKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEP 253
Score = 113 (44.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 994 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 1050
+ E+ +L + + Q A +VE + GII++DEIDK+ +S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILLK--LIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQAL 208
Query: 1051 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAFHLAKP 1084
L ++EGT + ++ I T +ILFI GAF +P
Sbjct: 209 LKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEP 253
Score = 92 (37.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L+ L I+T L KQ++ LL + +++EF + + +A
Sbjct: 294 LIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIA 353
Query: 1147 EIA 1149
+ A
Sbjct: 354 KKA 356
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 140 (54.3 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 606
Query: 603 NEDLSR--YDSGMEK 615
++ S YDSG+E+
Sbjct: 607 TKESSEEEYDSGVEE 621
Score = 138 (53.6 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 138 (53.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 127 (49.8 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 127 (49.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 96 (38.9 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 1147 EIA 1149
+A
Sbjct: 552 RLA 554
Score = 80 (33.2 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 234 IARR 237
I RR
Sbjct: 228 IRRR 231
Score = 80 (33.2 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 832 IARR 835
I RR
Sbjct: 228 IRRR 231
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 140 (54.3 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI- 602
+A + +T GAR L + MEKLL E F NS+ + + VD + V + G +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAP 606
Query: 603 NEDLSR--YDSGMEK 615
++ S YDSG+E+
Sbjct: 607 TKESSEEEYDSGVEE 621
Score = 138 (53.6 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 138 (53.6 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 283 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
Score = 127 (49.8 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 127 (49.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 96 (38.9 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 1147 EIA 1149
+A
Sbjct: 552 RLA 554
Score = 80 (33.2 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 234 IARR 237
I RR
Sbjct: 228 IRRR 231
Score = 80 (33.2 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ+ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 227
Query: 832 IARR 835
I RR
Sbjct: 228 IRRR 231
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 218 (81.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 48/132 (36%), Positives = 78/132 (59%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EITPKNILMIGPTGVGKTEI 234
EI LD YVIGQ AK+ +A+A+ N ++R E+ NIL++GPTG GKT +
Sbjct: 68 EICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHASKNNDVELAKSNILLVGPTGTGKTLL 127
Query: 235 ARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EINK 286
A+ LA++ + PF +AT TE GYVG DV+ I+ L+ D ++++ + EI+K
Sbjct: 128 AQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDK 187
Query: 287 VRTRAEDAAEDR 298
+ ++++ + R
Sbjct: 188 ISRKSDNPSITR 199
Score = 218 (81.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 48/132 (36%), Positives = 78/132 (59%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EITPKNILMIGPTGVGKTEI 832
EI LD YVIGQ AK+ +A+A+ N ++R E+ NIL++GPTG GKT +
Sbjct: 68 EICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHASKNNDVELAKSNILLVGPTGTGKTLL 127
Query: 833 ARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EINK 884
A+ LA++ + PF +AT TE GYVG DV+ I+ L+ D ++++ + EI+K
Sbjct: 128 AQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDK 187
Query: 885 VRTRAEDAAEDR 896
+ ++++ + R
Sbjct: 188 ISRKSDNPSITR 199
Score = 125 (49.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 38/118 (32%), Positives = 57/118 (48%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L+ L + +I+T KQY+ L E I + F +D + ++A
Sbjct: 297 LIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVA 356
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS----LLVDADYVNSRLGDLSI 602
+ A I +T GAR L + ME +L E F ++V+A+ V R L I
Sbjct: 357 KKA--IARKT---GARGLRSIMEGILLETMFELPTYEGVEEVVVNAEVVEGRAQPLLI 409
Score = 120 (47.3 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 51/165 (30%), Positives = 84/165 (50%)
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
KRL + +N ++EL + ++ ++ P G + T +T+ +I + E
Sbjct: 96 KRLNHASKNN---DVELAKS--NILLVGPTGTGK-TLLAQTLARIIDVPFTMADATTLTE 149
Query: 391 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 447
A + D E N +L ++ Q A NVE Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 150 AGYVGEDVE-NIVL---KLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 205
Query: 448 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
VQ+ LL ++EGT + ++ + T +ILFI GAF
Sbjct: 206 VQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAF 250
Score = 120 (47.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 51/165 (30%), Positives = 84/165 (50%)
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
KRL + +N ++EL + ++ ++ P G + T +T+ +I + E
Sbjct: 96 KRLNHASKNN---DVELAKS--NILLVGPTGTGK-TLLAQTLARIIDVPFTMADATTLTE 149
Query: 989 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 1045
A + D E N +L ++ Q A NVE Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 150 AGYVGEDVE-NIVL---KLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 205
Query: 1046 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
VQ+ LL ++EGT + ++ + T +ILFI GAF
Sbjct: 206 VQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAF 250
Score = 101 (40.6 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L+ L + +I+T KQY+ L E I + F +D + ++A
Sbjct: 297 LIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVA 356
Query: 1147 EIA 1149
+ A
Sbjct: 357 KKA 359
Score = 54 (24.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 779 LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIG--PTGVGKTEIARRL 836
L+K + + AK ++ + ++ TG + + + P ++ G P +G+ + L
Sbjct: 253 LEKIISARGAAK-SIGFGAKVTDPEERRTGEILRNVEPDDLQRFGLIPEFIGRLPVVATL 311
Query: 837 AKLSNAPFIKI 847
L A +KI
Sbjct: 312 EDLDEAALVKI 322
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 220 (82.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 52/133 (39%), Positives = 81/133 (60%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 233
EI + LD YVIGQ +AK+ +A+A+ N ++R + G E+ NIL+IGPTG GKT
Sbjct: 69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLR-NGDTSNGVELGKSNILLIGPTGSGKTL 127
Query: 234 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EIN 285
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D +++ + EI+
Sbjct: 128 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEID 187
Query: 286 KVRTRAEDAAEDR 298
K+ ++++ + R
Sbjct: 188 KISRKSDNPSITR 200
Score = 220 (82.5 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 52/133 (39%), Positives = 81/133 (60%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 831
EI + LD YVIGQ +AK+ +A+A+ N ++R + G E+ NIL+IGPTG GKT
Sbjct: 69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLR-NGDTSNGVELGKSNILLIGPTGSGKTL 127
Query: 832 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EIN 883
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D +++ + EI+
Sbjct: 128 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEID 187
Query: 884 KVRTRAEDAAEDR 896
K+ ++++ + R
Sbjct: 188 KISRKSDNPSITR 200
Score = 123 (48.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L+ LS +I+ LTKQY+AL EG+ +EF D+ + +A
Sbjct: 300 LIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIA 359
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFN 580
+ A +T GAR L + +E L + ++
Sbjct: 360 KKAMA--RKT---GARGLRSIVEAALLDTMYD 386
Score = 120 (47.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 48/165 (29%), Positives = 80/165 (48%)
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
KRLR G N +EL + ++ ++ P G + T +T+ ++ + E
Sbjct: 97 KRLRNGDTSNG---VELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFTMADATTLTE 150
Query: 391 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 447
A + E+ ++ + + QK +V+ Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 151 AG--YVGEDVENIIQK--LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 206
Query: 448 VQRDLLPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 481
VQ+ LL L+EGT ++ + T ILFI GAF
Sbjct: 207 VQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 251
Score = 120 (47.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 48/165 (29%), Positives = 80/165 (48%)
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
KRLR G N +EL + ++ ++ P G + T +T+ ++ + E
Sbjct: 97 KRLRNGDTSNG---VELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFTMADATTLTE 150
Query: 989 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 1045
A + E+ ++ + + QK +V+ Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 151 AG--YVGEDVENIIQK--LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 206
Query: 1046 VQRDLLPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 1079
VQ+ LL L+EGT ++ + T ILFI GAF
Sbjct: 207 VQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 251
Score = 116 (45.9 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L+ LS +I+ LTKQY+AL EG+ +EF D+ + +A
Sbjct: 300 LIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIA 359
Query: 1147 EIA 1149
+ A
Sbjct: 360 KKA 362
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHR-KKTRKIKIREAIKLL 395
L N I E+ + PH E + P E+ + VIG + KK + + K L
Sbjct: 43 LCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDY--VIGQEQAKKVLAVAVYNHYKRL 99
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 228 (85.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 58/153 (37%), Positives = 93/153 (60%)
Query: 157 QENTELMPDEIIKKSLVIA-EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 214
+E +E+ P E K++L EI LD+YVIGQ+ AK+ +A+A+ N ++R + G
Sbjct: 51 EEISEISPKES-KEALPSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKRLR-NGDNHNG 108
Query: 215 -EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI- 272
E+ NIL+IGPTG GKT +A+ LA+L + PF +AT TE GYVG DV+ II+ L+
Sbjct: 109 IELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 273 --DISIKQTREF-----EINKVRTRAEDAAEDR 298
D +++ + EI+K+ ++++ + R
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Score = 228 (85.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 58/153 (37%), Positives = 93/153 (60%)
Query: 755 QENTELMPDEIIKKSLVIA-EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ- 812
+E +E+ P E K++L EI LD+YVIGQ+ AK+ +A+A+ N ++R + G
Sbjct: 51 EEISEISPKES-KEALPSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKRLR-NGDNHNG 108
Query: 813 -EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI- 870
E+ NIL+IGPTG GKT +A+ LA+L + PF +AT TE GYVG DV+ II+ L+
Sbjct: 109 IELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 871 --DISIKQTREF-----EINKVRTRAEDAAEDR 896
D +++ + EI+K+ ++++ + R
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITR 201
Score = 128 (50.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 280 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALD 339
RE EI+++ + A I+I S ++ + D ++ + KRLR G D
Sbjct: 50 RE-EISEISPKESKEALPSPIEIR-ESLDEYVIGQDHAKKVLAVAVYNHY-KRLRNG--D 104
Query: 340 NKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 399
N IEL + ++ ++ P G + T +T+ ++ + EA + E+
Sbjct: 105 NHN-GIELGKS--NILLIGPTGSGK-TLLAQTLARLLDVPFTMADATTLTEAG--YVGED 158
Query: 400 ANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLV 456
++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL L+
Sbjct: 159 VENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLI 216
Query: 457 EGTTVNT-----------KYGIIKTDHILFIASGAF 481
EGT + ++ + T ILFI GAF
Sbjct: 217 EGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 128 (50.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 878 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALD 937
RE EI+++ + A I+I S ++ + D ++ + KRLR G D
Sbjct: 50 RE-EISEISPKESKEALPSPIEIR-ESLDEYVIGQDHAKKVLAVAVYNHY-KRLRNG--D 104
Query: 938 NKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 997
N IEL + ++ ++ P G + T +T+ ++ + EA + E+
Sbjct: 105 NHN-GIELGKS--NILLIGPTGSGK-TLLAQTLARLLDVPFTMADATTLTEAG--YVGED 158
Query: 998 ANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLV 1054
++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL L+
Sbjct: 159 VENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLI 216
Query: 1055 EGTTVNT-----------KYGIIKTDHILFIASGAF 1079
EGT + ++ + T ILFI GAF
Sbjct: 217 EGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 114 (45.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L L + +I+ LTKQ+ AL E +++EF D + +A
Sbjct: 301 LIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTALFDMENVELEFRSDALHAIA 360
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRLGDLSINED 605
A ++ +T GAR L + +E +L + + + N+S +V + N+ G+ ++
Sbjct: 361 RKA--MDRKT---GARGLRSIVEAVLLDTMYELPSMENVSKIVVDE--NTIKGE---SKP 410
Query: 606 LSRYDSGMEK 615
+ YDS E+
Sbjct: 411 IVIYDSKQEQ 420
Score = 97 (39.2 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L L + +I+ LTKQ+ AL E +++EF D + +A
Sbjct: 301 LIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTALFDMENVELEFRSDALHAIA 360
Query: 1147 EIA 1149
A
Sbjct: 361 RKA 363
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 215 (80.7 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 233
+I LD YVIGQ AK+ +A+A+ N ++R + + E+ NIL+IGPTG GKT
Sbjct: 70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTL 129
Query: 234 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EIN 285
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D + K R EI+
Sbjct: 130 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEID 189
Query: 286 KVRTRAEDAAEDR 298
K+ ++E+ + R
Sbjct: 190 KISRKSENPSITR 202
Score = 215 (80.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 831
+I LD YVIGQ AK+ +A+A+ N ++R + + E+ NIL+IGPTG GKT
Sbjct: 70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTL 129
Query: 832 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EIN 883
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D + K R EI+
Sbjct: 130 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEID 189
Query: 884 KVRTRAEDAAEDR 896
K+ ++E+ + R
Sbjct: 190 KISRKSENPSITR 202
Score = 126 (49.4 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNIS-LLVDADYVNSRLGDLSI 602
A + +T GAR L + +E +L E + + +S +++D +N L I
Sbjct: 362 --AKAMKRKT---GARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLI 414
Score = 120 (47.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 267 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 323
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 324 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 381
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 382 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 439
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 440 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 120 (47.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 865 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 921
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 922 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 979
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 1037
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 1038 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 104 (41.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Score = 43 (20.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 813 EITPKNILMIG--PTGVGKTEIARRLAKLSNAPFIKI 847
++ P++++ G P +G+ + L +L A I+I
Sbjct: 291 QVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQI 327
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 215 (80.7 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 233
+I LD YVIGQ AK+ +A+A+ N ++R + + E+ NIL+IGPTG GKT
Sbjct: 70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTL 129
Query: 234 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EIN 285
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D + K R EI+
Sbjct: 130 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEID 189
Query: 286 KVRTRAEDAAEDR 298
K+ ++E+ + R
Sbjct: 190 KISRKSENPSITR 202
Score = 215 (80.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ--EITPKNILMIGPTGVGKTE 831
+I LD YVIGQ AK+ +A+A+ N ++R + + E+ NIL+IGPTG GKT
Sbjct: 70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTL 129
Query: 832 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EIN 883
+A LA+L + PF +AT TE GYVG DV+ II+ L+ D + K R EI+
Sbjct: 130 LAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEID 189
Query: 884 KVRTRAEDAAEDR 896
K+ ++E+ + R
Sbjct: 190 KISRKSENPSITR 202
Score = 126 (49.4 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNIS-LLVDADYVNSRLGDLSI 602
A + +T GAR L + +E +L E + + +S +++D +N L I
Sbjct: 362 --AKAMKRKT---GARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLI 414
Score = 120 (47.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 267 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 323
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 324 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 381
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 382 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 439
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 440 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 120 (47.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 865 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 921
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 922 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 979
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 1037
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 1038 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 104 (41.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Score = 43 (20.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 813 EITPKNILMIG--PTGVGKTEIARRLAKLSNAPFIKI 847
++ P++++ G P +G+ + L +L A I+I
Sbjct: 291 QVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQI 327
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 234 (87.4 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 55/144 (38%), Positives = 88/144 (61%)
Query: 164 PDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG-PLQQEITPKNIL 222
PD +KK EI LD+YVIGQ++AK+ +A+A+ N ++R + G P E+ NIL
Sbjct: 58 PD--VKKLPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRIESMGKPSDVEMQKSNIL 115
Query: 223 MIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQT 279
++GPTG GKT +A+ LA++ PF +AT TE GYVG DV+ II +L+ D +++
Sbjct: 116 LLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQAADYDVERA 175
Query: 280 REF-----EINKVRTRAEDAAEDR 298
++ EI+K+ +++ + R
Sbjct: 176 QKGIIYIDEIDKIARKSDSPSITR 199
Score = 234 (87.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 55/144 (38%), Positives = 88/144 (61%)
Query: 762 PDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG-PLQQEITPKNIL 820
PD +KK EI LD+YVIGQ++AK+ +A+A+ N ++R + G P E+ NIL
Sbjct: 58 PD--VKKLPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRIESMGKPSDVEMQKSNIL 115
Query: 821 MIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQT 877
++GPTG GKT +A+ LA++ PF +AT TE GYVG DV+ II +L+ D +++
Sbjct: 116 LLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQAADYDVERA 175
Query: 878 REF-----EINKVRTRAEDAAEDR 896
++ EI+K+ +++ + R
Sbjct: 176 QKGIIYIDEIDKIARKSDSPSITR 199
Score = 123 (48.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 41/99 (41%), Positives = 57/99 (57%)
Query: 397 DEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLL 453
++ N +LN + Q A +VE Q GII++DEIDKI +S + T D+S GVQ+ LL
Sbjct: 155 EDVENIILN---LLQAADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALL 211
Query: 454 PLVEGT--TVNTKYG-------IIKTD--HILFIASGAF 481
++EGT +V K G +K D +ILFI GAF
Sbjct: 212 KIIEGTVASVPPKGGRKHPQQEFLKVDTTNILFICGGAF 250
Score = 123 (48.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 41/99 (41%), Positives = 57/99 (57%)
Query: 995 DEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLL 1051
++ N +LN + Q A +VE Q GII++DEIDKI +S + T D+S GVQ+ LL
Sbjct: 155 EDVENIILN---LLQAADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALL 211
Query: 1052 PLVEGT--TVNTKYG-------IIKTD--HILFIASGAF 1079
++EGT +V K G +K D +ILFI GAF
Sbjct: 212 KIIEGTVASVPPKGGRKHPQQEFLKVDTTNILFICGGAF 250
Score = 101 (40.6 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 490 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 549
IPE GR P+ L L + +I+ L KQY+ L E +K++F D + ++
Sbjct: 298 IPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKLFEMEHVKLKFTDGSLVAISR 357
Query: 550 IAYCINERTENIGARR-LYTAMEKLLEEVSFNSNNISLLVDADYVNSRLGDLSINEDLS 607
A + +T G R L AM ++ E+ + ++++ D + ++ + + E+++
Sbjct: 358 EA--LKRKTGARGLRSILENAMLDIMYEIPSQTMVKEVVINEDVIYNKEKPIIVYENVA 414
Score = 86 (35.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 1088 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 1147
IPE GR P+ L L + +I+ L KQY+ L E +K++F D + ++
Sbjct: 298 IPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKLFEMEHVKLKFTDGSLVAISR 357
Query: 1148 IA 1149
A
Sbjct: 358 EA 359
Score = 55 (24.4 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 808 GPLQQEITPKNILMIG--PTGVGKTEIARRLAKLSNAPFIKI 847
G L E+TP+++L G P +G+ + L +L ++I
Sbjct: 281 GELLTEVTPEDLLKFGFIPEFIGRLPVLATLRELDETAMVQI 322
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 216 (81.1 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 43/98 (43%), Positives = 64/98 (65%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EITPKNILMIGPTGVGKTEI 234
EI LD+YVIGQ +K+ +++A+ N ++R + + EI+ N+L+IGPTG GKT +
Sbjct: 63 EIKKVLDEYVIGQEHSKKVLSVAVYNHYKRLSNLSVISEVEISKSNVLLIGPTGSGKTLL 122
Query: 235 ARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
AR LA++ PF +AT TE GYVG DV+ I+ L+
Sbjct: 123 ARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLL 160
Score = 216 (81.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 43/98 (43%), Positives = 64/98 (65%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQ-EITPKNILMIGPTGVGKTEI 832
EI LD+YVIGQ +K+ +++A+ N ++R + + EI+ N+L+IGPTG GKT +
Sbjct: 63 EIKKVLDEYVIGQEHSKKVLSVAVYNHYKRLSNLSVISEVEISKSNVLLIGPTGSGKTLL 122
Query: 833 ARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
AR LA++ PF +AT TE GYVG DV+ I+ L+
Sbjct: 123 ARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLL 160
Score = 125 (49.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 50/158 (31%), Positives = 80/158 (50%)
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 397
L N + E+ + ++ ++ P G + T +T+ V+ + EA + D
Sbjct: 93 LSNLSVISEVEISKSNVLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTEAGYVGED 151
Query: 398 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 454
E N LL ++ Q A NV+ Q GII++DE+DKI+ +S + T D+S GVQ+ LL
Sbjct: 152 VE-NILL---KLLQAANFNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLK 207
Query: 455 LVEGTTVNT-----------KYGIIKTDHILFIASGAF 481
++EGT + ++ I TD+ILFI GAF
Sbjct: 208 VIEGTVSSVPPQGGRKHPHQEFIQINTDNILFIFGGAF 245
Score = 125 (49.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 50/158 (31%), Positives = 80/158 (50%)
Query: 936 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 995
L N + E+ + ++ ++ P G + T +T+ V+ + EA + D
Sbjct: 93 LSNLSVISEVEISKSNVLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTEAGYVGED 151
Query: 996 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 1052
E N LL ++ Q A NV+ Q GII++DE+DKI+ +S + T D+S GVQ+ LL
Sbjct: 152 VE-NILL---KLLQAANFNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLK 207
Query: 1053 LVEGTTVNT-----------KYGIIKTDHILFIASGAF 1079
++EGT + ++ I TD+ILFI GAF
Sbjct: 208 VIEGTVSSVPPQGGRKHPHQEFIQINTDNILFIFGGAF 245
Score = 115 (45.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 31/93 (33%), Positives = 43/93 (46%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR P+ L L S RI+ L KQY+ L + I ++F D + +A
Sbjct: 290 LIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFEMDNINLQFDDSALSVIA 349
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFNS 581
+ A GAR L +E LL ++ F S
Sbjct: 350 KKA-----AVRKTGARGLRAILEALLLDLMFES 377
Score = 97 (39.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR P+ L L S RI+ L KQY+ L + I ++F D + +A
Sbjct: 290 LIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFEMDNINLQFDDSALSVIA 349
Query: 1147 EIA 1149
+ A
Sbjct: 350 KKA 352
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 209 (78.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 45/112 (40%), Positives = 71/112 (63%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG--------PLQQ----EITPKNILM 223
EI LDK+VIGQ+RAK+ +++A+ N ++R T P+ E+ N+L+
Sbjct: 254 EICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKSNVLL 313
Query: 224 IGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 275
+GPTG GKT +A+ LA+L N PF+ +AT T+ GYVG DV++I+ L+ ++
Sbjct: 314 MGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVA 365
Score = 209 (78.6 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 45/112 (40%), Positives = 71/112 (63%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG--------PLQQ----EITPKNILM 821
EI LDK+VIGQ+RAK+ +++A+ N ++R T P+ E+ N+L+
Sbjct: 254 EICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKSNVLL 313
Query: 822 IGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 873
+GPTG GKT +A+ LA+L N PF+ +AT T+ GYVG DV++I+ L+ ++
Sbjct: 314 MGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVA 365
Score = 130 (50.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GRFPI V L +L+ R++ L KQY+ L + +K+ F + ++ ++
Sbjct: 501 LIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIIS 560
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF 579
+ A +N GAR L +E +L E F
Sbjct: 561 KQAM-----VKNTGARGLRALLESILTEAMF 586
Score = 130 (50.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 54/174 (31%), Positives = 90/174 (51%)
Query: 326 RQIFRKRLREGA----LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 381
++I+ +++G+ +D+ + +EL+ + ++ +M P G + T KT+ ++
Sbjct: 282 KRIYHTSMKKGSAAQPIDDDD-NVELDKS--NVLLMGPTGSGK-TLLAKTLARLVNVPFV 337
Query: 382 KTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRS-SQN 438
+ +A + D E+ +KLL E +A Q GI+++DE+DKIT ++ S N
Sbjct: 338 IADATTLTQAGYVGDDVESILHKLLTVAEFNVQAA----QQGIVYIDEVDKITKKAESLN 393
Query: 439 NNTDISRAGVQRDLLPLVEGTTVNTK-YGIIKT---DHI-------LFIASGAF 481
+ D+S GVQ+ LL L+EGT VN G K DHI LFI GAF
Sbjct: 394 ISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAF 447
Score = 130 (50.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 54/174 (31%), Positives = 90/174 (51%)
Query: 924 RQIFRKRLREGA----LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 979
++I+ +++G+ +D+ + +EL+ + ++ +M P G + T KT+ ++
Sbjct: 282 KRIYHTSMKKGSAAQPIDDDD-NVELDKS--NVLLMGPTGSGK-TLLAKTLARLVNVPFV 337
Query: 980 KTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRS-SQN 1036
+ +A + D E+ +KLL E +A Q GI+++DE+DKIT ++ S N
Sbjct: 338 IADATTLTQAGYVGDDVESILHKLLTVAEFNVQAA----QQGIVYIDEVDKITKKAESLN 393
Query: 1037 NNTDISRAGVQRDLLPLVEGTTVNTK-YGIIKT---DHI-------LFIASGAF 1079
+ D+S GVQ+ LL L+EGT VN G K DHI LFI GAF
Sbjct: 394 ISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAF 447
Score = 107 (42.7 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GRFPI V L +L+ R++ L KQY+ L + +K+ F + ++ ++
Sbjct: 501 LIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIIS 560
Query: 1147 EIAYCIN 1153
+ A N
Sbjct: 561 KQAMVKN 567
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 155 (59.6 bits), Expect = 5.6e-19, Sum P(3) = 5.6e-19
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI 274
E+ NIL++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG DV++I+ L+ +
Sbjct: 220 ELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 279
Query: 275 S 275
+
Sbjct: 280 A 280
Score = 155 (59.6 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI 872
E+ NIL++GPTG GKT +A+ LA+ N PF+ +AT T+ GYVG DV++I+ L+ +
Sbjct: 220 ELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTV 279
Query: 873 S 873
+
Sbjct: 280 A 280
Score = 131 (51.2 bits), Expect = 5.6e-19, Sum P(3) = 5.6e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 476 IASGAFHLAKPSDLI-----PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALL 530
+AS + SDLI PE GRFP+ V L +L+ + +++T L KQY+ +
Sbjct: 398 VASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMY 457
Query: 531 ATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNISLLVDA 590
+K+ F + ++ +A A T+N GAR L +E +L + + + +
Sbjct: 458 QMNSVKLHFTESALRLIARKAI-----TKNTGARGLRALLESILMDSMYEIPDEG--TGS 510
Query: 591 DYVNSRLGDLSINEDLSRYDSGMEKFQGTTILS 623
D + + + D E R SG + +G L+
Sbjct: 511 DMIEAVVVDEEAVEGEGRRGSGAKILRGKGALA 543
Score = 123 (48.4 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 419 QNGIIFLDEIDKITTRS-SQNNNTDISRAGVQRDLLPLVEGTTVNT-KYGI--------- 467
Q GI+++DE+DKIT ++ S N + D+S GVQ+ LL ++EGT VN + G
Sbjct: 288 QQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNI 347
Query: 468 -IKTDHILFIASGAF-HLAKP-SDLIPELQGRF--PIRVELDSLSISDFTRIMTSTNVCL 522
I T ILFI GAF + K S+ + F P+R + + + T ++N+
Sbjct: 348 QIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGV---TNAAVASNLME 404
Query: 523 TKQYEALLATEGIKIEFV 540
T + L+A G+ EFV
Sbjct: 405 TVESSDLIAY-GLIPEFV 421
Score = 123 (48.4 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 1017 QNGIIFLDEIDKITTRS-SQNNNTDISRAGVQRDLLPLVEGTTVNT-KYGI--------- 1065
Q GI+++DE+DKIT ++ S N + D+S GVQ+ LL ++EGT VN + G
Sbjct: 288 QQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNI 347
Query: 1066 -IKTDHILFIASGAF-HLAKP-SDLIPELQGRF--PIRVELDSLSISDFTRIMTSTNVCL 1120
I T ILFI GAF + K S+ + F P+R + + + T ++N+
Sbjct: 348 QIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGV---TNAAVASNLME 404
Query: 1121 TKQYEALLATEGIKIEFV 1138
T + L+A G+ EFV
Sbjct: 405 TVESSDLIAY-GLIPEFV 421
Score = 108 (43.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 1074 IASGAFHLAKPSDLI-----PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALL 1128
+AS + SDLI PE GRFP+ V L +L+ + +++T L KQY+ +
Sbjct: 398 VASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMY 457
Query: 1129 ATEGIKIEFVDDGIQRLAEIAYCIN 1153
+K+ F + ++ +A A N
Sbjct: 458 QMNSVKLHFTESALRLIARKAITKN 482
Score = 77 (32.2 bits), Expect = 5.6e-19, Sum P(3) = 5.6e-19
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 205
EI L+K+VIGQ RAK+ +++A+ N ++R
Sbjct: 163 EICKGLNKFVIGQERAKKVLSVAVYNHYKR 192
Score = 77 (32.2 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 803
EI L+K+VIGQ RAK+ +++A+ N ++R
Sbjct: 163 EICKGLNKFVIGQERAKKVLSVAVYNHYKR 192
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 183 (69.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWR---RQQITGPLQQEITPKNILMIGPTGVGKT 232
+I D ++ Q AK+ +++A+ N ++ ++ EIT NIL+IGPTG GKT
Sbjct: 62 DIKKYFDSFITAQEDAKKILSVAVYNHYKCFVGNRLNSK-DVEITKSNILIIGPTGCGKT 120
Query: 233 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
A+ LA+ N PF +AT TE GYVG DV+ I+R L+
Sbjct: 121 LFAKTLARFLNVPFAICDATSITEAGYVGDDVENILRMLL 160
Score = 183 (69.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWR---RQQITGPLQQEITPKNILMIGPTGVGKT 830
+I D ++ Q AK+ +++A+ N ++ ++ EIT NIL+IGPTG GKT
Sbjct: 62 DIKKYFDSFITAQEDAKKILSVAVYNHYKCFVGNRLNSK-DVEITKSNILIIGPTGCGKT 120
Query: 831 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
A+ LA+ N PF +AT TE GYVG DV+ I+R L+
Sbjct: 121 LFAKTLARFLNVPFAICDATSITEAGYVGDDVENILRMLL 160
Score = 123 (48.4 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 397
L++K++EI T ++ I+ P G + T KT+ + I EA +
Sbjct: 97 LNSKDVEI----TKSNILIIGPTGCGK-TLFAKTLARFLNVPFAICDATSITEAG--YVG 149
Query: 398 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 454
++ +L + Q A NVE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL
Sbjct: 150 DDVENILRM--LLQSADYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLK 207
Query: 455 LVEGTTV-----------NTKYGIIKTDHILFIASGAF 481
++EGT N + I T +ILFI GAF
Sbjct: 208 IMEGTIASVPPQGGRKHPNQETIQIDTTNILFICGGAF 245
Score = 123 (48.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 936 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 995
L++K++EI T ++ I+ P G + T KT+ + I EA +
Sbjct: 97 LNSKDVEI----TKSNILIIGPTGCGK-TLFAKTLARFLNVPFAICDATSITEAG--YVG 149
Query: 996 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 1052
++ +L + Q A NVE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL
Sbjct: 150 DDVENILRM--LLQSADYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLK 207
Query: 1053 LVEGTTV-----------NTKYGIIKTDHILFIASGAF 1079
++EGT N + I T +ILFI GAF
Sbjct: 208 IMEGTIASVPPQGGRKHPNQETIQIDTTNILFICGGAF 245
Score = 121 (47.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
+IPE GR P+ LD L+ + I++ L KQY L + I++ F D+ ++ +A
Sbjct: 290 MIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMDNIQLSFSDEALKTVA 349
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSF----NSNNISLLVDADYVNSRLGD 599
A I + +GAR L ME +L F N + +L++ D V + + +
Sbjct: 350 RAA--IKRK---VGARGLRAIMESVLRNYMFELPSNKDVKTLIITEDIVRAEMAN 399
Score = 96 (38.9 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
+IPE GR P+ LD L+ + I++ L KQY L + I++ F D+ ++ +A
Sbjct: 290 MIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMDNIQLSFSDEALKTVA 349
Query: 1147 EIA 1149
A
Sbjct: 350 RAA 352
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 143 (55.4 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 271
E+ N+L++GPTG GKT +A+ LA++ N PF +AT T+ YVG DV++I+ L
Sbjct: 259 ELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Score = 143 (55.4 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 869
E+ N+L++GPTG GKT +A+ LA++ N PF +AT T+ YVG DV++I+ L
Sbjct: 259 ELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Score = 136 (52.9 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 67/241 (27%), Positives = 117/241 (48%)
Query: 326 RQIFRKRLREG-ALDNKEIEIELNDTGPHMEI-------MSPPGMEEMTAQIKTMFSVIG 377
++I+ ++G A ++ I++E +D H+E+ + P G + T KT+ ++
Sbjct: 230 KRIYHASRKKGSASESYNIDME-DDNIDHVELDKSNVLLLGPTGSGK-TLLAKTLARIVN 287
Query: 378 NHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRS 435
+ +A + E+ +L + + +A NVE Q GI+++DE+DK+T +S
Sbjct: 288 VPFAIADATSLTQAS--YVGEDVESILYK--LYVEAGCNVEEAQRGIVYIDEVDKMTMKS 343
Query: 436 -SQNNNTDISRAGVQRDLLPLVEGTTVNT---KYGI----------IKTDHILFIASGAF 481
S N D+S GVQ+ LL L+EGT V+ + G+ + T ILFI GAF
Sbjct: 344 HSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAF 403
Query: 482 -HLAKP-SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEF 539
L K S+ + F V + +S S + ++++ + Q E L+A G+ EF
Sbjct: 404 IDLEKTVSERQHDASIGFGASVRTN-MSTSGLSSAAVTSSLLESLQSEDLVAY-GLIPEF 461
Query: 540 V 540
V
Sbjct: 462 V 462
Score = 136 (52.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 67/241 (27%), Positives = 117/241 (48%)
Query: 924 RQIFRKRLREG-ALDNKEIEIELNDTGPHMEI-------MSPPGMEEMTAQIKTMFSVIG 975
++I+ ++G A ++ I++E +D H+E+ + P G + T KT+ ++
Sbjct: 230 KRIYHASRKKGSASESYNIDME-DDNIDHVELDKSNVLLLGPTGSGK-TLLAKTLARIVN 287
Query: 976 NHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRS 1033
+ +A + E+ +L + + +A NVE Q GI+++DE+DK+T +S
Sbjct: 288 VPFAIADATSLTQAS--YVGEDVESILYK--LYVEAGCNVEEAQRGIVYIDEVDKMTMKS 343
Query: 1034 -SQNNNTDISRAGVQRDLLPLVEGTTVNT---KYGI----------IKTDHILFIASGAF 1079
S N D+S GVQ+ LL L+EGT V+ + G+ + T ILFI GAF
Sbjct: 344 HSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAF 403
Query: 1080 -HLAKP-SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEF 1137
L K S+ + F V + +S S + ++++ + Q E L+A G+ EF
Sbjct: 404 IDLEKTVSERQHDASIGFGASVRTN-MSTSGLSSAAVTSSLLESLQSEDLVAY-GLIPEF 461
Query: 1138 V 1138
V
Sbjct: 462 V 462
Score = 130 (50.8 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 489 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 548
LIPE GR PI V L +L+ +++T L KQY+ L ++++F + + +A
Sbjct: 457 LIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIA 516
Query: 549 EIAYCINERTENIGARRLYTAMEKLLEEVSFN--------SNNI-SLLVDADYVNSRLGD 599
A ++N GAR L + +E +L E F S +I ++LVD + V S +G
Sbjct: 517 RKAM-----SKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGS-VGS 570
Query: 600 LSINEDLSRYDSGMEKF 616
+ + D+ +++F
Sbjct: 571 PGCGAKILKGDNVLQQF 587
Score = 99 (39.9 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 1087 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 1146
LIPE GR PI V L +L+ +++T L KQY+ L ++++F + + +A
Sbjct: 457 LIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIA 516
Query: 1147 EIAYCIN 1153
A N
Sbjct: 517 RKAMSKN 523
Score = 75 (31.5 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 205
EI LD++VIGQ +AK+ +++A+ N ++R
Sbjct: 202 EICQGLDEFVIGQEKAKKVLSVAVYNHYKR 231
Score = 75 (31.5 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR 803
EI LD++VIGQ +AK+ +++A+ N ++R
Sbjct: 202 EICQGLDEFVIGQEKAKKVLSVAVYNHYKR 231
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 157 (60.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 71/256 (27%), Positives = 115/256 (44%)
Query: 376 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 428
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 372 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 431
Query: 429 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 487
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 432 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 487
Query: 488 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 547
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 488 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 547
Query: 548 AEIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI 602
A +A + +T GAR L + MEKLL E F NS+ + + VD D V + G +
Sbjct: 548 ARLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIRA 602
Query: 603 -NEDLSR--YDSGMEK 615
+D S YDSG+E+
Sbjct: 603 PTKDSSEEEYDSGVEE 618
Score = 138 (53.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 280 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 337
Score = 138 (53.6 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 280 KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 337
Score = 127 (49.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 335 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 394
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 395 KNSRKLRGETVQVDTTNILFVASGAFN 421
Score = 127 (49.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 335 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 394
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 395 KNSRKLRGETVQVDTTNILFVASGAFN 421
Score = 105 (42.0 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 974 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 1026
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 372 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 431
Query: 1027 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 1085
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 432 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 487
Query: 1086 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 1145
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 488 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 547
Query: 1146 AEIA 1149
A +A
Sbjct: 548 ARLA 551
Score = 76 (31.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 233
+I + LDKYV+GQ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 224
Query: 234 IARR 237
I RR
Sbjct: 225 IRRR 228
Score = 76 (31.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQEITPKNILMIGPTGVGKTE 831
+I + LDKYV+GQ AK+ +++A+ N ++R I L+Q+ + + P + E
Sbjct: 168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPR---ELE 224
Query: 832 IARR 835
I RR
Sbjct: 225 IRRR 228
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 140 (54.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 67/250 (26%), Positives = 114/250 (45%)
Query: 374 SVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITT 433
+++ K TRK++ E +++ + N L + A N +++ II + +K
Sbjct: 367 TIVNVPEKNTRKLR-GETVQV---DTTNILF----VASGAFNGLDR--IISRRKNEKYLG 416
Query: 434 RSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPEL 493
+ +N RA DL G V+ I + D +L A L + +IPE
Sbjct: 417 FGTPSNMGKGRRAAAAADLANTTGGE-VDAVAEIEEKDRLLKHVE-ARDLIE-FGMIPEF 473
Query: 494 QGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYC 553
GR P+ V L SL RI+T + QY+AL + + ++ D ++ +A +A
Sbjct: 474 VGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLA-- 531
Query: 554 INERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRLGDLSIN---EDLS 607
+ +T GAR L + MEKLL + F +S+ +S+ V D V + I ++ S
Sbjct: 532 LERKT---GARGLRSIMEKLLLDPMFEVPHSDIVSVDVSKDVVQGKAPPQYIRAAAKESS 588
Query: 608 R--YDSGMEK 615
YDSG+E+
Sbjct: 589 EEEYDSGIEE 598
Score = 135 (52.6 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NI+++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 259 KLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 316
Score = 135 (52.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NI+++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 259 KLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 316
Score = 120 (47.3 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVN-----TKY--GI---I 1066
Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN T+ G +
Sbjct: 327 QQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNTRKLRGETVQV 386
Query: 1067 KTDHILFIASGAFH 1080
T +ILF+ASGAF+
Sbjct: 387 DTTNILFVASGAFN 400
Score = 120 (47.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVN-----TKY--GI---I 468
Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN T+ G +
Sbjct: 327 QQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNTRKLRGETVQV 386
Query: 469 KTDHILFIASGAFH 482
T +ILF+ASGAF+
Sbjct: 387 DTTNILFVASGAFN 400
Score = 100 (40.3 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 972 SVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITT 1031
+++ K TRK++ E +++ + N L + A N +++ II + +K
Sbjct: 367 TIVNVPEKNTRKLR-GETVQV---DTTNILF----VASGAFNGLDR--IISRRKNEKYLG 416
Query: 1032 RSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPEL 1091
+ +N RA DL G V+ I + D +L A L + +IPE
Sbjct: 417 FGTPSNMGKGRRAAAAADLANTTGGE-VDAVAEIEEKDRLLKHVE-ARDLIE-FGMIPEF 473
Query: 1092 QGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIA 1149
GR P+ V L SL RI+T + QY+AL + + ++ D ++ +A +A
Sbjct: 474 VGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLA 531
Score = 85 (35.0 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR-----------QQITGPLQQEITPKNILMI 224
+I + LDKYV+GQ+ AK+ +++A+ N ++R QQ+ Q +TP+ +L I
Sbjct: 160 KIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYNNMPAGSRQQQVEVEKQASLTPRELLQI 219
Score = 85 (35.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR-----------QQITGPLQQEITPKNILMI 822
+I + LDKYV+GQ+ AK+ +++A+ N ++R QQ+ Q +TP+ +L I
Sbjct: 160 KIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYNNMPAGSRQQQVEVEKQASLTPRELLQI 219
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 157 (60.3 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 71/256 (27%), Positives = 115/256 (44%)
Query: 376 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 428
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 359 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 418
Query: 429 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 487
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 419 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 474
Query: 488 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 547
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 475 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 534
Query: 548 AEIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSRL--GDLSI 602
A +A + +T GAR L + MEKLL E F NS+ + + VD D V + G +
Sbjct: 535 ARLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIRA 589
Query: 603 -NEDLSR--YDSGMEK 615
+D S YDSG+E+
Sbjct: 590 PTKDSSEEEYDSGVEE 605
Score = 131 (51.2 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 215 EITPKNILMIGPTG-VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 266 KLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 324
Score = 131 (51.2 bits), Expect = 9.6e-16, Sum P(3) = 9.6e-16
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 813 EITPKNILMIGPTG-VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
++ NIL++GPTG GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 266 KLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 324
Score = 127 (49.8 bits), Expect = 9.6e-16, Sum P(3) = 9.6e-16
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 1006 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 1063
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 322 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 381
Query: 1064 -------GI---IKTDHILFIASGAFH 1080
G + T +ILF+ASGAF+
Sbjct: 382 KNSRKLRGETVQVDTTNILFVASGAFN 408
Score = 127 (49.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 408 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 465
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 322 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 381
Query: 466 -------GI---IKTDHILFIASGAFH 482
G + T +ILF+ASGAF+
Sbjct: 382 KNSRKLRGETVQVDTTNILFVASGAFN 408
Score = 105 (42.0 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 974 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 1026
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 359 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 418
Query: 1027 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 1085
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 419 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 474
Query: 1086 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 1145
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 475 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 534
Query: 1146 AEIA 1149
A +A
Sbjct: 535 ARLA 538
Score = 76 (31.8 bits), Expect = 9.6e-16, Sum P(3) = 9.6e-16
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQE--------ITPKNILMI 224
+I + LDKYV+GQ AK+ +++A+ N ++R I L+Q+ +TP+ +L I
Sbjct: 168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELLQI 226
Score = 76 (31.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRR--QQITGPLQQE--------ITPKNILMI 822
+I + LDKYV+GQ AK+ +++A+ N ++R I L+Q+ +TP+ +L I
Sbjct: 168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELLQI 226
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 141 (54.7 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG-PLQQ--EITPKNILMIGPTGVGKT 232
+I + D+ + N +A RN R+ + G + + E++ N+L++GP+G GKT
Sbjct: 91 KIADDRDEPIFSGNSESKA---GWRNLQRQFNLAGREVDEDLELSKSNVLVVGPSGSGKT 147
Query: 233 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 272
+A LAK+ N P + T+ T+ GY+G DV+ I L+
Sbjct: 148 LLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLL 187
Score = 141 (54.7 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITG-PLQQ--EITPKNILMIGPTGVGKT 830
+I + D+ + N +A RN R+ + G + + E++ N+L++GP+G GKT
Sbjct: 91 KIADDRDEPIFSGNSESKA---GWRNLQRQFNLAGREVDEDLELSKSNVLVVGPSGSGKT 147
Query: 831 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 870
+A LAK+ N P + T+ T+ GY+G DV+ I L+
Sbjct: 148 LLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLL 187
Score = 126 (49.4 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 47/146 (32%), Positives = 73/146 (50%)
Query: 480 AFHLAKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEG 534
A L P+DL IPEL GR PI L L D I+ L QYE + G
Sbjct: 341 ALDLTTPTDLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFG 400
Query: 535 IKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFN--SNNIS-LLVDAD 591
+++ ++++A+ A + E T GAR L ME+LL V+++ +NI+ +L+D
Sbjct: 401 VRLCVTQKALKKVAQFA--LKEGT---GARGLRGIMERLLLNVNYDCPGSNIAYVLIDEA 455
Query: 592 YVNS-RLGDLSINEDLS-RYDSGMEK 615
V+S + + S+ + +Y SG EK
Sbjct: 456 TVDSLQETEHSLASQVDVKYYSGDEK 481
Score = 111 (44.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 52/225 (23%), Positives = 102/225 (45%)
Query: 239 AKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDR 298
++LSN P K KF + VG+++ + ++ +++ IN + + E +
Sbjct: 31 SRLSNIPTPKA-LKKFLDEYIVGQEIG---KKVLSVAV-YNHYLRINDKQKKGELQRQRE 85
Query: 299 VIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS 358
+++ +EK D D ++ +R R+ L +E++ +L + ++ ++
Sbjct: 86 LME-----REKIADDRDEPIFSGNSESKAGWRNLQRQFNLAGREVDEDLELSKSNVLVVG 140
Query: 359 PPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINN 416
P G + T T+ ++ T ++ +A + D E +LL E +
Sbjct: 141 PSGSGK-TLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLLVNAEFD---VAR 196
Query: 417 VEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTV 461
E+ GII LDEIDK+ ++ D+S GVQ+ LL ++EG V
Sbjct: 197 AEK-GIIVLDEIDKLAKPAASIGTKDVSGEGVQQSLLKIIEGHKV 240
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 52/225 (23%), Positives = 102/225 (45%)
Query: 837 AKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDR 896
++LSN P K KF + VG+++ + ++ +++ IN + + E +
Sbjct: 31 SRLSNIPTPKA-LKKFLDEYIVGQEIG---KKVLSVAV-YNHYLRINDKQKKGELQRQRE 85
Query: 897 VIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS 956
+++ +EK D D ++ +R R+ L +E++ +L + ++ ++
Sbjct: 86 LME-----REKIADDRDEPIFSGNSESKAGWRNLQRQFNLAGREVDEDLELSKSNVLVVG 140
Query: 957 PPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINN 1014
P G + T T+ ++ T ++ +A + D E +LL E +
Sbjct: 141 PSGSGK-TLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLLVNAEFD---VAR 196
Query: 1015 VEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTV 1059
E+ GII LDEIDK+ ++ D+S GVQ+ LL ++EG V
Sbjct: 197 AEK-GIIVLDEIDKLAKPAASIGTKDVSGEGVQQSLLKIIEGHKV 240
Score = 87 (35.7 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 1078 AFHLAKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEG 1132
A L P+DL IPEL GR PI L L D I+ L QYE + G
Sbjct: 341 ALDLTTPTDLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFG 400
Query: 1133 IKIEFVDDGIQRLAEIA 1149
+++ ++++A+ A
Sbjct: 401 VRLCVTQKALKKVAQFA 417
Score = 64 (27.6 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 181 LDKYVIGQNRAKRAVAIALRNRWRR---QQITGPLQQE 215
LD+Y++GQ K+ +++A+ N + R +Q G LQ++
Sbjct: 46 LDEYIVGQEIGKKVLSVAVYNHYLRINDKQKKGELQRQ 83
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 441 TDISRAG-VQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 487
T +++AG + D+ +E VN ++ + + + + + LAKP+
Sbjct: 167 TQLTQAGYIGEDVEVCIERLLVNAEFDVARAEKGIIVLDEIDKLAKPA 214
Score = 44 (20.5 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 459 TTVNTKYGIIKTDHILFIASGAF 481
TT + ++ T +ILF+ GAF
Sbjct: 260 TTKKDEVFVVDTSNILFMIMGAF 282
Score = 44 (20.5 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 1057 TTVNTKYGIIKTDHILFIASGAF 1079
TT + ++ T +ILF+ GAF
Sbjct: 260 TTKKDEVFVVDTSNILFMIMGAF 282
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 136 (52.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 70/307 (22%), Positives = 141/307 (45%)
Query: 652 VRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKE-WRNDRTLRRLE 710
V K++ N++L + + ++ L D E N K + +L +++L+ E +R+ +R +
Sbjct: 61 VEKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGK 120
Query: 711 AMLL-TANRETTLI-ITGNGDV--LEPENXXXXXXXXXXXXXXXXKALQENTELMPDEII 766
M++ T+ R+T + + G D L+P + + + M E+I
Sbjct: 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM--EVI 178
Query: 767 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTG 826
+K + LDK + A+ + + ++ + ++I G ++ PK +LM GP G
Sbjct: 179 EKPSEDYSDIGGLDKQI---EDLVEAIVLPMLHKEKFEKI-G-IKP---PKGVLMHGPPG 230
Query: 827 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREF----EI 882
GKT +AR A +NA F+K+ + ++ ++G D ++RD +++ ++ E+
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQM-FIG-DGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 883 NKVRTRAEDA--AEDRVID--ILVPSKEKSNLDTDFXXXXXXISTRQ--IFRKRLREGAL 936
+ + T+ D+ + DR + +L + TD + R + LR G L
Sbjct: 289 DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRL 348
Query: 937 DNKEIEI 943
D K IE+
Sbjct: 349 DRK-IEL 354
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 70/307 (22%), Positives = 141/307 (45%)
Query: 54 VRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKE-WRNDRTLRRLE 112
V K++ N++L + + ++ L D E N K + +L +++L+ E +R+ +R +
Sbjct: 61 VEKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGK 120
Query: 113 AMLL-TANRETTLI-ITGNGDV--LEPENXXXXXXXXXXXXXXXXKALQENTELMPDEII 168
M++ T+ R+T + + G D L+P + + + M E+I
Sbjct: 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM--EVI 178
Query: 169 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTG 228
+K + LDK + A+ + + ++ + ++I G ++ PK +LM GP G
Sbjct: 179 EKPSEDYSDIGGLDKQI---EDLVEAIVLPMLHKEKFEKI-G-IKP---PKGVLMHGPPG 230
Query: 229 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREF----EI 284
GKT +AR A +NA F+K+ + ++ ++G D ++RD +++ ++ E+
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQM-FIG-DGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 285 NKVRTRAEDA--AEDRVID--ILVPSKEKSNLDTDFXXXXXXISTRQ--IFRKRLREGAL 338
+ + T+ D+ + DR + +L + TD + R + LR G L
Sbjct: 289 DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRL 348
Query: 339 DNKEIEI 345
D K IE+
Sbjct: 349 DRK-IEL 354
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 376 IGNHRKKTRKIKIREAIKLLIDEEANKLLNE-DEIQQKAINNVEQ 419
+ N KTR I IK+L +E A +L NE +Q+K +NVE+
Sbjct: 20 LSNSEIKTRVSLIDTEIKILKNEHA-RLKNEYKNLQEKIKDNVEK 63
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 136 (52.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 70/307 (22%), Positives = 141/307 (45%)
Query: 652 VRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKE-WRNDRTLRRLE 710
V K++ N++L + + ++ L D E N K + +L +++L+ E +R+ +R +
Sbjct: 61 VEKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGK 120
Query: 711 AMLL-TANRETTLI-ITGNGDV--LEPENXXXXXXXXXXXXXXXXKALQENTELMPDEII 766
M++ T+ R+T + + G D L+P + + + M E+I
Sbjct: 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM--EVI 178
Query: 767 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTG 826
+K + LDK + A+ + + ++ + ++I G ++ PK +LM GP G
Sbjct: 179 EKPSEDYSDIGGLDKQI---EDLVEAIVLPMLHKEKFEKI-G-IKP---PKGVLMHGPPG 230
Query: 827 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREF----EI 882
GKT +AR A +NA F+K+ + ++ ++G D ++RD +++ ++ E+
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQM-FIG-DGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 883 NKVRTRAEDA--AEDRVID--ILVPSKEKSNLDTDFXXXXXXISTRQ--IFRKRLREGAL 936
+ + T+ D+ + DR + +L + TD + R + LR G L
Sbjct: 289 DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRL 348
Query: 937 DNKEIEI 943
D K IE+
Sbjct: 349 DRK-IEL 354
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 70/307 (22%), Positives = 141/307 (45%)
Query: 54 VRKLYQNQVLAGIAGSTADAFTLLDFFEANLEKHQGNLMRASVELAKE-WRNDRTLRRLE 112
V K++ N++L + + ++ L D E N K + +L +++L+ E +R+ +R +
Sbjct: 61 VEKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGK 120
Query: 113 AMLL-TANRETTLI-ITGNGDV--LEPENXXXXXXXXXXXXXXXXKALQENTELMPDEII 168
M++ T+ R+T + + G D L+P + + + M E+I
Sbjct: 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM--EVI 178
Query: 169 KKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTG 228
+K + LDK + A+ + + ++ + ++I G ++ PK +LM GP G
Sbjct: 179 EKPSEDYSDIGGLDKQI---EDLVEAIVLPMLHKEKFEKI-G-IKP---PKGVLMHGPPG 230
Query: 229 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREF----EI 284
GKT +AR A +NA F+K+ + ++ ++G D ++RD +++ ++ E+
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQM-FIG-DGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 285 NKVRTRAEDA--AEDRVID--ILVPSKEKSNLDTDFXXXXXXISTRQ--IFRKRLREGAL 338
+ + T+ D+ + DR + +L + TD + R + LR G L
Sbjct: 289 DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRL 348
Query: 339 DNKEIEI 345
D K IE+
Sbjct: 349 DRK-IEL 354
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 376 IGNHRKKTRKIKIREAIKLLIDEEANKLLNE-DEIQQKAINNVEQ 419
+ N KTR I IK+L +E A +L NE +Q+K +NVE+
Sbjct: 20 LSNSEIKTRVSLIDTEIKILKNEHA-RLKNEYKNLQEKIKDNVEK 63
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 86 (35.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DEID I + + N ++ R V + LL
Sbjct: 276 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG-EVERRIVSQ-LLT 333
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL---DSLSIS 509
L++G H+ I GA + +P+ + P L+ GRF +++ D +
Sbjct: 334 LMDGLKSRA--------HV--IVMGATN--RPNSIDPALRRFGRFDREIDIGVPDEIGRL 381
Query: 510 DFTRIMTSTNVCLTKQYE 527
+ RI T N+ L + +
Sbjct: 382 EVLRIHTK-NMKLAEDVD 398
Score = 83 (34.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 40/149 (26%), Positives = 64/149 (42%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
K +L GP G GKT +A+ +A A FI ++ + + + G + +R++ D +Q
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF-GES-EANVREIFD-KARQ 571
Query: 877 TRE----F-EINKVRTR----AEDA--AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQ 925
+ F E++ + T+ A DA A DRV++ L+ + N
Sbjct: 572 SAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDI 631
Query: 926 IFRKRLREGALDNKEIEIELNDTGPHMEI 954
I LR G LD I I L D + I
Sbjct: 632 IDSALLRPGRLDQL-IYIPLPDEDSRLNI 659
Score = 72 (30.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
PK IL+ GP G GKT IAR +A + A F I
Sbjct: 241 PKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Score = 64 (27.6 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 38/166 (22%), Positives = 71/166 (42%)
Query: 771 VIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIG-PTGVGK 829
V+ ++++E+D G N K I NR I L + ++ I P +
Sbjct: 603 VLNQLLTEMD----GMNAKKTVFIIGATNR--PDIIDSALLRPGRLDQLIYIPLPDEDSR 656
Query: 830 TEIARRLAKLSNAPFIK-IEAT---KFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKV 885
I + A L +P K ++ T K+T+ G+ G D+ I + +I++ E +I
Sbjct: 657 LNIFK--ACLRKSPVAKDVDVTALAKYTQ-GFSGADITEICQRACKYAIRENIEKDIENE 713
Query: 886 RTRAE--DAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRK 929
R R++ +A E+ ++D V ++ + +S I RK
Sbjct: 714 RRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADI-RK 758
Score = 48 (22.0 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 24 LSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEAN 83
L VR G+ +S+ V +G K+V L + + G+ G+ DA+ F EA
Sbjct: 96 LRVRLGDVISVHQCPDVKYG--------KRVHILPVDDTVEGVTGNLFDAYLKPYFLEAY 147
Query: 84 LEKHQGNL 91
+G+L
Sbjct: 148 RPVRKGDL 155
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 86 (35.3 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DEID I + + N ++ R V + LL
Sbjct: 276 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG-EVERRIVSQ-LLT 333
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL---DSLSIS 509
L++G H+ I GA + +P+ + P L+ GRF +++ D +
Sbjct: 334 LMDGLKSRA--------HV--IVMGATN--RPNSIDPALRRFGRFDREIDIGVPDEIGRL 381
Query: 510 DFTRIMTSTNVCLTKQYE 527
+ RI T N+ L + +
Sbjct: 382 EVLRIHTK-NMKLAEDVD 398
Score = 79 (32.9 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 51/229 (22%), Positives = 92/229 (40%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
K +L GP G GKT +A+ +A A FI ++ + + + G + +R++ D +Q
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF-GES-EANVREIFD-KARQ 571
Query: 877 TRE----F-EINKVRTR-----AEDA--AEDRVIDILVPSKEKSNLDTDFXXXXXXISTR 924
+ F E++ + T+ D A DRV++ L+ + N
Sbjct: 572 SAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 631
Query: 925 QIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKI 984
I LR G LD I I L D + I + A+ + + +
Sbjct: 632 IIDSALLRPGRLDQL-IYIPLPDEDSRLNIFKAALRKSPIAK-DVDIGALAKYTQGFSGA 689
Query: 985 KIRE----AIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKI 1029
I E A K I E K + +++ + + +E++G+ DE+ +I
Sbjct: 690 DITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGV---DEVSEI 735
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
PK IL+ GP G GKT IAR +A + A F I
Sbjct: 241 PKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Score = 48 (22.0 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 24 LSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEAN 83
L VR G+ +S+ V +G K+V L + + G+ G+ DA+ F EA
Sbjct: 96 LRVRLGDVISVHQCPDVKYG--------KRVHILPVDDTVEGVTGNLFDAYLKPYFLEAY 147
Query: 84 LEKHQGNL 91
+G+L
Sbjct: 148 RPVRKGDL 155
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQN--GIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +K+ E E +KA E+N I+F+DEID I + + N ++ R V + LL
Sbjct: 279 EVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG-EVERRIVSQ-LLT 336
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFH----LAKPSDL-IPELQGRFPI-RVELDSLSI 508
L++G + +I + GA + D+ IP+ GR I R+ ++ +
Sbjct: 337 LMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKL 396
Query: 509 SDFTRIMTSTNVC 521
+D + N C
Sbjct: 397 ADDVDLEQIANEC 409
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 54/230 (23%), Positives = 91/230 (39%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID---IS 873
+ +L GP G GKT +A+ +A A FI I+ + + + G + +RD+ D +
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVRDVFDKARAA 575
Query: 874 IKQTREF-EINKV-RTRAEDA------AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQ 925
F E++ + + R A A DRVI+ ++ + N +
Sbjct: 576 APCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDI 635
Query: 926 IFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEE-MTAQIKTMF---SVIGNHRKKT 981
I LR G LD I I L D +I+ + ++ + F + +G
Sbjct: 636 IDPAVLRPGRLDQL-IYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADL 694
Query: 982 RKIKIREAIKLLIDEEANKLLN-EDEIQQKAINNVEQNGIIFLDEIDKIT 1030
+I + A KL I E K + E E Q + E +D + +IT
Sbjct: 695 TEI-CQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 70 (29.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + + F I
Sbjct: 244 PRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Score = 48 (22.0 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 24 LSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEAN 83
L +R G+ VS+ +++G ++ L + + G+ G+ D F F EA
Sbjct: 98 LRIRLGDVVSITPAPNLSYGT--------RIHVLPIDDTIEGLTGNLFDVFLKPYFLEAY 149
Query: 84 LEKHQGNL 91
H+G++
Sbjct: 150 RPLHKGDI 157
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQN--GIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +K+ E E +KA E+N I+F+DEID I + + N ++ R V + LL
Sbjct: 279 EVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG-EVERRIVSQ-LLT 336
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFH----LAKPSDL-IPELQGRFPI-RVELDSLSI 508
L++G + +I + GA + D+ IP+ GR I R+ ++ +
Sbjct: 337 LMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKL 396
Query: 509 SDFTRIMTSTNVC 521
+D + N C
Sbjct: 397 ADDVDLEQIANEC 409
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 54/230 (23%), Positives = 91/230 (39%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID---IS 873
+ +L GP G GKT +A+ +A A FI I+ + + + G + +RD+ D +
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVRDVFDKARAA 575
Query: 874 IKQTREF-EINKV-RTRAEDA------AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQ 925
F E++ + + R A A DRVI+ ++ + N +
Sbjct: 576 APCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDI 635
Query: 926 IFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEE-MTAQIKTMF---SVIGNHRKKT 981
I LR G LD I I L D +I+ + ++ + F + +G
Sbjct: 636 IDPAVLRPGRLDQL-IYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADL 694
Query: 982 RKIKIREAIKLLIDEEANKLLN-EDEIQQKAINNVEQNGIIFLDEIDKIT 1030
+I + A KL I E K + E E Q + E +D + +IT
Sbjct: 695 TEI-CQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 70 (29.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + + F I
Sbjct: 244 PRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Score = 48 (22.0 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 24 LSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEAN 83
L +R G+ VS+ +++G ++ L + + G+ G+ D F F EA
Sbjct: 98 LRIRLGDVVSITPAPNLSYGT--------RIHVLPIDDTIEGLTGNLFDVFLKPYFLEAY 149
Query: 84 LEKHQGNL 91
H+G++
Sbjct: 150 RPLHKGDI 157
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 81 (33.6 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DEID I + + + ++ R V + LL
Sbjct: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG-EVERRIVSQ-LLT 334
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL---DSLSIS 509
L++G H+ I GA + +P+ + P L+ GRF +++ D +
Sbjct: 335 LMDGLKSRA--------HV--IVMGATN--RPNSIDPALRRFGRFDREIDIGVPDEIGRL 382
Query: 510 DFTRIMTSTNVCLTKQYE 527
+ RI T N+ L + +
Sbjct: 383 EVLRIHTK-NMKLAEDVD 399
Score = 77 (32.2 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 40/149 (26%), Positives = 63/149 (42%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
K +L GP G GKT +A+ +A A FI I+ + + + G + +R++ D +Q
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVREIFD-KARQ 572
Query: 877 TRE----F-EINKVRTR----AEDA--AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQ 925
+ F E++ + T+ DA A DRV++ L+ + N
Sbjct: 573 SAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDI 632
Query: 926 IFRKRLREGALDNKEIEIELNDTGPHMEI 954
I LR G LD I I L D +I
Sbjct: 633 IDPALLRPGRLDQL-IYIPLPDEESRYQI 660
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
PK IL+ GP G GKT IAR +A + A F I
Sbjct: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCI 273
Score = 66 (28.3 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 771 VIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGP--LQQEITPKNILMIGPTGVG 828
V+ ++++E+D G N K I NR I P L+ + I + P
Sbjct: 604 VLNQLLTEMD----GMNAKKTVFIIGATNR---PDIIDPALLRPGRLDQLIYIPLPDEES 656
Query: 829 KTEIARR-LAKLSNAPFIKIEA-TKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 886
+ +I + L K A + + A K+T+ G+ G D+ I + +I++ E +I K R
Sbjct: 657 RYQIFKSCLRKSPVAKDVDLRALAKYTQ-GFSGADITEICQRSCKYAIRENIEKDIEKER 715
Query: 887 TRAE--DAAED 895
RAE +A E+
Sbjct: 716 KRAESPEAMEE 726
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 24 LSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFFEAN 83
L VR G+ +S+ V +GN +V L + + G++G+ DA+ F EA
Sbjct: 97 LRVRLGDVISVHQCPDVKYGN--------RVHILPLDDTIEGVSGNIFDAYLKPYFLEAY 148
Query: 84 LEKHQGNL 91
+G+L
Sbjct: 149 RPVRKGDL 156
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIE-ATKFTEVGYVGRDVDTIIRDLIDISI 874
PK I++ GP G KT + + +A S F+ + AT F+ Y+G D + IRD+ +
Sbjct: 604 PKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSP--YLG-DSEQTIRDIFKKAR 660
Query: 875 KQTREF----EINKVRTRAE-------DAAEDRVIDILVPSKEKSNLDTDFXXXXXXIST 923
+ T EI+ + ++ D A+ RV+ + +
Sbjct: 661 QTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRL 720
Query: 924 RQIFRKRLREGALDNKEIEIELNDTGPHMEIM 955
I LR G D K +EI+L D ++I+
Sbjct: 721 DMIDNALLRPGRFD-KILEIKLPDQLSRLKIL 751
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGR---DVDTIIRDLIDI 274
PK IL+ GP G GKT + R + + I I+ K + Y+G ++ I ++ D
Sbjct: 321 PKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISG-SYIGETEENLRNIFQEASDK 379
Query: 275 SIKQT 279
SI ++
Sbjct: 380 SIAKS 384
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 53/236 (22%), Positives = 100/236 (42%)
Query: 396 IDEEANKLLNE-DEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
I E L N E K+I ++F+DEID I S++ + SR V L
Sbjct: 362 IGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQNE-SR--VVGQFLT 418
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFH-----LAKPSDLIPELQGRFPIRVE-LDSLSI 508
L++G G K + I+ A+ + L +P L E++ P + + LD L +
Sbjct: 419 LLDGI------GARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKL 472
Query: 509 --SDFTRIMTSTNVCLTKQYEALLATEGIKIEFV--DDGIQRLAE---IAYCINERTENI 561
S T +N+ L + + + G I+F+ D ++ + Y NE+ EN
Sbjct: 473 YCSKLPISPTPSNL-LDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQNENE 531
Query: 562 GARRLYTAMEKLLEEVSFNSNNISLLVDADYVNSRLGDLSINEDLSRYDSGMEKFQ 617
++ +E E + NN + ++ +++ + ++S +D+ D E+ +
Sbjct: 532 NEKKYLIEIEDFRESIK---NNPASILKGEHLVENISNVSW-DDIGGLDDIKEELR 583
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS--I 874
K +L GP G GKT +A+ +A +A FI ++ + + Y G ++ IRD+ D +
Sbjct: 523 KGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY-GES-ESNIRDIFDKARAA 580
Query: 875 KQTREF--EINKV-RTRAE---DA--AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQI 926
T F E++ + + R DA A DRV++ L+ + N + QI
Sbjct: 581 APTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQI 640
Query: 927 FRKRLREGALDNKEIEIELNDTGPHMEIM 955
LR G LD I + L D + I+
Sbjct: 641 DPALLRPGRLDQL-IYVPLPDEPARLSIL 668
Score = 90 (36.7 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +K+ E E +KA E+N IIF+DEID I + + N ++ R V + LL
Sbjct: 284 EIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNG-EVERRVVSQ-LLT 341
Query: 455 LVEGTTVNTKYGIIK-TDHILFI--ASGAF-HLAKPSDL-IPELQGRFPI-RVELDSLSI 508
L++G + +I T+ I A F + D+ +P+ +GR I R+ ++ +
Sbjct: 342 LMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKL 401
Query: 509 SD 510
+D
Sbjct: 402 AD 403
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
PK ILM GP G GKT +AR +A + A F I + + + + ++ +R + + K
Sbjct: 249 PKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEI--MSKMAGESESNLRKAFEEAEK 306
Query: 278 QTREF----EINKV---RTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFR 330
+ EI+ + R + E RV+ L+ + ++ I
Sbjct: 307 NSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDP 366
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIM 357
R G D +E++I + D +EI+
Sbjct: 367 ALRRFGRFD-REVDIGVPDAEGRLEIL 392
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTM-FSVIGNHRKKTRKIKIREAIKL 394
+D +EI I DT H E P E+ + + + IG +K+ +I RE ++L
Sbjct: 179 VDPEEIAIVAQDTIIHCE-GEPINREDEENSLNEVGYDDIGGCKKQMAQI--RELVEL 233
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS--I 874
K +L GP G GKT +A+ +A +A FI ++ + + Y G ++ IRD+ D +
Sbjct: 523 KGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY-GES-ESNIRDIFDKARAA 580
Query: 875 KQTREF--EINKV-RTRAE---DA--AEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQI 926
T F E++ + + R DA A DRV++ L+ + N + QI
Sbjct: 581 APTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQI 640
Query: 927 FRKRLREGALDNKEIEIELNDTGPHMEIM 955
LR G LD I + L D + I+
Sbjct: 641 DPALLRPGRLDQL-IYVPLPDEPARLSIL 668
Score = 90 (36.7 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +K+ E E +KA E+N IIF+DEID I + + N ++ R V + LL
Sbjct: 284 EIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNG-EVERRVVSQ-LLT 341
Query: 455 LVEGTTVNTKYGIIK-TDHILFI--ASGAF-HLAKPSDL-IPELQGRFPI-RVELDSLSI 508
L++G + +I T+ I A F + D+ +P+ +GR I R+ ++ +
Sbjct: 342 LMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKL 401
Query: 509 SD 510
+D
Sbjct: 402 AD 403
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
PK ILM GP G GKT +AR +A + A F I + + + + ++ +R + + K
Sbjct: 249 PKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEI--MSKMAGESESNLRKAFEEAEK 306
Query: 278 QTREF----EINKV---RTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFR 330
+ EI+ + R + E RV+ L+ + ++ I
Sbjct: 307 NSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDP 366
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIM 357
R G D +E++I + D +EI+
Sbjct: 367 ALRRFGRFD-REVDIGVPDAEGRLEIL 392
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTM-FSVIGNHRKKTRKIKIREAIKL 394
+D +EI I DT H E P E+ + + + IG +K+ +I RE ++L
Sbjct: 179 VDPEEIAIVAQDTIIHCE-GEPINREDEENSLNEVGYDDIGGCKKQMAQI--RELVEL 233
>TAIR|locus:2043619 [details] [associations]
symbol:AT2G45500 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 EMBL:AC003680 SMART:SM00745
HOGENOM:HOG000225146 IPI:IPI00786031 RefSeq:NP_182074.4
UniGene:At.36623 ProteinModelPortal:A8MRR2 SMR:A8MRR2 PaxDb:A8MRR2
PRIDE:A8MRR2 EnsemblPlants:AT2G45500.1 GeneID:819158
KEGG:ath:AT2G45500 TAIR:At2g45500 InParanoid:A8MRR2 OMA:EMINTTI
PhylomeDB:A8MRR2 ProtClustDB:CLSN2695921 Genevestigator:A8MRR2
Uniprot:A8MRR2
Length = 491
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 36/130 (27%), Positives = 70/130 (53%)
Query: 154 KALQENTELMPDEIIKKSLVIAEIV--SELDKY--VIGQNRAKRAVA-IALRNRWRRQQI 208
K ++E+ + D++++ ++ IV S K+ V G N AK+A+ + + RR
Sbjct: 189 KPVKESGNVYDDKLVE--MINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLF 246
Query: 209 TGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTII 268
TG L++ + +L+ GP G GKT +A+ +A S A F + A+ T +VG + + ++
Sbjct: 247 TG-LRRPA--RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK-WVG-EAEKLV 301
Query: 269 RDLIDISIKQ 278
+ L ++I +
Sbjct: 302 KTLFQVAISR 311
Score = 105 (42.0 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 36/130 (27%), Positives = 70/130 (53%)
Query: 752 KALQENTELMPDEIIKKSLVIAEIV--SELDKY--VIGQNRAKRAVA-IALRNRWRRQQI 806
K ++E+ + D++++ ++ IV S K+ V G N AK+A+ + + RR
Sbjct: 189 KPVKESGNVYDDKLVE--MINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLF 246
Query: 807 TGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTII 866
TG L++ + +L+ GP G GKT +A+ +A S A F + A+ T +VG + + ++
Sbjct: 247 TG-LRRPA--RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK-WVG-EAEKLV 301
Query: 867 RDLIDISIKQ 876
+ L ++I +
Sbjct: 302 KTLFQVAISR 311
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 399 EANKLLNEDEIQQKAINNVEQNGIIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVE 457
EA KL+ + Q AI+ Q +IF+DEID I +TRS+ N + SR ++ + L +
Sbjct: 296 EAEKLVKT--LFQVAISR--QPSVIFMDEIDSIMSTRSTSEN--EASRR-LKSEFLIQFD 348
Query: 458 GTTVN 462
G T N
Sbjct: 349 GVTSN 353
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 997 EANKLLNEDEIQQKAINNVEQNGIIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVE 1055
EA KL+ + Q AI+ Q +IF+DEID I +TRS+ N + SR ++ + L +
Sbjct: 296 EAEKLVKT--LFQVAISR--QPSVIFMDEIDSIMSTRSTSEN--EASRR-LKSEFLIQFD 348
Query: 1056 GTTVN 1060
G T N
Sbjct: 349 GVTSN 353
Score = 37 (18.1 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 205 RQQITGPLQQEITPKNILMIGP-TGVGKTEIARRLAKLSNA 244
R++I+ Q +++ + + +G TGVG +E R +A S+A
Sbjct: 113 REKISN-WQNQVSER-LQALGKRTGVGMSENKRTVAYPSSA 151
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 99 (39.9 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 43/154 (27%), Positives = 71/154 (46%)
Query: 814 ITP-KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI 872
++P K +L GP G GKT +A+ +A +A FI ++ + + Y G ++ IRD+ D
Sbjct: 518 LSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY-GES-ESNIRDIFDK 575
Query: 873 S--IKQTREF--EINKV-RTRAE---DA--AEDRVIDILVPSKEKSNLDTDFXXXXXXIS 922
+ T F E++ + + R DA A DRV++ L+ + N +
Sbjct: 576 ARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNR 635
Query: 923 TRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS 956
QI LR G LD I + L D + I++
Sbjct: 636 PDQIDPAILRPGRLDQL-IYVPLPDENARLSILN 668
Score = 88 (36.0 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +K+ E E +KA E+N IIF+DEID I + + N ++ R V + LL
Sbjct: 283 EVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG-EVERRVVSQ-LLT 340
Query: 455 LVEGTTVNTKYGIIK-TDHILFI--ASGAF-HLAKPSDL-IPELQGRFPI-RVELDSLSI 508
L++G + +I T+ I A F + D+ IP+ GR + R+ ++ +
Sbjct: 341 LMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKL 400
Query: 509 SD 510
+D
Sbjct: 401 AD 402
Score = 38 (18.4 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 2 HKPRNVSSAKDSGMEKFQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNS 50
HKP +S D E T IL ++ + + L D +VI NS
Sbjct: 5 HKPLLDASGVDPREEDKTATAILRRKKKDNMLLVDDAINDDNSVIAINS 53
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 95 (38.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI--S 275
P+ +L+ GP G GKT IA LA PFI I A G G + IRDL D S
Sbjct: 239 PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVS-GMSGES-EKKIRDLFDEARS 296
Query: 276 IKQTREF--EINKVRTRAEDAA----EDRVIDILVPSKEKSNLD 313
+ F EI+ + + + A E R++ L+ S ++ ++
Sbjct: 297 LAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTME 340
Score = 89 (36.4 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID---I 872
P +L+ GP G GKT +A+ +A S A FI I+ + YVG + IR +
Sbjct: 567 PGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGES-ERSIRQVFTRARA 624
Query: 873 SIKQTREF-EINKVRTRAEDAAED---RVIDILVPSKEKSNLDTDFXXXXXXISTRQIFR 928
S+ F E++ + R + + + RV++ L+ + N I
Sbjct: 625 SVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDP 684
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIM 955
LR G LD K + IEL +T ++I+
Sbjct: 685 AMLRPGRLD-KSLFIELPNTEEKLDII 710
Score = 41 (19.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 157 QENTELMPDEIIKKSLVIAEIVSELDKYV 185
+E + +E+ KK+++I +E++K +
Sbjct: 121 EEEKPSLEEELAKKNMMIERDTNEMNKRI 149
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 98 (39.6 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 155 ALQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQI-TGPLQ 213
AL M D I+ +S+ + V+ D + G AK A+ RR + TG
Sbjct: 224 ALAHLDSKMVDHILGESMHDFKPVAWED--IAGLESAKSTFLEAIIMPLRRPDLFTGV-- 279
Query: 214 QEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
P+ +L+ GP G GKT IA+ +A + A F I + T +VG D + +++ L
Sbjct: 280 -RCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSK-WVG-DAEKLVKTLFA 336
Query: 274 IS 275
++
Sbjct: 337 VA 338
Score = 67 (28.6 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 413 AINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 468
A+ Q IIF+DE+D + ++ S N N R ++ + L ++G N + ++
Sbjct: 336 AVAAAHQPAIIFIDEVDSLLSKRSANENESTLR--LKNEFLIHLDGAASNEEIRVL 389
Score = 52 (23.4 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 787 NRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLA-KLSNAPFI 845
N R + I NR Q++ +++ + + + PT + +I +L ++ + +
Sbjct: 383 NEEIRVLVIGATNR--PQELDEAVRRRFVRRLYVPL-PTREARQKIIEKLIHQVKHNLDV 439
Query: 846 K--IEATKFTEVGYVGRDVDTIIR 867
+ IE + T+ GY G DVDT+ R
Sbjct: 440 RQVIELAELTD-GYSGADVDTLCR 462
>TIGR_CMR|CBU_1196 [details] [associations]
symbol:CBU_1196 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:227377 "Coxiella burnetii RSA 493"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 OMA:DRETQPT GO:GO:0004176
InterPro:IPR019489 PANTHER:PTHR11638:SF14 Pfam:PF10431
SMART:SM01086 TIGRFAMs:TIGR02639 RefSeq:NP_820191.1 HSSP:P15716
ProteinModelPortal:Q83CD0 SMR:Q83CD0 GeneID:1209100
KEGG:cbu:CBU_1196 PATRIC:17931135 ProtClustDB:CLSK914606
BioCyc:CBUR227377:GJ7S-1184-MONOMER Uniprot:Q83CD0
Length = 753
Score = 106 (42.4 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 58/264 (21%), Positives = 117/264 (44%)
Query: 768 KSLVIAEIVSELDKYVIGQNRAKRAVAIALR-NRWRRQQITGPLQQEITPKNILMIGPTG 826
K L+I ++ +L + V GQ++A ++ A++ +R P+ + L+ GPTG
Sbjct: 450 KELLI-DLPKQLKRVVFGQSQAVESLCNAIKLSRAGLNNADKPVG------SFLLAGPTG 502
Query: 827 VGKTEIARRLAKLSNAPFIKIEATKFTE-----------VGYVGRDVDTIIRDLIDISIK 875
VGKTE+ R+LA+ I+ + +++ E GYVG D ++ ++I K
Sbjct: 503 VGKTEVTRQLAQALGIELIRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEIIR---K 559
Query: 876 QTREFEINKVRTRAEDAAEDRVIDILVPS--KEKSNLDTDFXXXXXXISTRQIFRKRLRE 933
Q + +A + ++ ++ + + DF ++T ++L
Sbjct: 560 QPHAVLLLDEIEKAHPDIFNILLQVMDYGYLTDNTGRKADFRHVIIVMTTNA-GAEQLER 618
Query: 934 GALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMF----SVIGNHRKKTRKIK--IR 987
GA+ ++E + G SP + A I+ + +++ K TR+++ ++
Sbjct: 619 GAIGFAVQDMEQENLGAIKHYFSPEFRNRLDAVIQFKYLDTTTILKIVDKFTRELRDQLK 678
Query: 988 E-AIKLLIDEEANKLLNEDEIQQK 1010
E I+L I +A + L E +K
Sbjct: 679 EKGIRLTISSDAKQWLAERGYNEK 702
Score = 61 (26.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAKL 241
T N L++G GVGKT I LA+L
Sbjct: 210 TKNNPLLVGDAGVGKTAIVEGLAQL 234
Score = 55 (24.4 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 412 KAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVE----GTTVNTKY-G 466
KA++ E +IF+DEI + S T + + + + LL E G T ++
Sbjct: 276 KALSR-EPGAVIFIDEIHNLIGAGSATGGT-MDASNLIKPLLTTGELRCMGATTYEEFRN 333
Query: 467 IIKTDHILFIASGAFHLAKPS--DLIPELQG 495
DH L + +PS D + LQG
Sbjct: 334 FFSKDHALLRRFQRIDVKEPSVTDTVKILQG 364
>TIGR_CMR|SPO_3169 [details] [associations]
symbol:SPO_3169 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR013461
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
KO:K03694 GO:GO:0004176 InterPro:IPR019489 PANTHER:PTHR11638:SF14
Pfam:PF10431 SMART:SM01086 TIGRFAMs:TIGR02639 RefSeq:YP_168372.1
ProteinModelPortal:Q5LNN4 SMR:Q5LNN4 GeneID:3195159
KEGG:sil:SPO3169 PATRIC:23379785 OMA:YMEKHAL ProtClustDB:CLSK934078
Uniprot:Q5LNN4
Length = 775
Score = 114 (45.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 674 LLDFFEANLE-KHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLE 732
L +FE + E ++ + ++++VEL+ + NDR +L + E G L
Sbjct: 373 LKPYFEEHHEVRYTADAIKSAVELSARYINDR---KLPDKAIDVIDEA-----GAAQHLV 424
Query: 733 PENXXXXXXXXXXXXXXXXKALQENTELMPDEIIKKSL-VIAEIVSELDKYVIGQNRAKR 791
E+ K + + P + K V+ ++ + L + V GQ++A
Sbjct: 425 AESKRRKTIGVKEIEAVVAKIAR----IPPKNVTKDDAEVLKDLEASLKRVVFGQDKAIE 480
Query: 792 AVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATK 851
A++ A++ R + P ++ I N L GPTGVGKTE+A++LA+ ++ + ++
Sbjct: 481 ALSSAIK--LARAGLREP-EKPIG--NYLFAGPTGVGKTEVAKQLAETLGVELLRFDMSE 535
Query: 852 FTEV-----------GYVGRDVDTIIRDLID 871
+ E GYVG D ++ D +D
Sbjct: 536 YMEKHAVSRLIGAPPGYVGFDQGGLLTDGVD 566
Score = 62 (26.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 22/63 (34%), Positives = 28/63 (44%)
Query: 179 SELDKYVIGQNRAKRAVAI-ALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARR 237
S L KY + N RA I L R + + N L++G GVGKT IA
Sbjct: 179 SALSKYCVNLNAKSRAGDIDPLIGRDHEVERCIQVLCRRRKNNPLLVGDPGVGKTAIAEG 238
Query: 238 LAK 240
LA+
Sbjct: 239 LAR 241
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 814 ITP-KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+TP K +L GP G GKT +A+ +A A FI I+ + + + G + +R++ D
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVREIFD 564
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DE+D I + + + ++ R V + LL
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG-EVERRIVSQ-LLT 330
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL 503
L++G + + H++ +A+ +P+ + P L+ GRF V++
Sbjct: 331 LMDG--------LKQRAHVIVMAA----TNRPNSIDPALRRFGRFDREVDI 369
Score = 72 (30.4 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + A F I
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Score = 40 (19.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 931 LREGALDNKEIEIELNDTGPHMEIM------SPPGME---EMTAQIKTMFSV--IGNHRK 979
LR G LD I I L D + I+ SP + E A++ FS + +
Sbjct: 634 LRPGRLDQL-IYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ 692
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNN 1038
+ K+ IRE+I+ I E + N ++ + + V + +E + RS +N+
Sbjct: 693 RACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDND 751
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 814 ITP-KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+TP K +L GP G GKT +A+ +A A FI I+ + + + G + +R++ D
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVREIFD 564
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DE+D I + + + ++ R V + LL
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG-EVERRIVSQ-LLT 330
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL 503
L++G + + H++ +A+ +P+ + P L+ GRF V++
Sbjct: 331 LMDG--------LKQRAHVIVMAA----TNRPNSIDPALRRFGRFDREVDI 369
Score = 72 (30.4 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + A F I
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Score = 40 (19.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 931 LREGALDNKEIEIELNDTGPHMEIM------SPPGME---EMTAQIKTMFSV--IGNHRK 979
LR G LD I I L D + I+ SP + E A++ FS + +
Sbjct: 634 LRPGRLDQL-IYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ 692
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNN 1038
+ K+ IRE+I+ I E + N ++ + + V + +E + RS +N+
Sbjct: 693 RACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDND 751
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 814 ITP-KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+TP K +L GP G GKT +A+ +A A FI I+ + + + G + +R++ D
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVREIFD 564
Score = 76 (31.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DE+D I + + + ++ R V + LL
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG-EVERRIVSQ-LLT 330
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL 503
L++G + + H++ +A+ +P+ + P L+ GRF V++
Sbjct: 331 LMDG--------LKQRAHVIVMAA----TNRPNSIDPALRRFGRFDREVDI 369
Score = 72 (30.4 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + A F I
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLI 269
Score = 40 (19.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 931 LREGALDNKEIEIELNDTGPHMEIM------SPPGME---EMTAQIKTMFSV--IGNHRK 979
LR G LD I I L D + I+ SP + E A++ FS + +
Sbjct: 634 LRPGRLDQL-IYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ 692
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNN 1038
+ K+ IRE+I+ I E + N ++ + + V + +E + RS +N+
Sbjct: 693 RACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDND 751
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 96 (38.9 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
P+ IL+ GP+G GKT +A+ +A P I AT+ T G G + +R L +I
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITS-GVSGES-EARVRTLFSNAIA 307
Query: 278 QTREF----EINKVRTRAEDAAED---RVIDILVPSKEKSN 311
Q EI+ + + E A++D R++ L+ + N
Sbjct: 308 QAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLN 348
Score = 78 (32.5 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVG 859
+P +LM GP G GKT +A+ +A A FI ++ + YVG
Sbjct: 599 SPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNK-YVG 642
Score = 48 (22.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 400 ANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNN 440
+N NE +Q +Q II +D TT +S NNN
Sbjct: 352 SNNSTNEPN-EQTEQQQQQQQDIIEVDSQATTTTTASNNNN 391
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 76 (31.8 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 814 ITP-KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+TP K +L GP G GKT +A+ +A A FI I+ + + + G + +R++ D
Sbjct: 524 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF-GES-EANVREIFD 580
Score = 76 (31.8 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 398 EEANKLLNEDEIQ-QKAINNVEQNG--IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLP 454
E +KL E E +KA E+N IIF+DE+D I + + + ++ R V + LL
Sbjct: 289 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG-EVERRIVSQ-LLT 346
Query: 455 LVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQ--GRFPIRVEL 503
L++G + + H++ +A+ +P+ + P L+ GRF V++
Sbjct: 347 LMDG--------LKQRAHVIVMAA----TNRPNSIDPALRRFGRFDREVDI 385
Score = 72 (30.4 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P+ IL+ GP G GKT IAR +A + A F I
Sbjct: 254 PRGILLYGPPGTGKTLIARAVANETGAFFFLI 285
Score = 40 (19.1 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 931 LREGALDNKEIEIELNDTGPHMEIM------SPPGME---EMTAQIKTMFSV--IGNHRK 979
LR G LD I I L D + I+ SP + E A++ FS + +
Sbjct: 650 LRPGRLDQL-IYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ 708
Query: 980 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNN 1038
+ K+ IRE+I+ I E + N ++ + + V + +E + RS +N+
Sbjct: 709 RACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDND 767
>TIGR_CMR|CBU_0094 [details] [associations]
symbol:CBU_0094 "clpB protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0009408 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HOGENOM:HOG000218211 KO:K03695 TIGRFAMs:TIGR03346
RefSeq:NP_819146.1 ProteinModelPortal:Q83F55 SMR:Q83F55
PRIDE:Q83F55 GeneID:1207964 KEGG:cbu:CBU_0094 PATRIC:17928865
OMA:KNSLENM ProtClustDB:CLSK913830
BioCyc:CBUR227377:GJ7S-94-MONOMER Uniprot:Q83F55
Length = 859
Score = 109 (43.4 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 777 SELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRL 836
+EL K VIGQ+ A AVA A+R R ++ P + + + L +GPTGVGKTE+ + L
Sbjct: 566 TELHKRVIGQDEAVNAVANAIRRS--RAGLSDP-NRPVG--SFLFLGPTGVGKTELCKAL 620
Query: 837 AKL---SNAPFIKIEATKFTEVGYVGR 860
A + ++I+ ++F E V R
Sbjct: 621 AVFLFDTEDAMVRIDMSEFMEKHSVAR 647
Score = 58 (25.5 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 204 RRQQITGPLQ--QEITPKNILMIGPTGVGKTEIARRLAK 240
R ++I +Q Q T N ++IG GVGKT I LA+
Sbjct: 183 RDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Score = 54 (24.1 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 385 KIKI-REAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEI---DKITTRSSQNNN 440
++KI REA+K DE + K L++ E + I NVE+ L+E+ +K + +Q
Sbjct: 421 QLKIEREALKKETDEASKKRLSDLETE---IKNVEKE-YSDLEEVWKSEKASLHGTQQIK 476
Query: 441 TDISRAGVQ 449
++ +A ++
Sbjct: 477 EELEQARIE 485
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 88 (36.0 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 875
P +LM GP G GKT +A+ +A S A FI I+ + YVG + +R + +
Sbjct: 556 PAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGES-EKAVRQVFQRARA 613
Query: 876 QTREF----EINKVRTRAEDAAED---RVIDILVPSKEKSNLDTDFXXXXXXISTRQIFR 928
T E++ + R + + + RV++ L+ + N I
Sbjct: 614 STPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDP 673
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIM 955
LR G LD K + IEL +EI+
Sbjct: 674 AMLRPGRLD-KTLYIELPTPEERLEIL 699
Score = 82 (33.9 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251
P+ +L+ GP G GKT IA LA PFI I A
Sbjct: 227 PRGVLLYGPPGCGKTTIANALAGELKVPFINISA 260
Score = 51 (23.0 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 422 IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG 466
+IF+DEID IT + ++ + V + LL L++ T+ G
Sbjct: 289 LIFMDEIDAITPKRDGGAQREMEKRIVAQ-LLTLMDELTLEKTGG 332
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 88 (36.0 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 39/147 (26%), Positives = 62/147 (42%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 875
P +LM GP G GKT +A+ +A S A FI I+ + YVG + +R + +
Sbjct: 556 PAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGES-EKAVRQVFQRARA 613
Query: 876 QTREF----EINKVRTRAEDAAED---RVIDILVPSKEKSNLDTDFXXXXXXISTRQIFR 928
T E++ + R + + + RV++ L+ + N I
Sbjct: 614 STPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDP 673
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIM 955
LR G LD K + IEL +EI+
Sbjct: 674 AMLRPGRLD-KTLYIELPTPEERLEIL 699
Score = 82 (33.9 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEA 251
P+ +L+ GP G GKT IA LA PFI I A
Sbjct: 227 PRGVLLYGPPGCGKTTIANALAGELKVPFINISA 260
Score = 51 (23.0 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 422 IIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG 466
+IF+DEID IT + ++ + V + LL L++ T+ G
Sbjct: 289 LIFMDEIDAITPKRDGGAQREMEKRIVAQ-LLTLMDELTLEKTGG 332
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1165 1121 0.00089 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 85
No. of states in DFA: 601 (64 KB)
Total size of DFA: 364 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 102.73u 0.12s 102.85t Elapsed: 00:00:33
Total cpu time: 102.77u 0.12s 102.89t Elapsed: 00:00:35
Start: Thu Aug 15 14:26:36 2013 End: Thu Aug 15 14:27:11 2013