RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2392
(1165 letters)
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 418 bits (1076), Expect = e-136
Identities = 266/438 (60%), Positives = 354/438 (80%), Gaps = 7/438 (1%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 7 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 66
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R+ EI K R RAED A
Sbjct: 67 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVA 126
Query: 296 EDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELND-TGPHM 354
E+R++D L+P + + N +++ STRQ FRK+LREG LD+KEIEI+++ +
Sbjct: 127 EERILDALLPPAKNQ--WGEVENHDSHSSTRQAFRKKLREGQLDDKEIEIDVSAGVSMGV 184
Query: 355 EIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAI 414
EIM+PPGMEEMT Q++++F +G+ + K RK+KI++A+K LID+EA KL+N +E++QKAI
Sbjct: 185 EIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKAI 244
Query: 415 NNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHIL 474
+ VEQNGI+F+DEIDKI + + + D+SR GVQRDLLPLVEG+TV+TK+G++KTDHIL
Sbjct: 245 DAVEQNGIVFIDEIDKICKK-GEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHIL 303
Query: 475 FIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEG 534
FIASGAF +A+PSDLIPELQGR PIRVEL +LS +DF RI+T + LT+QY+AL+ATEG
Sbjct: 304 FIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEG 363
Query: 535 IKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFN---SNNISLLVDAD 591
+ I F D ++++AE A+ +NE+TENIGARRL+T ME+L++++SF+ N ++ +DA
Sbjct: 364 VNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAA 423
Query: 592 YVNSRLGDLSINEDLSRY 609
YV LG++ NEDLSR+
Sbjct: 424 YVADALGEVVENEDLSRF 441
Score = 365 bits (938), Expect = e-116
Identities = 242/387 (62%), Positives = 317/387 (81%), Gaps = 4/387 (1%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 7 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 66
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R+ EI K R RAED A
Sbjct: 67 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVA 126
Query: 894 EDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELND-TGPHM 952
E+R++D L+P + + N +++ STRQ FRK+LREG LD+KEIEI+++ +
Sbjct: 127 EERILDALLPPAKNQ--WGEVENHDSHSSTRQAFRKKLREGQLDDKEIEIDVSAGVSMGV 184
Query: 953 EIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAI 1012
EIM+PPGMEEMT Q++++F +G+ + K RK+KI++A+K LID+EA KL+N +E++QKAI
Sbjct: 185 EIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKAI 244
Query: 1013 NNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHIL 1072
+ VEQNGI+F+DEIDKI + + + D+SR GVQRDLLPLVEG+TV+TK+G++KTDHIL
Sbjct: 245 DAVEQNGIVFIDEIDKICKK-GEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHIL 303
Query: 1073 FIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEG 1132
FIASGAF +A+PSDLIPELQGR PIRVEL +LS +DF RI+T + LT+QY+AL+ATEG
Sbjct: 304 FIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEG 363
Query: 1133 IKIEFVDDGIQRLAEIAYCINERTENI 1159
+ I F D ++++AE A+ +NE+TENI
Sbjct: 364 VNIAFTTDAVKKIAEAAFRVNEKTENI 390
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 174 bits (441), Expect = 6e-49
Identities = 127/282 (45%), Positives = 186/282 (65%), Gaps = 12/282 (4%)
Query: 331 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
+R++ E+ ++ ++ P G+ + T + + + K K E
Sbjct: 35 RRMQLQEPLRHEVTP------KNILMIGPTGVGK-TEIARRLAKLANAPFIKVEATKFTE 87
Query: 391 AIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQR 450
+ + ++ D I+ VEQNGI+F+DEIDKI + + + D+SR GVQR
Sbjct: 88 VGYVGKEVDSIIRDLTDSAGGA-IDAVEQNGIVFIDEIDKIC-KKGEYSGADVSREGVQR 145
Query: 451 DLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISD 510
DLLPLVEG+TV+TK+G++KTDHILFIASGAF +A+PSDLIPELQGR PIRVEL +LS +D
Sbjct: 146 DLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAAD 205
Query: 511 FTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAM 570
F RI+T + LT+QY+AL+ATEG+ I F D ++++AE A+ +NE+TENIGARRL+T M
Sbjct: 206 FERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVM 265
Query: 571 EKLLEEVSFN---SNNISLLVDADYVNSRLGDLSINEDLSRY 609
E+L++++SF+ N ++ +DA YV LG++ NEDLSR+
Sbjct: 266 ERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRF 307
Score = 127 bits (320), Expect = 7e-33
Identities = 103/231 (44%), Positives = 149/231 (64%), Gaps = 9/231 (3%)
Query: 929 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
+R++ E+ ++ ++ P G+ + T + + + K K E
Sbjct: 35 RRMQLQEPLRHEVTP------KNILMIGPTGVGK-TEIARRLAKLANAPFIKVEATKFTE 87
Query: 989 AIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQR 1048
+ + ++ D I+ VEQNGI+F+DEIDKI + + + D+SR GVQR
Sbjct: 88 VGYVGKEVDSIIRDLTDSAGGA-IDAVEQNGIVFIDEIDKIC-KKGEYSGADVSREGVQR 145
Query: 1049 DLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISD 1108
DLLPLVEG+TV+TK+G++KTDHILFIASGAF +A+PSDLIPELQGR PIRVEL +LS +D
Sbjct: 146 DLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAAD 205
Query: 1109 FTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENI 1159
F RI+T + LT+QY+AL+ATEG+ I F D ++++AE A+ +NE+TENI
Sbjct: 206 FERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENI 256
Score = 101 bits (251), Expect = 8e-24
Identities = 88/138 (63%), Positives = 102/138 (73%), Gaps = 7/138 (5%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 235
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 7 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 66
Query: 236 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 295
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D + E N + E
Sbjct: 67 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDE--- 123
Query: 296 EDRVIDILVPSKEKSNLD 313
ID + E S D
Sbjct: 124 ----IDKICKKGEYSGAD 137
Score = 101 bits (251), Expect = 8e-24
Identities = 88/138 (63%), Positives = 102/138 (73%), Gaps = 7/138 (5%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIA 833
EIVSELD+++IGQ AKRAVAIALRNRWRR Q+ PL+ E+TPKNILMIGPTGVGKTEIA
Sbjct: 7 EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 66
Query: 834 RRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAA 893
RRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D + E N + E
Sbjct: 67 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDE--- 123
Query: 894 EDRVIDILVPSKEKSNLD 911
ID + E S D
Sbjct: 124 ----IDKICKKGEYSGAD 137
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 171 bits (434), Expect = 2e-47
Identities = 96/446 (21%), Positives = 161/446 (36%), Gaps = 111/446 (24%)
Query: 176 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQ----------------ITGPLQQEITPK 219
E+ + LD YVIGQ +AK+ ++A+ N ++R + + E++
Sbjct: 10 ELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKS 69
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
NIL+IGPTG GKT +A+ LAK + P +AT TE GYVG DV+ I+ L+ S
Sbjct: 70 NILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNV 129
Query: 280 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALD 339
++ A+ ++ I +D N TR + + +++ L
Sbjct: 130 QK-------------AQKGIVFI-------DEIDKISRLSENRSITRDVSGEGVQQALLK 169
Query: 340 NKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 399
E + PP K RK I
Sbjct: 170 IVE----------GSLVNIPP--------------------KGGRKHPEGNFI------- 192
Query: 400 ANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGT 459
Q +++ D + +I + + N
Sbjct: 193 -----------QIDTSDILFICAGAFDGLAEIIKKRTTQNVLGF---------------- 225
Query: 460 TVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTN 519
T+ + K + + H LIPEL GR P+ LDS+S+ I+
Sbjct: 226 ---TQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPK 282
Query: 520 VCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSF 579
L KQY+ L + + + F ++ I+ +A++A GAR L +E ++ F
Sbjct: 283 NALIKQYQQLFKMDEVDLIFEEEAIKEIAQLAL-----ERKTGARGLRAIIEDFCLDIMF 337
Query: 580 N---SNNISLLVDADYVNSRLGDLSI 602
+ + + D V + L I
Sbjct: 338 DLPKLKGSEVRITKDCVLKQAEPLII 363
Score = 138 bits (347), Expect = 7e-36
Identities = 86/393 (21%), Positives = 144/393 (36%), Gaps = 103/393 (26%)
Query: 774 EIVSELDKYVIGQNRAKRAVAIALRNRWRRQQ----------------ITGPLQQEITPK 817
E+ + LD YVIGQ +AK+ ++A+ N ++R + + E++
Sbjct: 10 ELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKS 69
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
NIL+IGPTG GKT +A+ LAK + P +AT TE GYVG DV+ I+ L+ S
Sbjct: 70 NILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNV 129
Query: 878 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALD 937
++ A+ ++ I +D N TR + + +++ L
Sbjct: 130 QK-------------AQKGIVFI-------DEIDKISRLSENRSITRDVSGEGVQQALLK 169
Query: 938 NKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 997
E + PP K RK I
Sbjct: 170 IVE----------GSLVNIPP--------------------KGGRKHPEGNFI------- 192
Query: 998 ANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGT 1057
Q +++ D + +I + + N
Sbjct: 193 -----------QIDTSDILFICAGAFDGLAEIIKKRTTQNVLGF---------------- 225
Query: 1058 TVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTN 1117
T+ + K + + H LIPEL GR P+ LDS+S+ I+
Sbjct: 226 ---TQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPK 282
Query: 1118 VCLTKQYEALLATEGIKIEFVDDGIQRLAEIAY 1150
L KQY+ L + + + F ++ I+ +A++A
Sbjct: 283 NALIKQYQQLFKMDEVDLIFEEEAIKEIAQLAL 315
>d1m4ya_ d.153.1.4 (A:) HslV (ClpQ) protease {Thermotoga maritima
[TaxId: 2336]}
Length = 171
Score = 134 bits (337), Expect = 1e-36
Identities = 92/164 (56%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTIL VRR + +GGDGQVTFG+ ++K +A+KVRKL + +VLAG AGS ADA TL D F
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGIG 140
EA L + GNL +A+VELAK+WR DR LRRLEA+LL A++E II+GNG+V++P++
Sbjct: 61 EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAA 120
Query: 141 AIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 184
AIGSGG +A +AAKAL NT+L EI++K++ IA E+ Y
Sbjct: 121 AIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIA---GEICIY 161
Score = 134 bits (337), Expect = 1e-36
Identities = 92/164 (56%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTIL VRR + +GGDGQVTFG+ ++K +A+KVRKL + +VLAG AGS ADA TL D F
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGIG 738
EA L + GNL +A+VELAK+WR DR LRRLEA+LL A++E II+GNG+V++P++
Sbjct: 61 EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAA 120
Query: 739 AIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 782
AIGSGG +A +AAKAL NT+L EI++K++ IA E+ Y
Sbjct: 121 AIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIA---GEICIY 161
>d1g3ka_ d.153.1.4 (A:) HslV (ClpQ) protease {Haemophilus influenzae
[TaxId: 727]}
Length = 173
Score = 126 bits (317), Expect = 6e-34
Identities = 97/165 (58%), Positives = 128/165 (77%), Gaps = 4/165 (2%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+SVRR +V +GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEP-ENGI 139
E LE HQG+L++++VELAK+WR DR LR+LEAML+ A+ + +LIITG GDV++P E+ I
Sbjct: 61 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 120
Query: 140 GAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 184
AIGSGG +A SAA+AL ENTEL EI++KSL IA ++ +
Sbjct: 121 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIA---GDICVF 162
Score = 126 bits (317), Expect = 6e-34
Identities = 97/165 (58%), Positives = 128/165 (77%), Gaps = 4/165 (2%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+SVRR +V +GGDGQV+ GN +MK +A+KVR+LY +VLAG AG TADAFTL + F
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEP-ENGI 737
E LE HQG+L++++VELAK+WR DR LR+LEAML+ A+ + +LIITG GDV++P E+ I
Sbjct: 61 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 120
Query: 738 GAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 782
AIGSGG +A SAA+AL ENTEL EI++KSL IA ++ +
Sbjct: 121 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIA---GDICVF 162
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis
[TaxId: 1423]}
Length = 180
Score = 121 bits (304), Expect = 4e-32
Identities = 87/170 (51%), Positives = 125/170 (73%), Gaps = 6/170 (3%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 76
F TTI +V+ + ++ GDGQVTFG V+MK++A+KVRKL+ +VLAG AGS ADAFTL
Sbjct: 3 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 62
Query: 77 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 136
+ FEA LE++ GNL RA+VELAKEWR+D+ LR+LEAML+ N++T L+++G G+V+EP+
Sbjct: 63 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 122
Query: 137 NGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIAEIVSELDKY 184
+GI AIGSGG +A +A +AL+++ + EI + +L A E+ Y
Sbjct: 123 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETA---GEICVY 169
Score = 121 bits (304), Expect = 4e-32
Identities = 87/170 (51%), Positives = 125/170 (73%), Gaps = 6/170 (3%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGN-VIMKNSAKKVRKLYQNQVLAGIAGSTADAFTL 674
F TTI +V+ + ++ GDGQVTFG V+MK++A+KVRKL+ +VLAG AGS ADAFTL
Sbjct: 3 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 62
Query: 675 LDFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPE 734
+ FEA LE++ GNL RA+VELAKEWR+D+ LR+LEAML+ N++T L+++G G+V+EP+
Sbjct: 63 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 122
Query: 735 NGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIAEIVSELDKY 782
+GI AIGSGG +A +A +AL+++ + EI + +L A E+ Y
Sbjct: 123 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETA---GEICVY 169
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 76.3 bits (186), Expect = 3e-16
Identities = 23/188 (12%), Positives = 57/188 (30%), Gaps = 4/188 (2%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 278
K + ++G GK+ + +LA + N +F G + D +++
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGH 67
Query: 279 TREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGAL 338
R + + + I + F + +
Sbjct: 68 QRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNT-- 125
Query: 339 DNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAI-KLLID 397
+ + ++++ + K + I + R +++ I K+L +
Sbjct: 126 -EWVDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNE 184
Query: 398 EEANKLLN 405
EE ++L N
Sbjct: 185 EEISELQN 192
Score = 76.3 bits (186), Expect = 3e-16
Identities = 23/188 (12%), Positives = 57/188 (30%), Gaps = 4/188 (2%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
K + ++G GK+ + +LA + N +F G + D +++
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGH 67
Query: 877 TREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGAL 936
R + + + I + F + +
Sbjct: 68 QRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNT-- 125
Query: 937 DNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAI-KLLID 995
+ + ++++ + K + I + R +++ I K+L +
Sbjct: 126 -EWVDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNE 184
Query: 996 EEANKLLN 1003
EE ++L N
Sbjct: 185 EEISELQN 192
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 217
Score = 70.6 bits (172), Expect = 4e-14
Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 15/170 (8%)
Query: 20 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 79
GT++L V+ V + D ++G++ + ++ ++ + + G +G AD L
Sbjct: 8 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNS-TMLGASGDYADFQYLKQV 66
Query: 80 F--EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTAN--------RETTLIITGN 129
E+ G+ S W R M N + + +
Sbjct: 67 LGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVD 126
Query: 130 GDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDE----IIKKSLVIA 175
+ E A G G AQ + + E ++ ++++ + +
Sbjct: 127 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 176
Score = 70.6 bits (172), Expect = 4e-14
Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 15/170 (8%)
Query: 618 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 677
GT++L V+ V + D ++G++ + ++ ++ + + G +G AD L
Sbjct: 8 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNS-TMLGASGDYADFQYLKQV 66
Query: 678 F--EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTAN--------RETTLIITGN 727
E+ G+ S W R M N + + +
Sbjct: 67 LGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVD 126
Query: 728 GDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDE----IIKKSLVIA 773
+ E A G G AQ + + E ++ ++++ + +
Sbjct: 127 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 176
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 204
Score = 67.9 bits (165), Expect = 2e-13
Identities = 19/170 (11%), Positives = 55/170 (32%), Gaps = 13/170 (7%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 77
+ G +++++ N V++ D + ++ +K+ + + +AG D T+
Sbjct: 5 YNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIG-LAGLATDVQTVA 63
Query: 78 DFFEANLEKHQGNLMR-----ASVELAKEWRNDRTLRRLEAMLLTA--NRETTLIITGNG 130
+ L ++ R + + ++ + A + +T +
Sbjct: 64 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 123
Query: 131 DVLEPENGIGAIGSGGIFAQSAAKALQ-----ENTELMPDEIIKKSLVIA 175
D++ G A+ + E I ++++ A
Sbjct: 124 DLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNA 173
Score = 67.9 bits (165), Expect = 2e-13
Identities = 19/170 (11%), Positives = 55/170 (32%), Gaps = 13/170 (7%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 675
+ G +++++ N V++ D + ++ +K+ + + +AG D T+
Sbjct: 5 YNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIG-LAGLATDVQTVA 63
Query: 676 DFFEANLEKHQGNLMR-----ASVELAKEWRNDRTLRRLEAMLLTA--NRETTLIITGNG 728
+ L ++ R + + ++ + A + +T +
Sbjct: 64 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 123
Query: 729 DVLEPENGIGAIGSGGIFAQSAAKALQ-----ENTELMPDEIIKKSLVIA 773
D++ G A+ + E I ++++ A
Sbjct: 124 DLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNA 173
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 67.5 bits (164), Expect = 5e-13
Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 12/144 (8%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 77
G TIL + + L GD + I KV N ++ G AD L+
Sbjct: 7 DNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDN-IVMSANGFAADGDALV 65
Query: 78 DFFEANLEKHQGNLMRASVELAKEWRNDRTLRR----------LEAMLLTANRETTLIIT 127
F+ +++ + + + + RN + L L + + +
Sbjct: 66 KRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSF 125
Query: 128 GNGDVLEPENGIGAIGSGGIFAQS 151
E E A G+
Sbjct: 126 DPVGSYEREQCR-AGGAAASLIMP 148
Score = 67.5 bits (164), Expect = 5e-13
Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 12/144 (8%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 675
G TIL + + L GD + I KV N ++ G AD L+
Sbjct: 7 DNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDN-IVMSANGFAADGDALV 65
Query: 676 DFFEANLEKHQGNLMRASVELAKEWRNDRTLRR----------LEAMLLTANRETTLIIT 725
F+ +++ + + + + RN + L L + + +
Sbjct: 66 KRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSF 125
Query: 726 GNGDVLEPENGIGAIGSGGIFAQS 749
E E A G+
Sbjct: 126 DPVGSYEREQCR-AGGAAASLIMP 148
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 199
Score = 65.7 bits (159), Expect = 1e-12
Identities = 19/167 (11%), Positives = 47/167 (28%), Gaps = 13/167 (7%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
++ ++ + V + D V MK+ K+ K+ + +L G D ++
Sbjct: 2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEK-ILLLCVGEAGDTVQFAEYI 60
Query: 81 EANLEKHQGNLMRASVELA------------KEWRNDRTLRRLEAMLLTANRETTLIITG 128
+ N++ ++ A R + L A +
Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120
Query: 129 NGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIA 175
+ + G+ + + E+++K L
Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEEL 167
Score = 65.7 bits (159), Expect = 1e-12
Identities = 19/167 (11%), Positives = 47/167 (28%), Gaps = 13/167 (7%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
++ ++ + V + D V MK+ K+ K+ + +L G D ++
Sbjct: 2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEK-ILLLCVGEAGDTVQFAEYI 60
Query: 679 EANLEKHQGNLMRASVELA------------KEWRNDRTLRRLEAMLLTANRETTLIITG 726
+ N++ ++ A R + L A +
Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120
Query: 727 NGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIA 773
+ + G+ + + E+++K L
Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEEL 167
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 213
Score = 66.1 bits (160), Expect = 1e-12
Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 20/177 (11%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 77
F G TIL++ + + D +++ G I + K K ++ + G +G D TL
Sbjct: 7 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYK-LTDKTVIGCSGFHGDCLTLT 65
Query: 78 DFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPEN 137
EA L+ ++ + +A A L + + +
Sbjct: 66 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 125
Query: 138 GI--------GAIGSGGIFAQSAAKALQENTELMPD-----------EIIKKSLVIA 175
+ A GS Q + ++K + A
Sbjct: 126 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISA 182
Score = 66.1 bits (160), Expect = 1e-12
Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 20/177 (11%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 675
F G TIL++ + + D +++ G I + K K ++ + G +G D TL
Sbjct: 7 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYK-LTDKTVIGCSGFHGDCLTLT 65
Query: 676 DFFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPEN 735
EA L+ ++ + +A A L + + +
Sbjct: 66 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 125
Query: 736 GI--------GAIGSGGIFAQSAAKALQENTELMPD-----------EIIKKSLVIA 773
+ A GS Q + ++K + A
Sbjct: 126 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISA 182
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 204
Score = 64.4 bits (156), Expect = 4e-12
Identities = 27/209 (12%), Positives = 69/209 (33%), Gaps = 23/209 (11%)
Query: 18 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 77
G ++++ + V++ D ++ ++ + N +K+ V GI G D TL
Sbjct: 6 INGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHY--GHVFLGITGLATDVTTLN 63
Query: 78 DFFEANLEKHQGNLMRA----------SVELAKEWRNDRTLRRLEAMLLTANRETTLIIT 127
+ F ++ RA S L + + + A + + + + +
Sbjct: 64 EMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGF 123
Query: 128 GNGDVLEPENGIGAIGSGGIFAQSAAKA--LQENTELMPDEIIKKSLVIAEIVSELDKYV 185
++ G+ ++ E I ++L+ A ++ D
Sbjct: 124 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNA---ADRDALS 180
Query: 186 IGQNRAKRAVAIALRNRWRRQQITGPLQQ 214
V I ++ ++ + ++Q
Sbjct: 181 GWGAV----VYIIKKDEVVKRYL--KMRQ 203
Score = 64.4 bits (156), Expect = 4e-12
Identities = 27/209 (12%), Positives = 69/209 (33%), Gaps = 23/209 (11%)
Query: 616 FQGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLL 675
G ++++ + V++ D ++ ++ + N +K+ V GI G D TL
Sbjct: 6 INGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHY--GHVFLGITGLATDVTTLN 63
Query: 676 DFFEANLEKHQGNLMRA----------SVELAKEWRNDRTLRRLEAMLLTANRETTLIIT 725
+ F ++ RA S L + + + A + + + + +
Sbjct: 64 EMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGF 123
Query: 726 GNGDVLEPENGIGAIGSGGIFAQSAAKA--LQENTELMPDEIIKKSLVIAEIVSELDKYV 783
++ G+ ++ E I ++L+ A ++ D
Sbjct: 124 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNA---ADRDALS 180
Query: 784 IGQNRAKRAVAIALRNRWRRQQITGPLQQ 812
V I ++ ++ + ++Q
Sbjct: 181 GWGAV----VYIIKKDEVVKRYL--KMRQ 203
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 202
Score = 63.2 bits (153), Expect = 1e-11
Identities = 41/199 (20%), Positives = 67/199 (33%), Gaps = 17/199 (8%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI++V+ V LG D + T G+ I K+ ++ + +GS AD + D
Sbjct: 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDR-IFCCRSGSAADTQAVADAV 59
Query: 81 EANLEKHQGNLMR-ASVELAKEWRNDRTLRR---LEAMLLTA---NRETTLIITGNGDVL 133
L H L V A + R L A ++ A +E + + +
Sbjct: 60 TYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGM 119
Query: 134 EPENGIGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIAEIVSELDKYVIGQNRA 191
GSG + A + + +L +A E D G R
Sbjct: 120 MVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALA---MERDGSSGGVIR- 175
Query: 192 KRAVAIALRNRWRRQQITG 210
+A + RQ + G
Sbjct: 176 ---LAAIAESGVERQVLLG 191
Score = 63.2 bits (153), Expect = 1e-11
Identities = 41/199 (20%), Positives = 67/199 (33%), Gaps = 17/199 (8%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI++V+ V LG D + T G+ I K+ ++ + +GS AD + D
Sbjct: 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDR-IFCCRSGSAADTQAVADAV 59
Query: 679 EANLEKHQGNLMR-ASVELAKEWRNDRTLRR---LEAMLLTA---NRETTLIITGNGDVL 731
L H L V A + R L A ++ A +E + + +
Sbjct: 60 TYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGM 119
Query: 732 EPENGIGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIAEIVSELDKYVIGQNRA 789
GSG + A + + +L +A E D G R
Sbjct: 120 MVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALA---MERDGSSGGVIR- 175
Query: 790 KRAVAIALRNRWRRQQITG 808
+A + RQ + G
Sbjct: 176 ---LAAIAESGVERQVLLG 191
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 205
Score = 62.8 bits (152), Expect = 1e-11
Identities = 38/201 (18%), Positives = 61/201 (30%), Gaps = 18/201 (8%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
G +I++V + V LG D + T G I K+ +++ + +GS AD + D
Sbjct: 8 LGASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDK-IWCCRSGSAADTQAIAD 66
Query: 79 FFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENG 138
+ +LE + S E A + + L G+V G
Sbjct: 67 IVQYHLELYTSQYGTPSTETAASVFKELCYENKD-NLTAGIIVAGYDDKNKGEVYTIPLG 125
Query: 139 -------IGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIAEIVSELDKYVIGQN 189
GSG F + + IK SL A + D G
Sbjct: 126 GSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQA---IKWDGSSGGVI 182
Query: 190 RAKRAVAIALRNRWRRQQITG 210
R + + R
Sbjct: 183 R----MVVLTAAGVERLIFYP 199
Score = 62.8 bits (152), Expect = 1e-11
Identities = 38/201 (18%), Positives = 61/201 (30%), Gaps = 18/201 (8%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
G +I++V + V LG D + T G I K+ +++ + +GS AD + D
Sbjct: 8 LGASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDK-IWCCRSGSAADTQAIAD 66
Query: 677 FFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENG 736
+ +LE + S E A + + L G+V G
Sbjct: 67 IVQYHLELYTSQYGTPSTETAASVFKELCYENKD-NLTAGIIVAGYDDKNKGEVYTIPLG 125
Query: 737 -------IGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIAEIVSELDKYVIGQN 787
GSG F + + IK SL A + D G
Sbjct: 126 GSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQA---IKWDGSSGGVI 182
Query: 788 RAKRAVAIALRNRWRRQQITG 808
R + + R
Sbjct: 183 R----MVVLTAAGVERLIFYP 199
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 62.8 bits (152), Expect = 2e-11
Identities = 24/179 (13%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 20 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 79
GT+++S++ N V + D ++G+++ N +++ + N + GI+G +D +
Sbjct: 8 GTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDN-TVVGISGDISDMQHIERL 66
Query: 80 FEANLEKHQGNLMRASVE-------LAKEWRN---------DRTLRRLEAMLLTANRETT 123
+ + ++ + A E + + + + + +N +
Sbjct: 67 LKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQF 126
Query: 124 LIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPD-------EIIKKSLVIA 175
L V + G G A + + + +P E I ++ +
Sbjct: 127 LRYVNLLGVTYSSPTLA-TGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVL 184
Score = 62.8 bits (152), Expect = 2e-11
Identities = 24/179 (13%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 618 GTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDF 677
GT+++S++ N V + D ++G+++ N +++ + N + GI+G +D +
Sbjct: 8 GTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDN-TVVGISGDISDMQHIERL 66
Query: 678 FEANLEKHQGNLMRASVE-------LAKEWRN---------DRTLRRLEAMLLTANRETT 721
+ + ++ + A E + + + + + +N +
Sbjct: 67 LKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQF 126
Query: 722 LIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPD-------EIIKKSLVIA 773
L V + G G A + + + +P E I ++ +
Sbjct: 127 LRYVNLLGVTYSSPTLA-TGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVL 184
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 315
Score = 64.1 bits (155), Expect = 2e-11
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 174 IAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPK-NILMIGPTGVGKT 232
+ + L V GQ++A A+ A++ L E P + L GPTGVGKT
Sbjct: 13 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAG------LGHEHKPVGSFLFAGPTGVGKT 66
Query: 233 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDT 266
E+ +L+K ++ + +++ E V R +
Sbjct: 67 EVTVQLSKALGIELLRFDMSEYMERHTVSRLIGA 100
Score = 64.1 bits (155), Expect = 2e-11
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 772 IAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPK-NILMIGPTGVGKT 830
+ + L V GQ++A A+ A++ L E P + L GPTGVGKT
Sbjct: 13 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAG------LGHEHKPVGSFLFAGPTGVGKT 66
Query: 831 EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDT 864
E+ +L+K ++ + +++ E V R +
Sbjct: 67 EVTVQLSKALGIELLRFDMSEYMERHTVSRLIGA 100
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 224
Score = 62.2 bits (150), Expect = 4e-11
Identities = 45/208 (21%), Positives = 71/208 (34%), Gaps = 27/208 (12%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+++ V L GD + T GN+I +KV + AGIAG+ A L+ F
Sbjct: 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEY-SAAGIAGTAGIAIELVRLF 59
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTL--------RRLEAMLLTANRETT--------- 123
LE ++ K R + + L + L +
Sbjct: 60 AVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGR 119
Query: 124 -LIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIAEIVSE 180
+ G E G A+GSG +FA+SA K + E +SL A ++
Sbjct: 120 IVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDA---AD 176
Query: 181 LDKYVIGQNRAKR---AVAIALRNRWRR 205
D G + + +
Sbjct: 177 DDSATGGPDLTRGIYPTAVTITQAGAVH 204
Score = 62.2 bits (150), Expect = 4e-11
Identities = 45/208 (21%), Positives = 71/208 (34%), Gaps = 27/208 (12%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+++ V L GD + T GN+I +KV + AGIAG+ A L+ F
Sbjct: 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEY-SAAGIAGTAGIAIELVRLF 59
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTL--------RRLEAMLLTANRETT--------- 721
LE ++ K R + + L + L +
Sbjct: 60 AVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGR 119
Query: 722 -LIITGNGDVLEPENGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIAEIVSE 778
+ G E G A+GSG +FA+SA K + E +SL A ++
Sbjct: 120 IVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDA---AD 176
Query: 779 LDKYVIGQNRAKR---AVAIALRNRWRR 803
D G + + +
Sbjct: 177 DDSATGGPDLTRGIYPTAVTITQAGAVH 204
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 56.3 bits (135), Expect = 3e-09
Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 9/160 (5%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI+ V+ N V + D + T G ++ + K+ ++ + AG+ AD +
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPK-IWCAGAGTAADTEAVTQLI 59
Query: 81 EANLEKHQGNLMR--ASVELAKEWRN--DRTLRRLEAMLLTA--NRETTLIITGNGDVLE 134
+N+E H R V + + + + A L+ A + + + + +
Sbjct: 60 GSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGST 119
Query: 135 PENGIGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSL 172
++GSG + A + ++ + + ++ ++
Sbjct: 120 DVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAI 159
Score = 56.3 bits (135), Expect = 3e-09
Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 9/160 (5%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI+ V+ N V + D + T G ++ + K+ ++ + AG+ AD +
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPK-IWCAGAGTAADTEAVTQLI 59
Query: 679 EANLEKHQGNLMR--ASVELAKEWRN--DRTLRRLEAMLLTA--NRETTLIITGNGDVLE 732
+N+E H R V + + + + A L+ A + + + + +
Sbjct: 60 GSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGST 119
Query: 733 PENGIGAIGSGGIFAQSAAKALQENTELMPD--EIIKKSL 770
++GSG + A + ++ + + ++ ++
Sbjct: 120 DVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAI 159
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic)
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 203
Score = 52.1 bits (124), Expect = 7e-08
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 9/163 (5%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TT + + + V + + +VT N IM + KK+ ++ IAG DA L+ +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTY-TGMTIAGLVGDAQVLVRYM 59
Query: 81 EAN-----LEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEP 135
+A L++ + A L N LL +T +
Sbjct: 60 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGS 119
Query: 136 -ENGIGAIGSGGIFAQSAAKAL--QENTELMPDEIIKKSLVIA 175
E+ + GSG F ++ ++ T +++ +++ A
Sbjct: 120 VEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAA 162
Score = 52.1 bits (124), Expect = 7e-08
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 9/163 (5%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TT + + + V + + +VT N IM + KK+ ++ IAG DA L+ +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTY-TGMTIAGLVGDAQVLVRYM 59
Query: 679 EAN-----LEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEP 733
+A L++ + A L N LL +T +
Sbjct: 60 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGS 119
Query: 734 -ENGIGAIGSGGIFAQSAAKAL--QENTELMPDEIIKKSLVIA 773
E+ + GSG F ++ ++ T +++ +++ A
Sbjct: 120 VEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAA 162
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 201
Score = 50.9 bits (121), Expect = 1e-07
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 15/187 (8%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TT L+ + + V + D + T G I + KKV ++ +L +AG AD
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWERLL 59
Query: 81 EANLEKHQ-GNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI 139
++ N R SV A + + + L G G G
Sbjct: 60 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 119
Query: 140 ------GAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIA---EIVS--ELDKYVI 186
++GSG ++A ++ ++++ A + S ++ Y +
Sbjct: 120 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 179
Query: 187 GQNRAKR 193
++ R
Sbjct: 180 REDGWIR 186
Score = 50.9 bits (121), Expect = 1e-07
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 15/187 (8%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TT L+ + + V + D + T G I + KKV ++ +L +AG AD
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWERLL 59
Query: 679 EANLEKHQ-GNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI 737
++ N R SV A + + + L G G G
Sbjct: 60 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 119
Query: 738 ------GAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIA---EIVS--ELDKYVI 784
++GSG ++A ++ ++++ A + S ++ Y +
Sbjct: 120 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 179
Query: 785 GQNRAKR 791
++ R
Sbjct: 180 REDGWIR 186
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Thermus thermophilus [TaxId: 274]}
Length = 247
Score = 50.2 bits (120), Expect = 4e-07
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 185 VIGQNRAKRA---VAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKL 241
V G AK + L+N R ++ + PK +L++GP GVGKT +AR +A
Sbjct: 11 VAGAEEAKEELKEIVEFLKNPSRFHEMGARI-----PKGVLLVGPPGVGKTHLARAVAGE 65
Query: 242 SNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
+ PFI + F E +VG +RDL +
Sbjct: 66 ARVPFITASGSDFVE-MFVG-VGAARVRDLFE 95
Score = 50.2 bits (120), Expect = 4e-07
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 783 VIGQNRAKRA---VAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKL 839
V G AK + L+N R ++ + PK +L++GP GVGKT +AR +A
Sbjct: 11 VAGAEEAKEELKEIVEFLKNPSRFHEMGARI-----PKGVLLVGPPGVGKTHLARAVAGE 65
Query: 840 SNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+ PFI + F E +VG +RDL +
Sbjct: 66 ARVPFITASGSDFVE-MFVG-VGAARVRDLFE 95
Score = 35.6 bits (82), Expect = 0.024
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Query: 422 IIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGA 480
I+F+DEID + R S + R LL ++ G K I+ +A+
Sbjct: 104 IVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMD--------GFEKDTAIVVMAATN 155
Query: 481 FHLAKPSDLIPEL--QGRFPIRVELDSLSISDFTRIM 515
P L P L GRF ++ +D+ + +I+
Sbjct: 156 R----PDILDPALLRPGRFDRQIAIDAPDVKGREQIL 188
Score = 35.6 bits (82), Expect = 0.024
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Query: 1020 IIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGA 1078
I+F+DEID + R S + R LL ++ G K I+ +A+
Sbjct: 104 IVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMD--------GFEKDTAIVVMAATN 155
Query: 1079 FHLAKPSDLIPEL--QGRFPIRVELDSLSISDFTRIM 1113
P L P L GRF ++ +D+ + +I+
Sbjct: 156 R----PDILDPALLRPGRFDRQIAIDAPDVKGREQIL 188
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 220
Score = 49.4 bits (117), Expect = 6e-07
Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TTI V + + LG D + T G V+ + K+ + N + AG+ AD
Sbjct: 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPN-IYCCGAGTAADTDMTTQLI 59
Query: 81 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI- 139
+NLE H + R + + L R + A + +TG +G
Sbjct: 60 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYRGYIGAALVLGGVDVTGPHLYSIYPHGST 119
Query: 140 -----GAIGSGGIFAQSAAKAL--QENTELMPDEIIKKSL 172
+GSG + A + + + E ++ +++
Sbjct: 120 DKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAI 159
Score = 49.4 bits (117), Expect = 6e-07
Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TTI V + + LG D + T G V+ + K+ + N + AG+ AD
Sbjct: 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPN-IYCCGAGTAADTDMTTQLI 59
Query: 679 EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI- 737
+NLE H + R + + L R + A + +TG +G
Sbjct: 60 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYRGYIGAALVLGGVDVTGPHLYSIYPHGST 119
Query: 738 -----GAIGSGGIFAQSAAKAL--QENTELMPDEIIKKSL 770
+GSG + A + + + E ++ +++
Sbjct: 120 DKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAI 159
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 202
Score = 48.6 bits (115), Expect = 9e-07
Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 12/173 (6%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TT + + + V + + + T GN I +AKK+ ++ + AGS DA L
Sbjct: 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADR-MAMTTAGSVGDAQFLARII 59
Query: 81 EANLEKHQGNLMR-----ASVELAKEWRNDRTLRRLEAMLLTA----NRETTLIITGNGD 131
+ ++ R A L N LL ++ I G
Sbjct: 60 KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGG 119
Query: 132 VLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 184
+E ++ I A GSG + A + + E+ DE ++ ++ + D
Sbjct: 120 AIEEKD-IVATGSGSLTAYGVLED-RFTPEIGVDEAVELAVRAIYSAMKRDSA 170
Score = 48.6 bits (115), Expect = 9e-07
Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 12/173 (6%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TT + + + V + + + T GN I +AKK+ ++ + AGS DA L
Sbjct: 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADR-MAMTTAGSVGDAQFLARII 59
Query: 679 EANLEKHQGNLMR-----ASVELAKEWRNDRTLRRLEAMLLTA----NRETTLIITGNGD 729
+ ++ R A L N LL ++ I G
Sbjct: 60 KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGG 119
Query: 730 VLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKY 782
+E ++ I A GSG + A + + E+ DE ++ ++ + D
Sbjct: 120 AIEEKD-IVATGSGSLTAYGVLED-RFTPEIGVDEAVELAVRAIYSAMKRDSA 170
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 212
Score = 47.8 bits (113), Expect = 2e-06
Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 13/166 (7%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
TT L+ R + + D + T GN + + K+V ++ +L +AG AD +
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPF-LLGTMAGGAADCQFWETWL 59
Query: 81 EANLEKHQGNL-MRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI 139
+ H+ R SV A + ++ + A L G + +
Sbjct: 60 GSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGT-MICGYTRKEGPTIYYVDSD 118
Query: 140 G--------AIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIA 175
G +GSG FA + + + D + K+S++ A
Sbjct: 119 GTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAA 164
Score = 47.8 bits (113), Expect = 2e-06
Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 13/166 (7%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
TT L+ R + + D + T GN + + K+V ++ +L +AG AD +
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPF-LLGTMAGGAADCQFWETWL 59
Query: 679 EANLEKHQGNL-MRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENGI 737
+ H+ R SV A + ++ + A L G + +
Sbjct: 60 GSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGT-MICGYTRKEGPTIYYVDSD 118
Query: 738 G--------AIGSGGIFAQSAAKALQENTELMPD--EIIKKSLVIA 773
G +GSG FA + + + D + K+S++ A
Sbjct: 119 GTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAA 164
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 47.9 bits (114), Expect = 3e-06
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 185 VIGQNRAKRAVA---IALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKL 241
V G + AK VA LR R Q++ G + PK +LM+GP G GKT +A+ +A
Sbjct: 14 VAGCDEAKEEVAELVEYLREPSRFQKLGGKI-----PKGVLMVGPPGTGKTLLAKAIAGE 68
Query: 242 SNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
+ PF I + F E +VG + +RD+ +
Sbjct: 69 AKVPFFTISGSDFVE-MFVG-VGASRVRDMFE 98
Score = 47.9 bits (114), Expect = 3e-06
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 783 VIGQNRAKRAVA---IALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKL 839
V G + AK VA LR R Q++ G + PK +LM+GP G GKT +A+ +A
Sbjct: 14 VAGCDEAKEEVAELVEYLREPSRFQKLGGKI-----PKGVLMVGPPGTGKTLLAKAIAGE 68
Query: 840 SNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+ PF I + F E +VG + +RD+ +
Sbjct: 69 AKVPFFTISGSDFVE-MFVG-VGASRVRDMFE 98
Score = 34.0 bits (78), Expect = 0.070
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 422 IIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGA 480
IIF+DEID + R + R +L ++ G + I+ IA+
Sbjct: 107 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMD--------GFEGNEGIIVIAAT- 157
Query: 481 FHLAKPSDLIPEL--QGRFPIRVELDSLSISDFTRIM 515
+P L P L GRF +V + + +I+
Sbjct: 158 ---NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQIL 191
Score = 34.0 bits (78), Expect = 0.070
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 1020 IIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGA 1078
IIF+DEID + R + R +L ++ G + I+ IA+
Sbjct: 107 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMD--------GFEGNEGIIVIAAT- 157
Query: 1079 FHLAKPSDLIPEL--QGRFPIRVELDSLSISDFTRIM 1113
+P L P L GRF +V + + +I+
Sbjct: 158 ---NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQIL 191
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 198
Score = 46.3 bits (109), Expect = 5e-06
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 21 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 80
IL +R + V L VT G ++K+S K R+L + L AG D ++
Sbjct: 2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPH-TLMSFAGEAGDTVQFAEYI 60
Query: 81 EANLEKHQGNLMR-------ASVELAKEWRNDRTLRRLEAMLLTA----NRETTLIITGN 129
+AN++ + +S + ++ R+ R + +L + + +
Sbjct: 61 QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID 120
Query: 130 GDVLEPENGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIA 175
+ E GA G G + S T +++K +
Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQEL 168
Score = 46.3 bits (109), Expect = 5e-06
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 619 TTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLDFF 678
IL +R + V L VT G ++K+S K R+L + L AG D ++
Sbjct: 2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPH-TLMSFAGEAGDTVQFAEYI 60
Query: 679 EANLEKHQGNLMR-------ASVELAKEWRNDRTLRRLEAMLLTA----NRETTLIITGN 727
+AN++ + +S + ++ R+ R + +L + + +
Sbjct: 61 QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID 120
Query: 728 GDVLEPENGIGAIGSGGIFAQSAAKALQEN--TELMPDEIIKKSLVIA 773
+ E GA G G + S T +++K +
Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQEL 168
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 315
Score = 47.4 bits (112), Expect = 6e-06
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 174 IAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 233
+ + EL K V+GQ+ A RAVA A+R R R G + L +GPTGVGKTE
Sbjct: 14 LLRLEEELHKRVVGQDEAIRAVADAIR-RAR----AGLKDPNRPIGSFLFLGPTGVGKTE 68
Query: 234 IARRLAKL---SNAPFIKIEATKFTEV-----------GYVGRDVDTIIRDLI 272
+A+ LA + I+I+ T++ E GYVG + + + +
Sbjct: 69 LAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAV 121
Score = 47.4 bits (112), Expect = 6e-06
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 772 IAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 831
+ + EL K V+GQ+ A RAVA A+R R R G + L +GPTGVGKTE
Sbjct: 14 LLRLEEELHKRVVGQDEAIRAVADAIR-RAR----AGLKDPNRPIGSFLFLGPTGVGKTE 68
Query: 832 IARRLAKL---SNAPFIKIEATKFTEV-----------GYVGRDVDTIIRDLI 870
+A+ LA + I+I+ T++ E GYVG + + + +
Sbjct: 69 LAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAV 121
Score = 36.6 bits (84), Expect = 0.015
Identities = 37/172 (21%), Positives = 52/172 (30%), Gaps = 29/172 (16%)
Query: 419 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHIL---F 475
+I DEI+K N I G D G TV+ + +I L
Sbjct: 125 PYSVILFDEIEKA-HPDVFNILLQILDDGRLTD----SHGRTVDFRNTVIILTSNLGSPL 179
Query: 476 IASGAFHLAKPSDL------------IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLT 523
I G + PE R V L+ +I+
Sbjct: 180 ILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVE----IQL 235
Query: 524 KQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLE 575
A LA + I +E + LAE Y GAR L +++ LE
Sbjct: 236 SYLRARLAEKRISLELTEAAKDFLAERGY-----DPVFGARPLRRVIQRELE 282
Score = 30.8 bits (69), Expect = 0.97
Identities = 31/149 (20%), Positives = 43/149 (28%), Gaps = 24/149 (16%)
Query: 1017 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHIL---F 1073
+I DEI+K N I G D G TV+ + +I L
Sbjct: 125 PYSVILFDEIEKA-HPDVFNILLQILDDGRLTD----SHGRTVDFRNTVIILTSNLGSPL 179
Query: 1074 IASGAFHLAKPSDL------------IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLT 1121
I G + PE R V L+ +I+
Sbjct: 180 ILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVE----IQL 235
Query: 1122 KQYEALLATEGIKIEFVDDGIQRLAEIAY 1150
A LA + I +E + LAE Y
Sbjct: 236 SYLRARLAEKRISLELTEAAKDFLAERGY 264
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 47.2 bits (111), Expect = 6e-06
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 15/71 (21%)
Query: 185 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 244
++GQ K A+ + + +L+ G G GK+ R LA L
Sbjct: 9 IVGQEDMKLALLLTAVDPGIG--------------GVLVFGDRGTGKSTAVRALAALLP- 53
Query: 245 PFIKIEATKFT 255
+E +
Sbjct: 54 EIEAVEGCPVS 64
Score = 47.2 bits (111), Expect = 6e-06
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 15/71 (21%)
Query: 783 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 842
++GQ K A+ + + +L+ G G GK+ R LA L
Sbjct: 9 IVGQEDMKLALLLTAVDPGIG--------------GVLVFGDRGTGKSTAVRALAALLP- 53
Query: 843 PFIKIEATKFT 853
+E +
Sbjct: 54 EIEAVEGCPVS 64
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 46.5 bits (109), Expect = 7e-06
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 185 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 244
IGQ R K+ + + L R++ +++L+ GP G+GKT +A +A
Sbjct: 11 YIGQERLKQKLRVYLEAAKARKEP---------LEHLLLFGPPGLGKTTLAHVIAHELGV 61
Query: 245 PFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILV 304
+ G + + + + + I + + A ED V+DI++
Sbjct: 62 NLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRL-SRQAEEHLYPAMEDFVMDIVI 120
Score = 46.5 bits (109), Expect = 7e-06
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 783 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 842
IGQ R K+ + + L R++ +++L+ GP G+GKT +A +A
Sbjct: 11 YIGQERLKQKLRVYLEAAKARKEP---------LEHLLLFGPPGLGKTTLAHVIAHELGV 61
Query: 843 PFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILV 902
+ G + + + + + I + + A ED V+DI++
Sbjct: 62 NLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRL-SRQAEEHLYPAMEDFVMDIVI 120
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 46.1 bits (108), Expect = 1e-05
Identities = 26/240 (10%), Positives = 75/240 (31%), Gaps = 4/240 (1%)
Query: 206 QQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVD 265
+++ + +P L+ G G GKT + + + + I I+ F + ++
Sbjct: 20 EELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELV 79
Query: 266 TIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNIST 325
+ + + + +R D + VI+ + + +
Sbjct: 80 KLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETK 139
Query: 326 RQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQI--KTMFSVIGNHRKKT 383
+ L E + P +P ++ + + ++
Sbjct: 140 MYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSD 199
Query: 384 RKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDI 443
++ RE +KL E + ++ ++++ V +++I + N + +
Sbjct: 200 IRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKE--IQPTLERIEQKMVLNKHQET 257
Score = 46.1 bits (108), Expect = 1e-05
Identities = 26/240 (10%), Positives = 75/240 (31%), Gaps = 4/240 (1%)
Query: 804 QQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVD 863
+++ + +P L+ G G GKT + + + + I I+ F + ++
Sbjct: 20 EELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELV 79
Query: 864 TIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNIST 923
+ + + + +R D + VI+ + + +
Sbjct: 80 KLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETK 139
Query: 924 RQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQI--KTMFSVIGNHRKKT 981
+ L E + P +P ++ + + ++
Sbjct: 140 MYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSD 199
Query: 982 RKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDI 1041
++ RE +KL E + ++ ++++ V +++I + N + +
Sbjct: 200 IRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKE--IQPTLERIEQKMVLNKHQET 257
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 45.0 bits (105), Expect = 1e-05
Identities = 12/80 (15%), Positives = 22/80 (27%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISI 276
T + I++ G + GK+ I R L + P++ E + +
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGG 61
Query: 277 KQTREFEINKVRTRAEDAAE 296
AE
Sbjct: 62 VSIGPEFRALEGAWAEGVVA 81
Score = 45.0 bits (105), Expect = 1e-05
Identities = 12/80 (15%), Positives = 22/80 (27%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISI 874
T + I++ G + GK+ I R L + P++ E + +
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGG 61
Query: 875 KQTREFEINKVRTRAEDAAE 894
AE
Sbjct: 62 VSIGPEFRALEGAWAEGVVA 81
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 43.5 bits (102), Expect = 1e-04
Identities = 31/271 (11%), Positives = 71/271 (26%), Gaps = 27/271 (9%)
Query: 148 FAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQ- 206
A +N + + K VS + + R + L
Sbjct: 51 VESGDAIVFDKNAQRIVAYKEKSVKAEDGSVSVVQVENGFMKQGHRGWLVDLTGELVGCS 110
Query: 207 -QITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA--PFIKIEATKFTEVGYVGRD 263
+ +++ G GKT + L + + + + GY D
Sbjct: 111 PVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLS-GYNT-D 168
Query: 264 VDTIIRDLIDISIKQTREF--EINKV----RTRAEDAAEDRVIDILVPSKEKSNLDTDF- 316
+ + D+ ++ + V R L+
Sbjct: 169 FNVFVDDIARAMLQHRVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCV 228
Query: 317 ----NNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS--PPGMEEMTAQIK 370
N +N I + + D ++++ G++ +T ++
Sbjct: 229 VIASLNPTSNDDK--IVELVKEASRSN-STSLVISTDVDGEWQVLTRTGEGLQRLTHTLQ 285
Query: 371 TMFS-----VIGNHRKKTRKIKIREAIKLLI 396
T + I ++ K +AI+ +I
Sbjct: 286 TSYGEHSVLTIHTSKQSGGKQASGKAIQTVI 316
Score = 43.5 bits (102), Expect = 1e-04
Identities = 31/271 (11%), Positives = 71/271 (26%), Gaps = 27/271 (9%)
Query: 746 FAQSAAKALQENTELMPDEIIKKSLVIAEIVSELDKYVIGQNRAKRAVAIALRNRWRRQ- 804
A +N + + K VS + + R + L
Sbjct: 51 VESGDAIVFDKNAQRIVAYKEKSVKAEDGSVSVVQVENGFMKQGHRGWLVDLTGELVGCS 110
Query: 805 -QITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA--PFIKIEATKFTEVGYVGRD 861
+ +++ G GKT + L + + + + GY D
Sbjct: 111 PVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLS-GYNT-D 168
Query: 862 VDTIIRDLIDISIKQTREF--EINKV----RTRAEDAAEDRVIDILVPSKEKSNLDTDF- 914
+ + D+ ++ + V R L+
Sbjct: 169 FNVFVDDIARAMLQHRVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCV 228
Query: 915 ----NNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS--PPGMEEMTAQIK 968
N +N I + + D ++++ G++ +T ++
Sbjct: 229 VIASLNPTSNDDK--IVELVKEASRSN-STSLVISTDVDGEWQVLTRTGEGLQRLTHTLQ 285
Query: 969 TMFS-----VIGNHRKKTRKIKIREAIKLLI 994
T + I ++ K +AI+ +I
Sbjct: 286 TSYGEHSVLTIHTSKQSGGKQASGKAIQTVI 316
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 42.0 bits (97), Expect = 1e-04
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRD 263
+NI ++GP G GK+ I R+LA+ N F + G
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGW 47
Score = 42.0 bits (97), Expect = 1e-04
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRD 861
+NI ++GP G GK+ I R+LA+ N F + G
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGW 47
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 41.4 bits (96), Expect = 1e-04
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFI 247
KNI+ IG G GK+ +AR LAK + F+
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDLDLVFL 29
Score = 41.4 bits (96), Expect = 1e-04
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFI 845
KNI+ IG G GK+ +AR LAK + F+
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDLDLVFL 29
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 40.7 bits (94), Expect = 3e-04
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 254
+ I M+G G G T + R LA+ F+ +
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQ 38
Score = 40.7 bits (94), Expect = 3e-04
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 852
+ I M+G G G T + R LA+ F+ +
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQ 38
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 40.4 bits (93), Expect = 3e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 250
+++G G GK+ I RRLAK + +
Sbjct: 2 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33
Score = 40.4 bits (93), Expect = 3e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIE 848
+++G G GK+ I RRLAK + +
Sbjct: 2 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 41.3 bits (95), Expect = 4e-04
Identities = 26/257 (10%), Positives = 63/257 (24%), Gaps = 16/257 (6%)
Query: 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIAR----RL 238
K + + + + + I L N R ++G G GKT R
Sbjct: 16 KRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELY 67
Query: 239 AKLSNAPFIKIEATKFTE--VGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 296
+ A F+ I + I + + + +
Sbjct: 68 KDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMF 127
Query: 297 DRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEI 356
+ D + + + E + + +I + ++ I
Sbjct: 128 LVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVI 187
Query: 357 MSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN 416
P ++ I + G + ++ + + D + AI+
Sbjct: 188 RFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGD--ARLAIDI 245
Query: 417 VEQNGIIFLDEIDKITT 433
+ ++ K
Sbjct: 246 LYRSAYAAQQNGRKHIA 262
Score = 41.3 bits (95), Expect = 4e-04
Identities = 26/257 (10%), Positives = 63/257 (24%), Gaps = 16/257 (6%)
Query: 781 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIAR----RL 836
K + + + + + I L N R ++G G GKT R
Sbjct: 16 KRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELY 67
Query: 837 AKLSNAPFIKIEATKFTE--VGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAE 894
+ A F+ I + I + + + +
Sbjct: 68 KDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMF 127
Query: 895 DRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEI 954
+ D + + + E + + +I + ++ I
Sbjct: 128 LVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVI 187
Query: 955 MSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN 1014
P ++ I + G + ++ + + D + AI+
Sbjct: 188 RFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGD--ARLAIDI 245
Query: 1015 VEQNGIIFLDEIDKITT 1031
+ ++ K
Sbjct: 246 LYRSAYAAQQNGRKHIA 262
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 40.5 bits (93), Expect = 8e-04
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 214 QEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
+ + L++G GK+ I + N P+I ++ KF E Y+ + +L
Sbjct: 25 KGLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYI--SYKDFLLELQK 82
Query: 274 ISIKQTREFE 283
K +
Sbjct: 83 EINKLVKRLP 92
Score = 40.5 bits (93), Expect = 8e-04
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 812 QEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+ + L++G GK+ I + N P+I ++ KF E Y+ + +L
Sbjct: 25 KGLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYI--SYKDFLLELQK 82
Query: 872 ISIKQTREFE 881
K +
Sbjct: 83 EINKLVKRLP 92
Score = 28.2 bits (61), Expect = 6.2
Identities = 6/44 (13%), Positives = 12/44 (27%)
Query: 487 SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALL 530
IP F + + + + K++E L
Sbjct: 238 IGGIPGWLTYFGFIYLDNKNLDFAINQTLEYAKKLILKEFENFL 281
Score = 28.2 bits (61), Expect = 6.2
Identities = 6/44 (13%), Positives = 12/44 (27%)
Query: 1085 SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALL 1128
IP F + + + + K++E L
Sbjct: 238 IGGIPGWLTYFGFIYLDNKNLDFAINQTLEYAKKLILKEFENFL 281
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 40.3 bits (93), Expect = 8e-04
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 185 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 244
IGQ K+ +++AL R ++ ++L+ GP G+GKT +A +A
Sbjct: 11 FIGQENVKKKLSLALEAAKMRGEV---------LDHVLLAGPPGLGKTTLAHIIASELQT 61
Query: 245 PFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILV 304
+ G + + T + + I + V A ED IDI++
Sbjct: 62 NIHVTSGPVLVKQGDM-AAILTSLERGDVLFIDEIHRLN-KAVEELLYSAIEDFQIDIMI 119
Score = 40.3 bits (93), Expect = 8e-04
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 783 VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNA 842
IGQ K+ +++AL R ++ ++L+ GP G+GKT +A +A
Sbjct: 11 FIGQENVKKKLSLALEAAKMRGEV---------LDHVLLAGPPGLGKTTLAHIIASELQT 61
Query: 843 PFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILV 902
+ G + + T + + I + V A ED IDI++
Sbjct: 62 NIHVTSGPVLVKQGDM-AAILTSLERGDVLFIDEIHRLN-KAVEELLYSAIEDFQIDIMI 119
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 40.0 bits (93), Expect = 0.001
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
+ L GP GKT +A L +L + + +G +D + +
Sbjct: 154 KRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQ-FLVVFE 208
Score = 40.0 bits (93), Expect = 0.001
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+ L GP GKT +A L +L + + +G +D + +
Sbjct: 154 KRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQ-FLVVFE 208
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 38.4 bits (88), Expect = 0.002
Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 1/143 (0%)
Query: 214 QEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
++ NIL+ G G GKT +A +A + E + + +I+
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIE 60
Query: 274 ISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRL 333
+ + + + D L P + ++ + + R R+
Sbjct: 61 EKDEDRLLDFMEPIMVSRGNHVVDYHSSELFP-ERWFHMVVVLHTSTEVLFERLTKRQYS 119
Query: 334 REGALDNKEIEIELNDTGPHMEI 356
+N E EI+ +
Sbjct: 120 EAKRAENMEAEIQCICEEEARDA 142
Score = 38.4 bits (88), Expect = 0.002
Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 1/143 (0%)
Query: 812 QEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
++ NIL+ G G GKT +A +A + E + + +I+
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIE 60
Query: 872 ISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRL 931
+ + + + D L P + ++ + + R R+
Sbjct: 61 EKDEDRLLDFMEPIMVSRGNHVVDYHSSELFP-ERWFHMVVVLHTSTEVLFERLTKRQYS 119
Query: 932 REGALDNKEIEIELNDTGPHMEI 954
+N E EI+ +
Sbjct: 120 EAKRAENMEAEIQCICEEEARDA 142
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 38.4 bits (88), Expect = 0.002
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 215 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 256
++ +L+ G G GK+ IA LA L P + +
Sbjct: 1 DLGGNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWG 42
Score = 38.4 bits (88), Expect = 0.002
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 813 EITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 854
++ +L+ G G GK+ IA LA L P + +
Sbjct: 1 DLGGNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWG 42
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 37.6 bits (86), Expect = 0.003
Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 6/137 (4%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
NIL+ G GVGKT + + LA S +I + E Y G D + + +
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYD-----EEYDCPILDED 60
Query: 280 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALD 339
R + + R D P + ++ + N + R R + D
Sbjct: 61 RVVDELDNQMREGGVIVDYHGCDFFP-ERWFHIVFVLRTDTNVLYERLETRGYNEKKLTD 119
Query: 340 NKEIEIELNDTGPHMEI 356
N + EI
Sbjct: 120 NIQCEIFQVLYEEATAS 136
Score = 37.6 bits (86), Expect = 0.003
Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 6/137 (4%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
NIL+ G GVGKT + + LA S +I + E Y G D + + +
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYD-----EEYDCPILDED 60
Query: 878 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALD 937
R + + R D P + ++ + N + R R + D
Sbjct: 61 RVVDELDNQMREGGVIVDYHGCDFFP-ERWFHIVFVLRTDTNVLYERLETRGYNEKKLTD 119
Query: 938 NKEIEIELNDTGPHMEI 954
N + EI
Sbjct: 120 NIQCEIFQVLYEEATAS 136
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 37.8 bits (87), Expect = 0.004
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
T + + + + L + +VT + S +K+ KL +A +AG TADA L++
Sbjct: 30 HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVA-VAGLTADAEILIN 88
Query: 79 FF--EANLEKHQGNLMRASVELAKEWRN 104
A N L + +
Sbjct: 89 TARIHAQNYLKTYNEDIPVEILVRRLSD 116
Score = 37.8 bits (87), Expect = 0.004
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
T + + + + L + +VT + S +K+ KL +A +AG TADA L++
Sbjct: 30 HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVA-VAGLTADAEILIN 88
Query: 677 FF--EANLEKHQGNLMRASVELAKEWRN 702
A N L + +
Sbjct: 89 TARIHAQNYLKTYNEDIPVEILVRRLSD 116
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 37.2 bits (85), Expect = 0.005
Identities = 5/32 (15%), Positives = 9/32 (28%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
P +++ G GK + I
Sbjct: 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISA 34
Score = 37.2 bits (85), Expect = 0.005
Identities = 5/32 (15%), Positives = 9/32 (28%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKI 847
P +++ G GK + I
Sbjct: 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISA 34
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 36.7 bits (84), Expect = 0.008
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
++G G GK ++ R+ K + + G ++ + + ID
Sbjct: 8 RAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNM-LRGTEIGVLAKTFIDQGKLIP 66
Query: 280 REFEINKVRTR 290
+ V
Sbjct: 67 DDVMTRLVLHE 77
Score = 36.7 bits (84), Expect = 0.008
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
++G G GK ++ R+ K + + G ++ + + ID
Sbjct: 8 RAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNM-LRGTEIGVLAKTFIDQGKLIP 66
Query: 878 REFEINKVRTR 888
+ V
Sbjct: 67 DDVMTRLVLHE 77
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 36.9 bits (84), Expect = 0.009
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 185 VIGQNRAKR----AVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 240
V G + V + LR+ + I P+ IL+ GP G GKT IAR +A
Sbjct: 6 VGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-----PRGILLYGPPGTGKTLIARAVAN 60
Query: 241 LSNAPFIKIEATKF 254
+ A F I +
Sbjct: 61 ETGAFFFLINGPEI 74
Score = 36.9 bits (84), Expect = 0.009
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 783 VIGQNRAKR----AVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 838
V G + V + LR+ + I P+ IL+ GP G GKT IAR +A
Sbjct: 6 VGGCRKQLAQIKEMVELPLRHPALFKAIGVKP-----PRGILLYGPPGTGKTLIARAVAN 60
Query: 839 LSNAPFIKIEATKF 852
+ A F I +
Sbjct: 61 ETGAFFFLINGPEI 74
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 265
Score = 36.7 bits (84), Expect = 0.011
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 185 VIGQNRAKR----AVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 240
+ G KR V + + + + K +L GP G GKT +A+ +A
Sbjct: 9 IGGLEDVKRELQELVQYPVEHPDKFLKFGMTP-----SKGVLFYGPPGCGKTLLAKAIAN 63
Query: 241 LSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
A FI I+ + + G + + +R++ D
Sbjct: 64 ECQANFISIKGPELLT-MWFG-ESEANVREIFD 94
Score = 36.7 bits (84), Expect = 0.011
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 783 VIGQNRAKR----AVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 838
+ G KR V + + + + K +L GP G GKT +A+ +A
Sbjct: 9 IGGLEDVKRELQELVQYPVEHPDKFLKFGMTP-----SKGVLFYGPPGCGKTLLAKAIAN 63
Query: 839 LSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
A FI I+ + + G + + +R++ D
Sbjct: 64 ECQANFISIKGPELLT-MWFG-ESEANVREIFD 94
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 36.7 bits (83), Expect = 0.012
Identities = 24/251 (9%), Positives = 64/251 (25%), Gaps = 28/251 (11%)
Query: 181 LDKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 233
+DKY + L++ + + ++L+ GP G GK
Sbjct: 2 VDKYRPKSLNALSHNEELTNF----LKSLSDQPRD---------LPHLLLYGPNGTGKKT 48
Query: 234 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTII----RDLIDISIKQTREFEINKVRT 289
L + P + + + ++I+ + ++
Sbjct: 49 RCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQE 108
Query: 290 RAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELND 349
++ A+ +D ++ N T+ R K +
Sbjct: 109 LLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRT---MEKYSKNIRLI 165
Query: 350 TGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNE-DE 408
++ I+ + E I+L + ++ +
Sbjct: 166 MVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 225
Query: 409 IQQKAINNVEQ 419
+ ++ +E
Sbjct: 226 NLRVSLLMLES 236
Score = 36.7 bits (83), Expect = 0.012
Identities = 24/251 (9%), Positives = 64/251 (25%), Gaps = 28/251 (11%)
Query: 779 LDKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 831
+DKY + L++ + + ++L+ GP G GK
Sbjct: 2 VDKYRPKSLNALSHNEELTNF----LKSLSDQPRD---------LPHLLLYGPNGTGKKT 48
Query: 832 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTII----RDLIDISIKQTREFEINKVRT 887
L + P + + + ++I+ + ++
Sbjct: 49 RCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQE 108
Query: 888 RAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELND 947
++ A+ +D ++ N T+ R K +
Sbjct: 109 LLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRT---MEKYSKNIRLI 165
Query: 948 TGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNE-DE 1006
++ I+ + E I+L + ++ +
Sbjct: 166 MVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 225
Query: 1007 IQQKAINNVEQ 1017
+ ++ +E
Sbjct: 226 NLRVSLLMLES 236
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 36.1 bits (82), Expect = 0.013
Identities = 6/39 (15%), Positives = 12/39 (30%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 256
P + ++G G GK + + + E
Sbjct: 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQE 44
Score = 36.1 bits (82), Expect = 0.013
Identities = 6/39 (15%), Positives = 12/39 (30%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTE 854
P + ++G G GK + + + E
Sbjct: 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQE 44
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 35.7 bits (81), Expect = 0.017
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
+L++GP G GK A +LA+ P I F G + + +D
Sbjct: 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQISTGEL-FRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 280 REFEINKVRTRAEDA 294
+ V R +
Sbjct: 61 SDLTNELVDDRLNNP 75
Score = 35.7 bits (81), Expect = 0.017
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
+L++GP G GK A +LA+ P I F G + + +D
Sbjct: 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQISTGEL-FRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 878 REFEINKVRTRAEDA 892
+ V R +
Sbjct: 61 SDLTNELVDDRLNNP 75
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 35.7 bits (81), Expect = 0.018
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247
P + ++G G GK R+ + +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHL 30
Score = 35.7 bits (81), Expect = 0.018
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845
P + ++G G GK R+ + +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHL 30
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 35.9 bits (81), Expect = 0.018
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 206 QQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 240
+++ Q +L+ G+G + L++
Sbjct: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSR 46
Score = 35.9 bits (81), Expect = 0.018
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 804 QQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 838
+++ Q +L+ G+G + L++
Sbjct: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSR 46
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 35.3 bits (80), Expect = 0.019
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
I+++G GK A+ + + P I V G ++ +D++D
Sbjct: 2 RIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKS-GSELGKQAKDIMD 54
Score = 35.3 bits (80), Expect = 0.019
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
I+++G GK A+ + + P I V G ++ +D++D
Sbjct: 2 RIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKS-GSELGKQAKDIMD 54
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 35.8 bits (81), Expect = 0.020
Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 22/128 (17%)
Query: 181 LDKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 233
++KY V Q+ A + L++ ++L GP G GKT
Sbjct: 3 VEKYRPKNLDEVTAQDHAVTVLKKTLKSA--------------NLPHMLFYGPPGTGKTS 48
Query: 234 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAED 293
L K P + R + + + + + + + +
Sbjct: 49 TILALTKELYGPDLMKSRILELNASDE-RGISIVREKVKNFARLTVSKPSKHDLENYPCP 107
Query: 294 AAEDRVID 301
+ ++D
Sbjct: 108 PYKIIILD 115
Score = 35.8 bits (81), Expect = 0.020
Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 22/128 (17%)
Query: 779 LDKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTE 831
++KY V Q+ A + L++ ++L GP G GKT
Sbjct: 3 VEKYRPKNLDEVTAQDHAVTVLKKTLKSA--------------NLPHMLFYGPPGTGKTS 48
Query: 832 IARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAED 891
L K P + R + + + + + + + +
Sbjct: 49 TILALTKELYGPDLMKSRILELNASDE-RGISIVREKVKNFARLTVSKPSKHDLENYPCP 107
Query: 892 AAEDRVID 899
+ ++D
Sbjct: 108 PYKIIILD 115
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 35.1 bits (79), Expect = 0.020
Identities = 16/128 (12%), Positives = 31/128 (24%), Gaps = 3/128 (2%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
+L +G GKT + L N ++ T + + I+ R
Sbjct: 3 LLFLGLDNAGKTTLLHMLK---NDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARR 59
Query: 281 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 340
++ D E ++ + K A+
Sbjct: 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119
Query: 341 KEIEIELN 348
E+ L
Sbjct: 120 AELRSALG 127
Score = 35.1 bits (79), Expect = 0.020
Identities = 16/128 (12%), Positives = 31/128 (24%), Gaps = 3/128 (2%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
+L +G GKT + L N ++ T + + I+ R
Sbjct: 3 LLFLGLDNAGKTTLLHMLK---NDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARR 59
Query: 879 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 938
++ D E ++ + K A+
Sbjct: 60 LWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSE 119
Query: 939 KEIEIELN 946
E+ L
Sbjct: 120 AELRSALG 127
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 35.7 bits (81), Expect = 0.020
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
++L+ GP GKT +A ++A+ SN PFIKI + G+ ++ + D + K
Sbjct: 40 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMI-GFSETAKCQAMKKIFDDAYK 98
Query: 278 QTREF 282
Sbjct: 99 SQLSC 103
Score = 35.7 bits (81), Expect = 0.020
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 875
++L+ GP GKT +A ++A+ SN PFIKI + G+ ++ + D + K
Sbjct: 40 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMI-GFSETAKCQAMKKIFDDAYK 98
Query: 876 QTREF 880
Sbjct: 99 SQLSC 103
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 35.3 bits (80), Expect = 0.020
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
+++IGP G GK A L + +A +
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33
Score = 35.3 bits (80), Expect = 0.020
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKI 847
+++IGP G GK A L + +A +
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 35.3 bits (80), Expect = 0.024
Identities = 24/202 (11%), Positives = 60/202 (29%), Gaps = 16/202 (7%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
P I+M+G GKT I+++L + N + +V RD++
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTR----------EFNVGQYRRDMVKTYKS 51
Query: 278 QTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGA 337
N+ + ++ + + + +T + R +
Sbjct: 52 FEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAV---FDATNTTRERRAMIFNFG 108
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 397
N + E+++ + ++ + V + + T R
Sbjct: 109 EQNGYKTFFVESICVDPEVIA---ANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSY 165
Query: 398 EEANKLLNEDEIQQKAINNVEQ 419
E ++ + D K ++ +
Sbjct: 166 ESLDEEQDRDLSYIKIMDVGQS 187
Score = 35.3 bits (80), Expect = 0.024
Identities = 24/202 (11%), Positives = 60/202 (29%), Gaps = 16/202 (7%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 875
P I+M+G GKT I+++L + N + +V RD++
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTR----------EFNVGQYRRDMVKTYKS 51
Query: 876 QTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGA 935
N+ + ++ + + + +T + R +
Sbjct: 52 FEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAV---FDATNTTRERRAMIFNFG 108
Query: 936 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 995
N + E+++ + ++ + V + + T R
Sbjct: 109 EQNGYKTFFVESICVDPEVIA---ANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSY 165
Query: 996 EEANKLLNEDEIQQKAINNVEQ 1017
E ++ + D K ++ +
Sbjct: 166 ESLDEEQDRDLSYIKIMDVGQS 187
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 35.0 bits (79), Expect = 0.024
Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 32/223 (14%)
Query: 201 NRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYV 260
+R +R Q+ G + + + G +G GKT ++ L +
Sbjct: 3 SRNKRGQVVG-TRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHG-------------- 47
Query: 261 GRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNEN 320
T+ D I + + F AE K D
Sbjct: 48 -IPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAE----------VAKLFADAGLVCIT 96
Query: 321 NNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHR 380
+ IS R R+ ++ + + + + K I
Sbjct: 97 SFISPYTQDRNNARQ---IHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFT 153
Query: 381 KKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGII 423
+ + EA +L++ + ++ Q+ + +++ I+
Sbjct: 154 GIDSEYEKPEAPELVLK---TDSCDVNDCVQQVVELLQERDIV 193
Score = 35.0 bits (79), Expect = 0.024
Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 32/223 (14%)
Query: 799 NRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYV 858
+R +R Q+ G + + + G +G GKT ++ L +
Sbjct: 3 SRNKRGQVVG-TRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHG-------------- 47
Query: 859 GRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNEN 918
T+ D I + + F AE K D
Sbjct: 48 -IPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAE----------VAKLFADAGLVCIT 96
Query: 919 NNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHR 978
+ IS R R+ ++ + + + + K I
Sbjct: 97 SFISPYTQDRNNARQ---IHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFT 153
Query: 979 KKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGII 1021
+ + EA +L++ + ++ Q+ + +++ I+
Sbjct: 154 GIDSEYEKPEAPELVLK---TDSCDVNDCVQQVVELLQERDIV 193
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 34.9 bits (79), Expect = 0.027
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247
K I ++G G GK ++ + +
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHL 37
Score = 34.9 bits (79), Expect = 0.027
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845
K I ++G G GK ++ + +
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHL 37
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 35.1 bits (80), Expect = 0.031
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 218 PKNILMIGPTGVGKT----EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
+ +L++G GVGKT ++ R L T G + + I
Sbjct: 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLS--IP 63
Query: 274 ISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKR 332
+ I+ + + A A + R D+ + L T N ++ K
Sbjct: 64 V-IQGPEGTDPAALAYDAVQAMKARGYDL-LFVDTAGRLHTKHNLMEELKKVKRAIAKA 120
Score = 35.1 bits (80), Expect = 0.031
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 816 PKNILMIGPTGVGKT----EIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
+ +L++G GVGKT ++ R L T G + + I
Sbjct: 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLS--IP 63
Query: 872 ISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKR 930
+ I+ + + A A + R D+ + L T N ++ K
Sbjct: 64 V-IQGPEGTDPAALAYDAVQAMKARGYDL-LFVDTAGRLHTKHNLMEELKKVKRAIAKA 120
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 34.5 bits (78), Expect = 0.033
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247
N++++G G GK A ++ P I
Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI 29
Score = 34.5 bits (78), Expect = 0.033
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFI 845
N++++G G GK A ++ P I
Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI 29
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 34.6 bits (78), Expect = 0.033
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFI 247
+++G +G GK+ +A +A +A F+
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFL 35
Score = 34.6 bits (78), Expect = 0.033
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFI 845
+++G +G GK+ +A +A +A F+
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFL 35
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 35.0 bits (80), Expect = 0.038
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
+G+T + VR + V LG + + + + + +K+ L N V AG TADA +++
Sbjct: 27 KGSTAVGVRGRDIVVLGVEKKSV-AKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 84
Query: 79 FFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENG 138
+ H+ + +R + +I G P
Sbjct: 85 RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 144
Query: 139 IG------------AIGSGGIFAQSA-AKALQENTELMPDEIIKKSLVIAEIVSELD 182
AIG G + K + D IK LVI ++ +
Sbjct: 145 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIK--LVIKALLEVVQ 199
Score = 35.0 bits (80), Expect = 0.038
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
+G+T + VR + V LG + + + + + +K+ L N V AG TADA +++
Sbjct: 27 KGSTAVGVRGRDIVVLGVEKKSV-AKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 84
Query: 677 FFEANLEKHQGNLMRASVELAKEWRNDRTLRRLEAMLLTANRETTLIITGNGDVLEPENG 736
+ H+ + +R + +I G P
Sbjct: 85 RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 144
Query: 737 IG------------AIGSGGIFAQSA-AKALQENTELMPDEIIKKSLVIAEIVSELD 780
AIG G + K + D IK LVI ++ +
Sbjct: 145 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIK--LVIKALLEVVQ 199
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 34.2 bits (77), Expect = 0.048
Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF--TEVGYVGRDVDTIIRDLIDISI 276
K ++ G GVGK+ + ++ ++ + I + + + + RD +
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLS 61
Query: 277 KQTREFEINKVRTRAEDAAEDRVIDILV 304
+ ++ + A L
Sbjct: 62 VEKQKKLQIDAAKGIAEEARAGGEGYLF 89
Score = 34.2 bits (77), Expect = 0.048
Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF--TEVGYVGRDVDTIIRDLIDISI 874
K ++ G GVGK+ + ++ ++ + I + + + + RD +
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLS 61
Query: 875 KQTREFEINKVRTRAEDAAEDRVIDILV 902
+ ++ + A L
Sbjct: 62 VEKQKKLQIDAAKGIAEEARAGGEGYLF 89
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 34.2 bits (77), Expect = 0.049
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 8/103 (7%)
Query: 211 PLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRD 270
P I ++G G GK +L K + + G + R
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHL--------SAGDLLRAEQGRAGS 52
Query: 271 LIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLD 313
IK + + + + D + +K K +D
Sbjct: 53 QYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLID 95
Score = 34.2 bits (77), Expect = 0.049
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 8/103 (7%)
Query: 809 PLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRD 868
P I ++G G GK +L K + + G + R
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHL--------SAGDLLRAEQGRAGS 52
Query: 869 LIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLD 911
IK + + + + D + +K K +D
Sbjct: 53 QYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLID 95
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 34.3 bits (78), Expect = 0.049
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI-S 275
P ILM+G GVGKT +LA+ + + + +I
Sbjct: 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPV 67
Query: 276 IKQTREFEINKVRTRAEDAAEDRVIDILV 304
I Q + V A AA+ R ID+L+
Sbjct: 68 IAQHTGADSASVIFDAIQAAKARNIDVLI 96
Score = 34.3 bits (78), Expect = 0.049
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI-S 873
P ILM+G GVGKT +LA+ + + + +I
Sbjct: 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPV 67
Query: 874 IKQTREFEINKVRTRAEDAAEDRVIDILV 902
I Q + V A AA+ R ID+L+
Sbjct: 68 IAQHTGADSASVIFDAIQAAKARNIDVLI 96
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 34.1 bits (77), Expect = 0.051
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFI 247
NI+++G G GK A R+ + P I
Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYGTPHI 29
Score = 34.1 bits (77), Expect = 0.051
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFI 845
NI+++G G GK A R+ + P I
Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYGTPHI 29
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 33.9 bits (76), Expect = 0.053
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 218 PKN-----ILMIGPTGVGKTEIARRLAKLSNAPFIK 248
P+ I + G GK IAR L N +
Sbjct: 1 PRATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGR 36
Score = 33.9 bits (76), Expect = 0.053
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 816 PKN-----ILMIGPTGVGKTEIARRLAKLSNAPFIK 846
P+ I + G GK IAR L N +
Sbjct: 1 PRATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGR 36
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit
(non-catalytic) {Archaeon Thermoplasma acidophilum
[TaxId: 2303]}
Length = 221
Score = 34.3 bits (78), Expect = 0.055
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
+G+T L ++ N V L D +V +I +NS +K++ + +G ADA L+D
Sbjct: 21 KGSTALGMKFANGVLLISDKKVR-SRLIEQNSIEKIQLIDDYVAAV-TSGLVADARVLVD 78
Query: 79 FFEANLEKHQ 88
F + ++ +
Sbjct: 79 FARISAQQEK 88
Score = 34.3 bits (78), Expect = 0.055
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
+G+T L ++ N V L D +V +I +NS +K++ + +G ADA L+D
Sbjct: 21 KGSTALGMKFANGVLLISDKKVR-SRLIEQNSIEKIQLIDDYVAAV-TSGLVADARVLVD 78
Query: 677 FFEANLEKHQ 686
F + ++ +
Sbjct: 79 FARISAQQEK 88
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 34.1 bits (77), Expect = 0.058
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 218 PK--NILMIGPTGVGKTEIARRLAKLSNAPFI 247
PK +++GP G GK A +LAK +
Sbjct: 1 PKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHL 32
Score = 34.1 bits (77), Expect = 0.058
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 816 PK--NILMIGPTGVGKTEIARRLAKLSNAPFI 845
PK +++GP G GK A +LAK +
Sbjct: 1 PKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHL 32
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 34.2 bits (77), Expect = 0.060
Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 278
+ +L +G GKT + +L + + + + + +
Sbjct: 1 RAVLFVGLCDSGKTLL---FVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGH 57
Query: 279 TREFEINKVRTRAEDAAEDRVIDI 302
R ++ A V+D
Sbjct: 58 ESLRFQLLDRFKSSARAVVFVVDS 81
Score = 34.2 bits (77), Expect = 0.060
Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
+ +L +G GKT + +L + + + + + +
Sbjct: 1 RAVLFVGLCDSGKTLL---FVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGH 57
Query: 877 TREFEINKVRTRAEDAAEDRVIDI 900
R ++ A V+D
Sbjct: 58 ESLRFQLLDRFKSSARAVVFVVDS 81
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 243
Score = 34.2 bits (78), Expect = 0.063
Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 13/174 (7%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
+G T + ++ V L D +V + K++ +K+ K+ ++ + A +G ADA L+D
Sbjct: 30 RGATAIGIKCKEGVILIADKRVGSKLLE-KDTIEKIYKIDEH-ICAATSGLVADARVLID 87
Query: 79 FFEANLEKHQGN---------LMRASVELAKEWRNDRTLRRL-EAMLLTANRETTLIITG 128
+ ++ L + + +++ +R ++L+ E +
Sbjct: 88 RARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNEVPKLYET 147
Query: 129 NGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELD 182
+ E AIG G + + + +L D+ + LV + E +
Sbjct: 148 DPSGALLEYKATAIGMGRMAVTEFFEKEYRD-DLSFDDAMVLGLVAMGLSIESE 200
Score = 34.2 bits (78), Expect = 0.063
Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 13/174 (7%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
+G T + ++ V L D +V + K++ +K+ K+ ++ + A +G ADA L+D
Sbjct: 30 RGATAIGIKCKEGVILIADKRVGSKLLE-KDTIEKIYKIDEH-ICAATSGLVADARVLID 87
Query: 677 FFEANLEKHQGN---------LMRASVELAKEWRNDRTLRRL-EAMLLTANRETTLIITG 726
+ ++ L + + +++ +R ++L+ E +
Sbjct: 88 RARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNEVPKLYET 147
Query: 727 NGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELD 780
+ E AIG G + + + +L D+ + LV + E +
Sbjct: 148 DPSGALLEYKATAIGMGRMAVTEFFEKEYRD-DLSFDDAMVLGLVAMGLSIESE 200
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 33.7 bits (76), Expect = 0.071
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 247
P+ ++ +G G GK+ + + +
Sbjct: 14 PEVVVAVGFPGAGKSTFIQEHLVSAGYVHV 43
Score = 33.7 bits (76), Expect = 0.071
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFI 845
P+ ++ +G G GK+ + + +
Sbjct: 14 PEVVVAVGFPGAGKSTFIQEHLVSAGYVHV 43
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 34.0 bits (76), Expect = 0.078
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 182 DKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEI---TPKNILMIGPTGVGK 231
KY V G + + L N ++ + + + ++ GP G+GK
Sbjct: 6 VKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGK 65
Query: 232 TEIARRL 238
T A +
Sbjct: 66 TTAAHLV 72
Score = 34.0 bits (76), Expect = 0.078
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 780 DKY-------VIGQNRAKRAVAIALRNRWRRQQITGPLQQEI---TPKNILMIGPTGVGK 829
KY V G + + L N ++ + + + ++ GP G+GK
Sbjct: 6 VKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGK 65
Query: 830 TEIARRL 836
T A +
Sbjct: 66 TTAAHLV 72
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 33.6 bits (76), Expect = 0.089
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAKL 241
P I+++G G GK A +LA
Sbjct: 11 IPYVIMLVGVQGTGKATTAGKLAYF 35
Score = 33.6 bits (76), Expect = 0.089
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAKL 839
P I+++G G GK A +LA
Sbjct: 11 IPYVIMLVGVQGTGKATTAGKLAYF 35
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 33.5 bits (76), Expect = 0.099
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKL 241
++G G GKT A +LA
Sbjct: 10 RNLWFLVGLQGSGKTTTAAKLALY 33
Score = 33.5 bits (76), Expect = 0.099
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKL 839
++G G GKT A +LA
Sbjct: 10 RNLWFLVGLQGSGKTTTAAKLALY 33
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 33.1 bits (74), Expect = 0.100
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFI 247
K ++ GP GVGK+ +RLA +
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31
Score = 33.1 bits (74), Expect = 0.100
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFI 845
K ++ GP GVGK+ +RLA +
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 250
Score = 33.5 bits (76), Expect = 0.10
Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
T L + + V L + + + ++K+ KL ++ + +AG T+DA L +
Sbjct: 29 HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNED-MACSVAGITSDANVLTN 87
Query: 79 FFEANLEKHQ 88
+++
Sbjct: 88 ELRLIAQRYL 97
Score = 33.5 bits (76), Expect = 0.10
Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
T L + + V L + + + ++K+ KL ++ + +AG T+DA L +
Sbjct: 29 HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNED-MACSVAGITSDANVLTN 87
Query: 677 FFEANLEKHQ 686
+++
Sbjct: 88 ELRLIAQRYL 97
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 32.8 bits (73), Expect = 0.11
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 218 PKNILMIGPTGVGKTEIARRL-AKLSNAPFI 247
K IL IG G GK+ AR AK I
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAKNPGFYNI 32
Score = 32.8 bits (73), Expect = 0.11
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 816 PKNILMIGPTGVGKTEIARRL-AKLSNAPFI 845
K IL IG G GK+ AR AK I
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAKNPGFYNI 32
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 33.1 bits (74), Expect = 0.12
Identities = 23/215 (10%), Positives = 64/215 (29%), Gaps = 16/215 (7%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFI------KIEATKFTEVGYVGRDVDTIIRDLIDI 274
I + GP+G GK + + +A+ + ++ A D ++ +
Sbjct: 6 ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHL 65
Query: 275 SIKQTREFEINKVRTRAEDAAED--RVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKR 332
++ +V ED + + S+ + + R++
Sbjct: 66 DVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLI 125
Query: 333 LREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKT----MFSVIGNHRKKTRKIKI 388
+ + Q+K ++ +++ + +
Sbjct: 126 ADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRN 185
Query: 389 REAIKLLIDEEA----NKLLNEDEIQQKAINNVEQ 419
R L+ +A + L+ +++ +KA+ Q
Sbjct: 186 RAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQ 220
Score = 33.1 bits (74), Expect = 0.12
Identities = 23/215 (10%), Positives = 64/215 (29%), Gaps = 16/215 (7%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFI------KIEATKFTEVGYVGRDVDTIIRDLIDI 872
I + GP+G GK + + +A+ + ++ A D ++ +
Sbjct: 6 ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHL 65
Query: 873 SIKQTREFEINKVRTRAEDAAED--RVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKR 930
++ +V ED + + S+ + + R++
Sbjct: 66 DVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLI 125
Query: 931 LREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKT----MFSVIGNHRKKTRKIKI 986
+ + Q+K ++ +++ + +
Sbjct: 126 ADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRN 185
Query: 987 REAIKLLIDEEA----NKLLNEDEIQQKAINNVEQ 1017
R L+ +A + L+ +++ +KA+ Q
Sbjct: 186 RAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQ 220
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 32.7 bits (73), Expect = 0.13
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 278
+++ + GP GVGKT + + +++ + + ++ EV GR + + L
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 279 TR 280
+R
Sbjct: 62 SR 63
Score = 32.7 bits (73), Expect = 0.13
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQ 876
+++ + GP GVGKT + + +++ + + ++ EV GR + + L
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 877 TR 878
+R
Sbjct: 62 SR 63
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 32.8 bits (74), Expect = 0.15
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 255
+L++G GK+ I +++ L I TKF
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQ 43
Score = 32.8 bits (74), Expect = 0.15
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 853
+L++G GK+ I +++ L I TKF
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQ 43
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 32.6 bits (73), Expect = 0.15
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 219 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 257
K +++ G GVG T ++ + + F V
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSV 40
Score = 32.6 bits (73), Expect = 0.15
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 817 KNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEV 855
K +++ G GVG T ++ + + F V
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSV 40
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 32.5 bits (73), Expect = 0.15
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 219 KNILMIGPTGVGKTEIARRLAK 240
K ++++G GVG+ I L
Sbjct: 4 KTLVLLGAHGVGRRHIKNTLIT 25
Score = 32.5 bits (73), Expect = 0.15
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 817 KNILMIGPTGVGKTEIARRLAK 838
K ++++G GVG+ I L
Sbjct: 4 KTLVLLGAHGVGRRHIKNTLIT 25
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 32.4 bits (72), Expect = 0.15
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKI 249
+L++G GVGK+ +AR + + P +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEA 32
Score = 32.4 bits (72), Expect = 0.15
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKI 847
+L++G GVGK+ +AR + + P +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEA 32
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 32.5 bits (73), Expect = 0.16
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 275
IL+IG + VGKT R A S P +V + R+ I + D +
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62
Score = 32.5 bits (73), Expect = 0.16
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 873
IL+IG + VGKT R A S P +V + R+ I + D +
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 33.1 bits (75), Expect = 0.18
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAK 240
T N ++IG GVGKT I LA+
Sbjct: 42 TKNNPVLIGEPGVGKTAIVEGLAQ 65
Score = 33.1 bits (75), Expect = 0.18
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAK 838
T N ++IG GVGKT I LA+
Sbjct: 42 TKNNPVLIGEPGVGKTAIVEGLAQ 65
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 33.0 bits (75), Expect = 0.18
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 217 TPKNILMIGPTGVGKTEIARRLAKLSN 243
+L+ G +GVGK +AR + KLS+
Sbjct: 22 AECPVLITGESGVGKEVVARLIHKLSD 48
Score = 33.0 bits (75), Expect = 0.18
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 815 TPKNILMIGPTGVGKTEIARRLAKLSN 841
+L+ G +GVGK +AR + KLS+
Sbjct: 22 AECPVLITGESGVGKEVVARLIHKLSD 48
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 32.4 bits (73), Expect = 0.20
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKL 241
P I+++G G GKT +LAK+
Sbjct: 11 PFVIMVVGVNGTGKTTSCGKLAKM 34
Score = 32.4 bits (73), Expect = 0.20
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKL 839
P I+++G G GKT +LAK+
Sbjct: 11 PFVIMVVGVNGTGKTTSCGKLAKM 34
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 32.3 bits (72), Expect = 0.20
Identities = 13/128 (10%), Positives = 30/128 (23%), Gaps = 3/128 (2%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
++++G GKT I + + + E+ +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWN 77
Query: 281 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 340
+ N + DR + + + K+ + +
Sbjct: 78 TYYTNTEFVIVVVDSTDRERI---SVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTV 134
Query: 341 KEIEIELN 348
EI L
Sbjct: 135 AEISQFLK 142
Score = 32.3 bits (72), Expect = 0.20
Identities = 13/128 (10%), Positives = 30/128 (23%), Gaps = 3/128 (2%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
++++G GKT I + + + E+ +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWN 77
Query: 879 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 938
+ N + DR + + + K+ + +
Sbjct: 78 TYYTNTEFVIVVVDSTDRERI---SVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTV 134
Query: 939 KEIEIELN 946
EI L
Sbjct: 135 AEISQFLK 142
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 32.3 bits (72), Expect = 0.21
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 252
+++ GP+ VGK+ + R L + + AT
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSAT 36
Score = 32.3 bits (72), Expect = 0.21
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEAT 850
+++ GP+ VGK+ + R L + + AT
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSAT 36
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 227
Score = 32.3 bits (73), Expect = 0.23
Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 11/83 (13%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
+G +++ + + V + T + KV +LY + G + L
Sbjct: 18 RGRSVVVLTFRDGVLFVAENPST--------ALHKVSELYDR-LGFAAVGKYNEFENLRR 68
Query: 79 FF--EANLEKHQGNLMRASVELA 99
A++ + + +
Sbjct: 69 AGIVHADMRGYSYDRRDVTGRSL 91
Score = 32.3 bits (73), Expect = 0.23
Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 11/83 (13%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
+G +++ + + V + T + KV +LY + G + L
Sbjct: 18 RGRSVVVLTFRDGVLFVAENPST--------ALHKVSELYDR-LGFAAVGKYNEFENLRR 68
Query: 677 FF--EANLEKHQGNLMRASVELA 697
A++ + + +
Sbjct: 69 AGIVHADMRGYSYDRRDVTGRSL 91
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 31.9 bits (71), Expect = 0.27
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 216 ITPKNILMIGPTGVGKTEIARRLAK 240
+T ++++G VGK+ I R
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVS 25
Score = 31.9 bits (71), Expect = 0.27
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 814 ITPKNILMIGPTGVGKTEIARRLAK 838
+T ++++G VGK+ I R
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVS 25
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 32.0 bits (71), Expect = 0.29
Identities = 13/128 (10%), Positives = 31/128 (24%), Gaps = 3/128 (2%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
++ +G GKT + L + E+ G T + + +
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWK 75
Query: 281 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 340
+ D ++ + N+ + K R A+
Sbjct: 76 NYLPAINGIVFLVDCADHERL---LESKEELDSLMTDETIANVPILILGNKIDRPEAISE 132
Query: 341 KEIEIELN 348
+ +
Sbjct: 133 ERLREMFG 140
Score = 32.0 bits (71), Expect = 0.29
Identities = 13/128 (10%), Positives = 31/128 (24%), Gaps = 3/128 (2%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
++ +G GKT + L + E+ G T + + +
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWK 75
Query: 879 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 938
+ D ++ + N+ + K R A+
Sbjct: 76 NYLPAINGIVFLVDCADHERL---LESKEELDSLMTDETIANVPILILGNKIDRPEAISE 132
Query: 939 KEIEIELN 946
+ +
Sbjct: 133 ERLREMFG 140
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 31.8 bits (71), Expect = 0.34
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPF 246
+++ GP+G GK+ + ++L + ++ F
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28
Score = 31.8 bits (71), Expect = 0.34
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPF 844
+++ GP+G GK+ + ++L + ++ F
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 241
Score = 31.9 bits (72), Expect = 0.36
Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 14/177 (7%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
+GT + V+ N V LG + + T + + KV K+ + V+ +G AD+ L++
Sbjct: 27 RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSH-VVLSFSGLNADSRILIE 85
Query: 79 FFEANLEKHQ---------GNLMRASVELAKEWRNDRTLRRLEAMLLTA----NRETTLI 125
+ H+ L R + + + +R L A + +
Sbjct: 86 KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 145
Query: 126 ITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELD 182
+ IG + + + E L + ++ +
Sbjct: 146 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQ 202
Score = 31.9 bits (72), Expect = 0.36
Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 14/177 (7%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
+GT + V+ N V LG + + T + + KV K+ + V+ +G AD+ L++
Sbjct: 27 RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSH-VVLSFSGLNADSRILIE 85
Query: 677 FFEANLEKHQ---------GNLMRASVELAKEWRNDRTLRRLEAMLLTA----NRETTLI 723
+ H+ L R + + + +R L A + +
Sbjct: 86 KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 145
Query: 724 ITGNGDVLEPENGIGAIGSGGIFAQSAAKALQENTELMPDEIIKKSLVIAEIVSELD 780
+ IG + + + E L + ++ +
Sbjct: 146 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQ 202
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 233
Score = 31.6 bits (71), Expect = 0.41
Identities = 10/98 (10%), Positives = 24/98 (24%), Gaps = 4/98 (4%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
G + ++ N V L + + ++ K + +G D L+
Sbjct: 30 GGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEP--ITKHIGLVYSGMGPDYRVLVH 87
Query: 79 FF--EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAM 114
A + +L + +
Sbjct: 88 RARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG 125
Score = 31.6 bits (71), Expect = 0.41
Identities = 10/98 (10%), Positives = 24/98 (24%), Gaps = 4/98 (4%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
G + ++ N V L + + ++ K + +G D L+
Sbjct: 30 GGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEP--ITKHIGLVYSGMGPDYRVLVH 87
Query: 677 FF--EANLEKHQGNLMRASVELAKEWRNDRTLRRLEAM 712
A + +L + +
Sbjct: 88 RARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG 125
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 31.2 bits (69), Expect = 0.44
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G G GKT +R
Sbjct: 6 LVLVGDGGTGKTTFVKRHLT 25
Score = 31.2 bits (69), Expect = 0.44
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G G GKT +R
Sbjct: 6 LVLVGDGGTGKTTFVKRHLT 25
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 31.5 bits (71), Expect = 0.45
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
GTT + ++ + V + +T ++ K++ + ++ + +G D L++
Sbjct: 29 NGTTSIGIKCNDGVVFAVEKLITSKLLVP-QKNVKIQVVDRH-IGCVYSGLIPDGRHLVN 86
Query: 79 FFEANLEKHQGNLMR 93
+
Sbjct: 87 RGREEAASFKKLYKT 101
Score = 31.5 bits (71), Expect = 0.45
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
GTT + ++ + V + +T ++ K++ + ++ + +G D L++
Sbjct: 29 NGTTSIGIKCNDGVVFAVEKLITSKLLVP-QKNVKIQVVDRH-IGCVYSGLIPDGRHLVN 86
Query: 677 FFEANLEKHQGNLMR 691
+
Sbjct: 87 RGREEAASFKKLYKT 101
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 31.1 bits (69), Expect = 0.46
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++M+G GVGK+ + +
Sbjct: 7 VIMVGSGGVGKSALTLQFMY 26
Score = 31.1 bits (69), Expect = 0.46
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++M+G GVGK+ + +
Sbjct: 7 VIMVGSGGVGKSALTLQFMY 26
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 31.2 bits (69), Expect = 0.47
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + + +
Sbjct: 9 LVVVGGGGVGKSALTIQFIQ 28
Score = 31.2 bits (69), Expect = 0.47
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + + +
Sbjct: 9 LVVVGGGGVGKSALTIQFIQ 28
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 31.1 bits (69), Expect = 0.48
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 271
ILM+G GKT I +L I F ++V + D+
Sbjct: 15 ILMLGLDAAGKTTILYKLKL--GQSVTTIPTVGFNVETVTYKNVKFNVWDV 63
Score = 31.1 bits (69), Expect = 0.48
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 869
ILM+G GKT I +L I F ++V + D+
Sbjct: 15 ILMLGLDAAGKTTILYKLKL--GQSVTTIPTVGFNVETVTYKNVKFNVWDV 63
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 31.8 bits (71), Expect = 0.51
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 193 RAVAIALRNRWRRQQITG-PLQQEITPKNILMIGPTGVGKTEIARRLA 239
+ R + ++ + G P+ ++ P+++L+ G TG GK+ + R LA
Sbjct: 24 GKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELA 71
Score = 31.8 bits (71), Expect = 0.51
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 791 RAVAIALRNRWRRQQITG-PLQQEITPKNILMIGPTGVGKTEIARRLA 837
+ R + ++ + G P+ ++ P+++L+ G TG GK+ + R LA
Sbjct: 24 GKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELA 71
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 31.0 bits (69), Expect = 0.52
Identities = 21/171 (12%), Positives = 48/171 (28%), Gaps = 6/171 (3%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSN-APFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
IL++G GK+ +++ + P I F + VD + +
Sbjct: 5 ILLLGAGESGKSTFLKQMRIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFEC 64
Query: 280 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRL--REGA 337
+ + + + D+V+ + + F NN + +
Sbjct: 65 FDS-VTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDL 123
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKI 388
L+ K + + D E P + ++ R +
Sbjct: 124 LEEKVQVVSIKDYFL--EFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYH 172
Score = 31.0 bits (69), Expect = 0.52
Identities = 21/171 (12%), Positives = 48/171 (28%), Gaps = 6/171 (3%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSN-APFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
IL++G GK+ +++ + P I F + VD + +
Sbjct: 5 ILLLGAGESGKSTFLKQMRIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFEC 64
Query: 878 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRL--REGA 935
+ + + + D+V+ + + F NN + +
Sbjct: 65 FDS-VTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDL 123
Query: 936 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKI 986
L+ K + + D E P + ++ R +
Sbjct: 124 LEEKVQVVSIKDYFL--EFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYH 172
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 30.7 bits (68), Expect = 0.55
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G VGKT + R +
Sbjct: 6 VVLLGEGCVGKTSLVLRYCE 25
Score = 30.7 bits (68), Expect = 0.55
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G VGKT + R +
Sbjct: 6 VVLLGEGCVGKTSLVLRYCE 25
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 30.7 bits (68), Expect = 0.58
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 209 TGPLQQEITPKNILMIGPTGVGKTEIARRLAK 240
GP + +++G VGKT + A
Sbjct: 3 HGPGALML---KCVVVGDGAVGKTCLLMSYAN 31
Score = 30.7 bits (68), Expect = 0.58
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 807 TGPLQQEITPKNILMIGPTGVGKTEIARRLAK 838
GP + +++G VGKT + A
Sbjct: 3 HGPGALML---KCVVVGDGAVGKTCLLMSYAN 31
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 30.7 bits (68), Expect = 0.64
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 12/135 (8%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
+L++G GK+ +++ + V G + +
Sbjct: 5 LLLLGTGESGKSTFIKQMRI-----------IHGSGVPTTGIIEYPFDLQSVIFRMVDVG 53
Query: 281 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 340
+ R I LV E + + +NEN ++ +FR + N
Sbjct: 54 GQRSER-RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQN 112
Query: 341 KEIEIELNDTGPHME 355
+ + LN E
Sbjct: 113 SSVILFLNKKDLLEE 127
Score = 30.7 bits (68), Expect = 0.64
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 12/135 (8%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
+L++G GK+ +++ + V G + +
Sbjct: 5 LLLLGTGESGKSTFIKQMRI-----------IHGSGVPTTGIIEYPFDLQSVIFRMVDVG 53
Query: 879 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 938
+ R I LV E + + +NEN ++ +FR + N
Sbjct: 54 GQRSER-RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQN 112
Query: 939 KEIEIELNDTGPHME 953
+ + LN E
Sbjct: 113 SSVILFLNKKDLLEE 127
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 31.3 bits (69), Expect = 0.65
Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 183 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 242
+ + A+A NR + IG G+GKT +A+ K
Sbjct: 16 PELRVRRGEAEALARIYLNRLLSGAGLSDV-----NMIYGSIGRVGIGKTTLAKFTVKRV 70
Query: 243 NAPFIKI 249
+ K
Sbjct: 71 SEAAAKE 77
Score = 31.3 bits (69), Expect = 0.65
Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 781 KYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLS 840
+ + A+A NR + IG G+GKT +A+ K
Sbjct: 16 PELRVRRGEAEALARIYLNRLLSGAGLSDV-----NMIYGSIGRVGIGKTTLAKFTVKRV 70
Query: 841 NAPFIKI 847
+ K
Sbjct: 71 SEAAAKE 77
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.7 bits (68), Expect = 0.65
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
I++ GP+G GK+ + ++L
Sbjct: 4 IVISGPSGTGKSTLLKKLFA 23
Score = 30.7 bits (68), Expect = 0.65
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
I++ GP+G GK+ + ++L
Sbjct: 4 IVISGPSGTGKSTLLKKLFA 23
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 234
Score = 31.2 bits (70), Expect = 0.65
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
G+T + ++ V L + ++T + + K V + ++G ADA TL+D
Sbjct: 26 LGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVE--IDAHIGCAMSGLIADAKTLID 83
Query: 79 FFEANLEKHQ 88
+ H
Sbjct: 84 KARVETQNHW 93
Score = 31.2 bits (70), Expect = 0.65
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
G+T + ++ V L + ++T + + K V + ++G ADA TL+D
Sbjct: 26 LGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVE--IDAHIGCAMSGLIADAKTLID 83
Query: 677 FFEANLEKHQ 686
+ H
Sbjct: 84 KARVETQNHW 93
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 30.4 bits (67), Expect = 0.66
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G VGK+ + +R K
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
Score = 30.4 bits (67), Expect = 0.66
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G VGK+ + +R K
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 30.7 bits (68), Expect = 0.66
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+ ++G TGVGK+ I R +
Sbjct: 7 VCLLGDTGVGKSSIMWRFVE 26
Score = 30.7 bits (68), Expect = 0.66
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+ ++G TGVGK+ I R +
Sbjct: 7 VCLLGDTGVGKSSIMWRFVE 26
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 31.0 bits (69), Expect = 0.66
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 255
++ P+G GK+ + + L K ++ + T
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTT 39
Score = 31.0 bits (69), Expect = 0.66
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 853
++ P+G GK+ + + L K ++ + T
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTT 39
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase
PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 30.9 bits (68), Expect = 0.66
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 211 PLQQEITP----KNILMIGPTGVGKTEIA 235
Q+ I N L++ PTG+GKT IA
Sbjct: 12 IYQEVIYAKCKETNCLIVLPTGLGKTLIA 40
Score = 30.9 bits (68), Expect = 0.66
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 809 PLQQEITP----KNILMIGPTGVGKTEIA 833
Q+ I N L++ PTG+GKT IA
Sbjct: 12 IYQEVIYAKCKETNCLIVLPTGLGKTLIA 40
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 30.5 bits (67), Expect = 0.72
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
I ++G VGK+ + + +
Sbjct: 7 IAILGYRSVGKSSLTIQFVE 26
Score = 30.5 bits (67), Expect = 0.72
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
I ++G VGK+ + + +
Sbjct: 7 IAILGYRSVGKSSLTIQFVE 26
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 30.4 bits (67), Expect = 0.74
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
I++IG + VGKT + R
Sbjct: 5 IIVIGDSNVGKTCLTYRFCA 24
Score = 30.4 bits (67), Expect = 0.74
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
I++IG + VGKT + R
Sbjct: 5 IIVIGDSNVGKTCLTYRFCA 24
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 30.3 bits (67), Expect = 0.76
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + +L +
Sbjct: 6 LVVVGAGGVGKSALTIQLIQ 25
Score = 30.3 bits (67), Expect = 0.76
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + +L +
Sbjct: 6 LVVVGAGGVGKSALTIQLIQ 25
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 30.4 bits (67), Expect = 0.78
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + + +
Sbjct: 7 LVVVGDGGVGKSALTIQFFQ 26
Score = 30.4 bits (67), Expect = 0.78
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + + +
Sbjct: 7 LVVVGDGGVGKSALTIQFFQ 26
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 30.3 bits (67), Expect = 0.78
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
IL++G GKT + ++LA
Sbjct: 19 ILLLGLDNAGKTTLLKQLAS 38
Score = 30.3 bits (67), Expect = 0.78
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
IL++G GKT + ++LA
Sbjct: 19 ILLLGLDNAGKTTLLKQLAS 38
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 30.4 bits (67), Expect = 0.82
Identities = 6/27 (22%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Query: 214 QEITPKNILMIGPTGVGKTEIARRLAK 240
+E+ + ++G GKT +A
Sbjct: 1 EEM---ELTLVGLQYSGKTTFVNVIAS 24
Score = 30.4 bits (67), Expect = 0.82
Identities = 6/27 (22%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Query: 812 QEITPKNILMIGPTGVGKTEIARRLAK 838
+E+ + ++G GKT +A
Sbjct: 1 EEM---ELTLVGLQYSGKTTFVNVIAS 24
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 30.4 bits (67), Expect = 0.85
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+LM+G GKT I ++
Sbjct: 5 LLMLGLDNAGKTTILKKFNG 24
Score = 30.4 bits (67), Expect = 0.85
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+LM+G GKT I ++
Sbjct: 5 LLMLGLDNAGKTTILKKFNG 24
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 30.2 bits (67), Expect = 0.86
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+L +G +GVGKT R
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
Score = 30.2 bits (67), Expect = 0.86
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+L +G +GVGKT R
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 30.4 bits (67), Expect = 0.88
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G +GVGKT + R
Sbjct: 5 VIILGDSGVGKTSLMHRYVN 24
Score = 30.4 bits (67), Expect = 0.88
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G +GVGKT + R
Sbjct: 5 VIILGDSGVGKTSLMHRYVN 24
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.3 bits (67), Expect = 0.88
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+ + G GVGK+ + R K
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
Score = 30.3 bits (67), Expect = 0.88
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+ + G GVGK+ + R K
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 30.0 bits (66), Expect = 0.89
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
ILM+G GKT I +L
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
Score = 30.0 bits (66), Expect = 0.89
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
ILM+G GKT I +L
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 30.0 bits (66), Expect = 0.98
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+ + G GVGK+ + R
Sbjct: 5 LAIFGRAGVGKSALVVRFLT 24
Score = 30.0 bits (66), Expect = 0.98
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+ + G GVGK+ + R
Sbjct: 5 LAIFGRAGVGKSALVVRFLT 24
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 30.1 bits (66), Expect = 0.98
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSN 243
+++IG GVGK+ +A A + +
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHD 28
Score = 30.1 bits (66), Expect = 0.98
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSN 841
+++IG GVGK+ +A A + +
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHD 28
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.0 bits (66), Expect = 0.99
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G + VGK+ + R K
Sbjct: 9 LVLLGESAVGKSSLVLRFVK 28
Score = 30.0 bits (66), Expect = 0.99
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G + VGK+ + R K
Sbjct: 9 LVLLGESAVGKSSLVLRFVK 28
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 29.9 bits (66), Expect = 1.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++ +G VGKT + R
Sbjct: 3 LVFLGEQSVGKTSLITRFMY 22
Score = 29.9 bits (66), Expect = 1.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++ +G VGKT + R
Sbjct: 3 LVFLGEQSVGKTSLITRFMY 22
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 30.0 bits (66), Expect = 1.0
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + + +
Sbjct: 6 LVVLGSGGVGKSALTVQFVQ 25
Score = 30.0 bits (66), Expect = 1.0
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + + +
Sbjct: 6 LVVLGSGGVGKSALTVQFVQ 25
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.0 bits (66), Expect = 1.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + + +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQ 27
Score = 30.0 bits (66), Expect = 1.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + + +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQ 27
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/176 (7%), Positives = 45/176 (25%), Gaps = 3/176 (1%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGY---VGRDVDTIIRDLIDI 274
P+ + + G VGK+ + L K + E + + +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 275 SIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLR 334
+ + +T + + ++ ++ + +
Sbjct: 62 MMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFE 121
Query: 335 EGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
G+L + E I + + + ++ V + + + +
Sbjct: 122 NGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKG 177
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/176 (7%), Positives = 45/176 (25%), Gaps = 3/176 (1%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGY---VGRDVDTIIRDLIDI 872
P+ + + G VGK+ + L K + E + + +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 873 SIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLR 932
+ + +T + + ++ ++ + +
Sbjct: 62 MMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFE 121
Query: 933 EGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
G+L + E I + + + ++ V + + + +
Sbjct: 122 NGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKG 177
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.0 bits (66), Expect = 1.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
I+++G + GKT + AK
Sbjct: 5 IVVVGDSQCGKTALLHVFAK 24
Score = 30.0 bits (66), Expect = 1.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
I+++G + GKT + AK
Sbjct: 5 IVVVGDSQCGKTALLHVFAK 24
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 30.1 bits (66), Expect = 1.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G +GVGKT + +
Sbjct: 5 VIILGDSGVGKTSLMNQYVN 24
Score = 30.1 bits (66), Expect = 1.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G +GVGKT + +
Sbjct: 5 VIILGDSGVGKTSLMNQYVN 24
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 29.3 bits (64), Expect = 1.3
Identities = 4/17 (23%), Positives = 6/17 (35%)
Query: 219 KNILMIGPTGVGKTEIA 235
++ G GKT
Sbjct: 8 MTTVLDFHPGAGKTRRF 24
Score = 29.3 bits (64), Expect = 1.3
Identities = 4/17 (23%), Positives = 6/17 (35%)
Query: 817 KNILMIGPTGVGKTEIA 833
++ G GKT
Sbjct: 8 MTTVLDFHPGAGKTRRF 24
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 29.5 bits (65), Expect = 1.3
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + +
Sbjct: 6 VVVLGSGGVGKSALTVQFVT 25
Score = 29.5 bits (65), Expect = 1.3
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + +
Sbjct: 6 VVVLGSGGVGKSALTVQFVT 25
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 29.9 bits (66), Expect = 1.3
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
L+IG G GK+ + + +
Sbjct: 8 FLVIGNAGTGKSCLLHQFIE 27
Score = 29.9 bits (66), Expect = 1.3
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
L+IG G GK+ + + +
Sbjct: 8 FLVIGNAGTGKSCLLHQFIE 27
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.5 bits (65), Expect = 1.4
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++IG GVGK+ + + +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTE 26
Score = 29.5 bits (65), Expect = 1.4
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++IG GVGK+ + + +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTE 26
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.8 bits (66), Expect = 1.4
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 221 ILMIGPTGVGKTEIARRLAK---LSNAPFIKIEATKFTEVGYVGRDVDTIIRD 270
I++IG GVGKT + RR + V G V I D
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
Score = 29.8 bits (66), Expect = 1.4
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 819 ILMIGPTGVGKTEIARRLAK---LSNAPFIKIEATKFTEVGYVGRDVDTIIRD 868
I++IG GVGKT + RR + V G V I D
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 29.7 bits (65), Expect = 1.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
IL++G G GKT I RL
Sbjct: 8 ILILGLDGAGKTTILYRLQV 27
Score = 29.7 bits (65), Expect = 1.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
IL++G G GKT I RL
Sbjct: 8 ILILGLDGAGKTTILYRLQV 27
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 29.8 bits (66), Expect = 1.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 213 QQEITPKNILMIGPTGVGKTEIARRLAK 240
+ +T IL+IG +GVGK+ + R
Sbjct: 2 EDVLTTLKILIIGESGVGKSSLLLRFTD 29
Score = 29.8 bits (66), Expect = 1.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 811 QQEITPKNILMIGPTGVGKTEIARRLAK 838
+ +T IL+IG +GVGK+ + R
Sbjct: 2 EDVLTTLKILIIGESGVGKSSLLLRFTD 29
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 29.5 bits (66), Expect = 1.5
Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 335 EGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKL 394
E A+ ++ + G + + PP EE + + + + R+A
Sbjct: 79 EKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANND 138
Query: 395 LIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKI 431
L +K ++EDE +KA +++ + + +ID++
Sbjct: 139 LKALLKDKEISEDED-RKAQEEIQKLTDVAVKKIDEV 174
Score = 29.5 bits (66), Expect = 1.5
Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 933 EGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKL 992
E A+ ++ + G + + PP EE + + + + R+A
Sbjct: 79 EKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANND 138
Query: 993 LIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKI 1029
L +K ++EDE +KA +++ + + +ID++
Sbjct: 139 LKALLKDKEISEDED-RKAQEEIQKLTDVAVKKIDEV 174
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 29.5 bits (65), Expect = 1.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G +GVGKT + R
Sbjct: 9 VMLVGDSGVGKTCLLVRFKD 28
Score = 29.5 bits (65), Expect = 1.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G +GVGKT + R
Sbjct: 9 VMLVGDSGVGKTCLLVRFKD 28
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 29.5 bits (65), Expect = 1.5
Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
+L++G GK+ I +++ K+ + I T FT + D +
Sbjct: 5 LLLLGAGESGKSTIVKQM-KIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSER-KKWIHC 62
Query: 281 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 340
+ + + D V+ F++ NN
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLF 122
Query: 341 KEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 390
+E + T + E EE A I+ F + N RK T++I
Sbjct: 123 EEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDL-NKRKDTKEIYTHF 171
Score = 29.5 bits (65), Expect = 1.5
Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
+L++G GK+ I +++ K+ + I T FT + D +
Sbjct: 5 LLLLGAGESGKSTIVKQM-KIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSER-KKWIHC 62
Query: 879 EFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDN 938
+ + + D V+ F++ NN
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLF 122
Query: 939 KEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 988
+E + T + E EE A I+ F + N RK T++I
Sbjct: 123 EEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDL-NKRKDTKEIYTHF 171
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 29.5 bits (65), Expect = 1.5
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GVGK+ + R
Sbjct: 9 VILLGDGGVGKSSLMNRYVT 28
Score = 29.5 bits (65), Expect = 1.5
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GVGK+ + R
Sbjct: 9 VILLGDGGVGKSSLMNRYVT 28
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 29.6 bits (65), Expect = 1.5
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+++G VGKT +
Sbjct: 8 CVVVGDGAVGKTCLLISYTT 27
Score = 29.6 bits (65), Expect = 1.5
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+++G VGKT +
Sbjct: 8 CVVVGDGAVGKTCLLISYTT 27
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.4 bits (65), Expect = 1.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
IL+IG +GVGK+ + R +
Sbjct: 5 ILLIGDSGVGKSCLLVRFVE 24
Score = 29.4 bits (65), Expect = 1.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
IL+IG +GVGK+ + R +
Sbjct: 5 ILLIGDSGVGKSCLLVRFVE 24
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 29.2 bits (64), Expect = 1.8
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++++G GKT + +K
Sbjct: 5 LVIVGDGACGKTCLLIVNSK 24
Score = 29.2 bits (64), Expect = 1.8
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++++G GKT + +K
Sbjct: 5 LVIVGDGACGKTCLLIVNSK 24
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 29.6 bits (65), Expect = 1.8
Identities = 9/65 (13%), Positives = 22/65 (33%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 280
++ +G G GKT + + + T V + + +R+ + +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 62
Query: 281 EFEIN 285
+ N
Sbjct: 63 GYGPN 67
Score = 29.6 bits (65), Expect = 1.8
Identities = 9/65 (13%), Positives = 22/65 (33%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTR 878
++ +G G GKT + + + T V + + +R+ + +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 62
Query: 879 EFEIN 883
+ N
Sbjct: 63 GYGPN 67
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 29.1 bits (64), Expect = 1.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+++IG +GVGK+ + R +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTR 26
Score = 29.1 bits (64), Expect = 1.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+++IG +GVGK+ + R +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTR 26
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.1 bits (64), Expect = 2.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
++IG TGVGK+ + +
Sbjct: 6 YIIIGDTGVGKSCLLLQFTD 25
Score = 29.1 bits (64), Expect = 2.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
++IG TGVGK+ + +
Sbjct: 6 YIIIGDTGVGKSCLLLQFTD 25
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 29.3 bits (65), Expect = 2.1
Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTI----IRDLID 273
+IL+ G E++ L + +++ K ++V + + + I IR + D
Sbjct: 15 GISILINGEDLSYPREVSLELPE-----YVEKFPPKASDVLEIDPEGENIGIDDIRTIKD 69
Score = 29.3 bits (65), Expect = 2.1
Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTI----IRDLID 871
+IL+ G E++ L + +++ K ++V + + + I IR + D
Sbjct: 15 GISILINGEDLSYPREVSLELPE-----YVEKFPPKASDVLEIDPEGENIGIDDIRTIKD 69
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 29.2 bits (64), Expect = 2.1
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 225 GPTGVGKTEIARRLAKLSNAPFI 247
GP GK+ +A+ +AK ++
Sbjct: 10 GPASSGKSTVAKIIAKDFGFTYL 32
Score = 29.2 bits (64), Expect = 2.1
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 823 GPTGVGKTEIARRLAKLSNAPFI 845
GP GK+ +A+ +AK ++
Sbjct: 10 GPASSGKSTVAKIIAKDFGFTYL 32
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 242
Score = 29.3 bits (65), Expect = 2.2
Identities = 14/70 (20%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 19 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 78
G+T + + V LG + + T ++ +S +K+ ++ ++ + ++G TADA ++++
Sbjct: 25 LGSTAIGIATKEGVVLGVEKRATSP-LLESDSIEKIVEIDRH-IGCAMSGLTADARSMIE 82
Query: 79 FFEANLEKHQ 88
H
Sbjct: 83 HARTAAVTHN 92
Score = 29.3 bits (65), Expect = 2.2
Identities = 14/70 (20%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 617 QGTTILSVRRGNKVSLGGDGQVTFGNVIMKNSAKKVRKLYQNQVLAGIAGSTADAFTLLD 676
G+T + + V LG + + T ++ +S +K+ ++ ++ + ++G TADA ++++
Sbjct: 25 LGSTAIGIATKEGVVLGVEKRATSP-LLESDSIEKIVEIDRH-IGCAMSGLTADARSMIE 82
Query: 677 FFEANLEKHQ 686
H
Sbjct: 83 HARTAAVTHN 92
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 29.2 bits (64), Expect = 2.3
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+++G VGKT +
Sbjct: 6 CVVVGDGAVGKTCLLISYTT 25
Score = 29.2 bits (64), Expect = 2.3
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+++G VGKT +
Sbjct: 6 CVVVGDGAVGKTCLLISYTT 25
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 28.8 bits (63), Expect = 2.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 221 ILMIGPTGVGKTEIARRL 238
IL++G G GKT I RL
Sbjct: 20 ILILGLDGAGKTTILYRL 37
Score = 28.8 bits (63), Expect = 2.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 819 ILMIGPTGVGKTEIARRL 836
IL++G G GKT I RL
Sbjct: 20 ILILGLDGAGKTTILYRL 37
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 212
Score = 29.0 bits (63), Expect = 2.6
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 217 TPKNILMIGPTG-VGKTEIARRLAK 240
TPK +L+ G TG G+ + R+
Sbjct: 1 TPKRVLLAGATGLTGE-HLLDRILS 24
Score = 29.0 bits (63), Expect = 2.6
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 815 TPKNILMIGPTG-VGKTEIARRLAK 838
TPK +L+ G TG G+ + R+
Sbjct: 1 TPKRVLLAGATGLTGE-HLLDRILS 24
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 28.6 bits (63), Expect = 2.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+L+IG +GVGKT + R ++
Sbjct: 9 LLLIGDSGVGKTCVLFRFSE 28
Score = 28.6 bits (63), Expect = 2.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+L+IG +GVGKT + R ++
Sbjct: 9 LLLIGDSGVGKTCVLFRFSE 28
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 28.8 bits (63), Expect = 2.7
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 220 NILMIGPTGVGKTEIARRLAK 240
+ ++G GK+ + R
Sbjct: 7 RLGVLGDARSGKSSLIHRFLT 27
Score = 28.8 bits (63), Expect = 2.7
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 818 NILMIGPTGVGKTEIARRLAK 838
+ ++G GK+ + R
Sbjct: 7 RLGVLGDARSGKSSLIHRFLT 27
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 29.1 bits (64), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 221 ILMIGPTGVGKTEIARRLAK 240
+L+IG +GVGK+ + R +
Sbjct: 9 LLLIGNSGVGKSCLLLRFSD 28
Score = 29.1 bits (64), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 819 ILMIGPTGVGKTEIARRLAK 838
+L+IG +GVGK+ + R +
Sbjct: 9 LLLIGNSGVGKSCLLLRFSD 28
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 28.8 bits (63), Expect = 2.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 221 ILMIGPTGVGKTEIARRLAKL 241
I++ G GVGKT + +++ +
Sbjct: 3 IIITGEPGVGKTTLVKKIVER 23
Score = 28.8 bits (63), Expect = 2.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 819 ILMIGPTGVGKTEIARRLAKL 839
I++ G GVGKT + +++ +
Sbjct: 3 IIITGEPGVGKTTLVKKIVER 23
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus
[TaxId: 274]}
Length = 212
Score = 28.5 bits (63), Expect = 3.8
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 328 IFRKRLREGALDNKEIEIELND 349
R RLRE A +++ D
Sbjct: 178 KIRARLREVAYLVAGLKLVFQD 199
Score = 28.5 bits (63), Expect = 3.8
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 926 IFRKRLREGALDNKEIEIELND 947
R RLRE A +++ D
Sbjct: 178 KIRARLREVAYLVAGLKLVFQD 199
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 28.6 bits (63), Expect = 3.8
Identities = 20/206 (9%), Positives = 59/206 (28%), Gaps = 8/206 (3%)
Query: 241 LSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVI 300
++A + F G ++++ ++ + ++E K + R I
Sbjct: 54 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 113
Query: 301 DILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPP 360
L+ T N R + + G + G +E++ P
Sbjct: 114 RALIIGIPNVGKSTLIN--------RLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTP 165
Query: 361 GMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQN 420
G+ + + + + I + + + + E ++ ++ + ++
Sbjct: 166 GILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED 225
Query: 421 GIIFLDEIDKITTRSSQNNNTDISRA 446
D I + + +
Sbjct: 226 IAELFDAIGEKRGCLMSGGLINYDKT 251
Score = 28.6 bits (63), Expect = 3.8
Identities = 20/206 (9%), Positives = 59/206 (28%), Gaps = 8/206 (3%)
Query: 839 LSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVI 898
++A + F G ++++ ++ + ++E K + R I
Sbjct: 54 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 113
Query: 899 DILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMSPP 958
L+ T N R + + G + G +E++ P
Sbjct: 114 RALIIGIPNVGKSTLIN--------RLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTP 165
Query: 959 GMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQN 1018
G+ + + + + I + + + + E ++ ++ + ++
Sbjct: 166 GILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED 225
Query: 1019 GIIFLDEIDKITTRSSQNNNTDISRA 1044
D I + + +
Sbjct: 226 IAELFDAIGEKRGCLMSGGLINYDKT 251
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 28.0 bits (61), Expect = 4.2
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 254
+ +G GKT + ++L A I+ K
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKH 38
Score = 28.0 bits (61), Expect = 4.2
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKF 852
+ +G GKT + ++L A I+ K
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKH 38
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 28.4 bits (62), Expect = 4.4
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 255
I + G T GK+ + ++ +L + +
Sbjct: 5 IGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVV 39
Score = 28.4 bits (62), Expect = 4.4
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFT 853
I + G T GK+ + ++ +L + +
Sbjct: 5 IGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVV 39
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 27.6 bits (60), Expect = 5.2
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 5/141 (3%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNA----PFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 275
++++G VGK+ + RL A E+ G + +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 276 IKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLRE 335
E + RT E D V+ +L S D N + K
Sbjct: 62 TNDLVERLGIE-RTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDVV 120
Query: 336 GALDNKEIEIELNDTGPHMEI 356
++ +EI+ +L ++I
Sbjct: 121 EKINEEEIKNKLGTDRHMVKI 141
Score = 27.6 bits (60), Expect = 5.2
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 5/141 (3%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNA----PFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 873
++++G VGK+ + RL A E+ G + +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 874 IKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLRE 933
E + RT E D V+ +L S D N + K
Sbjct: 62 TNDLVERLGIE-RTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDVV 120
Query: 934 GALDNKEIEIELNDTGPHMEI 954
++ +EI+ +L ++I
Sbjct: 121 EKINEEEIKNKLGTDRHMVKI 141
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.1 bits (61), Expect = 5.3
Identities = 21/177 (11%), Positives = 45/177 (25%), Gaps = 19/177 (10%)
Query: 218 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 277
P +L+ G G GKT K ++ + V+ ++
Sbjct: 9 PFTVLIEGNIGSGKTTYLNHFEK------------YKNDICLLTEPVEKWRNVNGVNLLE 56
Query: 278 QTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGA 337
+ + P+ +K E + S R F + +R
Sbjct: 57 LMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKK-----LKIMERSIFSARYCFVENMRRNG 111
Query: 338 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKL 394
+ + L + +E + + + R + R + L
Sbjct: 112 SLEQGMYNTLEEWYKFIEESIHVQADLII--YLRTSPEVAYERIRQRARSEESCVPL 166
Score = 28.1 bits (61), Expect = 5.3
Identities = 21/177 (11%), Positives = 45/177 (25%), Gaps = 19/177 (10%)
Query: 816 PKNILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIK 875
P +L+ G G GKT K ++ + V+ ++
Sbjct: 9 PFTVLIEGNIGSGKTTYLNHFEK------------YKNDICLLTEPVEKWRNVNGVNLLE 56
Query: 876 QTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIFRKRLREGA 935
+ + P+ +K E + S R F + +R
Sbjct: 57 LMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKK-----LKIMERSIFSARYCFVENMRRNG 111
Query: 936 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKL 992
+ + L + +E + + + R + R + L
Sbjct: 112 SLEQGMYNTLEEWYKFIEESIHVQADLII--YLRTSPEVAYERIRQRARSEESCVPL 166
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 28.1 bits (62), Expect = 6.2
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 11/79 (13%)
Query: 181 LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 240
L+ Y+ R + + L +R P I + G VGK+ AR L
Sbjct: 54 LNFYISSNLRRQAVLEQFLGTNGQRI-----------PYIISIAGSVAVGKSTTARVLQA 102
Query: 241 LSNAPFIKIEATKFTEVGY 259
L + T G+
Sbjct: 103 LLSRWPEHRRVELITTDGF 121
Score = 28.1 bits (62), Expect = 6.2
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 11/79 (13%)
Query: 779 LDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAK 838
L+ Y+ R + + L +R P I + G VGK+ AR L
Sbjct: 54 LNFYISSNLRRQAVLEQFLGTNGQRI-----------PYIISIAGSVAVGKSTTARVLQA 102
Query: 839 LSNAPFIKIEATKFTEVGY 857
L + T G+
Sbjct: 103 LLSRWPEHRRVELITTDGF 121
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 28.0 bits (62), Expect = 6.2
Identities = 9/36 (25%), Positives = 12/36 (33%), Gaps = 3/36 (8%)
Query: 220 NILMI---GPTGVGKTEIARRLAKLSNAPFIKIEAT 252
+L I G G+GKT A +I
Sbjct: 4 GVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLI 39
Score = 28.0 bits (62), Expect = 6.2
Identities = 9/36 (25%), Positives = 12/36 (33%), Gaps = 3/36 (8%)
Query: 818 NILMI---GPTGVGKTEIARRLAKLSNAPFIKIEAT 850
+L I G G+GKT A +I
Sbjct: 4 GVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLI 39
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 27.7 bits (60), Expect = 6.5
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 225 GPTGVGKTEIARRLAKLSNAPFIKIEATKF 254
G G GK + +L+ A + F
Sbjct: 7 GVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36
Score = 27.7 bits (60), Expect = 6.5
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 823 GPTGVGKTEIARRLAKLSNAPFIKIEATKF 852
G G GK + +L+ A + F
Sbjct: 7 GVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 27.4 bits (59), Expect = 7.3
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 225 GPTGVGKTEIARRLAKLSNAPFIK 248
G + GKT +A +L++ I
Sbjct: 29 GLSRSGKTTLANQLSQTLREQGIS 52
Score = 27.4 bits (59), Expect = 7.3
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 823 GPTGVGKTEIARRLAKLSNAPFIK 846
G + GKT +A +L++ I
Sbjct: 29 GLSRSGKTTLANQLSQTLREQGIS 52
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.4 bits (59), Expect = 7.3
Identities = 11/84 (13%), Positives = 24/84 (28%)
Query: 220 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 279
+++ G GK+ + LA A I T + + + +++
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 280 REFEINKVRTRAEDAAEDRVIDIL 303
+ RA E +
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLF 86
Score = 27.4 bits (59), Expect = 7.3
Identities = 11/84 (13%), Positives = 24/84 (28%)
Query: 818 NILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQT 877
+++ G GK+ + LA A I T + + + +++
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 878 REFEINKVRTRAEDAAEDRVIDIL 901
+ RA E +
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLF 86
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 27.4 bits (61), Expect = 9.1
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 221 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 273
I + G GVGKT + L N + F VG R+ + + ++I+
Sbjct: 71 IGLFGGAGVGKTVLIMELIN--NVAKAHGGYSVFAGVGERTREGNDLYHEMIE 121
Score = 27.4 bits (61), Expect = 9.1
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 819 ILMIGPTGVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLID 871
I + G GVGKT + L N + F VG R+ + + ++I+
Sbjct: 71 IGLFGGAGVGKTVLIMELIN--NVAKAHGGYSVFAGVGERTREGNDLYHEMIE 121
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.364
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,151,266
Number of extensions: 204206
Number of successful extensions: 1184
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1146
Number of HSP's successfully gapped: 422
Length of query: 1165
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1070
Effective length of database: 1,103,246
Effective search space: 1180473220
Effective search space used: 1180473220
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.8 bits)