BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2395
(570 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
arsenicoxydans]
Length = 361
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 251/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL EL+ LL Q++ +N+ +Y K REH+ L P+V LY NY + +
Sbjct: 2 MKPSMLAKLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADN 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D +M+ FA +E+ AK R+ +EL+++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 62 DIKDAQGMLSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ERN W+ E++S S SE+GGYKE+I RI+G YSKLKFESG
Sbjct: 122 GDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ED+NINPADLRIDTYRASGAGGQHINKT
Sbjct: 182 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LREQQS A R+ LIGS
Sbjct: 242 DSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSERIRTY 311
>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
gi|166223564|sp|A6SUF6.1|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
Length = 360
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/310 (65%), Positives = 251/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL EL+ LL Q++ +N+ +Y K REH+ L P+V LY NY++ +
Sbjct: 1 MKPSMLAKLDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D +M+ FA +EI AK R+ +E++++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DIQDAQGMLSDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ E++S S SE+GGYKE+I RIIG YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ED+NINPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LREQQS A R+ LIGS
Sbjct: 241 DSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
Length = 356
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/306 (65%), Positives = 249/306 (81%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML+KL++ ++RL EL+ LL Q++ +N+ +Y K REH+ L P+V LY NY + + DI
Sbjct: 1 MLAKLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKD 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+ ML+D +M+ FA +E+ AK R+ +EL+++K++LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 61 AQGMLSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY RF+ERN W+ E++S S SE+GGYKE+I RI+G YSKLKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADE+ED+NINPADLRIDTYRASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITHIPTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LREQQS A R+ LIGS +
Sbjct: 241 RITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|445494095|ref|ZP_21461139.1| peptide chain release factor 1 [Janthinobacterium sp. HH01]
gi|444790256|gb|ELX11803.1| peptide chain release factor 1 [Janthinobacterium sp. HH01]
Length = 371
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/310 (65%), Positives = 250/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ + RL ELD LL + NN+ Y K REH+ L P+V LY +Y++
Sbjct: 14 MKPSMLAKLDQLANRLVELDELLMSEGATNNMDAYRKMTREHAELGPLVALYKSYQEAIG 73
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D EM++FA DEI AK R+ ++ELE++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 74 DLAAAQEMLGDPEMKDFAQDEIEAAKTRLAELELELQKMLLPKDANDERNIFLEIRAGTG 133
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ERN W+ E++S S S++GGY+E+I R+IG +VYSKLKFESG
Sbjct: 134 GDESALFAGDLLRMYTRFAERNRWQVEVVSESASDLGGYREVIVRLIGNSVYSKLKFESG 193
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ED+NINPADLRIDTYRASGAGGQHINKT
Sbjct: 194 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 253
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA A+++L RIKD +LREQQS A R+ LIGS
Sbjct: 254 DSAVRITHLPTGIVVECQDDRSQHKNKAQAMRVLATRIKDVQLREQQSKEAATRKSLIGS 313
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 314 GDRSERIRTY 323
>gi|398832820|ref|ZP_10590970.1| peptide chain release factor 1 [Herbaspirillum sp. YR522]
gi|398222599|gb|EJN08969.1| peptide chain release factor 1 [Herbaspirillum sp. YR522]
Length = 359
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 253/310 (81%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ S+RL+EL+ LL Q++ ++ Y K REH+ L P+V LY++Y +
Sbjct: 1 MKPSMLAKLDQLSERLEELNSLLAQEDATASMDVYRKMTREHAELGPLVALYHDYVQAGA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+L+D +M++FA DEI+ A+ R+ +E +++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIGTAQELLSDPDMKDFAQDEIDAARARMAALEGDLQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S SE+GGYKE+IARI GL YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERMRWQVEIVSASESELGGYKEVIARIAGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ED++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA A+K+L ARIKD +LR+QQS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|399019154|ref|ZP_10721303.1| peptide chain release factor 1 [Herbaspirillum sp. CF444]
gi|398098301|gb|EJL88588.1| peptide chain release factor 1 [Herbaspirillum sp. CF444]
Length = 356
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/306 (64%), Positives = 250/306 (81%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML+KL++ ++RL+EL+ LL Q++ +++ +Y K REH+ L P+V LY+ Y + DI T
Sbjct: 1 MLAKLDQLAERLEELNNLLMQEDATSDMDNYRKMTREHAELGPLVALYHTYSQAANDIAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L+D +M+ FA +EIN AK R+ +E +++K++LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 61 AQELLSDPDMKEFAQEEINGAKARMEALEGDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY RF+ERN W+ E++S S SEIGGYKE+I RI G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRFAERNRWQVEMMSASESEIGGYKEVIVRIAGFGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADE+ED++INPAD+RIDTYRASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEVEDVDINPADIRIDTYRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LREQQS A R+ LIGS +
Sbjct: 241 RITHMPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|409408061|ref|ZP_11256505.1| peptide chain release factor 1 [Herbaspirillum sp. GW103]
gi|386432517|gb|EIJ45344.1| peptide chain release factor 1 [Herbaspirillum sp. GW103]
Length = 355
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/306 (64%), Positives = 252/306 (82%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML+KL++ ++RL+EL+ LL Q++ ++ ++ K REH+ L P+V LY++Y + +EDI T
Sbjct: 1 MLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHDYVQASEDIRT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A E+L+D +M+ FA +EI+ A+ R+ +EL+++K++LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 61 AGELLSDPDMKAFAQEEIDAARARMEALELDLQKMLLPKDPNDERNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S SE+GGYKE+IARI G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIAGFGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADE+ED++INPADLRIDTYRASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIVV+CQ+DRSQHKNKA A+K+L ARIKD +LREQQS A R+ LIGS +
Sbjct: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|415942784|ref|ZP_11555980.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
gi|407758794|gb|EKF68568.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
Length = 355
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 253/306 (82%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML+KL++ ++RL+EL+ LL Q++ N+ ++ K REH+ L P+V LY++Y + +DI T
Sbjct: 1 MLAKLDQLAERLEELNSLLAQEDATANMDNFRKMTREHAELGPLVALYHDYVQAGDDIRT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L+D +M+ FA +EI+ AK R+ +EL+++K++LP+D ND+RNIF+EIRAGTGGDES
Sbjct: 61 AQELLSDPDMKAFAQEEIDGAKARMEALELDLQKMLLPRDPNDERNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S SE+GGYKE+IARI+G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSSSESELGGYKEVIARIVGFGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADE+ED++INPAD+RIDTYRASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEVEDVDINPADIRIDTYRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIVV+CQ+DRSQHKNKA A+K+L ARIKD +LREQQS A R+ LIGS +
Sbjct: 241 RITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
seropedicae SmR1]
Length = 359
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/310 (63%), Positives = 252/310 (81%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL+EL+ LL Q++ ++ ++ K REH+ L P+V LY+ Y + E
Sbjct: 1 MKPSMLAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+L D +M+ FA +EI+ AK R+ +EL+++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIRTAQELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ D+ INPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA A+K+L ARIKD +LR+QQS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|395760366|ref|ZP_10441035.1| peptide chain release factor 1 [Janthinobacterium lividum PAMC
25724]
Length = 358
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/310 (63%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ + RL ELD LL + +N+ Y K REH+ L P+V LY Y++ +
Sbjct: 1 MKPSMLAKLDQLANRLVELDELLMHPDATSNMDSYRKMTREHAELGPLVALYRCYQEAGD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EML D +M+ FA +EI AK + +E E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DITTAQEMLGDPDMKQFAQEEIEAAKATMARLERELQTMLLPKDVNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ERN W+ E++S S S++GGY+E+I R++G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYSRFAERNRWQVELVSSSDSDLGGYREVIVRVVGNGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ED+NINPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA A+K+L ARIKD +LREQQS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|427399863|ref|ZP_18891101.1| peptide chain release factor 1 [Massilia timonae CCUG 45783]
gi|425721140|gb|EKU84054.1| peptide chain release factor 1 [Massilia timonae CCUG 45783]
Length = 358
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/310 (62%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML KL++ + RL ELD LL + N+ Y K REH+ L P+V +Y Y+
Sbjct: 1 MKPSMLFKLDQLANRLVELDELLMSEGATANMDSYRKMTREHAELTPLVGVYCQYQGALA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D +M++FA +EI AK+R+ +ELE++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DTEAARELLQDPDMKDFAQEEIEAAKERMAGLELELQKMLLPKDANDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ERN W+ E++S S S++GGY+E+I R++G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAERNRWQVEMVSESPSDLGGYREVIVRVVGHGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ED++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQHKNKA A+K+L AR+KD++LREQQS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHKNKASAMKVLAARLKDAQLREQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
IMCC9480]
gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
IMCC9480]
Length = 360
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/310 (62%), Positives = 249/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML KL++ + RL EL+ LLTQ+++ +++ +Y K REH+ L P+VELY++++
Sbjct: 1 MKPSMLVKLDQLADRLGELNELLTQEDLASDMDNYRKLTREHAELGPLVELYDSFRVAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA +ML D +M++FA +EI A+ R IE +++ ++LPKD ND+RN+F+EIRAGTG
Sbjct: 61 DIATAHDMLADPDMKDFAQEEILAARARTEQIEADLQTMLLPKDPNDERNLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ERN W+ E++S S S++GGYKE+I R+IG YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRVIGNGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DEI D++INP+DLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPTTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA ALK+L ARIKD+++REQQS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKASALKVLAARIKDAQVREQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
Length = 360
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/310 (61%), Positives = 251/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KLE S RL E+D LL Q EV ++ ++Y K REH+ L P+V LY ++ ++ +
Sbjct: 1 MKPSMLAKLEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EML D EM+ FA EI+ A+K+I IE E++ ++LPKD +D +NI++EIRAGTG
Sbjct: 61 DIDTAREMLADPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+E+N WK EI+S S+SE+GGY+E+I R++G +VYS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEAD++ D++INPAD+R+DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA A+++L ARIKD +++EQQ+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|312795903|ref|YP_004028825.1| peptide chain release factor 1 (RF-1) [Burkholderia rhizoxinica HKI
454]
gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
rhizoxinica HKI 454]
Length = 365
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KLE+ +KRL EL+ LL++++V +++ Y K REH+ L P+VE Y +K
Sbjct: 6 MKPSMQAKLEQLTKRLPELNELLSREDVTSDLDQYRKLTREHAELAPVVEQYAQWKTARN 65
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA DE+N A+ R+ +E +++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 66 DEATAQELLTDPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIRAGTG 125
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER+ W+ E++S S S++GGYKE+I RIIG YS+LKFESG
Sbjct: 126 GDESALFAGDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLKFESG 185
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI +I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 186 GHRVQRVPATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQHINKT 245
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNK A+K+L ARIKD + +EQ + A R+ L+GS
Sbjct: 246 DSAVRITHLPTGIVVECQDDRSQHKNKDRAMKVLAARIKDKQYQEQHAKEAATRKSLVGS 305
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 306 GDRSERIRTY 315
>gi|340789095|ref|YP_004754560.1| peptide chain release factor 1 [Collimonas fungivorans Ter331]
gi|340554362|gb|AEK63737.1| Peptide chain release factor 1 [Collimonas fungivorans Ter331]
Length = 360
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/310 (62%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ + RL E+ LL Q++ ++ Y K REH+ L P+VELY Y + +
Sbjct: 1 MKPSMLAKLDQLANRLVEVGDLLMQEDATASMDSYRKLTREHAELGPLVELYQAYLQADA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EM +D +M+ FA DEI AK R+ ++ +++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIAAAQEMQSDPDMKEFAQDEIVAAKARMEQLQGDLQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ERN W+ E++S S SE+GGYKE+I R+IG YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAERNRWQVEMVSESSSEVGGYKEVIVRVIGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ D++INPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAIMPEADEVGDVDINPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LR QQS A R+ LIGS
Sbjct: 241 DSAVRITHMPTGIVVECQDDRSQHKNKASALKVLAARIKDGQLRAQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
Length = 358
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|394989620|ref|ZP_10382453.1| peptide chain release factor 1 [Sulfuricella denitrificans skB26]
gi|393791120|dbj|GAB72092.1| peptide chain release factor 1 [Sulfuricella denitrificans skB26]
Length = 360
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKL++ ++RL EL L+ + +++ +Y + REH+ + P+VELY +++ +
Sbjct: 1 MKPSIQSKLDQLAERLVELTQRLSSNDATSDMDNYRRLTREHAEITPVVELYQRFQQAEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D EM+ FA DE N AK+++ IE++++KL+LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DLKTAQEMLADPEMKAFAEDEANSAKEQLAQIEIDLQKLLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W EI+S S E+GGYKEIIA+I+G YSKLKFESG
Sbjct: 121 GDESALFSGDLFRMYARYAERQRWNVEILSESSGEMGGYKEIIAKIVGQGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ ++N+NPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAIMPEADELAEVNLNPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNK+ A+ +L ARI D +LRE+QS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKSQAMSVLAARIMDGQLRERQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
Length = 358
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY++
Sbjct: 1 MKPSIIEKLQQLSDRLEEVTSLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
Length = 360
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/300 (62%), Positives = 244/300 (81%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KLE+ + RL E+D LL Q +V ++ +Y K +EH+ L P+V LYN+Y ++
Sbjct: 1 MKPSMLAKLEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D EM+ FA +EI+ A+ ++ IE +++ ++LPKD ND +NIF+EIRAGTG
Sbjct: 61 DVDAAQEMLADPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+E+N WK EI+S S SE+GGY+E+I R+IG +VYS+LKFESG
Sbjct: 121 GDESALFAADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEAD++ D++INPAD+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH PTGIVV+CQ+DRSQHKNKA A+++L ARIKD +++EQ + A R+ LIGS
Sbjct: 241 DSAIRITHFPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQHAKEAATRKSLIGS 300
>gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
gi|238689472|sp|B2SZ27.1|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
Length = 360
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+V+ Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA DEI A++R+ + E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DATTAQELLADASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
gi|238691299|sp|B2JHK8.1|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
Length = 360
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL++ + RL EL+ LL+++++ +NI Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQAKLDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D M++FA +EI +++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
Length = 360
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEQYALWRQAMH 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D+ MR FA +EI A++R+ + E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLTDISMREFAEEEIRAARERMEQLGGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 358
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL++ S RL+E+ LL E +++ +Y K REH+ + P+VE ++ Y +
Sbjct: 1 MKPTIIEKLQQLSDRLEEVTALLGSPEATSDMGNYRKLTREHAEITPVVETFHQYMQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DMAEAQEMLSDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
gi|119361516|sp|Q39K18.1|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
383]
Length = 360
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L DL MR+FA DEI A++ + +E E++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DETAAQELLGDLSMRDFAEDEIRSARESMSRLETELQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
Length = 360
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ N+ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVEHYGLWRQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A+ R+ + +E++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DAATAQELLADASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGY+E+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|416919344|ref|ZP_11932527.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
Length = 360
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++R+ +E+E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLGDPSMRDFAEDEIRSARERMVRLEVELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
gi|119361518|sp|Q13TU2.1|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
xenovorans LB400]
Length = 360
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A++R+ + E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
Length = 360
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/310 (61%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNELLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A+ R+ +ELE++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160]
gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160]
Length = 360
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ N+ Y K REH+ L P+V+ Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVDQYGLWRQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A+ R+ + +E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLTDASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGY+E+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
gi|238691828|sp|B2UDM7.1|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
Length = 360
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V + +K+ E
Sbjct: 1 MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+ D +M+ FA DE+ A++R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 61 DIATAQELAADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000]
gi|20139328|sp|Q8XVD0.1|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum GMI1000]
Length = 360
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ +
Sbjct: 1 MKPSMLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E+L D +M+ FA DEI A++R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 61 DVTTAQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I R++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957]
gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957]
Length = 356
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 238/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ +D+ T
Sbjct: 1 MLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEDDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DE+ A++R+ +E E+++L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|402567760|ref|YP_006617105.1| peptide chain release factor 1 [Burkholderia cepacia GG4]
gi|402248957|gb|AFQ49411.1| peptide chain release factor 1 [Burkholderia cepacia GG4]
Length = 360
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYTLWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+++L D MR+FA DEI A++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQDLLADASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
solanacearum UW551]
gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
solanacearum UW551]
Length = 374
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+
Sbjct: 15 MKPSMLSKLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAEN 74
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E+L D +M+ FA DE+ +A+ R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 75 DVATAQELLADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTG 134
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 135 GDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESG 194
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 195 GHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKT 254
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 255 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 314
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 315 GDRSDRIRTY 324
>gi|421890573|ref|ZP_16321430.1| peptide chain release factor RF-1 [Ralstonia solanacearum K60-1]
gi|378964075|emb|CCF98178.1| peptide chain release factor RF-1 [Ralstonia solanacearum K60-1]
Length = 356
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 238/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ +D+ T
Sbjct: 1 MLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DE+ A++R+ +E E+++L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|390568973|ref|ZP_10249262.1| peptide chain release factor 1 [Burkholderia terrae BS001]
gi|389939099|gb|EIN00939.1| peptide chain release factor 1 [Burkholderia terrae BS001]
Length = 360
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL++ + RL EL+ LL+++++ NI Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQAKLDQLTTRLAELNDLLSREDITTNIDQYRKLTREHAELQPVVEHYALWRQSMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D M++FA +EI A+ ++ +E E++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DAATAQELLSDASMKDFAEEEIRAARDQMEKLEGELQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGDAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|407714872|ref|YP_006835437.1| peptide chain release factor 1 [Burkholderia phenoliruptrix
BR3459a]
gi|407237056|gb|AFT87255.1| peptide chain release factor 1 [Burkholderia phenoliruptrix
BR3459a]
Length = 360
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQHKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMH 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A+ R+ + E++ ++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLTDASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
Length = 360
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y + REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|344172583|emb|CCA85227.1| peptide chain release factor RF-1 [Ralstonia syzygii R24]
Length = 356
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 239/306 (78%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V Y +K+ ED+ T
Sbjct: 1 MLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEEDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DEI A++R+ +E E+++L+LPK+ ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKNPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ E++S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
gi|122324144|sp|Q0BIQ0.1|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238689166|sp|B1YSD5.1|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
ambifaria AMMD]
gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
Length = 360
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y + REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++R+ +E E++K++LPKD ND RNIF+EIRAG G
Sbjct: 61 DETAAQELLADASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
gi|119361585|sp|Q46WS9.1|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
eutropha JMP134]
Length = 360
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL+E++ LL +++ NI Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASMLAKLDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM++FA DEI A++R+ +E ++KL+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY RF+ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ D+ INP+DLRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD ++R Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQMRAAQAKEASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
gi|421471767|ref|ZP_15920023.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
BAA-247]
gi|421476378|ref|ZP_15924266.1| peptide chain release factor 1 [Burkholderia multivorans CF2]
gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
gi|400224691|gb|EJO54908.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
BAA-247]
gi|400228454|gb|EJO58388.1| peptide chain release factor 1 [Burkholderia multivorans CF2]
Length = 360
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA +EI A++R+ +E+E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|385207918|ref|ZP_10034786.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
gi|385180256|gb|EIF29532.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
Length = 356
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 239/306 (78%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++ D T
Sbjct: 1 MQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D MR+FA +EI A++R+ + E++K++LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG HRV
Sbjct: 121 ALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS +
Sbjct: 241 RVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
gi|404397646|ref|ZP_10989436.1| peptide chain release factor 1 [Ralstonia sp. 5_2_56FAA]
gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
gi|348612583|gb|EGY62197.1| peptide chain release factor 1 [Ralstonia sp. 5_2_56FAA]
Length = 360
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V + +K+ E
Sbjct: 1 MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+ D +M+ FA DE+ A++R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 61 DIATAQELAADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 ESAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|339483355|ref|YP_004695141.1| peptide chain release factor 1 [Nitrosomonas sp. Is79A3]
gi|338805500|gb|AEJ01742.1| Peptide chain release factor 1 [Nitrosomonas sp. Is79A3]
Length = 359
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/303 (61%), Positives = 237/303 (78%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L + S RL+EL+ LL+ + V +N+ +Y K REH+ + PIVELY Y+ DI TA+E
Sbjct: 8 RLTRLSVRLEELNQLLSSESVTSNLDNYRKLTREHAEIVPIVELYRAYQLSERDIQTARE 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
M DLEMR+FA EI K+++ +E EI+K +LPKD ND+RNIF+EIRAGTGGDESALF
Sbjct: 68 MHADLEMRSFAEAEIQAGKEKLVKLESEIQKQLLPKDPNDERNIFLEIRAGTGGDESALF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
+L RMY R++ER W+ EIIS+SLSEIGGYKEIIA+IIG YS+LKFESG HRVQRV
Sbjct: 128 AGNLFRMYSRYAERRSWQVEIISQSLSEIGGYKEIIAKIIGQGAYSRLKFESGGHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TETQGR+HTS CTVAV+PEADE+ ++ +NPA+LRIDTYRASGAGGQHINKTDSAVRIT
Sbjct: 188 PVTETQGRVHTSTCTVAVMPEADEVSEVVLNPAELRIDTYRASGAGGQHINKTDSAVRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTGIVV+CQ+ RSQHKNKA AL +L ARI D ++R Q + A R+ L+G+ ++ +
Sbjct: 248 HLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQMRAQHAEQAATRKSLVGTGERSERI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
Length = 360
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A++R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu]
Length = 360
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+V Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A+ R+ +E+E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLGDASMRDFAEDEIRSARDRMVQLEVELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|420254153|ref|ZP_14757170.1| peptide chain release factor 1 [Burkholderia sp. BT03]
gi|398049844|gb|EJL42242.1| peptide chain release factor 1 [Burkholderia sp. BT03]
Length = 398
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 239/300 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL++ + RL EL+ LL+++++ NI Y K REH+ L P+VE Y +++
Sbjct: 39 MKTSMQAKLDQLTTRLAELNDLLSREDITTNIDQYRKLTREHAELQPVVEHYALWRQSMN 98
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D M++FA +EI A+ ++ +E E++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 99 DAATAQELLSDASMKDFAEEEIRAARDQMEKLEGELQKMLLPKDPNDERNIFLEIRAGTG 158
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 159 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGDAAYSKLKFESG 218
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 219 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 278
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 279 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 338
>gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC
25196]
gi|119361568|sp|Q2Y5P3.1|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira
multiformis ATCC 25196]
Length = 358
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M M +KL + S RL+EL+ LL+ + + N+ Y K RE + + P+V+LYN Y + +
Sbjct: 1 MNKSMTAKLTQLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EM + EMR FA EI AK+R+ E++K +LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIHTAQEMAAEAEMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY RF+ER W+ EIIS+S S++GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAADLFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEIED+ +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+ RSQHKNKA A+ +L ARI+D +++EQQS A R+ L+G+
Sbjct: 241 DSAVRITHLPTGIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQEQQSKQAATRKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GNRSGRIRTY 310
>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
gi|119361514|sp|Q1BSB1.1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223531|sp|A0K437.1|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238688554|sp|B1JUS4.1|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
cenocepacia AU 1054]
gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
cenocepacia HI2424]
gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
Length = 360
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
Length = 360
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A++R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLGDASMRDFAEDELRGARERMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
gi|421863976|ref|ZP_16295664.1| Peptide chain release factor 1 [Burkholderia cenocepacia H111]
gi|238693068|sp|B4E6U6.1|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
gi|358075929|emb|CCE46542.1| Peptide chain release factor 1 [Burkholderia cenocepacia H111]
Length = 360
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|344169089|emb|CCA81413.1| peptide chain release factor RF-1 [blood disease bacterium R229]
Length = 360
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V Y +K+ +
Sbjct: 1 MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E+L D +M+ FA DEI A++R+ +E E+++L+LPK+ ND RNIF+EIRAG G
Sbjct: 61 DVATAQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKNPNDHRNIFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ E++S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|386332275|ref|YP_006028444.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum Po82]
gi|421895781|ref|ZP_16326180.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum MolK2]
gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum MolK2]
gi|334194723|gb|AEG67908.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum Po82]
Length = 356
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 237/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ D+ T
Sbjct: 1 MLSKLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVAQYAVWKQAENDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DE+ +A+ R+ +E E+++L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
gi|119361559|sp|Q1GYE8.1|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
flagellatus KT]
Length = 360
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/310 (61%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M+ KL S+RL EL+ LL+ ++V N+I +Y K REH+ + PIVE + Y++
Sbjct: 1 MKPSMIKKLATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEI 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML D EM+ FA +E K+++ DIE +++KL+LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIKEAQAMLADPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER WK EI+S + SE+GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+ D+ INPAD+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ+ RSQH NKA A+++L ARIK ++ EQQS A RR LIGS
Sbjct: 241 DSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQSKIASERRSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
25259]
gi|119361634|sp|Q3SG10.1|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
25259]
Length = 360
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL + +RL+ELD LL Q EV ++ Y K REH+ L P+V LY YK++
Sbjct: 1 MKATLADKLARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+EML D +MR A E+ RI ++E E++ +LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DQKTAQEMLADADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY R++ER WK EI+S S E+GGYKE+I RI+G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PEA E+ +++INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+N+A A+ +L AR+KD +++ QQ++ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQAQQASEASTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum IPO1609]
gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
solanacearum IPO1609]
Length = 356
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 237/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ D+ T
Sbjct: 1 MLSKLDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DE+ +A+ R+ +E E+++L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
gi|119361517|sp|Q2SUG2.1|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
Length = 360
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A++R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
gi|424907173|ref|ZP_18330664.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
gi|390927530|gb|EIP84939.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
Length = 360
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
Length = 356
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/306 (60%), Positives = 237/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++ D T
Sbjct: 1 MQHKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMHDAAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D MR+FA +EI A+ R+ + E++ ++LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLTDASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG HRV
Sbjct: 121 ALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS +
Sbjct: 241 RVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
13177]
gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
9]
gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
52237]
gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
gi|403520285|ref|YP_006654419.1| peptide chain release factor 1 [Burkholderia pseudomallei BPC006]
gi|61214599|sp|Q63QF0.1|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361515|sp|Q3JN85.1|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223535|sp|A3NZS4.1|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223536|sp|A3NE24.1|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
52237]
gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
9]
gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
gi|403075927|gb|AFR17507.1| peptide chain release factor 1 [Burkholderia pseudomallei BPC006]
Length = 360
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|413959603|ref|ZP_11398837.1| peptide chain release factor 1 [Burkholderia sp. SJ98]
gi|413940186|gb|EKS72151.1| peptide chain release factor 1 [Burkholderia sp. SJ98]
Length = 360
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ +KRL +L+ LL++++V +++ Y K REH+ + PIVE Y +++
Sbjct: 1 MKTSMQGKLDQLAKRLVDLNELLSREDVTSDMDQYRKLTREHAEISPIVEQYALWRQALT 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D MR+FA +EI A++R+ IE E++ ++LPKD ND RNIFIEIRAGTG
Sbjct: 61 DEATAQELLSDPSMRDFAEEEIGEARERMTKIEGELQTMLLPKDPNDDRNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W E +S S+S++GGYKE+I R+ G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWTAETMSESVSDLGGYKEVIVRLAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEISEVVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
Length = 360
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V + +K+ E
Sbjct: 1 MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKRAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+ D +M+ F DE+ A++R+ +E E+++L+LPK+ ND RNIF+EIRAGTG
Sbjct: 61 DIATAQELAADPDMKAFGEDELRAARERMESLEGELQRLLLPKNPNDHRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|404378163|ref|ZP_10983261.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
Length = 358
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E N+ +Y K +EH+ L PIVE Y Y++
Sbjct: 1 MKPSLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAQEMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ EI+S S S++GGYKE+I R+IGL YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 241 DSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|444356343|ref|ZP_21158022.1| peptide chain release factor 1 [Burkholderia cenocepacia BC7]
gi|444373722|ref|ZP_21173065.1| peptide chain release factor 1 [Burkholderia cenocepacia
K56-2Valvano]
gi|443591291|gb|ELT60200.1| peptide chain release factor 1 [Burkholderia cenocepacia
K56-2Valvano]
gi|443607390|gb|ELT75097.1| peptide chain release factor 1 [Burkholderia cenocepacia BC7]
Length = 380
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 21 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 80
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 81 DEAAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 140
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 141 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 200
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 201 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 260
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 261 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 320
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 321 GDRSERIRTY 330
>gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
Length = 360
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQHKLDQLTTRLAELNDLLSREDITSNRDQYRKLTREHAELGPVVEQYALWRQAMH 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR FA +EI A++R+ + +++ ++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLADASMREFAEEEIRAARERMEQLGGKLQTMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
Length = 359
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 236/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
++ +L + S RL EL+ LL+ + ++ Y K REH+ + PIVELY +Y+ D+ T
Sbjct: 5 IMDRLTRLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVELYRSYQHFERDVQT 64
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+EM DL+MR FA EI + K+++ IE EI+K +LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 65 AREMHADLDMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFLEIRAGTGGDES 124
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF +L RMY R++ER W+ EIIS+SLSEIGGYKEIIA+IIG YSKLKFESG HRV
Sbjct: 125 ALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYSKLKFESGGHRV 184
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGR+HTS CTVA++PEADE+ ++ +NPA+LRIDT+RASGAGGQHINKTDSAV
Sbjct: 185 QRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAGGQHINKTDSAV 244
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTGIVV+CQ+ RSQHKNKA AL +L ARI D ++R Q + A R+ L+G+ ++
Sbjct: 245 RVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQMRAQHAEQAAARKSLVGTGERS 304
Query: 305 SPLNIF 310
+ +
Sbjct: 305 ERIRTY 310
>gi|387901185|ref|YP_006331524.1| peptide chain release factor 1 [Burkholderia sp. KJ006]
gi|387576077|gb|AFJ84793.1| Peptide chain release factor 1 [Burkholderia sp. KJ006]
Length = 360
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA +EI A++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADASMRDFAEEEIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
gi|385850774|ref|YP_005897289.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
gi|385852716|ref|YP_005899230.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
gi|416182173|ref|ZP_11611923.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
gi|433465662|ref|ZP_20423135.1| peptide chain release factor 1 [Neisseria meningitidis NM422]
gi|433488865|ref|ZP_20446018.1| peptide chain release factor 1 [Neisseria meningitidis M13255]
gi|433491049|ref|ZP_20448165.1| peptide chain release factor 1 [Neisseria meningitidis NM418]
gi|433505594|ref|ZP_20462528.1| peptide chain release factor 1 [Neisseria meningitidis 9506]
gi|433507677|ref|ZP_20464579.1| peptide chain release factor 1 [Neisseria meningitidis 9757]
gi|433509844|ref|ZP_20466704.1| peptide chain release factor 1 [Neisseria meningitidis 12888]
gi|433511878|ref|ZP_20468695.1| peptide chain release factor 1 [Neisseria meningitidis 4119]
gi|20139351|sp|Q9JY93.1|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
gi|432201307|gb|ELK57389.1| peptide chain release factor 1 [Neisseria meningitidis NM422]
gi|432221940|gb|ELK77742.1| peptide chain release factor 1 [Neisseria meningitidis M13255]
gi|432225995|gb|ELK81729.1| peptide chain release factor 1 [Neisseria meningitidis NM418]
gi|432239749|gb|ELK95296.1| peptide chain release factor 1 [Neisseria meningitidis 9506]
gi|432240115|gb|ELK95658.1| peptide chain release factor 1 [Neisseria meningitidis 9757]
gi|432245146|gb|ELL00618.1| peptide chain release factor 1 [Neisseria meningitidis 12888]
gi|432245905|gb|ELL01368.1| peptide chain release factor 1 [Neisseria meningitidis 4119]
Length = 358
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|349609150|ref|ZP_08888558.1| peptide chain release factor 1 [Neisseria sp. GT4A_CT1]
gi|348612987|gb|EGY62589.1| peptide chain release factor 1 [Neisseria sp. GT4A_CT1]
Length = 358
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY++
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHSNKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
Length = 356
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 238/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V Y +K+ +D+ T
Sbjct: 1 MLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DEI A++R+ +E E+++L+LP++ ND RNIF+EIRAG GGDES
Sbjct: 61 AQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPRNPNDHRNIFLEIRAGAGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ E++S S S++GGYKE+IAR++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 236/306 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL++ ++R E++ LL +++ N+ Y K REH+ + P+V Y +K+ +D+ T
Sbjct: 1 MLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAEIEPVVAQYAAWKQAEDDVTT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D +M+ FA DEI A++ + +E E+++L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADPDMKAFAEDEIRAAREHMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ EI+S S S++GGYKE+I R++G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS +
Sbjct: 241 RLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
NRL30031/H210]
gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
NRL30031/H210]
Length = 358
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|386860344|ref|YP_006273293.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026b]
gi|418375660|ref|ZP_12965713.1| peptide chain release factor 1 [Burkholderia pseudomallei 354a]
gi|418537949|ref|ZP_13103578.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026a]
gi|418545630|ref|ZP_13110882.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258a]
gi|418545824|ref|ZP_13111066.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258b]
gi|418552270|ref|ZP_13117142.1| peptide chain release factor 1 [Burkholderia pseudomallei 354e]
gi|385345548|gb|EIF52246.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258a]
gi|385349119|gb|EIF55710.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026a]
gi|385366179|gb|EIF71816.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258b]
gi|385373349|gb|EIF78400.1| peptide chain release factor 1 [Burkholderia pseudomallei 354e]
gi|385378143|gb|EIF82645.1| peptide chain release factor 1 [Burkholderia pseudomallei 354a]
gi|385657472|gb|AFI64895.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026b]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 235/306 (76%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++ D +
Sbjct: 1 MQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELA 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 61 AQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS +
Sbjct: 241 RVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
gi|61214592|sp|Q62DF3.1|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223532|sp|A3MFT4.1|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223533|sp|A2RYL2.1|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223534|sp|A1UWC9.1|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
Length = 360
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
Length = 360
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML KL S+RL EL+ LL+ ++ +++ +Y K REH+ + PIVE Y Y++
Sbjct: 1 MKPSMLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCEN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A ML D EM+ FA +EI K R+ +I + ++KL+LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DLKEAHAMLADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER WK E++S S SE+GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+ D+ I+PAD+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ+ RSQH NKA A+++L ARIK ++ EQQS A RR LIGS
Sbjct: 241 DSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
gi|238692779|sp|B3R722.1|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
19424]
Length = 360
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL E++ LL +++ NI Y K REH+ L P+ E Y+ Y++ +
Sbjct: 1 MKASMLAKLDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM++FA DEI A+ R+ ++ +++L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ E++S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ ++ INPADLRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD + R Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAREASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
Length = 358
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++I +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
17616]
gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
17616]
gi|238687082|sp|A9AJ68.1|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
17616]
gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC
17616]
Length = 360
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA +EI A++R+ +E+E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ IN ADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491]
gi|421559739|ref|ZP_16005608.1| peptide chain release factor 1 [Neisseria meningitidis 92045]
gi|20139350|sp|Q9JT75.1|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491]
gi|402334738|gb|EJU70017.1| peptide chain release factor 1 [Neisseria meningitidis 92045]
Length = 358
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|416195568|ref|ZP_11617807.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
gi|416212282|ref|ZP_11621849.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
gi|427827316|ref|ZP_18994356.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
Length = 385
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 28 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 87
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 88 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 147
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 148 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 207
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 208 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 267
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 268 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 327
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 328 GDRSERIRTY 337
>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
gi|385340540|ref|YP_005894412.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
gi|416176949|ref|ZP_11609868.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
gi|416190790|ref|ZP_11615901.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
gi|421544981|ref|ZP_15991048.1| peptide chain release factor 1 [Neisseria meningitidis NM140]
gi|421547070|ref|ZP_15993109.1| peptide chain release factor 1 [Neisseria meningitidis NM183]
gi|421549316|ref|ZP_15995333.1| peptide chain release factor 1 [Neisseria meningitidis NM2781]
gi|421553276|ref|ZP_15999241.1| peptide chain release factor 1 [Neisseria meningitidis NM576]
gi|421557699|ref|ZP_16003598.1| peptide chain release factor 1 [Neisseria meningitidis 80179]
gi|433467767|ref|ZP_20425217.1| peptide chain release factor 1 [Neisseria meningitidis 87255]
gi|433493073|ref|ZP_20450160.1| peptide chain release factor 1 [Neisseria meningitidis NM586]
gi|433495189|ref|ZP_20452252.1| peptide chain release factor 1 [Neisseria meningitidis NM762]
gi|433497362|ref|ZP_20454392.1| peptide chain release factor 1 [Neisseria meningitidis M7089]
gi|433499455|ref|ZP_20456460.1| peptide chain release factor 1 [Neisseria meningitidis M7124]
gi|433501391|ref|ZP_20458373.1| peptide chain release factor 1 [Neisseria meningitidis NM174]
gi|433503455|ref|ZP_20460413.1| peptide chain release factor 1 [Neisseria meningitidis NM126]
gi|166223577|sp|A1KV95.1|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
gi|402322042|gb|EJU57512.1| peptide chain release factor 1 [Neisseria meningitidis NM183]
gi|402322268|gb|EJU57732.1| peptide chain release factor 1 [Neisseria meningitidis NM140]
gi|402324138|gb|EJU59575.1| peptide chain release factor 1 [Neisseria meningitidis NM2781]
gi|402328408|gb|EJU63779.1| peptide chain release factor 1 [Neisseria meningitidis NM576]
gi|402333862|gb|EJU69158.1| peptide chain release factor 1 [Neisseria meningitidis 80179]
gi|432201652|gb|ELK57728.1| peptide chain release factor 1 [Neisseria meningitidis 87255]
gi|432226864|gb|ELK82584.1| peptide chain release factor 1 [Neisseria meningitidis NM586]
gi|432228721|gb|ELK84417.1| peptide chain release factor 1 [Neisseria meningitidis NM762]
gi|432232319|gb|ELK87965.1| peptide chain release factor 1 [Neisseria meningitidis M7089]
gi|432233021|gb|ELK88655.1| peptide chain release factor 1 [Neisseria meningitidis M7124]
gi|432233860|gb|ELK89484.1| peptide chain release factor 1 [Neisseria meningitidis NM174]
gi|432239476|gb|ELK95029.1| peptide chain release factor 1 [Neisseria meningitidis NM126]
Length = 358
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
Length = 356
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 232/306 (75%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL S+RL EL+ LL+ ++ +++ +Y K REH+ + PIVE Y Y++ D+
Sbjct: 1 MLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKE 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A ML D EM+ FA +EI K R+ +I + ++KL+LPKD ND+RNIF+EIRAGTGGDES
Sbjct: 61 AHAMLADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY R++ER WK E++S S SE+GGYKEIIA+I G YSKLKFESG HRV
Sbjct: 121 ALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TETQGRIHTSACTVAV+PE DE+ D+ INPAD+RIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH PTGIVV+CQ+ RSQH NKA A+++L ARIK ++ EQQS A RR LIGS +
Sbjct: 241 RITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRSLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|377821776|ref|YP_004978147.1| peptide chain release factor [Burkholderia sp. YI23]
gi|357936611|gb|AET90170.1| peptide chain release factor [Burkholderia sp. YI23]
Length = 360
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ +KR +L+ LL++++V +++ Y K REH+ + PIV+ Y +++
Sbjct: 1 MKTSMQSKLDQLAKRQVDLNDLLSREDVTSDMDQYRKLTREHAEISPIVDQYALWRQALT 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+++L D MR+FA +EI A++R+ IE +++ ++LPKD ND+RNIFIEIRAGTG
Sbjct: 61 DEATAQDLLADPSMRDFAEEEIGEARERMTKIESDLQTMLLPKDPNDERNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W E +S S+S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWTAETMSESVSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEISEVVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102]
gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102]
Length = 358
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
Length = 360
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THI TGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHISTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|385338525|ref|YP_005892398.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
2594]
gi|433476134|ref|ZP_20433470.1| peptide chain release factor 1 [Neisseria meningitidis 88050]
gi|433480334|ref|ZP_20437618.1| peptide chain release factor 1 [Neisseria meningitidis 63041]
gi|433514035|ref|ZP_20470821.1| peptide chain release factor 1 [Neisseria meningitidis 63049]
gi|433516289|ref|ZP_20473053.1| peptide chain release factor 1 [Neisseria meningitidis 2004090]
gi|433518111|ref|ZP_20474852.1| peptide chain release factor 1 [Neisseria meningitidis 96023]
gi|433520399|ref|ZP_20477113.1| peptide chain release factor 1 [Neisseria meningitidis 65014]
gi|433524644|ref|ZP_20481301.1| peptide chain release factor 1 [Neisseria meningitidis 97020]
gi|433528987|ref|ZP_20485594.1| peptide chain release factor 1 [Neisseria meningitidis NM3652]
gi|433530993|ref|ZP_20487576.1| peptide chain release factor 1 [Neisseria meningitidis NM3642]
gi|433533260|ref|ZP_20489818.1| peptide chain release factor 1 [Neisseria meningitidis 2007056]
gi|433535111|ref|ZP_20491646.1| peptide chain release factor 1 [Neisseria meningitidis 2001212]
gi|433541572|ref|ZP_20498018.1| peptide chain release factor 1 [Neisseria meningitidis 63006]
gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
2594]
gi|432208650|gb|ELK64626.1| peptide chain release factor 1 [Neisseria meningitidis 88050]
gi|432214510|gb|ELK70410.1| peptide chain release factor 1 [Neisseria meningitidis 63041]
gi|432246197|gb|ELL01653.1| peptide chain release factor 1 [Neisseria meningitidis 63049]
gi|432251575|gb|ELL06939.1| peptide chain release factor 1 [Neisseria meningitidis 2004090]
gi|432252241|gb|ELL07598.1| peptide chain release factor 1 [Neisseria meningitidis 96023]
gi|432252696|gb|ELL08047.1| peptide chain release factor 1 [Neisseria meningitidis 65014]
gi|432258330|gb|ELL13616.1| peptide chain release factor 1 [Neisseria meningitidis 97020]
gi|432264091|gb|ELL19301.1| peptide chain release factor 1 [Neisseria meningitidis NM3652]
gi|432264804|gb|ELL20001.1| peptide chain release factor 1 [Neisseria meningitidis NM3642]
gi|432265388|gb|ELL20583.1| peptide chain release factor 1 [Neisseria meningitidis 2007056]
gi|432270305|gb|ELL25445.1| peptide chain release factor 1 [Neisseria meningitidis 2001212]
gi|432276404|gb|ELL31461.1| peptide chain release factor 1 [Neisseria meningitidis 63006]
Length = 358
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|339327370|ref|YP_004687063.1| peptide chain release factor 1 [Cupriavidus necator N-1]
gi|338167527|gb|AEI78582.1| peptide chain release factor 1 [Cupriavidus necator N-1]
Length = 360
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL E++ LL +++ I Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASMLAKLDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM++FA DEI A+ R+ +E +++L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKDFAADEIASARARLEALEASLQRLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ E++S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAGDLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ ++ INPADLRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD + R Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAKEASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
13091]
gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
13091]
Length = 358
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
Length = 358
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
F0314]
Length = 358
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|385323702|ref|YP_005878141.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
Length = 358
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQSEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
gi|166223537|sp|A4JB50.1|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
vietnamiensis G4]
Length = 360
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA + I A++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADASMRDFAEEAIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421566006|ref|ZP_16011768.1| peptide chain release factor 1 [Neisseria meningitidis NM3081]
gi|402341888|gb|EJU77060.1| peptide chain release factor 1 [Neisseria meningitidis NM3081]
Length = 358
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
Length = 358
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421538690|ref|ZP_15984865.1| peptide chain release factor 1 [Neisseria meningitidis 93003]
gi|402316360|gb|EJU51909.1| peptide chain release factor 1 [Neisseria meningitidis 93003]
Length = 358
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica 020-06]
gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
Length = 358
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++I +Y K REH+ L P+VE++ +Y++
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|389605213|emb|CCA44134.1| peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha522]
Length = 372
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 15 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 74
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 75 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 134
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 135 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 194
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 195 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 254
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 255 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 314
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 315 GDRSERIRTY 324
>gi|422110879|ref|ZP_16380738.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 358
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++I +Y K REH+ L P+VE++ +Y++
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ E Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKHEAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|340361634|ref|ZP_08684052.1| peptide chain release factor RF1 [Neisseria macacae ATCC 33926]
gi|419798872|ref|ZP_14324259.1| peptide chain release factor 1 [Neisseria sicca VK64]
gi|339888384|gb|EGQ77849.1| peptide chain release factor RF1 [Neisseria macacae ATCC 33926]
gi|385693459|gb|EIG24106.1| peptide chain release factor 1 [Neisseria sicca VK64]
Length = 358
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSIIEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421540940|ref|ZP_15987076.1| peptide chain release factor 1 [Neisseria meningitidis 93004]
gi|433469811|ref|ZP_20427221.1| peptide chain release factor 1 [Neisseria meningitidis 98080]
gi|402316805|gb|EJU52345.1| peptide chain release factor 1 [Neisseria meningitidis 93004]
gi|432201880|gb|ELK57953.1| peptide chain release factor 1 [Neisseria meningitidis 98080]
Length = 358
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
Length = 356
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 234/306 (76%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML+KL++ ++RL E++ LL +++ I Y K REH+ L P+ E Y Y++ +D+ T
Sbjct: 1 MLAKLDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQDDLAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+ +L+D EM++FA DEI A+ R+ +E +++L+LPKD ND RN+ +EIRAGTGG+ES
Sbjct: 61 AQALLDDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++ER W+ E++S S S++GGYKE+I RI G +S+LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEADE+ ++ INPADLRIDT+RASGAGGQH+NKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD + R Q+ A RR LIGS +
Sbjct: 241 RLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAKEASTRRNLIGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 DRIRTY 306
>gi|385328956|ref|YP_005883259.1| peptide chain release factor I [Neisseria meningitidis alpha710]
gi|385341451|ref|YP_005895322.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
gi|385857719|ref|YP_005904231.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
gi|416168783|ref|ZP_11608050.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
gi|416186839|ref|ZP_11613946.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710]
gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
Length = 358
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421747766|ref|ZP_16185443.1| peptide chain release factor 1 [Cupriavidus necator HPC(L)]
gi|409773584|gb|EKN55353.1| peptide chain release factor 1 [Cupriavidus necator HPC(L)]
Length = 360
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL++ ++RL E++ LL +++ N++ Y K REH+ L P+ E Y +Y++ +
Sbjct: 1 MKASMQAKLDQLAERLDEVNALLAREDATANMEQYRKLTREHAELSPVAEQYAHYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI+ A+ ++ ++E ++ L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKAFASDEIDAARAKLEELEASLQTLLLPKDPNDDRNLILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I RI G +SKLKFESG
Sbjct: 121 GEESALFAGDLLRMYTRYAERQRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ +I INP DLR+DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADELGEIEINPGDLRVDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L AR+KD +LR Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARLKDMQLRAAQAKEATTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Pseudogulbenkiania ferrooxidans
2002]
gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Pseudogulbenkiania ferrooxidans
2002]
Length = 358
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL + + RL+E+ LL + ++ + K REH+ L P+VE Y Y++
Sbjct: 1 MKPSIATKLSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EML D +M+ FA EI+ K+R+ +++E++KL+LPKD ND++NIF+EIRAGTG
Sbjct: 61 DLATATEMLADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ EI+S S S++GGYKE+I R++G +S+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEA+EI ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ+ RSQH NKA A+++L ARI D +LR QQ + A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQQQSVAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|416160021|ref|ZP_11606067.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
gi|433474031|ref|ZP_20431389.1| peptide chain release factor 1 [Neisseria meningitidis 97021]
gi|433482533|ref|ZP_20439790.1| peptide chain release factor 1 [Neisseria meningitidis 2006087]
gi|433484459|ref|ZP_20441681.1| peptide chain release factor 1 [Neisseria meningitidis 2002038]
gi|433486832|ref|ZP_20444022.1| peptide chain release factor 1 [Neisseria meningitidis 97014]
gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
gi|432208563|gb|ELK64540.1| peptide chain release factor 1 [Neisseria meningitidis 97021]
gi|432214958|gb|ELK70850.1| peptide chain release factor 1 [Neisseria meningitidis 2006087]
gi|432219951|gb|ELK75780.1| peptide chain release factor 1 [Neisseria meningitidis 2002038]
gi|432220645|gb|ELK76463.1| peptide chain release factor 1 [Neisseria meningitidis 97014]
Length = 358
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ +Y++
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELSPVVEVFQHYRRAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
gi|75432438|sp|Q5F750.1|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
1090]
gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
Length = 358
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLR DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|433537174|ref|ZP_20493674.1| peptide chain release factor 1 [Neisseria meningitidis 77221]
gi|432272370|gb|ELL27480.1| peptide chain release factor 1 [Neisseria meningitidis 77221]
Length = 358
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|333376032|ref|ZP_08467826.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
Length = 375
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/300 (61%), Positives = 232/300 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E N+ Y K +EH+ L PIVE Y Y++
Sbjct: 18 MKPSILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAES 77
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M+ FA +EI K +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 78 DLTDAQEMLSDPDMKEFAAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTG 137
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ EI+S S S++GGYKE+I R+IGL YSKLKFESG
Sbjct: 138 GDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESG 197
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NP DLRIDT+RASGAGGQHINKT
Sbjct: 198 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKT 257
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 258 DSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGS 317
>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
Length = 358
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ + P+VE ++ Y +
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DMAEAQEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
Length = 358
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L A + D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421563860|ref|ZP_16009674.1| peptide chain release factor 1 [Neisseria meningitidis NM2795]
gi|402339873|gb|EJU75081.1| peptide chain release factor 1 [Neisseria meningitidis NM2795]
Length = 358
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L PIVE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPIVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|358635920|dbj|BAL23217.1| peptide chain release factor 1 [Azoarcus sp. KH32C]
Length = 359
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ + RL ELD L+ EV ++ + RE + + P+V LY Y++ E
Sbjct: 1 MKQSIRDKLDFLTSRLTELDRELSSPEVAADMDSFRALGRERAEIEPVVSLYGAYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D +A+ ML+D E+R A E+ RI +E E+++ +LP+D ND RN+F+E+RAGTG
Sbjct: 61 DCESARGMLSDPELRELAESELEEGAARIASLEGELQRALLPRDPNDDRNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ER WK E++S S S++GGYKE+I R++G YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRYAERQRWKVEVVSASESDLGGYKEVIVRVLGAGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEIE +NINPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPTTETQGRIHTSACTVAVMPEADEIEAVNINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQH+N+A A+ +L ARI D +LREQQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIHDMQLREQQAKEAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|335055656|ref|YP_585342.3| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
Length = 371
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL++ ++RL E++ LL +++ N+ Y K REH+ L P+ E Y Y++ +
Sbjct: 12 MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 71
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI+ A++R+ +E ++ L+LPKD ND RN+ +EIRAGTG
Sbjct: 72 DLATAQALLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTG 131
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 132 GEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESG 191
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ ++ INP+DLR+DT+RASGAGGQH+NKT
Sbjct: 192 GHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKT 251
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD +LR Q+ A RR LIGS
Sbjct: 252 DSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRNLIGS 311
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 312 GDRSDRIRTY 321
>gi|430809726|ref|ZP_19436841.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
gi|429497839|gb|EKZ96360.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
Length = 360
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL++ ++RL E++ LL +++ N+ Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI+ A++R+ +E ++ L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ ++ INP+DLR+DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD +LR Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|421551349|ref|ZP_15997343.1| peptide chain release factor 1 [Neisseria meningitidis 69166]
gi|421561718|ref|ZP_16007556.1| peptide chain release factor 1 [Neisseria meningitidis NM2657]
gi|433471985|ref|ZP_20429364.1| peptide chain release factor 1 [Neisseria meningitidis 68094]
gi|433478196|ref|ZP_20435510.1| peptide chain release factor 1 [Neisseria meningitidis 70012]
gi|433526720|ref|ZP_20483344.1| peptide chain release factor 1 [Neisseria meningitidis 69096]
gi|433539490|ref|ZP_20495959.1| peptide chain release factor 1 [Neisseria meningitidis 70030]
gi|402327938|gb|EJU63321.1| peptide chain release factor 1 [Neisseria meningitidis 69166]
gi|402336745|gb|EJU72003.1| peptide chain release factor 1 [Neisseria meningitidis NM2657]
gi|432206910|gb|ELK62908.1| peptide chain release factor 1 [Neisseria meningitidis 68094]
gi|432213969|gb|ELK69878.1| peptide chain release factor 1 [Neisseria meningitidis 70012]
gi|432259238|gb|ELL14511.1| peptide chain release factor 1 [Neisseria meningitidis 69096]
gi|432271877|gb|ELL26995.1| peptide chain release factor 1 [Neisseria meningitidis 70030]
Length = 358
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|418288849|ref|ZP_12901275.1| peptide chain release factor 1 [Neisseria meningitidis NM233]
gi|418291111|ref|ZP_12903169.1| peptide chain release factor 1 [Neisseria meningitidis NM220]
gi|433522461|ref|ZP_20479145.1| peptide chain release factor 1 [Neisseria meningitidis 61103]
gi|372200450|gb|EHP14522.1| peptide chain release factor 1 [Neisseria meningitidis NM220]
gi|372200902|gb|EHP14896.1| peptide chain release factor 1 [Neisseria meningitidis NM233]
gi|432258070|gb|ELL13361.1| peptide chain release factor 1 [Neisseria meningitidis 61103]
Length = 358
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
Length = 358
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|347537871|ref|YP_004845295.1| peptide chain release factor 1 [Pseudogulbenkiania sp. NH8B]
gi|345641048|dbj|BAK74881.1| peptide chain release factor 1 [Pseudogulbenkiania sp. NH8B]
Length = 358
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/300 (59%), Positives = 232/300 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL + + RL+E+ LL + ++ + K REH+ L P+VE Y Y+
Sbjct: 1 MKPSIATKLSQLADRLEEVTHLLASEAATRDMDSFRKLTREHAELTPVVETYQAYRLCES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EML D +M+ FA EI+ K+R+ +++E++KL+LPKD ND++NIF+EIRAGTG
Sbjct: 61 DLATATEMLADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ EI+S S S++GGYKE+I R++G +S+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEA+EI ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ+ RSQH NKA A+++L ARI D +LR QQ + A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQQQSVAAERKSLIGS 300
>gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153]
Length = 372
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 15 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 74
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 75 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTG 134
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 135 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 194
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 195 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 254
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 255 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 314
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 315 GDRSERIRTY 324
>gi|429743185|ref|ZP_19276768.1| peptide chain release factor 1 [Neisseria sp. oral taxon 020 str.
F0370]
gi|429166397|gb|EKY08384.1| peptide chain release factor 1 [Neisseria sp. oral taxon 020 str.
F0370]
Length = 358
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E ++ +Y K REH+ L P+VE + Y +
Sbjct: 1 MKPSILDKLQALADRLEEVTALLGSPEATADMDNYRKLTREHAELTPVVETFQRYTQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D EM++FA +EI AK R+ ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DIADAQEMLSDPEMKDFAAEEIEAAKARMEALDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL VYS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+P+G+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPSGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421542965|ref|ZP_15989066.1| peptide chain release factor 1 [Neisseria meningitidis NM255]
gi|421555376|ref|ZP_16001309.1| peptide chain release factor 1 [Neisseria meningitidis 98008]
gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275]
gi|402316044|gb|EJU51597.1| peptide chain release factor 1 [Neisseria meningitidis NM255]
gi|402330236|gb|EJU65584.1| peptide chain release factor 1 [Neisseria meningitidis 98008]
Length = 358
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDTDDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442]
gi|189039981|sp|A9M1Q8.1|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442]
Length = 358
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|119361586|sp|Q1LIF3.2|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL++ ++RL E++ LL +++ N+ Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI+ A++R+ +E ++ L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ ++ INP+DLR+DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD +LR Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|385855707|ref|YP_005902220.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
gi|421568170|ref|ZP_16013897.1| peptide chain release factor 1 [Neisseria meningitidis NM3001]
gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
gi|402342289|gb|EJU77457.1| peptide chain release factor 1 [Neisseria meningitidis NM3001]
Length = 358
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
Length = 358
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718]
gi|46576779|sp|Q82TH4.1|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC
19718]
Length = 359
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ +L + S RL ELD LL+ +++ ++ +Y K RE + + P+ ELY Y+++ +
Sbjct: 1 MNKGIIDQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EM +D + R+FA EI ++++ +IE EI + +LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DLATAREMSSDPQFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ E++S++ SE+GGYKEII RIIG YS+LKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTS CTVAV+PEADEI DI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ RSQHKNKA A+ +L+ARI D ++R QQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARILDKQVRAQQAEQAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSERIRTY 310
>gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 360
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE + RL ELD +L + ++ +Y + REH+ + P+V LY + +
Sbjct: 1 MNQSICDKLEHLTGRLDELDRMLASGDATRDMDEYRRLSREHAEIAPVVALYQIWSRTRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A +M+ D EMR A E+ +K+R+ IE +++KL+LP+D D+RN+F+EIRAGTG
Sbjct: 61 DLAAALDMVGDPEMRELAEAEVAASKERLPQIEKDLQKLLLPRDAKDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +L RMY R++ER W+ E+IS S S++GGY+EIIARIIG +VY++LKFESG
Sbjct: 121 GDESALFAGNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARIIGSDVYARLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD +E++ +NPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPDTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQHKNKA A+ +L+ARI+D + REQ ++ A RR L+GS
Sbjct: 241 DSAVRITHLPTGVVVECQDDRSQHKNKAQAMSVLVARIRDMQEREQDASIASERRSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|410471166|ref|YP_006894447.1| peptide chain release factor 1 [Bordetella parapertussis Bpp5]
gi|408441276|emb|CCJ47712.1| peptide chain release factor 1 [Bordetella parapertussis Bpp5]
Length = 360
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ +CK RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFCKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|350544349|ref|ZP_08913972.1| Peptide chain release factor 1 [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527872|emb|CCD37141.1| Peptide chain release factor 1 [Candidatus Burkholderia kirkii
UZHbot1]
Length = 360
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ +KR +L+ LL++++V +++ Y K REH+ + PIV+ Y +++
Sbjct: 1 MKTSMQSKLDQLAKRQVDLNELLSREDVTSDMDQYRKITREHAEISPIVDQYALWRQGLT 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A++R+ IE E++ ++LPKD ND RNIFIEIRAGTG
Sbjct: 61 DEATAQELLADPSMRDFAEEEIGEARERMEKIEGELQMMLLPKDPNDDRNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W E +S S+S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWSVETMSESVSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQ RIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQSRIHTSACTVAVMPEADEISEVVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK LK+L ARIKD + EQ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRTLKMLAARIKDKQYHEQHEKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18]
gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1]
gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
gi|385336113|ref|YP_005890060.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
gi|238690206|sp|B4RN52.1|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 358
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLR DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|349573887|ref|ZP_08885854.1| peptide chain release factor RF1 [Neisseria shayeganii 871]
gi|348014557|gb|EGY53434.1| peptide chain release factor RF1 [Neisseria shayeganii 871]
Length = 369
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL S+RL+E+ LL E +I Y + +EH+ L P+V+ Y Y++
Sbjct: 12 MKPSLLDKLHALSERLEEVTALLGSPEATADIDHYRRLNQEHAELTPVVDTYRQYRQAQS 71
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+E+L D EM++FA +EI+ AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 72 DLAAAEELLADPEMKDFAAEEIDDAKAKIDTLDTELQKLLLPKDADDDKNIFIEIRAGTG 131
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ER W+ EI+S + S++GGYKE+IARI+G YS+LKFESG
Sbjct: 132 GDEAALFAGDLLRMYTRFAERQRWQVEIVSANESDLGGYKEVIARIVGHGAYSQLKFESG 191
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 192 GHRVQRVPATESQGRIHTSACTVAVMPEADELETIELNPADLRIDTFRASGAGGQHINKT 251
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+P+G+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 252 DSAVRITHLPSGLVVECQDGRSQHANKAQAMKVLAARLNDIQKREAQAKEAAERKSLIGS 311
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 312 GDRSERIRTY 321
>gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
Length = 360
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ S RL EL+ LL+++ V ++ Y K REH+ + P+VE Y ++
Sbjct: 1 MKTSMQSKLDQLSNRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRLARG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D MR FA +EI A++R+ +E E++K++LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DEATAQELLSDAAMREFAEEEIREARERMARLEAELQKMLLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKERALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|374370522|ref|ZP_09628524.1| peptide chain release factor 1 [Cupriavidus basilensis OR16]
gi|373097942|gb|EHP39061.1| peptide chain release factor 1 [Cupriavidus basilensis OR16]
Length = 360
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ S+RL E++ LL +++ I Y K REH+ L P+ E Y Y + E
Sbjct: 1 MKASMLAKLDQLSERLDEVNALLAREDATAKIDQYRKLTREHAELTPVAEQYAQYCQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI A++R+ +E ++KL+LPKD ND RN+ +EIRAG G
Sbjct: 61 DLATAQALLDDPEMKEFAADEITTARERLEMLEGSLQKLLLPKDPNDDRNLLLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF +LLRMY R++ER W+ E++S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAANLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIIRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ ++ INP+DLR+DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVTEVEINPSDLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L AR+ D+KLR Q+ A RR LIG+
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARLMDAKLRAAQAKEASTRRNLIGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|345875611|ref|ZP_08827403.1| peptide chain release factor 1 [Neisseria weaveri LMG 5135]
gi|343968904|gb|EGV37126.1| peptide chain release factor 1 [Neisseria weaveri LMG 5135]
Length = 358
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ + RL+E+ LL E +++ +Y K REHS + P+VE + Y++
Sbjct: 1 MKPSILEKLQQLADRLEEVTHLLGSPEATDDMDNYRKLTREHSEITPVVETFQKYRQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D EM++FA +EI A ++I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLAEAQEMLADPEMKDFAAEEIEAANEKIEMLDGELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ EI+S + S++GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWQVEIVSANESDLGGYKEVIARIVGLGAYSQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHSNKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|417958326|ref|ZP_12601241.1| peptide chain release factor 1 [Neisseria weaveri ATCC 51223]
gi|343966984|gb|EGV35235.1| peptide chain release factor 1 [Neisseria weaveri ATCC 51223]
Length = 358
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ + RL+E+ LL E +++ +Y K REHS + P+VE + Y++
Sbjct: 1 MKPSILEKLQQLADRLEEVTHLLGSPEATDDMDNYRKLTREHSEITPVVETFQKYRQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D EM++FA +EI A ++I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLAEAQEMLADPEMKDFAAEEIEAANEKIEMLDGELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W EI+S + S++GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWHVEIVSANESDLGGYKEVIARIVGLGAYSQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHSNKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
Length = 360
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + RL+ELD L +E ++ + + RE + + P+V LY ++
Sbjct: 1 MKQSIRDKLEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D EMR E+ + RI +E E+++ +LP+D ND RN+F+EIRAGTG
Sbjct: 61 DCATARELLADPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ER WK EI+S S S++GGYKE+IAR++G YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+E ++INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPVTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ+DRSQH+NKA A+ +L AR+ D+++R QQS A R+ L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARVRAQQSAEAAQRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1]
gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1]
Length = 360
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ S RL EL+ LL+++ V ++ Y K REH+ + P+VE Y ++
Sbjct: 1 MKTSMQSKLDQLSSRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEQYAQWRLARG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR FA +EI A++R+ +E E++ ++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADASMREFAEEEIREARERMARLEAELQTMLLPKDPNDDRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRIAGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAREAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
gi|229470349|sp|A9IER8.1|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
Length = 360
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ S RL E+D LL + + +++ + K RE + L P+V+ + + + +
Sbjct: 1 MKSSMRSRLEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D +M+ A DEI ++R+ +E E++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
Length = 360
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 229/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M++KL S+RL E+D L++ + + +N+ +Y K REH+ + PIVE Y +++
Sbjct: 1 MKPSMITKLANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ MLND EM+ FA +EI K ++ IE ++ L+LPKD ND +NIF+EIRAGTG
Sbjct: 61 DINEAQTMLNDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDES LF DL RMY R++ER WK E++S + E+GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESGLFAGDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ D+ INPAD+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH PTGIVV+CQ RSQH NKA A +L ARIK ++ EQQS A R+ LIGS
Sbjct: 241 DSAVRLTHAPTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVDEQQSKIASERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72]
gi|166223529|sp|A1K443.1|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72]
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + RL ELD L+ ++ ++ + RE + L P+V LY Y++ +
Sbjct: 1 MKQSIRDKLEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D EM+ E+ + RI ++ ++++ +LP+D ND+RN+F+EIRAGTG
Sbjct: 61 DCATARELLDDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ER W+ EI+S + S++GGYKE+IARI+G YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TETQGRIHTSACTVAV+PEADE+ + INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRIPVTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NKA A+ +L AR+ D++LR +QS A RR LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQSAEAATRRSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
gi|384203174|ref|YP_005588913.1| peptide chain release factor 1 [Bordetella pertussis CS]
gi|408416813|ref|YP_006627520.1| peptide chain release factor 1 [Bordetella pertussis 18323]
gi|410418180|ref|YP_006898629.1| peptide chain release factor 1 [Bordetella bronchiseptica MO149]
gi|412340322|ref|YP_006969077.1| peptide chain release factor 1 [Bordetella bronchiseptica 253]
gi|427812637|ref|ZP_18979701.1| peptide chain release factor 1 [Bordetella bronchiseptica 1289]
gi|427817662|ref|ZP_18984725.1| peptide chain release factor 1 [Bordetella bronchiseptica D445]
gi|427823817|ref|ZP_18990879.1| peptide chain release factor 1 [Bordetella bronchiseptica Bbr77]
gi|46576754|sp|Q7W023.1|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46576762|sp|Q7WQE9.1|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
gi|401778983|emb|CCJ64453.1| peptide chain release factor 1 [Bordetella pertussis 18323]
gi|408445475|emb|CCJ57125.1| peptide chain release factor 1 [Bordetella bronchiseptica MO149]
gi|408770156|emb|CCJ54946.1| peptide chain release factor 1 [Bordetella bronchiseptica 253]
gi|410563637|emb|CCN21172.1| peptide chain release factor 1 [Bordetella bronchiseptica 1289]
gi|410568662|emb|CCN16714.1| peptide chain release factor 1 [Bordetella bronchiseptica D445]
gi|410589082|emb|CCN04147.1| peptide chain release factor 1 [Bordetella bronchiseptica Bbr77]
Length = 360
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ + K RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|119361511|sp|Q2KZZ3.2|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML +LE+ + RL E+D LL + ++ + + RE + L P+V +N ++
Sbjct: 1 MKSSMLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D EM+ A +EI A++RI +E E++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|350571878|ref|ZP_08940194.1| peptide chain release factor RF1 [Neisseria wadsworthii 9715]
gi|349791063|gb|EGZ44956.1| peptide chain release factor RF1 [Neisseria wadsworthii 9715]
Length = 358
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ + RL+E+ LL E ++ +Y K +EH+ L PIVE++ Y++
Sbjct: 1 MKPSILEKLQQLADRLEEVTQLLGAPESTADMDNYRKLNKEHAELTPIVEVFRQYRQAQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M++FA +EI AK +I ++L ++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPDMKDFAAEEIEAAKTKIETLDLALQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + S++GGYKE+IARIIGL YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRYAERNNWQVEIVSANESDLGGYKEVIARIIGLGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDMQKREAQAKEAAERKTLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
Length = 358
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KLE + +EL+ L+ + + +++ + K +EH+ L PI+E Y+ YKK+ +
Sbjct: 1 MKDSMKNKLENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVK 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I AKEML+D EM+ FA +EI+ +K I + E +++ L++PKD ND +NIF+EIRAGTG
Sbjct: 61 NIEEAKEMLSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ERN W E+IS + S +GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEIED++INPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ+DRSQH+NKA A+ IL A+IKD++++ QQS A R+ LIGS
Sbjct: 241 DSAVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQQSQRASERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|348617957|ref|ZP_08884490.1| Peptide chain release factor 1 (RF-1) [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816662|emb|CCD29146.1| Peptide chain release factor 1 (RF-1) [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 359
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KLE+ ++RL EL+ L+Q+++ + + Y +REH+ L P+VE Y +++ +
Sbjct: 1 MKQNMQRKLEQLAQRLDELNQTLSQEDITSKLDLYRALMREHAELAPLVEHYAQWQQAHA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D +R+FA DE A+ R+ +E +++ L+LPKD +D RNIF+EIRAGTG
Sbjct: 61 DEQTARGMLDDPALRDFAADEARKARDRMAQLEAQLQTLLLPKDPDDARNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF LLRMY+R++ER W+ EI+S SLSE GGYKE+IARI G YS+LKFESG
Sbjct: 121 GEESALFAGVLLRMYLRYAERQRWQVEILSESLSETGGYKEVIARIAGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE QGRIHTSACTVAV+ EAD+I ++++NPADLR+DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPETEAQGRIHTSACTVAVLSEADQIGEVDMNPADLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+N+ AL++L AR+KD +++EQ + + R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNRERALQVLAARLKDRRIQEQNAEISATRKRLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
gi|46576758|sp|Q7WCE3.1|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
Length = 360
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ + K RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+I RI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
Length = 360
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKL + S+RL E+ LL+ +E ++ + + RE + + P+V+LY+ ++
Sbjct: 1 MKSNISSKLAQLSERLDEVTRLLSSEEATRDMDAFRRLNRERAEIEPVVDLYHAWQACEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EM D +MR FA EI ++R+ +E++++K +LPKD ND+RN+F+E+RAGTG
Sbjct: 61 DIATAQEMAGDPDMREFAEAEIKAGRERLEQLEVDLQKQLLPKDPNDERNVFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY+RF+ER W+ EIIS S E+GGYKE+IARIIG YS LKFESG
Sbjct: 121 GDEAAIFAGDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARIIGQGAYSVLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ ++ +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG VV+CQ+ RSQH+NKA A+++L ARIKD + +E S A R+ L+GS
Sbjct: 241 DSAVRITHLPTGTVVECQDGRSQHQNKAQAMRVLAARIKDKQEQEAHSKIAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
Length = 356
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 231/306 (75%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML +LE+ + RL E+D LL + ++ + + RE + L P+V +N ++ D+ T
Sbjct: 1 MLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+EML D EM+ A +EI A++RI +E E++ L+LP+D ND R++F+EIRAGTGGDES
Sbjct: 61 AQEMLADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG HRV
Sbjct: 121 ALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+PEADE+ DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
gi|81598974|sp|Q5P7G7.1|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
Length = 359
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 227/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + RL ELD L+ + ++ + RE + + P+V LY Y++
Sbjct: 1 MKQSIRDKLELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D +A+ ML D EMR A E+ R+ +E E++ +LP D +D+RN+F+E+RAGTG
Sbjct: 61 DCESARAMLADAEMRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE++LF DLLRMY R++ER WK EI+S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDEASLFAGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TETQGRIHTSACTVAV+PEADE+E +NINPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRIPVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQH+N+A A+ +L ARI+D +LREQQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQLREQQAREAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera versatilis 301]
gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera versatilis 301]
Length = 360
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M+ KL S+RL+E++ L++ + V NN+ +Y K +EH+ + PIVE Y+ +++
Sbjct: 1 MKPSMIRKLATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D +M+ FA +EI K+++ +E ++ L+LPKD ND +N+F+EIRAGTG
Sbjct: 61 DIKEAQSMLSDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDES LF DL RMY R++E+ WK EI+S + SE+GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESGLFCGDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ D+ INPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ RSQH NKA A+ +L ARIK ++ EQ S A R+ LIGS
Sbjct: 241 DSAVRITHAPTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVDEQNSKIASERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
Length = 359
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL RL+EL+ L+ +E ++ Y K +EHS + P+V++Y + + +
Sbjct: 1 MKSSMQNKLNALQNRLEELNDELSSEEATKDMDRYKKISKEHSDILPVVDIYQEFTRHTK 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ AKEML+D EM++FA DEI+ K +I +E +++ L+LPKD ND++NIF+EIRAG G
Sbjct: 61 DMNDAKEMLSDPEMKSFAQDEIDANKAKIIMLEEQLQTLLLPKDPNDEKNIFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF D+ RMY R++ER W+ E+IS + SE+GG+KEIIA++IG YSKLKFESG
Sbjct: 121 GDESALFAGDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKVIGQGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ EADEI D++INPAD+RIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ+DRSQH+NKA A+ IL ARIKD+++ +QQS A R+ LIGS
Sbjct: 241 DSAVRITHAPTGIVVECQDDRSQHRNKAQAMSILAARIKDAQINDQQSKIATERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91]
gi|122314234|sp|Q0AHU1.1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas
eutropha C91]
Length = 359
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ +L + S RL+ELD LL+ +++ ++ +Y K RE S + P+ Y+ Y+++ +
Sbjct: 1 MNKGIVDQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EM D + R+FA EI+ K+++ DIE EI K +LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DLATAMEMSVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ EI+S++ SE+GGYKEIIARIIG YS+LKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTS CTVAV+PEADEI + +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ RSQHKNKA A+ +L++RI D ++R QQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRILDKQVRAQQAEQAAARKSLVGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSERIRTY 310
>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
Length = 355
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 232/306 (75%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +LE+ + RL E+D LL + E+ ++ Y K RE + L P+V ++N++ DI T
Sbjct: 1 MRDRLEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+EM+ D +MR A +E+ L K+++ +E +++ L+LP+D +D R++++EIRAGTGGDES
Sbjct: 61 AQEMMADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++E N W+ E++S S SEIGGYKE+IAR+ G VY +LKFESG HRV
Sbjct: 121 ALFAGDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TETQGRIHTSACTVAV+PEADE DI INPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
R+TH+PTG+VV+CQ+DRSQH+NK AL++L AR+KD + +EQ A R+ L+G+ +
Sbjct: 241 RVTHLPTGLVVECQDDRSQHRNKDKALQVLAARLKDKQQQEQHDKEAAQRKSLVGTGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|393777987|ref|ZP_10366275.1| peptide chain release factor 1 [Ralstonia sp. PBA]
gi|392715038|gb|EIZ02624.1| peptide chain release factor 1 [Ralstonia sp. PBA]
Length = 362
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL ELD LL ++ ++ Y K +E + L P+V+ Y Y++
Sbjct: 1 MKPSMLAKLDQLAERLTELDALLASEQSTTDMNQYRKLTQERAELEPVVDQYRLYQQTQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L D +M+ FA +EI+ A+ R +E E+++L+LP+D ND+RN+++EIRAGTG
Sbjct: 61 DIETAQGLLADPDMKAFAEEEIDAAENRQAALEQELQRLLLPRDPNDERNLYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ E++S S SE+GGY+EII RI G +S+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEVMSESPSELGGYREIIVRIAGQGAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ D+ I ADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPVTETQGRIHTSACTVAVLPEADELADVEIKAADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD + RE QS A RR LIGS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDRQTREAQSKEADARRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|381401441|ref|ZP_09926344.1| peptide chain release factor 1 [Kingella kingae PYKK081]
gi|380833591|gb|EIC13456.1| peptide chain release factor 1 [Kingella kingae PYKK081]
Length = 358
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E N+ Y K +EH+ L PIVE Y Y++
Sbjct: 1 MKPSILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EM +D +M+ FA +EI AK +I ++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLTDAQEMSSDPDMKEFAAEEIEAAKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN WK EI+S S S++GGYKE+I R+IGL YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWKTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 241 DSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
Length = 362
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL + S+RL E++ LL+ +E ++ Y K RE + L P+V+L++ Y+
Sbjct: 1 MKPNIATKLGQLSERLLEVNQLLSTEEATRDMDTYRKLNRERAELEPVVDLFHAYQACEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EM D EMR FA EI + ++ ++ E++ +LPKD ND+R++F+E+RAGTG
Sbjct: 61 DIAAAREMAEDPEMREFADTEIKEGEAKLALLDKELQTQLLPKDPNDERSVFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY RF+ER W+ E++S S E+GGYKEIIARI G YS LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRFAERRRWQVEVVSESPGEMGGYKEIIARIAGQGAYSVLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTSACTVA++PE DE+ D+ +N ADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATETQGRVHTSACTVAIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+VV+CQ+ RSQH+NKA A+++L ARIKD+++R Q + TA R+ L+GS
Sbjct: 241 DSAVRITHIPTGVVVECQDGRSQHQNKAQAMRVLCARIKDAQVRAQNAETAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189039983|sp|A4SV43.1|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 359
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL+ RL EL+ LLT +E ++ Y K REHS + +VE + YKK
Sbjct: 1 MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EM D EM++FA +E A+ + ++E ++KL+LPKD ND+RN+F+EIRAGTG
Sbjct: 61 DAQAAEEMRKDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ER WK E+++ + S++GGYKE++ R++G +VYS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PEADE+E + INPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ+DRSQH+N+ A+K+L++RI D++ RE+ A+ R+ LIGS
Sbjct: 241 DSAVRITHIPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|424779611|ref|ZP_18206528.1| peptide chain release factor 1 [Alcaligenes sp. HPC1271]
gi|422885619|gb|EKU28063.1| peptide chain release factor 1 [Alcaligenes sp. HPC1271]
Length = 359
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ ++RL E+D +L + E+ +N+ ++ K RE S L P+V + +Y+
Sbjct: 1 MKDSMRSRLEQLARRLHEVDAMLAEPEIASNMDEFRKLSRERSELDPVVAAFKSYEAAEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++M++D E++ +E L K+RI +E E++ L+LP+D +D RN+FIEIRAG G
Sbjct: 61 DLQAAQDMMSDPELKEMGEEEYKLGKERIAQLEDELQILLLPRDPDDTRNVFIEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++E W+ EI+S S SE+GGYKE+I RI G +VY +LKFESG
Sbjct: 121 GDESALFAGDLLRMYMRYAENCGWRTEIMSASDSEVGGYKEVIVRIEGQDVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE QGRIHTS CTVAV+PEA+ + +I INPADLR+DT+RASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETEAQGRIHTSTCTVAVLPEAEGLAEITINPADLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+VV+CQ+DRSQH+N+ AL++L AR+KD + REQ A R+ L+G+
Sbjct: 241 DSAVRLTHLPTGLVVECQDDRSQHRNREKALQVLAARLKDKQQREQSDKEAAERKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
23834]
gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
23834]
Length = 358
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S+RL+E+ LL+ E +I + + +EH+ L P+VE Y Y++
Sbjct: 1 MKPSVLDKLQSLSERLEEVTALLSTPEATVDINRFRQLNQEHAELTPVVEAYRQYRQAES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++ML D EM++FA +EI AK +I ++ E++KL+LPKD++D +NIF+E+RAGTG
Sbjct: 61 DLADAEDMLADPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + S++GGYKE+IARI G+ Y +LKFESG
Sbjct: 121 GDEAALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+E+I +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 241 DSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|421486210|ref|ZP_15933758.1| peptide chain release factor 1 [Achromobacter piechaudii HLE]
gi|400195555|gb|EJO28543.1| peptide chain release factor 1 [Achromobacter piechaudii HLE]
Length = 360
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 230/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE RL E+D LL Q E +++ + K RE + L P+VE + + + E
Sbjct: 1 MKSSMRSRLEHLCHRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + ++ +E ++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLSDPDMKAMAEDEIKSGRGKLEGLESALQLLLLPRDPNDGRSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++ EADE+ +I INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE+QS A R+ LIG+
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|393760528|ref|ZP_10349337.1| peptide chain release factor 1 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161263|gb|EJC61328.1| peptide chain release factor 1 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 359
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ ++RL E+D +L + E+ N+ ++ K RE + L P+V + +Y+
Sbjct: 1 MKDSMRSRLEQLARRLHEVDAMLAEPEIAGNMDEFRKLSRERAELDPVVTAFKSYEAAEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++M+ D E++ +E L K+RI +E E++ L+LP+D +D RN+FIEIRAG G
Sbjct: 61 DLQAAQDMMTDPELKEMGEEEYKLGKERIAQLEDELQILLLPRDPDDTRNVFIEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++E W+ EI+S S SE+GGYKE+I RI G +VY +LKFESG
Sbjct: 121 GDESALFAGDLLRMYMRYAENCGWRTEIMSASDSEVGGYKEVIVRIEGQDVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE QGRIHTS CTVAV+PEA+ + +I INPADLR+DT+RASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETEAQGRIHTSTCTVAVLPEAEGLAEITINPADLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+VV+CQ+DRSQH+N+ AL++L AR+KD + REQ A R+ L+G+
Sbjct: 241 DSAVRLTHLPTGLVVECQDDRSQHRNREKALQVLAARLKDKQQREQSDKEAAERKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|452126505|ref|ZP_21939088.1| peptide chain release factor 1 [Bordetella holmesii F627]
gi|452129881|ref|ZP_21942454.1| peptide chain release factor 1 [Bordetella holmesii H558]
gi|451921600|gb|EMD71745.1| peptide chain release factor 1 [Bordetella holmesii F627]
gi|451922741|gb|EMD72885.1| peptide chain release factor 1 [Bordetella holmesii H558]
Length = 360
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +LE+ + RL E+D LL E N+ + K RE + L P+V + ++
Sbjct: 1 MKSSMRGRLEQLAHRLIEVDALLADPETAGNMDRFRKLSRERAELEPVVVAFTAFEGTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D EM+ A DEI A++R+ +E E++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLSDPEMKAMAEDEIKAARERLEVLEGELQLLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYSRYAENRGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP TE Q RIHTSACTVAV+PEADE+ +I INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 VHRVQRVPATEAQDRIHTSACTVAVMPEADEMNEIVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|456062469|ref|YP_007501439.1| Peptide chain release factor 1 [beta proteobacterium CB]
gi|455439766|gb|AGG32704.1| Peptide chain release factor 1 [beta proteobacterium CB]
Length = 359
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL+ RL EL+ LLT +E ++ +Y K REHS + +VE + YK+
Sbjct: 1 MKPSMRAKLDHLDTRLAELNSLLTTEESTKDMDNYRKLTREHSDIAMVVEQFGLYKQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EM D EM++FA +E A+ + ++E ++KL+LPKD ND+RN+F+EIRAGTG
Sbjct: 61 DAQAAEEMRKDPEMKDFADEEQKQAQATMEELEGVLQKLLLPKDVNDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ER W+ E+++ + S++GGYKE++ R++G +VYS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAERQGWRVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PEADE+E + INPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG VV+CQ+DRSQH+N+ A+K+L++RI D++ RE+ A+ R+ LIGS
Sbjct: 241 DSAVRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
Length = 358
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKL+ S RL+E+ LL E N+ Y + +EH+ L PIV+ Y+ Y +
Sbjct: 1 MKPSIQSKLQNLSHRLEEVTALLGSPEATANMDSYRRLNQEHAELTPIVDTYHAYTQAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK I ++LE++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAQEMLSDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S S S++GGYKE+I R++GL YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ I +N DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NK ALK+L AR+ D + RE + A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLNDIQKREAHAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 362
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E ++ +Y + +EH+ L P+VE Y Y +
Sbjct: 5 MKPSILDKLQNLAHRLEEVTALLGSPEAVADMDNYRRLNQEHAELTPVVETYRAYTRAQS 64
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M++FA +E AK +I ++LE++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 65 DLADAQEMLSDPDMKDFAAEETEAAKAKIDALDLELQKLLLPKDADDDKNIFIEIRAGTG 124
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + S++GGYKE+I R+IGL YSKLKFESG
Sbjct: 125 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRLIGLGAYSKLKFESG 184
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 185 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 244
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 245 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 304
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 305 GDRSERIRTY 314
>gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC
12472]
gi|46576724|sp|Q7P1Y2.1|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC
12472]
Length = 358
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++L + + RL+E+ LL + +++ + K REH+ L P+VE ++ Y++
Sbjct: 1 MKASIAARLAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A++ML D EM+ FA EI K ++ ++LE++KL+LPKD ND +NIF+EIRAGTG
Sbjct: 61 DIAAAEDMLADPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S S S++GGYKE+I R++G YS+LKFESG
Sbjct: 121 GDEAALFAADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ EADEI ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+ RSQH NKA A+++L ARI D +LRE+ A R+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLREKNQKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
Length = 362
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 229/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ ++ Y REH+ + I Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLAGAREMLADPDMAEMAQEEITSAEAELLQLEDELQRLLLPKDPDDARNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY+R+++R WK E++S + +E+GGYKEI+ RI G +VY LKFESG
Sbjct: 121 GDESALFAGDLTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|334132944|ref|ZP_08506699.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
gi|333441854|gb|EGK69826.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
Length = 361
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE+ S RL +LD L V +I Y K REH+ L P++ LY + + +
Sbjct: 1 MKPRIAEKLEQLSTRLADLDAALADPGVTADIDHYRKLTREHAELTPVIALYQAWCRARD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D +M+ A EI + + +E E+++ +LPKD +D RN+F+EIRAGTG
Sbjct: 61 DGEAARELLADPDMKELAQGEIEQSAADMERLEGELQRALLPKDPDDGRNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ERN WK E++S S S++GGY+EIIAR+ G VY +LKFESG
Sbjct: 121 GDESALFAADLFRMYSRYAERNRWKVEVVSASESDLGGYREIIARVSGDGVYQRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE+ +I+INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPVTETQGRIHTSACTVAVMAEVDEVGEIDINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ+DRSQH+NKA A+ +L ARI+D+++R + S A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDDRSQHRNKAQAMSVLAARIRDAQVRARDSQIASTRRSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|418529161|ref|ZP_13095101.1| peptide chain release factor 1 [Comamonas testosteroni ATCC 11996]
gi|371453587|gb|EHN66599.1| peptide chain release factor 1 [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 227/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ + ++LE++++RL+ELDFLL+++++ ++K Y REH+ + I Y Y +
Sbjct: 1 MQDFLRNQLERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D +M A +EI + + +E E+++L+LPKD +D R F+EIRAGTG
Sbjct: 61 DIAAAREMLDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL+RMY R++ WK E++S S +EIGGYKE++ RI G NVY L+FESG
Sbjct: 121 GDESALFAGDLIRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A MR+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
Length = 369
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 233/318 (73%), Gaps = 8/318 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +LE++++RL EL+FLL+++++ ++K + REH+ + I Y Y++
Sbjct: 1 MKDFLRQQLERYAQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRET 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ +A+EML + +M + A +EI A + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLSSAREMLAEPDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI--------IGLNVY 172
GDESALF DLLRMY R++++ WK EI+S S SE+GGYKE++ RI GL VY
Sbjct: 121 GDESALFAADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVY 180
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
+L+FESG HRVQRVP TETQGRIHTSACTVAV+PE DE E + INPA+LRIDT+RASGA
Sbjct: 181 GELRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGA 240
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQHINKTDSAVRITH+PTGIV +CQ+DRSQH+NKA AL++L ARI++ + E+ + A
Sbjct: 241 GGQHINKTDSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSERAAKDAA 300
Query: 293 MRRLLIGSVQKKSPLNIF 310
RR LIGS + + +
Sbjct: 301 TRRGLIGSGDRSDRIRTY 318
>gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
43553]
gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
43553]
Length = 356
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 226/306 (73%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M S+LE RL E+D LL Q E +++ + K RE + L P+VE + + + ED+ T
Sbjct: 1 MRSRLEHLCNRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEEDLAT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+EML+D +M+ A DEI + ++ +E ++ L+LP+D ND R++F+EIRAGTGGDES
Sbjct: 61 AQEMLSDPDMKAMAEDEIKTGRVKLESLESALQLLLLPRDPNDGRSVFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY R++E W+ E++S S SE+GGYKE+IARI G Y +LKFESG HRV
Sbjct: 121 ALFSGDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE QGRIHTSACTVAV+ EADE+ +I IN DLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPATEAQGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE+QS A R+ LIG+ +
Sbjct: 241 RITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGTGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44]
gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44]
Length = 359
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ + ++LE++++RL+ELDFLL+++++ ++K Y REH+ + I Y Y +
Sbjct: 1 MQDFLRNQLERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D +M A +EI + + +E E+++L+LPKD +D R F+EIRAGTG
Sbjct: 61 DIAAAREMLDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S S +EIGGYKE++ RI G NVY L+FESG
Sbjct: 121 GDESALFAGDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A MR+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
Length = 359
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ + ++LE++++RL+ELDFLL+++++ ++K Y REH+ + I Y Y +
Sbjct: 1 MQDFLRNQLERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D +M A +EI + + +E E+++L+LPKD +D R F+EIRAGTG
Sbjct: 61 DIAAAREMLDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S S +EIGGYKE++ RI G NVY L+FESG
Sbjct: 121 GDESALFAGDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A MR+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|397661287|ref|YP_006501987.1| peptide chain release factor [Taylorella equigenitalis ATCC 35865]
gi|394349466|gb|AFN35380.1| peptide chain release factor [Taylorella equigenitalis ATCC 35865]
gi|399115734|emb|CCG18537.1| peptide chain release factor [Taylorella equigenitalis 14/56]
Length = 359
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ S+RL E+D LL + +V +++ + K RE S + P+VEL+ ++
Sbjct: 1 MKDSMRSRLEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EM++D +++ +E+ K+RI +E +++ +LPKD +D R++F+EIRAGTG
Sbjct: 61 DLNTAVEMMSDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESA+F DL RMY R++E+ WK E++S + SE+GGY+E+IARI G VY +LK+ESG
Sbjct: 121 GDESAIFTGDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVAV+PEADE+ ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ+DRSQHKNKA A+ +L ARI D K +EQQS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVAECQDDRSQHKNKARAMSVLAARINDIKRQEQQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|372486819|ref|YP_005026384.1| peptide chain release factor 1 [Dechlorosoma suillum PS]
gi|359353372|gb|AEV24543.1| peptide chain release factor 1 [Dechlorosoma suillum PS]
Length = 365
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 178/314 (56%), Positives = 238/314 (75%), Gaps = 4/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL++ ++RL+E+D LL+ +E ++ + K +E + L P+V LY +++
Sbjct: 1 MKPSIREKLDQLTRRLEEVDALLSSEEAAKDMDQFRKLSKERAELEPVVSLYGAFRQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M+ A +E+ AK R+ ++EL+++KL+LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DLAAAQEMLADPDMKELAEEEVEAAKARLPELELDLQKLLLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIG----LNVYSKLK 176
GDESALF DL RMY R++ER W+ E++S + S++GGYKE+I RI G L YSKLK
Sbjct: 121 GDESALFAADLFRMYSRYAERQRWQVEVVSANESDLGGYKEVIVRIAGNAAGLGAYSKLK 180
Query: 177 FESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQH 236
FESG HRVQRVP TETQGRIHTSACTVAV+PE DE+ D+ +NPADLRIDTYRASGAGGQH
Sbjct: 181 FESGGHRVQRVPATETQGRIHTSACTVAVMPEVDEVADVELNPADLRIDTYRASGAGGQH 240
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
INKTDSAVR+TH+PTGIV +CQ+ RSQH NKA ALK+L ARIKD ++REQQ+ A R+
Sbjct: 241 INKTDSAVRVTHLPTGIVAECQDGRSQHANKASALKVLAARIKDVQVREQQAKEAATRKS 300
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 301 LVGSGDRSERIRTY 314
>gi|359800015|ref|ZP_09302567.1| peptide chain release factor 1 [Achromobacter arsenitoxydans SY8]
gi|359362127|gb|EHK63872.1| peptide chain release factor 1 [Achromobacter arsenitoxydans SY8]
Length = 360
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 229/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE RL E+D LL + E +++ + K RE + L P+VE + + + E
Sbjct: 1 MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D E++ A DEI + ++ +E ++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLAAAQEMLSDPELKAMAEDEIKAGRGKLESLESALQLLLLPRDPNDGRSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++ EAD + +I INP++LRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAIMAEADAMSEIVINPSELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE+QS A R+ LIG+
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEERERQSKEAAERKSLIGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|422323795|ref|ZP_16404834.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
Length = 360
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 230/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE RL E+D LL + E +++ + K RE + L P+VE + + + E
Sbjct: 1 MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D E++ A DEI + ++ +E ++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLADPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++ EADE+ +I INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238692839|sp|B1XSY0.1|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 359
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL+ RL EL+ LLT +E ++ Y K REHS + +VE + YK+
Sbjct: 1 MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EM D EM+ FA +E A + +E ++KL+LPKD+ND+RN+F+EIRAGTG
Sbjct: 61 DAQAAEEMRKDPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE ALF DLLRMY RF+ER WK E++S + S++GGYKE++ R++G VYS+LKFESG
Sbjct: 121 GDEGALFAGDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+E + INPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPQTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG VV+CQ+DRSQH+N+ A+K+L++RI D++ RE+ A+ R+ L+G+
Sbjct: 241 DSAIRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|386815312|ref|ZP_10102530.1| bacterial peptide chain release factor 1 (bRF-1) [Thiothrix nivea
DSM 5205]
gi|386419888|gb|EIJ33723.1| bacterial peptide chain release factor 1 (bRF-1) [Thiothrix nivea
DSM 5205]
Length = 359
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE S+R E+ LL + +V N + + K E+S L P+ + ++ Y++ +
Sbjct: 1 MKASILQKLETLSERYAEIAALLGEPDVIGNQEQFRKLSIEYSQLEPVAQGFHAYQQTSA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EML D EMR A +E++ AK R ++E +++KL+LPKD +D N+F+EIRAGTG
Sbjct: 61 DIATAQEMLTDPEMREMAEEELDTAKTRRAELETDLQKLLLPKDPHDNSNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS++ E GGYKEII R+IG YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYTEMRRWQIEIISQNEGEHGGYKEIITRVIGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVAV+PE DE+E +INPADL+IDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRIHTSAATVAVMPEVDEVEATDINPADLKIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+PTGIVV+CQ++RSQHKN+A A+ +L ARI + + ++Q + A+ R+ L+GS
Sbjct: 241 ESAIRITHLPTGIVVECQDERSQHKNRAKAMGLLQARIFEGERQKQAAEQAETRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 360
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 230/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL+ELDFLL+++++ +++ Y REH+ + I Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYARYRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M + A +EI+ A+ + +E E+++L+LP+D ++ RN F+EIRAGTG
Sbjct: 61 DLAGAREMLDDPDMADMAREEISAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK EI+S S +EIGGYKE++ R+ G VY L+FESG
Sbjct: 121 GDESALFAGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ L+GS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110]
gi|259585259|sp|C5CXW3.1|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110]
Length = 362
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +LE++++RL ELDFLL+++++ +++ Y REH+ + I Y YK+
Sbjct: 1 MKTFLRHQLERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A EML D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DIAGAAEMLEDPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R+ ER W+ E++S S SE+GGYKE++ RI G +V+ +L+FESG
Sbjct: 121 GDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQH+NKA AL++L ARI++ E+ + A MR+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|423014410|ref|ZP_17005131.1| peptide chain release factor 1 [Achromobacter xylosoxidans AXX-A]
gi|338782591|gb|EGP46963.1| peptide chain release factor 1 [Achromobacter xylosoxidans AXX-A]
Length = 360
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE RL E+D LL + E +++ + K RE + L P+VE + + + E
Sbjct: 1 MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D E++ A DEI + ++ +E ++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLSDPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIEGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++ EAD + +I INP++LRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAIMAEADAMSEIVINPSELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEVRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|319779045|ref|YP_004129958.1| peptide chain release factor 1 [Taylorella equigenitalis MCE9]
gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
Length = 355
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 233/306 (76%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M S+LE+ S+RL E+D LL + +V +++ + K RE S + P+VEL+ ++ D+ T
Sbjct: 1 MRSRLEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNT 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A EM++D +++ +E+ K+RI +E +++ +LPKD +D R++F+EIRAGTGGDES
Sbjct: 61 AVEMMSDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
A+F DL RMY R++E+ WK E++S + SE+GGY+E+IARI G VY +LK+ESG HRV
Sbjct: 121 AIFTGDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE+QGR+HTSACTVAV+PEADE+ ++ +NPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIV +CQ+DRSQHKNKA A+ +L ARI D K +EQQS A R+ L+GS +
Sbjct: 241 RITHLPTGIVAECQDDRSQHKNKARAMSVLAARINDIKRQEQQSKEAAERKSLVGSGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8]
gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8]
Length = 360
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE RL E+D LL + E +++ + K RE + L P+VE + + + +
Sbjct: 1 MKSSMRSRLEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D ++++ A DEI + ++ ++E ++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLAAAQEMLSDPDLKSMAEDEIKSGRAKLEELEAALQLLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVA++ EADE+ +I INP DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|398809946|ref|ZP_10568784.1| peptide chain release factor 1 [Variovorax sp. CF313]
gi|398084568|gb|EJL75249.1| peptide chain release factor 1 [Variovorax sp. CF313]
Length = 362
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 229/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +LE++++RL ELDFLL+++++ +++ Y REH+ + I Y Y++
Sbjct: 1 MKSFLRHQLERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYERYRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DIAGAREMLDDPDMAEMAKEEIAGAEAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R+ ER W+ E++S S SE+GGYKE++ RI+G V+ L+FESG
Sbjct: 121 GDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIVGDEVFGHLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQH+NKA AL++L ARI++ E+ + A MR+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|407937645|ref|YP_006853286.1| peptide chain release factor 1 [Acidovorax sp. KKS102]
gi|407895439|gb|AFU44648.1| peptide chain release factor 1 [Acidovorax sp. KKS102]
Length = 362
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 227/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ +++ Y + EH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLGELDFLLSREDIMSDMAQYRRISVEHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLAGAREMLADPDMAEMAQEEITSAEAELVQLEDELQRLLLPKDPDDARNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK EI+S + SE+GGYKEI+ R+ G +VY LKFESG
Sbjct: 121 GDESALFAADLTRMYTRYAATQGWKVEIMSANESELGGYKEIVLRVEGDHVYGALKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|395006149|ref|ZP_10389987.1| peptide chain release factor 1 [Acidovorax sp. CF316]
gi|394315899|gb|EJE52666.1| peptide chain release factor 1 [Acidovorax sp. CF316]
Length = 362
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 225/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++LE++++RL ELDFLL+++++ ++ Y REH+ + + Y Y +
Sbjct: 1 MKTFLRNQLERYAQRLGELDFLLSREDIMGDMAQYRLLSREHAEVTQVAGRYARYVQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLAGAREMLADPDMAEMAQEEIASAEAELLQLEDELQRLLLPKDPDDTRNAFMEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S + +E+GGYKEI+ RI G NVY LKFESG
Sbjct: 121 GDESALFAGDLTRMYSRYAANVGWKVEVVSENAAELGGYKEIVLRIEGDNVYGTLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDETEAIKLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|422349014|ref|ZP_16429906.1| peptide chain release factor 1 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658774|gb|EKB31638.1| peptide chain release factor 1 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 358
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 229/296 (77%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M SKL + ++RL+E+D +L +++ + +E + + P+V+ + + ++ DI T
Sbjct: 6 MRSKLRQLARRLEEIDGMLADPACASDMSKFRALTKERADIEPVVKKHLELESVDMDIST 65
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A+ ML D EM+ FA +EI A+K++ IE E++ L+LPKD ND RNIF+EIRAGTGGDES
Sbjct: 66 AQGMLEDPEMKAFAQEEILEAQKKLEVIEHELQILLLPKDPNDSRNIFLEIRAGTGGDES 125
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DLLRMY+R++E + W+ EI+S++ SE+GGYKE+I RIIG YSKLKFESG HRV
Sbjct: 126 ALFAGDLLRMYLRYAEDHRWQTEIVSKNDSELGGYKEVIVRIIGEGAYSKLKFESGGHRV 185
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE+QGR+HTSACTVAV+PE DEI ++N+NPADLRID +RASGAGGQH+ KTDSAV
Sbjct: 186 QRVPATESQGRVHTSACTVAVLPELDEIGEVNLNPADLRIDVFRASGAGGQHVQKTDSAV 245
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
RITH+PTG+VV+CQ++RSQ +NKA A+ +L +R+ +++ EQQ+ A R+ LIGS
Sbjct: 246 RITHLPTGMVVECQDERSQTQNKARAMAVLASRLHAAQVAEQQAKEASERKSLIGS 301
>gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105]
gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105]
Length = 360
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 225/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M ++L + ++RL +L+ L+ + N++ + RE S L P E + Y I
Sbjct: 1 MKDSMRNRLTRLAERLADLEEFLSSQNAANDMAQFKAITRERSELLPATERFAEYLSIEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E L+D +MR+ A +EI + ++ +E ++++L+LPKD ND RN +EIRAGTG
Sbjct: 61 DLNTAQEWLSDPDMRDMAREEIAQNEAKLAQLEADLQRLLLPKDPNDHRNAMLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ E++S S SE+GGYKE+I R+ G +VY LKFESG
Sbjct: 121 GDESALFAGDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRLAGDHVYKHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E DE E I INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ++RSQHKNKA A+K+L R++D RE+Q+ A RR L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDERSQHKNKAKAMKVLNVRLQDKIDRERQAAEASERRSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|389873756|ref|YP_006381175.1| peptide chain release factor 1 [Advenella kashmirensis WT001]
gi|388539005|gb|AFK64193.1| peptide chain release factor 1 [Advenella kashmirensis WT001]
Length = 361
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ S RL E+D LL + + N++ + K RE + + P+V L+ +Y+
Sbjct: 1 MKSSMRSRLEQISHRLIEVDALLAEPDTANDMDRFRKLSRERAEIDPVVMLFRSYEATEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A +M +D E+R A +E+ LAK R+ +++ +++ +LP+D +D R++F+E+RAGTG
Sbjct: 61 DMQAAMDMSSDPELREMAEEELKLAKARLEELQEQLQVQLLPRDPDDGRSVFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESA+F DL RMY R++E+ WK E+IS + SE+GGY+E+IAR+ G VY +LK+ESG
Sbjct: 121 GDESAIFSGDLFRMYSRYAEQKGWKVEVISENESEMGGYREVIARVDGDGVYGRLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVAV+PEADEI ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPETESQGRVHTSACTVAVLPEADEIAEVALNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQHKNKA A+ +L ARI D + ++QQ A R+ L+G+
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHKNKARAMSVLAARINDIERQKQQQKEAAERKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|399117370|emb|CCG20185.1| peptide chain release factor [Taylorella asinigenitalis 14/45]
Length = 359
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ S+RL E+D LL + +V N++ + K RE S + P+V L+ +
Sbjct: 1 MKDSMRSRLEQLSQRLVEVDALLAEPDVANDMDRFRKLSRERSEIDPVVALFKEFVAAES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A EM++D E++ +E+ K+R+ +E +++ +LPKD +D R++F+EIRAGTG
Sbjct: 61 DLEAAVEMMSDPELKEMGEEEMKATKERLEQLEEKLQLELLPKDPDDARSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESA+F DL RMY R++E+ W+ E++S + SE+GGY+E+IARI G VY +LK+ESG
Sbjct: 121 GDESAIFSGDLFRMYSRYAEQKGWRVELMSENPSELGGYREVIARIEGDGVYGQLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVAV+PEADE+ ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPETESQGRVHTSACTVAVMPEADELAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQHKNKA A+ +L ARI D + +EQQS A R+ L+G+
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHKNKARAMSVLAARINDIQRQEQQSKEAAERKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|365092377|ref|ZP_09329525.1| peptide chain release factor 1 [Acidovorax sp. NO-1]
gi|363415501|gb|EHL22628.1| peptide chain release factor 1 [Acidovorax sp. NO-1]
Length = 362
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 165/310 (53%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ +++ Y + EH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLGELDFLLSREDIMSDMAQYRRISVEHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M + A +EI ++ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLAGAREMLEDPDMADMAREEIESSEAELVQLEDELQRLLLPKDPDDARNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S + +E+GGYKEI+ RI G +VY LKFESG
Sbjct: 121 GDESALFAGDLTRMYTRYAANVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
Length = 362
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +LE++ +RL ELDFLL+++++ +++ Y REH+ + I Y Y++
Sbjct: 1 MKSFLRHQLERYVQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI AKEML+D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DIAGAKEMLDDPDMAEMAREEIAGAEAELVQLEEELQRLLLPKDPDDARNAFMEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R+ ER + EI+S S SE+GGYKE++ RI+G V+ KL+FESG
Sbjct: 121 GDESALFAGDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRIVGDEVFGKLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQH+NKA AL++L ARI++ E+ + A MR+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42]
gi|166223524|sp|A1W4B8.1|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp.
JS42]
Length = 367
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 229/318 (72%), Gaps = 8/318 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL+ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI+ A+ + +E E+++L+LPKD +D+RN FIEIRAGTG
Sbjct: 61 DLAGAREMLEDPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI--------IGLNVY 172
GDESALF DL RMY R++ WK E++S + SEIGGYKE++ RI G VY
Sbjct: 121 GDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSGSGVY 180
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LKFESG HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGA
Sbjct: 181 GALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGA 240
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQHINKTDSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A
Sbjct: 241 GGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAA 300
Query: 293 MRRLLIGSVQKKSPLNIF 310
+R+ LIGS + + +
Sbjct: 301 LRKGLIGSGDRSDRIRTY 318
>gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
gi|254790879|sp|B9ME05.1|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
Length = 367
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 229/318 (72%), Gaps = 8/318 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL+ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI+ A+ + +E E+++L+LPKD +D+RN FIEIRAGTG
Sbjct: 61 DLAGAREMLEDPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI--------IGLNVY 172
GDESALF DL RMY R++ WK E++S + SEIGGYKE++ RI G VY
Sbjct: 121 GDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVY 180
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LKFESG HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGA
Sbjct: 181 GALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGA 240
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQHINKTDSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A
Sbjct: 241 GGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAA 300
Query: 293 MRRLLIGSVQKKSPLNIF 310
+R+ LIGS + + +
Sbjct: 301 LRKGLIGSGDRSDRIRTY 318
>gi|333912789|ref|YP_004486521.1| peptide chain release factor 1 [Delftia sp. Cs1-4]
gi|333742989|gb|AEF88166.1| Peptide chain release factor 1 [Delftia sp. Cs1-4]
Length = 360
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 230/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ + +LE++++RL+EL+FLL+++++ ++K Y REH+ + I Y +++
Sbjct: 1 MQDFLRQQLERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M + A +EI A+ + +E E+++L+LPKD +D RN ++EIRAGTG
Sbjct: 61 DLAAAREMLSDPDMADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R + WK EI+S + SE+GGYKE++ R+ G +VY +L+FESG
Sbjct: 121 GDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGADVYGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L AR+++ + E+++ A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSEREAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|348589614|ref|YP_004874076.1| peptide chain release factor 1 [Taylorella asinigenitalis MCE3]
gi|347973518|gb|AEP36053.1| Peptide chain release factor 1 [Taylorella asinigenitalis MCE3]
Length = 355
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/306 (53%), Positives = 231/306 (75%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M S+LE+ S+RL E+D LL + +V N++ + K RE S + P+V L+ ++ D+
Sbjct: 1 MRSRLEQLSQRLVEVDALLAEPDVANDMDRFRKLSRERSEIDPVVALFKEFEAAESDLEA 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
A EM++D E++ +E+ K+R+ +E +++ +LPKD +D R++F+EIRAGTGGDES
Sbjct: 61 AVEMMSDPELKEMGEEEMKATKERLEQLEEKLQLELLPKDPDDARSVFLEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
A+F DL RMY R++E+ W+ E++S + SE+GGY+E+IARI G VY +LK+ESG HRV
Sbjct: 121 AIFSGDLFRMYSRYAEQKGWRVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE+QGR+HTSACTVAV+PEADE+ ++ +NPADLRIDT+RASGAGGQHINKTDSAV
Sbjct: 181 QRVPETESQGRVHTSACTVAVMPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAV 240
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITHIPTGIV +CQ+DRSQHKNKA A+ +L ARI D + +EQQS A R+ L+G+ +
Sbjct: 241 RITHIPTGIVAECQDDRSQHKNKARAMSVLAARINDIQRQEQQSKEAAERKSLVGTGDRS 300
Query: 305 SPLNIF 310
+ +
Sbjct: 301 ERIRTY 306
>gi|378822526|ref|ZP_09845291.1| peptide chain release factor 1 [Sutterella parvirubra YIT 11816]
gi|378598646|gb|EHY31769.1| peptide chain release factor 1 [Sutterella parvirubra YIT 11816]
Length = 359
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
++ M +KL S+R++E+D +L E N++ + RE S L P+ +L+ +++
Sbjct: 2 LQDSMRAKLGAMSRRIEEIDRMLAAPETANDMNRFRDLTRERSDLEPVTKLWTDFQGAEA 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E+ D +MR+FA +E+ A+ R+ + E++ +LPKD ND+RNIF+EIRAGTG
Sbjct: 62 DLATAEELRADPDMRDFAEEEVRAAEARMETLVEELRIALLPKDPNDERNIFLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++E W+ EI+SRS SE+GGY+E+I R+IG YSKLKFESG
Sbjct: 122 GDESALFAGDLLRMYLRYAEGQGWRTEIVSRSESELGGYREVIVRVIGQGAYSKLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE DE+ D+ +NPADLRID +RASGAGGQH+ KT
Sbjct: 182 GHRVQRVPVTESQGRIHTSACTVAVLPEMDEVGDVVLNPADLRIDVFRASGAGGQHVQKT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+ V+CQ++RSQ +NKA A+ +L ARI+ +++ EQQ+ A RR L+GS
Sbjct: 242 DSAVRITHLPTGMTVECQDERSQTQNKARAMAVLAARIRAAQVAEQQAKEASERRSLVGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSERIRTY 311
>gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
gi|238687199|sp|A9BP60.1|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
Length = 360
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 230/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ + +LE++++RL+EL+FLL+++++ ++K Y REH+ + I Y +++
Sbjct: 1 MQDFLRQQLERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++ML+D +M + A +EI A+ + +E E+++L+LPKD +D RN ++EIRAGTG
Sbjct: 61 DLAAAQDMLSDPDMADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R + WK EI+S + SE+GGYKE++ R+ G +VY +L+FESG
Sbjct: 121 GDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L AR+++ + E+++ A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSEREAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|351730264|ref|ZP_08947955.1| peptide chain release factor 1 [Acidovorax radicis N35]
Length = 370
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/318 (52%), Positives = 226/318 (71%), Gaps = 8/318 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ +++ Y + EH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLGELDFLLSREDIMSDMAQYRRISVEHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + + E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DLAGAREMLADPDMAEMAQEEITSAEAELLQLADELQRLLLPKDPDDARNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI--------IGLNVY 172
GDESALF DL RMY R+++R WK EI+S + +E+GGYKEI+ RI G VY
Sbjct: 121 GDESALFAGDLTRMYTRYADRVGWKVEIVSENAAELGGYKEIVLRIEGQPGTGPSGSGVY 180
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LKFESG HRVQRVP TETQGRIHTSACTVAV+PE DE E I +NPADLRIDT+RASGA
Sbjct: 181 GTLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGA 240
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQHINKTDSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ E+ + A
Sbjct: 241 GGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKDRSERAAKEAA 300
Query: 293 MRRLLIGSVQKKSPLNIF 310
+R+ LIGS + + +
Sbjct: 301 LRKGLIGSGDRSDRIRTY 318
>gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9]
gi|254790885|sp|C1D5R7.1|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9]
Length = 359
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL + S RL E+ LL +V ++ Y + REH+ L P+VE Y +++
Sbjct: 1 MKPSILTKLAQLSDRLDEVTGLLGDPDVTRDMDAYRRLTREHAELTPVVEQYLAWRQTEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ +A+++L+D +M+ A E++ ++R+ +ELE++KL+LPKD ND+RNIF+E+RAGTG
Sbjct: 61 DLASARDLLDDPDMKELAEAELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++ERN W+ EI+S S +++GG+KE+IARI+G YS+LKFESG
Sbjct: 121 GDEAALFAADLFRMYSRYAERNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADE+ + +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNKA AL +L ARI+D + R +Q A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKARALAVLAARIQDVQQRARQQKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|451822790|ref|YP_007459064.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775590|gb|AGF46631.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 358
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +LE S RLKE+D +L V +NI+++ K E S + P+V+ ++ + +
Sbjct: 1 MKLSMRKRLEDLSDRLKEIDLMLADSAVFSNIEEFRKLSCERSEIEPVVKKFSEFLSVEF 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
I+ A+++L D ++++ A +EI KK + ++E ++ L++PKD ND R+ F+EIRAGTG
Sbjct: 61 AILNAQDILADPDLKDLAEEEIKFNKKNLVELENSLQLLLIPKDPNDDRSFFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +DLLRMYIR++E+ W+ E+IS S+S+ GGYKE+I RI G YS LKFESG
Sbjct: 121 GDESALFSSDLLRMYIRYAEQKGWRVELISESVSDFGGYKEVIIRIDGHGAYSHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ EAD + D++IN +D+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAVMLEADAVNDVSINSSDIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+K+L AR+KD ++RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMKVLAARLKDKEIRELQNKEAAERKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1]
gi|119361505|sp|Q0AC04.1|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola
ehrlichii MLHE-1]
Length = 361
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 233/312 (74%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE+ +R +E+ LL + + ++ K + RE++ L P++ N+Y++ +
Sbjct: 1 MKASIRNKLERLRERHEEISALLAEPDTASDQKRFAALSREYAQLEPVIAELNHYQETEQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +A+EM +DLE+R A +EI+ A+ R+ +E E++ L+LP D ND RN+++EIRAG
Sbjct: 61 ALASAREMARDDDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DLLRMY R++ER+ W+ E IS S E GGYKE+I RI G +S+LKFE
Sbjct: 121 TGGDEAALFAGDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE D +EDI INPA+LR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A AL +L AR+K+++ EQ + + RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQSERSQHKNRAQALALLQARLKNAQQAEQSAQQTEQRRQLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|429463159|ref|YP_007184622.1| peptide chain release factor 1 [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811216|ref|YP_007447671.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338673|gb|AFZ83096.1| peptide chain release factor 1 [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776374|gb|AGF47373.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 358
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 226/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +LE+ S RLKE+D +L + V +NI D+ K E S + P+VE ++ I
Sbjct: 1 MKQSMRKRLEELSDRLKEIDLMLAESSVFSNIDDFRKLSCERSEIAPVVEKFSELVSIEN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
I A EM++D E++N A +EI K+ + +E + L+LPKD ND R+ F+EIRAGTG
Sbjct: 61 YISEAYEMISDPELKNLAEEEIKSNKQILEKLESALHILLLPKDPNDDRSFFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDES LF DLLRMYIR++ER WK ++IS SLS+ GGYKE+I RI G + Y+ L+FESG
Sbjct: 121 GDESTLFSADLLRMYIRYAERKGWKTDLISESLSDFGGYKEVIIRIDGRSAYANLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ EAD + DI IN D+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPDTETQGRIHTSACTVAVMLEADTVSDIVINNNDIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQH+NK A+++L AR+KD ++R+ Q+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHRNKEKAMRVLAARLKDKEIRDLQNKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
33394]
gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
33394]
Length = 358
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ + RL+E+ LL E +++ +Y + +EH+ L PIVE Y Y +
Sbjct: 1 MKPSILDKLQNLAHRLEEVTALLGSPEATSDMDNYRRLNQEHAELTPIVETYRAYTQAES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++L ++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLAEAQEMLSDPEMKDFAAEEIEAAKAKIEMLDLALQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + S++GGYKE+I R++GL YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRLVGLGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ I +N DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NK ALK+L AR+ D + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLNDMQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
Length = 360
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|402702451|ref|ZP_10850430.1| peptide chain release factor 1 [Pseudomonas fragi A22]
Length = 360
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y + K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYGQWLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L ND +MR A++E+ AK+R+ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDNDPDMREMAVEEVREAKERLLELEQDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER WK EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAERRGWKLEILSENSGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE+QGRIHTSACTVAV+PE DE E I INP+DLR+DTYR+SGAGGQH+N
Sbjct: 181 SGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPSDLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+ L+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
gi|229470352|sp|B1JEP6.1|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
Length = 360
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE+S + P++ Y ++K+ +
Sbjct: 1 MKASLLNKLDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L D + MR A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDADPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKEIIAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
gi|166223590|sp|A5VYG5.1|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
putida F1]
Length = 360
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R AL+E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|407363822|ref|ZP_11110354.1| peptide chain release factor 1 [Pseudomonas mandelii JR-1]
Length = 360
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/315 (53%), Positives = 226/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVATYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+++ DIE +++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKEQLIDIEASLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S ++ E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENIGEHGGYKEVIARVEGENVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESGVHRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQETIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|386010393|ref|YP_005928670.1| protein PrfA [Pseudomonas putida BIRD-1]
gi|395447154|ref|YP_006387407.1| PrfA [Pseudomonas putida ND6]
gi|397693751|ref|YP_006531631.1| peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
gi|421524618|ref|ZP_15971239.1| peptide chain release factor 1 [Pseudomonas putida LS46]
gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
gi|388561151|gb|AFK70292.1| PrfA [Pseudomonas putida ND6]
gi|397330481|gb|AFO46840.1| Peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
gi|402751081|gb|EJX11594.1| peptide chain release factor 1 [Pseudomonas putida LS46]
Length = 360
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
gi|32171521|sp|Q88PW5.1|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
Length = 360
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNALASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
gi|119361589|sp|Q21YY9.1|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
ferrireducens T118]
Length = 366
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/314 (53%), Positives = 224/314 (71%), Gaps = 4/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L +++ RL EL+FLL+++++ ++K + REH+ + + + Y+++
Sbjct: 1 MKPFLRQQLARYTDRLGELEFLLSREDIMQDMKQFLLLSREHTEVGAVASRWARYQQLEA 60
Query: 61 DIITAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
D+ A+E+L +D +M A +EI+ A + +E E+++++LPKD +D RN F+EIR
Sbjct: 61 DLSGAQELLRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDARNAFVEIR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLK 176
AGTGGDESALF DLLRMY R+ ER WK EIIS S SE+GGYKE++ +I G +VY LK
Sbjct: 121 AGTGGDESALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGDHVYGALK 180
Query: 177 FESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQH 236
FESG HRVQRVP TETQGRIHTSACTVAV+ E DE I INPADLRIDTYRASGAGGQH
Sbjct: 181 FESGGHRVQRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRASGAGGQH 240
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
INKTDSAVRITH+PTGIV +CQ+ RSQH NKA ALK+L ARI + E+ + A R+
Sbjct: 241 INKTDSAVRITHLPTGIVAECQDGRSQHSNKAQALKVLTARIHEKDRSERAAKDAAERKG 300
Query: 297 LIGSVQKKSPLNIF 310
LIGS + + +
Sbjct: 301 LIGSGDRSDRIRTY 314
>gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1]
gi|166223521|sp|A1TTC4.1|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax
citrulli AAC00-1]
Length = 360
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/310 (52%), Positives = 229/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL+ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQVAGRYTRYRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M + A +EI A+ + +E E+++L+LP+D ++ RN F+EIRAGTG
Sbjct: 61 DLAGAREMLDDPDMADMAREEIAAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK EI+S S +EIGGYKE++ R+ G VY L+FESG
Sbjct: 121 GDESALFAGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ L+GS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|359782584|ref|ZP_09285804.1| peptide chain release factor 1 [Pseudomonas psychrotolerans L19]
gi|359369404|gb|EHK69975.1| peptide chain release factor 1 [Pseudomonas psychrotolerans L19]
Length = 360
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ R +EL LL EV ++ + +E++ L P+ + + Y+K+
Sbjct: 1 MKTSLLHKLDGLQDRFEELTALLGDAEVISDQTQFRAYSKEYAELEPVSQAFTEYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ AK R+ ++E E+++++LP+D ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAEEEVGTAKARLQELEDELQRMMLPRDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S + E GG+KE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAERQGWRLEVLSENEGEHGGFKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + + RRLL+
Sbjct: 241 KTDSAVRITHLPTGIVVECQEERSQHKNRAKAMAWLSAKLNDQQDAAAHKEMSDTRRLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398848323|ref|ZP_10605144.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
gi|398248763|gb|EJN34164.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
Length = 360
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y +++K+ +
Sbjct: 1 MKASLLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIAAYQDWRKVQD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L D + +R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDADPDLREMAVEEVRDAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|451811945|ref|YP_007448399.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451777847|gb|AGF48795.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 360
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 232/311 (74%), Gaps = 2/311 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVR-EHSFLYPIVELYNNYKKIN 59
MK M +LE+ S RL E+D LL+ +E+ ++I DY +K+ E S + PIV L+N++
Sbjct: 1 MKSSMRMRLEEISNRLLEIDMLLSDQEIASDI-DYLRKLSCERSEIEPIVTLFNSFLLSE 59
Query: 60 EDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
D+ A EM++D +++ A +EI +++ RI +E ++ +LPKD ND R F+EIRAGT
Sbjct: 60 SDLEAANEMISDPDLKEMAEEEIKISRNRIEKLENDLLLSLLPKDINDDRGFFVEIRAGT 119
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDESALF DLLRMYIR++ER W EIIS + S++GGYKE+I RI G Y +L+FES
Sbjct: 120 GGDESALFSADLLRMYIRYAERMGWSVEIISANSSDLGGYKEVIIRIEGNGAYGRLRFES 179
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQR+P+TE QGRIHTSACTVAV+ E DE+ DI I+P+D+RIDT+RASGAGGQHINK
Sbjct: 180 GGHRVQRIPETENQGRIHTSACTVAVMLEVDEVNDIIIDPSDIRIDTFRASGAGGQHINK 239
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSAVRITH+P+G+VV+CQ+DRSQH+NK A+K+L AR+KD ++REQQ A R+ LIG
Sbjct: 240 TDSAVRITHLPSGLVVECQDDRSQHRNKEKAMKVLSARLKDLEIREQQEKEASERKSLIG 299
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 300 SGDRSERIRTY 310
>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 360
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY K+
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR+ A++E+ K+++ D+E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12]
gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12]
Length = 358
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE+ +R ELD LL + +++ + RE + L +V LY YK E
Sbjct: 1 MKPSLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKAKTE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ +L+D +M+ A EI A+ + +E +++ +LP+D +D RN+F+EIRAGTG
Sbjct: 61 DLSQAESLLSDPDMKELAQQEIQDARAALDALEAQLQVALLPRDPDDSRNVFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W E+IS S S++GGYKE+I R+ G Y LK+ESG
Sbjct: 121 GEESALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRVAGEGAYGLLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTETQGRIHTSA TVAV+PE DE + I INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ++RSQH+NKA AL +L AR+ + + + +Q+ A R+ L+GS
Sbjct: 241 DSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSRQAEEAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|398876015|ref|ZP_10631175.1| peptide chain release factor 1 [Pseudomonas sp. GM67]
gi|398882394|ref|ZP_10637362.1| peptide chain release factor 1 [Pseudomonas sp. GM60]
gi|398198936|gb|EJM85886.1| peptide chain release factor 1 [Pseudomonas sp. GM60]
gi|398205307|gb|EJM92091.1| peptide chain release factor 1 [Pseudomonas sp. GM67]
Length = 360
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV+ Y K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVDAYKQLLKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L ND +MR A++E+ AK+++ +IE +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDNDPDMREMAVEEVREAKEQLIEIEASLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|389686011|ref|ZP_10177334.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
gi|399008556|ref|ZP_10711026.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
gi|425901493|ref|ZP_18878084.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388550353|gb|EIM13623.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
gi|397883269|gb|EJK99755.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398115992|gb|EJM05763.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
Length = 360
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIVE Y K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVETYKQVLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEQLVELESTLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|422648190|ref|ZP_16711314.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 360
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY K+
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ D+E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|388470749|ref|ZP_10144958.1| peptide chain release factor 1 [Pseudomonas synxantha BG33R]
gi|388007446|gb|EIK68712.1| peptide chain release factor 1 [Pseudomonas synxantha BG33R]
Length = 360
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y + K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLSKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L ND +MR A++E+ AK+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDNDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398866181|ref|ZP_10621681.1| peptide chain release factor 1 [Pseudomonas sp. GM78]
gi|398241518|gb|EJN27168.1| peptide chain release factor 1 [Pseudomonas sp. GM78]
Length = 360
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIVE Y K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRAYSKEYAEVEPIVEAYKQLLKVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+R+ ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKERLVELEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|451812672|ref|YP_007449125.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|451778641|gb|AGF49521.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 360
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/311 (54%), Positives = 230/311 (73%), Gaps = 2/311 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVR-EHSFLYPIVELYNNYKKIN 59
MK M ++LE+ S RL E+D LL +V ++I DY +K+ E S + P+V L+N++ +
Sbjct: 1 MKLSMRTRLEEISNRLLEIDILLADHDVTSDI-DYLRKLSCERSEIEPVVTLFNSFLQYE 59
Query: 60 EDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
D+ A EM++D E++ A +EI +A+ I +E +++ +LPKD ND R F+EIRAG
Sbjct: 60 SDLKAANEMMSDPELKEMAEEEIKIARSCIEKLENDLQVSLLPKDTNDDRGFFVEIRAGA 119
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDESALF DLLRMYIR++ER W EIIS + S++GGYKE+I RI G Y +LKFES
Sbjct: 120 GGDESALFSADLLRMYIRYAERMGWFVEIISANSSDLGGYKEVIIRIEGNGAYGRLKFES 179
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQR+P+TE QGRIHTSACTVAV+ EADE+ +I I+ D+R+DT+RASGAGGQHINK
Sbjct: 180 GGHRVQRIPETENQGRIHTSACTVAVMLEADEVNEITIDAVDIRVDTFRASGAGGQHINK 239
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSAVRITH+P+G+VV+CQ+DRSQH+NK A+K+L AR+KD ++REQQ A R+ LIG
Sbjct: 240 TDSAVRITHLPSGLVVECQDDRSQHRNKEKAMKVLSARLKDLEIREQQKKEASERKSLIG 299
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 300 SGDRSERIRTY 310
>gi|410089575|ref|ZP_11286189.1| peptide chain release factor 1 [Pseudomonas viridiflava UASWS0038]
gi|409763110|gb|EKN48095.1| peptide chain release factor 1 [Pseudomonas viridiflava UASWS0038]
Length = 360
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P++ LYN K+
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTKFRAYSREYAEVEPVIALYNQRIKLVA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K ++ ++E E+++L+LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKLQLVELEAELQRLLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEVLSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|440739072|ref|ZP_20918594.1| peptide chain release factor 1 [Pseudomonas fluorescens BRIP34879]
gi|447915107|ref|YP_007395675.1| peptide chain release factor 1 [Pseudomonas poae RE*1-1-14]
gi|440380444|gb|ELQ17011.1| peptide chain release factor 1 [Pseudomonas fluorescens BRIP34879]
gi|445198970|gb|AGE24179.1| peptide chain release factor 1 [Pseudomonas poae RE*1-1-14]
Length = 360
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + P+V Y N K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPVVATYKNLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L ND +MR A++E+ AK+++ ++E ++++++LP+D ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDNDPDMREMAVEEVREAKEKLAELEGDLQRMLLPRDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQETIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|344941078|ref|ZP_08780366.1| Peptide chain release factor 1 [Methylobacter tundripaludum SV96]
gi|344262270|gb|EGW22541.1| Peptide chain release factor 1 [Methylobacter tundripaludum SV96]
Length = 361
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R E+ LL++ EV N + +E++ + P+V+ Y Y++ E
Sbjct: 1 MKQSIQHKLENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQQTLE 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +AKEM ND E+R A +E+N A+ ++ IE E++ L+LPKD ND RNIFIEIRAG
Sbjct: 61 SLASAKEMANDSDPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EII+ S + GGYKE+I R+ G +VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE DE++ I+INPADL++DT+RASGAGGQHIN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KT+SA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L +R+ ++ + + + R+L +
Sbjct: 241 KTESAIRITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKHHAEQSATRKLQV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|410694810|ref|YP_003625432.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
Length = 358
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE+ +R ELD LL + +++ + RE + L +V LY YK E
Sbjct: 1 MKPSLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKTKTE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ +L+D +M+ A EI A+ + +E ++ +LP+D +D RN+F+EIRAGTG
Sbjct: 61 DLSQAESLLSDPDMKELAQQEIQDARAALDALEARLQVALLPRDPDDSRNVFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W E+IS S S++GGYKE+I R+ G Y LK+ESG
Sbjct: 121 GEESALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRVAGEGAYGLLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTETQGRIHTSA TVAV+PE DE + I INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ++RSQH+NKA AL +L AR+ + + + +Q+ A R+ L+GS
Sbjct: 241 DSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQARQAEEAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|339485721|ref|YP_004700249.1| peptide chain release factor 1 [Pseudomonas putida S16]
gi|431800788|ref|YP_007227691.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
gi|338836564|gb|AEJ11369.1| peptide chain release factor 1 [Pseudomonas putida S16]
gi|430791553|gb|AGA71748.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
Length = 360
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGESVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIATERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398942263|ref|ZP_10670201.1| peptide chain release factor 1 [Pseudomonas sp. GM41(2012)]
gi|398160815|gb|EJM49070.1| peptide chain release factor 1 [Pseudomonas sp. GM41(2012)]
Length = 360
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIVE Y K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQAKFRTYSKEYAEVEPIVETYKQLLKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ DIE +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEQLIDIEASLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S ++ E GG+KE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENIGEHGGFKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INP+DLRIDTY++SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPSDLRIDTYKSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|422654390|ref|ZP_16717133.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 360
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|422587436|ref|ZP_16662107.1| peptide chain release factor 1 [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 360
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis
YIT 11859]
gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis
YIT 11859]
Length = 360
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 227/300 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL + +RL+E+D L +V +N+ + +E + + P+V Y++ E
Sbjct: 1 MKDTMRSKLTQLVRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM+ FA +EI KK I I E++ L+LPKD ND++NI++EIRAGTG
Sbjct: 61 DLAAAEEMLSDEEMKEFASEEIKATKKAIEQISSELEILLLPKDPNDEKNIYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ E +S S S++GGYKEI+ +I+G YSKLKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVAV+PEADEI D+ I+P++LRID YRASGAGGQHI KT
Sbjct: 181 GHRVQRVPETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SAVRITH+PTGIVV+CQ++RSQHKNK A+ +L++RI +++ E Q+ + MR+ LIGS
Sbjct: 241 ESAVRITHLPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQAKESSMRKSLIGS 300
>gi|399002460|ref|ZP_10705146.1| peptide chain release factor 1 [Pseudomonas sp. GM18]
gi|398124900|gb|EJM14396.1| peptide chain release factor 1 [Pseudomonas sp. GM18]
Length = 360
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV+ Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVDTYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+R+ ++E +++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKERLIELEASLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
Max13]
gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
K40]
gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422297078|ref|ZP_16384722.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
gi|407991602|gb|EKG33422.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
Length = 360
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|423689826|ref|ZP_17664346.1| peptide chain release factor 1 [Pseudomonas fluorescens SS101]
gi|388002153|gb|EIK63482.1| peptide chain release factor 1 [Pseudomonas fluorescens SS101]
Length = 360
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y N K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYKNLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|395650290|ref|ZP_10438140.1| peptide chain release factor 1 [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 360
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + P+V Y N K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPVVATYKNLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
gi|166223588|sp|Q1IEX1.1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
Length = 360
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y ++K+ +
Sbjct: 1 MKASLLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L D + +R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDADPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|358451346|ref|ZP_09161780.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
gi|385330453|ref|YP_005884404.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
gi|357224579|gb|EHJ03110.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
Length = 362
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ S R +E+ LL+ + + + RE + + PIV + ++ +
Sbjct: 1 MKPSIQSRLEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A+E+ D +MR A +E+ LA+++ +++ E+++L+LPKD ND +N+F+EIRAG
Sbjct: 61 DIEAARELAKDGDADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY+R++ER W+ E++S S E GG+KE+IAR+ G VY LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE E I +N ADLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A AL +L +R+++++ QQ + A+ R+ L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQKSMAETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398952330|ref|ZP_10674719.1| peptide chain release factor 1 [Pseudomonas sp. GM33]
gi|426411475|ref|YP_007031574.1| peptide chain release factor 1 [Pseudomonas sp. UW4]
gi|398155258|gb|EJM43708.1| peptide chain release factor 1 [Pseudomonas sp. GM33]
gi|426269692|gb|AFY21769.1| peptide chain release factor 1 [Pseudomonas sp. UW4]
Length = 360
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVGTYKELLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ +D+ A+ +L +D +MR A++E+ AK+R+ +E ++++++LPKD ND RN+F+EI
Sbjct: 58 VQDDLEGAQALLKDSDPDMREMAVEEVREAKERLVTLEADLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|395500681|ref|ZP_10432260.1| peptide chain release factor 1 [Pseudomonas sp. PAMC 25886]
Length = 360
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRTYSKEYAEVEPIVAAYTQLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK ++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398869864|ref|ZP_10625221.1| peptide chain release factor 1 [Pseudomonas sp. GM74]
gi|398914038|ref|ZP_10656762.1| peptide chain release factor 1 [Pseudomonas sp. GM49]
gi|398923536|ref|ZP_10660756.1| peptide chain release factor 1 [Pseudomonas sp. GM48]
gi|398175152|gb|EJM62919.1| peptide chain release factor 1 [Pseudomonas sp. GM48]
gi|398179247|gb|EJM66863.1| peptide chain release factor 1 [Pseudomonas sp. GM49]
gi|398210276|gb|EJM96928.1| peptide chain release factor 1 [Pseudomonas sp. GM74]
Length = 360
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVGAYKELLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ +D+ A+ +L +D +MR A++E+ AK+R+ +E ++++++LPKD ND RN+F+EI
Sbjct: 58 VQDDLEGAQALLKDSDPDMREMAVEEVREAKERLVTLEADLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
gi|119361580|sp|Q4K695.1|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
Length = 360
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKL+ R +EL LL EV ++ + +E++ + PIV Y K+
Sbjct: 1 MKASLLSKLDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L ND ++R A +E+ AK+++ ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDNDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
gi|259585227|sp|C3KDC6.1|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
Length = 360
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y + K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|387891957|ref|YP_006322254.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
gi|387160126|gb|AFJ55325.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
Length = 360
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y N K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYKNLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK ++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKDKLAELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398860967|ref|ZP_10616608.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
gi|398233986|gb|EJN19882.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
Length = 360
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVGTYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+++ +IE ++++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKEQLIEIEAQLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
gi|238692456|sp|B3PJP4.1|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
Length = 360
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE+ +R +E+ LL++ +V NN + +E++ L P+V Y Y ++
Sbjct: 1 MKSSILEKLERLKERYEEVSALLSEADVINNQARFRDLSKEYAELEPVVVAYKGYLQLLA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI AK ++ D +MR A +E+ + R+ ELE++KL+LPKD ND++N ++E+RAG
Sbjct: 61 DIEEAKHLIAEGDADMREMAEEELEGCEARLEPTELELQKLLLPKDPNDEKNCYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ EI+S+S E GG+KEII+ + G VYSKLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE+E++NIN ADLRIDTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ++RSQHKN+A A+ +L ++K + + ++ RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQEEAAHKSISEERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398889389|ref|ZP_10643232.1| peptide chain release factor 1 [Pseudomonas sp. GM55]
gi|398189511|gb|EJM76785.1| peptide chain release factor 1 [Pseudomonas sp. GM55]
Length = 360
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 224/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVNAYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+R+ +E ++++++LPKD ND RN+F+EI
Sbjct: 58 VQADLEGAQALLKDSDPDMREMAVEEVREAKERLVTLEADLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|408483921|ref|ZP_11190140.1| peptide chain release factor 1 [Pseudomonas sp. R81]
Length = 360
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + P+V Y N K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYADVEPVVATYKNLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEKLAALEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB]
gi|119361530|sp|Q479R5.1|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas
aromatica RCB]
Length = 360
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 234/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE RL E+D +L+ +++ + K RE + + P+V +N +++
Sbjct: 1 MKSSIRQKLELLVDRLDEIDRMLSAPSTASDMDQFRKLSRERAEVEPVVVQFNAFRQAEN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML+D +MR FA +E+ AK R+ ++ELE++KL+LPKD ND+R++ +EIRAGTG
Sbjct: 61 DLAEAEAMLSDPDMREFAEEEMAAAKARLPELELELQKLLLPKDPNDERSVLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF L RMY RF+ER W+ E++S S SE+GGY+EII RI G YS+LKFESG
Sbjct: 121 GDESALFAGSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRIAGNGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+ED+N+NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ+ RSQH NKA ALK+L ARIKD ++R QQ++ + R+ LIGS
Sbjct: 241 DSAVRITHLPTGIVAECQDGRSQHANKASALKVLAARIKDVQVRAQQAHISSTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 2250]
gi|416014623|ref|ZP_11562373.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. B076]
gi|416029124|ref|ZP_11572013.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406646|ref|ZP_16483670.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422584076|ref|ZP_16659191.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598325|ref|ZP_16672588.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|422604205|ref|ZP_16676222.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
301020]
gi|119361578|sp|Q48MV4.1|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
301020]
gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 360
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|381153154|ref|ZP_09865023.1| peptide chain release factor 1 [Methylomicrobium album BG8]
gi|380885126|gb|EIC31003.1| peptide chain release factor 1 [Methylomicrobium album BG8]
Length = 361
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 230/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE S+R +E+ LL+Q EV NN K +E++ + P+V+ Y Y + +
Sbjct: 1 MKDSIKLKLENLSERHEEIAALLSQSEVQNNQKQQRSLSQEYAQIGPLVDCYRRYVEAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++A+EM +D +MR A +E A+ + +E E++ L+LPKD ND RNIF+EIRAG
Sbjct: 61 RRLSAQEMAGDSDPDMRELAKEEFREAEALVESLEHELQILLLPKDPNDNRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E+IS + + GGYKEII R+ G +VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLSRMYQRYAERKGWQTEVISENPGDHGGYKEIILRVSGRDVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE DE++ I+INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGTHRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+T+SA+RITHIP+GIVV+CQ++RSQHKN+A A+ +L AR+ ++ +Q S A+ R+L +
Sbjct: 241 RTESAIRITHIPSGIVVECQDERSQHKNRARAMSLLSARLLAAEQEKQNSEQARSRKLQV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
642]
Length = 360
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|395794825|ref|ZP_10474141.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
gi|421138189|ref|ZP_15598259.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
gi|395340986|gb|EJF72811.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
gi|404510612|gb|EKA24512.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
Length = 360
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y K+
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQTKFRTYSKEYAEVEPIVGTYKQLLKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK ++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|451936200|ref|YP_007460054.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777123|gb|AGF48098.1| peptide chain release factor RF-1 [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 360
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 227/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +LE+ S RL E+D LL+ ++ +I K E S + IV L+ ++ +
Sbjct: 1 MKSSMRMRLEEISNRLLEIDMLLSDHDIAADIDQLRKLSCERSEIETIVTLFTSFLQSES 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EM++D E++ A +E+ ++K RI +E +++ +LPKD ND R F+EIRAGTG
Sbjct: 61 DLETANEMMSDPELKEMAEEEVRISKIRIEKLENDLQLSLLPKDTNDDRGFFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMYIR++E+ W EIIS + S++GGYKE+I RI G Y +LKFESG
Sbjct: 121 GDESALFSADLLRMYIRYAEKMGWLVEIISANSSDLGGYKEVIIRIEGNGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P+TE QGRIHTSACTVAV+ EADE+ D+ I+ +D+R+DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRIPETENQGRIHTSACTVAVMLEADEVNDVTIDSSDIRVDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+P+G+VV+CQ+DRSQH+NK ALK+L AR+KD ++RE+Q A R+ LIGS
Sbjct: 241 DSAVRITHLPSGLVVECQDDRSQHRNKEKALKVLSARLKDLEIREKQKKEASERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B728a]
gi|422675092|ref|ZP_16734440.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
str. M302273]
gi|440744588|ref|ZP_20923891.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
gi|75503325|sp|Q4ZXW7.1|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|63254909|gb|AAY36005.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
syringae pv. syringae B728a]
gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
str. M302273]
gi|440374006|gb|ELQ10749.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
Length = 360
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398842534|ref|ZP_10599713.1| peptide chain release factor 1 [Pseudomonas sp. GM102]
gi|398105631|gb|EJL95718.1| peptide chain release factor 1 [Pseudomonas sp. GM102]
Length = 360
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVGTYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+++ +IE ++++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKEQLIEIEAQLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIATERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|422619385|ref|ZP_16688075.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
str. M301072]
gi|422631822|ref|ZP_16697002.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
1704B]
gi|443645394|ref|ZP_21129244.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B64]
gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
1704B]
gi|443285411|gb|ELS44416.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B64]
Length = 360
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|372270577|ref|ZP_09506625.1| peptide chain release factor 1 [Marinobacterium stanieri S30]
Length = 361
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 234/315 (74%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +++KLE R +EL LL++ EV +DY RE+S L + + +N +++
Sbjct: 1 MKASIITKLEALCDRHEELAALLSEPEVIADQTRFRDYS---REYSDLEEVTKAFNAWRQ 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
ED+ +A+ ML +D +M+ A +EI+ A+++I +E E++ L+LP+D ND R++F+EI
Sbjct: 58 AGEDLESAQLMLEDDDPDMKAMAQEEIDAAREQIEALEAELQVLLLPRDPNDHRSVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++E+ W+ E+IS + E GGYKEII+R+ G +VY++L
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAEQKGWRVEVISANEGEHGGYKEIISRVAGEDVYAQL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP+TE+QGRIHTSACTVAV+PE DE ++ IN ADLR+DTYRASGAGGQ
Sbjct: 178 KFESGAHRVQRVPETESQGRIHTSACTVAVMPEMDESAEVEINKADLRVDTYRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L +R++ +++ +QQ+ A R+
Sbjct: 238 HVNKTDSAIRITHLPTGLVVECQEERSQHKNRAKAMALLASRLQQAEIDKQQAEQASARK 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|32171519|sp|Q888C1.1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 360
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVPKTE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + S A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398992801|ref|ZP_10695762.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
gi|398136257|gb|EJM25349.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
Length = 360
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + PIV Y K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQAKFRTYSKEYAEVEPIVGTYQQLLKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEQLIELEASLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2]
gi|166223585|sp|A1VKB6.1|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas
naphthalenivorans CJ2]
Length = 373
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 218/320 (68%), Gaps = 10/320 (3%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + L++ RL ELD LL+ +V +++ + REH+ + E YN
Sbjct: 1 MKPFLRHTLDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYNRLTAREA 60
Query: 61 DIITAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
D+ +A+ ML ND +M A +EIN AK I ++ ++ +++PKD +D+R FIEIR
Sbjct: 61 DLASAESMLAEAKNDPDMAEMAEEEINAAKTDIAQLDEALQLMLIPKDPDDRRAAFIEIR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI------IGLN 170
AGTGGDESALF DL R+Y RF+ER W+ EIIS S SE+GGYKE++ RI +G+
Sbjct: 121 AGTGGDESALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRIDGPTDAMGVG 180
Query: 171 VYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRAS 230
VY KL+FESG HRVQRVP TETQGRIHTSACTVAV+PE DE I INPADLRIDTYRAS
Sbjct: 181 VYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPADLRIDTYRAS 240
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNT 290
GAGGQHINKTDSAVRITH+PTGIV +CQ RSQH NKA A+K+L ARI + + Q +
Sbjct: 241 GAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARIHEKERSAQAAKD 300
Query: 291 AKMRRLLIGSVQKKSPLNIF 310
A MR+ LIGS + + +
Sbjct: 301 AAMRKGLIGSGDRSDRIRTY 320
>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
Length = 361
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ R +E+ LL+ + N + RE + + PIV + ++K +
Sbjct: 1 MKSSIQSRLEQLVDRFEEVSALLSDQGTIANQDKFRDLSREFAEIEPIVHCFQAWQKSRD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A E+ D +MR A +E+ LA+++ +++ E+++L+LPKD ND +N+F+E+RAG
Sbjct: 61 DVKEATELARDGDADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL +MY+R++ER W+ E+IS S E GGYKE+IARI G VY LKFE
Sbjct: 121 TGGDEAAIFAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE E + IN +DLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ +RSQHKN+A A+ L +R+++ ++ QQ A R+ L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKTMAATRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|409427036|ref|ZP_11261567.1| peptide chain release factor 1 [Pseudomonas sp. HYS]
Length = 360
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVAVAYAQWRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLAGAQALLKDSDPDLREMAVEEVREAKEQLAVLENQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQHIN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDIQTSAAQNAMASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|423097283|ref|ZP_17085079.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
gi|397884652|gb|EJL01135.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
Length = 360
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/315 (52%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVAAYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ +D+ A+ +L +D +MR A++E+ AK+++ ++E +++++LPKD ND RN+F+EI
Sbjct: 58 VQDDLEGAQALLKDSDPDMREMAVEEVREAKEQLVELESSLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
gi|189039985|sp|B0KNE4.1|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P+ Y + K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEIIAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|422665159|ref|ZP_16725031.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|424066162|ref|ZP_17803634.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|424070808|ref|ZP_17808240.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|440720020|ref|ZP_20900441.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
gi|440726145|ref|ZP_20906402.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|407999891|gb|EKG40261.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|408002594|gb|EKG42837.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440366742|gb|ELQ03819.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
gi|440367292|gb|ELQ04358.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ ++++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + P+V Y + K +
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK ++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398904470|ref|ZP_10652313.1| peptide chain release factor 1 [Pseudomonas sp. GM50]
gi|398175849|gb|EJM63589.1| peptide chain release factor 1 [Pseudomonas sp. GM50]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 224/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVGTYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK+++ +IE +++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKEQLIEIEARLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|429335284|ref|ZP_19215921.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
gi|428760086|gb|EKX82363.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE R +EL LL EV ++ + RE++ + P+ Y ++K+ +
Sbjct: 1 MKASLLKKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVAAGYVQWRKLQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAIEEVREAKEQLQALEDQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKEIIAR+ G VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGEAVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAMASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
Length = 360
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/310 (52%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + +E E+++++LPKD +D+RN F+EIRAGTG
Sbjct: 61 DLEGAREMLEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S + SE+GGYKE++ RI G + Y +L+FESG
Sbjct: 121 GDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601]
gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601]
Length = 371
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/310 (52%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 12 MKPFLRSQLERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREA 71
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI A+ + +E E+++++LPKD +D+RN F+EIRAGTG
Sbjct: 72 DLEGAREMLEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTG 131
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ WK E++S + SE+GGYKE++ RI G + Y +L+FESG
Sbjct: 132 GDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESG 191
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGAGGQHINKT
Sbjct: 192 GHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKT 251
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ LIGS
Sbjct: 252 DSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 311
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 312 GDRSDRIRTY 321
>gi|375107647|ref|ZP_09753908.1| peptide chain release factor 1 [Burkholderiales bacterium
JOSHI_001]
gi|374668378|gb|EHR73163.1| peptide chain release factor 1 [Burkholderiales bacterium
JOSHI_001]
Length = 360
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ RL ELD L V ++K Y RE S +V+ + +++
Sbjct: 1 MKDSLRQQLDRLEMRLAELDASLADPTVVADMKRYRALSREQSEANALVQRWRAFRQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ +L+D EM A +EI A+ + ++ EI++ +LP+D +D+RN F+EIRAGTG
Sbjct: 61 DTETAQALLDDPEMGAMAKEEIAAAQADLQRLQDEIQQALLPRDPDDERNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DL R+Y+R+ ER W+ E++S S S++GGYKE++ R+ G VY KL+FESG
Sbjct: 121 GEESALFAGDLARLYLRYCERQGWRTELMSESASDLGGYKEVVIRVEGERVYEKLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PE DE ++ INP++LRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEPDEAAEVTINPSELRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIV +CQ+DRSQH+NKA A+ +LLAR++D + +E+ + A +R+ L+GS
Sbjct: 241 DSAIRITHLPTGIVAECQDDRSQHRNKAKAMAVLLARLRDREQQERHAKEAHLRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|422659504|ref|ZP_16721929.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M302278]
Length = 360
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE++ + P+V LY ++
Sbjct: 1 MKASLLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ K+++ ++E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + S A R+LL+
Sbjct: 241 KTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|406040117|ref|ZP_11047472.1| peptide chain release factor 1 [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 362
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 226/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L +VE++ Y++ +
Sbjct: 1 MKESLRLRLDQLCDRYEELTALLADAEVISDNKRFRKLSREHSDLSEMVEVWGKYRQAEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI+TA++MLND + ++ A +EI + I +E ++ L++PKD ND + ++E+RAGTG
Sbjct: 61 DIVTAEDMLNDPDFKDMAQEEIKENRVLIEQLEADLNILMIPKDPNDANSAYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+VV+CQ +RSQHKNKA A+ +L++R++++K Q++ T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
gi|259585256|sp|C5BSZ6.1|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
Length = 360
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R E+ LL ++ + K + +E+S L P+V Y Y+ + E
Sbjct: 1 MKDSIKQKLENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRTVIE 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I AK ++ND +MR A +E+ A+ ++ +E +++KL+LPKD ND++N+F+EIRAG
Sbjct: 61 NIAEAKMLMNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EIIS + E GGYKE+I R++G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEADE E++ +N DLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ++RSQHKN+A A+ +L ARI ++ + + A R+ L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQFAAEQASERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|359395824|ref|ZP_09188876.1| Peptide chain release factor 1 [Halomonas boliviensis LC1]
gi|357970089|gb|EHJ92536.1| Peptide chain release factor 1 [Halomonas boliviensis LC1]
Length = 362
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F++R +EL LL+ +V NN + + RE++ L +V + Y+ I
Sbjct: 1 MKETLRQRLDSFTERFEELSMLLSDPDVINNQQRFRDYSREYAELEELVAAWQRYRDIET 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+++ +D +MR A E++ ++R+ ++++E+K+L++PKD +D R +F+E+RAG
Sbjct: 61 NMHEAEQLSRDSDADMRELAEMELSEGRERLAELDIELKRLLVPKDPDDGRGVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S S E GGYKEII+R+ G VY++LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEIISRVKGDGVYAQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE D++ DI+INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L A++K + + Q+ A RR L+
Sbjct: 241 TTDSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQTQADARRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378952822|ref|YP_005210310.1| peptide chain release factor 1 [Pseudomonas fluorescens F113]
gi|423699274|ref|ZP_17673764.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359762836|gb|AEV64915.1| Peptide chain release factor 1 [Pseudomonas fluorescens F113]
gi|387996495|gb|EIK57825.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
Length = 360
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/315 (52%), Positives = 223/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ R +EL LL EV N + Y K E++ + PIV Y K
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSK---EYAEVEPIVATYKQLLK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D +MR A++E+ AK ++ ++E +++++LPKD ND RN+F+EI
Sbjct: 58 VQGDLEGAQALLKDSDPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+
Sbjct: 238 HVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASERK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|387813305|ref|YP_005428787.1| peptide chain release factor RF-1 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338317|emb|CCG94364.1| peptide chain release factor RF-1 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 363
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ +R +E++ LL+ V N + RE + + P+V+ + +++ E
Sbjct: 1 MKPSIQSRLEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A E+ D +MR A +E+ A+ R +++ E+++L+LPKD ND +N+F+EIRAG
Sbjct: 61 DIDAATELAKDGDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KEIIAR+ G VY LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE E + IN ADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A AL +L +R+++++L +QQ + A+ R+ L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSVAETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
gi|166223568|sp|A1U367.1|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
aquaeolei VT8]
Length = 363
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ +R +E++ LL+ V N + RE + + P+V+ + +++ E
Sbjct: 1 MKPSIQSRLEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A E+ D +MR A +E+ A+ R +++ E+++L+LPKD ND +N+F+EIRAG
Sbjct: 61 DIDAATELAKDGDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KEIIAR+ G VY LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE E + IN ADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A AL +L +R+++++L +QQ + A+ R+ L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSMAETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Neptuniibacter caesariensis]
gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
Length = 362
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLEK S R +EL LL+ EV ++ + + + E+S L P+V+ + Y + E
Sbjct: 1 MKESILSKLEKLSDRYEELAALLSDPEVISDQEKFREYSMEYSELEPVVKAFEAYTQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ M+ +D +MR A +E K RI +E E++ L+LPKD ND RN+F+E+RAG
Sbjct: 61 DLEEAEMMMADSDPDMREMAKEEYPEVKARIESLEGELQILLLPKDPNDSRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E++S + E GGYKEII+RI+G NVYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRIVGTNVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++ E DE +I IN ADLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ +RSQHKN+A A+ +L +R++ ++ Q + A R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAEEERQAAELASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2]
gi|166223615|sp|A1WI56.1|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter
eiseniae EF01-2]
Length = 359
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+L + ++RL ELDFLL + ++ ++ Y REH+ + + Y Y +
Sbjct: 1 MKPFLRSQLARHAQRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+E+L D M A +EI+ ++ + +E E+++L+LPK+ +D RN F+EIRAGTG
Sbjct: 61 DLGAARELLADPGMAELAQEEIDSSQTELRQLEDELQRLLLPKEPDDARNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ R W+ +++S + +E+GGYKEI+ RI G VY LKFESG
Sbjct: 121 GDESALFAGDLTRMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTSACTVAV+PE D I +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L AR+++ + E+ + A +R+ LIGS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHGNKARALQVLQARLQEKERSERAAKEAALRKGLIGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSDRIRTY 310
>gi|443473457|ref|ZP_21063481.1| Peptide chain release factor 1 [Pseudomonas pseudoalcaligenes
KF707]
gi|442904194|gb|ELS29310.1| Peptide chain release factor 1 [Pseudomonas pseudoalcaligenes
KF707]
Length = 360
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E + + P++ Y ++K+
Sbjct: 1 MKASLLNKLDLLQDRYEELTALLGDAEVISDQGKFRAYSKEFAEVEPVILAYREFRKVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E++ A+ R+ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAEEEVDQARTRLVGLEDRLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVEILSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + + RRLL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQEAAAHKEMSDTRRLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|377556094|ref|ZP_09785817.1| peptide chain release factor 1 [endosymbiont of Bathymodiolus sp.]
Length = 362
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 167/302 (55%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M +++KLE+ S RL+E+ +L+ +V +N + + EH+ L P+VE + Y E
Sbjct: 1 MNASLIAKLEQLSMRLEEVGVMLSDPDVASNQNKFRELSIEHAQLTPVVEQFCEYLSAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML ND EMR A +EI K ++ +EL++KK +LPKD ND RNI IEIRAG
Sbjct: 61 DVEAARAMLLENDDEMRAMAKEEIASGKGKLERLELDLKKALLPKDPNDSRNIIIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE++LF DL +MY R+ E+ W+ E++S + E GG+KEIIARI G+NVYSKLKFE
Sbjct: 121 TGGDEASLFSGDLFKMYSRYVEKQKWQIEVMSANAGEHGGFKEIIARISGVNVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE + IE+ININ D+R+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVENIEEININMNDVRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIPT VV+CQ+ RSQHKNKA A+ +L +RI D++ + QQ A R+ L+
Sbjct: 241 KTDSAVRLTHIPTNTVVECQDGRSQHKNKAQAMSVLASRILDAQQQAQQKEQASTRKELV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|448747308|ref|ZP_21728968.1| Peptide chain release factor 1 [Halomonas titanicae BH1]
gi|445565000|gb|ELY21113.1| Peptide chain release factor 1 [Halomonas titanicae BH1]
Length = 362
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F++R +EL LL+ +V NN + + RE++ L +V + Y+ I
Sbjct: 1 MKETLRQRLDSFTERFEELAMLLSDPDVINNQQRFRDYSREYAELEELVAAWQRYRDIET 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+++ +D +MR A E++ ++R+ ++++E+K+L++PKD +D R +F+E+RAG
Sbjct: 61 NMHEAEQLSRDSDADMRELAEMELSEGRERLAELDIELKRLLVPKDPDDGRGVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S S E GGYKEII+R+ G VY++LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEIISRVKGDGVYAQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE D++ DI+INP+DLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPSDLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L A++K + + Q+ A RR L+
Sbjct: 241 TTDSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQTQADARRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|352102003|ref|ZP_08959050.1| peptide chain release factor 1 [Halomonas sp. HAL1]
gi|350600174|gb|EHA16244.1| peptide chain release factor 1 [Halomonas sp. HAL1]
Length = 362
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F++R +EL LL+ EV NN + + RE+S L +V + Y+ I
Sbjct: 1 MKETLRQRLDSFTERFEELAMLLSDPEVINNQQRFRDYSREYSELEELVAAWQRYRDIET 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+++ +D +MR A E++ ++R+ ++++E+K+L++PKD +D R +F+E+RAG
Sbjct: 61 NMHEAEQLSRDSDADMRELAEMELSEGRERLEELDIELKRLLVPKDPDDGRGVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKEII+R+ G VY++LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRGWRVEIVSASHGEQGGYKEIISRVKGDGVYAQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE D++ DI+IN ADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINSADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L A++K + + Q+ A RR L+
Sbjct: 241 TTDSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQEQADARRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|404399170|ref|ZP_10990754.1| peptide chain release factor 1 [Pseudomonas fuscovaginae UPB0736]
Length = 360
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ R +EL LL EV ++ + +E++ + PIV Y K+
Sbjct: 1 MKASLLKKLDILQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVAAYLQVLKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E AK+++ ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEAREAKEQLVELESSLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+IAR+ G +VY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKRGWRVEILSESEGEHGGYKEVIARVEGESVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|399911600|ref|ZP_10779914.1| peptide chain release factor 1 [Halomonas sp. KM-1]
Length = 362
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F +R +EL LL + EV + + RE++ L P+VE + +Y+
Sbjct: 1 MKATLRQRLDGFVERFEELAALLAEPEVIGDQPRFRDYSREYAELEPLVEAWRDYRATEG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A ++ +D EMR A E+ ++R+ +E+ +K+L++P+D +D RN+F+E+RAG
Sbjct: 61 DLDDAAQLAEDSDAEMRELAQLELEEGRERLEGLEVRLKQLLVPRDPDDGRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY R++E+ WK E+IS S E GGYKEII+R+ G VY++LKFE
Sbjct: 121 TGGDEAALFAGDLFRMYSRYAEKQGWKVEVISASHGEQGGYKEIISRVKGEGVYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+ D++INP DLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVGDVDINPVDLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L AR+K S + +Q A RR L+
Sbjct: 241 TTDSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAARLKQSAVESRQREQADTRRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|387126387|ref|YP_006294992.1| peptide chain release factor 1 [Methylophaga sp. JAM1]
gi|386273449|gb|AFI83347.1| Peptide chain release factor 1 [Methylophaga sp. JAM1]
Length = 362
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE R +E+ LL+ E N + +E++ L P+V+ + Y +
Sbjct: 1 MKDSIRHKLEALVDRHEEISGLLSDPETMANQNKFRTLSQEYAQLEPVVKHFGLYLQTLS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ M+ +D EMR A +E+ +A+++ + ++++KL+LPKD ND+RNIF+E+RAG
Sbjct: 61 DLKDAQAMMQESDPEMREMAKEELAIAEEKQEQLAIDLQKLLLPKDPNDQRNIFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E+++ E GGYKEIIARI+G YS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYTRYAESRRWQVEVLNAQEGEHGGYKEIIARIVGDGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEADEI+ I INPAD+++DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEADEIDQIEINPADIKMDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITHIPTGI+V+CQ +RSQHKN+A A+ +L +RI +K +Q S A+ RRLL+
Sbjct: 241 TTDSAVRITHIPTGIIVECQEERSQHKNRAKAMSVLQSRIMAAKEEKQASEQAETRRLLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|359786973|ref|ZP_09290046.1| peptide chain release factor 1 [Halomonas sp. GFAJ-1]
gi|359295739|gb|EHK60001.1| peptide chain release factor 1 [Halomonas sp. GFAJ-1]
Length = 362
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F++R +EL LL+ EV NN + + RE++ L +V + Y+++
Sbjct: 1 MKETLRQRLDSFTERFEELAMLLSDPEVINNQQRFRDYSREYAELEELVATWQRYREVEV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A+++ +D EMR A EI+ ++++ ++++E+K+L++PKD +D R +F+E+RAG
Sbjct: 61 SIEEAEQLSRDSDPEMRELAEMEISDGREQLGNLDVELKRLLVPKDPDDGRGVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E+IS S E GGYKE+I+R+ G VY++LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRGWRVEVISASHGEQGGYKEVISRVKGDGVYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE D++ DI+INP+DLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPSDLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+P+G+VV+CQ +RSQHKN+A A+ +L A++K + + Q+ A RR L+
Sbjct: 241 TTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQEQADARRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|386829386|ref|ZP_10116493.1| peptide chain release factor 1 [Beggiatoa alba B18LD]
gi|386430270|gb|EIJ44098.1| peptide chain release factor 1 [Beggiatoa alba B18LD]
Length = 358
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/300 (55%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE S RL EL+ LL + ++ + + +E S + P+V + YKK+
Sbjct: 1 MKPSIQHKLENLSDRLDELNALLADSDTISDQTRFRELSKEFSEIQPVVACFQQYKKVLA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TAKEML D EM+ A DE+N A+ + E++ L+LPKD +D N F+E+RAGTG
Sbjct: 61 DIETAKEMLKDPEMKELAEDELNQAEAEQVRLNDELQILLLPKDPDDTSNTFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E+ W+ EII+ + E GGYKE+I RI G NVYS LKFESG
Sbjct: 121 GDEAAIFAGDLARMYSRYAEKQGWQVEIINENPGEHGGYKEVILRISGQNVYSALKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE QGRIHTSACTVAV+PE EI + INPADL++DTYR+SGAGGQH+NKT
Sbjct: 181 GHRVQRVPETEAQGRIHTSACTVAVMPEVSEINEFQINPADLKVDTYRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L AR+ + +Q + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQEERSQHKNRAKAMSWLQARLLKMERDKQNAEQAATRRSLVGS 300
>gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
Length = 363
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 232/312 (74%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKLE ++R +EL LL + E+ N+ K + + +E++ L P++ + ++++
Sbjct: 1 MKDSIRSKLENLAERQQELAALLAEPEIANDQKQFREFSQEYAQLEPVIGCFRDFEETQN 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ AK +L D E+R A +E+ A++++ ++ E++ L+LP D NDKRNIF+EIRAG
Sbjct: 61 ALNEAKALLKDQDPELRTLAQEEVAEAERKLEQLDQELQTLLLPSDPNDKRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ALF +DLLRMY+R++E+ W+ EIIS S E GG+KE+I RI+G YS+LKFE
Sbjct: 121 IGGDEAALFASDLLRMYLRYAEQRGWRKEIISDSPGEYGGHKEVIIRIVGEGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEA+EI+DI+IN +DLRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDDIDINLSDLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ++RSQHKN+ A+ +L A++K + + + A RR L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQDERSQHKNRVRAMSLLRAKLKSKEETKLAAEEAATRRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|372267998|ref|ZP_09504046.1| peptide chain release factor 1 [Alteromonas sp. S89]
Length = 361
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKL+ +R +E+ LL E+ ++ + RE+S L +V Y YK + +
Sbjct: 1 MKASVQSKLDNLVERHEEVSALLGDAEIISDQDKFRDLSREYSELEEVVGCYGRYKTLLD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EML ND EMR A +E+ A+ ++ +E E++ L+LP+D ND++N+++EIRAG
Sbjct: 61 DMAGAREMLEENDPEMREMAQEELREAEAQLEPLEKELQTLLLPRDPNDRKNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EIIS + E GGYKEII R+ G +VY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKQGWRIEIISENAGEHGGYKEIITRVAGEDVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + I IN ADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEPDERDAIEINKADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIPTGIVV+CQ++RSQHKN+A A+ +L A++ ++ + RR L+
Sbjct: 241 KTDSAVRLTHIPTGIVVECQDERSQHKNRAKAMALLQAKLNSAQESAAAQEISDARRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|345870951|ref|ZP_08822900.1| Peptide chain release factor 1 [Thiorhodococcus drewsii AZ1]
gi|343921105|gb|EGV31829.1| Peptide chain release factor 1 [Thiorhodococcus drewsii AZ1]
Length = 359
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/303 (53%), Positives = 213/303 (70%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE+ S+R E+ LL + E + + RE++ L P++ Y Y DI TA+E
Sbjct: 8 KLERISERFGEVMALLAEAETQTDANRFRDLSREYAQLEPLMNCYERYLAAEGDIATAEE 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML D EM A DEI A R +E E+ L++P D ND+RNIF+E+RAGTGG E+ALF
Sbjct: 68 MLADPEMAELAKDEIASANARRDALEPELHHLLIPADPNDQRNIFLEVRAGTGGAEAALF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+R++E W+ E IS S E+GGYKE+ RI G +VYS+LKFE G HRVQRV
Sbjct: 128 AGDLLRMYMRYAEIQGWRTEQISESPGELGGYKEVAIRIAGTSVYSRLKFEPGAHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGRIHTSACTVAV+PE + I+ I+INP+DLRIDTYR+SGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRIHTSACTVAVLPEVESIDAIDINPSDLRIDTYRSSGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
HIP+GIVV+CQ +RSQHKN+A A+ L A++ + Q S ++ R+L +GS + +
Sbjct: 248 HIPSGIVVECQEERSQHKNRAKAMSHLHAKLLSGARQTQTSEQSESRKLQVGSGDRSERI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|344337620|ref|ZP_08768554.1| Peptide chain release factor 1 [Thiocapsa marina 5811]
gi|343802573|gb|EGV20513.1| Peptide chain release factor 1 [Thiocapsa marina 5811]
Length = 359
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 215/294 (73%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
KLE+ S+R E+ LL + E ++ + + RE++ L P++ YN Y++ D+ A+
Sbjct: 7 GKLERLSERFGEVVALLAESETQSDQNRFRELSREYAQLEPLIAAYNRYREAELDVAAAE 66
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
EML D EM A +E+ A R +E E+ +L++P D +D+RN+F+E+RAGTGG E+AL
Sbjct: 67 EMLADPEMAALAREEMADANDRREQLEPEVYRLLVPPDPDDQRNVFLEVRAGTGGAEAAL 126
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
F DLLRMY+R++E W+ E I S E+GGYKE+I RIIG V+S+LKFE G HRVQR
Sbjct: 127 FAGDLLRMYLRYAELMRWQVEPIGESPGELGGYKEVIVRIIGNGVFSRLKFEPGAHRVQR 186
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
VP+TE+QGR+HTSACTVAV+PEAD I+ I INP++LR+DTYR+SGAGGQH+NKTDSA+RI
Sbjct: 187 VPETESQGRVHTSACTVAVMPEADAIDAIAINPSELRVDTYRSSGAGGQHVNKTDSAIRI 246
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
TH+P+GIVV+CQ +RSQHKN+A A+ +L A++ Q S A+ R+L +GS
Sbjct: 247 THLPSGIVVECQEERSQHKNRAKAMSLLQAKLLAGARETQASEQAQSRKLQVGS 300
>gi|350551845|ref|ZP_08921056.1| Peptide chain release factor 1 [Thiorhodospira sibirica ATCC
700588]
gi|349796062|gb|EGZ49853.1| Peptide chain release factor 1 [Thiorhodospira sibirica ATCC
700588]
Length = 362
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/302 (53%), Positives = 220/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE S+R +EL LL+ E + + E+S L P+V + +Y ++ +
Sbjct: 1 MKDSIRLKLEGISERFEELGRLLSDAETIAQQDRFRRLSMEYSQLEPVVACWQDYHRVTQ 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ M D E+R A +E+ L ++R +EL++++ +LP D +D+ NIFIEIRAG
Sbjct: 61 DLAAAQAMRRDPDPEVRALAEEELGLCEQRHAVLELDLQRHLLPTDPHDQSNIFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY R++E+ W+ E++S S SE GGYKEIIARIIG YS+LKFE
Sbjct: 121 TGGDEAALFAGDLFRMYARYAEQRGWQMEVLSMSESEQGGYKEIIARIIGHGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSA TV ++PE DEIE INPADLRIDTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPQTESQGRIHTSAATVVIMPEPDEIEAPQINPADLRIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSAVR+TH+P+GIVV+CQ++RSQHKNKA A+ +L A++ + + + QQ + R+ L+
Sbjct: 241 RTDSAVRLTHLPSGIVVECQDERSQHKNKARAMSLLAAKLFEVEQKRQQDAQSATRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
gi|386063879|ref|YP_005979183.1| peptide chain release factor 1 [Pseudomonas aeruginosa NCGM2.S1]
gi|421170450|ref|ZP_15628402.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 700888]
gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
gi|348032438|dbj|BAK87798.1| peptide chain release factor 1 [Pseudomonas aeruginosa NCGM2.S1]
gi|404523388|gb|EKA33812.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 700888]
Length = 360
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S R +EL LL EV ++ + RE++ + P++ + +Y+K+
Sbjct: 1 MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D E+R+ A +E+ A+ R+ + +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E +S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
Length = 364
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 226/311 (72%), Gaps = 8/311 (2%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKKINED 61
++ KL+ R +E+ LL +V N +D K E+S L +V + Y++ E
Sbjct: 6 IIEKLQGLVDRHEEISALLGDPDVIGDQNKFRDLSK---EYSQLEEVVNTFQRYEEAEES 62
Query: 62 IITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
+ A+EML D +MR A +E+ AK +I +E+E++KL+LP+D ND +N F+EIRAGT
Sbjct: 63 LKAAEEMLKDEDPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGT 122
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDE+A+F DL RMY +++E+ W+ E+IS+S E GGYKEII RI G +VYS LKFES
Sbjct: 123 GGDEAAIFAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFES 182
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVP+TE+QGRIHTSACTVAV+PEADE++ I INPADL+IDT+RASGAGGQH+NK
Sbjct: 183 GAHRVQRVPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNK 242
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L AR+ ++ + QS +MRR L+G
Sbjct: 243 TDSAIRITHLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAKAQSEQTEMRRNLVG 302
Query: 300 SVQKKSPLNIF 310
+ + + +
Sbjct: 303 TGDRSDRIRTY 313
>gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2]
gi|418588031|ref|ZP_13152048.1| peptide chain release factor 1 [Pseudomonas aeruginosa MPAO1/P1]
gi|418590126|ref|ZP_13154041.1| peptide chain release factor 1 [Pseudomonas aeruginosa MPAO1/P2]
gi|421156091|ref|ZP_15615545.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 14886]
gi|421519223|ref|ZP_15965895.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO579]
gi|451985069|ref|ZP_21933300.1| Peptide chain release factor 1 [Pseudomonas aeruginosa 18A]
gi|12231016|sp|P42806.2|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
gi|375041171|gb|EHS33884.1| peptide chain release factor 1 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051077|gb|EHS43550.1| peptide chain release factor 1 [Pseudomonas aeruginosa MPAO1/P2]
gi|404346208|gb|EJZ72559.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO579]
gi|404519470|gb|EKA30222.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 14886]
gi|451757243|emb|CCQ85823.1| Peptide chain release factor 1 [Pseudomonas aeruginosa 18A]
Length = 360
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S R +EL LL EV ++ + RE++ + P++ + +Y+K+
Sbjct: 1 MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D E+R+ A +E+ A+ R+ + +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E +S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1]
gi|355652207|ref|ZP_09056642.1| peptide chain release factor 1 [Pseudomonas sp. 2_1_26]
gi|386060822|ref|YP_005977344.1| peptide chain release factor 1 [Pseudomonas aeruginosa M18]
gi|392986334|ref|YP_006484921.1| peptide chain release factor 1 [Pseudomonas aeruginosa DK2]
gi|416855507|ref|ZP_11911538.1| peptide chain release factor 1 [Pseudomonas aeruginosa 138244]
gi|416874246|ref|ZP_11918015.1| peptide chain release factor 1 [Pseudomonas aeruginosa 152504]
gi|419754587|ref|ZP_14280947.1| peptide chain release factor 1 [Pseudomonas aeruginosa PADK2_CF510]
gi|420141853|ref|ZP_14649492.1| peptide chain release factor 1 [Pseudomonas aeruginosa CIG1]
gi|421163224|ref|ZP_15621951.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 25324]
gi|421176918|ref|ZP_15634576.1| peptide chain release factor 1 [Pseudomonas aeruginosa CI27]
gi|421182727|ref|ZP_15640199.1| peptide chain release factor 1 [Pseudomonas aeruginosa E2]
gi|424944558|ref|ZP_18360321.1| peptide chain release factor 1 [Pseudomonas aeruginosa NCMG1179]
gi|122257179|sp|Q02G09.1|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739119|sp|B7V0L1.1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
gi|334842864|gb|EGM21463.1| peptide chain release factor 1 [Pseudomonas aeruginosa 138244]
gi|334843650|gb|EGM22236.1| peptide chain release factor 1 [Pseudomonas aeruginosa 152504]
gi|346061004|dbj|GAA20887.1| peptide chain release factor 1 [Pseudomonas aeruginosa NCMG1179]
gi|347307128|gb|AEO77242.1| peptide chain release factor 1 [Pseudomonas aeruginosa M18]
gi|354824415|gb|EHF08666.1| peptide chain release factor 1 [Pseudomonas sp. 2_1_26]
gi|384399000|gb|EIE45403.1| peptide chain release factor 1 [Pseudomonas aeruginosa PADK2_CF510]
gi|392321839|gb|AFM67219.1| peptide chain release factor 1 [Pseudomonas aeruginosa DK2]
gi|403245410|gb|EJY59227.1| peptide chain release factor 1 [Pseudomonas aeruginosa CIG1]
gi|404529472|gb|EKA39508.1| peptide chain release factor 1 [Pseudomonas aeruginosa ATCC 25324]
gi|404530288|gb|EKA40295.1| peptide chain release factor 1 [Pseudomonas aeruginosa CI27]
gi|404541473|gb|EKA50830.1| peptide chain release factor 1 [Pseudomonas aeruginosa E2]
gi|453042715|gb|EME90454.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA21_ST175]
Length = 360
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S R +EL LL EV ++ + RE++ + P++ + +Y+K+
Sbjct: 1 MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D E+R+ A +E+ A+ R+ + +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E +S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|354724247|ref|ZP_09038462.1| peptide chain release factor 1 [Enterobacter mori LMG 25706]
Length = 360
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSANEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|334124406|ref|ZP_08498415.1| peptide chain release factor RF1 [Enterobacter hormaechei ATCC
49162]
gi|333389405|gb|EGK60571.1| peptide chain release factor RF1 [Enterobacter hormaechei ATCC
49162]
Length = 360
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2]
gi|119361633|sp|Q31IN8.1|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira
crunogena XCL-2]
Length = 363
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKLE +RL E++ L++ E+ NN + +EHS L P+VE +N + +
Sbjct: 1 MKESIRSKLENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ AK+M+ D +++ +E+ +K+ +E E++K++LPKD ND NIF+EIRAG
Sbjct: 61 DLQEAKDMIKSGDPDLKEMGQEELPELEKQQATLEAELQKMLLPKDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E+I+ E GGYKEIIARIIG YS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TETQGR+HTSA TV ++PEA ++E I++NPADL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG VV+CQ++RSQHKN+A A+ +L +RI D + R A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGTVVECQDERSQHKNRARAMSLLASRIMDERQRIHDQEIAQERKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|419956812|ref|ZP_14472878.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
GS1]
gi|388606970|gb|EIM36174.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
GS1]
Length = 360
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
E2348/69]
gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
gi|417755208|ref|ZP_12403297.1| peptide chain release factor 1 [Escherichia coli DEC2B]
gi|418996325|ref|ZP_13543930.1| peptide chain release factor 1 [Escherichia coli DEC1A]
gi|419001558|ref|ZP_13549104.1| peptide chain release factor 1 [Escherichia coli DEC1B]
gi|419007039|ref|ZP_13554489.1| peptide chain release factor 1 [Escherichia coli DEC1C]
gi|419012997|ref|ZP_13560357.1| peptide chain release factor 1 [Escherichia coli DEC1D]
gi|419028294|ref|ZP_13575482.1| peptide chain release factor 1 [Escherichia coli DEC2C]
gi|419034149|ref|ZP_13581243.1| peptide chain release factor 1 [Escherichia coli DEC2D]
gi|419039095|ref|ZP_13586145.1| peptide chain release factor 1 [Escherichia coli DEC2E]
gi|425299750|ref|ZP_18689741.1| peptide chain release factor 1 [Escherichia coli 07798]
gi|254790880|sp|B7UQ99.1|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
E2348/69]
gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
gi|377846926|gb|EHU11931.1| peptide chain release factor 1 [Escherichia coli DEC1A]
gi|377848662|gb|EHU13643.1| peptide chain release factor 1 [Escherichia coli DEC1C]
gi|377851813|gb|EHU16749.1| peptide chain release factor 1 [Escherichia coli DEC1B]
gi|377860629|gb|EHU25453.1| peptide chain release factor 1 [Escherichia coli DEC1D]
gi|377877161|gb|EHU41758.1| peptide chain release factor 1 [Escherichia coli DEC2B]
gi|377882394|gb|EHU46939.1| peptide chain release factor 1 [Escherichia coli DEC2D]
gi|377883158|gb|EHU47687.1| peptide chain release factor 1 [Escherichia coli DEC2C]
gi|377896571|gb|EHU60966.1| peptide chain release factor 1 [Escherichia coli DEC2E]
gi|408219356|gb|EKI43506.1| peptide chain release factor 1 [Escherichia coli 07798]
Length = 360
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E ++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|424924881|ref|ZP_18348242.1| peptide chain release factor 1 [Pseudomonas fluorescens R124]
gi|404306041|gb|EJZ60003.1| peptide chain release factor 1 [Pseudomonas fluorescens R124]
Length = 360
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ + P+V Y +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQARFRAYSKEYAEVEPVVAAYKKLLGVQN 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+ +L +D +MR A++E+ AK+ + +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLESAQALLKDSDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|401764069|ref|YP_006579076.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400175603|gb|AFP70452.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 360
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANDGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
Length = 358
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 166/304 (54%), Positives = 219/304 (72%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
SKL S+RL+E+D +L E ++ + RE + PIV + Y++ D+ A+
Sbjct: 8 SKLSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAESDLAAAQ 67
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
E+ D EM+ FA +E A + IE E++ +LPKD ND RNIF+EIRAGTGGDESAL
Sbjct: 68 ELAADPEMKAFAAEESAAATHELERIEQELRIALLPKDPNDDRNIFLEIRAGTGGDESAL 127
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
F DLLRMY+R++E + W+ EI+S++ SE+GGYKE+I RIIG YSKLKFESG HRVQR
Sbjct: 128 FAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFESGGHRVQR 187
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
VP TE+QGRIHTSACTVAV+PE DEIE++ +NPADLRID +RASGAGGQHI KTDSAVRI
Sbjct: 188 VPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQKTDSAVRI 247
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSP 306
TH+PTG+VV+CQ++RSQ +NKA A+ +L +R+ ++ EQ A R+ LIGS +
Sbjct: 248 THLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQHEREASERKNLIGSGDRSER 307
Query: 307 LNIF 310
+ +
Sbjct: 308 IRTY 311
>gi|338997725|ref|ZP_08636417.1| peptide chain release factor 1 [Halomonas sp. TD01]
gi|338765354|gb|EGP20294.1| peptide chain release factor 1 [Halomonas sp. TD01]
Length = 362
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+ F+ R +EL LL+ EV NN + + RE++ L +V + Y ++ +
Sbjct: 1 MKETLRQRLDSFADRFEELAMLLSDPEVINNQQRFRDYSREYAELEELVAAWQRYGEVEK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A ++ +D EMR A EIN ++++ +++E+K+L++PKD +D R +F+E+RAG
Sbjct: 61 SIEEAVQLSRDSDPEMRELAEMEINDGREQLEALDIELKRLLVPKDPDDGRGVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S S E GGYKE+I+R+ G VY++LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEVISRVKGDGVYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE +++ DI+INP+DLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEVEDVGDIDINPSDLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ +L A++K + + Q+ A RR L+
Sbjct: 241 TTDSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQEQADARRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
gi|421856391|ref|ZP_16288757.1| peptide chain release factor 1 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
gi|403188089|dbj|GAB74958.1| peptide chain release factor 1 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 362
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + K REHS L I E++ Y++
Sbjct: 1 MKESLRLRLDQLSDRYEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A +EI + I +E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEAMLSDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKEII R+ G VY ++KFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K Q+S T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQESATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
gi|387867437|ref|YP_005698906.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +EI A+ R+ D+E ++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEEIKAARGRLADLEQHLQILLLPKDPDDERDCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA++ G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+P E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEVASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRVRTY 310
>gi|398974412|ref|ZP_10685039.1| peptide chain release factor 1 [Pseudomonas sp. GM25]
gi|398141614|gb|EJM30530.1| peptide chain release factor 1 [Pseudomonas sp. GM25]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ L P+V+ Y +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+ + +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IARI G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLAAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|449473633|ref|XP_004153936.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAELRRWRVEIMSANEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
gi|166977363|sp|A4WBC6.1|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
638]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAEASTRRNLLGS 300
>gi|429212753|ref|ZP_19203918.1| peptide chain release factor 1 [Pseudomonas sp. M1]
gi|428157235|gb|EKX03783.1| peptide chain release factor 1 [Pseudomonas sp. M1]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV ++ + RE + + P++ + +++K
Sbjct: 1 MKASLLTKLDTLSDRYEELTALLGDAEVISDQTKFRAYSREFAEVEPVILAFRDFRKTQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ AK + ++E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAEEEVASAKACLAELEDALQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVEVLSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
35316]
gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
35316]
Length = 360
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + Y +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCYTDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|421463881|ref|ZP_15912574.1| peptide chain release factor 1 [Acinetobacter radioresistens
WC-A-157]
gi|400206255|gb|EJO37232.1| peptide chain release factor 1 [Acinetobacter radioresistens
WC-A-157]
Length = 362
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + K REHS L I E++ Y++
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A +EI + I +E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEAMLSDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKEII R+ G VY ++KFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K Q+S T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQESATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
gi|166223563|sp|A1WVQ8.1|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
halophila SL1]
Length = 363
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE+ ++R +E+ L +V + + + RE++ L P+V+ N Y+ +
Sbjct: 1 MKATIRNKLERMAERHEEIGAQLADPDVVGDPSKFAELSREYARLEPVVQDLNAYRAEAD 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +A+ MLND E+R A E+ A++R+ ++E +++ ++P D ND+RNIF+E+RAG
Sbjct: 61 TVASAEAMLNDGDAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ALF DLLRMY+R++ER WK EI+S E GGY+E+IAR+ G +VY++LKFE
Sbjct: 121 AGGDEAALFAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DE+ I +N ADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+P+G+VV+CQ++RSQ+KN+A A+ +L AR+ + + +QQS ++ RRL +
Sbjct: 241 TTDSAIRITHLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSERSEQRRLAV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|385793515|ref|YP_005826491.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
Length = 361
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 225/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D TA EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQTAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|401674994|ref|ZP_10806989.1| peptide chain release factor 1 [Enterobacter sp. SST3]
gi|400217759|gb|EJO48650.1| peptide chain release factor 1 [Enterobacter sp. SST3]
Length = 360
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|345299600|ref|YP_004828958.1| peptide chain release factor 1 [Enterobacter asburiae LF7a]
gi|345093537|gb|AEN65173.1| Peptide chain release factor 1 [Enterobacter asburiae LF7a]
Length = 360
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQEAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|398969075|ref|ZP_10682688.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
gi|398142769|gb|EJM31660.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
Length = 360
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ L P+V+ Y +
Sbjct: 1 MKASLLNKLDTLQDRFEELTALLGDGEVISDQAKFRAYSKEYAELEPVVQGYKKLLGVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+ + +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKELLIRLEDDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IARI G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
gi|61214614|sp|Q6F9S2.2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 362
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 224/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L IV++++ Y++ E
Sbjct: 1 MKESLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + ++ A +EI + I +E ++ L++PKD ND ++E+RAGTG
Sbjct: 61 DIETAESMLSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ +RSQHKNKA A+ +L++R++++K Q++ T++MRR L+GS
Sbjct: 241 DSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|350563206|ref|ZP_08932028.1| peptide chain release factor 1 [Thioalkalimicrobium aerophilum AL3]
gi|349779070|gb|EGZ33417.1| peptide chain release factor 1 [Thioalkalimicrobium aerophilum AL3]
Length = 362
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ +RL+E+ LL+ +V NN ++ +EH+ L P+V Y Y
Sbjct: 1 MKDSIQRKLQALVERLEEVGALLSDPQVVNNQTEFRNLSKEHAQLEPVVSSYKAYLSAEA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M+ D +++ A +E ++++ +E+ ++K++LP+D ND NIF+EIRAG
Sbjct: 61 DLQEARDMIASGDRDLKEMAQEEYPALEQQLETLEIALQKMLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL +MY R++E W+ EII+ S E GGYKEIIARIIG YSKLKFE
Sbjct: 121 TGGDEAAIFAGDLFKMYARYAETQRWQIEIINTSDGEHGGYKEIIARIIGDGAYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TETQGR+HTSA TVA++PEA ++E + +NPADL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATETQGRVHTSAATVAIMPEAADVEQVELNPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG +V+CQ++RSQHKN+A A+ +L ARI D+K + A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGTIVECQDERSQHKNRARAMSLLAARIMDAKRQAHNQEIAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392979476|ref|YP_006478064.1| peptide chain release factor 1 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392325409|gb|AFM60362.1| peptide chain release factor 1 [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 360
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
Length = 361
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + +++ + RE++ L I + +++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDPSIISDMDRFRMLSREYAQLTDITRCFQRWQQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EMR A DE+ A++ +E ++K L+LP+D +D+R F+EIRAGTG
Sbjct: 61 DIATAEMLLDDPEMREMAQDELKEAREAGDTLEQQLKVLLLPRDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E++S S E GGYKE+IA++IG Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|452747687|ref|ZP_21947480.1| peptide chain release factor 1 [Pseudomonas stutzeri NF13]
gi|452008431|gb|EME00671.1| peptide chain release factor 1 [Pseudomonas stutzeri NF13]
Length = 360
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVTEAKTQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPA+LR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGMVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707]
gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
gi|119361569|sp|Q3JDR4.1|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus
oceani ATCC 19707]
gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKLE ++R +EL LL + E+ + K + + +E++ L P++ + ++++
Sbjct: 1 MKDSIRSKLETLAERQQELTALLAEPEIASAQKKFRELSQEYAQLEPVIGCFRDFEQAQS 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +K +L D E+R A +EI A+K++ ++ E+ L+LP D NDKRNIF+EIRAG
Sbjct: 61 VLNESKALLQDQDPELRVLAQEEIAAAEKKLERLDRELHTLLLPSDPNDKRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF +DLLRMY+R++E+ W+ EI+ S E GG+KEII RI+G YS+LKFE
Sbjct: 121 TGGDEAALFASDLLRMYLRYAEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEA+EI+DI+INPADLR+DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDDIDINPADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+ +GIVV+CQ++RSQHKN+A A+ +L ++K + + + RR LI
Sbjct: 241 KTDSAIRITHLASGIVVECQDERSQHKNRARAMSLLRTKLKSEEEAKLVAEETATRRSLI 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|397688049|ref|YP_006525368.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 10701]
gi|395809605|gb|AFN79010.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 10701]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P+++ Y ++ K+
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIDAYRDFLKLQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ A+ ++ +IE +++++LPKD D RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDVREMAEEEVEQARGQLEEIETRLQRMLLPKDPKDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+I+R+ G NV++KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVEILSENPGEHGGYKEVISRVEGDNVFAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLRIDTYRASGAGGQHIN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRIDTYRASGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITH+P+GIVV+CQ +RSQHKN+A A+ L A+++D + + R+LL+
Sbjct: 241 KTDSAVRITHLPSGIVVECQEERSQHKNRARAMAWLAAKLQDVQDSAAHKEISDTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|388547180|ref|ZP_10150448.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
gi|388274755|gb|EIK94349.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL E+ ++ + RE++ L P+V Y + K+
Sbjct: 1 MKASLLNKLDTIQDRFEELTALLGDGEIISDQTRFRAFSREYAELEPVVAGYQEWCKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKEQLVVLEGNLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IAR+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDERVAIEINPADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHLPTGTVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|397165406|ref|ZP_10488857.1| peptide chain release factor 1 [Enterobacter radicincitans DSM
16656]
gi|396093063|gb|EJI90622.1| peptide chain release factor 1 [Enterobacter radicincitans DSM
16656]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++K+ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQKVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E ++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKSEQLEQHLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
Length = 364
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/315 (51%), Positives = 228/315 (72%), Gaps = 6/315 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +E+ +L++ E N+ K + + EHS L +V+++ Y++ E
Sbjct: 1 MKESLRFRLDQMSDRFEEVTAMLSEPETMNDNKKFRELSVEHSDLSALVDVWGKYRQAEE 60
Query: 61 DIITAKEMLNDL----EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
D+ TA+EML+D +M+ A +EI AK I ++E + ++LPKD NDK F+EIR
Sbjct: 61 DLATAEEMLSDATGDGDMKEMAQEEIQAAKDTINELEDVLNVMMLPKDPNDKVPAFLEIR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLK 176
AGTGGDE+A+F DL RMY R++ W+ E++S + E GGYKEII+R+ G VY +LK
Sbjct: 121 AGTGGDEAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEIISRVSGTGVYGRLK 180
Query: 177 FESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIED-ININPADLRIDTYRASGAGGQ 235
FESG HRVQRVP+TE+QGR+HTSACTVAV+PE EI+D ++INPADLRIDTYRASGAGGQ
Sbjct: 181 FESGAHRVQRVPETESQGRVHTSACTVAVMPEV-EIDDTVDINPADLRIDTYRASGAGGQ 239
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
HINKTDSAVRITHIPTG VV+CQ +RSQH N+ A+K+L+++I+ K+++Q ++ MRR
Sbjct: 240 HINKTDSAVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKVQKQIDASSDMRR 299
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 300 NLVGSGDRSERIRTY 314
>gi|334143701|ref|YP_004536857.1| peptide chain release factor 1 [Thioalkalimicrobium cyclicum ALM1]
gi|333964612|gb|AEG31378.1| Peptide chain release factor 1 [Thioalkalimicrobium cyclicum ALM1]
Length = 362
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ +RL+E+ LL+ +V NN ++ +EH+ L P+V Y Y
Sbjct: 1 MKDSIQRKLQALVERLEEVGVLLSDPQVVNNQTEFRNLSKEHAQLEPVVTSYQAYLHAES 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M+ D E++ A +E ++++ +E+ ++K++LP+D ND NIF+EIRAG
Sbjct: 61 DLQEARDMIASGDRELKEMAQEEYPALEQQLETLEIALQKMLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL +MY R++E W+ EII+ S E GGYKEIIARIIG YSKLKFE
Sbjct: 121 TGGDEAAIFAGDLFKMYARYAETQRWQIEIINTSDGEHGGYKEIIARIIGDGAYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TETQGR+HTSA T+A++PEA ++E + +NPADL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATETQGRVHTSAATIAIMPEAADVEQVELNPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG +V+CQ++RSQHKN+A A+ +L ARI D+K + A+ R+ L+
Sbjct: 241 KTDSAIRITHLPTGTIVECQDERSQHKNRARAMSLLAARIMDAKRQAHNQEIAQTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|374702493|ref|ZP_09709363.1| peptide chain release factor 1 [Pseudomonas sp. S9]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV +N + + +E++ + P+ + Y+K+
Sbjct: 1 MKPSLLNKLDLMQDRFEELTALLGDAEVISNQQQFRAYSKEYAEIEPVNATFGEYRKVLA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+ +L +D +MR A +E+ AK+++ +E ++++++LPKD ND RN+F+E+RAG
Sbjct: 61 DLESAQALLKDSDPDMREMAEEEVAEAKEQLLKLEADLQRMLLPKDPNDDRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S S E GGYKE+IARI G NVYSKLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSASEGEHGGYKEVIARIEGDNVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE DE +ININPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAEININPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++KD + + R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLGAKLKDQQDAAAHKEISDTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1]
gi|119361582|sp|Q3K6W9.1|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1]
Length = 360
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + +E++ L P+V+ Y +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+ + +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IARI G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
Length = 376
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 224/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L IV++++ Y++ E
Sbjct: 15 MKESLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEE 74
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + ++ A +EI + I +E ++ L++PKD ND ++E+RAGTG
Sbjct: 75 DIETAESMLSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTG 134
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 135 GDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESG 194
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 195 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 254
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ +RSQHKNKA A+ +L++R++++K Q++ T++MRR L+GS
Sbjct: 255 DSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRDLVGS 314
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 315 GDRSERIRTY 324
>gi|365970932|ref|YP_004952493.1| peptide chain release factor 1 [Enterobacter cloacae EcWSU1]
gi|365749845|gb|AEW74072.1| Peptide chain release factor 1 [Enterobacter cloacae EcWSU1]
Length = 360
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELLDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSANDGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|423120771|ref|ZP_17108455.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5246]
gi|376395401|gb|EHT08047.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5246]
Length = 360
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y ++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAATIADQDRFRALSREYAQLSDVARCYTEWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK + ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDAEMREMAQEELRDAKAKSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIAKRQQAEASTRRNLLGS 300
>gi|357406696|ref|YP_004918620.1| peptide chain release factor 1 [Methylomicrobium alcaliphilum 20Z]
gi|351719361|emb|CCE25037.1| Peptide chain release factor 1 (RF-1) [Methylomicrobium
alcaliphilum 20Z]
Length = 361
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 221/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL S+R E+ LL + EV N + +E++ + PIV Y Y E
Sbjct: 1 MKPSIEHKLANLSERFDEITALLAEPEVQANQNKFRSLSQEYAQINPIVTCYKRYLDTAE 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+EM D L++R A +EI A+K+ IE E++ L+LP+D ND RNIF+EIRAG
Sbjct: 61 NLAGAQEMAKDPDLDLREMAREEILAAEKQQEVIEQELQILLLPRDPNDNRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ WK EII+ + E GGYKEII R+ G +VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLARMYQRYAEKKGWKTEIINENEGEHGGYKEIILRVTGQDVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE +E++ I+INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEVEEVDAIDINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L +R+ ++ + Q+ R+L +
Sbjct: 241 KTDSAIRITHLPSGIVVECQDERSQHKNRARAMSLLQSRLLSAEQEKHQAEQQANRKLQV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|421617613|ref|ZP_16058600.1| peptide chain release factor 1 [Pseudomonas stutzeri KOS6]
gi|409780393|gb|EKN60024.1| peptide chain release factor 1 [Pseudomonas stutzeri KOS6]
Length = 360
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ K ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVAEGKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPA+LRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|399519470|ref|ZP_10760265.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112566|emb|CCH36823.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 360
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV + + +E++ + P++ + +K+
Sbjct: 1 MKASLLNKLDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK+ + +E ++++++LPKD ND RN+++EIRAG
Sbjct: 61 DLEGAQALLKDSDADMREMAEEEVAQAKEALVTLEDKLQRMLLPKDPNDGRNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S + E GG+KE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
Length = 360
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S R +EL LL EV ++ + RE++ + P++ + +Y+K+
Sbjct: 1 MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D E+R+ A +E+ A+ R+ + +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
T GDE+A+F DL RMY R++ER W+ E +S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TCGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITHIP+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
Length = 361
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|387825191|ref|YP_005824662.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
Length = 361
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|333985482|ref|YP_004514692.1| peptide chain release factor 1 [Methylomonas methanica MC09]
gi|333809523|gb|AEG02193.1| Peptide chain release factor 1 [Methylomonas methanica MC09]
Length = 361
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+Q EV NN + +E++ + P+V Y Y
Sbjct: 1 MKPSIQTKLENLGERFEEITALLSQPEVQNNQNQFRSLSQEYAQIEPLVGCYKTYLDNEA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ A+EM +D E+R A DEI A+ + +E E++ L+LPKD ND RN+F+E+RAG
Sbjct: 61 HLEAAQEMAKDSDPELREMAKDEIAEAESKREALEQELQILLLPKDPNDNRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W EII+ + E GGYKE+I R+ G NVYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLARMYQRYAERQGWSTEIINENRGEHGGYKEVILRVSGQNVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE D +++I+INPADLRIDTYRASGAGGQH+N
Sbjct: 181 SGTHRVQRVPETESQGRVHTSACTVAIMPEVDAVDEIDINPADLRIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITHIP+G+VV+CQ++RSQHKN+A A+ +L AR+ + +Q + ++ RRL +
Sbjct: 241 RTDSAIRITHIPSGVVVECQDERSQHKNRARAMSVLQARLLSAAQEKQHAEQSENRRLQV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398985057|ref|ZP_10690884.1| peptide chain release factor 1 [Pseudomonas sp. GM24]
gi|399013284|ref|ZP_10715594.1| peptide chain release factor 1 [Pseudomonas sp. GM16]
gi|398114223|gb|EJM04055.1| peptide chain release factor 1 [Pseudomonas sp. GM16]
gi|398154660|gb|EJM43126.1| peptide chain release factor 1 [Pseudomonas sp. GM24]
Length = 360
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV + + +E++ L P+V+ Y +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVIADQTKFRAYSKEYAELEPVVQTYKKLLSVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A++E+ AK+ + +E ++++++LPKD ND RN+++EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAVEEVREAKELLIALEGDLQRMLLPKDPNDGRNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IARI G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSANEGEHGGYKEVIARIEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|398854310|ref|ZP_10610880.1| peptide chain release factor 1 [Pseudomonas sp. GM80]
gi|398236402|gb|EJN22187.1| peptide chain release factor 1 [Pseudomonas sp. GM80]
Length = 360
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ R +EL LL EV + + +E++ + P+V+ Y +
Sbjct: 1 MKASLHNKLDILQDRFEELTALLGDGEVIADQSKFRAYSKEYAEIEPVVQGYKKLLSVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+ +L ND +MR A++E+ AK+ + +E ++++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLESAQALLKDNDPDMREMAVEEVREAKESLITLEADLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI+S + E GGYKE+IARI G NVY KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE E I INPADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++ D + + A R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|437999769|ref|YP_007183502.1| peptide chain release factor 1 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429339003|gb|AFZ83425.1| peptide chain release factor 1 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 344
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 219/294 (74%), Gaps = 2/294 (0%)
Query: 18 ELDFLLTQKEVHNNIKDYCKKVR-EHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRN 76
E+D LL +V ++I DY +K+ E S + P+V L+N++ + D+ A EM++D E++
Sbjct: 2 EIDILLADHDVTSDI-DYLRKLSCERSEIEPVVTLFNSFLQYESDLKAANEMMSDPELKE 60
Query: 77 FALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYI 136
A +EI +A+ I +E +++ +LPKD ND R F+EIRAG GGDESALF DLLRMYI
Sbjct: 61 MAEEEIKIARSCIEKLENDLQVSLLPKDTNDDRGFFVEIRAGAGGDESALFSADLLRMYI 120
Query: 137 RFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRI 196
R++ER W EIIS + S++GGYKE+I RI G Y +LKFESG HRVQR+P+TE QGRI
Sbjct: 121 RYAERMGWFVEIISANSSDLGGYKEVIIRIEGNGAYGRLKFESGGHRVQRIPETENQGRI 180
Query: 197 HTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQ 256
HTSACTVAV+ EADE+ +I I+ D+R+DT+RASGAGGQHINKTDSAVRITH+P+G+VV+
Sbjct: 181 HTSACTVAVMLEADEVNEITIDAVDIRVDTFRASGAGGQHINKTDSAVRITHLPSGLVVE 240
Query: 257 CQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
CQ+DRSQH+NK A+K+L AR+KD ++REQQ A R+ LIGS + + +
Sbjct: 241 CQDDRSQHRNKEKAMKVLSARLKDLEIREQQKKEASERKSLIGSGDRSERIRTY 294
>gi|404494363|ref|YP_006718469.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
gi|119361572|sp|Q3A129.1|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77546366|gb|ABA89928.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
Length = 356
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 161/299 (53%), Positives = 221/299 (73%), Gaps = 3/299 (1%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ +KLE+ R +E++ LL+ +V + K + + REH+ L +V +Y YK+++EDI
Sbjct: 1 MIFNKLEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIE 60
Query: 64 TAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
+E+L +D EMR A E+ + ++ ++K L+LPKD ND +N+ +EIRAGTGG
Sbjct: 61 GNRELLQDSDPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ALF DL RMY RF+E WK E +S S SE GG+KEIIA I G VYS+LK+ESG
Sbjct: 121 DEAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESGT 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE QGRIHTSACTVAV+PEA+++ D++I+P DLRID YRASGAGGQH+NKT+
Sbjct: 181 HRVQRVPETEAQGRIHTSACTVAVLPEAEDV-DVDIDPTDLRIDVYRASGAGGQHVNKTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SAVRITH+PTG+VV CQ+++SQHKNKA A+K+L +RI D + +QQ+ A R+ +GS
Sbjct: 240 SAVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQQAQMAADRKSQVGS 298
>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
gi|395229702|ref|ZP_10408013.1| peptide chain release factor 1 [Citrobacter sp. A1]
gi|421847446|ref|ZP_16280584.1| peptide chain release factor 1 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424729808|ref|ZP_18158408.1| glutamyl-trna reductase [Citrobacter sp. L17]
gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
gi|394716917|gb|EJF22647.1| peptide chain release factor 1 [Citrobacter sp. A1]
gi|411771242|gb|EKS54949.1| peptide chain release factor 1 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422895763|gb|EKU35550.1| glutamyl-trna reductase [Citrobacter sp. L17]
gi|455645768|gb|EMF24811.1| peptide chain release factor 1 [Citrobacter freundii GTC 09479]
Length = 360
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E ++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGS 300
>gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1]
gi|166223569|sp|A2SD46.1|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium
petroleiphilum PM1]
Length = 359
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L+++ +RL ELD LL V + + REH + IVE + +
Sbjct: 1 MKPALRLQLDRYVRRLAELDSLLADPAVMRDAGGFRALSREHVEVSGIVERQRRHAQRER 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A EM +D E+ A +E A+ + + E+++L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DLAAAAEMASDPELAAMAAEEAASAQAELDRLATELQRLLLPRDPDDARSVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ E++S S SE+GGYKE++ARI G V+ LK+ESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAVFGHLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE +++ +NPADLRIDTYRASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+V +CQ+DRSQH+NKA A+ +L AR++D E+Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQAREAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|407697445|ref|YP_006822233.1| peptide chain release factor 1 [Alcanivorax dieselolei B5]
gi|407254783|gb|AFT71890.1| Peptide chain release factor 1 [Alcanivorax dieselolei B5]
Length = 365
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLEK ++R +EL LL+ +V K + +E++ L P+V+ + Y+ E
Sbjct: 1 MKASLSAKLEKLTERFEELSGLLSDPDVIAEQKRFRAYSKEYAELEPVVQGFREYRTTQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ TA+ + +D EMR +E+ A+ R+ +E ++++ +LPKD D +++EIRAG
Sbjct: 61 NLETARALTEDSDPEMRAMGQEEVREAQARLEQLESDLQRAMLPKDPRDNAGVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY R++++ WK E +S S E GGYKE+IAR++G VYS+LKFE
Sbjct: 121 TGGDEAALFAGDLFRMYSRYADQRGWKVETVSASEGEHGGYKEVIARVMGDGVYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+ EA+E DI I DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMAEAEEAGDIEIRNEDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV+CQ++RSQHKNKA A+ +L AR+ D++ Q+ A R+ L+
Sbjct: 241 TTDSAVRITHLPTGVVVECQDERSQHKNKAKAMSLLKARLLDARESASQAEQAAQRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|344345147|ref|ZP_08776003.1| Peptide chain release factor 1 [Marichromatium purpuratum 984]
gi|343803238|gb|EGV21148.1| Peptide chain release factor 1 [Marichromatium purpuratum 984]
Length = 360
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 207/293 (70%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE+ S R EL LL E + + RE++ L P++ Y Y + +DI TA+E
Sbjct: 8 KLERISDRFDELMALLADAETQADPNRFRDLSREYAQLDPLMACYRRYLEAEDDIATARE 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML D EM A +E+ A+ R +E E+ L++P D ND+ N F+E+RAGTGG E+ALF
Sbjct: 68 MLADTEMAALAREELAEAESRCTALEPELIALLIPPDPNDRCNAFLEVRAGTGGAEAALF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL+RMY+R++E W+ E IS S E+GGYKE++ RI G V+S+LKFE G HRVQRV
Sbjct: 128 AGDLMRMYMRYAELLGWRVEPISESAGELGGYKEVVLRISGSGVFSRLKFEPGAHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGR+HTSACTVAV+PE + I+ I IN ADLRIDTYRASGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRVHTSACTVAVLPEVEAIDSIEINSADLRIDTYRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+P+GIVV+CQ +RSQHKN+A A+ +L AR+ Q S ++ RRL +GS
Sbjct: 248 HLPSGIVVECQEERSQHKNRARAMSLLQARLLAEAQASQTSEQSESRRLQVGS 300
>gi|335041999|ref|ZP_08535026.1| protein chain release factor A [Methylophaga aminisulfidivorans MP]
gi|333788613|gb|EGL54495.1| protein chain release factor A [Methylophaga aminisulfidivorans MP]
Length = 362
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE R +E+ LL + + + +E++ L P+V +N Y++
Sbjct: 1 MKDSIKHKLESLVDRHEEISGLLADPDTMADQNKFRSLSQEYAQLEPVVSNFNAYRRTIS 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ AK+MLN D +MR A +EIN A+++I ++EL ++KL+LPKD ND+RNI++EIRAG
Sbjct: 61 ALEDAKQMLNEDDADMREMAKEEINAAEEKIEELELTLQKLLLPKDPNDQRNIYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++E WK E+I+ E GGYKE+I RI+G YS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYTKYAESRRWKVEVINAQEGEHGGYKEVICRIVGEGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEADEI++++INPADL++DTYR+ GAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEADEIDEVDINPADLKVDTYRSQGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITHIPTGIVV+CQ +RSQHKN+A A+ +L ARI +++ +Q + A+ R+ L+
Sbjct: 241 TTDSAVRITHIPTGIVVECQEERSQHKNRAKAMSVLQARIMAAQVEKQAAEEAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|404495237|ref|YP_006719343.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
gi|418065704|ref|ZP_12703075.1| peptide chain release factor 1 [Geobacter metallireducens RCH3]
gi|119361544|sp|Q39YQ1.1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78192856|gb|ABB30623.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
gi|373561784|gb|EHP88010.1| peptide chain release factor 1 [Geobacter metallireducens RCH3]
Length = 355
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 222/306 (72%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+E+ R +EL+ LL V N ++ K REH+ L +VE Y YKK+ +I
Sbjct: 1 MFDKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEG 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D EM+ A E+ +++ ++E EIK L+LPKD ND RN+ +EIRAGTGGDES
Sbjct: 61 NRELLADPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY RF+ERN WK E++S S SE GG+KE++A I G V++KLK+ESG HRV
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVAV+PEA++IE I+INP DL+ID YRASGAGGQH+NKT+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLPEAEDIE-IDINPVDLKIDVYRASGAGGQHVNKTESAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIVV+CQ++RSQ KN++ A+K+L +RI D +EQ + A R+ +GS +
Sbjct: 240 RITHLPTGIVVECQDERSQIKNRSKAMKVLKSRILDGLQQEQNARIAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>gi|407716994|ref|YP_006838274.1| peptide chain release factor 1 [Cycloclasticus sp. P1]
gi|407257330|gb|AFT67771.1| Peptide chain release factor 1 [Cycloclasticus sp. P1]
Length = 362
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 223/308 (72%), Gaps = 2/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+L KL+ S+R +E+ LL++ + ++ + +E++ L PIV Y NY ED +
Sbjct: 5 ILQKLDTLSERFEEIAGLLSEPSIQSDQNKFRSLSQEYAQLDPIVSTYQNYLATLEDNES 64
Query: 65 AKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
AK MLND + ++ A DE+ + + E E++ L+LPKD ND +N F+E+RAGTGGD
Sbjct: 65 AKAMLNDSDPGIKAMAKDELKDTQAALEKQENELQILLLPKDPNDGKNAFLEVRAGTGGD 124
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+A+F DL RMY+RF+E+ WKFEI+S + + GGYKEIIARI G +VYS+LKFESG H
Sbjct: 125 EAAIFSGDLYRMYLRFAEKKGWKFEIMSENQGDHGGYKEIIARIEGHDVYSQLKFESGAH 184
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE+QGR+HTSACTVA++PEADE +DI IN DLR+DT+RASG+GGQH+NKTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAIMPEADEKDDIEINAGDLRVDTFRASGSGGQHVNKTDS 244
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+R+TH+PTG VV+CQ++RSQHKN+A A+ +L ARI ++ + + A+ RR +GS
Sbjct: 245 AIRLTHLPTGTVVECQDERSQHKNRARAMSLLKARIMTAEQEKADAEQAESRRSQVGSGD 304
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 305 RSERIRTY 312
>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
Length = 361
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
Length = 361
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFERWQQTQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR+ A DE+ AK D+E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DIETAELMLDDPEMRDLAQDELQAAKVASEDLEQQLQVLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E WK EI+S S E GGYKE+IA+++G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKVVGDGAYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|365107372|ref|ZP_09335706.1| peptide chain release factor 1 [Citrobacter freundii 4_7_47CFAA]
gi|363641481|gb|EHL80873.1| peptide chain release factor 1 [Citrobacter freundii 4_7_47CFAA]
Length = 360
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E ++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKINGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGS 300
>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella novicida U112]
gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella novicida FTE]
gi|166223559|sp|A0Q844.1|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
novicida FTE]
Length = 361
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica LVS]
gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica OSU18]
gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica 257]
gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica URFT1]
gi|421751108|ref|ZP_16188166.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis AS_713]
gi|421752963|ref|ZP_16189972.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 831]
gi|421756695|ref|ZP_16193597.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700103]
gi|421758565|ref|ZP_16195410.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70102010]
gi|422939253|ref|YP_007012400.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC200]
gi|423051366|ref|YP_007009800.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica F92]
gi|424673831|ref|ZP_18110762.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70001275]
gi|119361542|sp|Q2A1Q0.1|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361543|sp|Q0BKE8.1|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223558|sp|A7NE96.1|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223560|sp|A4IWC1.1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica LVS]
gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica OSU18]
gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica 257]
gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294404|gb|AFT93310.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC200]
gi|409088776|gb|EKM88835.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 831]
gi|409089094|gb|EKM89148.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis AS_713]
gi|409092122|gb|EKM92102.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70102010]
gi|409093356|gb|EKM93303.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700103]
gi|417435606|gb|EKT90496.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70001275]
gi|421952088|gb|AFX71337.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica F92]
Length = 361
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ +LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691540|sp|B2SFF6.1|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 361
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ +LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC198]
gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379716536|ref|YP_005304872.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725219|ref|YP_005317405.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TI0902]
gi|385793928|ref|YP_005830334.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis NE061598]
gi|421754782|ref|ZP_16191747.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700075]
gi|61214577|sp|Q5NIA8.1|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361541|sp|Q14JR1.1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC198]
gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis NE061598]
gi|377826668|gb|AFB79916.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TI0902]
gi|377828213|gb|AFB78292.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TIGB03]
gi|409090449|gb|EKM90467.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700075]
Length = 361
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ +LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|416242626|ref|ZP_11633662.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
Length = 359
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ + ++ K + + EHS L I + ++ +
Sbjct: 1 MKESLRHRLDQMVDRFEEVTVLLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA E+L+D EM+ ALDEI +A+ I +E + ++LPKD NDK F+EIRAGTG
Sbjct: 61 DLQTANELLSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY ++++ W+ E++S + E GGYKEIIAR+ G+ VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVAV+PE + + + INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+V +CQ +RSQH NK A+K+L+ARI+ +K++ Q T+ MRR L+GS
Sbjct: 241 DSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRNLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|416224932|ref|ZP_11626756.1| peptide chain release factor 1, partial [Moraxella catarrhalis
103P14B1]
gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1]
Length = 319
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ + ++ K + + EHS L I + ++ +
Sbjct: 1 MKESLRHRLDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA E+L+D EM+ ALDEI +A+ I +E + ++LPKD NDK F+EIRAGTG
Sbjct: 61 DLQTANELLSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY ++++ W+ E++S + E GGYKEIIAR+ G+ VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVAV+PE + + + INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+V +CQ +RSQH NK A+K+L+ARI+ +K++ Q T+ MRR L+GS
Sbjct: 241 DSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRNLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
Length = 361
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + +
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALK 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166223599|sp|A1AX02.1|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 363
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 227/302 (75%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + +KLE+ S RL+E+D +L+ +V +++K + K E + L P+ + + Y +
Sbjct: 1 MHASIFAKLEQLSMRLEEVDVMLSNPKVASDVKKFTKLSIERAQLTPVNQQFQAYLSHHR 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ AK ML +D++++ A +E+ KK++ + LE+KK +LPKD ND RNI IEIRAG
Sbjct: 61 NLEDAKLMLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+++F ++L +MY R++E+ W+ E+IS SL E GG+KEIIARI G+ VYSKLKFE
Sbjct: 121 TGGNEASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACT+A++PE + IE++NIN +D+R+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KT+SAVRITHIPTG V +CQ+ RSQHKNKA AL +L +RI D + +EQ A R+ LI
Sbjct: 241 KTNSAVRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIFDLQQQEQHKEQASTRKELI 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
gi|166223589|sp|A4XR61.1|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
mendocina ymp]
Length = 360
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV + + +E++ + P++ + +K+
Sbjct: 1 MKASLLNKLDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ AK+ + +E ++++++LPKD ND RN+++E+RAG
Sbjct: 61 DLEGAQALLKESDPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
gi|416156064|ref|ZP_11604303.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
gi|416217640|ref|ZP_11624373.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
gi|416230455|ref|ZP_11628421.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
gi|416235687|ref|ZP_11630287.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
gi|416240552|ref|ZP_11632523.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
gi|416246745|ref|ZP_11635203.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
gi|416251199|ref|ZP_11637607.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
gi|416254756|ref|ZP_11638858.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
gi|421779840|ref|ZP_16216330.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis BBH18]
gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
gi|407812634|gb|EKF83418.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
Length = 359
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ + ++ K + + EHS L I + ++ +
Sbjct: 1 MKESLRHRLDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA E+L+D EM+ ALDEI +A+ I +E + ++LPKD NDK F+EIRAGTG
Sbjct: 61 DLQTANELLSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY ++++ W+ E++S + E GGYKEIIAR+ G+ VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVAV+PE + + + INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+V +CQ +RSQH NK A+K+L+ARI+ +K++ Q T+ MRR L+GS
Sbjct: 241 DSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRNLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|387886341|ref|YP_006316640.1| peptide chain release factor 1 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871157|gb|AFJ43164.1| peptide chain release factor 1 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 361
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL + + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKTKLQSLIERHEEVSALLGEANIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D+E+ A +E+ LA + I +E E++ L+LP+D ND NIF+EIRAG
Sbjct: 61 DKEAAYEMLNEKDVELVEMAKEELKLANEAIERLEDELQILLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E++S S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
Length = 364
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 224/314 (71%), Gaps = 4/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ +R +E+ LL+ V N + + RE++ + P+V+ + ++
Sbjct: 1 MKPSIQSRLEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLV 60
Query: 61 DIITAKEMLND----LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
DI A+E+ D +MR A +E++ A++ +++ E++ L+LPKD ND +N+F+E+R
Sbjct: 61 DINEARELSKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLK 176
AGTGGDE+A+F DL RMY RF+ER W+ EI+S S E GGYKE+IAR+ G VY LK
Sbjct: 121 AGTGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLK 180
Query: 177 FESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQH 236
FESGVHRVQRVP+TE+QGRIHTSACTVAV+PEADE E + IN DLR+DT+RASGAGGQH
Sbjct: 181 FESGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQH 240
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+NKTDSA+RITH+P+G+VV+CQ +RSQHKN+A A+ +L +R+++ + + A+ R+
Sbjct: 241 VNKTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKS 300
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 301 LVGSGDRSERIRTY 314
>gi|420371628|ref|ZP_14871996.1| peptide chain release factor 1 [Shigella flexneri 1235-66]
gi|391318959|gb|EIQ76039.1| peptide chain release factor 1 [Shigella flexneri 1235-66]
Length = 360
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E ++ L+LP D +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKCEQLEQHLQVLLLPTDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKEIIA++ G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEIIAKVSGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGS 300
>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC022]
Length = 361
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/302 (51%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL++ + ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ LA + I +E E++ +LP+D ND N+F+EIRAG
Sbjct: 61 DKQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQR+P TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRIPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
gi|409913549|ref|YP_006892014.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
gi|61214645|sp|Q748B1.1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
Length = 355
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 223/306 (72%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+E+ R EL+ LL V N ++ + REH+ L P++E Y YKK+ E++
Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D EM+ A E+ ++R ++E EIK L+LP+D ND RN+ +EIRAGTGGDES
Sbjct: 61 NRELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY RF+ERN WK E++S S SE GG+KEI+A I G V++KLK+ESG HRV
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVAV+PEA++IE ++INPADL+ID YRASGAGGQH+NKT+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLPEAEDIE-VDINPADLKIDVYRASGAGGQHVNKTESAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITHIPTGIVV+CQ++RSQ KN+A A+K+L +I D +EQ + A R+ +GS +
Sbjct: 240 RITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
Length = 361
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK ++E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DLATAELMLDDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E WK EI+S S E GGYKE+IA++ G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|345430012|ref|YP_004823132.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
Length = 360
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N
Sbjct: 1 MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ ML+D EM+ A EI +K I D+E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIAEAELMLDDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
Length = 359
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 213/294 (72%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
+KLE+ ++R E+ LL + E ++ + RE++ L P++E Y Y+ D+ A+
Sbjct: 7 AKLERIAERFGEVMALLAEPETQSDQGRFRDLSREYAQLQPLMECYERYRDAERDLAAAE 66
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
E+L D EM A DEI A++R+ +E E++ L++P D ND+ N F+EIRAGTGG E+AL
Sbjct: 67 ELLTDPEMAALARDEIEAARERLDVLEPELQTLLIPPDPNDQCNAFLEIRAGTGGAEAAL 126
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
F DL+RMY+R++E W+ E +S S E+GGYKE++ R+ G VYS+LKFE G HRVQR
Sbjct: 127 FAGDLMRMYMRYAELLGWRTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQR 186
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
VP+TE+QGRIHTSACTVAV+PEA+ I+ I IN DLRIDTYR+SGAGGQH+NKTDSA+RI
Sbjct: 187 VPETESQGRIHTSACTVAVLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIRI 246
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
TH+P+GIVV+CQ +RSQHKN+A A+ +L A++ Q S ++ R+L +GS
Sbjct: 247 THLPSGIVVECQEERSQHKNRAKAMSLLHAKLLAGARETQASEQSESRKLQVGS 300
>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL V N+ + +E+S L +V +N +KK+N
Sbjct: 1 MKESIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM
3043]
gi|119361523|sp|Q1QXC6.1|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter
salexigens DSM 3043]
Length = 361
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 225/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK + ++L+ F +R +EL LL + +V +DY RE++ L P++E + +Y++
Sbjct: 1 MKATLRTRLDGFQERFEELAALLAEPDVIADQARFRDYS---REYAELEPLIEAWRSYRR 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+D+ A++M +D EMR A +E A+ R+ ++ ++K+L++P+D +D N+F+EI
Sbjct: 58 TEDDLEAAEQMREDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+ALF DL RMY R++E+ W+ E+I+ S E GGYKE+IAR+ G NVY++L
Sbjct: 118 RAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+ EA + ++ +N DLR+DT+R+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+N TDSA+RITH+P+G+VV+CQ +RSQHKN+A A+ +L AR+K S + Q+ A RR
Sbjct: 238 HVNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQQQADTRR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|387889182|ref|YP_006319480.1| peptide chain release factor 1 [Escherichia blattae DSM 4481]
gi|414593613|ref|ZP_11443256.1| peptide chain release factor 1 [Escherichia blattae NBRC 105725]
gi|386924015|gb|AFJ46969.1| peptide chain release factor 1 [Escherichia blattae DSM 4481]
gi|403195513|dbj|GAB80908.1| peptide chain release factor 1 [Escherichia blattae NBRC 105725]
Length = 360
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + +E++ L + + +++ E
Sbjct: 1 MKPSIVAKLEALYERHQEVQALLGDADTIADQDRFRALSKEYAQLSDVARCFLQWRQNQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EM+ A +E+ A+++ +E E++ L+LP+D +D+RN F+EIRAGTG
Sbjct: 61 DIETAESMLDDPEMKEMAQEELQAARQQREALETELQVLLLPRDPDDERNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E++S S E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEVMSASEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++L ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAELAKRQQEEASTRRNLLGS 300
>gi|407693843|ref|YP_006818632.1| peptide chain release factor 1 [Actinobacillus suis H91-0380]
gi|407389900|gb|AFU20393.1| peptide chain release factor 1 [Actinobacillus suis H91-0380]
Length = 360
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL V N+ + +E+S L +V +N +KK+N
Sbjct: 1 MKESIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|384082296|ref|ZP_09993471.1| peptide chain release factor 1 [gamma proteobacterium HIMB30]
Length = 362
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LS+L++ R +EL LL EV N + +E+S + P+V+L Y+ ++
Sbjct: 1 MKPSLLSRLDQLVDRHEELAALLADPEVIGNQTQFVAFSQEYSEIEPVVQLVQKYRVLSA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ + L +D +MR A E+ ++++ ++ E+K ++PKD D R+ F+EIRAG
Sbjct: 61 DLVELESYLSGDDADMRELADSELPDTRQQLEALDAELKVALIPKDPADSRSAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY++F+E WK E++S S +E+GGYKE++ ++ G VY +LKFE
Sbjct: 121 TGGDEAALFAGDLSRMYLKFAETQGWKTEVLSESKAELGGYKEVVMKVAGDRVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+ EAD + + I+ DLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMAEADPMAETTIDTKDLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKNKA AL +L AR++D+ +EQQ+ A R+ L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNKARALSLLQARLEDAARQEQQAKEASERKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|386288624|ref|ZP_10065764.1| peptide chain release factor 1 [gamma proteobacterium BDW918]
gi|385278179|gb|EIF42151.1| peptide chain release factor 1 [gamma proteobacterium BDW918]
Length = 360
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ R +E+ LL+ E+ N + +E++ + +V+ Y +Y+++ E
Sbjct: 1 MKASLVSKLDNLLDRYEEIGALLSDPEIIGNQDRFRGLSQEYAEIESVVQSYGHYRQVAE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A ML +D +MR A +E+ AK ++ +E+E++ L+LPKD ND N+F+EIRAG
Sbjct: 61 DLAEATAMLSEDDADMREMAEEEVKAAKAKLETLEVELQTLLLPKDPNDSHNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S E GGYKEII+R+ G VY LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAERKGWRVEVLSERQGEHGGYKEIISRVAGQEVYGHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+ E +E ++I IN DLRIDT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMAEPEEADEILINKGDLRIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRI HIPTGIVV+CQ++RSQHKNKA A+ +L A++ D+ + + A RR L+
Sbjct: 241 TTDSAVRIVHIPTGIVVECQDERSQHKNKARAMSLLTAKVNDAASSKNLAEQATERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
gi|238692126|sp|B3E628.1|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
Length = 355
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 220/306 (71%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K++ R +EL+ LL+ V N ++ K REH+ L P++E + YKK+ +++
Sbjct: 1 MFDKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEE 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D EM+ A +EI+ + ++ EIK L+LPKD ND R++ +EIRAGTGGDES
Sbjct: 61 NQELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY RF+E+N WK E++S S SE GGYKE+IA I G +VY+KLK+ESG HRV
Sbjct: 121 ALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVA++ EA+++ DI+INPADL+ID YR+SGAGGQH+N TDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMAEAEDV-DIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITHIPTG VV CQ +RSQ KN+A A+K+L RI D+ +EQ + A R+ +GS +
Sbjct: 240 RITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQNAKLAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>gi|419954307|ref|ZP_14470446.1| peptide chain release factor 1 [Pseudomonas stutzeri TS44]
gi|387968858|gb|EIK53144.1| peptide chain release factor 1 [Pseudomonas stutzeri TS44]
Length = 360
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL E+ ++ + RE++ + P++ Y +K+ +
Sbjct: 1 MKASLLNKLDVLQDRFEELTALLGDAEIISDQNRFRAYSREYAEVEPVIAAYRQLRKVQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ A+ ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLAGAQALLKDSDPDLREMAEEEVVEARAQLETLETNLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GG+KE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSENEGEHGGFKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYRASGAGGQHIN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAVRITHLPTGIVVECQEERSQHKNRARAMAWLAAKLQDQQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|336450052|ref|ZP_08620509.1| peptide chain release factor 1 [Idiomarina sp. A28L]
gi|336283209|gb|EGN76416.1| peptide chain release factor 1 [Idiomarina sp. A28L]
Length = 364
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K ++SKLE +R +EL+ LL ++ N + RE+S L V+ + Y++ E
Sbjct: 2 LKASLVSKLESLLERHEELEVLLGDADIITNQDKFRALSREYSQLEDAVKCFRQYQQSLE 61
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TAKEM++ D EMR A +E+ A+ + ++ E++ L+LPKD ND R ++EIRAG
Sbjct: 62 DLATAKEMVSESDAEMREMAFEEVQAAESSLVELASELQVLLLPKDPNDDRPCYLEIRAG 121
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ERN W+ IIS + E GG+KEII ++G Y K+KFE
Sbjct: 122 AGGDEAAIFAGDLFRMYSRYAERNSWRMNIISANEGEHGGFKEIIVHMMGDGAYGKMKFE 181
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E I+INPADLRIDTYRASGAGGQH+N
Sbjct: 182 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAIDINPADLRIDTYRASGAGGQHVN 241
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSAVR+TH+PTG+VV+CQ +RSQHKNKA A+ +L +R++ ++ +++ RR L+
Sbjct: 242 RTDSAVRLTHLPTGVVVECQEERSQHKNKAKAMSVLQSRLQAAEDARREAAEQSTRRSLV 301
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 302 GSGDRSERIRTY 313
>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 360
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL V N+ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
gi|254790883|sp|B8F526.1|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
Length = 360
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ S+R +EL LL + ++ + +C +E+S L +V +N +KK++
Sbjct: 1 MKASIINKLDSLSERHEELQALLGDATIISDQEKFCAYSKEYSQLEEVVSTFNRWKKLHS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M+ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + +Q A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|399543904|ref|YP_006557212.1| peptide chain release factor 1 [Marinobacter sp. BSs20148]
gi|399159236|gb|AFP29799.1| Peptide chain release factor 1 [Marinobacter sp. BSs20148]
Length = 362
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE+ +R +E+ LL+ V N + + RE++ + P+V+ + ++
Sbjct: 1 MKPSIQSRLEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A+E+ D +MR A +E+ A++ +++ E++ L+LPKD ND +N+F+E+RAG
Sbjct: 61 DINEARELCKDGDADMREMAEEELRTAQQSSEELDAELQGLMLPKDPNDGKNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+ER W+ EI+S S E GGYKE+IAR+ G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASDGEHGGYKEVIARVAGSGVYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGRIHTSACTVAV+PEADE E + IN DLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+G+VV+CQ +RSQHKN+A A+ +L +R+++ + + A+ R+ L+
Sbjct: 241 KTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|333899125|ref|YP_004472998.1| peptide chain release factor 1 [Pseudomonas fulva 12-X]
gi|333114390|gb|AEF20904.1| Peptide chain release factor 1 [Pseudomonas fulva 12-X]
Length = 360
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ R +E+ LL EV +N + +E++ + P++ + ++K+
Sbjct: 1 MKASLINKLDLLQDRFEEVTALLGDAEVISNQTQFRAYSKEYAEIEPVIAAFREFRKVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A +L +D ++R A +E++ A+ R+ ++E +++++LPKD ND RN+F+E+RAG
Sbjct: 61 DLEGALALLKDSDPDLREMAEEEVDTARARLAELEDSLQRMLLPKDPNDGRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KE+IAR+ G NV+ KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVFGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQMAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A++KD + + R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLKDQQDAAAHKEISDTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|347819820|ref|ZP_08873254.1| peptide chain release factor 1 [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 362
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++LE+ ++RL ELDFLL++ ++ ++ Y REH+ + + Y Y +
Sbjct: 1 MKPFLRNQLERHARRLTELDFLLSRADIMADMAQYRAIAREHAEVTQVAGRYARYLQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++ML D ++ A +EI + + ++ +++L+LPKD + RN F+EIRAGTG
Sbjct: 61 DLAGARQMLADPDLAEMAQEEIASSLAELQQLQDALQRLLLPKDPDAARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +L RMY R + WK E++S S +E+GG KE + RI G VY L+FESG
Sbjct: 121 GDESALFAGELTRMYTRHAASVGWKVEVLSESAAELGGCKETVLRIEGEQVYGALQFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PE D + I +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEPDAAQAIALNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A +R+ L+GS
Sbjct: 241 DSAVRVVHLPTGIVAECQDGRSQHSNKARALQVLQARIQEKERSERAARQAALRKGLVGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSDRIRTY 310
>gi|419802521|ref|ZP_14327707.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK262]
gi|419844745|ref|ZP_14368032.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK2019]
gi|385190081|gb|EIF37531.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK262]
gi|386416671|gb|EIJ31163.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK2019]
Length = 360
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N
Sbjct: 1 MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ ML+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIAEAELMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
gi|119361504|sp|Q0VS77.1|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
Length = 361
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+K + R +EL LL+ +V +N + RE++ + P+V+ Y Y++ E
Sbjct: 1 MKASLQGKLDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVE 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D AK M +D +MR +E A++R+ + E++KL+LPKD D N+F+E+RAG
Sbjct: 61 DHGAAKAMQDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++++ WK E++S S E GGYKE+IAR+IG VYS++KFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++ EA+++ DI I DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV+CQ++RSQHKNKA A+ +L A++ D++ + A R+ L+
Sbjct: 241 TTDSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|389706259|ref|ZP_10186349.1| peptide chain release factor 1 [Acinetobacter sp. HA]
gi|388610736|gb|EIM39851.1| peptide chain release factor 1 [Acinetobacter sp. HA]
Length = 362
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + + REH+ L I E++ YK+ E
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADAEVISDNKRFRQLSREHNDLTEITEVWTKYKQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A +EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAQAMLSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKE+I + G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESQGWRIEILSENEGEHGGYKEVICLVNGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTSVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ++RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQDERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
33392]
gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
33392]
Length = 360
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N
Sbjct: 1 MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ ML+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIAEAELMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|423108930|ref|ZP_17096625.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5243]
gi|423114890|ref|ZP_17102581.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5245]
gi|376383124|gb|EHS95852.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5243]
gi|376383765|gb|EHS96492.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5245]
Length = 360
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQLQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIEAAQMMLDDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQAEASERRNLLGS 300
>gi|375261422|ref|YP_005020592.1| peptide chain release factor 1 [Klebsiella oxytoca KCTC 1686]
gi|397658524|ref|YP_006499226.1| peptide chain release factor 1 [Klebsiella oxytoca E718]
gi|402840452|ref|ZP_10888916.1| peptide chain release factor 1 [Klebsiella sp. OBRC7]
gi|423103536|ref|ZP_17091238.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5242]
gi|365910900|gb|AEX06353.1| peptide chain release factor 1 [Klebsiella oxytoca KCTC 1686]
gi|376385178|gb|EHS97899.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5242]
gi|394346815|gb|AFN32936.1| Peptide chain release factor 1 [Klebsiella oxytoca E718]
gi|402285669|gb|EJU34150.1| peptide chain release factor 1 [Klebsiella sp. OBRC7]
Length = 360
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQLQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIEAAQMMLDDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQAEASERRNLLGS 300
>gi|389795949|ref|ZP_10199055.1| peptide chain release factor 1 [Rhodanobacter fulvus Jip2]
gi|388429999|gb|EIL87213.1| peptide chain release factor 1 [Rhodanobacter fulvus Jip2]
Length = 359
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 218/303 (71%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE ++R +E+ LL Q +VH + + +E++ L P+ + + + ++ A+
Sbjct: 8 KLEALAERHEEIGLLLAQPDVHADNARFRALSQEYAQLEPVAASLHEHDQAEHELADARA 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E+R A D++ ++R+ +++ E++ L+LPKD D ++++E+RAGTGGDE+A+F
Sbjct: 68 MLDDAELREMAADDVRRLEQRLRELDDELQILLLPKDPRDDASLYLEVRAGTGGDEAAIF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+RF+E W+ EI+S E GGYKE++ARI G YS+LKFESG HRVQRV
Sbjct: 128 AGDLLRMYLRFAESRRWQVEILSEHAGEHGGYKEVVARIEGKGAYSQLKFESGTHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGRIHTSA TVA++P DEI++I INPADL+ DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRIHTSAATVAIMPVPDEIDEIEINPADLKTDTFRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
HIPTG VV+CQ++RSQHKN+A AL +L AR+ D + +Q ++ RRL +GS + +
Sbjct: 248 HIPTGTVVECQDERSQHKNRARALSLLKARLLDVERSKQSEERSEARRLQVGSGDRSQRI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
Length = 361
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|419838985|ref|ZP_14362403.1| peptide chain release factor 1 [Haemophilus haemolyticus HK386]
gi|386909696|gb|EIJ74360.1| peptide chain release factor 1 [Haemophilus haemolyticus HK386]
Length = 361
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G +VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGESVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
Length = 360
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + SKLE ++R +EL LL + E+ + K + + +E++ L P++ + ++++
Sbjct: 1 MKDSIRSKLETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQN 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +K +L D E+R A +EI +K++ ++ E+ L+LP D NDKRNIF+EIRAG
Sbjct: 61 VLDESKALLQDQDPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF +DLLRMY+R+ E+ W+ EI+ S E GG+KEII RI+G YS+LKFE
Sbjct: 121 TGGDEAALFASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEA+EI++I+INPADLR+DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L ++K + + + RR LI
Sbjct: 241 KTDSAIRITHLPSGIVVECQDERSQHKNRARAMSLLRTKLKLEEEEKLVAEETATRRSLI 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
Length = 361
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL+ E +N + + + RE+S L +V + Y+ +
Sbjct: 1 MKSSLLHKLELLVERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQTAKD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML +D +MR A +E++ AK+ I +E+E+++L+LPKD D N+F+EIRAG
Sbjct: 61 DMEAAQLMLLDDDPDMREMAEEELDAAKEAIEALEIELQRLLLPKDPKDSANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E++S E GGYKEII R+ G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+ EA E++ I IN AD+R+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ++RSQHKN+A A+ +L A++ + + S A+ RR L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEKAASEQAQERRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|423124391|ref|ZP_17112070.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5250]
gi|376399836|gb|EHT12449.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5250]
Length = 393
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ +
Sbjct: 34 MKPSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQLQD 93
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 94 DIEAAQMMLDDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDERNAFVEVRAGTG 153
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 154 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 213
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 214 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFRSSGAGGQHVNTT 273
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ +Q A RR L+GS
Sbjct: 274 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQAEASERRNLLGS 333
>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
gi|342904362|ref|ZP_08726163.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21621]
gi|373467385|ref|ZP_09558684.1| peptide chain release factor 1 [Haemophilus sp. oral taxon 851 str.
F0397]
gi|378697782|ref|YP_005179740.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
KW20]
gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
gi|341953602|gb|EGT80106.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21621]
gi|371758920|gb|EHO47676.1| peptide chain release factor 1 [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 361
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
Length = 360
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQCWQQTQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A +E+ AK +E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DLATAELMLDDPEMRDLAQEELKAAKAASETLEQQLQVLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E WK EI+S S E GGYKE+IA+++G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVVGDGAYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|417845579|ref|ZP_12491605.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21639]
gi|341954648|gb|EGT81121.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21639]
Length = 361
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKTEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|381158256|ref|ZP_09867489.1| peptide chain release factor 1 [Thiorhodovibrio sp. 970]
gi|380879614|gb|EIC21705.1| peptide chain release factor 1 [Thiorhodovibrio sp. 970]
Length = 359
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 214/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE+ ++R E+ LL ++ + RE++ L P+++ Y NY +
Sbjct: 1 MNDSLRGKLERLAERFGEITALLADPATQDDKNQFRDLGREYAQLEPLIDCYQNYCACED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ TA+ ML D EM A +EI + +E E+K+L+LP D ND+RN+++E+RAGTG
Sbjct: 61 SMATAEAMLADPEMAELAREEITSTQAERDALEPELKRLLLPPDPNDQRNVYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DL RMY+R+ E W+ E IS S E+GGYKEI+ RI G VY++LKFE+G
Sbjct: 121 GAEAALFAADLTRMYLRYGEHQGWRSETISASDGELGGYKEIVLRISGKQVYARLKFEAG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVA++PE + +E+ I+ DLR+DTYRASGAGGQH+NKT
Sbjct: 181 THRVQRVPETESQGRVHTSACTVAILPEPETVEETAISSGDLRVDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+P+GIVV+CQ++RSQHKN+A A+ +L AR+ D+ + ++ RRL +GS
Sbjct: 241 DSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQARLLDAAQSAVTAERSESRRLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
Length = 360
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/300 (54%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL E + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCFTDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELRDAKEKSEQLEQQLQLLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQEEASTRRNLLGS 300
>gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 361
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL + V ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ A + I +E E++ L+LP+D ND NIF+EIRAG
Sbjct: 61 DKEAAYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E++S S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|61252075|sp|P43917.2|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 1 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|421504253|ref|ZP_15951196.1| peptide chain release factor 1 [Pseudomonas mendocina DLHK]
gi|400345023|gb|EJO93390.1| peptide chain release factor 1 [Pseudomonas mendocina DLHK]
Length = 360
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/315 (48%), Positives = 223/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L+KL+ S R +EL LL EV + Y K E++ + P++ + +K
Sbjct: 1 MKASLLNKLDNLSDRFEELTALLGDAEVIFKQTQFRAYSK---EYAEIEPVIATFRELRK 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ D+ A+ +L +D ++R A +E+ AK+ + +E ++++++LPKD ND RN+++E+
Sbjct: 58 VQSDLEGAQALLKESDPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEV 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KE+IAR+ G NVY+KL
Sbjct: 118 RAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQ
Sbjct: 178 KFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+N TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A+++D + ++ R+
Sbjct: 238 HVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKEISETRK 297
Query: 296 LLIGSVQKKSPLNIF 310
LL+GS + + +
Sbjct: 298 LLVGSGDRSERIRTY 312
>gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli]
Length = 360
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
Length = 360
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ S R +EL LL EV + + +E++ + P++ + +K+
Sbjct: 1 MKASLLNKLDNLSDRFEELTALLGDAEVISKQSQFRAYSKEYAEIEPVIATFRELRKVQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A E++ AK+ + +E ++++++LPKD ND RN+++EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGRNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S + E GG+KE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITHIPTG VV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 TTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|442608870|ref|ZP_21023611.1| Peptide chain release factor 1 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441749482|emb|CCQ09673.1| Peptide chain release factor 1 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 361
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ LL+ EV + + + +E++ L +V+ + Y++ E
Sbjct: 1 MKESVYRKLESLTERYEEVQALLSDPEVIGDQNRFRELSKEYAELEDVVKAFAAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI TA+EML +D +MR A +E AK R+ ++ E++ L++PKD D N+F+E+RAG
Sbjct: 61 DISTAEEMLKDSDPDMREMAQEEYKEAKVRVEKLDGELQILMIPKDPRDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E+IS + E GG+KE+IA I G V+ KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETQKWKVEVISCNEGEHGGFKEVIANITGEGVFGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INPADL+IDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMPELPEAEAIEINPADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A AL +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKALSVLSARLQQAEDEKRAAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [gamma proteobacterium HTCC2207]
gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [gamma proteobacterium HTCC2207]
Length = 360
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 232/315 (73%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKL+ S+R +E+ LL+ ++ ++ + +E+S L +V+ Y +YK + E
Sbjct: 1 MKASILSKLDHLSERYEEVGALLSDGDIISDQNRFRTLSKEYSELELLVKTYGSYKDVME 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I AK +L +D +MR+ A +E+ ++R +ELEI+KL+LPKD D +N+F+EIRAG
Sbjct: 61 NIEEAKLLLKDSDTDMRDMAQEEMRSGEERRQVLELEIQKLLLPKDPKDSKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++E N WK EIIS + + GGYKE+IARI+G VYSKLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARIVGQGVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++ EADE + I IN DLR+DT+RASG+GGQH+N
Sbjct: 181 SGAHRVQRVPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDTFRASGSGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRR 295
KTDSA+R+TH+P+G+VV+CQ++RSQHKN+A A+ +L AR+ +D + ++QS+ R+
Sbjct: 241 KTDSAIRLTHLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQDEAVAKEQSD---QRK 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 NLVGSGDRSERIRTY 312
>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
Length = 361
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
Length = 361
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|359298769|ref|ZP_09184608.1| peptide chain release factor 1 [Haemophilus [parainfluenzae] CCUG
13788]
gi|402306985|ref|ZP_10826018.1| peptide chain release factor 1 [Haemophilus sputorum HK 2154]
gi|400373829|gb|EJP26756.1| peptide chain release factor 1 [Haemophilus sputorum HK 2154]
Length = 360
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ S+R +EL LL V ++ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIISKLDSLSERHEELQALLGDASVISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
Length = 361
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
D2]
gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
D2]
Length = 361
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E++ LL++ V ++ + +E++ L + +++N Y++ +
Sbjct: 1 MKESVYRKLETLVERYEEVEALLSEASVISDQDRFRALSKEYAELEDVSKVFNAYRQAEQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM D +MR+ A DE AK ++ + E++ L+LPKD D N+++E+RAG
Sbjct: 61 DLVAAEEMFKDEDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+E WK EI+S + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+PE E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A A+ +L +R++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRHAEEATQRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|343518805|ref|ZP_08755793.1| peptide chain release factor 1 [Haemophilus pittmaniae HK 85]
gi|343393384|gb|EGV05941.1| peptide chain release factor 1 [Haemophilus pittmaniae HK 85]
Length = 361
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V + + +E+S L +V+ +N + ++N
Sbjct: 2 MKESIIAKLDSLKERYEELEALLGDASVIADQDKFRAYSKEYSQLEEVVKCFNRWNQLNT 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ ML+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIADAELMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|366157478|ref|ZP_09457340.1| peptide chain release factor 1 [Escherichia sp. TW09308]
Length = 360
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|416896693|ref|ZP_11926540.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
gi|417112821|ref|ZP_11964741.1| peptide chain release factor 1 [Escherichia coli 1.2741]
gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
gi|386142431|gb|EIG83569.1| peptide chain release factor 1 [Escherichia coli 1.2741]
Length = 360
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 360
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL V N+ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602]
gi|384258166|ref|YP_005402100.1| peptide chain release factor 1 [Rahnella aquatilis HX2]
gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602]
gi|380754142|gb|AFE58533.1| peptide chain release factor 1 [Rahnella aquatilis HX2]
Length = 360
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ +L V + + RE+S L + E + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQAMLGDAGVIADQDKFRSLSREYSQLTAVSECFLAWRQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A DEI K I ++E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQDEIKECKANIEELEEKLQVLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S S E GGYKE+IA+I G Y + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKISGEGAYGQFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAEEASTRRNLLGS 300
>gi|407794321|ref|ZP_11141348.1| protein chain release factor A [Idiomarina xiamenensis 10-D-4]
gi|407212921|gb|EKE82782.1| protein chain release factor A [Idiomarina xiamenensis 10-D-4]
Length = 362
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ LL++ V N+ + +E+S L I ++ Y++ E
Sbjct: 1 MNPSIMRKLEGLLERYQEVQALLSEPSVINDQNRFRALSKEYSQLEEIAAEFSRYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TA EML +D EMR A DE++ AK++ + ++ L+LP+D ND R+ ++EIRAG
Sbjct: 61 DVQTAAEMLQEDDAEMRAMAEDELSQAKQQQEQLTQSLQVLLLPRDPNDDRSCYVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E+ WK ++S S E GGYKE+IA + G Y ++KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEQRGWKVSMVSASDGEHGGYKEVIAHVSGEGCYGRMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E I INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L AR++ + ++Q A RR L+
Sbjct: 241 RTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSVLQARLQKLEDDKRQQEEASTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
Length = 359
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++L++ RL+EL+ L +++ +I K +EH+ +++ Y +K+
Sbjct: 1 MKESLRAQLDRMQNRLEELNAQLASEDIGKDISLLKKLNQEHAETSEVLDTYALWKQAGA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A++M + +MR FA +EI A+ R+ + I+ L+LP+D +D RN +EIRAGTG
Sbjct: 61 DLEAARQMREEPDMREFADEEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++E W+ EI+S S SE+GGY+E+I ++ G VY +L++ESG
Sbjct: 121 GDESALFAGDLLRMYLRYAEHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ EA+ DI I+P DLRID +RASGAGGQH+NKT
Sbjct: 181 AHRVQRVPVTESQGRIHTSACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SAVRITH+PTGIV +CQ+DRSQH+N+ A+ +LL R++D++ RE+ + T+ R+ L+GS
Sbjct: 241 ESAVRITHLPTGIVAECQDDRSQHRNRDKAMTVLLTRLRDARERERAAETSAHRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|238692365|sp|B3GZJ0.1|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 360
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL V N+ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M+ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189039973|sp|B0TX37.1|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 361
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ +R +E+ LL + V ++ + +E+S L PIV + Y + E
Sbjct: 1 MKDSIKAKLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ A + I +E E++ L+LP+D ND NIF+EIRAG
Sbjct: 61 DKEAAYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E++S S E GGYKEII+RI G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+INPAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|421724824|ref|ZP_16164031.1| peptide chain release factor 1 [Klebsiella oxytoca M5al]
gi|410374393|gb|EKP29067.1| peptide chain release factor 1 [Klebsiella oxytoca M5al]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQLQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIEAAQMMLDDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +I+P+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDISPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQAEASERRNLLGS 300
>gi|432372500|ref|ZP_19615545.1| peptide chain release factor 1 [Escherichia coli KTE11]
gi|430896993|gb|ELC19220.1| peptide chain release factor 1 [Escherichia coli KTE11]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELCEAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|419085661|ref|ZP_13631049.1| peptide chain release factor 1 [Escherichia coli DEC4B]
gi|377935250|gb|EHU99060.1| peptide chain release factor 1 [Escherichia coli DEC4B]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|422334607|ref|ZP_16415613.1| peptide chain release factor 1 [Escherichia coli 4_1_47FAA]
gi|373244413|gb|EHP63898.1| peptide chain release factor 1 [Escherichia coli 4_1_47FAA]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSAQLEEQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|425304802|ref|ZP_18694555.1| peptide chain release factor 1 [Escherichia coli N1]
gi|408230487|gb|EKI53882.1| peptide chain release factor 1 [Escherichia coli N1]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|420390801|ref|ZP_14890065.1| peptide chain release factor 1 [Escherichia coli EPEC C342-62]
gi|391313990|gb|EIQ71557.1| peptide chain release factor 1 [Escherichia coli EPEC C342-62]
Length = 360
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|425092113|ref|ZP_18495198.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405612088|gb|EKB84846.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 360
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ E
Sbjct: 1 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR AL+E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMALEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|345864857|ref|ZP_08817053.1| peptide chain release factor 1 [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345124094|gb|EGW53978.1| peptide chain release factor 1 [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 359
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 217/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE+ + R +E+ LL EV N+ + RE++ L P+VE Y ++ +
Sbjct: 1 MKPSLRGKLEQIADRFEEITALLADPEVQNDQNQFRNLSREYAQLEPVVESYRHFSQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI +A+EML D EM A +E+ A+ +E E++ L++P D ND+RNIF+EIRAGTG
Sbjct: 61 DIESAQEMLADPEMAELAAEELAEAEHTRDLLEPELQLLLIPADPNDQRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DL RMY+R+SE W+ E IS S E GGYKEII RI G VYS+LKFESG
Sbjct: 121 GAEAALFAGDLYRMYLRYSETLGWQTETISESPGEHGGYKEIICRISGNAVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PEAD I+++ IN DLRIDTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESQGRIHTSACTVAILPEADAIDEVEINSNDLRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV++CQ++RSQHKNKA A+ +L AR+ Q S A+ R+L +GS
Sbjct: 241 DSAVRITHLPTGIVIECQDERSQHKNKARAMSLLSARLLSQAQEAQSSAQAQNRKLQVGS 300
>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 361
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + NYK+ +
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D EMR A +E AK +I IE +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E++S + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ+ RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRDLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|408374426|ref|ZP_11172113.1| peptide chain release factor 1 [Alcanivorax hongdengensis A-11-3]
gi|407765701|gb|EKF74151.1| peptide chain release factor 1 [Alcanivorax hongdengensis A-11-3]
Length = 361
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+K + R +EL LL+ +V ++ + RE++ + P+V+ Y Y++ E
Sbjct: 1 MKASLQGKLDKLADRFEELAGLLSDPDVISSQNRFRDLSREYAEIDPVVKCYRIYQQAAE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ M +D +MR +E A+ R+ ++ E++KL+LP+D D N+F+E+RAG
Sbjct: 61 NLQAARAMQEDSDPDMREMGHEEAREAEARMAELGDELQKLMLPRDPRDGANVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY R+++R WK E++S S E GGYKE+IAR+IG VYS+LKFE
Sbjct: 121 TGGDEAALFAGDLFRMYSRYADRMGWKVELVSASEGEHGGYKEVIARVIGDGVYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++ EA+++ DI I DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAIMAEAEDLGDIQIRNEDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV+CQ++RSQHKNKA A+ +L AR+ D++ + A R+ L+
Sbjct: 241 TTDSAVRITHLPTGVVVECQDERSQHKNKAKAMSLLSARLYDAQQNAAHAEQAAERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|417840267|ref|ZP_12486411.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19107]
gi|341949077|gb|EGT75687.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19107]
Length = 361
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKVEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227]
gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
gi|416297695|ref|ZP_11651729.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
gi|417682319|ref|ZP_12331676.1| peptide chain release factor 1 [Shigella boydii 3594-74]
gi|420324918|ref|ZP_14826690.1| peptide chain release factor 1 [Shigella flexneri CCH060]
gi|420335544|ref|ZP_14837151.1| peptide chain release factor 1 [Shigella flexneri K-315]
gi|420352146|ref|ZP_14853300.1| peptide chain release factor 1 [Shigella boydii 4444-74]
gi|420379706|ref|ZP_14879182.1| peptide chain release factor 1 [Shigella dysenteriae 225-75]
gi|119361607|sp|Q31ZQ4.1|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238691757|sp|B2TZV9.1|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227]
gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74]
gi|391253958|gb|EIQ13121.1| peptide chain release factor 1 [Shigella flexneri CCH060]
gi|391265177|gb|EIQ24150.1| peptide chain release factor 1 [Shigella flexneri K-315]
gi|391284326|gb|EIQ42924.1| peptide chain release factor 1 [Shigella boydii 4444-74]
gi|391303806|gb|EIQ61634.1| peptide chain release factor 1 [Shigella dysenteriae 225-75]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EDL933]
gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
EDL933]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
Sakai]
gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
substr. MG1655]
gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301]
gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073]
gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046]
gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197]
gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89]
gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536]
gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401]
gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1]
gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A]
gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS]
gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4113]
gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4401]
gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4501]
gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4486]
gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4196]
gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4076]
gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC869]
gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC508]
gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
gi|170080839|ref|YP_001730159.1| peptide chain release factor 1 [Escherichia coli str. K-12 substr.
DH10B]
gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638]
gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11]
gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22]
gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019]
gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171]
gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1]
gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4024]
gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4206]
gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4045]
gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4042]
gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4115]
gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11]
gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
TW14588]
gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469]
gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1]
gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88]
gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989]
gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39]
gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026]
gi|222156005|ref|YP_002556144.1| Peptide chain release factor 1 [Escherichia coli LF82]
gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972]
gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
gi|238900442|ref|YP_002926238.1| peptide chain release factor 1 [Escherichia coli BW2952]
gi|251784717|ref|YP_002999021.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
gi|254288101|ref|YP_003053849.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
TW14359]
gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
12009]
gi|260854872|ref|YP_003228763.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
11368]
gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
11128]
gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
FRIK966]
gi|291282236|ref|YP_003499054.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
CB9615]
gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354]
gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185]
gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088]
gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101]
gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W]
gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70]
gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736]
gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605]
gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143]
gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271]
gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591]
gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299]
gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9]
gi|378713413|ref|YP_005278306.1| peptide chain release factor 1 [Escherichia coli KO11FL]
gi|383178861|ref|YP_005456866.1| peptide chain release factor 1 [Shigella sonnei 53G]
gi|384542850|ref|YP_005726912.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
gi|386595965|ref|YP_006092365.1| peptide chain release factor 1 [Escherichia coli DH1]
gi|386599060|ref|YP_006100566.1| peptide chain release factor 1 [Escherichia coli IHE3034]
gi|386604782|ref|YP_006111082.1| peptide chain release factor 1 [Escherichia coli UM146]
gi|386608545|ref|YP_006124031.1| peptide chain release factor RF-1 [Escherichia coli W]
gi|386618895|ref|YP_006138475.1| Peptide chain release factor 1 [Escherichia coli NA114]
gi|386623756|ref|YP_006143484.1| peptide chain release factor RF-1 [Escherichia coli O7:K1 str.
CE10]
gi|386628981|ref|YP_006148701.1| peptide chain release factor 1 [Escherichia coli str. 'clone D i2']
gi|386633901|ref|YP_006153620.1| peptide chain release factor 1 [Escherichia coli str. 'clone D
i14']
gi|386638774|ref|YP_006105572.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
gi|386701837|ref|YP_006165674.1| peptide chain release factor 1 [Escherichia coli KO11FL]
gi|386705096|ref|YP_006168943.1| Peptide chain release factor 1 [Escherichia coli P12b]
gi|386709000|ref|YP_006172721.1| peptide chain release factor 1 [Escherichia coli W]
gi|387506343|ref|YP_006158599.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
RM12579]
gi|387606723|ref|YP_006095579.1| peptide chain release factor 1 [Escherichia coli 042]
gi|387611774|ref|YP_006114890.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
gi|387616580|ref|YP_006119602.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
857C]
gi|387620924|ref|YP_006128551.1| peptide chain release factor 1 [Escherichia coli DH1]
gi|387829240|ref|YP_003349177.1| peptide chain release factor 1 [Escherichia coli SE15]
gi|387882209|ref|YP_006312511.1| peptide chain release factor 1 [Escherichia coli Xuzhou21]
gi|388477290|ref|YP_489478.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
substr. W3110]
gi|404374572|ref|ZP_10979783.1| peptide chain release factor 1 [Escherichia sp. 1_1_43]
gi|407468881|ref|YP_006784677.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482452|ref|YP_006779601.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483004|ref|YP_006770550.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414576434|ref|ZP_11433620.1| peptide chain release factor 1 [Shigella sonnei 3233-85]
gi|415777949|ref|ZP_11489059.1| peptide chain release factor 1 [Escherichia coli 3431]
gi|415790770|ref|ZP_11495255.1| peptide chain release factor 1 [Escherichia coli EPECa14]
gi|415796820|ref|ZP_11497815.1| peptide chain release factor 1 [Escherichia coli E128010]
gi|415819910|ref|ZP_11509207.1| peptide chain release factor 1 [Escherichia coli OK1180]
gi|415827149|ref|ZP_11514066.1| peptide chain release factor 1 [Escherichia coli OK1357]
gi|415844902|ref|ZP_11524606.1| peptide chain release factor 1 [Shigella sonnei 53G]
gi|415856028|ref|ZP_11531080.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
gi|416280675|ref|ZP_11645480.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
gi|416311601|ref|ZP_11657148.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
gi|416323614|ref|ZP_11664991.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC1212]
gi|416325140|ref|ZP_11665608.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
gi|416336161|ref|ZP_11672809.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
gi|416344499|ref|ZP_11678354.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
gi|416782381|ref|ZP_11877811.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
G5101]
gi|416793571|ref|ZP_11882732.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
493-89]
gi|416805033|ref|ZP_11887584.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
2687]
gi|416815958|ref|ZP_11892296.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
3256-97]
gi|416825774|ref|ZP_11896883.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
5905]
gi|416836539|ref|ZP_11902154.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
LSU-61]
gi|417083912|ref|ZP_11951817.1| peptide chain release factor 1 [Escherichia coli cloneA_i1]
gi|417134897|ref|ZP_11979682.1| peptide chain release factor 1 [Escherichia coli 5.0588]
gi|417137163|ref|ZP_11980953.1| peptide chain release factor 1 [Escherichia coli 97.0259]
gi|417143812|ref|ZP_11985774.1| peptide chain release factor 1 [Escherichia coli 1.2264]
gi|417154593|ref|ZP_11992722.1| peptide chain release factor 1 [Escherichia coli 96.0497]
gi|417158985|ref|ZP_11996343.1| peptide chain release factor 1 [Escherichia coli 99.0741]
gi|417172404|ref|ZP_12002437.1| peptide chain release factor 1 [Escherichia coli 3.2608]
gi|417180271|ref|ZP_12007979.1| peptide chain release factor 1 [Escherichia coli 93.0624]
gi|417200718|ref|ZP_12017511.1| peptide chain release factor 1 [Escherichia coli 4.0522]
gi|417205603|ref|ZP_12019101.1| peptide chain release factor 1 [Escherichia coli JB1-95]
gi|417225064|ref|ZP_12028355.1| peptide chain release factor 1 [Escherichia coli 96.154]
gi|417236795|ref|ZP_12034947.1| peptide chain release factor 1 [Escherichia coli 9.0111]
gi|417254186|ref|ZP_12045942.1| peptide chain release factor 1 [Escherichia coli 4.0967]
gi|417260381|ref|ZP_12047882.1| peptide chain release factor 1 [Escherichia coli 2.3916]
gi|417266575|ref|ZP_12053943.1| peptide chain release factor 1 [Escherichia coli 3.3884]
gi|417274364|ref|ZP_12061704.1| peptide chain release factor 1 [Escherichia coli 2.4168]
gi|417278642|ref|ZP_12065957.1| peptide chain release factor 1 [Escherichia coli 3.2303]
gi|417288629|ref|ZP_12075914.1| peptide chain release factor 1 [Escherichia coli TW07793]
gi|417289653|ref|ZP_12076936.1| peptide chain release factor 1 [Escherichia coli B41]
gi|417297777|ref|ZP_12085021.1| peptide chain release factor 1 [Escherichia coli 900105 (10e)]
gi|417307703|ref|ZP_12094565.1| Peptide chain release factor 1 [Escherichia coli PCN033]
gi|417580528|ref|ZP_12231344.1| peptide chain release factor 1 [Escherichia coli STEC_B2F1]
gi|417586136|ref|ZP_12236909.1| peptide chain release factor 1 [Escherichia coli STEC_C165-02]
gi|417591121|ref|ZP_12241830.1| peptide chain release factor 1 [Escherichia coli 2534-86]
gi|417601673|ref|ZP_12252251.1| peptide chain release factor 1 [Escherichia coli STEC_94C]
gi|417607561|ref|ZP_12258073.1| peptide chain release factor 1 [Escherichia coli STEC_DG131-3]
gi|417612485|ref|ZP_12262953.1| peptide chain release factor 1 [Escherichia coli STEC_EH250]
gi|417617670|ref|ZP_12268098.1| peptide chain release factor 1 [Escherichia coli G58-1]
gi|417622817|ref|ZP_12273131.1| peptide chain release factor 1 [Escherichia coli STEC_H.1.8]
gi|417628323|ref|ZP_12278566.1| peptide chain release factor 1 [Escherichia coli STEC_MHI813]
gi|417634003|ref|ZP_12284219.1| peptide chain release factor 1 [Escherichia coli STEC_S1191]
gi|417639088|ref|ZP_12289243.1| peptide chain release factor 1 [Escherichia coli TX1999]
gi|417661858|ref|ZP_12311439.1| peptide chain release factor 1 [Escherichia coli AA86]
gi|417666472|ref|ZP_12316027.1| peptide chain release factor 1 [Escherichia coli STEC_O31]
gi|417670814|ref|ZP_12320316.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
gi|417689131|ref|ZP_12338367.1| peptide chain release factor 1 [Shigella boydii 5216-82]
gi|417701385|ref|ZP_12350510.1| peptide chain release factor 1 [Shigella flexneri K-218]
gi|417706958|ref|ZP_12356007.1| peptide chain release factor 1 [Shigella flexneri VA-6]
gi|417712085|ref|ZP_12361079.1| peptide chain release factor 1 [Shigella flexneri K-272]
gi|417716671|ref|ZP_12365599.1| peptide chain release factor 1 [Shigella flexneri K-227]
gi|417722520|ref|ZP_12371344.1| peptide chain release factor 1 [Shigella flexneri K-304]
gi|417727873|ref|ZP_12376599.1| peptide chain release factor 1 [Shigella flexneri K-671]
gi|417733027|ref|ZP_12381690.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
gi|417738222|ref|ZP_12386815.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
gi|417742865|ref|ZP_12391407.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
gi|417804649|ref|ZP_12451652.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
LB226692]
gi|417832390|ref|ZP_12478878.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
01-09591]
gi|417864875|ref|ZP_12509920.1| hypothetical protein C22711_1807 [Escherichia coli O104:H4 str.
C227-11]
gi|417944328|ref|ZP_12587571.1| peptide chain release factor 1 [Escherichia coli XH140A]
gi|417976193|ref|ZP_12616988.1| peptide chain release factor 1 [Escherichia coli XH001]
gi|418043387|ref|ZP_12681552.1| peptide chain release factor 1 [Escherichia coli W26]
gi|418255196|ref|ZP_12879648.1| peptide chain release factor 1 [Shigella flexneri 6603-63]
gi|418266196|ref|ZP_12885772.1| peptide chain release factor 1 [Shigella sonnei str. Moseley]
gi|418302401|ref|ZP_12914195.1| peptide chain release factor 1 [Escherichia coli UMNF18]
gi|418941623|ref|ZP_13494944.1| peptide chain release factor 1 [Escherichia coli O157:H43 str. T22]
gi|418958456|ref|ZP_13510370.1| peptide chain release factor 1 [Escherichia coli J53]
gi|419044802|ref|ZP_13591763.1| peptide chain release factor 1 [Escherichia coli DEC3A]
gi|419050387|ref|ZP_13597285.1| peptide chain release factor 1 [Escherichia coli DEC3B]
gi|419056558|ref|ZP_13603390.1| peptide chain release factor 1 [Escherichia coli DEC3C]
gi|419061961|ref|ZP_13608719.1| peptide chain release factor 1 [Escherichia coli DEC3D]
gi|419068634|ref|ZP_13614477.1| peptide chain release factor 1 [Escherichia coli DEC3E]
gi|419074723|ref|ZP_13620273.1| peptide chain release factor 1 [Escherichia coli DEC3F]
gi|419091686|ref|ZP_13636995.1| peptide chain release factor 1 [Escherichia coli DEC4C]
gi|419097660|ref|ZP_13642888.1| peptide chain release factor 1 [Escherichia coli DEC4D]
gi|419103428|ref|ZP_13648582.1| peptide chain release factor 1 [Escherichia coli DEC4E]
gi|419108857|ref|ZP_13653944.1| peptide chain release factor 1 [Escherichia coli DEC4F]
gi|419114183|ref|ZP_13659212.1| peptide chain release factor 1 [Escherichia coli DEC5A]
gi|419119827|ref|ZP_13664805.1| peptide chain release factor 1 [Escherichia coli DEC5B]
gi|419125501|ref|ZP_13670396.1| peptide chain release factor 1 [Escherichia coli DEC5C]
gi|419131048|ref|ZP_13675895.1| peptide chain release factor 1 [Escherichia coli DEC5D]
gi|419135941|ref|ZP_13680744.1| peptide chain release factor 1 [Escherichia coli DEC5E]
gi|419141844|ref|ZP_13686592.1| peptide chain release factor 1 [Escherichia coli DEC6A]
gi|419158587|ref|ZP_13703101.1| peptide chain release factor 1 [Escherichia coli DEC6D]
gi|419163683|ref|ZP_13708147.1| peptide chain release factor 1 [Escherichia coli DEC6E]
gi|419169251|ref|ZP_13713644.1| peptide chain release factor 1 [Escherichia coli DEC7A]
gi|419174703|ref|ZP_13718552.1| peptide chain release factor 1 [Escherichia coli DEC7B]
gi|419180276|ref|ZP_13723897.1| peptide chain release factor 1 [Escherichia coli DEC7C]
gi|419185790|ref|ZP_13729311.1| peptide chain release factor 1 [Escherichia coli DEC7D]
gi|419191060|ref|ZP_13734526.1| peptide chain release factor 1 [Escherichia coli DEC7E]
gi|419196405|ref|ZP_13739804.1| peptide chain release factor 1 [Escherichia coli DEC8A]
gi|419202608|ref|ZP_13745816.1| peptide chain release factor 1 [Escherichia coli DEC8B]
gi|419208805|ref|ZP_13751912.1| peptide chain release factor 1 [Escherichia coli DEC8C]
gi|419215032|ref|ZP_13758050.1| peptide chain release factor 1 [Escherichia coli DEC8D]
gi|419220717|ref|ZP_13763663.1| peptide chain release factor 1 [Escherichia coli DEC8E]
gi|419226201|ref|ZP_13769072.1| peptide chain release factor 1 [Escherichia coli DEC9A]
gi|419231802|ref|ZP_13774588.1| peptide chain release factor 1 [Escherichia coli DEC9B]
gi|419242738|ref|ZP_13785384.1| peptide chain release factor 1 [Escherichia coli DEC9D]
gi|419248485|ref|ZP_13791082.1| peptide chain release factor 1 [Escherichia coli DEC9E]
gi|419254355|ref|ZP_13796883.1| peptide chain release factor 1 [Escherichia coli DEC10A]
gi|419266498|ref|ZP_13808866.1| peptide chain release factor 1 [Escherichia coli DEC10C]
gi|419271988|ref|ZP_13814298.1| peptide chain release factor 1 [Escherichia coli DEC10D]
gi|419277486|ref|ZP_13819747.1| peptide chain release factor 1 [Escherichia coli DEC10E]
gi|419289036|ref|ZP_13831135.1| peptide chain release factor 1 [Escherichia coli DEC11A]
gi|419294309|ref|ZP_13836357.1| peptide chain release factor 1 [Escherichia coli DEC11B]
gi|419299660|ref|ZP_13841669.1| peptide chain release factor 1 [Escherichia coli DEC11C]
gi|419305852|ref|ZP_13847760.1| peptide chain release factor 1 [Escherichia coli DEC11D]
gi|419310875|ref|ZP_13852745.1| peptide chain release factor 1 [Escherichia coli DEC11E]
gi|419316194|ref|ZP_13858014.1| peptide chain release factor 1 [Escherichia coli DEC12A]
gi|419322204|ref|ZP_13863927.1| peptide chain release factor 1 [Escherichia coli DEC12B]
gi|419328278|ref|ZP_13869904.1| peptide chain release factor 1 [Escherichia coli DEC12C]
gi|419333945|ref|ZP_13875489.1| peptide chain release factor 1 [Escherichia coli DEC12D]
gi|419339147|ref|ZP_13880630.1| peptide chain release factor 1 [Escherichia coli DEC12E]
gi|419344829|ref|ZP_13886211.1| peptide chain release factor 1 [Escherichia coli DEC13A]
gi|419349267|ref|ZP_13890620.1| peptide chain release factor 1 [Escherichia coli DEC13B]
gi|419354429|ref|ZP_13895702.1| peptide chain release factor 1 [Escherichia coli DEC13C]
gi|419359655|ref|ZP_13900879.1| peptide chain release factor 1 [Escherichia coli DEC13D]
gi|419364742|ref|ZP_13905914.1| peptide chain release factor 1 [Escherichia coli DEC13E]
gi|419369522|ref|ZP_13910648.1| peptide chain release factor 1 [Escherichia coli DEC14A]
gi|419375068|ref|ZP_13916104.1| peptide chain release factor 1 [Escherichia coli DEC14B]
gi|419385614|ref|ZP_13926500.1| peptide chain release factor 1 [Escherichia coli DEC14D]
gi|419391005|ref|ZP_13931828.1| peptide chain release factor 1 [Escherichia coli DEC15A]
gi|419396068|ref|ZP_13936847.1| peptide chain release factor 1 [Escherichia coli DEC15B]
gi|419406634|ref|ZP_13947326.1| peptide chain release factor 1 [Escherichia coli DEC15D]
gi|419412137|ref|ZP_13952800.1| peptide chain release factor 1 [Escherichia coli DEC15E]
gi|419700095|ref|ZP_14227705.1| peptide chain release factor 1 [Escherichia coli SCI-07]
gi|419807327|ref|ZP_14332390.1| peptide chain release factor 1 [Escherichia coli AI27]
gi|419813264|ref|ZP_14338116.1| peptide chain release factor 1 [Escherichia coli O32:H37 str. P4]
gi|419867318|ref|ZP_14389645.1| peptide chain release factor 1 [Escherichia coli O103:H25 str.
CVM9340]
gi|419870819|ref|ZP_14392900.1| peptide chain release factor 1 [Escherichia coli O103:H2 str.
CVM9450]
gi|419876657|ref|ZP_14398360.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9534]
gi|419879571|ref|ZP_14401003.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9545]
gi|419890148|ref|ZP_14410455.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9570]
gi|419894417|ref|ZP_14414324.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9574]
gi|419903303|ref|ZP_14422396.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM9942]
gi|419906265|ref|ZP_14425186.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10026]
gi|419915012|ref|ZP_14433390.1| peptide chain release factor 1 [Escherichia coli KD1]
gi|419918341|ref|ZP_14436545.1| peptide chain release factor 1 [Escherichia coli KD2]
gi|419928333|ref|ZP_14446047.1| peptide chain release factor 1 [Escherichia coli 541-1]
gi|419933437|ref|ZP_14450671.1| peptide chain release factor 1 [Escherichia coli 576-1]
gi|419940625|ref|ZP_14457351.1| peptide chain release factor 1 [Escherichia coli 75]
gi|419943625|ref|ZP_14460146.1| peptide chain release factor 1 [Escherichia coli HM605]
gi|419951740|ref|ZP_14467924.1| peptide chain release factor 1 [Escherichia coli CUMT8]
gi|420089965|ref|ZP_14601743.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9602]
gi|420095381|ref|ZP_14606894.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9634]
gi|420101353|ref|ZP_14612463.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9455]
gi|420108281|ref|ZP_14618558.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9553]
gi|420117486|ref|ZP_14626845.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10021]
gi|420121584|ref|ZP_14630671.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10030]
gi|420124847|ref|ZP_14633693.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10224]
gi|420135933|ref|ZP_14644005.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM9952]
gi|420268899|ref|ZP_14771289.1| peptide chain release factor 1 [Escherichia coli PA22]
gi|420274805|ref|ZP_14777118.1| peptide chain release factor 1 [Escherichia coli PA40]
gi|420279835|ref|ZP_14782093.1| peptide chain release factor 1 [Escherichia coli TW06591]
gi|420285936|ref|ZP_14788145.1| peptide chain release factor 1 [Escherichia coli TW10246]
gi|420291788|ref|ZP_14793937.1| peptide chain release factor 1 [Escherichia coli TW11039]
gi|420297509|ref|ZP_14799584.1| peptide chain release factor 1 [Escherichia coli TW09109]
gi|420303551|ref|ZP_14805566.1| peptide chain release factor 1 [Escherichia coli TW10119]
gi|420308977|ref|ZP_14810934.1| peptide chain release factor 1 [Escherichia coli EC1738]
gi|420313720|ref|ZP_14815626.1| peptide chain release factor 1 [Escherichia coli EC1734]
gi|420319840|ref|ZP_14821682.1| peptide chain release factor 1 [Shigella flexneri 2850-71]
gi|420330571|ref|ZP_14832254.1| peptide chain release factor 1 [Shigella flexneri K-1770]
gi|420346448|ref|ZP_14847865.1| peptide chain release factor 1 [Shigella boydii 965-58]
gi|420358967|ref|ZP_14859943.1| peptide chain release factor 1 [Shigella sonnei 3226-85]
gi|420363695|ref|ZP_14864583.1| peptide chain release factor 1 [Shigella sonnei 4822-66]
gi|420385121|ref|ZP_14884489.1| peptide chain release factor 1 [Escherichia coli EPECa12]
gi|421776527|ref|ZP_16213131.1| peptide chain release factor 1 [Escherichia coli AD30]
gi|421811705|ref|ZP_16247475.1| peptide chain release factor 1 [Escherichia coli 8.0416]
gi|421817824|ref|ZP_16253361.1| peptide chain release factor 1 [Escherichia coli 10.0821]
gi|421823393|ref|ZP_16258808.1| peptide chain release factor 1 [Escherichia coli FRIK920]
gi|421830190|ref|ZP_16265506.1| peptide chain release factor 1 [Escherichia coli PA7]
gi|422354444|ref|ZP_16435179.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
gi|422357589|ref|ZP_16438255.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
gi|422366574|ref|ZP_16447039.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
gi|422370927|ref|ZP_16451312.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
gi|422372928|ref|ZP_16453263.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
gi|422382771|ref|ZP_16462926.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
gi|422751712|ref|ZP_16805620.1| peptide chain release [Escherichia coli H252]
gi|422757637|ref|ZP_16811454.1| peptide chain release [Escherichia coli H263]
gi|422762746|ref|ZP_16816502.1| peptide chain release [Escherichia coli E1167]
gi|422765758|ref|ZP_16819485.1| peptide chain release 1 [Escherichia coli E1520]
gi|422770425|ref|ZP_16824116.1| peptide chain release [Escherichia coli E482]
gi|422774925|ref|ZP_16828581.1| peptide chain release 1 [Escherichia coli H120]
gi|422781979|ref|ZP_16834764.1| peptide chain release [Escherichia coli TW10509]
gi|422785774|ref|ZP_16838513.1| peptide chain release [Escherichia coli H489]
gi|422790115|ref|ZP_16842820.1| peptide chain release [Escherichia coli TA007]
gi|422817469|ref|ZP_16865683.1| peptide chain release factor 1 [Escherichia coli M919]
gi|422831581|ref|ZP_16879722.1| peptide chain release factor 1 [Escherichia coli B093]
gi|422836319|ref|ZP_16884366.1| peptide chain release factor 1 [Escherichia coli E101]
gi|422839721|ref|ZP_16887693.1| peptide chain release factor 1 [Escherichia coli H397]
gi|422958628|ref|ZP_16970559.1| peptide chain release factor 1 [Escherichia coli H494]
gi|422971136|ref|ZP_16974648.1| peptide chain release factor 1 [Escherichia coli TA124]
gi|422992072|ref|ZP_16982843.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
C227-11]
gi|422994022|ref|ZP_16984786.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
C236-11]
gi|422999201|ref|ZP_16989957.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
09-7901]
gi|423002800|ref|ZP_16993546.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
04-8351]
gi|423009336|ref|ZP_17000074.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-3677]
gi|423023528|ref|ZP_17014231.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4404]
gi|423028676|ref|ZP_17019369.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4522]
gi|423029542|ref|ZP_17020230.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4623]
gi|423037381|ref|ZP_17028055.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423042496|ref|ZP_17033163.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423049187|ref|ZP_17039844.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423052768|ref|ZP_17041576.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423059736|ref|ZP_17048532.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423688809|ref|ZP_17663487.1| peptide chain release factor 1 [Escherichia coli PA31]
gi|423702034|ref|ZP_17676493.1| peptide chain release factor 1 [Escherichia coli H730]
gi|423709195|ref|ZP_17683573.1| peptide chain release factor 1 [Escherichia coli B799]
gi|424076720|ref|ZP_17813912.1| peptide chain release factor 1 [Escherichia coli FDA505]
gi|424083086|ref|ZP_17819782.1| peptide chain release factor 1 [Escherichia coli FDA517]
gi|424089600|ref|ZP_17825726.1| peptide chain release factor 1 [Escherichia coli FRIK1996]
gi|424095969|ref|ZP_17831545.1| peptide chain release factor 1 [Escherichia coli FRIK1985]
gi|424102332|ref|ZP_17837335.1| peptide chain release factor 1 [Escherichia coli FRIK1990]
gi|424109133|ref|ZP_17843558.1| peptide chain release factor 1 [Escherichia coli 93-001]
gi|424114872|ref|ZP_17848904.1| peptide chain release factor 1 [Escherichia coli PA3]
gi|424121160|ref|ZP_17854706.1| peptide chain release factor 1 [Escherichia coli PA5]
gi|424127333|ref|ZP_17860409.1| peptide chain release factor 1 [Escherichia coli PA9]
gi|424133472|ref|ZP_17866133.1| peptide chain release factor 1 [Escherichia coli PA10]
gi|424140099|ref|ZP_17872213.1| peptide chain release factor 1 [Escherichia coli PA14]
gi|424146557|ref|ZP_17878140.1| peptide chain release factor 1 [Escherichia coli PA15]
gi|424152568|ref|ZP_17883673.1| peptide chain release factor 1 [Escherichia coli PA24]
gi|424213832|ref|ZP_17889123.1| peptide chain release factor 1 [Escherichia coli PA25]
gi|424292632|ref|ZP_17895038.1| peptide chain release factor 1 [Escherichia coli PA28]
gi|424438908|ref|ZP_17900809.1| peptide chain release factor 1 [Escherichia coli PA32]
gi|424455049|ref|ZP_17906419.1| peptide chain release factor 1 [Escherichia coli PA33]
gi|424461391|ref|ZP_17912115.1| peptide chain release factor 1 [Escherichia coli PA39]
gi|424467837|ref|ZP_17917865.1| peptide chain release factor 1 [Escherichia coli PA41]
gi|424474390|ref|ZP_17923911.1| peptide chain release factor 1 [Escherichia coli PA42]
gi|424480232|ref|ZP_17929364.1| peptide chain release factor 1 [Escherichia coli TW07945]
gi|424486347|ref|ZP_17935072.1| peptide chain release factor 1 [Escherichia coli TW09098]
gi|424492648|ref|ZP_17940747.1| peptide chain release factor 1 [Escherichia coli TW09195]
gi|424499553|ref|ZP_17946688.1| peptide chain release factor 1 [Escherichia coli EC4203]
gi|424505713|ref|ZP_17952350.1| peptide chain release factor 1 [Escherichia coli EC4196]
gi|424512101|ref|ZP_17958139.1| peptide chain release factor 1 [Escherichia coli TW14313]
gi|424519576|ref|ZP_17963871.1| peptide chain release factor 1 [Escherichia coli TW14301]
gi|424525470|ref|ZP_17969360.1| peptide chain release factor 1 [Escherichia coli EC4421]
gi|424531647|ref|ZP_17975153.1| peptide chain release factor 1 [Escherichia coli EC4422]
gi|424537608|ref|ZP_17980727.1| peptide chain release factor 1 [Escherichia coli EC4013]
gi|424543566|ref|ZP_17986213.1| peptide chain release factor 1 [Escherichia coli EC4402]
gi|424549867|ref|ZP_17991921.1| peptide chain release factor 1 [Escherichia coli EC4439]
gi|424556110|ref|ZP_17997692.1| peptide chain release factor 1 [Escherichia coli EC4436]
gi|424562465|ref|ZP_18003619.1| peptide chain release factor 1 [Escherichia coli EC4437]
gi|424568520|ref|ZP_18009283.1| peptide chain release factor 1 [Escherichia coli EC4448]
gi|424574664|ref|ZP_18014944.1| peptide chain release factor 1 [Escherichia coli EC1845]
gi|424580579|ref|ZP_18020392.1| peptide chain release factor 1 [Escherichia coli EC1863]
gi|424748890|ref|ZP_18177017.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756323|ref|ZP_18184147.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768742|ref|ZP_18196001.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424816493|ref|ZP_18241644.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
gi|424837660|ref|ZP_18262297.1| peptide chain release factor 1 [Shigella flexneri 5a str. M90T]
gi|425097294|ref|ZP_18500195.1| peptide chain release factor 1 [Escherichia coli 3.4870]
gi|425103484|ref|ZP_18505977.1| peptide chain release factor 1 [Escherichia coli 5.2239]
gi|425109314|ref|ZP_18511428.1| peptide chain release factor 1 [Escherichia coli 6.0172]
gi|425114583|ref|ZP_18516399.1| peptide chain release factor 1 [Escherichia coli 8.0566]
gi|425119298|ref|ZP_18521011.1| peptide chain release factor 1 [Escherichia coli 8.0569]
gi|425125097|ref|ZP_18526499.1| peptide chain release factor 1 [Escherichia coli 8.0586]
gi|425131088|ref|ZP_18532066.1| peptide chain release factor 1 [Escherichia coli 8.2524]
gi|425139596|ref|ZP_18539978.1| peptide chain release factor 1 [Escherichia coli 10.0833]
gi|425143484|ref|ZP_18543609.1| peptide chain release factor 1 [Escherichia coli 10.0869]
gi|425149449|ref|ZP_18549219.1| peptide chain release factor 1 [Escherichia coli 88.0221]
gi|425155234|ref|ZP_18554661.1| peptide chain release factor 1 [Escherichia coli PA34]
gi|425161749|ref|ZP_18560791.1| peptide chain release factor 1 [Escherichia coli FDA506]
gi|425167352|ref|ZP_18566022.1| peptide chain release factor 1 [Escherichia coli FDA507]
gi|425173505|ref|ZP_18571783.1| peptide chain release factor 1 [Escherichia coli FDA504]
gi|425179413|ref|ZP_18577327.1| peptide chain release factor 1 [Escherichia coli FRIK1999]
gi|425185655|ref|ZP_18583132.1| peptide chain release factor 1 [Escherichia coli FRIK1997]
gi|425192439|ref|ZP_18589427.1| peptide chain release factor 1 [Escherichia coli NE1487]
gi|425198779|ref|ZP_18595272.1| peptide chain release factor 1 [Escherichia coli NE037]
gi|425205384|ref|ZP_18601381.1| peptide chain release factor 1 [Escherichia coli FRIK2001]
gi|425211097|ref|ZP_18606699.1| peptide chain release factor 1 [Escherichia coli PA4]
gi|425217212|ref|ZP_18612382.1| peptide chain release factor 1 [Escherichia coli PA23]
gi|425223752|ref|ZP_18618446.1| peptide chain release factor 1 [Escherichia coli PA49]
gi|425229945|ref|ZP_18624205.1| peptide chain release factor 1 [Escherichia coli PA45]
gi|425236160|ref|ZP_18630013.1| peptide chain release factor 1 [Escherichia coli TT12B]
gi|425242232|ref|ZP_18635729.1| peptide chain release factor 1 [Escherichia coli MA6]
gi|425248255|ref|ZP_18641334.1| peptide chain release factor 1 [Escherichia coli 5905]
gi|425254106|ref|ZP_18646828.1| peptide chain release factor 1 [Escherichia coli CB7326]
gi|425260330|ref|ZP_18652569.1| peptide chain release factor 1 [Escherichia coli EC96038]
gi|425266490|ref|ZP_18658269.1| peptide chain release factor 1 [Escherichia coli 5412]
gi|425272248|ref|ZP_18663712.1| peptide chain release factor 1 [Escherichia coli TW15901]
gi|425282798|ref|ZP_18673872.1| peptide chain release factor 1 [Escherichia coli TW00353]
gi|425288023|ref|ZP_18678912.1| peptide chain release factor 1 [Escherichia coli 3006]
gi|425293970|ref|ZP_18684380.1| peptide chain release factor 1 [Escherichia coli PA38]
gi|425310644|ref|ZP_18699980.1| peptide chain release factor 1 [Escherichia coli EC1735]
gi|425316564|ref|ZP_18705508.1| peptide chain release factor 1 [Escherichia coli EC1736]
gi|425322681|ref|ZP_18711201.1| peptide chain release factor 1 [Escherichia coli EC1737]
gi|425328867|ref|ZP_18716936.1| peptide chain release factor 1 [Escherichia coli EC1846]
gi|425335035|ref|ZP_18722611.1| peptide chain release factor 1 [Escherichia coli EC1847]
gi|425341454|ref|ZP_18728535.1| peptide chain release factor 1 [Escherichia coli EC1848]
gi|425347298|ref|ZP_18733967.1| peptide chain release factor 1 [Escherichia coli EC1849]
gi|425353538|ref|ZP_18739783.1| peptide chain release factor 1 [Escherichia coli EC1850]
gi|425359525|ref|ZP_18745360.1| peptide chain release factor 1 [Escherichia coli EC1856]
gi|425365670|ref|ZP_18751054.1| peptide chain release factor 1 [Escherichia coli EC1862]
gi|425372105|ref|ZP_18756921.1| peptide chain release factor 1 [Escherichia coli EC1864]
gi|425378604|ref|ZP_18762838.1| peptide chain release factor 1 [Escherichia coli EC1865]
gi|425384910|ref|ZP_18768645.1| peptide chain release factor 1 [Escherichia coli EC1866]
gi|425391610|ref|ZP_18774917.1| peptide chain release factor 1 [Escherichia coli EC1868]
gi|425397728|ref|ZP_18780621.1| peptide chain release factor 1 [Escherichia coli EC1869]
gi|425403716|ref|ZP_18786166.1| peptide chain release factor 1 [Escherichia coli EC1870]
gi|425410250|ref|ZP_18792242.1| peptide chain release factor 1 [Escherichia coli NE098]
gi|425416563|ref|ZP_18798032.1| peptide chain release factor 1 [Escherichia coli FRIK523]
gi|425421891|ref|ZP_18803084.1| peptide chain release factor 1 [Escherichia coli 0.1288]
gi|425427707|ref|ZP_18808588.1| peptide chain release factor 1 [Escherichia coli 0.1304]
gi|427804347|ref|ZP_18971414.1| peptide chain release factor RF-1 [Escherichia coli chi7122]
gi|427808931|ref|ZP_18975996.1| peptide chain release factor RF-1 [Escherichia coli]
gi|428946263|ref|ZP_19018753.1| peptide chain release factor 1 [Escherichia coli 88.1467]
gi|428952466|ref|ZP_19024438.1| peptide chain release factor 1 [Escherichia coli 88.1042]
gi|428959010|ref|ZP_19030392.1| peptide chain release factor 1 [Escherichia coli 89.0511]
gi|428964784|ref|ZP_19035784.1| peptide chain release factor 1 [Escherichia coli 90.0091]
gi|428970752|ref|ZP_19041250.1| peptide chain release factor 1 [Escherichia coli 90.0039]
gi|428977914|ref|ZP_19047806.1| peptide chain release factor 1 [Escherichia coli 90.2281]
gi|428983636|ref|ZP_19053094.1| peptide chain release factor 1 [Escherichia coli 93.0055]
gi|428989276|ref|ZP_19058414.1| peptide chain release factor 1 [Escherichia coli 93.0056]
gi|428995029|ref|ZP_19063810.1| peptide chain release factor 1 [Escherichia coli 94.0618]
gi|429001239|ref|ZP_19069582.1| peptide chain release factor 1 [Escherichia coli 95.0183]
gi|429007381|ref|ZP_19075110.1| peptide chain release factor 1 [Escherichia coli 95.1288]
gi|429013815|ref|ZP_19080898.1| peptide chain release factor 1 [Escherichia coli 95.0943]
gi|429019816|ref|ZP_19086477.1| peptide chain release factor 1 [Escherichia coli 96.0428]
gi|429025688|ref|ZP_19091928.1| peptide chain release factor 1 [Escherichia coli 96.0427]
gi|429031855|ref|ZP_19097577.1| peptide chain release factor 1 [Escherichia coli 96.0939]
gi|429038024|ref|ZP_19103319.1| peptide chain release factor 1 [Escherichia coli 96.0932]
gi|429043980|ref|ZP_19108846.1| peptide chain release factor 1 [Escherichia coli 96.0107]
gi|429049624|ref|ZP_19114254.1| peptide chain release factor 1 [Escherichia coli 97.0003]
gi|429054928|ref|ZP_19119362.1| peptide chain release factor 1 [Escherichia coli 97.1742]
gi|429060621|ref|ZP_19124716.1| peptide chain release factor 1 [Escherichia coli 97.0007]
gi|429066440|ref|ZP_19130122.1| peptide chain release factor 1 [Escherichia coli 99.0672]
gi|429072651|ref|ZP_19135967.1| peptide chain release factor 1 [Escherichia coli 99.0678]
gi|429078017|ref|ZP_19141201.1| peptide chain release factor 1 [Escherichia coli 99.0713]
gi|429723585|ref|ZP_19258467.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429723929|ref|ZP_19258804.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429773664|ref|ZP_19305677.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02030]
gi|429776654|ref|ZP_19308634.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429781878|ref|ZP_19313805.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02092]
gi|429787072|ref|ZP_19318963.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02093]
gi|429792251|ref|ZP_19324103.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02281]
gi|429797464|ref|ZP_19329269.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02318]
gi|429802669|ref|ZP_19334430.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02913]
gi|429809040|ref|ZP_19340752.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-03439]
gi|429813092|ref|ZP_19344772.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-04080]
gi|429818298|ref|ZP_19349934.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-03943]
gi|429825597|ref|ZP_19356885.1| peptide chain release factor 1 [Escherichia coli 96.0109]
gi|429831897|ref|ZP_19362531.1| peptide chain release factor 1 [Escherichia coli 97.0010]
gi|429912126|ref|ZP_19378082.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917968|ref|ZP_19383908.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429923006|ref|ZP_19388927.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429923857|ref|ZP_19389773.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932750|ref|ZP_19398644.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934353|ref|ZP_19400243.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940015|ref|ZP_19405889.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429947654|ref|ZP_19413509.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950287|ref|ZP_19416135.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429958560|ref|ZP_19424389.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432352345|ref|ZP_19595647.1| peptide chain release factor 1 [Escherichia coli KTE2]
gi|432357572|ref|ZP_19600809.1| peptide chain release factor 1 [Escherichia coli KTE4]
gi|432361985|ref|ZP_19605167.1| peptide chain release factor 1 [Escherichia coli KTE5]
gi|432369279|ref|ZP_19612377.1| peptide chain release factor 1 [Escherichia coli KTE10]
gi|432376351|ref|ZP_19619357.1| peptide chain release factor 1 [Escherichia coli KTE12]
gi|432380976|ref|ZP_19623924.1| peptide chain release factor 1 [Escherichia coli KTE15]
gi|432386732|ref|ZP_19629625.1| peptide chain release factor 1 [Escherichia coli KTE16]
gi|432391221|ref|ZP_19634079.1| peptide chain release factor 1 [Escherichia coli KTE21]
gi|432397113|ref|ZP_19639896.1| peptide chain release factor 1 [Escherichia coli KTE25]
gi|432401495|ref|ZP_19644248.1| peptide chain release factor 1 [Escherichia coli KTE26]
gi|432406071|ref|ZP_19648789.1| peptide chain release factor 1 [Escherichia coli KTE28]
gi|432411354|ref|ZP_19654030.1| peptide chain release factor 1 [Escherichia coli KTE39]
gi|432416241|ref|ZP_19658863.1| peptide chain release factor 1 [Escherichia coli KTE44]
gi|432421480|ref|ZP_19664030.1| peptide chain release factor 1 [Escherichia coli KTE178]
gi|432425561|ref|ZP_19668069.1| peptide chain release factor 1 [Escherichia coli KTE181]
gi|432431403|ref|ZP_19673839.1| peptide chain release factor 1 [Escherichia coli KTE187]
gi|432436535|ref|ZP_19678926.1| peptide chain release factor 1 [Escherichia coli KTE188]
gi|432440734|ref|ZP_19683077.1| peptide chain release factor 1 [Escherichia coli KTE189]
gi|432445834|ref|ZP_19688137.1| peptide chain release factor 1 [Escherichia coli KTE191]
gi|432449514|ref|ZP_19691788.1| peptide chain release factor 1 [Escherichia coli KTE193]
gi|432456235|ref|ZP_19698429.1| peptide chain release factor 1 [Escherichia coli KTE201]
gi|432460336|ref|ZP_19702488.1| peptide chain release factor 1 [Escherichia coli KTE204]
gi|432465223|ref|ZP_19707323.1| peptide chain release factor 1 [Escherichia coli KTE205]
gi|432470597|ref|ZP_19712647.1| peptide chain release factor 1 [Escherichia coli KTE206]
gi|432475356|ref|ZP_19717361.1| peptide chain release factor 1 [Escherichia coli KTE208]
gi|432480613|ref|ZP_19722574.1| peptide chain release factor 1 [Escherichia coli KTE210]
gi|432484909|ref|ZP_19726828.1| peptide chain release factor 1 [Escherichia coli KTE212]
gi|432488898|ref|ZP_19730781.1| peptide chain release factor 1 [Escherichia coli KTE213]
gi|432495153|ref|ZP_19736967.1| peptide chain release factor 1 [Escherichia coli KTE214]
gi|432499684|ref|ZP_19741447.1| peptide chain release factor 1 [Escherichia coli KTE216]
gi|432503979|ref|ZP_19745712.1| peptide chain release factor 1 [Escherichia coli KTE220]
gi|432513535|ref|ZP_19750764.1| peptide chain release factor 1 [Escherichia coli KTE224]
gi|432517296|ref|ZP_19754491.1| peptide chain release factor 1 [Escherichia coli KTE228]
gi|432523400|ref|ZP_19760534.1| peptide chain release factor 1 [Escherichia coli KTE230]
gi|432530523|ref|ZP_19767559.1| peptide chain release factor 1 [Escherichia coli KTE233]
gi|432533424|ref|ZP_19770414.1| peptide chain release factor 1 [Escherichia coli KTE234]
gi|432537393|ref|ZP_19774299.1| peptide chain release factor 1 [Escherichia coli KTE235]
gi|432553294|ref|ZP_19790023.1| peptide chain release factor 1 [Escherichia coli KTE47]
gi|432558342|ref|ZP_19795028.1| peptide chain release factor 1 [Escherichia coli KTE49]
gi|432563250|ref|ZP_19799868.1| peptide chain release factor 1 [Escherichia coli KTE51]
gi|432568244|ref|ZP_19804764.1| peptide chain release factor 1 [Escherichia coli KTE53]
gi|432573282|ref|ZP_19809770.1| peptide chain release factor 1 [Escherichia coli KTE55]
gi|432579888|ref|ZP_19816318.1| peptide chain release factor 1 [Escherichia coli KTE56]
gi|432583253|ref|ZP_19819661.1| peptide chain release factor 1 [Escherichia coli KTE57]
gi|432587521|ref|ZP_19823883.1| peptide chain release factor 1 [Escherichia coli KTE58]
gi|432592388|ref|ZP_19828714.1| peptide chain release factor 1 [Escherichia coli KTE60]
gi|432597244|ref|ZP_19833522.1| peptide chain release factor 1 [Escherichia coli KTE62]
gi|432601720|ref|ZP_19837967.1| peptide chain release factor 1 [Escherichia coli KTE66]
gi|432607120|ref|ZP_19843311.1| peptide chain release factor 1 [Escherichia coli KTE67]
gi|432611018|ref|ZP_19847183.1| peptide chain release factor 1 [Escherichia coli KTE72]
gi|432616114|ref|ZP_19852238.1| peptide chain release factor 1 [Escherichia coli KTE75]
gi|432626784|ref|ZP_19862765.1| peptide chain release factor 1 [Escherichia coli KTE77]
gi|432630874|ref|ZP_19866814.1| peptide chain release factor 1 [Escherichia coli KTE80]
gi|432636452|ref|ZP_19872334.1| peptide chain release factor 1 [Escherichia coli KTE81]
gi|432640513|ref|ZP_19876350.1| peptide chain release factor 1 [Escherichia coli KTE83]
gi|432645781|ref|ZP_19881575.1| peptide chain release factor 1 [Escherichia coli KTE86]
gi|432650686|ref|ZP_19886445.1| peptide chain release factor 1 [Escherichia coli KTE87]
gi|432655381|ref|ZP_19891090.1| peptide chain release factor 1 [Escherichia coli KTE93]
gi|432660409|ref|ZP_19896059.1| peptide chain release factor 1 [Escherichia coli KTE111]
gi|432665600|ref|ZP_19901183.1| peptide chain release factor 1 [Escherichia coli KTE116]
gi|432670136|ref|ZP_19905676.1| peptide chain release factor 1 [Escherichia coli KTE119]
gi|432674209|ref|ZP_19909694.1| peptide chain release factor 1 [Escherichia coli KTE142]
gi|432679672|ref|ZP_19915066.1| peptide chain release factor 1 [Escherichia coli KTE143]
gi|432685019|ref|ZP_19920327.1| peptide chain release factor 1 [Escherichia coli KTE156]
gi|432691112|ref|ZP_19926349.1| peptide chain release factor 1 [Escherichia coli KTE161]
gi|432694077|ref|ZP_19929286.1| peptide chain release factor 1 [Escherichia coli KTE162]
gi|432698657|ref|ZP_19933818.1| peptide chain release factor 1 [Escherichia coli KTE169]
gi|432703802|ref|ZP_19938919.1| peptide chain release factor 1 [Escherichia coli KTE171]
gi|432710239|ref|ZP_19945303.1| peptide chain release factor 1 [Escherichia coli KTE6]
gi|432713027|ref|ZP_19948070.1| peptide chain release factor 1 [Escherichia coli KTE8]
gi|432718227|ref|ZP_19953211.1| peptide chain release factor 1 [Escherichia coli KTE9]
gi|432722736|ref|ZP_19957659.1| peptide chain release factor 1 [Escherichia coli KTE17]
gi|432727324|ref|ZP_19962205.1| peptide chain release factor 1 [Escherichia coli KTE18]
gi|432732012|ref|ZP_19966847.1| peptide chain release factor 1 [Escherichia coli KTE45]
gi|432736685|ref|ZP_19971455.1| peptide chain release factor 1 [Escherichia coli KTE42]
gi|432741011|ref|ZP_19975732.1| peptide chain release factor 1 [Escherichia coli KTE23]
gi|432745268|ref|ZP_19979962.1| peptide chain release factor 1 [Escherichia coli KTE43]
gi|432749662|ref|ZP_19984274.1| peptide chain release factor 1 [Escherichia coli KTE29]
gi|432753998|ref|ZP_19988554.1| peptide chain release factor 1 [Escherichia coli KTE22]
gi|432759091|ref|ZP_19993590.1| peptide chain release factor 1 [Escherichia coli KTE46]
gi|432764555|ref|ZP_19999000.1| peptide chain release factor 1 [Escherichia coli KTE48]
gi|432770040|ref|ZP_20004392.1| peptide chain release factor 1 [Escherichia coli KTE50]
gi|432774372|ref|ZP_20008656.1| peptide chain release factor 1 [Escherichia coli KTE54]
gi|432778132|ref|ZP_20012379.1| peptide chain release factor 1 [Escherichia coli KTE59]
gi|432783184|ref|ZP_20017367.1| peptide chain release factor 1 [Escherichia coli KTE63]
gi|432786944|ref|ZP_20021086.1| peptide chain release factor 1 [Escherichia coli KTE65]
gi|432792463|ref|ZP_20026551.1| peptide chain release factor 1 [Escherichia coli KTE78]
gi|432798424|ref|ZP_20032448.1| peptide chain release factor 1 [Escherichia coli KTE79]
gi|432801494|ref|ZP_20035476.1| peptide chain release factor 1 [Escherichia coli KTE84]
gi|432805308|ref|ZP_20039249.1| peptide chain release factor 1 [Escherichia coli KTE91]
gi|432813365|ref|ZP_20047189.1| peptide chain release factor 1 [Escherichia coli KTE101]
gi|432820503|ref|ZP_20054206.1| peptide chain release factor 1 [Escherichia coli KTE118]
gi|432826659|ref|ZP_20060313.1| peptide chain release factor 1 [Escherichia coli KTE123]
gi|432831170|ref|ZP_20064751.1| peptide chain release factor 1 [Escherichia coli KTE135]
gi|432834261|ref|ZP_20067803.1| peptide chain release factor 1 [Escherichia coli KTE136]
gi|432838915|ref|ZP_20072403.1| peptide chain release factor 1 [Escherichia coli KTE140]
gi|432843919|ref|ZP_20076973.1| peptide chain release factor 1 [Escherichia coli KTE141]
gi|432849725|ref|ZP_20080868.1| peptide chain release factor 1 [Escherichia coli KTE144]
gi|432861018|ref|ZP_20086102.1| peptide chain release factor 1 [Escherichia coli KTE146]
gi|432874498|ref|ZP_20093555.1| peptide chain release factor 1 [Escherichia coli KTE147]
gi|432880910|ref|ZP_20097445.1| peptide chain release factor 1 [Escherichia coli KTE154]
gi|432886068|ref|ZP_20100263.1| peptide chain release factor 1 [Escherichia coli KTE158]
gi|432894005|ref|ZP_20105966.1| peptide chain release factor 1 [Escherichia coli KTE165]
gi|432898088|ref|ZP_20108919.1| peptide chain release factor 1 [Escherichia coli KTE192]
gi|432904164|ref|ZP_20113386.1| peptide chain release factor 1 [Escherichia coli KTE194]
gi|432912134|ref|ZP_20118084.1| peptide chain release factor 1 [Escherichia coli KTE190]
gi|432918540|ref|ZP_20122881.1| peptide chain release factor 1 [Escherichia coli KTE173]
gi|432926315|ref|ZP_20128096.1| peptide chain release factor 1 [Escherichia coli KTE175]
gi|432933746|ref|ZP_20133414.1| peptide chain release factor 1 [Escherichia coli KTE184]
gi|432937343|ref|ZP_20135846.1| peptide chain release factor 1 [Escherichia coli KTE183]
gi|432946487|ref|ZP_20142116.1| peptide chain release factor 1 [Escherichia coli KTE196]
gi|432954478|ref|ZP_20146597.1| peptide chain release factor 1 [Escherichia coli KTE197]
gi|432960768|ref|ZP_20150888.1| peptide chain release factor 1 [Escherichia coli KTE202]
gi|432967331|ref|ZP_20156247.1| peptide chain release factor 1 [Escherichia coli KTE203]
gi|432971453|ref|ZP_20160326.1| peptide chain release factor 1 [Escherichia coli KTE207]
gi|432977908|ref|ZP_20166731.1| peptide chain release factor 1 [Escherichia coli KTE209]
gi|432980731|ref|ZP_20169509.1| peptide chain release factor 1 [Escherichia coli KTE211]
gi|432984986|ref|ZP_20173715.1| peptide chain release factor 1 [Escherichia coli KTE215]
gi|432990323|ref|ZP_20178989.1| peptide chain release factor 1 [Escherichia coli KTE217]
gi|432994964|ref|ZP_20183578.1| peptide chain release factor 1 [Escherichia coli KTE218]
gi|432999488|ref|ZP_20188021.1| peptide chain release factor 1 [Escherichia coli KTE223]
gi|433004709|ref|ZP_20193145.1| peptide chain release factor 1 [Escherichia coli KTE227]
gi|433011967|ref|ZP_20200364.1| peptide chain release factor 1 [Escherichia coli KTE229]
gi|433013436|ref|ZP_20201807.1| peptide chain release factor 1 [Escherichia coli KTE104]
gi|433018185|ref|ZP_20206440.1| peptide chain release factor 1 [Escherichia coli KTE105]
gi|433028189|ref|ZP_20216055.1| peptide chain release factor 1 [Escherichia coli KTE109]
gi|433032807|ref|ZP_20220568.1| peptide chain release factor 1 [Escherichia coli KTE112]
gi|433038229|ref|ZP_20225838.1| peptide chain release factor 1 [Escherichia coli KTE113]
gi|433042694|ref|ZP_20230212.1| peptide chain release factor 1 [Escherichia coli KTE117]
gi|433047334|ref|ZP_20234737.1| peptide chain release factor 1 [Escherichia coli KTE120]
gi|433052579|ref|ZP_20239796.1| peptide chain release factor 1 [Escherichia coli KTE122]
gi|433057545|ref|ZP_20244622.1| peptide chain release factor 1 [Escherichia coli KTE124]
gi|433062442|ref|ZP_20249393.1| peptide chain release factor 1 [Escherichia coli KTE125]
gi|433067530|ref|ZP_20254344.1| peptide chain release factor 1 [Escherichia coli KTE128]
gi|433072233|ref|ZP_20258922.1| peptide chain release factor 1 [Escherichia coli KTE129]
gi|433077387|ref|ZP_20263945.1| peptide chain release factor 1 [Escherichia coli KTE131]
gi|433082173|ref|ZP_20268645.1| peptide chain release factor 1 [Escherichia coli KTE133]
gi|433086810|ref|ZP_20273201.1| peptide chain release factor 1 [Escherichia coli KTE137]
gi|433091514|ref|ZP_20277806.1| peptide chain release factor 1 [Escherichia coli KTE138]
gi|433096098|ref|ZP_20282306.1| peptide chain release factor 1 [Escherichia coli KTE139]
gi|433100764|ref|ZP_20286868.1| peptide chain release factor 1 [Escherichia coli KTE145]
gi|433105361|ref|ZP_20291373.1| peptide chain release factor 1 [Escherichia coli KTE148]
gi|433110486|ref|ZP_20296356.1| peptide chain release factor 1 [Escherichia coli KTE150]
gi|433115122|ref|ZP_20300933.1| peptide chain release factor 1 [Escherichia coli KTE153]
gi|433124743|ref|ZP_20310325.1| peptide chain release factor 1 [Escherichia coli KTE160]
gi|433129567|ref|ZP_20315029.1| peptide chain release factor 1 [Escherichia coli KTE163]
gi|433134368|ref|ZP_20319734.1| peptide chain release factor 1 [Escherichia coli KTE166]
gi|433138803|ref|ZP_20324082.1| peptide chain release factor 1 [Escherichia coli KTE167]
gi|433143822|ref|ZP_20328982.1| peptide chain release factor 1 [Escherichia coli KTE168]
gi|433148745|ref|ZP_20333790.1| peptide chain release factor 1 [Escherichia coli KTE174]
gi|433153330|ref|ZP_20338292.1| peptide chain release factor 1 [Escherichia coli KTE176]
gi|433158204|ref|ZP_20343063.1| peptide chain release factor 1 [Escherichia coli KTE177]
gi|433163026|ref|ZP_20347782.1| peptide chain release factor 1 [Escherichia coli KTE179]
gi|433168110|ref|ZP_20352766.1| peptide chain release factor 1 [Escherichia coli KTE180]
gi|433173033|ref|ZP_20357580.1| peptide chain release factor 1 [Escherichia coli KTE232]
gi|433177739|ref|ZP_20362181.1| peptide chain release factor 1 [Escherichia coli KTE82]
gi|433182720|ref|ZP_20367010.1| peptide chain release factor 1 [Escherichia coli KTE85]
gi|433187994|ref|ZP_20372106.1| peptide chain release factor 1 [Escherichia coli KTE88]
gi|433193217|ref|ZP_20377225.1| peptide chain release factor 1 [Escherichia coli KTE90]
gi|433197848|ref|ZP_20381765.1| peptide chain release factor 1 [Escherichia coli KTE94]
gi|433202785|ref|ZP_20386574.1| peptide chain release factor 1 [Escherichia coli KTE95]
gi|433207336|ref|ZP_20391028.1| peptide chain release factor 1 [Escherichia coli KTE97]
gi|433212108|ref|ZP_20395716.1| peptide chain release factor 1 [Escherichia coli KTE99]
gi|433322613|ref|ZP_20400016.1| peptide chain release factor 1 [Escherichia coli J96]
gi|442599232|ref|ZP_21016954.1| Peptide chain release factor 1 [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|442607619|ref|ZP_21022384.1| Peptide chain release factor 1 [Escherichia coli Nissle 1917]
gi|443617303|ref|YP_007381159.1| peptide chain release factor 1 [Escherichia coli APEC O78]
gi|444924190|ref|ZP_21243709.1| peptide chain release factor 1 [Escherichia coli 09BKT078844]
gi|444930229|ref|ZP_21249339.1| peptide chain release factor 1 [Escherichia coli 99.0814]
gi|444935468|ref|ZP_21254345.1| peptide chain release factor 1 [Escherichia coli 99.0815]
gi|444941150|ref|ZP_21259744.1| peptide chain release factor 1 [Escherichia coli 99.0816]
gi|444946686|ref|ZP_21265062.1| peptide chain release factor 1 [Escherichia coli 99.0839]
gi|444952311|ref|ZP_21270478.1| peptide chain release factor 1 [Escherichia coli 99.0848]
gi|444957776|ref|ZP_21275714.1| peptide chain release factor 1 [Escherichia coli 99.1753]
gi|444968765|ref|ZP_21286199.1| peptide chain release factor 1 [Escherichia coli 99.1793]
gi|444974232|ref|ZP_21291451.1| peptide chain release factor 1 [Escherichia coli 99.1805]
gi|444979744|ref|ZP_21296705.1| peptide chain release factor 1 [Escherichia coli ATCC 700728]
gi|444985055|ref|ZP_21301885.1| peptide chain release factor 1 [Escherichia coli PA11]
gi|444990342|ref|ZP_21307045.1| peptide chain release factor 1 [Escherichia coli PA19]
gi|444995548|ref|ZP_21312109.1| peptide chain release factor 1 [Escherichia coli PA13]
gi|445001222|ref|ZP_21317653.1| peptide chain release factor 1 [Escherichia coli PA2]
gi|445006635|ref|ZP_21322938.1| peptide chain release factor 1 [Escherichia coli PA47]
gi|445011815|ref|ZP_21327967.1| peptide chain release factor 1 [Escherichia coli PA48]
gi|445017499|ref|ZP_21333515.1| peptide chain release factor 1 [Escherichia coli PA8]
gi|445023076|ref|ZP_21338961.1| peptide chain release factor 1 [Escherichia coli 7.1982]
gi|445028244|ref|ZP_21343987.1| peptide chain release factor 1 [Escherichia coli 99.1781]
gi|445033795|ref|ZP_21349380.1| peptide chain release factor 1 [Escherichia coli 99.1762]
gi|445039495|ref|ZP_21354923.1| peptide chain release factor 1 [Escherichia coli PA35]
gi|445050295|ref|ZP_21365418.1| peptide chain release factor 1 [Escherichia coli 95.0083]
gi|445056017|ref|ZP_21370929.1| peptide chain release factor 1 [Escherichia coli 99.0670]
gi|450187869|ref|ZP_21890003.1| peptide chain release factor 1 [Escherichia coli SEPT362]
gi|450213603|ref|ZP_21894936.1| peptide chain release factor 1 [Escherichia coli O08]
gi|450242053|ref|ZP_21899789.1| peptide chain release factor 1 [Escherichia coli S17]
gi|452971291|ref|ZP_21969518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4009]
gi|67471891|sp|P0A7I0.1|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|67471892|sp|P0A7I1.1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|67471893|sp|P0A7I2.1|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|67471894|sp|P0A7I3.1|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361536|sp|Q0TIF9.1|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361537|sp|Q1RCM7.1|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361608|sp|Q32GZ6.1|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361609|sp|Q3Z0S9.1|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|122957490|sp|Q0T5I4.1|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223555|sp|A1AAD8.1|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166977361|sp|A7ZKY5.1|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166977362|sp|A7ZZE7.1|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039971|sp|B1IU82.1|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739104|sp|B7MKB3.1|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739105|sp|B7NUX7.1|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739106|sp|B7LXC6.1|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739107|sp|B7N422.1|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739108|sp|B1LH89.1|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739109|sp|B7LSH9.1|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229576656|sp|B1XAQ2.1|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238058712|sp|B5YXM9.1|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238058713|sp|B6I9S6.1|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790881|sp|B7LGX2.1|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|259585238|sp|C4ZTQ2.1|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073]
gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12
substr. W3110]
gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
substr. MG1655]
gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
Sakai]
gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301]
gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T]
gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046]
gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197]
gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89]
gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536]
gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401]
gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1]
gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS]
gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A]
gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
substr. DH10B]
gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4196]
gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4113]
gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638]
gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4076]
gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4401]
gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4486]
gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4501]
gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC869]
gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC508]
gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11]
gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22]
gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019]
gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171]
gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1]
gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4206]
gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4045]
gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4042]
gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC4115]
gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli]
gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli]
gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli]
gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli]
gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli]
gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11]
gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
TW14588]
gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989]
gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC
35469]
gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1]
gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88]
gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39]
gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026]
gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82]
gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972]
gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
TW14359]
gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
11368]
gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
12009]
gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
11128]
gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1]
gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15]
gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042]
gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
CB9615]
gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088]
gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185]
gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354]
gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034]
gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101]
gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W]
gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146]
gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70]
gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
857C]
gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W]
gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1]
gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431]
gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
EC1212]
gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
G5101]
gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
493-89]
gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
2687]
gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
5905]
gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
LSU-61]
gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14]
gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010]
gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G]
gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli OK1180]
gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli OK1357]
gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11FL]
gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520]
gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482]
gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120]
gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252]
gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263]
gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489]
gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007]
gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509]
gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167]
gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86]
gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736]
gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605]
gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143]
gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271]
gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591]
gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299]
gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82]
gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9]
gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671]
gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6]
gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218]
gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272]
gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304]
gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227]
gi|333969396|gb|AEG36201.1| Peptide chain release factor 1 [Escherichia coli NA114]
gi|338770746|gb|EGP25504.1| Peptide chain release factor 1 [Escherichia coli PCN033]
gi|339414499|gb|AEJ56171.1| peptide chain release factor 1 [Escherichia coli UMNF18]
gi|340734953|gb|EGR64043.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
01-09591]
gi|340740891|gb|EGR75069.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
LB226692]
gi|341918164|gb|EGT67778.1| hypothetical protein C22711_1807 [Escherichia coli O104:H4 str.
C227-11]
gi|342363886|gb|EGU27990.1| peptide chain release factor 1 [Escherichia coli XH140A]
gi|344194229|gb|EGV48304.1| peptide chain release factor 1 [Escherichia coli XH001]
gi|345339292|gb|EGW71718.1| peptide chain release factor 1 [Escherichia coli STEC_C165-02]
gi|345342187|gb|EGW74585.1| peptide chain release factor 1 [Escherichia coli STEC_B2F1]
gi|345343356|gb|EGW75744.1| peptide chain release factor 1 [Escherichia coli 2534-86]
gi|345352276|gb|EGW84526.1| peptide chain release factor 1 [Escherichia coli STEC_94C]
gi|345361607|gb|EGW93766.1| peptide chain release factor 1 [Escherichia coli STEC_DG131-3]
gi|345364437|gb|EGW96562.1| peptide chain release factor 1 [Escherichia coli STEC_EH250]
gi|345376138|gb|EGX08083.1| peptide chain release factor 1 [Escherichia coli STEC_MHI813]
gi|345379807|gb|EGX11715.1| peptide chain release factor 1 [Escherichia coli G58-1]
gi|345381451|gb|EGX13331.1| peptide chain release factor 1 [Escherichia coli STEC_H.1.8]
gi|345389310|gb|EGX19116.1| peptide chain release factor 1 [Escherichia coli STEC_S1191]
gi|345394253|gb|EGX24017.1| peptide chain release factor 1 [Escherichia coli TX1999]
gi|349737494|gb|AEQ12200.1| peptide chain release factor RF-1 [Escherichia coli O7:K1 str.
CE10]
gi|354857305|gb|EHF17761.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
C227-11]
gi|354865097|gb|EHF25526.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
C236-11]
gi|354871876|gb|EHF32273.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
04-8351]
gi|354875378|gb|EHF35744.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
09-7901]
gi|354877626|gb|EHF37985.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4404]
gi|354882450|gb|EHF42774.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4522]
gi|354883158|gb|EHF43480.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-3677]
gi|354899459|gb|EHF59608.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354901282|gb|EHF61410.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4623]
gi|354902936|gb|EHF63049.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354905129|gb|EHF65214.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354916356|gb|EHF76330.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354921519|gb|EHF81444.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|355352339|gb|EHG01519.1| peptide chain release factor 1 [Escherichia coli cloneA_i1]
gi|355419880|gb|AER84077.1| peptide chain release factor 1 [Escherichia coli str. 'clone D i2']
gi|355424800|gb|AER88996.1| peptide chain release factor 1 [Escherichia coli str. 'clone D
i14']
gi|359331829|dbj|BAL38276.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
substr. MDS42]
gi|371596457|gb|EHN85295.1| peptide chain release factor 1 [Escherichia coli H494]
gi|371598854|gb|EHN87646.1| peptide chain release factor 1 [Escherichia coli TA124]
gi|371601577|gb|EHN90312.1| peptide chain release factor 1 [Escherichia coli B093]
gi|371608809|gb|EHN97359.1| peptide chain release factor 1 [Escherichia coli H397]
gi|371609307|gb|EHN97847.1| peptide chain release factor 1 [Escherichia coli E101]
gi|374358337|gb|AEZ40044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
RM12579]
gi|375323078|gb|EHS68802.1| peptide chain release factor 1 [Escherichia coli O157:H43 str. T22]
gi|377897603|gb|EHU61979.1| peptide chain release factor 1 [Escherichia coli DEC3A]
gi|377898174|gb|EHU62535.1| peptide chain release factor 1 [Escherichia coli DEC3B]
gi|377909246|gb|EHU73449.1| peptide chain release factor 1 [Escherichia coli DEC3C]
gi|377914808|gb|EHU78929.1| peptide chain release factor 1 [Escherichia coli DEC3D]
gi|377916662|gb|EHU80739.1| peptide chain release factor 1 [Escherichia coli DEC3E]
gi|377927336|gb|EHU91252.1| peptide chain release factor 1 [Escherichia coli DEC3F]
gi|377947073|gb|EHV10742.1| peptide chain release factor 1 [Escherichia coli DEC4C]
gi|377947631|gb|EHV11297.1| peptide chain release factor 1 [Escherichia coli DEC4D]
gi|377952033|gb|EHV15635.1| peptide chain release factor 1 [Escherichia coli DEC4E]
gi|377961944|gb|EHV25408.1| peptide chain release factor 1 [Escherichia coli DEC4F]
gi|377963884|gb|EHV27324.1| peptide chain release factor 1 [Escherichia coli DEC5A]
gi|377971470|gb|EHV34827.1| peptide chain release factor 1 [Escherichia coli DEC5B]
gi|377977766|gb|EHV41049.1| peptide chain release factor 1 [Escherichia coli DEC5C]
gi|377979619|gb|EHV42896.1| peptide chain release factor 1 [Escherichia coli DEC5D]
gi|377985965|gb|EHV49170.1| peptide chain release factor 1 [Escherichia coli DEC5E]
gi|377997500|gb|EHV60604.1| peptide chain release factor 1 [Escherichia coli DEC6A]
gi|378011516|gb|EHV74459.1| peptide chain release factor 1 [Escherichia coli DEC6D]
gi|378013256|gb|EHV76176.1| peptide chain release factor 1 [Escherichia coli DEC6E]
gi|378017678|gb|EHV80548.1| peptide chain release factor 1 [Escherichia coli DEC7A]
gi|378026197|gb|EHV88836.1| peptide chain release factor 1 [Escherichia coli DEC7C]
gi|378031214|gb|EHV93802.1| peptide chain release factor 1 [Escherichia coli DEC7D]
gi|378035582|gb|EHV98135.1| peptide chain release factor 1 [Escherichia coli DEC7B]
gi|378041123|gb|EHW03586.1| peptide chain release factor 1 [Escherichia coli DEC7E]
gi|378050226|gb|EHW12556.1| peptide chain release factor 1 [Escherichia coli DEC8A]
gi|378053680|gb|EHW15975.1| peptide chain release factor 1 [Escherichia coli DEC8B]
gi|378057914|gb|EHW20135.1| peptide chain release factor 1 [Escherichia coli DEC8C]
gi|378065773|gb|EHW27915.1| peptide chain release factor 1 [Escherichia coli DEC8D]
gi|378069818|gb|EHW31902.1| peptide chain release factor 1 [Escherichia coli DEC8E]
gi|378077733|gb|EHW39726.1| peptide chain release factor 1 [Escherichia coli DEC9A]
gi|378080563|gb|EHW42524.1| peptide chain release factor 1 [Escherichia coli DEC9B]
gi|378093384|gb|EHW55197.1| peptide chain release factor 1 [Escherichia coli DEC9D]
gi|378098227|gb|EHW59969.1| peptide chain release factor 1 [Escherichia coli DEC9E]
gi|378103012|gb|EHW64683.1| peptide chain release factor 1 [Escherichia coli DEC10A]
gi|378114675|gb|EHW76227.1| peptide chain release factor 1 [Escherichia coli DEC10C]
gi|378119855|gb|EHW81343.1| peptide chain release factor 1 [Escherichia coli DEC10D]
gi|378132655|gb|EHW94007.1| peptide chain release factor 1 [Escherichia coli DEC10E]
gi|378133469|gb|EHW94814.1| peptide chain release factor 1 [Escherichia coli DEC11A]
gi|378143258|gb|EHX04450.1| peptide chain release factor 1 [Escherichia coli DEC11B]
gi|378151097|gb|EHX12210.1| peptide chain release factor 1 [Escherichia coli DEC11D]
gi|378154043|gb|EHX15120.1| peptide chain release factor 1 [Escherichia coli DEC11C]
gi|378159473|gb|EHX20477.1| peptide chain release factor 1 [Escherichia coli DEC11E]
gi|378171127|gb|EHX31999.1| peptide chain release factor 1 [Escherichia coli DEC12B]
gi|378172887|gb|EHX33734.1| peptide chain release factor 1 [Escherichia coli DEC12A]
gi|378174380|gb|EHX35206.1| peptide chain release factor 1 [Escherichia coli DEC12C]
gi|378186158|gb|EHX46781.1| peptide chain release factor 1 [Escherichia coli DEC12D]
gi|378189257|gb|EHX49851.1| peptide chain release factor 1 [Escherichia coli DEC13A]
gi|378192681|gb|EHX53236.1| peptide chain release factor 1 [Escherichia coli DEC12E]
gi|378204929|gb|EHX65345.1| peptide chain release factor 1 [Escherichia coli DEC13B]
gi|378205717|gb|EHX66126.1| peptide chain release factor 1 [Escherichia coli DEC13C]
gi|378206048|gb|EHX66454.1| peptide chain release factor 1 [Escherichia coli DEC13D]
gi|378216563|gb|EHX76850.1| peptide chain release factor 1 [Escherichia coli DEC13E]
gi|378221197|gb|EHX81448.1| peptide chain release factor 1 [Escherichia coli DEC14A]
gi|378222714|gb|EHX82949.1| peptide chain release factor 1 [Escherichia coli DEC14B]
gi|378233893|gb|EHX93976.1| peptide chain release factor 1 [Escherichia coli DEC14D]
gi|378240041|gb|EHY00018.1| peptide chain release factor 1 [Escherichia coli DEC15A]
gi|378248406|gb|EHY08320.1| peptide chain release factor 1 [Escherichia coli DEC15B]
gi|378255759|gb|EHY15614.1| peptide chain release factor 1 [Escherichia coli DEC15D]
gi|378260325|gb|EHY20130.1| peptide chain release factor 1 [Escherichia coli DEC15E]
gi|380348738|gb|EIA37016.1| peptide chain release factor 1 [Escherichia coli SCI-07]
gi|383103264|gb|AFG40773.1| Peptide chain release factor 1 [Escherichia coli P12b]
gi|383393364|gb|AFH18322.1| peptide chain release factor 1 [Escherichia coli KO11FL]
gi|383404692|gb|AFH10935.1| peptide chain release factor 1 [Escherichia coli W]
gi|383466712|gb|EID61733.1| peptide chain release factor 1 [Shigella flexneri 5a str. M90T]
gi|383473706|gb|EID65720.1| peptide chain release factor 1 [Escherichia coli W26]
gi|384378773|gb|EIE36650.1| peptide chain release factor 1 [Escherichia coli J53]
gi|384469675|gb|EIE53823.1| peptide chain release factor 1 [Escherichia coli AI27]
gi|385153872|gb|EIF15896.1| peptide chain release factor 1 [Escherichia coli O32:H37 str. P4]
gi|385538976|gb|EIF85818.1| peptide chain release factor 1 [Escherichia coli M919]
gi|385706902|gb|EIG43940.1| peptide chain release factor 1 [Escherichia coli B799]
gi|385711437|gb|EIG48396.1| peptide chain release factor 1 [Escherichia coli H730]
gi|386152751|gb|EIH04040.1| peptide chain release factor 1 [Escherichia coli 5.0588]
gi|386158727|gb|EIH15060.1| peptide chain release factor 1 [Escherichia coli 97.0259]
gi|386164872|gb|EIH26657.1| peptide chain release factor 1 [Escherichia coli 1.2264]
gi|386167682|gb|EIH34198.1| peptide chain release factor 1 [Escherichia coli 96.0497]
gi|386175641|gb|EIH47630.1| peptide chain release factor 1 [Escherichia coli 99.0741]
gi|386180102|gb|EIH57576.1| peptide chain release factor 1 [Escherichia coli 3.2608]
gi|386185626|gb|EIH68352.1| peptide chain release factor 1 [Escherichia coli 93.0624]
gi|386187503|gb|EIH76321.1| peptide chain release factor 1 [Escherichia coli 4.0522]
gi|386197860|gb|EIH92054.1| peptide chain release factor 1 [Escherichia coli JB1-95]
gi|386200112|gb|EIH99103.1| peptide chain release factor 1 [Escherichia coli 96.154]
gi|386214539|gb|EII24960.1| peptide chain release factor 1 [Escherichia coli 9.0111]
gi|386216113|gb|EII32605.1| peptide chain release factor 1 [Escherichia coli 4.0967]
gi|386226098|gb|EII48420.1| peptide chain release factor 1 [Escherichia coli 2.3916]
gi|386231385|gb|EII58733.1| peptide chain release factor 1 [Escherichia coli 3.3884]
gi|386232792|gb|EII64777.1| peptide chain release factor 1 [Escherichia coli 2.4168]
gi|386238895|gb|EII75830.1| peptide chain release factor 1 [Escherichia coli 3.2303]
gi|386247421|gb|EII93594.1| peptide chain release factor 1 [Escherichia coli TW07793]
gi|386255691|gb|EIJ05379.1| peptide chain release factor 1 [Escherichia coli B41]
gi|386258989|gb|EIJ14466.1| peptide chain release factor 1 [Escherichia coli 900105 (10e)]
gi|386795667|gb|AFJ28701.1| peptide chain release factor 1 [Escherichia coli Xuzhou21]
gi|388332573|gb|EIK99238.1| peptide chain release factor 1 [Escherichia coli O103:H25 str.
CVM9340]
gi|388338786|gb|EIL05216.1| peptide chain release factor 1 [Escherichia coli O103:H2 str.
CVM9450]
gi|388343297|gb|EIL09262.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9534]
gi|388355496|gb|EIL20325.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9570]
gi|388363856|gb|EIL27754.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9574]
gi|388371208|gb|EIL34698.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9545]
gi|388371911|gb|EIL35365.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM9942]
gi|388379550|gb|EIL42202.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10026]
gi|388385093|gb|EIL46797.1| peptide chain release factor 1 [Escherichia coli KD1]
gi|388391507|gb|EIL52971.1| peptide chain release factor 1 [Escherichia coli KD2]
gi|388402605|gb|EIL63175.1| peptide chain release factor 1 [Escherichia coli 75]
gi|388405741|gb|EIL66161.1| peptide chain release factor 1 [Escherichia coli 541-1]
gi|388412646|gb|EIL72690.1| peptide chain release factor 1 [Escherichia coli 576-1]
gi|388413877|gb|EIL73859.1| peptide chain release factor 1 [Escherichia coli CUMT8]
gi|388420588|gb|EIL80276.1| peptide chain release factor 1 [Escherichia coli HM605]
gi|390647711|gb|EIN26559.1| peptide chain release factor 1 [Escherichia coli FRIK1996]
gi|390648203|gb|EIN26962.1| peptide chain release factor 1 [Escherichia coli FDA517]
gi|390648599|gb|EIN27274.1| peptide chain release factor 1 [Escherichia coli FDA505]
gi|390666492|gb|EIN43653.1| peptide chain release factor 1 [Escherichia coli 93-001]
gi|390668381|gb|EIN45200.1| peptide chain release factor 1 [Escherichia coli FRIK1985]
gi|390668538|gb|EIN45334.1| peptide chain release factor 1 [Escherichia coli FRIK1990]
gi|390685415|gb|EIN60894.1| peptide chain release factor 1 [Escherichia coli PA3]
gi|390687512|gb|EIN62707.1| peptide chain release factor 1 [Escherichia coli PA5]
gi|390687936|gb|EIN63075.1| peptide chain release factor 1 [Escherichia coli PA9]
gi|390704956|gb|EIN78770.1| peptide chain release factor 1 [Escherichia coli PA10]
gi|390705801|gb|EIN79472.1| peptide chain release factor 1 [Escherichia coli PA15]
gi|390706459|gb|EIN80012.1| peptide chain release factor 1 [Escherichia coli PA14]
gi|390717771|gb|EIN90547.1| peptide chain release factor 1 [Escherichia coli PA22]
gi|390729936|gb|EIO02060.1| peptide chain release factor 1 [Escherichia coli PA24]
gi|390730286|gb|EIO02345.1| peptide chain release factor 1 [Escherichia coli PA25]
gi|390731889|gb|EIO03689.1| peptide chain release factor 1 [Escherichia coli PA28]
gi|390748284|gb|EIO18740.1| peptide chain release factor 1 [Escherichia coli PA31]
gi|390748501|gb|EIO18912.1| peptide chain release factor 1 [Escherichia coli PA32]
gi|390750310|gb|EIO20412.1| peptide chain release factor 1 [Escherichia coli PA33]
gi|390760066|gb|EIO29408.1| peptide chain release factor 1 [Escherichia coli PA40]
gi|390772503|gb|EIO41042.1| peptide chain release factor 1 [Escherichia coli PA41]
gi|390773794|gb|EIO42120.1| peptide chain release factor 1 [Escherichia coli PA42]
gi|390774617|gb|EIO42793.1| peptide chain release factor 1 [Escherichia coli PA39]
gi|390783876|gb|EIO51461.1| peptide chain release factor 1 [Escherichia coli TW06591]
gi|390792796|gb|EIO60144.1| peptide chain release factor 1 [Escherichia coli TW10246]
gi|390799804|gb|EIO66932.1| peptide chain release factor 1 [Escherichia coli TW11039]
gi|390800595|gb|EIO67684.1| peptide chain release factor 1 [Escherichia coli TW07945]
gi|390809603|gb|EIO76387.1| peptide chain release factor 1 [Escherichia coli TW09109]
gi|390815394|gb|EIO81928.1| peptide chain release factor 1 [Escherichia coli TW09098]
gi|390817613|gb|EIO84033.1| peptide chain release factor 1 [Escherichia coli TW10119]
gi|390833425|gb|EIO98458.1| peptide chain release factor 1 [Escherichia coli EC4203]
gi|390835200|gb|EIO99984.1| peptide chain release factor 1 [Escherichia coli TW09195]
gi|390836695|gb|EIP01190.1| peptide chain release factor 1 [Escherichia coli EC4196]
gi|390852567|gb|EIP15715.1| peptide chain release factor 1 [Escherichia coli TW14301]
gi|390853841|gb|EIP16807.1| peptide chain release factor 1 [Escherichia coli TW14313]
gi|390854560|gb|EIP17367.1| peptide chain release factor 1 [Escherichia coli EC4421]
gi|390867116|gb|EIP28969.1| peptide chain release factor 1 [Escherichia coli EC4422]
gi|390871040|gb|EIP32483.1| peptide chain release factor 1 [Escherichia coli EC4013]
gi|390879045|gb|EIP39847.1| peptide chain release factor 1 [Escherichia coli EC4402]
gi|390883529|gb|EIP43961.1| peptide chain release factor 1 [Escherichia coli EC4439]
gi|390887815|gb|EIP47737.1| peptide chain release factor 1 [Escherichia coli EC4436]
gi|390902047|gb|EIP61185.1| peptide chain release factor 1 [Escherichia coli EC4437]
gi|390902230|gb|EIP61349.1| peptide chain release factor 1 [Escherichia coli EC1738]
gi|390905312|gb|EIP64261.1| peptide chain release factor 1 [Escherichia coli EC4448]
gi|390911698|gb|EIP70392.1| peptide chain release factor 1 [Escherichia coli EC1734]
gi|390922650|gb|EIP80680.1| peptide chain release factor 1 [Escherichia coli EC1863]
gi|390923726|gb|EIP81602.1| peptide chain release factor 1 [Escherichia coli EC1845]
gi|391251972|gb|EIQ11176.1| peptide chain release factor 1 [Shigella flexneri 2850-71]
gi|391255834|gb|EIQ14974.1| peptide chain release factor 1 [Shigella flexneri K-1770]
gi|391273694|gb|EIQ32517.1| peptide chain release factor 1 [Shigella boydii 965-58]
gi|391282568|gb|EIQ41198.1| peptide chain release factor 1 [Shigella sonnei 3226-85]
gi|391285505|gb|EIQ44084.1| peptide chain release factor 1 [Shigella sonnei 3233-85]
gi|391294299|gb|EIQ52531.1| peptide chain release factor 1 [Shigella sonnei 4822-66]
gi|391307614|gb|EIQ65345.1| peptide chain release factor 1 [Escherichia coli EPECa12]
gi|394386783|gb|EJE64261.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9602]
gi|394393164|gb|EJE69858.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CVM9634]
gi|394396566|gb|EJE72903.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10224]
gi|394402078|gb|EJE77831.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10021]
gi|394410575|gb|EJE84939.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9553]
gi|394416585|gb|EJE90370.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CVM9455]
gi|394419309|gb|EJE92923.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM9952]
gi|394425543|gb|EJE98492.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CVM10030]
gi|397785936|gb|EJK96779.1| peptide chain release factor 1 [Escherichia coli STEC_O31]
gi|397899322|gb|EJL15697.1| peptide chain release factor 1 [Shigella flexneri 6603-63]
gi|397900096|gb|EJL16463.1| peptide chain release factor 1 [Shigella sonnei str. Moseley]
gi|404291960|gb|EJZ48807.1| peptide chain release factor 1 [Escherichia sp. 1_1_43]
gi|406778166|gb|AFS57590.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054749|gb|AFS74800.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064916|gb|AFS85963.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408069723|gb|EKH04106.1| peptide chain release factor 1 [Escherichia coli PA7]
gi|408073966|gb|EKH08268.1| peptide chain release factor 1 [Escherichia coli FRIK920]
gi|408082115|gb|EKH16103.1| peptide chain release factor 1 [Escherichia coli PA34]
gi|408084962|gb|EKH18667.1| peptide chain release factor 1 [Escherichia coli FDA506]
gi|408088063|gb|EKH21455.1| peptide chain release factor 1 [Escherichia coli FDA507]
gi|408098324|gb|EKH31119.1| peptide chain release factor 1 [Escherichia coli FDA504]
gi|408104677|gb|EKH36948.1| peptide chain release factor 1 [Escherichia coli FRIK1999]
gi|408111424|gb|EKH43173.1| peptide chain release factor 1 [Escherichia coli FRIK1997]
gi|408115882|gb|EKH47243.1| peptide chain release factor 1 [Escherichia coli NE1487]
gi|408123971|gb|EKH54675.1| peptide chain release factor 1 [Escherichia coli NE037]
gi|408127932|gb|EKH58363.1| peptide chain release factor 1 [Escherichia coli FRIK2001]
gi|408133752|gb|EKH63627.1| peptide chain release factor 1 [Escherichia coli PA4]
gi|408146546|gb|EKH75653.1| peptide chain release factor 1 [Escherichia coli PA23]
gi|408147278|gb|EKH76259.1| peptide chain release factor 1 [Escherichia coli PA49]
gi|408151127|gb|EKH79639.1| peptide chain release factor 1 [Escherichia coli PA45]
gi|408162035|gb|EKH89956.1| peptide chain release factor 1 [Escherichia coli TT12B]
gi|408166947|gb|EKH94482.1| peptide chain release factor 1 [Escherichia coli MA6]
gi|408168613|gb|EKH95994.1| peptide chain release factor 1 [Escherichia coli 5905]
gi|408182371|gb|EKI08880.1| peptide chain release factor 1 [Escherichia coli CB7326]
gi|408186732|gb|EKI12747.1| peptide chain release factor 1 [Escherichia coli 5412]
gi|408187374|gb|EKI13343.1| peptide chain release factor 1 [Escherichia coli EC96038]
gi|408195355|gb|EKI20747.1| peptide chain release factor 1 [Escherichia coli TW15901]
gi|408204218|gb|EKI29214.1| peptide chain release factor 1 [Escherichia coli TW00353]
gi|408216317|gb|EKI40648.1| peptide chain release factor 1 [Escherichia coli 3006]
gi|408224667|gb|EKI48372.1| peptide chain release factor 1 [Escherichia coli PA38]
gi|408233313|gb|EKI56447.1| peptide chain release factor 1 [Escherichia coli EC1735]
gi|408245012|gb|EKI67407.1| peptide chain release factor 1 [Escherichia coli EC1736]
gi|408248012|gb|EKI70115.1| peptide chain release factor 1 [Escherichia coli EC1737]
gi|408252920|gb|EKI74539.1| peptide chain release factor 1 [Escherichia coli EC1846]
gi|408263339|gb|EKI84200.1| peptide chain release factor 1 [Escherichia coli EC1847]
gi|408266003|gb|EKI86656.1| peptide chain release factor 1 [Escherichia coli EC1848]
gi|408271625|gb|EKI91747.1| peptide chain release factor 1 [Escherichia coli EC1849]
gi|408280836|gb|EKJ00309.1| peptide chain release factor 1 [Escherichia coli EC1850]
gi|408282652|gb|EKJ01934.1| peptide chain release factor 1 [Escherichia coli EC1856]
gi|408296241|gb|EKJ14491.1| peptide chain release factor 1 [Escherichia coli EC1862]
gi|408296866|gb|EKJ15048.1| peptide chain release factor 1 [Escherichia coli EC1864]
gi|408302035|gb|EKJ19585.1| peptide chain release factor 1 [Escherichia coli EC1865]
gi|408313044|gb|EKJ29740.1| peptide chain release factor 1 [Escherichia coli EC1868]
gi|408313224|gb|EKJ29901.1| peptide chain release factor 1 [Escherichia coli EC1866]
gi|408327550|gb|EKJ43233.1| peptide chain release factor 1 [Escherichia coli EC1869]
gi|408331047|gb|EKJ46249.1| peptide chain release factor 1 [Escherichia coli NE098]
gi|408331913|gb|EKJ47029.1| peptide chain release factor 1 [Escherichia coli EC1870]
gi|408346119|gb|EKJ60421.1| peptide chain release factor 1 [Escherichia coli FRIK523]
gi|408346582|gb|EKJ60877.1| peptide chain release factor 1 [Escherichia coli 0.1288]
gi|408351592|gb|EKJ65330.1| peptide chain release factor 1 [Escherichia coli 0.1304]
gi|408458557|gb|EKJ82344.1| peptide chain release factor 1 [Escherichia coli AD30]
gi|408555031|gb|EKK31903.1| peptide chain release factor 1 [Escherichia coli 5.2239]
gi|408555468|gb|EKK32255.1| peptide chain release factor 1 [Escherichia coli 3.4870]
gi|408555628|gb|EKK32387.1| peptide chain release factor 1 [Escherichia coli 6.0172]
gi|408571299|gb|EKK47248.1| peptide chain release factor 1 [Escherichia coli 8.0566]
gi|408572254|gb|EKK48175.1| peptide chain release factor 1 [Escherichia coli 8.0569]
gi|408577965|gb|EKK53512.1| peptide chain release factor 1 [Escherichia coli 10.0833]
gi|408579796|gb|EKK55245.1| peptide chain release factor 1 [Escherichia coli 8.0586]
gi|408585050|gb|EKK59954.1| peptide chain release factor 1 [Escherichia coli 8.2524]
gi|408596915|gb|EKK71009.1| peptide chain release factor 1 [Escherichia coli 10.0869]
gi|408602734|gb|EKK76429.1| peptide chain release factor 1 [Escherichia coli 88.0221]
gi|408603698|gb|EKK77329.1| peptide chain release factor 1 [Escherichia coli 8.0416]
gi|408615348|gb|EKK88560.1| peptide chain release factor 1 [Escherichia coli 10.0821]
gi|412962529|emb|CCK46444.1| peptide chain release factor RF-1 [Escherichia coli chi7122]
gi|412969110|emb|CCJ43738.1| peptide chain release factor RF-1 [Escherichia coli]
gi|421943512|gb|EKU00797.1| peptide chain release factor 1 [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421945716|gb|EKU02910.1| peptide chain release factor 1 [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949778|gb|EKU06698.1| peptide chain release factor 1 [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427209700|gb|EKV79726.1| peptide chain release factor 1 [Escherichia coli 89.0511]
gi|427211081|gb|EKV80887.1| peptide chain release factor 1 [Escherichia coli 88.1042]
gi|427212793|gb|EKV82329.1| peptide chain release factor 1 [Escherichia coli 88.1467]
gi|427227355|gb|EKV95931.1| peptide chain release factor 1 [Escherichia coli 90.2281]
gi|427230684|gb|EKV98843.1| peptide chain release factor 1 [Escherichia coli 90.0091]
gi|427230951|gb|EKV99046.1| peptide chain release factor 1 [Escherichia coli 90.0039]
gi|427245892|gb|EKW13162.1| peptide chain release factor 1 [Escherichia coli 93.0055]
gi|427247554|gb|EKW14607.1| peptide chain release factor 1 [Escherichia coli 93.0056]
gi|427249707|gb|EKW16459.1| peptide chain release factor 1 [Escherichia coli 94.0618]
gi|427266766|gb|EKW32186.1| peptide chain release factor 1 [Escherichia coli 95.0943]
gi|427266958|gb|EKW32354.1| peptide chain release factor 1 [Escherichia coli 95.0183]
gi|427268835|gb|EKW33904.1| peptide chain release factor 1 [Escherichia coli 95.1288]
gi|427283000|gb|EKW47237.1| peptide chain release factor 1 [Escherichia coli 96.0428]
gi|427286435|gb|EKW50276.1| peptide chain release factor 1 [Escherichia coli 96.0427]
gi|427288012|gb|EKW51681.1| peptide chain release factor 1 [Escherichia coli 96.0939]
gi|427300259|gb|EKW63210.1| peptide chain release factor 1 [Escherichia coli 96.0932]
gi|427303015|gb|EKW65760.1| peptide chain release factor 1 [Escherichia coli 97.0003]
gi|427305171|gb|EKW67772.1| peptide chain release factor 1 [Escherichia coli 96.0107]
gi|427318330|gb|EKW80202.1| peptide chain release factor 1 [Escherichia coli 97.1742]
gi|427319576|gb|EKW81385.1| peptide chain release factor 1 [Escherichia coli 97.0007]
gi|427329549|gb|EKW90874.1| peptide chain release factor 1 [Escherichia coli 99.0672]
gi|427331744|gb|EKW92943.1| peptide chain release factor 1 [Escherichia coli 99.0678]
gi|427331818|gb|EKW93015.1| peptide chain release factor 1 [Escherichia coli 99.0713]
gi|429257421|gb|EKY41481.1| peptide chain release factor 1 [Escherichia coli 96.0109]
gi|429258848|gb|EKY42637.1| peptide chain release factor 1 [Escherichia coli 97.0010]
gi|429355461|gb|EKY92151.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02030]
gi|429359373|gb|EKY96038.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02092]
gi|429363274|gb|EKY99917.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429373621|gb|EKZ10165.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02093]
gi|429377362|gb|EKZ13886.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02281]
gi|429378966|gb|EKZ15473.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02318]
gi|429388250|gb|EKZ24676.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-03439]
gi|429390113|gb|EKZ26529.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-02913]
gi|429393952|gb|EKZ30339.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-03943]
gi|429395255|gb|EKZ31623.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429403939|gb|EKZ40220.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
11-04080]
gi|429405057|gb|EKZ41324.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409045|gb|EKZ45279.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429417120|gb|EKZ53271.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429421948|gb|EKZ58069.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429423689|gb|EKZ59797.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429425760|gb|EKZ61849.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429432847|gb|EKZ68884.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429442755|gb|EKZ78711.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429447659|gb|EKZ83577.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429452314|gb|EKZ88200.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429454711|gb|EKZ90570.1| peptide chain release factor 1 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430878582|gb|ELC01993.1| peptide chain release factor 1 [Escherichia coli KTE4]
gi|430880366|gb|ELC03677.1| peptide chain release factor 1 [Escherichia coli KTE2]
gi|430887583|gb|ELC10328.1| peptide chain release factor 1 [Escherichia coli KTE10]
gi|430888625|gb|ELC11297.1| peptide chain release factor 1 [Escherichia coli KTE5]
gi|430900231|gb|ELC22252.1| peptide chain release factor 1 [Escherichia coli KTE12]
gi|430908061|gb|ELC29554.1| peptide chain release factor 1 [Escherichia coli KTE16]
gi|430909702|gb|ELC31067.1| peptide chain release factor 1 [Escherichia coli KTE15]
gi|430916587|gb|ELC37647.1| peptide chain release factor 1 [Escherichia coli KTE25]
gi|430921839|gb|ELC42663.1| peptide chain release factor 1 [Escherichia coli KTE21]
gi|430926325|gb|ELC46912.1| peptide chain release factor 1 [Escherichia coli KTE26]
gi|430931350|gb|ELC51802.1| peptide chain release factor 1 [Escherichia coli KTE28]
gi|430936378|gb|ELC56656.1| peptide chain release factor 1 [Escherichia coli KTE39]
gi|430942022|gb|ELC62162.1| peptide chain release factor 1 [Escherichia coli KTE44]
gi|430945734|gb|ELC65800.1| peptide chain release factor 1 [Escherichia coli KTE178]
gi|430954478|gb|ELC73348.1| peptide chain release factor 1 [Escherichia coli KTE187]
gi|430957092|gb|ELC75746.1| peptide chain release factor 1 [Escherichia coli KTE181]
gi|430963546|gb|ELC81131.1| peptide chain release factor 1 [Escherichia coli KTE188]
gi|430967666|gb|ELC85013.1| peptide chain release factor 1 [Escherichia coli KTE189]
gi|430974379|gb|ELC91312.1| peptide chain release factor 1 [Escherichia coli KTE191]
gi|430981815|gb|ELC98535.1| peptide chain release factor 1 [Escherichia coli KTE193]
gi|430983756|gb|ELD00412.1| peptide chain release factor 1 [Escherichia coli KTE201]
gi|430989878|gb|ELD06324.1| peptide chain release factor 1 [Escherichia coli KTE204]
gi|430995238|gb|ELD11536.1| peptide chain release factor 1 [Escherichia coli KTE205]
gi|430998956|gb|ELD15154.1| peptide chain release factor 1 [Escherichia coli KTE206]
gi|431007356|gb|ELD22168.1| peptide chain release factor 1 [Escherichia coli KTE208]
gi|431009560|gb|ELD24180.1| peptide chain release factor 1 [Escherichia coli KTE210]
gi|431017497|gb|ELD31007.1| peptide chain release factor 1 [Escherichia coli KTE212]
gi|431022396|gb|ELD35662.1| peptide chain release factor 1 [Escherichia coli KTE213]
gi|431026349|gb|ELD39422.1| peptide chain release factor 1 [Escherichia coli KTE214]
gi|431030382|gb|ELD43396.1| peptide chain release factor 1 [Escherichia coli KTE216]
gi|431040847|gb|ELD51381.1| peptide chain release factor 1 [Escherichia coli KTE220]
gi|431043356|gb|ELD53688.1| peptide chain release factor 1 [Escherichia coli KTE224]
gi|431052605|gb|ELD62253.1| peptide chain release factor 1 [Escherichia coli KTE228]
gi|431053546|gb|ELD63151.1| peptide chain release factor 1 [Escherichia coli KTE230]
gi|431056000|gb|ELD65528.1| peptide chain release factor 1 [Escherichia coli KTE233]
gi|431062544|gb|ELD71812.1| peptide chain release factor 1 [Escherichia coli KTE234]
gi|431070953|gb|ELD79109.1| peptide chain release factor 1 [Escherichia coli KTE235]
gi|431086011|gb|ELD92115.1| peptide chain release factor 1 [Escherichia coli KTE47]
gi|431093193|gb|ELD98863.1| peptide chain release factor 1 [Escherichia coli KTE49]
gi|431096764|gb|ELE02225.1| peptide chain release factor 1 [Escherichia coli KTE51]
gi|431101438|gb|ELE06354.1| peptide chain release factor 1 [Escherichia coli KTE53]
gi|431107290|gb|ELE11476.1| peptide chain release factor 1 [Escherichia coli KTE56]
gi|431109569|gb|ELE13520.1| peptide chain release factor 1 [Escherichia coli KTE55]
gi|431118380|gb|ELE21400.1| peptide chain release factor 1 [Escherichia coli KTE57]
gi|431121567|gb|ELE24447.1| peptide chain release factor 1 [Escherichia coli KTE58]
gi|431131229|gb|ELE33308.1| peptide chain release factor 1 [Escherichia coli KTE60]
gi|431131640|gb|ELE33657.1| peptide chain release factor 1 [Escherichia coli KTE62]
gi|431139466|gb|ELE41262.1| peptide chain release factor 1 [Escherichia coli KTE67]
gi|431142654|gb|ELE44402.1| peptide chain release factor 1 [Escherichia coli KTE66]
gi|431149693|gb|ELE50758.1| peptide chain release factor 1 [Escherichia coli KTE72]
gi|431156046|gb|ELE56787.1| peptide chain release factor 1 [Escherichia coli KTE75]
gi|431164732|gb|ELE65123.1| peptide chain release factor 1 [Escherichia coli KTE77]
gi|431172581|gb|ELE72718.1| peptide chain release factor 1 [Escherichia coli KTE80]
gi|431173346|gb|ELE73427.1| peptide chain release factor 1 [Escherichia coli KTE81]
gi|431181837|gb|ELE81698.1| peptide chain release factor 1 [Escherichia coli KTE86]
gi|431182778|gb|ELE82594.1| peptide chain release factor 1 [Escherichia coli KTE83]
gi|431192425|gb|ELE91775.1| peptide chain release factor 1 [Escherichia coli KTE87]
gi|431193100|gb|ELE92437.1| peptide chain release factor 1 [Escherichia coli KTE93]
gi|431202281|gb|ELF00977.1| peptide chain release factor 1 [Escherichia coli KTE111]
gi|431202416|gb|ELF01102.1| peptide chain release factor 1 [Escherichia coli KTE116]
gi|431212666|gb|ELF10593.1| peptide chain release factor 1 [Escherichia coli KTE119]
gi|431216715|gb|ELF14312.1| peptide chain release factor 1 [Escherichia coli KTE142]
gi|431223586|gb|ELF20833.1| peptide chain release factor 1 [Escherichia coli KTE156]
gi|431223864|gb|ELF21110.1| peptide chain release factor 1 [Escherichia coli KTE143]
gi|431228724|gb|ELF25393.1| peptide chain release factor 1 [Escherichia coli KTE161]
gi|431235435|gb|ELF30686.1| peptide chain release factor 1 [Escherichia coli KTE162]
gi|431245233|gb|ELF39527.1| peptide chain release factor 1 [Escherichia coli KTE169]
gi|431245629|gb|ELF39914.1| peptide chain release factor 1 [Escherichia coli KTE171]
gi|431250808|gb|ELF44867.1| peptide chain release factor 1 [Escherichia coli KTE6]
gi|431258040|gb|ELF50826.1| peptide chain release factor 1 [Escherichia coli KTE8]
gi|431265330|gb|ELF57027.1| peptide chain release factor 1 [Escherichia coli KTE9]
gi|431267813|gb|ELF59330.1| peptide chain release factor 1 [Escherichia coli KTE17]
gi|431275112|gb|ELF66157.1| peptide chain release factor 1 [Escherichia coli KTE18]
gi|431277074|gb|ELF68089.1| peptide chain release factor 1 [Escherichia coli KTE45]
gi|431285070|gb|ELF75911.1| peptide chain release factor 1 [Escherichia coli KTE42]
gi|431285602|gb|ELF76438.1| peptide chain release factor 1 [Escherichia coli KTE23]
gi|431292837|gb|ELF83219.1| peptide chain release factor 1 [Escherichia coli KTE43]
gi|431298952|gb|ELF88576.1| peptide chain release factor 1 [Escherichia coli KTE29]
gi|431304568|gb|ELF93097.1| peptide chain release factor 1 [Escherichia coli KTE22]
gi|431310409|gb|ELF98601.1| peptide chain release factor 1 [Escherichia coli KTE46]
gi|431312398|gb|ELG00402.1| peptide chain release factor 1 [Escherichia coli KTE48]
gi|431317497|gb|ELG05277.1| peptide chain release factor 1 [Escherichia coli KTE50]
gi|431319717|gb|ELG07387.1| peptide chain release factor 1 [Escherichia coli KTE54]
gi|431329058|gb|ELG16361.1| peptide chain release factor 1 [Escherichia coli KTE59]
gi|431330551|gb|ELG17818.1| peptide chain release factor 1 [Escherichia coli KTE63]
gi|431340113|gb|ELG27153.1| peptide chain release factor 1 [Escherichia coli KTE65]
gi|431341041|gb|ELG28061.1| peptide chain release factor 1 [Escherichia coli KTE78]
gi|431344575|gb|ELG31513.1| peptide chain release factor 1 [Escherichia coli KTE79]
gi|431349607|gb|ELG36436.1| peptide chain release factor 1 [Escherichia coli KTE84]
gi|431355651|gb|ELG42355.1| peptide chain release factor 1 [Escherichia coli KTE101]
gi|431356920|gb|ELG43610.1| peptide chain release factor 1 [Escherichia coli KTE91]
gi|431369643|gb|ELG55864.1| peptide chain release factor 1 [Escherichia coli KTE118]
gi|431373783|gb|ELG59386.1| peptide chain release factor 1 [Escherichia coli KTE123]
gi|431379029|gb|ELG64018.1| peptide chain release factor 1 [Escherichia coli KTE135]
gi|431387142|gb|ELG71095.1| peptide chain release factor 1 [Escherichia coli KTE136]
gi|431390334|gb|ELG74037.1| peptide chain release factor 1 [Escherichia coli KTE140]
gi|431395924|gb|ELG79412.1| peptide chain release factor 1 [Escherichia coli KTE141]
gi|431401113|gb|ELG84465.1| peptide chain release factor 1 [Escherichia coli KTE144]
gi|431403767|gb|ELG87034.1| peptide chain release factor 1 [Escherichia coli KTE147]
gi|431407027|gb|ELG90246.1| peptide chain release factor 1 [Escherichia coli KTE146]
gi|431413138|gb|ELG95937.1| peptide chain release factor 1 [Escherichia coli KTE154]
gi|431417877|gb|ELH00305.1| peptide chain release factor 1 [Escherichia coli KTE158]
gi|431423347|gb|ELH05474.1| peptide chain release factor 1 [Escherichia coli KTE165]
gi|431428815|gb|ELH10756.1| peptide chain release factor 1 [Escherichia coli KTE192]
gi|431433950|gb|ELH15603.1| peptide chain release factor 1 [Escherichia coli KTE194]
gi|431442723|gb|ELH23810.1| peptide chain release factor 1 [Escherichia coli KTE190]
gi|431445672|gb|ELH26595.1| peptide chain release factor 1 [Escherichia coli KTE173]
gi|431446950|gb|ELH27693.1| peptide chain release factor 1 [Escherichia coli KTE175]
gi|431455388|gb|ELH35744.1| peptide chain release factor 1 [Escherichia coli KTE184]
gi|431461862|gb|ELH42129.1| peptide chain release factor 1 [Escherichia coli KTE196]
gi|431465209|gb|ELH45320.1| peptide chain release factor 1 [Escherichia coli KTE183]
gi|431469776|gb|ELH49705.1| peptide chain release factor 1 [Escherichia coli KTE197]
gi|431473303|gb|ELH53137.1| peptide chain release factor 1 [Escherichia coli KTE203]
gi|431477975|gb|ELH57737.1| peptide chain release factor 1 [Escherichia coli KTE202]
gi|431481419|gb|ELH61133.1| peptide chain release factor 1 [Escherichia coli KTE209]
gi|431484462|gb|ELH64142.1| peptide chain release factor 1 [Escherichia coli KTE207]
gi|431493626|gb|ELH73220.1| peptide chain release factor 1 [Escherichia coli KTE211]
gi|431497198|gb|ELH76776.1| peptide chain release factor 1 [Escherichia coli KTE217]
gi|431502474|gb|ELH81365.1| peptide chain release factor 1 [Escherichia coli KTE215]
gi|431509177|gb|ELH87448.1| peptide chain release factor 1 [Escherichia coli KTE218]
gi|431511861|gb|ELH89990.1| peptide chain release factor 1 [Escherichia coli KTE223]
gi|431516314|gb|ELH93926.1| peptide chain release factor 1 [Escherichia coli KTE229]
gi|431516742|gb|ELH94346.1| peptide chain release factor 1 [Escherichia coli KTE227]
gi|431533234|gb|ELI09735.1| peptide chain release factor 1 [Escherichia coli KTE104]
gi|431535025|gb|ELI11411.1| peptide chain release factor 1 [Escherichia coli KTE105]
gi|431544386|gb|ELI19206.1| peptide chain release factor 1 [Escherichia coli KTE109]
gi|431553208|gb|ELI27137.1| peptide chain release factor 1 [Escherichia coli KTE113]
gi|431557618|gb|ELI31322.1| peptide chain release factor 1 [Escherichia coli KTE112]
gi|431558897|gb|ELI32480.1| peptide chain release factor 1 [Escherichia coli KTE117]
gi|431569826|gb|ELI42762.1| peptide chain release factor 1 [Escherichia coli KTE120]
gi|431572684|gb|ELI45509.1| peptide chain release factor 1 [Escherichia coli KTE124]
gi|431573866|gb|ELI46656.1| peptide chain release factor 1 [Escherichia coli KTE122]
gi|431585382|gb|ELI57333.1| peptide chain release factor 1 [Escherichia coli KTE125]
gi|431588250|gb|ELI59537.1| peptide chain release factor 1 [Escherichia coli KTE128]
gi|431591048|gb|ELI62050.1| peptide chain release factor 1 [Escherichia coli KTE129]
gi|431599157|gb|ELI68867.1| peptide chain release factor 1 [Escherichia coli KTE131]
gi|431604956|gb|ELI74357.1| peptide chain release factor 1 [Escherichia coli KTE133]
gi|431608133|gb|ELI77482.1| peptide chain release factor 1 [Escherichia coli KTE137]
gi|431613055|gb|ELI82260.1| peptide chain release factor 1 [Escherichia coli KTE138]
gi|431618497|gb|ELI87470.1| peptide chain release factor 1 [Escherichia coli KTE139]
gi|431621405|gb|ELI90217.1| peptide chain release factor 1 [Escherichia coli KTE145]
gi|431629959|gb|ELI98304.1| peptide chain release factor 1 [Escherichia coli KTE150]
gi|431631923|gb|ELJ00228.1| peptide chain release factor 1 [Escherichia coli KTE148]
gi|431635972|gb|ELJ04140.1| peptide chain release factor 1 [Escherichia coli KTE153]
gi|431648423|gb|ELJ15820.1| peptide chain release factor 1 [Escherichia coli KTE160]
gi|431649976|gb|ELJ17315.1| peptide chain release factor 1 [Escherichia coli KTE163]
gi|431660400|gb|ELJ27274.1| peptide chain release factor 1 [Escherichia coli KTE166]
gi|431663641|gb|ELJ30399.1| peptide chain release factor 1 [Escherichia coli KTE167]
gi|431664476|gb|ELJ31214.1| peptide chain release factor 1 [Escherichia coli KTE168]
gi|431673803|gb|ELJ39993.1| peptide chain release factor 1 [Escherichia coli KTE174]
gi|431676644|gb|ELJ42728.1| peptide chain release factor 1 [Escherichia coli KTE176]
gi|431680461|gb|ELJ46292.1| peptide chain release factor 1 [Escherichia coli KTE177]
gi|431690573|gb|ELJ56051.1| peptide chain release factor 1 [Escherichia coli KTE179]
gi|431691715|gb|ELJ57167.1| peptide chain release factor 1 [Escherichia coli KTE180]
gi|431695007|gb|ELJ60344.1| peptide chain release factor 1 [Escherichia coli KTE232]
gi|431707383|gb|ELJ71917.1| peptide chain release factor 1 [Escherichia coli KTE88]
gi|431707993|gb|ELJ72519.1| peptide chain release factor 1 [Escherichia coli KTE82]
gi|431710272|gb|ELJ74700.1| peptide chain release factor 1 [Escherichia coli KTE85]
gi|431719285|gb|ELJ83345.1| peptide chain release factor 1 [Escherichia coli KTE90]
gi|431724093|gb|ELJ88034.1| peptide chain release factor 1 [Escherichia coli KTE94]
gi|431724303|gb|ELJ88229.1| peptide chain release factor 1 [Escherichia coli KTE95]
gi|431731537|gb|ELJ95037.1| peptide chain release factor 1 [Escherichia coli KTE97]
gi|431735343|gb|ELJ98702.1| peptide chain release factor 1 [Escherichia coli KTE99]
gi|432348666|gb|ELL43109.1| peptide chain release factor 1 [Escherichia coli J96]
gi|441651949|emb|CCQ02451.1| Peptide chain release factor 1 [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|441711091|emb|CCQ08361.1| Peptide chain release factor 1 [Escherichia coli Nissle 1917]
gi|443421811|gb|AGC86715.1| peptide chain release factor 1 [Escherichia coli APEC O78]
gi|444540950|gb|ELV20540.1| peptide chain release factor 1 [Escherichia coli 99.0814]
gi|444545507|gb|ELV24392.1| peptide chain release factor 1 [Escherichia coli 09BKT078844]
gi|444549914|gb|ELV28085.1| peptide chain release factor 1 [Escherichia coli 99.0815]
gi|444561996|gb|ELV39096.1| peptide chain release factor 1 [Escherichia coli 99.0839]
gi|444563328|gb|ELV40341.1| peptide chain release factor 1 [Escherichia coli 99.0816]
gi|444567733|gb|ELV44462.1| peptide chain release factor 1 [Escherichia coli 99.0848]
gi|444578241|gb|ELV54320.1| peptide chain release factor 1 [Escherichia coli 99.1753]
gi|444583475|gb|ELV59190.1| peptide chain release factor 1 [Escherichia coli 99.1793]
gi|444597135|gb|ELV72163.1| peptide chain release factor 1 [Escherichia coli PA11]
gi|444597230|gb|ELV72252.1| peptide chain release factor 1 [Escherichia coli ATCC 700728]
gi|444601598|gb|ELV76382.1| peptide chain release factor 1 [Escherichia coli 99.1805]
gi|444610967|gb|ELV85337.1| peptide chain release factor 1 [Escherichia coli PA19]
gi|444611006|gb|ELV85373.1| peptide chain release factor 1 [Escherichia coli PA13]
gi|444619063|gb|ELV93123.1| peptide chain release factor 1 [Escherichia coli PA2]
gi|444628444|gb|ELW02182.1| peptide chain release factor 1 [Escherichia coli PA48]
gi|444629132|gb|ELW02849.1| peptide chain release factor 1 [Escherichia coli PA47]
gi|444633891|gb|ELW07388.1| peptide chain release factor 1 [Escherichia coli PA8]
gi|444643786|gb|ELW16913.1| peptide chain release factor 1 [Escherichia coli 7.1982]
gi|444646824|gb|ELW19824.1| peptide chain release factor 1 [Escherichia coli 99.1781]
gi|444649837|gb|ELW22708.1| peptide chain release factor 1 [Escherichia coli 99.1762]
gi|444658674|gb|ELW31113.1| peptide chain release factor 1 [Escherichia coli PA35]
gi|444670283|gb|ELW42200.1| peptide chain release factor 1 [Escherichia coli 95.0083]
gi|444672390|gb|ELW44113.1| peptide chain release factor 1 [Escherichia coli 99.0670]
gi|449320800|gb|EMD10825.1| peptide chain release factor 1 [Escherichia coli O08]
gi|449323173|gb|EMD13138.1| peptide chain release factor 1 [Escherichia coli SEPT362]
gi|449323308|gb|EMD13272.1| peptide chain release factor 1 [Escherichia coli S17]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a]
gi|254790882|sp|B7MTZ5.1|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|386280299|ref|ZP_10057967.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
gi|386122675|gb|EIG71284.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|422805358|ref|ZP_16853790.1| peptide chain release [Escherichia fergusonii B253]
gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253]
Length = 360
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter daltonii FRC-32]
gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter daltonii FRC-32]
Length = 356
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 220/307 (71%), Gaps = 1/307 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ K+E+ +R +EL+ LL+ V N ++ K REH L +V+ Y NYK+I +I
Sbjct: 1 MLFDKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIE 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
+E+L D EM+ A E+ +K+ +E EIK L+LPKD ND +++ +EIRAGTGGDE
Sbjct: 61 GNRELLADPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY RF+E N W+ E+IS S SE GG+KE++A + G V++KLK+ESG HR
Sbjct: 121 AALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE QGRIHTSACTVA++PEA+++ DI+INP DL+ID YR+SGAGGQH+N TDSA
Sbjct: 181 VQRVPETEAQGRIHTSACTVAIMPEAEDV-DIDINPTDLKIDVYRSSGAGGQHVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITH+PTG VV CQ +RSQ KN+A A+K+L RI D+ L+EQ + A R+ +GS +
Sbjct: 240 VRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDNILQEQNAKLAADRKQQVGSGDR 299
Query: 304 KSPLNIF 310
+ +
Sbjct: 300 SERIRTY 306
>gi|417842059|ref|ZP_12488154.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19501]
gi|341947839|gb|EGT74480.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19501]
Length = 361
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + +RR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDIRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|386265998|ref|YP_005829490.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
Length = 361
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+P+ E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor
Methylation By Prmc
Length = 360
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E ++NPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
19194]
gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
19194]
Length = 362
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K R+ ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I RI G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|345877352|ref|ZP_08829103.1| UDP-glucose 6-dehydrogenase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344225663|gb|EGV52015.1| UDP-glucose 6-dehydrogenase [endosymbiont of Riftia pachyptila
(vent Ph05)]
Length = 359
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE+ + R +E+ LL EV N+ + RE++ L P+VE Y + +
Sbjct: 1 MKPSLRGKLEQIADRFEEITALLADPEVQNDQNQFRDLSREYAQLEPVVESYRRFSQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI +A+EML D EM A +E+ A+ +E E++ L++P D ND+RNIF+EIRAGTG
Sbjct: 61 DIESAQEMLADPEMAELAAEELAEAEHTRDLLEPELQLLLIPADPNDQRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DL RMY+R+SE W+ E IS S E GGYKEII RI G VYS+LKFESG
Sbjct: 121 GAEAALFAGDLYRMYLRYSETLGWQTETISESPGEHGGYKEIICRISGNAVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PEAD I+++ IN DLRIDTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESQGRIHTSACTVAILPEADAIDEVEINSNDLRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV++CQ++RSQHKNKA A+ +L AR+ Q S A+ R+L +GS
Sbjct: 241 DSAVRITHLPTGIVIECQDERSQHKNKARAMSLLSARLLSQAQEAQSSAQAQNRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|119361546|sp|Q4QKS1.2|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 1 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
Length = 360
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
Length = 361
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|419925391|ref|ZP_14443231.1| peptide chain release factor 1 [Escherichia coli 541-15]
gi|388386519|gb|EIL48162.1| peptide chain release factor 1 [Escherichia coli 541-15]
Length = 360
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ ++ +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLKQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|410635725|ref|ZP_11346333.1| peptide chain release factor 1 [Glaciecola lipolytica E3]
gi|410144808|dbj|GAC13538.1| peptide chain release factor 1 [Glaciecola lipolytica E3]
Length = 362
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +E+ LL+ E+ + + + +E+S L +V+ + Y++ +
Sbjct: 1 MKDSVVSKLETLVERFEEVQALLSNAEIIADQEKFRALSKEYSQLEDVVKAFQQYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EM+ +D EMR A +E +AK I +E E++ L+LP+D ND N F+EIRAG
Sbjct: 61 DLQSAQEMMQEDDAEMREMAQEEYKVAKASIESLEGELQILLLPRDPNDDSNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+I+ + E GGYKE++A IIG VY +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETQGWRLELINANEGEHGGYKEVVANIIGDGVYGIMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E I INPADLRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPESEAIEINPADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L +R+ + ++ + A RR L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSVLQSRLNQIEDDKRTAEEASTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
Length = 360
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL + N+ + +E++ L +V +N +KK++
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + +Q A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|415841400|ref|ZP_11522471.1| peptide chain release factor 1 [Escherichia coli RN587/1]
gi|417283933|ref|ZP_12071230.1| peptide chain release factor 1 [Escherichia coli 3003]
gi|425277335|ref|ZP_18668636.1| peptide chain release factor 1 [Escherichia coli ARS4.2123]
gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1]
gi|386243876|gb|EII85609.1| peptide chain release factor 1 [Escherichia coli 3003]
gi|408204887|gb|EKI29793.1| peptide chain release factor 1 [Escherichia coli ARS4.2123]
Length = 360
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LP+D +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPRDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|442590633|ref|ZP_21009392.1| Peptide chain release factor 1 [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441608901|emb|CCP95305.1| Peptide chain release factor 1 [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
Length = 360
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEVLHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|417842651|ref|ZP_12488732.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21127]
gi|341951210|gb|EGT77787.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21127]
Length = 361
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKE+I ++ G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+PKTE+QGRIHTSACTVAV+PE E E INP DLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRIPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|403052585|ref|ZP_10907069.1| peptide chain release factor 1 [Acinetobacter bereziniae LMG 1003]
gi|445414455|ref|ZP_21433979.1| peptide chain release factor 1 [Acinetobacter sp. WC-743]
gi|444764402|gb|ELW88716.1| peptide chain release factor 1 [Acinetobacter sp. WC-743]
Length = 362
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL+ LL EV ++ K + REH+ L I E++ YK+ E
Sbjct: 1 MKESLRLRLDQLCDRHEELEALLADVEVISDNKRFRNLSREHNDLSEITEVWKKYKQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML D + ++ A++EI K I +E E+ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAEVMLTDPDFKDMAVEEIKENKALIEQLESELNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKEII + G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESQNWRIEILSENEGEHGGYKEIICLVNGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ++RSQHKNKA A+ +L +R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQDERSQHKNKAKAMALLASRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
Length = 363
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 154/315 (48%), Positives = 221/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK + +L+ F++R +EL LL EV +DY RE++ L +V + +Y+
Sbjct: 1 MKASLRQRLDTFAERFEELAALLADPEVIADQPRFRDYS---REYAELDDLVAAWRDYRA 57
Query: 58 INEDIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ EDI A+ + +D EMR A E ++++ +E +K+L++P+D +D N+F+EI
Sbjct: 58 VEEDIEAAESLADDADAEMRELASMERESGREKLEALETRLKQLLVPRDPDDAGNVFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+ALF DL RMY R++E + WK EI+S S + GGYKE+I+R+ G VY++L
Sbjct: 118 RAGTGGDEAALFAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRVKGEGVYARL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PEA E+ +I+I+P +LR+DT+RASGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDTFRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+N TDSA+RITH+P+G+VV+CQ +RSQHKN+A A+ +L AR+K + Q+ A RR
Sbjct: 238 HVNTTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQRQQQADERR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 360
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL + ++ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|392548988|ref|ZP_10296125.1| peptide chain release factor 1 [Pseudoalteromonas rubra ATCC 29570]
Length = 361
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E++ +L EV + + +E+S L +V+ + Y++ E
Sbjct: 1 MKESVYRKLETLVERHEEVEAMLGDPEVIGDQNRFRALSKEYSELEDVVKAFTAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+EML +D +MR A +E AK++I ++E +++ L+LPKD D N+F+E+RAG
Sbjct: 61 NVAAAEEMLKDSDPDMREMAQEEFKDAKEQISELEEQLQILMLPKDPKDDNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E++S + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEAQKWQVEVVSANEGEHGGYKEVIANIKGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I INP+DL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINPSDLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A AL +L AR++ ++ ++Q+ A RR L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKALSVLGARLQQAEDEKRQAEEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
gi|452745893|ref|ZP_21945725.1| peptide chain release factor 1 [Mannheimia haemolytica serotype 6
str. H23]
gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
gi|452086032|gb|EME02423.1| peptide chain release factor 1 [Mannheimia haemolytica serotype 6
str. H23]
Length = 360
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL + ++ + +E+S L +V +N +KK+N
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I ++E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
MBEL55E]
gi|61214602|sp|Q65TB1.1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
Length = 360
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ ++R +EL+ LL V ++ + +E+S L +V+ ++ +K++N
Sbjct: 1 MKPSIISKLDSLNERYEELEALLGDASVISDQDKFRAYSKEYSQLEEVVKTFSRWKQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K + ++E ++ L+LP+D ND+ N ++EIRAGTG
Sbjct: 61 NIEEAELLLDDPEMKEMAQMEIEESKNELEEVEQHLQILLLPRDPNDEYNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKEIIA + G NVY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALVSGDNVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ ++ + + A RR L+GS
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKLAAEQATTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718]
gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718]
Length = 360
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R+++ W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
Length = 360
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/310 (52%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +EL LL + N+ + +E++ L +V +N +KK++
Sbjct: 1 MKDSIINKLESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M++ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAQILLDDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + +Q A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866]
Length = 361
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W E++S + SE GG+KEII + G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q + MRR L+GS
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGS 301
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 302 GDRSDKIRTY 311
>gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666]
gi|119361575|sp|Q12F86.1|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp.
JS666]
Length = 373
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 218/320 (68%), Gaps = 10/320 (3%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + L++ RL ELD LL+ +V +++ + REH+ + E Y
Sbjct: 1 MKPFLRQTLDRQLLRLHELDSLLSATDVVSDLDRFRALTREHAEASVVAEQYTRLTSREA 60
Query: 61 DIITAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
D+ +A+ ML +D EM A +EI AK I ++ ++ +++PKD +D R FIEIR
Sbjct: 61 DLASAEGMLAEAKDDPEMAAMAEEEIAAAKLDIAQLDEALQLMLIPKDPDDARAAFIEIR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI------IGLN 170
AGTGGDESALF DL RMY RF+ERN W+ EIIS S SE+GGYKE++ R+ G+
Sbjct: 121 AGTGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRMDGPTDATGVG 180
Query: 171 VYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRAS 230
VY KL+FESG HRVQRVP TETQGRIHTSACTVAV+PE DE I INPADLRIDTYRAS
Sbjct: 181 VYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPADLRIDTYRAS 240
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNT 290
GAGGQHINKTDSAVRITHIPTGIV +CQ+DRSQH+NKA AL++L ARI + E+ +
Sbjct: 241 GAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIVEKDRSERAAKD 300
Query: 291 AKMRRLLIGSVQKKSPLNIF 310
A MR+ L+GS + + +
Sbjct: 301 AAMRKGLVGSGDRSDRIRTY 320
>gi|432542646|ref|ZP_19779498.1| peptide chain release factor 1 [Escherichia coli KTE236]
gi|432548120|ref|ZP_19784904.1| peptide chain release factor 1 [Escherichia coli KTE237]
gi|432621394|ref|ZP_19857433.1| peptide chain release factor 1 [Escherichia coli KTE76]
gi|432814834|ref|ZP_20048623.1| peptide chain release factor 1 [Escherichia coli KTE115]
gi|431076070|gb|ELD83584.1| peptide chain release factor 1 [Escherichia coli KTE236]
gi|431082889|gb|ELD89200.1| peptide chain release factor 1 [Escherichia coli KTE237]
gi|431161072|gb|ELE61568.1| peptide chain release factor 1 [Escherichia coli KTE76]
gi|431365780|gb|ELG52284.1| peptide chain release factor 1 [Escherichia coli KTE115]
Length = 360
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDVVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|388259168|ref|ZP_10136342.1| peptide chain release factor 1 [Cellvibrio sp. BR]
gi|387937126|gb|EIK43683.1| peptide chain release factor 1 [Cellvibrio sp. BR]
Length = 360
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ +R +E+ +L++ ++ NN + +E++ L P+V+ Y NY +
Sbjct: 1 MKASILEKLDRLKERYEEVSAMLSEADIINNQNRFRDLSKEYAELEPVVQGYQNYLNLLA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I AK +L D +M+ A +E+ + ++ ++LE++KL+LPKD ND++N ++EIRAG
Sbjct: 61 NIEEAKHLLVDGDDDMKEMAEEELKDCEAQLEPMQLELQKLLLPKDPNDEKNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E++S++ E GG+KEII + G VYSKLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAETQGWRVEVLSQNEGEHGGFKEIITLVSGQGVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE+E+ININ ADLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEMEEININKADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RI H+PTG+V++CQ++RSQHKN+A A+ +L ++K + + + RR L+
Sbjct: 241 KTDSAIRIVHLPTGLVIECQDERSQHKNRARAMSLLATKLKTMQEDAAHKSLSDERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|433023079|ref|ZP_20211087.1| peptide chain release factor 1 [Escherichia coli KTE106]
gi|431538580|gb|ELI14564.1| peptide chain release factor 1 [Escherichia coli KTE106]
Length = 360
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+C+++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECEDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|359429606|ref|ZP_09220630.1| peptide chain release factor 1 [Acinetobacter sp. NBRC 100985]
gi|358235067|dbj|GAB02169.1| peptide chain release factor 1 [Acinetobacter sp. NBRC 100985]
Length = 362
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWAKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + D+E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIKENKSLLVDLEDQLNVLMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
TW-7]
gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
TW-7]
Length = 361
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + Y++ E
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D +MR A +E AK +I +E EI+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+E WK E+++ + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|359435121|ref|ZP_09225350.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20652]
gi|357918258|dbj|GAA61599.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20652]
Length = 361
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + YK+ +
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLTYKETQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D EMR A +E AK +I IE +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E++S + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ+ RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRDLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|416269094|ref|ZP_11642353.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
Length = 360
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGCLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|359442056|ref|ZP_09231936.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20429]
gi|392535322|ref|ZP_10282459.1| peptide chain release factor 1 [Pseudoalteromonas arctica A 37-1-2]
gi|358036068|dbj|GAA68185.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20429]
Length = 361
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + YK+ +
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLTYKETQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D EMR A +E AK +I IE +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E++S + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ+ RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRDLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 360
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ E
Sbjct: 1 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKGDQLEQQLQILLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
gi|365137738|ref|ZP_09344450.1| peptide chain release factor 1 [Klebsiella sp. 4_1_44FAA]
gi|378979392|ref|YP_005227533.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386035378|ref|YP_005955291.1| peptide chain release factor 1 [Klebsiella pneumoniae KCTC 2242]
gi|419763600|ref|ZP_14289843.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|419976506|ref|ZP_14491902.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979693|ref|ZP_14494983.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987575|ref|ZP_14502692.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419993294|ref|ZP_14508238.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999486|ref|ZP_14514260.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003167|ref|ZP_14517814.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420008663|ref|ZP_14523151.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015255|ref|ZP_14529557.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020553|ref|ZP_14534740.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420026244|ref|ZP_14540248.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031897|ref|ZP_14545715.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037736|ref|ZP_14551388.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420043319|ref|ZP_14556807.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420049460|ref|ZP_14562768.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420054934|ref|ZP_14568104.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420062638|ref|ZP_14575604.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066671|ref|ZP_14579470.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074466|ref|ZP_14587072.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420080015|ref|ZP_14592450.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084801|ref|ZP_14597049.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421910671|ref|ZP_16340447.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421915833|ref|ZP_16345426.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424831173|ref|ZP_18255901.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932897|ref|ZP_18351269.1| Peptide chain release factor 1 (RF-1) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425076192|ref|ZP_18479295.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425082074|ref|ZP_18485171.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425086825|ref|ZP_18489918.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428148979|ref|ZP_18996818.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428933235|ref|ZP_19006793.1| peptide chain release factor 1 [Klebsiella pneumoniae JHCK1]
gi|428940519|ref|ZP_19013600.1| peptide chain release factor 1 [Klebsiella pneumoniae VA360]
gi|449061551|ref|ZP_21738958.1| peptide chain release factor 1 [Klebsiella pneumoniae hvKP1]
gi|166223565|sp|A6TAN9.1|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
gi|339762506|gb|AEJ98726.1| peptide chain release factor 1 [Klebsiella pneumoniae KCTC 2242]
gi|363655851|gb|EHL94647.1| peptide chain release factor 1 [Klebsiella sp. 4_1_44FAA]
gi|364518803|gb|AEW61931.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397340445|gb|EJJ33649.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397343990|gb|EJJ37129.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397348514|gb|EJJ41614.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397358027|gb|EJJ50759.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358934|gb|EJJ51642.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370151|gb|EJJ62742.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397376898|gb|EJJ69145.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397382854|gb|EJJ75008.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387884|gb|EJJ79891.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397395870|gb|EJJ87570.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397398800|gb|EJJ90458.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404975|gb|EJJ96454.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397413393|gb|EJK04610.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397414093|gb|EJK05295.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397422199|gb|EJK13176.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427520|gb|EJK18289.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397429559|gb|EJK20273.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435361|gb|EJK25980.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397443052|gb|EJK33392.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397449832|gb|EJK39954.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|397743529|gb|EJK90744.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|405593696|gb|EKB67137.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601300|gb|EKB74454.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405603549|gb|EKB76670.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|407807084|gb|EKF78335.1| Peptide chain release factor 1 (RF-1) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410115442|emb|CCM83072.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121873|emb|CCM88051.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414708606|emb|CCN30310.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302143|gb|EKV64356.1| peptide chain release factor 1 [Klebsiella pneumoniae VA360]
gi|426305732|gb|EKV67848.1| peptide chain release factor 1 [Klebsiella pneumoniae JHCK1]
gi|427541075|emb|CCM92956.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448872917|gb|EMB08052.1| peptide chain release factor 1 [Klebsiella pneumoniae hvKP1]
Length = 360
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ E
Sbjct: 1 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|418295010|ref|ZP_12906885.1| peptide chain release factor 1 [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379066368|gb|EHY79111.1| peptide chain release factor 1 [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 360
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVAEAKSQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPA+LRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGMVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|419401448|ref|ZP_13942175.1| peptide chain release factor 1 [Escherichia coli DEC15C]
gi|378249102|gb|EHY09012.1| peptide chain release factor 1 [Escherichia coli DEC15C]
Length = 360
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+R GTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRVGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|383935144|ref|ZP_09988582.1| peptide chain release factor 1 [Rheinheimera nanhaiensis E407-8]
gi|383703909|dbj|GAB58673.1| peptide chain release factor 1 [Rheinheimera nanhaiensis E407-8]
Length = 363
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ LL+ V ++ + + +E+S L I + + +Y++ +
Sbjct: 1 MKESVYRKLEGLAERYEEVQALLSDASVISDQSKFRELSKEYSQLEDISKAFADYQQAQQ 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EM D EMR A +E A++RI ++ E++ L+LPKD ND N F+EIRAG
Sbjct: 61 DLASAEEMQKDTDPEMREMAQEEYKAARERIEQLDKELQILLLPKDPNDNNNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F D+ RMY RF+E+ WK E+IS S E GGYKEIIA + G Y LKFE
Sbjct: 121 AGGDEAAIFAGDVFRMYSRFAEKQRWKLEVISASDGEHGGYKEIIASVQGEGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I INPADL++DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPESEAIEINPADLKVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTGIVV+CQ++RSQHKN+A A+ +L +RI+ ++ +++ RR L+
Sbjct: 241 RTDSAIRITHLPTGIVVECQDERSQHKNRARAMSVLQSRIQAAEDEKRRLAEESTRRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|409203086|ref|ZP_11231289.1| peptide chain release factor 1 [Pseudoalteromonas flavipulchra JG1]
Length = 362
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ +L+ EV ++ + +E S L +V+ + Y++ E
Sbjct: 1 MKESVYRKLETLVERYEEVQAMLSSPEVISDQNRFRALSKEFSELEDVVKAFTAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TA+EML +D +MR A +E AK I +E +++ L+LPKD D N+F+E+RAG
Sbjct: 61 DVATAEEMLKDSDPDMREMAQEEYKEAKAAIAALEDDLQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETQKWRVEIVSANEGEHGGYKEVIANISGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I INP+DL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINPSDLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A AL +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKALSVLSARLQQAEDEKRAAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|386613624|ref|YP_006133290.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
Length = 360
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +I PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|417596308|ref|ZP_12246961.1| peptide chain release factor 1 [Escherichia coli 3030-1]
gi|345357018|gb|EGW89217.1| peptide chain release factor 1 [Escherichia coli 3030-1]
Length = 360
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPK+ +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKNPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
gi|166223567|sp|A5IED7.1|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
Corby]
gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
Length = 362
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 229/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL++ +R +E+ LL++ + + + +E++ L P+ + Y +Y +
Sbjct: 1 MKKSLELKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKN 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ + E+L +D ++ A +EI++ KK+I +++ +++ ++PKD +D+RNI++E+RAG
Sbjct: 61 NLDSLNELLESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E+IS S E GGYKEIIA+I G VYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE DEI DI INP DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A A+ +L R+ D+++ +Q+ A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSERIRTY 312
>gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF]
gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU]
gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900]
gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
gi|384131295|ref|YP_005513907.1| prfA [Acinetobacter baumannii 1656-2]
gi|384143752|ref|YP_005526462.1| peptide chain release factor 1 [Acinetobacter baumannii MDR-ZJ06]
gi|385238089|ref|YP_005799428.1| peptide chain release factor 1 [Acinetobacter baumannii
TCDC-AB0715]
gi|387123413|ref|YP_006289295.1| peptide chain release factor 1 [Acinetobacter baumannii MDR-TJ]
gi|403674045|ref|ZP_10936321.1| peptide chain release factor 1 [Acinetobacter sp. NCTC 10304]
gi|407933279|ref|YP_006848922.1| peptide chain release factor 1 [Acinetobacter baumannii TYTH-1]
gi|416147766|ref|ZP_11602003.1| peptide chain release factor 1 [Acinetobacter baumannii AB210]
gi|417545760|ref|ZP_12196846.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC032]
gi|417549292|ref|ZP_12200372.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-18]
gi|417567450|ref|ZP_12218322.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC143]
gi|417569306|ref|ZP_12220164.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC189]
gi|417577956|ref|ZP_12228793.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-17]
gi|417868990|ref|ZP_12513985.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH1]
gi|417873948|ref|ZP_12518810.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH2]
gi|417879254|ref|ZP_12523829.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH3]
gi|417881355|ref|ZP_12525679.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH4]
gi|421202679|ref|ZP_15659826.1| peptide chain release factor 1 [Acinetobacter baumannii AC12]
gi|421536122|ref|ZP_15982373.1| peptide chain release factor 1 [Acinetobacter baumannii AC30]
gi|421626411|ref|ZP_16067240.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC098]
gi|421629841|ref|ZP_16070556.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC180]
gi|421651729|ref|ZP_16092096.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC0162]
gi|421653860|ref|ZP_16094191.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-72]
gi|421668082|ref|ZP_16108124.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC087]
gi|421671323|ref|ZP_16111299.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC099]
gi|421675421|ref|ZP_16115342.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC065]
gi|421679694|ref|ZP_16119563.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC111]
gi|421686297|ref|ZP_16126052.1| peptide chain release factor 1 [Acinetobacter baumannii IS-143]
gi|421691722|ref|ZP_16131381.1| peptide chain release factor 1 [Acinetobacter baumannii IS-116]
gi|421695189|ref|ZP_16134803.1| peptide chain release factor 1 [Acinetobacter baumannii WC-692]
gi|421704179|ref|ZP_16143626.1| peptide chain release factor 1 [Acinetobacter baumannii ZWS1122]
gi|421707828|ref|ZP_16147212.1| peptide chain release factor 1 [Acinetobacter baumannii ZWS1219]
gi|421788273|ref|ZP_16224579.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-82]
gi|421792841|ref|ZP_16228986.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-2]
gi|421806865|ref|ZP_16242727.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC035]
gi|424051822|ref|ZP_17789354.1| peptide chain release factor 1 [Acinetobacter baumannii Ab11111]
gi|424059461|ref|ZP_17796952.1| peptide chain release factor 1 [Acinetobacter baumannii Ab33333]
gi|424063371|ref|ZP_17800856.1| peptide chain release factor 1 [Acinetobacter baumannii Ab44444]
gi|425749952|ref|ZP_18867919.1| peptide chain release factor 1 [Acinetobacter baumannii WC-348]
gi|425751167|ref|ZP_18869115.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-113]
gi|445405147|ref|ZP_21431124.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-57]
gi|445450443|ref|ZP_21444501.1| peptide chain release factor 1 [Acinetobacter baumannii WC-A-92]
gi|445460217|ref|ZP_21448126.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC047]
gi|445471265|ref|ZP_21452018.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC338]
gi|445483722|ref|ZP_21456492.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-78]
gi|445492052|ref|ZP_21459999.1| peptide chain release factor 1 [Acinetobacter baumannii AA-014]
gi|238685536|sp|A3M6N7.2|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238688133|sp|B0VM26.1|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690970|sp|B2HU82.1|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii]
gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU]
gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2]
gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii
TCDC-AB0715]
gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
gi|333365361|gb|EGK47375.1| peptide chain release factor 1 [Acinetobacter baumannii AB210]
gi|342229391|gb|EGT94259.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH3]
gi|342230270|gb|EGT95111.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH2]
gi|342231397|gb|EGT96206.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH1]
gi|342239047|gb|EGU03464.1| peptide chain release factor 1 [Acinetobacter baumannii ABNIH4]
gi|347594245|gb|AEP06966.1| peptide chain release factor 1 [Acinetobacter baumannii MDR-ZJ06]
gi|385877905|gb|AFI95000.1| peptide chain release factor 1 [Acinetobacter baumannii MDR-TJ]
gi|395553122|gb|EJG19130.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC143]
gi|395553529|gb|EJG19535.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC189]
gi|395568653|gb|EJG29323.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-17]
gi|398327807|gb|EJN43938.1| peptide chain release factor 1 [Acinetobacter baumannii AC12]
gi|400383648|gb|EJP42326.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC032]
gi|400387260|gb|EJP50333.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-18]
gi|404562331|gb|EKA67555.1| peptide chain release factor 1 [Acinetobacter baumannii IS-116]
gi|404566757|gb|EKA71899.1| peptide chain release factor 1 [Acinetobacter baumannii WC-692]
gi|404568899|gb|EKA73994.1| peptide chain release factor 1 [Acinetobacter baumannii IS-143]
gi|404665378|gb|EKB33341.1| peptide chain release factor 1 [Acinetobacter baumannii Ab11111]
gi|404670199|gb|EKB38091.1| peptide chain release factor 1 [Acinetobacter baumannii Ab33333]
gi|404674548|gb|EKB42292.1| peptide chain release factor 1 [Acinetobacter baumannii Ab44444]
gi|407190573|gb|EKE61789.1| peptide chain release factor 1 [Acinetobacter baumannii ZWS1122]
gi|407191328|gb|EKE62530.1| peptide chain release factor 1 [Acinetobacter baumannii ZWS1219]
gi|407901860|gb|AFU38691.1| peptide chain release factor 1 [Acinetobacter baumannii TYTH-1]
gi|408507662|gb|EKK09356.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC0162]
gi|408511710|gb|EKK13357.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-72]
gi|408695682|gb|EKL41237.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC098]
gi|408699190|gb|EKL44670.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC180]
gi|409985932|gb|EKO42134.1| peptide chain release factor 1 [Acinetobacter baumannii AC30]
gi|410381059|gb|EKP33633.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC087]
gi|410382352|gb|EKP34906.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC065]
gi|410382640|gb|EKP35185.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC099]
gi|410390870|gb|EKP43250.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC111]
gi|410398932|gb|EKP51135.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-2]
gi|410403583|gb|EKP55671.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-82]
gi|410417408|gb|EKP69178.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC035]
gi|425487354|gb|EKU53712.1| peptide chain release factor 1 [Acinetobacter baumannii WC-348]
gi|425500110|gb|EKU66135.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-113]
gi|444755887|gb|ELW80453.1| peptide chain release factor 1 [Acinetobacter baumannii WC-A-92]
gi|444763291|gb|ELW87627.1| peptide chain release factor 1 [Acinetobacter baumannii AA-014]
gi|444768290|gb|ELW92507.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-78]
gi|444772005|gb|ELW96129.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC338]
gi|444773452|gb|ELW97548.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC047]
gi|444781897|gb|ELX05808.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-57]
gi|452955982|gb|EME61376.1| peptide chain release factor 1 [Acinetobacter baumannii MSP4-16]
Length = 362
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
Length = 361
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+K + R +EL LL+ +V N + RE++ + P+V+ Y Y + +
Sbjct: 1 MKASLQGKLDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAAD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ M +D + MR +E A+ R+ ++ E++KL+LPKD D N+F+E+RAG
Sbjct: 61 NLDAARAMQDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++++ WK E++S S E GGYKE+IAR+IG VYS++KFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++ EA+++ DI I DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV+CQ++RSQHKNKA A+ +L A++ D++ + A R+ L+
Sbjct: 241 TTDSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|392550477|ref|ZP_10297614.1| peptide chain release factor 1 [Pseudoalteromonas spongiae
UST010723-006]
Length = 361
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ +V ++ + +E+S L + + +N Y++ +
Sbjct: 1 MKESVYRKLETLVERYEEVQALLSDPDVISDQDRFRSLSKEYSELEDVTKAFNAYRQAED 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TA+EML ND +MR A +E AK I +E E++ L+LPKD D N+F+E+RAG
Sbjct: 61 DVATAEEMLKDNDPDMREMAQEEFKEAKANIEALEDELQVLMLPKDPRDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK +++S + E GG+KE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETQKWKVDVVSTNEGEHGGFKEVIANISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN +DL+IDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINSSDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKNKA AL +L +R++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNKAKALSVLASRLQQAEDEKRMAEEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|359451794|ref|ZP_09241183.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20480]
gi|358042420|dbj|GAA77432.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20480]
Length = 361
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + ++++ E
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLSFQQTKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D +MR A +E AK +I +E EI+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+E WK E+++ + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895]
gi|166223546|sp|A8AG02.1|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895]
Length = 360
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKGEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea blandensis MED297]
gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
Length = 361
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL + ++R +EL LL+Q +V ++ + + +E++ L +V+ ++ Y
Sbjct: 1 MKDSIHQKLTELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEA 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A+ +L+D +MR DE+ A+ +++ +++ L+LPKD ND +N+++E+RAG
Sbjct: 61 DIEAARGLLDDEDPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ E++S S E GGYKEII+R+ G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE+E I I+ DLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+TH+PTGIVV+CQ++RSQHKNKA A+ +L A++KD++ A R+ L+
Sbjct: 241 KTDSAIRLTHLPTGIVVECQDERSQHKNKARAMSLLAAKLKDAQESAAAREQADQRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|337754685|ref|YP_004647196.1| peptide chain release factor 1 [Francisella sp. TX077308]
gi|336446290|gb|AEI35596.1| Peptide chain release factor 1 [Francisella sp. TX077308]
Length = 361
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ +R +E+ LL + +V ++ + +E+S L PIV+ + Y + E
Sbjct: 1 MKDSIKVKLQSLIERHEEVSVLLGEADVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D A EMLN D E+ A +E+ A + I +E E++ L+LP+D ND NIF+EIRAG
Sbjct: 61 DKEAAYEMLNEKDAELVEMAKEELKSANEAIERLEDELQILLLPRDPNDDANIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL +MY +++E+ WK E+IS S E GGYKEII++I G VYS+LKFE
Sbjct: 121 TGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISKINGDGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PEADE+E I+I+PAD+++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDISPADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L +++ +++ +QQ + R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365834492|ref|ZP_09375938.1| peptide chain release factor 1 [Hafnia alvei ATCC 51873]
gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364569269|gb|EHM46892.1| peptide chain release factor 1 [Hafnia alvei ATCC 51873]
Length = 360
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +EI AK +I D+E +++ L+LPKD +D+R+ ++EIRAGTG
Sbjct: 61 DLSTAEMMLDDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF D+ RMY R++E WK E++S + E GGYKEIIA++IG Y +LKFESG
Sbjct: 121 GDEAALFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQEEASTRRNLLGS 300
>gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135258|ref|YP_004995908.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
gi|427425315|ref|ZP_18915411.1| peptide chain release factor 1 [Acinetobacter baumannii WC-136]
gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
gi|425697806|gb|EKU67466.1| peptide chain release factor 1 [Acinetobacter baumannii WC-136]
Length = 362
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIQANKTLLEELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
gi|452877557|ref|ZP_21954833.1| peptide chain release factor 1 [Pseudomonas aeruginosa VRFPA01]
gi|166223587|sp|A6VC61.1|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
gi|452185686|gb|EME12704.1| peptide chain release factor 1 [Pseudomonas aeruginosa VRFPA01]
Length = 360
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ S R +EL LL EV ++ + RE++ + P++ + +Y+K+
Sbjct: 1 MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D E+R+ A +E+ A++R+ + +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPELRDLAEEEVAEARERLAALGDSLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ E +S + E GGYKE+IAR+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGENVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITH+P+GIVV+CQ +RSQHKN+A A+ L A++ D + Q A R+LL+
Sbjct: 241 KTDSAVRITHLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQAIASTRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|350427219|ref|XP_003494690.1| PREDICTED: peptide chain release factor 1-like [Bombus impatiens]
Length = 361
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 224/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE + +E+ LL++ V ++ + + +E++ L +V ++++K+ E
Sbjct: 1 MKPSIIAKLETLQEHYEEVQALLSEPSVISDQERFRTLSKEYAQLTDVVNCFSDWKQTQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EM A +E+ AK R D+ +++ L+LPKD ND RN F+E+RAGTG
Sbjct: 61 DIETAEMMLDDPEMAEMAQEELQQAKVRELDLANQLQLLLLPKDPNDDRNCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKEII + G Y +KFESG
Sbjct: 121 GDEAAIFAGDLFRMYTRYAESKRWRIEVMSASEGEHGGYKEIILLVSGDGAYGHMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLPEIPEAELPDINPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+D++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIQDAEIQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
gi|424055138|ref|ZP_17792661.1| peptide chain release factor 1 [Acinetobacter nosocomialis Ab22222]
gi|425742448|ref|ZP_18860557.1| peptide chain release factor 1 [Acinetobacter baumannii WC-487]
gi|445430876|ref|ZP_21438635.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC021]
gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
gi|407439063|gb|EKF45605.1| peptide chain release factor 1 [Acinetobacter nosocomialis Ab22222]
gi|425486954|gb|EKU53314.1| peptide chain release factor 1 [Acinetobacter baumannii WC-487]
gi|444760504|gb|ELW84954.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC021]
Length = 362
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 GSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|383760093|ref|YP_005439079.1| peptide chain release factor RF-1 PrfA [Rubrivivax gelatinosus
IL144]
gi|381380763|dbj|BAL97580.1| peptide chain release factor RF-1 PrfA [Rubrivivax gelatinosus
IL144]
Length = 364
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 215/313 (68%), Gaps = 3/313 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + + E+ RL ELD LL +V ++K RE S + +V + Y + +
Sbjct: 1 MNDSLRQRFERLGMRLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQ 60
Query: 61 DIITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D+ A+EML +D EM A E+ A+ + +E E++ ++P+D D RN F+EIRA
Sbjct: 61 DLAAAREMLVAESDAEMAAMAQQEVVDAEADLARLEHELQLALIPRDPEDARNAFVEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDESALF DL RMY+R+ ER W+ E++S S SE+GGYKE++ ++ G +V+ L+F
Sbjct: 121 GTGGDESALFAGDLARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGSDVFGTLRF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESG HRVQRVP TE QGRIHTSACTVAV+PE DE E++ +NPA+LRIDT+RASGAGGQH+
Sbjct: 181 ESGGHRVQRVPATEAQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHV 240
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
NKTDSA+RITH+PTGIV +CQ+DRSQH+NKA A+ +L AR+++ E+ + A R+ L
Sbjct: 241 NKTDSAIRITHLPTGIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEAATRKSL 300
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 301 VGSGDRSDRIRTY 313
>gi|354597469|ref|ZP_09015486.1| Peptide chain release factor 1 [Brenneria sp. EniD312]
gi|353675404|gb|EHD21437.1| Peptide chain release factor 1 [Brenneria sp. EniD312]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + ++++ E
Sbjct: 1 MKLSIVAKLEALQERHEEVQALLGEPNVIADMDRFRALSREYAQLTDITRCFQKWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DIQTAEMMLDDAEMREMAQEELKQAKLTGEELEQQLQLLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E+IS S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEVISASDGEHGGYKEIIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMQRRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
gardneri ATCC 19865]
gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
gardneri ATCC 19865]
Length = 361
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ EV +N + RE S L P+ + +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRTLSRELSQLEPLAVALEDEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M ND EMR A +EI A+ R+ +++ ++ L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRNDPEMRELAEEEIATAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ +++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|433119749|ref|ZP_20305449.1| peptide chain release factor 1 [Escherichia coli KTE157]
gi|431646497|gb|ELJ13990.1| peptide chain release factor 1 [Escherichia coli KTE157]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFE G
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFEYG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKCEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGS 300
>gi|339999607|ref|YP_004730490.1| peptide chain release factor 1 (RF-1) [Salmonella bongori NCTC
12419]
gi|339512968|emb|CCC30712.1| peptide chain release factor 1 (RF-1) [Salmonella bongori NCTC
12419]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA++ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQQMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
gi|392420020|ref|YP_006456624.1| peptide chain release factor 1 [Pseudomonas stutzeri CCUG 29243]
gi|166223591|sp|A4VPB9.1|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
gi|390982208|gb|AFM32201.1| peptide chain release factor 1 [Pseudomonas stutzeri CCUG 29243]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPA+LRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452120034|ref|YP_007470282.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451909038|gb|AGF80844.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 360
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + N++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTNWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
Length = 360
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter oleivorans DR1]
gi|424744231|ref|ZP_18172529.1| peptide chain release factor 1 [Acinetobacter baumannii WC-141]
gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter oleivorans DR1]
gi|422942970|gb|EKU38001.1| peptide chain release factor 1 [Acinetobacter baumannii WC-141]
Length = 362
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIQANKDLLVELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
Length = 362
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL++ +R +E+ LL++ V + + +E++ L PI Y Y + +
Sbjct: 1 MKKSLELKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ + +E+L D E+ A +E+ AK+++ +++ +++ ++PKD +D+RNI++EIRAG
Sbjct: 61 NVSSLEELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMYIR++E W+ E+IS S E GGYKEII RI G VYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE DEI+DI INP DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN++ A+ +L R+ D++ +Q+ A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSERIRTY 312
>gi|406036652|ref|ZP_11044016.1| peptide chain release factor 1 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 362
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K+ + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIKANKELLVELEDQLNVLMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAENQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|431926273|ref|YP_007239307.1| peptide chain release factor 1 (bRF-1) [Pseudomonas stutzeri RCH2]
gi|431824560|gb|AGA85677.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
stutzeri RCH2]
Length = 360
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDGEVISDQTRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAEEEVAEAKTQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPA+LRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
Length = 359
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/308 (53%), Positives = 217/308 (70%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M ++ R +EL+ LL+ EV N ++ K +EHS L ++ Y YKK+ DI
Sbjct: 3 MFDRIADLETRFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIGD 62
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+E+L D EMR A E+ ++R +E EIK L+LPKD ND +N+ +EIRAGTGGD
Sbjct: 63 NRELLKEPDQEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAGTGGD 122
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
ESALF DL RMY RF+E N W+ E+IS S SE GG+KE+IA + G V++KLK+ESG H
Sbjct: 123 ESALFAGDLFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGTH 182
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE QGRIHTSACTVAV+PEA+++ DI+INPADL+ID YR+SGAGGQH+N TDS
Sbjct: 183 RVQRVPETEAQGRIHTSACTVAVMPEAEDV-DIDINPADLKIDVYRSSGAGGQHVNTTDS 241
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTG VV CQ +RSQ KN+A A+K+L +RI D+ L EQ + A R+ +GS
Sbjct: 242 AVRITHIPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVGSGD 301
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 302 RSERIRTY 309
>gi|392950419|ref|ZP_10315974.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|392950606|ref|ZP_10316161.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|391859381|gb|EIT69909.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|391859568|gb|EIT70096.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
Length = 358
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKL+ +R +E+ L+ EV + + + +E++ L P+VE ++ Y+ +
Sbjct: 1 MKPSLLSKLQNMVERREEIAGELSTPEVLGDPDKFRRLSQEYAQLGPLVESFSAYRSTQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I + ML D EMR A ++ A+ R+ ++E ++ ++P D D N+F+EIRAGTG
Sbjct: 61 EIESLDAMLGDPEMRELAEADLPAARARLEELEKSLQAYLVPSDPLDGNNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S S E GGYKEII+RI G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLHRMYSKYAEARGWQLEVLSLSEGEHGGYKEIISRIAGFGAYSQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE QGRIHTSA TVAV+PE +E + I INPADL++DTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETEAQGRIHTSAATVAVLPEIEETQAIEINPADLKVDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITHIP+G+VV+CQ +RSQHKN+A A+ +L +R+ D++ QQ + A R+ L+GS
Sbjct: 241 ESAIRITHIPSGVVVECQEERSQHKNRAKAMALLASRLLDAERSRQQGDVAATRKKLVGS 300
>gi|358010045|ref|ZP_09141855.1| peptide chain release factor 1 [Acinetobacter sp. P8-3-8]
Length = 362
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL+ LL EV ++ K + REH+ L I +++ YK+ +
Sbjct: 1 MKESLRLRLDQLCDRHEELEALLADVEVISDNKRFRNLSREHNDLTEITDVWKKYKQAED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A++EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAEAMLSDPDFKEMAVEEIKENKALIEQLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKEII + G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLYRMYSKYAESQSWRIEVLSENEGEHGGYKEIICLVSGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ++RSQHKNKA AL +L +R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQDERSQHKNKAKALALLASRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
gi|378778233|ref|YP_005186672.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|397664775|ref|YP_006506313.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
pneumophila]
gi|397667997|ref|YP_006509534.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
pneumophila]
gi|61214584|sp|Q5WUB1.1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61214585|sp|Q5X2V3.1|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61214588|sp|Q5ZT29.1|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
gi|364509049|gb|AEW52573.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|395128186|emb|CCD06391.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
pneumophila]
gi|395131408|emb|CCD09676.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
pneumophila]
Length = 362
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 228/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL++ +R +E+ LL++ + + + +E++ L P+ + Y +Y +
Sbjct: 1 MKKSLELKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKN 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ + E+L +D ++ A +EI+ KK+I +++ +++ ++PKD +D+RNI++E+RAG
Sbjct: 61 NLDSLNELLESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E+IS S E GGYKEIIA+I G VYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE DEI DI INP DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A A+ +L R+ D+++ +Q+ A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSERIRTY 312
>gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
gi|417552933|ref|ZP_12204003.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-81]
gi|417560753|ref|ZP_12211632.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC137]
gi|417572902|ref|ZP_12223756.1| peptide chain release factor 1 [Acinetobacter baumannii Canada
BC-5]
gi|421198276|ref|ZP_15655443.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC109]
gi|421457122|ref|ZP_15906459.1| peptide chain release factor 1 [Acinetobacter baumannii IS-123]
gi|421622896|ref|ZP_16063788.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC074]
gi|421633506|ref|ZP_16074135.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-13]
gi|421644508|ref|ZP_16084990.1| peptide chain release factor 1 [Acinetobacter baumannii IS-235]
gi|421646048|ref|ZP_16086503.1| peptide chain release factor 1 [Acinetobacter baumannii IS-251]
gi|421660006|ref|ZP_16100214.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-83]
gi|421664373|ref|ZP_16104513.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC110]
gi|421698835|ref|ZP_16138374.1| peptide chain release factor 1 [Acinetobacter baumannii IS-58]
gi|421796724|ref|ZP_16232781.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-21]
gi|421802356|ref|ZP_16238309.1| peptide chain release factor 1 [Acinetobacter baumannii Canada BC1]
gi|421804449|ref|ZP_16240359.1| peptide chain release factor 1 [Acinetobacter baumannii WC-A-694]
gi|226739095|sp|B7H0L9.1|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226739096|sp|B7IBA1.1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238688120|sp|B0V7E0.1|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
gi|395523335|gb|EJG11424.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC137]
gi|395566244|gb|EJG27889.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC109]
gi|400206846|gb|EJO37817.1| peptide chain release factor 1 [Acinetobacter baumannii IS-123]
gi|400208470|gb|EJO39440.1| peptide chain release factor 1 [Acinetobacter baumannii Canada
BC-5]
gi|400393192|gb|EJP60238.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-81]
gi|404572154|gb|EKA77199.1| peptide chain release factor 1 [Acinetobacter baumannii IS-58]
gi|408505292|gb|EKK07017.1| peptide chain release factor 1 [Acinetobacter baumannii IS-235]
gi|408518041|gb|EKK19576.1| peptide chain release factor 1 [Acinetobacter baumannii IS-251]
gi|408694022|gb|EKL39610.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC074]
gi|408706036|gb|EKL51360.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-13]
gi|408706399|gb|EKL51717.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-83]
gi|408712670|gb|EKL57853.1| peptide chain release factor 1 [Acinetobacter baumannii OIFC110]
gi|410398557|gb|EKP50772.1| peptide chain release factor 1 [Acinetobacter baumannii Naval-21]
gi|410404153|gb|EKP56226.1| peptide chain release factor 1 [Acinetobacter baumannii Canada BC1]
gi|410411820|gb|EKP63689.1| peptide chain release factor 1 [Acinetobacter baumannii WC-A-694]
Length = 362
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|392307375|ref|ZP_10269909.1| peptide chain release factor 1 [Pseudoalteromonas citrea NCIMB
1889]
Length = 361
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ +L+ + ++ + +E+S L +V+ + +Y++ +
Sbjct: 1 MKESVYRKLETLAERYEEVQAMLSDPSIISDQNRFRTLSKEYSELEDVVKTFASYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TA+EML +D +MR A +E AK I +E +++ L+LPKD D N+F+E+RAG
Sbjct: 61 DVATAEEMLKDSDPDMREMAQEEYKEAKASIVQLEDDLQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK EI+S + E GGY+E+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETQKWKIEIVSVNEGEHGGYREVIANISGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINSADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++Q+ A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLGARLQQAEDEKRQAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|417233395|ref|ZP_12034159.1| peptide chain release factor 1 [Escherichia coli 5.0959]
gi|386203661|gb|EII08179.1| peptide chain release factor 1 [Escherichia coli 5.0959]
Length = 360
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMSELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|425744084|ref|ZP_18862146.1| peptide chain release factor 1 [Acinetobacter baumannii WC-323]
gi|425492033|gb|EKU58305.1| peptide chain release factor 1 [Acinetobacter baumannii WC-323]
Length = 362
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E+++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWSKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++E+RAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIKENKALLVELEDQLNVLMIPKDPNDANAAYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKEII RI G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEIICRIDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
Length = 360
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL LL V N+ + + +E+S L +V+ + +K++N
Sbjct: 1 MKASIISKLETLDERYEELQALLGDPSVINDQEKFRAYSKEYSQLEDVVKCFARWKQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ +L+D M+ A +EI + I + E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 DLQEAQILLDDPSMKEMAEEEIAHCTQGIEESEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKEII +I G NVY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKISGENVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESALPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +R+ ++ + + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERKAAEQADTRRSLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|386834324|ref|YP_006239639.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. 3480]
gi|385201025|gb|AFI45880.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. 3480]
Length = 360
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL+ LL + V ++ + +E++ L +V+ + + ++N
Sbjct: 1 MKPTIISKLESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D M+ A +EI K I +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NMEEAQLLLDDPSMKEMAQEEIETCKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E WK E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
Length = 360
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ +R +EL+ LL V ++ + + +E++ L +V+ + + ++N
Sbjct: 1 MKPSIISKLDSLKERHEELEALLGDASVISDQEKFRAYSKEYAQLEDVVKCFARWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+DL M+ A +EI K + +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIEEAQLLLDDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQQQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|393762737|ref|ZP_10351363.1| peptide chain release factor 1 [Alishewanella agri BL06]
gi|392606359|gb|EIW89244.1| peptide chain release factor 1 [Alishewanella agri BL06]
Length = 363
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 221/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V ++ K + + +E S L + + + +Y++ E
Sbjct: 1 MKDSVYRKLEALVERYEEVQALLSDASVISDQKRFRELSKEFSQLEELSKAFRSYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DE LAK RI ++ E++ L+LPKD ND + F+EIRAG
Sbjct: 61 DLLMAEEMQKDSDPEMREMAQDEYKLAKNRIEQLDTELQILLLPKDPNDNNSCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+E WK E++S + E GG+KE+IA + G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAETQRWKVEVLSANEGEHGGFKEVIASVQGEGVYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I INPADL++DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPESEAIEINPADLKVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
+TDSA+RITH+PTGIVV+CQ++RSQHKN+A A+ +L +RI+ D K R ++ +T RR
Sbjct: 241 RTDSAIRITHLPTGIVVECQDERSQHKNRARAMAVLQSRIQAAEDEKRRLEEQST---RR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. Pm70]
gi|378774264|ref|YP_005176507.1| peptide chain release factor 1 [Pasteurella multocida 36950]
gi|421263288|ref|ZP_15714345.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425063244|ref|ZP_18466369.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
gallicida X73]
gi|13431785|sp|P57852.1|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
gi|356596812|gb|AET15538.1| peptide chain release factor 1 [Pasteurella multocida 36950]
gi|401689798|gb|EJS85175.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404382807|gb|EJZ79264.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
gallicida X73]
Length = 360
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL+ LL + V ++ + +E++ L +V+ + + ++N
Sbjct: 1 MKPTIISKLESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D M+ A +EI K I +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NMEEAQLLLDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E WK E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|392537156|ref|ZP_10284293.1| peptide chain release factor 1 [Pseudoalteromonas marina mano4]
Length = 361
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + Y++ E
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D +MR A +E AK +I E EI+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLASAEEMLKDSDPDMREMAQEEYKEAKAQILSHEDEIQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+E WK E+++ + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|402757263|ref|ZP_10859519.1| peptide chain release factor 1 [Acinetobacter sp. NCTC 7422]
Length = 362
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E+++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWSKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + +E ++ L++PKD ND ++E+RAGTG
Sbjct: 61 DIETAETMKSDPDFKDMAEEEIKENKALLVALEEQLNVLMIPKDPNDANAAYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKEII RI G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEIICRIDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|417474773|ref|ZP_12169769.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353646348|gb|EHC89793.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 304
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|449328067|gb|AGE94368.1| peptide chain release factor 1 [Citrobacter amalonaticus Y19]
Length = 360
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++I +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQIQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK + +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKDKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ +Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASTRRNLLGS 300
>gi|390952357|ref|YP_006416116.1| peptide chain release factor 1 (bRF-1) [Thiocystis violascens DSM
198]
gi|390428926|gb|AFL75991.1| bacterial peptide chain release factor 1 (bRF-1) [Thiocystis
violascens DSM 198]
Length = 359
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 207/294 (70%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
KLE+ ++R E+ LL + + + + RE++ L P++ Y Y + D A+
Sbjct: 7 GKLERIAERYSEVMALLAEADTQTDQNRFRDLGREYAQLEPLMGCYGRYLEAERDRTAAE 66
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
EML D EM A DEI + R+ +E E+ L++P D ND+ N F+EIRAGTGG E+AL
Sbjct: 67 EMLADPEMAALAKDEIAQTETRLAALEPELHHLLIPPDPNDQCNSFLEIRAGTGGAEAAL 126
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
F DLLRMY+R++E W+ E +S S E+GGYKE++ R+ G V+S+LKFE G HRVQR
Sbjct: 127 FAADLLRMYVRYAETLGWRTEQVSESPGELGGYKEVVVRVSGNGVFSRLKFEPGAHRVQR 186
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
VP+TE+QGR+HTSACTVAV+PE + I+ I+INP DLR DTYRASGAGGQHINKTDSA+RI
Sbjct: 187 VPETESQGRVHTSACTVAVLPEVESIDAIDINPNDLRTDTYRASGAGGQHINKTDSAIRI 246
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
THIP+GIVV+CQ +RSQHKN+A A+ +L A++ S Q S ++ R+L +GS
Sbjct: 247 THIPSGIVVECQEERSQHKNRARAMSLLHAKLLASARESQASEQSESRKLQVGS 300
>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
Length = 362
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REH+ L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAEMMKSDPDFKDMAEEEIKENKALLVELEEQLNVLMIPKDPNDANAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIP+G+VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 362
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V ++ + +E+S L + + + YK+ +
Sbjct: 1 MKPSILVKLETLEERYEEVQHLLGDPSVISDQDKFRSLSKEYSQLEEVTKCFQAYKQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A +EI AK I +E E++ L++PKD ND+RN F+EIRAG
Sbjct: 61 DLAAAEEMANEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R++ER W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E INP+DL+IDTYR+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|402780255|ref|YP_006635801.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|402541162|gb|AFQ65311.1| Peptide chain release factor 1 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 360
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/300 (52%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ E
Sbjct: 1 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKN++ AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNQSQALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|425065343|ref|ZP_18468463.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
gallicida P1059]
gi|404384207|gb|EJZ80650.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
gallicida P1059]
Length = 360
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL+ LL + V ++ + +E++ L +V+ + + ++N
Sbjct: 1 MKPTIISKLESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D M+ A +EI K I +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NMEEAQLLLDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E WK E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris str. B100]
gi|384426735|ref|YP_005636092.1| peptide chain release factor 1 [Xanthomonas campestris pv. raphani
756C]
gi|24418637|sp|Q8PC68.1|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229576663|sp|B0RUA5.1|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris]
gi|341935835|gb|AEL05974.1| peptide chain release factor 1 [Xanthomonas campestris pv. raphani
756C]
Length = 361
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ EV +N + RE S L P+ +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M ND EMR A +EI A+ R+ +++ ++ L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ +++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris str. 8004]
gi|81304380|sp|Q4URB6.1|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv.
campestris str. 8004]
Length = 361
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ EV +N + RE S L P+ +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M ND EMR A +EI A+ R+ +++ ++ L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ +++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAKAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
RUH2202]
gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
RUH2202]
Length = 362
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +EL LL EV ++ K + K REHS L I E++ Y++ E
Sbjct: 1 MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ M +D + ++ A +EI K + ++E ++ L++PKD ND ++EIRAGTG
Sbjct: 61 DIETAELMKSDPDFKDMAEEEIQANKALLGELESQLNILMIPKDPNDSNAAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GG+KE+I R+ G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++ INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
gi|61214591|sp|Q60A21.1|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
Length = 360
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 220/312 (70%), Gaps = 3/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE S R +E+ LL EV N+ + RE++ L P V + Y++ E
Sbjct: 1 MNPSVQQKLENLSHRFEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLE 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ A+ +L D E+R+ A +E+ +KR +E E++ L+LP+D ND+RN+F+E+RAG
Sbjct: 61 GLDHAQALLQDPDPEVRSLAREELETGRKRCDALEQELQILLLPRDPNDERNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG E+A+F DL RMY R++ER W+ EI+S S E GGYKE++ RI G NVYS+LKFE
Sbjct: 121 TGGAEAAIFAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRISGQNVYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
+G HRVQRVP TE QGRIHTSACTVA++PE D++E I+INPADLRIDT+RASGAGGQH+N
Sbjct: 181 AGTHRVQRVPTTEAQGRIHTSACTVAILPEFDDVE-IDINPADLRIDTFRASGAGGQHVN 239
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITHIPTG VV+CQ++RSQHKN+A A+ +L ARI + +Q S A R+L +
Sbjct: 240 RTDSAIRITHIPTGTVVECQDERSQHKNRARAMSLLQARILAAAQEKQNSEIAASRKLQV 299
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 300 GSGDRSERIRTY 311
>gi|377578910|ref|ZP_09807884.1| peptide chain release factor 1 [Escherichia hermannii NBRC 105704]
gi|377539771|dbj|GAB53049.1| peptide chain release factor 1 [Escherichia hermannii NBRC 105704]
Length = 360
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFLLWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EMR+ A +E+N AK++ +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQVLLDDPEMRDMAQEELNDAKQKSEQLEQELQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASDGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|407803832|ref|ZP_11150664.1| peptide chain release factor 1 [Alcanivorax sp. W11-5]
gi|407022242|gb|EKE33997.1| peptide chain release factor 1 [Alcanivorax sp. W11-5]
Length = 362
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE+ +R +EL LL EV + + RE++ L +V +N+Y + E
Sbjct: 1 MKDSLKHKLERLVERHQELAGLLATPEVISEQGRFRDLSREYAELEDVVSCFNDYCRTQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ M ND ++R A +EI A+ R ++ +++L+LP+D D N+F+EIRAG
Sbjct: 61 DLAAARAMQQDNDPDVREMAGEEIRDAEARADELAQTLQRLMLPRDPRDGSNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DLLRMY R+++R W+ EIIS E GG+KE+I R+ G VYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLLRMYSRYADRTGWRVEIISAHEGEHGGFKEVICRVAGDGVYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+ EA+EI ++ I DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMAEAEEIGEVVIRTEDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+P+G+VV+CQ +RSQHKNKA A+ L AR+ DS ++QQ A R+ L+
Sbjct: 241 TTDSAVRITHLPSGLVVECQEERSQHKNKAKAMSWLKARLYDSMQQKQQQEMAATRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22]
gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
gi|238058716|sp|B5XW51.1|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22]
gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
Length = 360
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ E
Sbjct: 1 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+ G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|359455485|ref|ZP_09244704.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20495]
gi|414071918|ref|ZP_11407876.1| peptide chain release factor 1 [Pseudoalteromonas sp. Bsw20308]
gi|358047482|dbj|GAA80953.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20495]
gi|410805681|gb|EKS11689.1| peptide chain release factor 1 [Pseudoalteromonas sp. Bsw20308]
Length = 361
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL+ V ++ + +E+S L IV+ + YK+ +
Sbjct: 1 MKESVYNKLETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLTYKETQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +A+EML +D EMR A +E AK +I IE +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 NLASAEEMLKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E++S + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ+ RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRDLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|388455454|ref|ZP_10137749.1| peptide chain release factor 1 [Fluoribacter dumoffii Tex-KL]
Length = 362
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL++ +R +E+ LL++ V + + +E++ L P+ + Y Y +
Sbjct: 1 MKKSLELKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPVAQCYETYIEAKN 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ + +E+L +D E+ + A +E+ A+K++ +++ +++ ++PKD +D+RN+++EIRAG
Sbjct: 61 NLSSLQELLEGDDKELASMAAEELEGAQKQLDELDEQLQWHLIPKDPDDERNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R+ E W+ E+IS S E GGYKEII RI G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLYRMYSRYVEDQGWQQELISASHGEHGGYKEIIVRISGQAVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE DEI+DI INP DLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A A+ +L R+ D++ +Q+ A+ R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|336249826|ref|YP_004593536.1| peptide chain release factor 1 [Enterobacter aerogenes KCTC 2190]
gi|444351961|ref|YP_007388105.1| Peptide chain release factor 1 [Enterobacter aerogenes EA1509E]
gi|334735882|gb|AEG98257.1| peptide chain release factor 1 [Enterobacter aerogenes KCTC 2190]
gi|443902791|emb|CCG30565.1| Peptide chain release factor 1 [Enterobacter aerogenes EA1509E]
Length = 360
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + Y +++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAATIADQDRFRALSREYAQLGDVARCYTDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELRDAKEKSEALEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYTRYAEARRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
Length = 362
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + + REH+ L I ++ Y++ E
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A +EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAQAMLSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKE+I I G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D ++INPADLRIDTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|392541033|ref|ZP_10288170.1| peptide chain release factor 1 [Pseudoalteromonas piscicida JCM
20779]
Length = 362
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ +L+ EV ++ + +E S L +V+ + Y++ E
Sbjct: 1 MKESVYRKLETLVERYEEVQAMLSSPEVISDQNRFRALSKEFSELEDVVKAFTAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TA+EML +D +MR A +E AK I +E +++ L+LPKD D N+F+E+RAG
Sbjct: 61 DVATAEEMLKDSDPDMREMAQEEYKEAKAAIAALEDDLQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL MY R++E W+ EI+S + E GGYKE+IA I G VY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFHMYSRYAETQKWRVEIVSANEGEHGGYKEVIANISGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I INP+DL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINPSDLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A AL +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKALSVLSARLQQAEDEKRAAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2143]
gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2143]
Length = 361
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL+ R +EL LL+ EV + Y +E++ + P+V+ Y NY + +
Sbjct: 1 MKDSIKNKLDNLVDRHEELGALLSDGEVIGDQNKYRALSKEYAEVEPVVKCYENYCQTLD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI AK +L D +MR A +E++ A+ + + E+++L+LP+D ND N+F+EIRAG
Sbjct: 61 DIEEAKSLLKDGDADMREMAQEELSGAQSQRDVMMEELQRLLLPRDPNDSHNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK EIIS + GGYKE+I+R+ G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRVSGQDVYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE D ++++ IN +DLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+G+VV+CQ++RSQHKNKA A+ +L +R+ +QQ + RR L+
Sbjct: 241 KTDSAIRITHIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQQQEQSDERRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium]
Length = 363
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 227/302 (75%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + +L+KLE+ S RL+E+ LL+ +V + + + EH+ L PI E + Y +
Sbjct: 1 MNNSILTKLEQLSMRLEEVGALLSDPDVAADQNKFRELSIEHAQLTPINEQFEKYLSTQK 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI +++EML + + ++ A +EI K+++ ++LE+KK +LPKD ND RNI IEIRAG
Sbjct: 61 DIESSEEMLLEDDEEIKTMAKEEITEGKEKLEYLDLELKKALLPKDPNDSRNIIIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL RMY R+ E+ W+ E +S ++ + GG+KE+IARI G NVYSKLKFE
Sbjct: 121 TGGDEASIFSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARISGTNVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PE + IE+++IN +D+RIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIPTG VV+CQ+ RSQHKNKA AL +L +RI D++ +EQQ A R+ LI
Sbjct: 241 KTDSAVRVTHIPTGTVVECQDGRSQHKNKAQALSVLASRILDAQQQEQQKEQALTRKELI 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
Length = 358
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 222/308 (72%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+ KLE+ R +E++ LL+ V ++ + + REH+ L VE+Y Y++I ++I
Sbjct: 3 IFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIED 62
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+E++ +D +MR A +E+ + + ++ L+LPKD ND +NI +EIRAGTGGD
Sbjct: 63 NRELMRDDDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAGTGGD 122
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL R Y R++E++ WK EI+S S S +GG+KE+IA I G NVYS+LK+ESG H
Sbjct: 123 EAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYESGTH 182
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TETQGRIHTSACTVAV+PEA+E+ D+ INP+DLRID YRASGAGGQH+NKT+S
Sbjct: 183 RVQRVPETETQGRIHTSACTVAVLPEAEEV-DLEINPSDLRIDLYRASGAGGQHVNKTES 241
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTG+VV CQ+++SQHKNKA A+K+L +RI D+ E+ + A R+ +GS
Sbjct: 242 AVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAMEAEKHAEMAADRKSQVGSGD 301
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 302 RSERIRTY 309
>gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|416421534|ref|ZP_11689532.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416430225|ref|ZP_11694939.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416436428|ref|ZP_11698230.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416448888|ref|ZP_11706539.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416451057|ref|ZP_11707950.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416456379|ref|ZP_11711383.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416468833|ref|ZP_11718182.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416481597|ref|ZP_11723331.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416491700|ref|ZP_11727211.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416498040|ref|ZP_11729966.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416504682|ref|ZP_11733264.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416511990|ref|ZP_11737574.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416527786|ref|ZP_11743499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416535274|ref|ZP_11747638.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416541753|ref|ZP_11751185.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550655|ref|ZP_11756075.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416562602|ref|ZP_11762302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416566316|ref|ZP_11763758.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416579178|ref|ZP_11771036.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416585048|ref|ZP_11774601.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416590064|ref|ZP_11777580.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416597149|ref|ZP_11781891.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604482|ref|ZP_11786242.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612157|ref|ZP_11791336.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416619377|ref|ZP_11795039.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416627753|ref|ZP_11799199.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416638032|ref|ZP_11803719.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416651592|ref|ZP_11811109.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416654121|ref|ZP_11812124.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416666301|ref|ZP_11817375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416684010|ref|ZP_11824659.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416688420|ref|ZP_11825211.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704889|ref|ZP_11830501.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710875|ref|ZP_11834833.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716742|ref|ZP_11839034.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416721877|ref|ZP_11842936.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416738527|ref|ZP_11853322.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416751461|ref|ZP_11860158.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416757347|ref|ZP_11863118.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416762176|ref|ZP_11866172.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416771545|ref|ZP_11872780.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418484204|ref|ZP_13053208.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418486552|ref|ZP_13055510.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493614|ref|ZP_13060076.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418497724|ref|ZP_13064141.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418502456|ref|ZP_13068828.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509386|ref|ZP_13075680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418514985|ref|ZP_13081175.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418527603|ref|ZP_13093559.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|238689756|sp|B4TXU2.1|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|363555227|gb|EHL39457.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363557130|gb|EHL41337.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363566416|gb|EHL50433.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568088|gb|EHL52078.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363570394|gb|EHL54330.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363572933|gb|EHL56821.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363579663|gb|EHL63441.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366059989|gb|EHN24256.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063759|gb|EHN27970.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366074258|gb|EHN38321.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366075481|gb|EHN39538.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366075812|gb|EHN39864.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077428|gb|EHN41443.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366078093|gb|EHN42098.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366827339|gb|EHN54245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372204231|gb|EHP17759.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894]
gi|389840729|ref|YP_006342813.1| peptide chain release factor 1 [Cronobacter sakazakii ES15]
gi|424799900|ref|ZP_18225442.1| Peptide chain release factor 1 [Cronobacter sakazakii 696]
gi|429119836|ref|ZP_19180536.1| Peptide chain release factor 1 [Cronobacter sakazakii 680]
gi|166223556|sp|A7MKC1.1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894]
gi|387851205|gb|AFJ99302.1| peptide chain release factor 1 [Cronobacter sakazakii ES15]
gi|423235621|emb|CCK07312.1| Peptide chain release factor 1 [Cronobacter sakazakii 696]
gi|426325646|emb|CCK11273.1| Peptide chain release factor 1 [Cronobacter sakazakii 680]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGS 300
>gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
49946]
gi|428785023|ref|ZP_19002514.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
49946]
gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
BAA-2158]
gi|426276585|gb|EKV54312.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQCQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML D EMR A DE+ A+ D+E +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DIAAAEMMLGDAEMREMAQDELQAARATCEDLEQQLQVLLLPKDPDDERNCYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKE+IA++IG Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGS 300
>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|189039988|sp|A9MPA1.1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375123366|ref|ZP_09768530.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445129083|ref|ZP_21380631.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|238690491|sp|B5R924.1|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444854393|gb|ELX79457.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|383310198|ref|YP_005363008.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. HN06]
gi|380871470|gb|AFF23837.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. HN06]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ +R +EL+ LL + V ++ + +E++ L +V+ + + ++N
Sbjct: 1 MKPTIISKLDSLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D M+ A +EI K I +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NMEEAQVLLDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E WK E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|429104946|ref|ZP_19166815.1| Peptide chain release factor 1 [Cronobacter malonaticus 681]
gi|429110605|ref|ZP_19172375.1| Peptide chain release factor 1 [Cronobacter malonaticus 507]
gi|426291669|emb|CCJ92928.1| Peptide chain release factor 1 [Cronobacter malonaticus 681]
gi|426311762|emb|CCJ98488.1| Peptide chain release factor 1 [Cronobacter malonaticus 507]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGS 300
>gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|374980784|ref|ZP_09722114.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375001084|ref|ZP_09725424.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375114668|ref|ZP_09759838.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375118848|ref|ZP_09764015.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378445183|ref|YP_005232815.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378450346|ref|YP_005237705.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699652|ref|YP_005181609.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378955281|ref|YP_005212768.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959265|ref|YP_005216751.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|378984337|ref|YP_005247492.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989116|ref|YP_005252280.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379700947|ref|YP_005242675.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496467|ref|YP_005397156.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386591609|ref|YP_006088009.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409249895|ref|YP_006885710.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|418760438|ref|ZP_13316593.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765867|ref|ZP_13321948.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770158|ref|ZP_13326182.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777380|ref|ZP_13333309.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779028|ref|ZP_13334935.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785850|ref|ZP_13341676.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418789079|ref|ZP_13344867.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418792509|ref|ZP_13348254.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797087|ref|ZP_13352778.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418801389|ref|ZP_13357025.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418809310|ref|ZP_13364862.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813465|ref|ZP_13368986.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418817777|ref|ZP_13373261.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820687|ref|ZP_13376119.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833595|ref|ZP_13388518.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418836812|ref|ZP_13391696.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418840413|ref|ZP_13395242.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418850450|ref|ZP_13405166.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854162|ref|ZP_13408841.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418858800|ref|ZP_13413411.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418863341|ref|ZP_13417879.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866957|ref|ZP_13421418.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419730567|ref|ZP_14257513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419732253|ref|ZP_14259159.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739855|ref|ZP_14266596.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419743766|ref|ZP_14270429.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419748434|ref|ZP_14274930.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788251|ref|ZP_14313942.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793639|ref|ZP_14319257.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358779|ref|ZP_15809076.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421362748|ref|ZP_15813000.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367949|ref|ZP_15818142.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370385|ref|ZP_15820550.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377873|ref|ZP_15827962.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382482|ref|ZP_15832528.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421387791|ref|ZP_15837790.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421391894|ref|ZP_15841860.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421394903|ref|ZP_15844842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421401165|ref|ZP_15851041.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421403232|ref|ZP_15853086.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421410598|ref|ZP_15860379.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421412865|ref|ZP_15862619.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421416857|ref|ZP_15866576.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421852|ref|ZP_15871520.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425873|ref|ZP_15875507.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421431327|ref|ZP_15880912.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421433466|ref|ZP_15883026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421441195|ref|ZP_15890665.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446868|ref|ZP_15896280.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447978|ref|ZP_15897374.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569108|ref|ZP_16014813.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421574838|ref|ZP_16020459.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421577773|ref|ZP_16023358.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421583076|ref|ZP_16028605.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421885810|ref|ZP_16316994.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025951|ref|ZP_16372371.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030986|ref|ZP_16377170.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|423140253|ref|ZP_17127891.1| peptide chain release factor 1 [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|427550014|ref|ZP_18927679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427565907|ref|ZP_18932402.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427585786|ref|ZP_18937184.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427609049|ref|ZP_18942048.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427633363|ref|ZP_18946945.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427656004|ref|ZP_18951710.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427661146|ref|ZP_18956619.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427668347|ref|ZP_18961420.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427765503|ref|ZP_18966579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436603504|ref|ZP_20513173.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436797853|ref|ZP_20523299.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811267|ref|ZP_20530147.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436815641|ref|ZP_20533192.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436846968|ref|ZP_20539600.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851230|ref|ZP_20541829.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436857995|ref|ZP_20546515.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865171|ref|ZP_20551138.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875656|ref|ZP_20557563.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436883220|ref|ZP_20561649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887919|ref|ZP_20564248.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896292|ref|ZP_20569048.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906270|ref|ZP_20575116.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911782|ref|ZP_20577611.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436920053|ref|ZP_20582792.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930360|ref|ZP_20588585.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436935734|ref|ZP_20591174.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942923|ref|ZP_20595869.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436951584|ref|ZP_20600639.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436964708|ref|ZP_20606344.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436971317|ref|ZP_20609710.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436985386|ref|ZP_20614906.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991645|ref|ZP_20617656.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437012140|ref|ZP_20624653.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437020890|ref|ZP_20627701.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437029819|ref|ZP_20631001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437042542|ref|ZP_20636133.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437052294|ref|ZP_20641717.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437058254|ref|ZP_20645101.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437069233|ref|ZP_20651188.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437075944|ref|ZP_20654307.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086494|ref|ZP_20660503.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437095532|ref|ZP_20664636.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437117609|ref|ZP_20670052.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437121336|ref|ZP_20671817.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134665|ref|ZP_20679089.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139909|ref|ZP_20682173.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437146951|ref|ZP_20686503.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437155242|ref|ZP_20691461.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437162189|ref|ZP_20695848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167234|ref|ZP_20698552.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177187|ref|ZP_20703667.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437183805|ref|ZP_20707901.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437261309|ref|ZP_20718379.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265907|ref|ZP_20720722.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437282137|ref|ZP_20729138.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437292409|ref|ZP_20731936.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437308275|ref|ZP_20735316.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437321213|ref|ZP_20738562.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437340948|ref|ZP_20744499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437363535|ref|ZP_20748512.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437424572|ref|ZP_20755236.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437437664|ref|ZP_20756803.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437462440|ref|ZP_20762591.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437478370|ref|ZP_20767383.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437488504|ref|ZP_20770295.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437545003|ref|ZP_20782970.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557119|ref|ZP_20785080.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437581072|ref|ZP_20792218.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437596087|ref|ZP_20796139.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437601326|ref|ZP_20797570.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437614151|ref|ZP_20801778.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437660175|ref|ZP_20812412.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437672280|ref|ZP_20816196.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437695519|ref|ZP_20822160.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437702203|ref|ZP_20824105.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437725730|ref|ZP_20829813.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437769192|ref|ZP_20835385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437807539|ref|ZP_20839801.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437822579|ref|ZP_20843451.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|438045311|ref|ZP_20855971.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438095556|ref|ZP_20862075.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438096924|ref|ZP_20862184.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112301|ref|ZP_20868898.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|440762966|ref|ZP_20942015.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768129|ref|ZP_20947103.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440774579|ref|ZP_20953466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445141411|ref|ZP_21385433.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445151911|ref|ZP_21390614.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445182398|ref|ZP_21398536.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445234026|ref|ZP_21406568.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445277017|ref|ZP_21410646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445338882|ref|ZP_21416261.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346542|ref|ZP_21418835.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445362734|ref|ZP_21424378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|61230201|sp|P0A287.1|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61230203|sp|P0A288.1|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|75482992|sp|Q57NN5.1|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039989|sp|A9MW04.1|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690045|sp|B5F4H6.1|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690378|sp|B5FU19.1|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690453|sp|B5R3J9.1|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690683|sp|B4TKA4.1|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238693511|sp|B4SUG2.1|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353075772|gb|EHB41532.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|357205892|gb|AET53938.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|374353137|gb|AEZ44898.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379052807|gb|EHY70698.1| peptide chain release factor 1 [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379984616|emb|CCF89267.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380463288|gb|AFD58691.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381294575|gb|EIC35714.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381297420|gb|EIC38511.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381303102|gb|EIC44131.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381311331|gb|EIC52150.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381314087|gb|EIC54862.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383798653|gb|AFH45735.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392616565|gb|EIW98997.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392617765|gb|EIX00180.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392737954|gb|EIZ95105.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392739620|gb|EIZ96753.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392742743|gb|EIZ99827.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392743839|gb|EJA00901.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392750722|gb|EJA07682.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392754478|gb|EJA11395.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392761039|gb|EJA17869.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392768303|gb|EJA25060.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392770460|gb|EJA27188.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392773395|gb|EJA30091.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392774691|gb|EJA31386.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392780353|gb|EJA37008.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392787316|gb|EJA43858.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392792247|gb|EJA48711.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795429|gb|EJA51801.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392801173|gb|EJA57403.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392810903|gb|EJA66915.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392818300|gb|EJA74184.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392824955|gb|EJA80713.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392831668|gb|EJA87297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392833209|gb|EJA88824.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840069|gb|EJA95607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|395986469|gb|EJH95633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395987219|gb|EJH96382.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395990572|gb|EJH99703.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395997178|gb|EJI06219.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395997590|gb|EJI06630.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006468|gb|EJI15431.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396008616|gb|EJI17550.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396010857|gb|EJI19769.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396013640|gb|EJI22527.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396021230|gb|EJI30056.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396022731|gb|EJI31544.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396030263|gb|EJI38998.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396039953|gb|EJI48577.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396041167|gb|EJI49790.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396045034|gb|EJI53629.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396053274|gb|EJI61771.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396055726|gb|EJI64203.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396061870|gb|EJI70286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062450|gb|EJI70863.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396064798|gb|EJI73181.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396074275|gb|EJI82566.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|402525038|gb|EJW32335.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402526480|gb|EJW33755.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527792|gb|EJW35051.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402532542|gb|EJW39734.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414018964|gb|EKT02593.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414019447|gb|EKT03061.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414021460|gb|EKT05008.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414033112|gb|EKT16083.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414035036|gb|EKT17938.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414038025|gb|EKT20756.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414047864|gb|EKT30127.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414049342|gb|EKT31557.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414053772|gb|EKT35747.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414059867|gb|EKT41410.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414065404|gb|EKT46156.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434960779|gb|ELL54129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434963898|gb|ELL56920.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434972761|gb|ELL65170.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434973757|gb|ELL66145.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434977132|gb|ELL69281.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986532|gb|ELL78183.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990147|gb|ELL81697.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434995247|gb|ELL86564.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996206|gb|ELL87522.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435001665|gb|ELL92754.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435009629|gb|ELM00415.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435014847|gb|ELM05404.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016181|gb|ELM06707.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435026027|gb|ELM16158.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435028118|gb|ELM18198.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032015|gb|ELM21959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435038572|gb|ELM28353.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435043122|gb|ELM32839.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435048565|gb|ELM38130.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435052051|gb|ELM41553.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435057606|gb|ELM46975.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062226|gb|ELM51408.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435063460|gb|ELM52608.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435068222|gb|ELM57251.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435079518|gb|ELM68229.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435082853|gb|ELM71464.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435084467|gb|ELM73053.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435090894|gb|ELM79295.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435092651|gb|ELM81006.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435094067|gb|ELM82406.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435102640|gb|ELM90743.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435105241|gb|ELM93278.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435109909|gb|ELM97855.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435113047|gb|ELN00905.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435120144|gb|ELN07746.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435125909|gb|ELN13334.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435131314|gb|ELN18541.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435134581|gb|ELN21707.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435138110|gb|ELN25137.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435143144|gb|ELN30012.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435151856|gb|ELN38495.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435154867|gb|ELN41425.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435162167|gb|ELN48358.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163765|gb|ELN49901.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435168755|gb|ELN54587.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177271|gb|ELN62603.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435181020|gb|ELN66113.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435185870|gb|ELN70726.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435194377|gb|ELN78831.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435196811|gb|ELN81135.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435200137|gb|ELN84150.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209492|gb|ELN92811.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435213277|gb|ELN96187.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435219106|gb|ELO01469.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435221189|gb|ELO03462.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435232128|gb|ELO13254.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435234013|gb|ELO14903.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435240386|gb|ELO20790.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435241225|gb|ELO21591.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435250569|gb|ELO30293.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435261096|gb|ELO40257.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435263807|gb|ELO42840.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435269371|gb|ELO47915.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435277795|gb|ELO55727.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435279597|gb|ELO57356.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435292320|gb|ELO69089.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435294809|gb|ELO71378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435300859|gb|ELO76918.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435306620|gb|ELO81893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435306753|gb|ELO81999.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435313994|gb|ELO87494.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435319958|gb|ELO92693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435327269|gb|ELO99011.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435330379|gb|ELP01645.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|436412802|gb|ELP10740.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436418634|gb|ELP16517.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436421716|gb|ELP19560.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|444851113|gb|ELX76208.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444855054|gb|ELX80107.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444860896|gb|ELX85796.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444871337|gb|ELX95775.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444872631|gb|ELX96957.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444877916|gb|ELY02049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444883961|gb|ELY07813.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444887104|gb|ELY10829.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 360
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|417855599|ref|ZP_12500702.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338215887|gb|EGP02105.1| peptide chain release factor 1 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 330
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 218/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ +R +EL+ LL + V ++ + +E++ L +V+ + + ++N
Sbjct: 1 MKPTIISKLDSLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D M+ A +EI K I +E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NMEEAQVLLDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E WK E++S + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ Q+ A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|417790281|ref|ZP_12437847.1| peptide chain release factor 1 [Cronobacter sakazakii E899]
gi|429115863|ref|ZP_19176781.1| Peptide chain release factor 1 [Cronobacter sakazakii 701]
gi|449307988|ref|YP_007440344.1| peptide chain release factor 1 [Cronobacter sakazakii SP291]
gi|333955636|gb|EGL73373.1| peptide chain release factor 1 [Cronobacter sakazakii E899]
gi|426318992|emb|CCK02894.1| Peptide chain release factor 1 [Cronobacter sakazakii 701]
gi|449098021|gb|AGE86055.1| peptide chain release factor 1 [Cronobacter sakazakii SP291]
Length = 360
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPEINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGS 300
>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
Length = 359
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 209/291 (71%), Gaps = 3/291 (1%)
Query: 22 LLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLN--DLEMRNFAL 79
LL+ EV N ++ K +EHS L +V Y YKKI DI KE+L D EMR A
Sbjct: 20 LLSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79
Query: 80 DEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFS 139
E+ + R ++E EIK L+LPKD ND +N+ +EIRAGTGGDESALF DL RMY RF+
Sbjct: 80 AELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139
Query: 140 ERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTS 199
E N W+ EIIS S SE GG+KE+IA + G V++KLK+ESG HRVQRVP+TE QGRIHTS
Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199
Query: 200 ACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQN 259
ACTVAV+PEA+++ DI+INPADL+ID YR+SGAGGQH+N TDSAVRITH+PTG VV CQ
Sbjct: 200 ACTVAVMPEAEDV-DIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258
Query: 260 DRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+RSQ KN+A A+K+L +RI D+ L EQ + A R+ +GS + + +
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVGSGDRSERIRTY 309
>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
gi|416892929|ref|ZP_11924253.1| peptide chain release factor 1 [Aggregatibacter aphrophilus ATCC
33389]
gi|422336286|ref|ZP_16417259.1| peptide chain release factor 1 [Aggregatibacter aphrophilus F0387]
gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
gi|347814627|gb|EGY31276.1| peptide chain release factor 1 [Aggregatibacter aphrophilus ATCC
33389]
gi|353346472|gb|EHB90757.1| peptide chain release factor 1 [Aggregatibacter aphrophilus F0387]
Length = 360
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/313 (51%), Positives = 225/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N
Sbjct: 1 MKPSIITKLESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ AK +L+D EM+ A EI ++ + ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAKILLDDPEMKEMAQMEIEESEAELTEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQDKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|406939535|gb|EKD72535.1| hypothetical protein ACD_45C00649G0003 [uncultured bacterium]
Length = 360
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/305 (52%), Positives = 216/305 (70%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK + KL+ +R +EL LL +V N +DY K E++ L PIV ++ +K
Sbjct: 1 MKPSIEKKLQSLIERHEELSALLADPDVIGEQNRFRDYSK---EYAQLEPIVAVFKRFKI 57
Query: 58 INEDIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
D A+E+L D E++ A E+ A+ +E +++ L+LP+D +D+ NIF+EI
Sbjct: 58 CVSDQEGAQELLKEADPELQELAKQELKNAEALQAKLEQDLQVLLLPRDPHDESNIFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAG GGDE+A+F DL RMY R++E W+ E+IS S SE GGYKEII RI+G YS+L
Sbjct: 118 RAGAGGDEAAIFAGDLSRMYTRYAETQGWQVEVISASTSEQGGYKEIILRIVGQGAYSRL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESGVHRVQRVP+TE QGRIHTS CT+AV+PE DE+E I+INPADLRIDT+RASGAGGQ
Sbjct: 178 KFESGVHRVQRVPETEAQGRIHTSTCTIAVMPEVDEVEAIDINPADLRIDTFRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+ KTDSA+RITH+PTG VV+CQ++RSQHKN+A A+ +L A++ + +QQ A+ RR
Sbjct: 238 HVQKTDSAIRITHLPTGTVVECQDERSQHKNRARAMSLLKAKLLAEERNKQQQQQAETRR 297
Query: 296 LLIGS 300
L+G+
Sbjct: 298 HLVGT 302
>gi|395232440|ref|ZP_10410691.1| peptide chain release factor 1 [Enterobacter sp. Ag1]
gi|394733426|gb|EJF33054.1| peptide chain release factor 1 [Enterobacter sp. Ag1]
Length = 360
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 217/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDASTIADQDRFRALSREYAQLSDVSRCFLQWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML D EMR A +E+ AK ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAESMLGDPEMREMAQEELAEAKASSEELEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EIIS + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRIEIISANEGEHGGFKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQEEASTRRNLLGS 300
>gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
Length = 360
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK + +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKDKSEQLEQQLQVLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKVSGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E INP +LRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS 300
>gi|374261664|ref|ZP_09620242.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
gi|363537758|gb|EHL31174.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
Length = 351
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 217/299 (72%), Gaps = 2/299 (0%)
Query: 14 KRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML--ND 71
+R +E+ LL++ V + + +E++ L P+ Y Y ++ + +EML +D
Sbjct: 3 ERFQEVGRLLSEASVIADQNQFKALSKEYAQLEPVATCYETYLDAQNNLASLQEMLAGDD 62
Query: 72 LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDL 131
E+ A DE+ A+K+I +++ +++ ++PKD +D+RNI++E+RAGTGGDE+A+F DL
Sbjct: 63 QELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIFAGDL 122
Query: 132 LRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTE 191
RMY R++E W+ E+IS S E GGYKEIIARI G VYS+LKFESG HRVQRVP TE
Sbjct: 123 YRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKFESGAHRVQRVPDTE 182
Query: 192 TQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
+QGR+HTSACTVAV+PE +EI+DI IN DLRIDTYR+SGAGGQH+NKTDSA+RITHIPT
Sbjct: 183 SQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHVNKTDSAIRITHIPT 242
Query: 252 GIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
G+VV+CQ++RSQHKN+A A+ +L R+ D++ +Q+ A+ R+ L+GS + + +
Sbjct: 243 GVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTRKSLVGSGDRSERIRTY 301
>gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
Length = 362
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ LL++ V ++ + K +E++ L P+V + +Y+K+
Sbjct: 1 MKDSLRRKLESIAERHEEVAALLSEGSVISDQNQFRKLSQEYAELEPVVTCFADYRKVLA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A++++ +D EMR +E+ + + EL+++KL+LPKD ND RN+++EIRAG
Sbjct: 61 DITLARQLMEDSDPEMREMGAEELRTGQAQRDQFELDLQKLMLPKDPNDGRNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E+IS E GGYKEII+R+ G +VYSKLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAESCGWRVEVISEHEGEHGGYKEIISRVSGDSVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PEADEI DI+I P DL++DTYR++GAGGQH+N
Sbjct: 181 SGAHRVQRVPVTEAQGRIHTSACTVAVLPEADEIGDIDIRPEDLKMDTYRSTGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVR+TH+PTG VV+CQ +RSQHKN+A AL +L AR+ + Q T++ RR L+
Sbjct: 241 TTDSAVRLTHLPTGTVVECQEERSQHKNRAKALALLRARLLSNAQDAQTRQTSEARRQLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
Length = 351
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 211/299 (70%), Gaps = 3/299 (1%)
Query: 15 RLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML---ND 71
RL ELD LL +V ++K RE S + +V + Y + +D+ A+EML +D
Sbjct: 2 RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61
Query: 72 LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDL 131
EM A E+ A+ + +E E++ ++P+D +D RN F+EIRAGTGGDESALF DL
Sbjct: 62 AEMAAMAEQEVVDAEADLARLEHELQLALIPRDPDDARNAFVEIRAGTGGDESALFAGDL 121
Query: 132 LRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTE 191
RMY+R+ ER W+ E++S S SE+GGYKE++ ++ G +V+ L+FESG HRVQRVP TE
Sbjct: 122 ARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVPATE 181
Query: 192 TQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
QGRIHTSACTVAV+PE DE E++ +NPA+LRIDT+RASGAGGQH+NKTDSA+RITH+PT
Sbjct: 182 AQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITHLPT 241
Query: 252 GIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
GIV +CQ+DRSQH+NKA A+ +L AR+++ E+ + A R+ L+GS + + +
Sbjct: 242 GIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEAATRKSLVGSGDRSDRIRTY 300
>gi|429094188|ref|ZP_19156738.1| Peptide chain release factor 1 [Cronobacter dublinensis 1210]
gi|426740806|emb|CCJ82851.1| Peptide chain release factor 1 [Cronobacter dublinensis 1210]
Length = 360
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKTKSEALEQELQLLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASDGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|417126008|ref|ZP_11973868.1| peptide chain release factor 1 [Escherichia coli 97.0246]
gi|386145525|gb|EIG91983.1| peptide chain release factor 1 [Escherichia coli 97.0246]
Length = 360
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EM A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMCEMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INP DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPVDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
gi|189039974|sp|A5G8T7.1|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
uraniireducens Rf4]
Length = 355
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/306 (52%), Positives = 220/306 (71%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+E+ +R +EL+ LL V N ++ K REHS L +VE Y NYKK+ +I
Sbjct: 1 MFEKIEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITG 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D EM+ A E+ +++ +E EIK L+LPKD ND +++ +EIRAGTGGDE+
Sbjct: 61 NRELLADPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTGGDEA 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY R++E N W+ E+IS S SE GG+KEI+A + G V++KLK+ESG HRV
Sbjct: 121 ALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVA++PEA+++ DI+INPADL+ID YR+SGAGGQH+N TDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMPEAEDV-DIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG VV CQ +RSQ KN+A A+K+L RI D+ ++EQ + A R+ +GS +
Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQEQSARLAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>gi|418845138|ref|ZP_13399924.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392813947|gb|EJA69911.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
Length = 360
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPVTESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|333907093|ref|YP_004480679.1| peptide chain release factor 1 [Marinomonas posidonica IVIA-Po-181]
gi|333477099|gb|AEF53760.1| Peptide chain release factor 1 [Marinomonas posidonica IVIA-Po-181]
Length = 362
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 230/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +EL LL++ +V + + +E++ L P+V+ +N Y+++ E
Sbjct: 1 MKESIKLKLESLAERYEELAALLSEADVIMDQDLFRSYSKEYAELEPVVQCFNGYQQVLE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I A+ M+ +D +++ ++E+ +++ ++L ++KL+LPKD ND RN+F+E+RAG
Sbjct: 61 NIEEAELMMTDSDPDIKEMGVEEMKAGQEQQEALQLTLQKLLLPKDPNDSRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL RMY R++E WK EI+S S E GGYKE+IARI+G YSKLKFE
Sbjct: 121 TGGDEASIFSGDLFRMYSRYAETQRWKVEIVSASEGEHGGYKEVIARIVGDGAYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DE+E I+IN ADLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAIMPEMDEVEGIDINKADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ++RSQHKN+A A+ +L +R+ ++ + S ++ R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLASRLLAAEQEKAASEQSEARKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
93-146]
gi|259585221|sp|C5B814.1|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
93-146]
Length = 360
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + ++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLAWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EMR+ A +E+ A+ R+ ++E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLTTAEMLLDDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IAR+ G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+P E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRVRTY 310
>gi|374620511|ref|ZP_09693045.1| bacterial peptide chain release factor 1 (bRF-1) [gamma
proteobacterium HIMB55]
gi|374303738|gb|EHQ57922.1| bacterial peptide chain release factor 1 (bRF-1) [gamma
proteobacterium HIMB55]
Length = 361
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S R +E+ LL E ++ + +E++ L +V++Y+ Y++ +
Sbjct: 1 MKSSLVTKLESLSDRHEEVSALLADAETASDPNKFRTLSQEYAQLDEVVKVYDGYRRAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML +D ++R A +E+ A+ + E +++ L+LPKD DK N+F+EIRAG
Sbjct: 61 DLEEARLMLTDSDPDVREMAEEEVTTAESFMATAEADLQILMLPKDPKDKSNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W E+IS E GGYKEII R+ G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAESKRWAIEVISERAGEHGGYKEIITRVAGESVYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+ E DE+E+I I DLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMAEPDEVEEIEIRKEDLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVR+THIPTGIVV+CQ++RSQHKN+A A+ +L A++ + ++ + A+ RR L+
Sbjct: 241 TTDSAVRLTHIPTGIVVECQDERSQHKNRARAMSLLQAKLASASEQQLAAEQAEERRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
Length = 360
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ + Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGS 300
>gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|81599266|sp|Q5PCQ9.1|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690759|sp|B5BI75.1|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 360
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DS++RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSSIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
Length = 362
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + + REHS L I E++ YK+
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEITEVWTKYKQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A++EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAEAMLSDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKEII + G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + IN +DLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L +R++ +K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|392554291|ref|ZP_10301428.1| peptide chain release factor 1 [Pseudoalteromonas undina NCIMB
2128]
Length = 361
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V ++ + +E+S L +V+ + Y++ E
Sbjct: 1 MKESVYRKLETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D EMR A +E AK +I +E +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLSSAEEMLKDSDPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPRDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E+++ + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
gi|359439408|ref|ZP_09229379.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20311]
gi|359446999|ref|ZP_09236626.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20439]
gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
gi|358025884|dbj|GAA65628.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20311]
gi|358039136|dbj|GAA72875.1| peptide chain release factor 1 [Pseudoalteromonas sp. BSi20439]
Length = 361
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V ++ + +E+S L +V+ + Y++ E
Sbjct: 1 MKESVYRKLETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D EMR A +E AK +I +E +I+ L+LPKD D N+F+E+RAG
Sbjct: 61 DLSSAEEMLKDSDPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPKDNNNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E+++ + E GGYKE+IA I G VY +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN AD+++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|430377338|ref|ZP_19431471.1| peptide chain release factor 1 [Moraxella macacae 0408225]
gi|429540475|gb|ELA08504.1| peptide chain release factor 1 [Moraxella macacae 0408225]
Length = 360
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ + R +E+ LL+ E ++ K + + EHS L +V ++ + + +
Sbjct: 1 MKESLRVRLDQMADRFEEVTALLSDPETMSDNKKFRQLSVEHSDLSDLVATWHAFIQAED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D +M++ A +EI K +I + + ++LPKD NDK F+EIRAGTG
Sbjct: 61 DLACAEEMLSDPDMKDLAQEEIQSVKAKIDALTEALNVMMLPKDPNDKAMAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY ++++ W+ E++S + +E GGYKEII+R+ G VY +LKFESG
Sbjct: 121 GDEAGIFSGDLFRMYEKYAQSQGWQVEVLSANEAEHGGYKEIISRVSGNGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP+TE+QGR+HTSACTVAV+PE + + + INP+DLRIDTYRASGAGGQHINKT
Sbjct: 181 VHRVQRVPETESQGRVHTSACTVAVMPEIEIDDSVEINPSDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQH NK A+K+L+A+I K+++Q ++ MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQQERSQHANKDKAMKMLVAKIVQEKVQKQIDASSDMRRNLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|352086249|ref|ZP_08953790.1| peptide chain release factor 1 [Rhodanobacter sp. 2APBS1]
gi|351679548|gb|EHA62685.1| peptide chain release factor 1 [Rhodanobacter sp. 2APBS1]
Length = 359
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 219/303 (72%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE ++R +E+ LL+Q EV + + + +E++ L P+ + + ++ +
Sbjct: 8 KLEALAERHEEIGLLLSQPEVLGDNTRFRELSQEYAQLEPVAASLREHDQAERELAETRA 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E+R A+D+++ ++R+ D++ ++ L+LPKD D+ N+++E+RAGTGGDE+A+F
Sbjct: 68 MLDDPELREMAVDDVHRLERRLLDLDDALQLLLLPKDPRDEANLYLEVRAGTGGDEAAIF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+R++E W EI+S E GGYKE++ARI G YS+LKFESG HRVQRV
Sbjct: 128 AGDLLRMYLRYAESRRWHVEILSEHAGEHGGYKEVVARIEGKGAYSRLKFESGTHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGRIHTSA TVA++PE DEI+D+ INPADL++DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRIHTSAATVAILPELDEIDDVEINPADLKVDTFRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTG VV+CQ +RSQHKN+A A+ +L AR+ D +Q + A+ RRL +GS + +
Sbjct: 248 HLPTGTVVECQEERSQHKNRARAMSLLKARLLDEAQSKQSAAQAQERRLQVGSGDRSQRI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|388566383|ref|ZP_10152828.1| peptide chain release factor 1 [Hydrogenophaga sp. PBC]
gi|388266397|gb|EIK91942.1| peptide chain release factor 1 [Hydrogenophaga sp. PBC]
Length = 361
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 211/310 (68%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + L K RL ELD LL+ +V ++I + REH+ +V +++ +
Sbjct: 1 MKPFVRHALLKQRARLHELDALLSAPDVVDDIARFRALSREHAEASEVVSVFDRFLAREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EML D EM A +EI + + ++ +++ L+LP+D +D R F+EIRAGTG
Sbjct: 61 DEQAAREMLRDPEMAAMAQEEIAACETDMAALDGQLQTLLLPRDPDDARPAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R+++R W+ EI+S S SE+GGYKE++ RI G Y +L+FESG
Sbjct: 121 GDESALFAGDLARMYTRYADRQGWRTEIMSESPSELGGYKEVVLRIEGDGAYGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSA TVAV+PE DE I +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSAATVAVMPEPDEAVAIELNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGI +CQ+ RSQH NKA AL++L AR+++ E+ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGITAECQDGRSQHSNKAKALQVLAARLREKDRAERAAKEAATRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254790905|sp|B8GLA1.1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 361
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L +LE S+R +EL LL++ EV ++ + + E+S L P+VE + Y+
Sbjct: 1 MKPSLLHRLEGVSERFQELAGLLSEPEVISDNARFRRLSMEYSQLEPVVEAFRRYEGAQA 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM D + +R A DE A +R+ +ELE++KL++PKD +D N+F+EIRAG
Sbjct: 61 DLTAAREMQKDPDPDLRAMAEDEAATAAERLETLELELQKLLIPKDPHDHSNLFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ EI+S+S E GGYKE+IAR+IG YS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARLIGAGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSA TVAV+PE DE+E INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+TH+PTGIVV+CQ++RSQHKN+A A+ +L A++ +++ QQ+ + R+ L+
Sbjct: 241 KTDSAIRLTHLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAEQARQQAEQSATRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|409393922|ref|ZP_11245193.1| peptide chain release factor 1 [Pseudomonas sp. Chol1]
gi|409394485|ref|ZP_11245678.1| peptide chain release factor 1 [Pseudomonas sp. Chol1]
gi|409120815|gb|EKM97148.1| peptide chain release factor 1 [Pseudomonas sp. Chol1]
gi|409121557|gb|EKM97639.1| peptide chain release factor 1 [Pseudomonas sp. Chol1]
Length = 360
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL E+ ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKPSLLNKLDILQDRFEELTALLGDAEIISDQNRFRAYSREYAEVEPVIAAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDLREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GG+KE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSENEGEHGGFKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|387773833|ref|ZP_10129118.1| peptide chain release factor 1 [Haemophilus parahaemolyticus HK385]
gi|386903654|gb|EIJ68461.1| peptide chain release factor 1 [Haemophilus parahaemolyticus HK385]
Length = 360
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE S+R +EL LL V ++ + +E+S L +V +N +KK+N
Sbjct: 1 MKESIISKLESLSERHEELQALLGDASVISDQDKFRAYSKEYSQLEEVVSTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M+ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEDAQILLDDPDMKEIAEEEIAENKAEIEQLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHLPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|429085189|ref|ZP_19148168.1| Peptide chain release factor 1 [Cronobacter condimenti 1330]
gi|426545653|emb|CCJ74209.1| Peptide chain release factor 1 [Cronobacter condimenti 1330]
Length = 360
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKEKSEALEQQLQLLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G Y +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQAEASTRRNLLGS 300
>gi|386390132|ref|ZP_10074928.1| peptide chain release factor 1 [Haemophilus paraphrohaemolyticus
HK411]
gi|385693816|gb|EIG24448.1| peptide chain release factor 1 [Haemophilus paraphrohaemolyticus
HK411]
Length = 360
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE S+R +EL LL V ++ + +E+S L +V +N +KK+N
Sbjct: 1 MKESIISKLESLSERHEELQALLGDASVISDQDKFRAYSKEYSQLEEVVSTFNRWKKLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ +L+D +M+ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DMEDAQILLDDPDMKEIAEEEIAENKAEIEQLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R+ E W+ E +S + SE GGYKEII +I G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYCESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI + Q + A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|381196497|ref|ZP_09903839.1| peptide chain release factor 1 [Acinetobacter lwoffii WJ10621]
Length = 362
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + + REHS L I E++ YK+
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEIAEVWTKYKQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A++EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAEAMLSDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ E++S + E GGYKEII + G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLYRMYSKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + IN +DLRIDTYRASGAGGQHINKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L +R++ +K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|337280551|ref|YP_004620023.1| peptide chain release factor 1 [Ramlibacter tataouinensis TTB310]
gi|334731628|gb|AEG94004.1| candidate peptide chain release factor 1 [Ramlibacter tataouinensis
TTB310]
Length = 336
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 203/271 (74%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
REH+ + + LY ++ D+ A+EML D +M A +EI A+ + +E E++KL
Sbjct: 9 REHAEVSEVAGLYERLRRREADLAQAQEMLADADMAEMAREEIAAAEAELPALEDELQKL 68
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
+LPKD +D RN+F+E+RAGTGGDESALF DLLRMY R++ER W+ E++S S E+GGY
Sbjct: 69 LLPKDPDDVRNVFLEVRAGTGGDESALFAGDLLRMYTRYAERQGWRCELVSESEGEVGGY 128
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++ R++G Y +LKFESG HRVQRVP TETQGRIHTSACTVA +PE DE + + INP
Sbjct: 129 KEVVVRLVGDGAYGRLKFESGGHRVQRVPATETQGRIHTSACTVAALPEPDEAQAVQINP 188
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
+DLRIDT+RASGAGGQHINKTDSAVRITH+PTGIV +CQ+DRSQH+NKA AL++L ARI+
Sbjct: 189 SDLRIDTFRASGAGGQHINKTDSAVRITHLPTGIVAECQDDRSQHRNKARALQVLAARIR 248
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ + E+ + A R+ LIGS + + +
Sbjct: 249 EQERAERAAKEAATRKGLIGSGDRSDRIRTY 279
>gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032]
gi|429100850|ref|ZP_19162824.1| Peptide chain release factor 1 [Cronobacter turicensis 564]
gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032]
gi|426287499|emb|CCJ88937.1| Peptide chain release factor 1 [Cronobacter turicensis 564]
Length = 360
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DMETARLMLSDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAYVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQAEASTRRNLLGS 300
>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
gi|189039978|sp|A6W1C2.1|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
Length = 362
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 225/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE S R EL LL EV + + +E++ L P+V+ +N +++I+E
Sbjct: 1 MKESIKLKLESLSDRYDELAALLGVAEVIMDQDLFRAYSKEYAELEPVVKCFNEFQQIDE 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I A+ M+ D + ++ ++E + +++L ++KL+LPKD ND RN+F+E+RAG
Sbjct: 61 NIAEAELMMTDADPDIKEMGVEEYKAGLAQKEELQLVLQKLLLPKDPNDSRNVFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL RMY R++E WK EI+S S E GGYKE+IARI+G YSKLKFE
Sbjct: 121 TGGDEASIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARIVGEGAYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE++DI IN +DLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ +RSQHKN+A A+ +L +R++ ++L + S ++ R+ L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEKAASEQSETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|429096682|ref|ZP_19158788.1| Peptide chain release factor 1 [Cronobacter dublinensis 582]
gi|426283022|emb|CCJ84901.1| Peptide chain release factor 1 [Cronobacter dublinensis 582]
Length = 360
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EMR+ A DE+ AK + +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DMETARLLLSDPEMRDMAQDELLEAKTKSEALEQELQLLLLPKDPDDERNAFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSASDGEHGGYKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAETAKRQQAEASTRRNLLGS 300
>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
Length = 362
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|440287296|ref|YP_007340061.1| peptide chain release factor 1 [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046818|gb|AGB77876.1| peptide chain release factor 1 [Enterobacteriaceae bacterium strain
FGI 57]
Length = 360
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL E + + + RE++ L + Y +++++ +
Sbjct: 1 MKPSIVAKLEALYERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCYTDWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK R ++E +++ L+LP+D +D+RN ++E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELQDAKAREEELEQQLQVLLLPRDPDDERNAYVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S + E GG+KE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSANEGEHGGFKEVIAKISGEGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP++LRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPSELRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ ++Q A RR L+G+
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEMAKRQQAEASTRRNLLGT 300
>gi|375111026|ref|ZP_09757238.1| peptide chain release factor 1 [Alishewanella jeotgali KCTC 22429]
gi|397169695|ref|ZP_10493126.1| peptide chain release factor 1 [Alishewanella aestuarii B11]
gi|374568856|gb|EHR40027.1| peptide chain release factor 1 [Alishewanella jeotgali KCTC 22429]
gi|396088683|gb|EJI86262.1| peptide chain release factor 1 [Alishewanella aestuarii B11]
Length = 363
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 222/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V ++ K + + +E S L + + + +Y++ E
Sbjct: 1 MKESVYRKLEGLVERYEEVQALLSDASVISDQKRFRELSKEFSQLEELSKAFRSYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +E LAK RI ++ +++ L+LPKD ND + F+EIRAG
Sbjct: 61 DLLMAEEMQKDSDPEMREMAQEEYKLAKSRIEQLDTDLQILLLPKDPNDNNSCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+ER W+ EI+S + E GG+KE+IA + G V+ LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERQRWRVEIVSANEGEHGGFKEVIASVQGEGVFGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I INPADL+IDTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPESEAIEINPADLKIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
+TDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L +R++ D K R ++ +T RR
Sbjct: 241 RTDSAIRITHLPSGIVVECQDERSQHKNRARAMSVLASRLQAAEDEKRRLEEQST---RR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|419837892|ref|ZP_14361330.1| peptide chain release factor 1 [Vibrio cholerae HC-46B1]
gi|421343895|ref|ZP_15794298.1| peptide chain release factor 1 [Vibrio cholerae HC-43B1]
gi|421354836|ref|ZP_15805168.1| peptide chain release factor 1 [Vibrio cholerae HE-45]
gi|423735847|ref|ZP_17709041.1| peptide chain release factor 1 [Vibrio cholerae HC-41B1]
gi|424010185|ref|ZP_17753119.1| peptide chain release factor 1 [Vibrio cholerae HC-44C1]
gi|395939975|gb|EJH50656.1| peptide chain release factor 1 [Vibrio cholerae HC-43B1]
gi|395953961|gb|EJH64574.1| peptide chain release factor 1 [Vibrio cholerae HE-45]
gi|408629471|gb|EKL02163.1| peptide chain release factor 1 [Vibrio cholerae HC-41B1]
gi|408856440|gb|EKL96135.1| peptide chain release factor 1 [Vibrio cholerae HC-46B1]
gi|408863437|gb|EKM02920.1| peptide chain release factor 1 [Vibrio cholerae HC-44C1]
Length = 362
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23]
gi|386083968|ref|YP_006000250.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417557358|ref|ZP_12208397.1| Protein chain release factor A PrfA [Xylella fastidiosa EB92.1]
gi|32129935|sp|Q87A17.1|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238691124|sp|B2IA85.1|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23]
gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338180022|gb|EGO82929.1| Protein chain release factor A PrfA [Xylella fastidiosa EB92.1]
Length = 361
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +EL+ LL+ ++ ++ + RE + L PI +
Sbjct: 1 MKPTLRRKLEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ + D EMR A EI +A+ + ++ ++++L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLAAAETLRTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F +L RMY R++ER WK E+ S + E GGYKEIIARI+G YS+LKFESG
Sbjct: 121 GDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEADEI DI+INPADL+IDT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+PTG+VV+ Q +RSQH N+ A+K L A++ +S+ +Q + A R+L +GS
Sbjct: 241 ESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESQRSQQATAEAMTRKLQVGS 300
>gi|398804362|ref|ZP_10563357.1| peptide chain release factor 1 [Polaromonas sp. CF318]
gi|398094081|gb|EJL84452.1| peptide chain release factor 1 [Polaromonas sp. CF318]
Length = 373
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 171/320 (53%), Positives = 216/320 (67%), Gaps = 10/320 (3%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + L++ RL ELD LL+ +V +++ + REH+ + E Y
Sbjct: 1 MKPFLRQTLDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYMRLTSREA 60
Query: 61 DIITAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
D+ +A+ ML +D EM A +EI AK I I+ ++ +++PKD +D R F+EIR
Sbjct: 61 DLHSAESMLAEARDDPEMAAMAEEEIAAAKADIAQIDEALQLMLIPKDPDDVRPAFVEIR 120
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI------IGLN 170
AGTGGDESALF DL RMY RF+ERN W+ EIIS S SE+GGYKE++ RI +G+
Sbjct: 121 AGTGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRIEGAADAMGVG 180
Query: 171 VYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRAS 230
VY KL+FESG HRVQRVP TETQGRIHTSACTVAV+PE DE I INPADLRIDTYRAS
Sbjct: 181 VYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAVAIQINPADLRIDTYRAS 240
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNT 290
GAGGQHINKTDSAVRITHIPTGIV +CQ RSQH NKA ALK+L ARI + E+ +
Sbjct: 241 GAGGQHINKTDSAVRITHIPTGIVAECQEGRSQHSNKAQALKVLTARIHEKDRAERAAKD 300
Query: 291 AKMRRLLIGSVQKKSPLNIF 310
A +R+ L+G+ + + +
Sbjct: 301 AALRKGLVGTGDRSDRIRTY 320
>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
Length = 351
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 149/299 (49%), Positives = 220/299 (73%), Gaps = 2/299 (0%)
Query: 14 KRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML--ND 71
+R +E+ LL++ V + + +E++ L PI Y Y + +++ + +E+L D
Sbjct: 3 ERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLEELLAGED 62
Query: 72 LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDL 131
E+ A +E+ AK+++ +++ +++ ++PKD +D+RNI++EIRAGTGGDE+A+F DL
Sbjct: 63 KELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIFAGDL 122
Query: 132 LRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTE 191
RMYIR++E W+ E+IS S E GGYKEII RI G VYS+LKFESG HRVQRVP+TE
Sbjct: 123 YRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRVPETE 182
Query: 192 TQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
+QGR+HTSACTVA++PE DEI+DI INP DLRIDTYR+SGAGGQH+NKTDSA+RITHIPT
Sbjct: 183 SQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRITHIPT 242
Query: 252 GIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
G+VV+CQ++RSQHKN++ A+ +L R+ D++ +Q+ A+ R+ L+G+ + + +
Sbjct: 243 GVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDRSERIRTY 301
>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
Length = 362
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
ecotype']
gi|410861179|ref|YP_006976413.1| peptide chain release factor 1 [Alteromonas macleodii AltDE1]
gi|238693241|sp|B4RSV6.1|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818441|gb|AFV85058.1| peptide chain release factor 1 [Alteromonas macleodii AltDE1]
Length = 361
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 215/302 (71%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL EV + + +E S L +V +N Y++ E
Sbjct: 1 MKESVVRKLEHLVERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +A+EMLN D EMR A +E+ AK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 NLASAQEMLNEDDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+++ + SE GGYKE++A + G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ + ++ + A R+ L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12]
gi|238687964|sp|B0U5Z3.1|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12]
Length = 361
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +EL+ LL+ ++ ++ + RE + L PI +
Sbjct: 1 MKPTLRRKLEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ + D EMR A EI +A+ + ++ ++++L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLAAAETLRTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F +L RMY R++ER WK E+ S + E GGYKEIIARI+G YS+LKFESG
Sbjct: 121 GDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEADEI DI+INPADL+IDT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+PTG+VV+ Q +RSQH N+ A+K L A++ +S+ +Q + A R+L +GS
Sbjct: 241 ESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERSQQATAEAMTRKLQVGS 300
>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
AK-01]
gi|226739100|sp|B8FEA2.1|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
AK-01]
Length = 355
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 217/308 (70%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML +LE +R E++ LL+ ++ + K Y K VREH+ L +VE Y YK++ E +
Sbjct: 1 MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60
Query: 65 AKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+KE+L D + +++ A +EI+ K +E E+K L+LPKD ND +N+ +EIRAGTGGD
Sbjct: 61 SKELLKDPDPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ LF DL RMY R++E WK E +S L+ +GG KEI A I G VYS KFESG H
Sbjct: 121 EAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE QGRIHTSACTVAV+PEA+E+ DI I+P+++R+D YR+ GAGGQH+N TDS
Sbjct: 181 RVQRVPVTEAQGRIHTSACTVAVLPEAEEV-DIQIDPSEIRVDVYRSQGAGGQHVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVR+TH+PTG+VV CQ+++SQHKNKA A+K+L AR+ D ++EQ ++ + R+ +GS
Sbjct: 240 AVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQNASISAERKSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP]
gi|46576749|sp|Q7VMV9.1|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP]
Length = 360
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 214/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL+ S+R +EL LL V + + +E++ L +V +N +KK+N
Sbjct: 1 MKASIIHKLDCLSERHEELQALLGDASVIADQDKFRAYSKEYAQLEEVVATFNRWKKLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +L+D +M+ A +EI K I +E ++ L+LPKD ND+ N F+EIRAGTG
Sbjct: 61 DIEEAELLLDDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E +S + SE GGYKEII +I G +VY +LKFESG
Sbjct: 121 GDEAGIFAGDLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ++RSQHKNKA AL +L +RI + Q A RR L+G+
Sbjct: 241 DSAVRITHLPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAMAQADTRRNLLGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
gi|259585215|sp|C1DEV0.1|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
Length = 360
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV + +E++ + P+V Y ++K+ +
Sbjct: 1 MKASLLNKLDLLHDRYEELTALLGDAEVIAEQGRFRAYSKEYAEVEPVVAAYREFRKVRD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D ++R A +E+ A++R+ +E +++++LP+D ND RN+F+EIRAG
Sbjct: 61 DLAGAQALLKDSDPDLREMAAEEVAEARERLAGLEDRLQRMLLPRDPNDARNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S + E GGYKEII R+ G NVY KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEIITRVEGDNVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE I INPA+LR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ L A+++D + ++ RRLL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHREISETRRLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|384084417|ref|ZP_09995592.1| peptide chain release factor 1 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 364
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 159/299 (53%), Positives = 218/299 (72%), Gaps = 3/299 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+ +LE+ + R +EL +LT E+ N+ + + RE + PI++L +++ D
Sbjct: 7 LQGQLEQLAFRFEELSQMLTSPELVNDTQRFQSLSRELGEISPILDLLRRHEQRQRDHDE 66
Query: 65 AKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A++ML D ++R A DE+ A K + ++E ++ +LPKD ND+RN+F+E+RAGTGG
Sbjct: 67 AEKMLLEERDPDLREMAHDELASANKDLEELEESLRLRLLPKDPNDERNVFVEVRAGTGG 126
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL+RMY R++E + ++S S SE GGYKE + I G YS+LKFESG
Sbjct: 127 EEAALFAGDLVRMYTRYAESQGFTVLLLSASESERGGYKEAVLEISGRGAYSRLKFESGG 186
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE QGRIHTSACTVAV+PE D + +ININPADLRIDT+RASGAGGQHINKTD
Sbjct: 187 HRVQRVPETEAQGRIHTSACTVAVLPEVDTVSEININPADLRIDTFRASGAGGQHINKTD 246
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SA+RITHIP+G+VV CQ DRSQHKN+A A+ +L AR+ +++ +QQS+ A+ RRLLIGS
Sbjct: 247 SAIRITHIPSGLVVACQEDRSQHKNRAKAMALLQARLLETEQEKQQSSAAQTRRLLIGS 305
>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
gi|449146778|ref|ZP_21777540.1| Peptide chain release factor 1 [Vibrio mimicus CAIM 602]
gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
gi|449077631|gb|EMB48603.1| Peptide chain release factor 1 [Vibrio mimicus CAIM 602]
Length = 362
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|419830631|ref|ZP_14354116.1| peptide chain release factor 1 [Vibrio cholerae HC-1A2]
gi|419834313|ref|ZP_14357768.1| peptide chain release factor 1 [Vibrio cholerae HC-61A2]
gi|422308120|ref|ZP_16395273.1| peptide chain release factor 1 [Vibrio cholerae CP1035(8)]
gi|422918020|ref|ZP_16952338.1| peptide chain release factor 1 [Vibrio cholerae HC-02A1]
gi|423822922|ref|ZP_17716932.1| peptide chain release factor 1 [Vibrio cholerae HC-55C2]
gi|423856886|ref|ZP_17720738.1| peptide chain release factor 1 [Vibrio cholerae HC-59A1]
gi|423883189|ref|ZP_17724326.1| peptide chain release factor 1 [Vibrio cholerae HC-60A1]
gi|423998446|ref|ZP_17741698.1| peptide chain release factor 1 [Vibrio cholerae HC-02C1]
gi|424017340|ref|ZP_17757169.1| peptide chain release factor 1 [Vibrio cholerae HC-55B2]
gi|424020264|ref|ZP_17760050.1| peptide chain release factor 1 [Vibrio cholerae HC-59B1]
gi|424625641|ref|ZP_18064102.1| peptide chain release factor 1 [Vibrio cholerae HC-50A1]
gi|424630124|ref|ZP_18068411.1| peptide chain release factor 1 [Vibrio cholerae HC-51A1]
gi|424634171|ref|ZP_18072271.1| peptide chain release factor 1 [Vibrio cholerae HC-52A1]
gi|424637249|ref|ZP_18075257.1| peptide chain release factor 1 [Vibrio cholerae HC-55A1]
gi|424641158|ref|ZP_18079041.1| peptide chain release factor 1 [Vibrio cholerae HC-56A1]
gi|424649226|ref|ZP_18086889.1| peptide chain release factor 1 [Vibrio cholerae HC-57A1]
gi|443528140|ref|ZP_21094188.1| peptide chain release factor 1 [Vibrio cholerae HC-78A1]
gi|341636902|gb|EGS61596.1| peptide chain release factor 1 [Vibrio cholerae HC-02A1]
gi|408011751|gb|EKG49555.1| peptide chain release factor 1 [Vibrio cholerae HC-50A1]
gi|408017835|gb|EKG55316.1| peptide chain release factor 1 [Vibrio cholerae HC-52A1]
gi|408022947|gb|EKG60131.1| peptide chain release factor 1 [Vibrio cholerae HC-56A1]
gi|408023380|gb|EKG60552.1| peptide chain release factor 1 [Vibrio cholerae HC-55A1]
gi|408032175|gb|EKG68767.1| peptide chain release factor 1 [Vibrio cholerae HC-57A1]
gi|408054578|gb|EKG89546.1| peptide chain release factor 1 [Vibrio cholerae HC-51A1]
gi|408618609|gb|EKK91682.1| peptide chain release factor 1 [Vibrio cholerae CP1035(8)]
gi|408620404|gb|EKK93416.1| peptide chain release factor 1 [Vibrio cholerae HC-1A2]
gi|408634898|gb|EKL07133.1| peptide chain release factor 1 [Vibrio cholerae HC-55C2]
gi|408640491|gb|EKL12283.1| peptide chain release factor 1 [Vibrio cholerae HC-59A1]
gi|408641313|gb|EKL13094.1| peptide chain release factor 1 [Vibrio cholerae HC-60A1]
gi|408649135|gb|EKL20452.1| peptide chain release factor 1 [Vibrio cholerae HC-61A2]
gi|408852801|gb|EKL92623.1| peptide chain release factor 1 [Vibrio cholerae HC-02C1]
gi|408859848|gb|EKL99502.1| peptide chain release factor 1 [Vibrio cholerae HC-55B2]
gi|408867358|gb|EKM06720.1| peptide chain release factor 1 [Vibrio cholerae HC-59B1]
gi|443453656|gb|ELT17475.1| peptide chain release factor 1 [Vibrio cholerae HC-78A1]
Length = 362
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
Length = 362
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
Length = 362
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 360
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L A I ++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKRQQAEASTRRNLLGS 300
>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
Length = 359
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 208/291 (71%), Gaps = 3/291 (1%)
Query: 22 LLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLN--DLEMRNFAL 79
LL+ EV N ++ K +EHS L +V Y YKKI DI KE+L D EMR A
Sbjct: 20 LLSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79
Query: 80 DEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFS 139
E+ + R +E EIK L+LPKD ND +N+ +EIRAGTGGDESALF DL RMY RF+
Sbjct: 80 AELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139
Query: 140 ERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTS 199
E N W+ EIIS S SE GG+KE+IA + G V++KLK+ESG HRVQRVP+TE QGRIHTS
Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199
Query: 200 ACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQN 259
ACTVAV+PEA+++ DI+INPADL+ID YR+SGAGGQH+N TDSAVRITH+PTG VV CQ
Sbjct: 200 ACTVAVMPEAEDV-DIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258
Query: 260 DRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+RSQ KN+A A+K+L +RI D+ + EQ + A R+ +GS + + +
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNIVMEQNAKLAADRKSQVGSGDRSERIRTY 309
>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
gi|227118625|ref|YP_002820521.1| peptide chain release factor 1 [Vibrio cholerae O395]
gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
gi|360036056|ref|YP_004937819.1| peptide chain release factor 1 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741990|ref|YP_005333959.1| peptide chain release factor 1 [Vibrio cholerae IEC224]
gi|384425148|ref|YP_005634506.1| Peptide chain release factor 1 [Vibrio cholerae LMA3984-4]
gi|417814208|ref|ZP_12460861.1| peptide chain release factor 1 [Vibrio cholerae HC-49A2]
gi|417817945|ref|ZP_12464574.1| peptide chain release factor 1 [Vibrio cholerae HCUF01]
gi|417825416|ref|ZP_12472004.1| peptide chain release factor 1 [Vibrio cholerae HE48]
gi|418335187|ref|ZP_12944100.1| peptide chain release factor 1 [Vibrio cholerae HC-06A1]
gi|418338799|ref|ZP_12947693.1| peptide chain release factor 1 [Vibrio cholerae HC-23A1]
gi|418346721|ref|ZP_12951481.1| peptide chain release factor 1 [Vibrio cholerae HC-28A1]
gi|418350483|ref|ZP_12955214.1| peptide chain release factor 1 [Vibrio cholerae HC-43A1]
gi|418356235|ref|ZP_12958954.1| peptide chain release factor 1 [Vibrio cholerae HC-61A1]
gi|419827139|ref|ZP_14350638.1| peptide chain release factor 1 [Vibrio cholerae CP1033(6)]
gi|421317810|ref|ZP_15768378.1| peptide chain release factor 1 [Vibrio cholerae CP1032(5)]
gi|421321935|ref|ZP_15772488.1| peptide chain release factor 1 [Vibrio cholerae CP1038(11)]
gi|421325738|ref|ZP_15776262.1| peptide chain release factor 1 [Vibrio cholerae CP1041(14)]
gi|421329397|ref|ZP_15779907.1| peptide chain release factor 1 [Vibrio cholerae CP1042(15)]
gi|421333303|ref|ZP_15783780.1| peptide chain release factor 1 [Vibrio cholerae CP1046(19)]
gi|421336894|ref|ZP_15787355.1| peptide chain release factor 1 [Vibrio cholerae CP1048(21)]
gi|421340321|ref|ZP_15790753.1| peptide chain release factor 1 [Vibrio cholerae HC-20A2]
gi|421348202|ref|ZP_15798579.1| peptide chain release factor 1 [Vibrio cholerae HC-46A1]
gi|421351901|ref|ZP_15802266.1| peptide chain release factor 1 [Vibrio cholerae HE-25]
gi|422897277|ref|ZP_16934723.1| peptide chain release factor 1 [Vibrio cholerae HC-40A1]
gi|422903471|ref|ZP_16938445.1| peptide chain release factor 1 [Vibrio cholerae HC-48A1]
gi|422907355|ref|ZP_16942158.1| peptide chain release factor 1 [Vibrio cholerae HC-70A1]
gi|422914204|ref|ZP_16948710.1| peptide chain release factor 1 [Vibrio cholerae HFU-02]
gi|422923481|ref|ZP_16956632.1| peptide chain release factor 1 [Vibrio cholerae BJG-01]
gi|422926408|ref|ZP_16959422.1| peptide chain release factor 1 [Vibrio cholerae HC-38A1]
gi|423145731|ref|ZP_17133325.1| peptide chain release factor 1 [Vibrio cholerae HC-19A1]
gi|423150407|ref|ZP_17137721.1| peptide chain release factor 1 [Vibrio cholerae HC-21A1]
gi|423154225|ref|ZP_17141406.1| peptide chain release factor 1 [Vibrio cholerae HC-22A1]
gi|423157309|ref|ZP_17144402.1| peptide chain release factor 1 [Vibrio cholerae HC-32A1]
gi|423160879|ref|ZP_17147819.1| peptide chain release factor 1 [Vibrio cholerae HC-33A2]
gi|423165705|ref|ZP_17152430.1| peptide chain release factor 1 [Vibrio cholerae HC-48B2]
gi|423731722|ref|ZP_17705025.1| peptide chain release factor 1 [Vibrio cholerae HC-17A1]
gi|423769007|ref|ZP_17713149.1| peptide chain release factor 1 [Vibrio cholerae HC-50A2]
gi|423895607|ref|ZP_17727354.1| peptide chain release factor 1 [Vibrio cholerae HC-62A1]
gi|423931043|ref|ZP_17731746.1| peptide chain release factor 1 [Vibrio cholerae HC-77A1]
gi|424003159|ref|ZP_17746234.1| peptide chain release factor 1 [Vibrio cholerae HC-17A2]
gi|424006947|ref|ZP_17749917.1| peptide chain release factor 1 [Vibrio cholerae HC-37A1]
gi|424024929|ref|ZP_17764580.1| peptide chain release factor 1 [Vibrio cholerae HC-62B1]
gi|424027816|ref|ZP_17767419.1| peptide chain release factor 1 [Vibrio cholerae HC-69A1]
gi|424587094|ref|ZP_18026673.1| peptide chain release factor 1 [Vibrio cholerae CP1030(3)]
gi|424591886|ref|ZP_18031311.1| peptide chain release factor 1 [Vibrio cholerae CP1037(10)]
gi|424595743|ref|ZP_18035063.1| peptide chain release factor 1 [Vibrio cholerae CP1040(13)]
gi|424599659|ref|ZP_18038838.1| peptide chain release factor 1 [Vibrio Cholerae CP1044(17)]
gi|424602377|ref|ZP_18041518.1| peptide chain release factor 1 [Vibrio cholerae CP1047(20)]
gi|424607352|ref|ZP_18046294.1| peptide chain release factor 1 [Vibrio cholerae CP1050(23)]
gi|424611172|ref|ZP_18050011.1| peptide chain release factor 1 [Vibrio cholerae HC-39A1]
gi|424613984|ref|ZP_18052772.1| peptide chain release factor 1 [Vibrio cholerae HC-41A1]
gi|424617960|ref|ZP_18056632.1| peptide chain release factor 1 [Vibrio cholerae HC-42A1]
gi|424622744|ref|ZP_18061249.1| peptide chain release factor 1 [Vibrio cholerae HC-47A1]
gi|424645708|ref|ZP_18083444.1| peptide chain release factor 1 [Vibrio cholerae HC-56A2]
gi|424653475|ref|ZP_18090855.1| peptide chain release factor 1 [Vibrio cholerae HC-57A2]
gi|424657297|ref|ZP_18094582.1| peptide chain release factor 1 [Vibrio cholerae HC-81A2]
gi|429888058|ref|ZP_19369555.1| Peptide chain release factor 1 [Vibrio cholerae PS15]
gi|440710369|ref|ZP_20891019.1| peptide chain release factor 1 [Vibrio cholerae 4260B]
gi|443504526|ref|ZP_21071484.1| peptide chain release factor 1 [Vibrio cholerae HC-64A1]
gi|443508427|ref|ZP_21075189.1| peptide chain release factor 1 [Vibrio cholerae HC-65A1]
gi|443512271|ref|ZP_21078908.1| peptide chain release factor 1 [Vibrio cholerae HC-67A1]
gi|443515824|ref|ZP_21082335.1| peptide chain release factor 1 [Vibrio cholerae HC-68A1]
gi|443519617|ref|ZP_21086013.1| peptide chain release factor 1 [Vibrio cholerae HC-71A1]
gi|443524508|ref|ZP_21090721.1| peptide chain release factor 1 [Vibrio cholerae HC-72A2]
gi|443532104|ref|ZP_21098118.1| peptide chain release factor 1 [Vibrio cholerae HC-7A1]
gi|443535910|ref|ZP_21101783.1| peptide chain release factor 1 [Vibrio cholerae HC-80A1]
gi|443539446|ref|ZP_21105300.1| peptide chain release factor 1 [Vibrio cholerae HC-81A1]
gi|449055408|ref|ZP_21734076.1| Peptide chain release factor 1 [Vibrio cholerae O1 str. Inaba
G4222]
gi|20139356|sp|Q9KQ25.1|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|172047628|sp|A5F696.1|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790906|sp|C3LPI4.1|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3984-4]
gi|340036694|gb|EGQ97670.1| peptide chain release factor 1 [Vibrio cholerae HC-49A2]
gi|340037668|gb|EGQ98643.1| peptide chain release factor 1 [Vibrio cholerae HCUF01]
gi|340046901|gb|EGR07831.1| peptide chain release factor 1 [Vibrio cholerae HE48]
gi|341620915|gb|EGS46669.1| peptide chain release factor 1 [Vibrio cholerae HC-48A1]
gi|341621115|gb|EGS46867.1| peptide chain release factor 1 [Vibrio cholerae HC-70A1]
gi|341621667|gb|EGS47406.1| peptide chain release factor 1 [Vibrio cholerae HC-40A1]
gi|341637107|gb|EGS61799.1| peptide chain release factor 1 [Vibrio cholerae HFU-02]
gi|341644021|gb|EGS68271.1| peptide chain release factor 1 [Vibrio cholerae BJG-01]
gi|341646190|gb|EGS70308.1| peptide chain release factor 1 [Vibrio cholerae HC-38A1]
gi|356417211|gb|EHH70830.1| peptide chain release factor 1 [Vibrio cholerae HC-06A1]
gi|356418114|gb|EHH71721.1| peptide chain release factor 1 [Vibrio cholerae HC-21A1]
gi|356422569|gb|EHH76043.1| peptide chain release factor 1 [Vibrio cholerae HC-19A1]
gi|356428208|gb|EHH81437.1| peptide chain release factor 1 [Vibrio cholerae HC-22A1]
gi|356430441|gb|EHH83650.1| peptide chain release factor 1 [Vibrio cholerae HC-23A1]
gi|356433026|gb|EHH86221.1| peptide chain release factor 1 [Vibrio cholerae HC-28A1]
gi|356439583|gb|EHH92552.1| peptide chain release factor 1 [Vibrio cholerae HC-32A1]
gi|356444979|gb|EHH97788.1| peptide chain release factor 1 [Vibrio cholerae HC-43A1]
gi|356445396|gb|EHH98203.1| peptide chain release factor 1 [Vibrio cholerae HC-33A2]
gi|356450517|gb|EHI03237.1| peptide chain release factor 1 [Vibrio cholerae HC-48B2]
gi|356452733|gb|EHI05412.1| peptide chain release factor 1 [Vibrio cholerae HC-61A1]
gi|356647210|gb|AET27265.1| peptide chain release factor 1 [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795500|gb|AFC58971.1| peptide chain release factor 1 [Vibrio cholerae IEC224]
gi|395916068|gb|EJH26898.1| peptide chain release factor 1 [Vibrio cholerae CP1032(5)]
gi|395917576|gb|EJH28404.1| peptide chain release factor 1 [Vibrio cholerae CP1041(14)]
gi|395918929|gb|EJH29753.1| peptide chain release factor 1 [Vibrio cholerae CP1038(11)]
gi|395927931|gb|EJH38694.1| peptide chain release factor 1 [Vibrio cholerae CP1042(15)]
gi|395928705|gb|EJH39458.1| peptide chain release factor 1 [Vibrio cholerae CP1046(19)]
gi|395931993|gb|EJH42737.1| peptide chain release factor 1 [Vibrio cholerae CP1048(21)]
gi|395939604|gb|EJH50286.1| peptide chain release factor 1 [Vibrio cholerae HC-20A2]
gi|395942781|gb|EJH53457.1| peptide chain release factor 1 [Vibrio cholerae HC-46A1]
gi|395952346|gb|EJH62960.1| peptide chain release factor 1 [Vibrio cholerae HE-25]
gi|395958559|gb|EJH69043.1| peptide chain release factor 1 [Vibrio cholerae HC-56A2]
gi|395958960|gb|EJH69412.1| peptide chain release factor 1 [Vibrio cholerae HC-57A2]
gi|395961700|gb|EJH72014.1| peptide chain release factor 1 [Vibrio cholerae HC-42A1]
gi|395970522|gb|EJH80277.1| peptide chain release factor 1 [Vibrio cholerae HC-47A1]
gi|395972694|gb|EJH82276.1| peptide chain release factor 1 [Vibrio cholerae CP1030(3)]
gi|395975523|gb|EJH85014.1| peptide chain release factor 1 [Vibrio cholerae CP1047(20)]
gi|408006824|gb|EKG44945.1| peptide chain release factor 1 [Vibrio cholerae HC-39A1]
gi|408012341|gb|EKG50125.1| peptide chain release factor 1 [Vibrio cholerae HC-41A1]
gi|408030245|gb|EKG66914.1| peptide chain release factor 1 [Vibrio cholerae CP1037(10)]
gi|408031513|gb|EKG68131.1| peptide chain release factor 1 [Vibrio cholerae CP1040(13)]
gi|408041271|gb|EKG77388.1| peptide chain release factor 1 [Vibrio Cholerae CP1044(17)]
gi|408042599|gb|EKG78644.1| peptide chain release factor 1 [Vibrio cholerae CP1050(23)]
gi|408052642|gb|EKG87672.1| peptide chain release factor 1 [Vibrio cholerae HC-81A2]
gi|408607929|gb|EKK81332.1| peptide chain release factor 1 [Vibrio cholerae CP1033(6)]
gi|408622959|gb|EKK95921.1| peptide chain release factor 1 [Vibrio cholerae HC-17A1]
gi|408633467|gb|EKL05811.1| peptide chain release factor 1 [Vibrio cholerae HC-50A2]
gi|408654475|gb|EKL25617.1| peptide chain release factor 1 [Vibrio cholerae HC-77A1]
gi|408655407|gb|EKL26532.1| peptide chain release factor 1 [Vibrio cholerae HC-62A1]
gi|408845555|gb|EKL85671.1| peptide chain release factor 1 [Vibrio cholerae HC-37A1]
gi|408845693|gb|EKL85808.1| peptide chain release factor 1 [Vibrio cholerae HC-17A2]
gi|408870231|gb|EKM09511.1| peptide chain release factor 1 [Vibrio cholerae HC-62B1]
gi|408879119|gb|EKM18112.1| peptide chain release factor 1 [Vibrio cholerae HC-69A1]
gi|429224896|gb|EKY31206.1| Peptide chain release factor 1 [Vibrio cholerae PS15]
gi|439974059|gb|ELP50255.1| peptide chain release factor 1 [Vibrio cholerae 4260B]
gi|443431471|gb|ELS74023.1| peptide chain release factor 1 [Vibrio cholerae HC-64A1]
gi|443435047|gb|ELS81192.1| peptide chain release factor 1 [Vibrio cholerae HC-65A1]
gi|443438873|gb|ELS88589.1| peptide chain release factor 1 [Vibrio cholerae HC-67A1]
gi|443443234|gb|ELS96536.1| peptide chain release factor 1 [Vibrio cholerae HC-68A1]
gi|443447035|gb|ELT03691.1| peptide chain release factor 1 [Vibrio cholerae HC-71A1]
gi|443449842|gb|ELT10133.1| peptide chain release factor 1 [Vibrio cholerae HC-72A2]
gi|443457494|gb|ELT24891.1| peptide chain release factor 1 [Vibrio cholerae HC-7A1]
gi|443460978|gb|ELT32056.1| peptide chain release factor 1 [Vibrio cholerae HC-80A1]
gi|443465546|gb|ELT40206.1| peptide chain release factor 1 [Vibrio cholerae HC-81A1]
gi|448264447|gb|EMB01684.1| Peptide chain release factor 1 [Vibrio cholerae O1 str. Inaba
G4222]
Length = 362
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
Length = 362
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSRDRSDRIRTY 312
>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
LSR1]
gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
LSR1]
Length = 360
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +E++ L EV ++ + RE++ L I + + + E
Sbjct: 1 MKFSIVTKLQALQERYEEVEAHLGDAEVISDQLRFRTLSREYAQLKDISLCFKQWDGLQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TAK+ML+DLEMR A DE+ AK R +E +++ L+LP+D +D+R+ F+EIRAGTG
Sbjct: 61 DIETAKKMLDDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK E+I+ + E GGYKE+I +I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+P E E + I+ DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A +L ARI++++ +++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQASERRNLLGS 300
>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii Q321]
gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
gi|30581025|sp|P47849.2|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039967|sp|A9KGY3.1|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039968|sp|A9N9K2.1|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238058710|sp|B6J625.1|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
RSA 493]
gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
Dugway 5J108-111]
gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii Q321]
gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
CbuK_Q154]
Length = 361
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/302 (50%), Positives = 220/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL+ + R E+ LL+ V N+ Y + +E++ L PIV+ + +++ +
Sbjct: 1 MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +A+EM D E+R A +E+ + ++E ++K L++PKD ND+RN+F+EIRAG
Sbjct: 61 AIESAEEMQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+A+F DL RMY R++E W+ I+S E GG+KE+IAR+IG VYS+LKFE
Sbjct: 121 TGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DEI+ I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L +++ ++ +Q A R+ L+
Sbjct: 241 RTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|387771142|ref|ZP_10127309.1| peptide chain release factor 1 [Pasteurella bettyae CCUG 2042]
gi|386902613|gb|EIJ67449.1| peptide chain release factor 1 [Pasteurella bettyae CCUG 2042]
Length = 360
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ ++R +EL+ LL ++ + +E+S L +V+ + +K++N
Sbjct: 1 MKPSIITKLDSLNERYEELEALLGDPATISDQDKFRAYSKEYSQLEEVVKTFARWKQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K + +++ ++ L+LP+D ND+ N ++EIRAGTG
Sbjct: 61 NIEEAELLLDDPEMKEMAQMEIEESKTELEEVDQHLQILLLPRDPNDEYNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GGYKEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAEMKGWRVEVLSENESEQGGYKEIIALVTGDTVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+VV+CQ++RSQHKNKA A+ +L +R+ ++ + + A RR L+GS
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKAMAVLASRLVQAEQDKLAAEQATTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|410664416|ref|YP_006916787.1| peptide chain release factor 1 [Simiduia agarivorans SA1 = DSM
21679]
gi|409026773|gb|AFU99057.1| peptide chain release factor 1 [Simiduia agarivorans SA1 = DSM
21679]
Length = 362
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + R +E+ LL+ ++ + + RE++ L P+++ + Y +
Sbjct: 1 MKDSIRLKLESLADRYEEVSALLSDPDIIGDQNRFRDLSREYAELEPVIQCFRKYLSLTA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D AKE+L +D EMR A I+ +++ + E++ L+LPKD ND +N+++EIRAG
Sbjct: 61 DRNEAKELLKDSDPEMREMAQMTIDECDEQLEPLAAELQVLLLPKDPNDHKNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++E W+ EI+S S E GGYKEII R++G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSKYAESRGWRIEIMSESAGEHGGYKEIITRVVGQGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE E++N+N DLRIDT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEQEEVNLNKNDLRIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RI HIPTGIVV+CQ++RSQHKNKA A+ +L A+I S+ + + A RR L+
Sbjct: 241 TTDSAIRIVHIPTGIVVECQDERSQHKNKARAMSLLAAKIASSQQEQAAAAIASERRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
gi|387154537|ref|YP_005703473.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
gi|61214640|sp|Q727E1.1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223554|sp|A1VAK8.1|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
vulgaris DP4]
gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
Length = 357
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 218/308 (70%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE + ++L+ L+ EV N+ Y K + H+ L +V+ + YK++ +++
Sbjct: 1 MFAKLENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLAD 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KE+L +D E+R A +EI + + DIE E+K L+LP+D D +NI +EIRAGTGG+
Sbjct: 61 NKELLGDSDHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E++LF DL RMY R++E WK E++S S S+ GGYKEIIA I G VYS+LK+ESG H
Sbjct: 121 EASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE QGRIHTSA TVAV+PEA+E+ D++I P DLRID YRASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMPEAEEV-DVDIRPDDLRIDVYRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITH+PTGIVV CQ+++SQHKNKA A+K+L++R+ ++ S A RR L+GS
Sbjct: 240 AVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERAHSVIADARRALVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|416050688|ref|ZP_11577064.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|418465106|ref|ZP_13036043.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|347993878|gb|EGY35207.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|359756038|gb|EHK90197.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 360
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 223/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|424660682|ref|ZP_18097929.1| peptide chain release factor 1 [Vibrio cholerae HE-16]
gi|408050250|gb|EKG85420.1| peptide chain release factor 1 [Vibrio cholerae HE-16]
Length = 362
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D +MR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDADMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B]
gi|166223600|sp|A1S8R2.1|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
amazonensis SB2B]
Length = 363
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 222/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ + ++ + +E++ L +V+ + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ TAKEML +D E++ A +EI AK + +E E++ L+LPKD ND+ N F+EIRAG
Sbjct: 61 DLETAKEMLEEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IAR G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E + INP++LRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L+AR++ ++ +++S A RR L+
Sbjct: 241 KTDSAIRITHLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRRSAEATTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|387131029|ref|YP_006293919.1| peptide chain release factor 1 [Methylophaga sp. JAM7]
gi|386272318|gb|AFJ03232.1| Peptide chain release factor 1 [Methylophaga sp. JAM7]
Length = 362
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 231/312 (74%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ LL EV + + +E++ L P+V + Y+++ +
Sbjct: 1 MKESIRHKLEALTERHEEISGLLADPEVMADQNKFRSLSQEYAQLEPVVTNFATYRQVIQ 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A ML+ D ++R A +EI A++R +EL+++KL+LPKD ND RNI++EIRAG
Sbjct: 61 DIEEAGAMLSEADADLREMAREEIAAAEERQEKLELDLQKLLLPKDPNDNRNIYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++ER W+ EI++++ E GG+KEII RI G YS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAERRRWQVEILNKAEGEHGGFKEIIVRIAGEGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE DEI++I INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEVDEIDEIAINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ +L +RI +++ +QQS A+ RRLL+
Sbjct: 241 TTDSAIRITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAAQVEKQQSEQAETRRLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|417325996|ref|ZP_12111812.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353574496|gb|EHC37517.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 276
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/268 (57%), Positives = 204/268 (76%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE++ L + + +++++ +DI TA+ ML+D EMR A +E+ AK++ +E +++ L
Sbjct: 3 REYAQLSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVL 62
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
+LPKD +D+RN F+E+RAGTGGDE+ALF DL RMY R++E W+ EI+S S E GGY
Sbjct: 63 LLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGY 122
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KEIIA+I G VY +LKFESG HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP
Sbjct: 123 KEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINP 182
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADLRIDT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI
Sbjct: 183 ADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 242
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPL 307
++ ++Q A RR L+GS + P+
Sbjct: 243 AAETAKRQQAEASTRRNLLGSGDRTGPI 270
>gi|385788210|ref|YP_005819319.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
Length = 360
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + + RE++ L + + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML D EMR A +E+ A+ +++ +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DMATAEMMLGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKE+IA++IG Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGS 300
>gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99]
gi|238689693|sp|B2VEH7.1|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99]
Length = 360
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 222/300 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQSQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR+ A +E+ A+ ++E +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DIETAEMMLSDAEMRDMAQEELQTARAASEELEQQLQVLLLPKDPDDERNCYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKE+IA+++G Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVVGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGS 300
>gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c]
gi|20139358|sp|Q9PA71.1|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c]
Length = 361
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 213/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +EL+ LL+ ++ ++ + RE + L PI +
Sbjct: 1 MKPTLRRKLEALVERHEELERLLSDPKIVSDTDRFRTYSRELAQLAPIATTLAEETRTKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ + D EMR A EI +A+ + ++ E+++L++P+D D+ N+F+E+RAGTG
Sbjct: 61 DLAAAETLRTDPEMRELAEQEIAIAQAHLTTLDEELQRLLIPQDPRDECNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F +L RMY R++ER WK E+ S + E GGYKEIIARI+G YS+LKFESG
Sbjct: 121 GDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEADEI DI+INPADL+IDT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+PTG+VV+ Q +RSQH N+ A+K L A++ +S+ +Q + A R+L +GS
Sbjct: 241 ESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERSQQATAEAMTRKLQVGS 300
>gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
gi|451964530|ref|ZP_21917794.1| peptide chain release factor 1 [Edwardsiella tarda NBRC 105688]
gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
gi|451316650|dbj|GAC63156.1| peptide chain release factor 1 [Edwardsiella tarda NBRC 105688]
Length = 360
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE+ L + + ++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYVQLTDVSRCFLDWRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +EI ++R+ ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQEEIKETRERLNELEQQLQILLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ LF DL RMY R++E W+ E++S S E GGYKE+IA++ G Y +LKFESG
Sbjct: 121 GDEAGLFAGDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKVSGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQREEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|444920366|ref|ZP_21240209.1| Peptide chain release factor 1 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508685|gb|ELV08854.1| Peptide chain release factor 1 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 362
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KL++ +R +E+ LL++ E+ + + + +E++ L P+VE + +K
Sbjct: 1 MNPSIIRKLDQLIERHQEVGVLLSEPEIITDQNKFRELSQEYAQLTPVVEEFTAWKTNEF 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ AKEML +D E++ A +E+ L +++ ++E ++ L+LPKD ND NIF+EIRAG
Sbjct: 61 NLTEAKEMLESSDAELKEMAKEELPLLQEKQAELEKTLQILLLPKDPNDDSNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL MY R++E W+ EI+S + E GG+KEIIAR+IG YS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFNMYARYAETLRWQVEIVSENRGEHGGFKEIIARVIGHGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TVA++PE E E +NINPADL++DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSAATVAILPEVPETEVVNINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG VV+CQ++RSQHKN+A A+ +L +R+ +++ ++Q ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGTVVECQDERSQHKNRARAMSLLASRLLEAEREKEQKAMSENRRSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|406915166|gb|EKD54274.1| hypothetical protein ACD_60C00100G0011 [uncultured bacterium]
Length = 360
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/305 (52%), Positives = 219/305 (71%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK + KL+ ++R +EL+ LL V N +DY K E++ L P+V+++ ++
Sbjct: 1 MKPSIEKKLQSLTERFEELNALLADPHVIQQQNRFRDYSK---EYAELRPVVDVFQRFQT 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+DI AKE+L D E++ A E+ A++ +E E++ L+LP+D +D NIF+EI
Sbjct: 58 CLQDIAGAKELLKEEDKELQELAKQELKNAEELQNSLEHELQILLLPRDPHDDSNIFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAG GGDE+A+F DL RMY R++E W+ E+ISR+ SE GGYKEII RIIG YS+
Sbjct: 118 RAGAGGDEAAIFAGDLSRMYTRYAETQGWQVELISRNASEQGGYKEIILRIIGQGAYSRF 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESGVHRVQRVP+TE QGRIHTS CT+AV+PE DE+E I+INP DLRIDT+RASGAGGQ
Sbjct: 178 KFESGVHRVQRVPETEAQGRIHTSTCTIAVMPEVDEVEAIDINPQDLRIDTFRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+ KTDSA+RITHIP+G VV+CQ++RSQHKN+A AL +L A++ + +QQ A+ RR
Sbjct: 238 HVQKTDSAIRITHIPSGTVVECQDERSQHKNRARALSLLKAKLLAEERNKQQQQQAETRR 297
Query: 296 LLIGS 300
L+G+
Sbjct: 298 HLVGT 302
>gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010]
gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010]
Length = 362
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE R +E+ LL + + + +E++ L P+V + Y+
Sbjct: 1 MKESIKNKLESLVDRHEEIAGLLADPDTMADQNKFRTLSQEYAQLEPVVSNFTAYRHTLS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A ML +D EMR A +E+N A++ ++EL ++KL+LPKD ND+RNIF+EIRAG
Sbjct: 61 AIEDANLMLEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++E WK E+I+ E GGYKE+I RI+G YS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE DEI+ ++INPAD+R+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A A+ +L +RI ++++Q++ A+ R+ L+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQEAEQAETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
Length = 361
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE S+R +E+ LL V + + + RE+S L +V+ + Y+ +
Sbjct: 1 MKPSLLLKLETLSERHEEVSALLGDPGVIADQDQFRQLSREYSELETVVKCFGEYQALLG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI A+ ML +D +MR A EI+ + R +E E++ L+LP+D D N+F+EIRAG
Sbjct: 61 DIEAAQSMLADDDADMREMAKAEISEGEARREALEAELQVLLLPRDPRDSHNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+ER W+ E++S E GGYKEII+RI G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLQRMYTRFAERQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++ E +E+E I IN ADLR+DTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+TH+PTGIVV+CQ++RSQHKN+A A+ +L A++ S Q S A+ RR L+
Sbjct: 241 KTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLTSSAEAAQASEQAEQRRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|389807572|ref|ZP_10204161.1| peptide chain release factor 1 [Rhodanobacter thiooxydans LCS2]
gi|388443896|gb|EIM00028.1| peptide chain release factor 1 [Rhodanobacter thiooxydans LCS2]
Length = 359
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 218/303 (71%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE ++R +E+ LL+Q EV + + + +E++ L P+ + + ++ +
Sbjct: 8 KLEALAERHEEIGLLLSQPEVLGDNTRFRELSQEYAQLEPVAASLREHDQAERELAETRA 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E+ A+D+++ ++R+ D++ ++ L+LPKD D+ N+++E+RAGTGGDE+A+F
Sbjct: 68 MLDDPELGEMAVDDVHRLEQRLLDLDDALQLLLLPKDPRDEANLYLEVRAGTGGDEAAIF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+R++E W EI+S E GGYKE++ARI G YS+LKFESG HRVQRV
Sbjct: 128 AGDLLRMYLRYAESRRWHVEILSEHTGEHGGYKEVVARIEGKGAYSRLKFESGTHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGRIHTSA TVA++PE DEI+D+ INPADL++DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRIHTSAATVAILPELDEIDDVEINPADLKVDTFRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTG VV+CQ +RSQHKN+A A+ +L AR+ D +Q + A+ RRL +GS + +
Sbjct: 248 HLPTGTVVECQEERSQHKNRARAMSLLKARLLDEAQSKQSAAQAQERRLQVGSGDRSQRI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|407791373|ref|ZP_11138458.1| peptide chain release factor 1 [Gallaecimonas xiamenensis 3-C-1]
gi|407200605|gb|EKE70611.1| peptide chain release factor 1 [Gallaecimonas xiamenensis 3-C-1]
Length = 363
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M +L+KLE +R +E+ LL+ V + K + +E L + + Y+
Sbjct: 1 MNPSILAKLESLQERFQEVQALLSDPAVIGDQKRFQALSKEFGQLEEVTGCFGRYQGAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EML +D EMR A +E+ AK +I + E++ L+LPKD ND+RNI++EIRAG
Sbjct: 61 DLEVAQEMLAGDDAEMRELAQEEVAGAKAQIETLAQELQILLLPKDPNDERNIYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R+ E W+ E++S + E GG+KE+IA + G VY + KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYCEARRWRVEVVSANEGEHGGFKEVIALVSGDGVYGRFKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE E E +NI+ ADLRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRIHTSACTVAILPEVPEAEAVNISTADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSAVRITH+PTG+VV+CQ +RSQHKNKA AL +L +RI+ + +++ + RR L+
Sbjct: 241 RTDSAVRITHLPTGVVVECQEERSQHKNKAKALSVLASRIQAMEDEKRRLSEEATRRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|407007092|gb|EKE22847.1| hypothetical protein ACD_6C00704G0002 [uncultured bacterium]
Length = 362
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ S R +EL LL EV ++ K + + REH+ L I ++ Y++ E
Sbjct: 1 MKESLRLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D + + A +EI K I +E ++ L++PKD ND + ++EIRAGTG
Sbjct: 61 DIETAQAMLSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E W+ EI+S + E GGYKE+I I G VY +LKFESG
Sbjct: 121 GDEAAIFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTSACTVA++PE D + IN +DLRIDTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPATESQGRVHTSACTVAILPEIDVDTSVEINSSDLRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ +RSQHKNKA A+ +L++R++++K + T++MRR L+GS
Sbjct: 241 DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
TAC125]
gi|119361581|sp|Q3IK95.1|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
haloplanktis TAC125]
Length = 361
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V + + +E+S L +V+ + +Y++ +
Sbjct: 1 MKESVYHKLEILVERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+I+A+EML +D ++R A +E AK +I IE EI+ L+LPKD D N+++E+RAG
Sbjct: 61 DVISAEEMLKDSDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK ++++ + E GGYKEIIA I G V+ +LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGR+HTSACTVAV+ E E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ+ RSQHKN+A A+ +L AR++ ++ ++ + A RR L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRDAAEASERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|416076160|ref|ZP_11585288.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344740|ref|ZP_21152939.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348005303|gb|EGY45790.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443543465|gb|ELT53688.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 360
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 223/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96]
gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96]
Length = 360
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + + RE++ L + + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML D EMR A +E+ A+ +++ +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DMATAEMMLGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKE+IA++IG Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGS 300
>gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
Length = 374
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKL+ ++R +EL LL V N+ + +E++ L +V + +KK+N+
Sbjct: 15 MKDSIISKLDSLAERHEELQALLGDASVINDQDKFRTYSKEYAQLEEVVGAFTRWKKLNQ 74
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ +LND +M++ A +EI K I +E +++ L+LPKD +D+ N ++EIRAGTG
Sbjct: 75 DIEDAQLLLNDPDMKDMAQEEIEQNKAEIEQLEQQLQILLLPKDPHDEYNAYLEIRAGTG 134
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E +S + SE GGYKEII ++IG VY +LKFESG
Sbjct: 135 GDEAGIFAGDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKVIGEGVYGQLKFESG 194
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP DLRIDTYR+SGAGGQH+N T
Sbjct: 195 GHRVQRVPKTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDTYRSSGAGGQHVNTT 254
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI ++ +Q A RR L+GS
Sbjct: 255 DSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQAREQADTRRNLLGS 314
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 315 GDRSDKIRTY 324
>gi|387871504|ref|YP_005802878.1| peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
12163]
gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
12163]
Length = 363
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + + RE++ L + + +++ E
Sbjct: 4 MKPSIVAKLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQE 63
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML D EMR A +E+ A+ +++ +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 64 DMATAEMMLGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTG 123
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKE+IA++IG Y +LKFESG
Sbjct: 124 GDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESG 183
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 184 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTT 243
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ +Q + RR L+GS
Sbjct: 244 DSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGS 303
>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
Length = 362
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD +D RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|383190243|ref|YP_005200371.1| peptide chain release factor 1 [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588501|gb|AEX52231.1| peptide chain release factor 1 [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 360
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/300 (52%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ +L + + + RE+S L + E + +++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQAMLGDASIIADQDKFRSLSREYSQLTSVSECFLAWRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A DEI K I ++E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQDEIKDCKTAIEELEQKLQLLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S S E GGYKE+IA+I G VY + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIVSASEGEHGGYKEVIAKISGDGVYGQFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAEEASTRRNLLGS 300
>gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365967407|ref|YP_004948969.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|415767191|ref|ZP_11483060.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|444347722|ref|ZP_21155548.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348658647|gb|EGY76213.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|365746320|gb|AEW77225.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443548282|gb|ELT57567.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 360
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 223/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont]
Length = 360
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 220/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + RE++ L + + ++++ E
Sbjct: 1 MKSSIVAKLEALQERHEEVEALLGDAGVIGDQDRFRALSREYAQLSDVTRCFREWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EMR+ A +E+ L++ + +E +++ L+LPKD +D+R FIE+RAGTG
Sbjct: 61 DVETAEMLLDDAEMRDMAQEELKLSRDKREVLEQQLQVLLLPKDPDDERPCFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IARI G Y ++KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARITGDGAYGRMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P+ E E +INP DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRQAAEASTRRNLLGS 300
>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
Length = 362
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 217/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE S+R +E+ LL V ++ + +E+S L +++ ++ YK+
Sbjct: 1 MKPSILAKLEALSERYEEVQHLLGDPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAES 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A +E+ AK+ I + E++ L+LPKD ND+RN F+EIRAG
Sbjct: 61 DLEAAQEMANEDDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+E W+ E+I+ + E GGYKE+IA++ G Y +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E INPADL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L AR+ ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|416103591|ref|ZP_11589494.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345999|ref|ZP_21153996.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|348007868|gb|EGY48155.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|443542172|gb|ELT52535.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 360
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 223/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAELLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|344198755|ref|YP_004783081.1| peptide chain release factor 1 [Acidithiobacillus ferrivorans SS3]
gi|343774199|gb|AEM46755.1| Peptide chain release factor 1 [Acidithiobacillus ferrivorans SS3]
Length = 365
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 211/307 (68%), Gaps = 3/307 (0%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
+LE+ + R EL LL + V ++ + + +E + P+++L +++ D A+
Sbjct: 9 GQLEQLAFRFDELSQLLARPNVASDAQRFQSLSKELGEIGPVLDLLRRHEQRQRDRDDAE 68
Query: 67 EML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
ML D E+R A +E+ A+ + IE ++ +LPKD ND RN+F+E+RAGTGG+E
Sbjct: 69 RMLMDERDAELRAMASEEVAAAQAELDQIEDSLRVRLLPKDPNDDRNVFVEVRAGTGGEE 128
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF L RMY R++E + I+S S SE GGYKEI+ I G YS+LKFESG HR
Sbjct: 129 AALFAGVLARMYTRYAESKGFAVLILSASDSERGGYKEIVLEISGRGAYSRLKFESGGHR 188
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE QGRIHTSACTVAV+PE D + +I INPADLRIDTYRASGAGGQHINKTDSA
Sbjct: 189 VQRVPETEAQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRASGAGGQHINKTDSA 248
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
+RITHIP+G+VV CQ DRSQHKN+A A+ +L AR+ + + +QQS A+ RRLL+GS +
Sbjct: 249 IRITHIPSGLVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAAAQTRRLLVGSGDR 308
Query: 304 KSPLNIF 310
+ +
Sbjct: 309 SERIRTY 315
>gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii]
Length = 361
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL+ + R E+ LL+ V N+ Y + +E++ L PIV+ + +++ +
Sbjct: 1 MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +A+EM D E+R A +E+ + ++E ++ L++PKD ND+RN+F+EIRAG
Sbjct: 61 AIESAEEMQQEKDPELRKLAEEELEQLTLKKEELEDQLNLLLVPKDPNDERNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+A+F DL RMY R++E W+ I+S E GG+KE+IAR+IG VYS+LKFE
Sbjct: 121 TGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DEI+ I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L +++ ++ +Q A R+ L+
Sbjct: 241 RTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|374335072|ref|YP_005091759.1| peptide chain release factor 1 [Oceanimonas sp. GK1]
gi|372984759|gb|AEY01009.1| peptide chain release factor 1 [Oceanimonas sp. GK1]
Length = 361
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M +L KLE +R +E+ LL + V N+ + Y RE++ L +V + Y++
Sbjct: 1 MNESVLKKLEGLEERYQEVQALLGEASVINHQEQYRALTREYAQLEDVVACFQRYRQAEA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EML +D EM+ A DEI A+ I + E++ L+LP+D D N F+EIRAG
Sbjct: 61 DLAEAREMLAEDDAEMKAMARDEIEAAEAAIETLSQELQILLLPRDPRDDNNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ EI+S S E GG+KEIIARI G Y +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETRRWRVEIVSASEGEHGGFKEIIARIEGAGAYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAEAPEINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L +R+ ++ ++ + RR L+
Sbjct: 241 KTDSAIRITHLPTGMVVECQDERSQHKNRAKAMAVLASRLAQAEQDKRHAEEQSTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|365849784|ref|ZP_09390252.1| peptide chain release factor 1 [Yokenella regensburgei ATCC 43003]
gi|364568109|gb|EHM45754.1| peptide chain release factor 1 [Yokenella regensburgei ATCC 43003]
Length = 360
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + ++++I +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWRQIQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEALEQQLQVLLLPKDPDDERNAYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVELMSASEGEHGGYKEVIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INP++LRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPSELRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAEASERRNLLGS 300
>gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
gi|238689096|sp|B1XYX1.1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
Length = 360
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + +L + + RL E+D L +V + I REH+ + +V+ + Y++ +
Sbjct: 1 MTPFLRQQLSRQALRLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+E+L++ EM A EI A+ + ++ E+ ++P+D +D RN F+EIRAGTG
Sbjct: 61 DLAGAQELLDEPEMAELARAEIGAAQADLDRLDSELLTALMPRDADDDRNAFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DL RMY+R +ER WK E++S S+S++GGYK+++ IIG V+ LK+ESG
Sbjct: 121 GEESALFAADLARMYLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+ EADE E++++NPA+LRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+V +CQ+DRSQH+NKA AL +L AR++D +EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGLVAECQDDRSQHRNKARALAVLAARLRDRVRQEQAAKDAAARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40]
gi|119361599|sp|Q21FM3.1|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus
degradans 2-40]
Length = 360
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE ++R E+ L+ +V +N + RE++ L P+++ YN Y +
Sbjct: 1 MKASILEKLEHLAERFTEVGALMGDPDVISNQDKFRDLGREYAELEPVIKCYNEYNTVLG 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+I AK +++D + MR DE+ + + +ELE++KL+LPKD ND +N+F+EIRAG
Sbjct: 61 NIAEAKVLISDSDPDMRAMGQDELKENEAALEPLELELQKLLLPKDPNDGKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK EIIS + E GGYKEII R++G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRVVGQGVYSELKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PEADE+ ++NIN ADLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L +R+ ++ + + A R+ L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLSMAQEEKAAAEQASARKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|444380487|ref|ZP_21179617.1| Peptide chain release factor 1 [Enterovibrio sp. AK16]
gi|443675443|gb|ELT82175.1| Peptide chain release factor 1 [Enterovibrio sp. AK16]
Length = 362
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE S+R +E+ LL V ++ + +E+S L + + +YK+ E
Sbjct: 1 MKSSIIAKLEALSERYEEVQHLLGDPGVISDQDRFRSLSKEYSQLEEVTMCFTSYKQAEE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A +E+ AK I + E++ L+LPKD ND+RN F+EIRAG
Sbjct: 61 DLEAAQEMANEDDPEMREMAQEEVKAAKAEIERLSDELQVLLLPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL R Y RF+E+ W+ E+++ + E GGYKE+IA++ G Y +KFE
Sbjct: 121 AGGDEAAIFAGDLFRSYSRFAEKKGWRVEVVNANHGEHGGYKEMIAKVSGEGAYGVMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E INPADL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L AR+ ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|389799534|ref|ZP_10202514.1| peptide chain release factor 1 [Rhodanobacter sp. 116-2]
gi|388442214|gb|EIL98424.1| peptide chain release factor 1 [Rhodanobacter sp. 116-2]
Length = 359
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 218/303 (71%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE ++R +E+ LL+Q +V + + +E++ L P+ + + ++ +
Sbjct: 8 KLEALAERHEEIGLLLSQPDVLADNTRFRTLSQEYAQLEPVAASLREHDQAERELAETRA 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E+R A+D+++ ++R+ D++ ++ L+LPKD D+ N+++E+RAGTGGDE+A+F
Sbjct: 68 MLDDPELREMAVDDVHRLEQRLLDLDDALQLLLLPKDPRDEANLYLEVRAGTGGDEAAIF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+R++E W EI+S E GGYKE++ARI G YS+LKFESG HRVQRV
Sbjct: 128 AGDLLRMYLRYAESRRWHVEILSEHAGEHGGYKEVVARIEGKGAYSRLKFESGTHRVQRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+QGRIHTSA TVA++PE DEI++I INPADL++DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 188 PETESQGRIHTSAATVAILPELDEIDEIEINPADLKVDTFRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTG VV+CQ +RSQHKN+A A+ +L AR+ D +Q + A+ RRL +GS + +
Sbjct: 248 HLPTGTVVECQEERSQHKNRARAMSLLKARLLDEAQSKQSAAQAQERRLQVGSGDRSQRI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336]
gi|189039976|sp|B0UUE6.1|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336]
Length = 360
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL+ LL + V N+ + +E++ L +V+ + + +N
Sbjct: 1 MKASIISKLESLKERHEELEALLGESSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I + +L+D +M+ A EI +K I + E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E+++ + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI ++ Q A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|381404795|ref|ZP_09929479.1| peptide chain release factor 1 [Pantoea sp. Sc1]
gi|380737994|gb|EIB99057.1| peptide chain release factor 1 [Pantoea sp. Sc1]
Length = 360
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + +++++ E
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA++ML+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DIETAQQMLDDPEMRDMAQEELQAAREKGETLEQQLQVLLLPKDPDDERACFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IAR+ G Y ++KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEGRRWRVEIVSANDGEHGGYKEVIARVTGEGAYGRMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ + + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMARRHAAEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|378579405|ref|ZP_09828072.1| peptide chain release factor RF-1 [Pantoea stewartii subsp.
stewartii DC283]
gi|377817879|gb|EHU00968.1| peptide chain release factor RF-1 [Pantoea stewartii subsp.
stewartii DC283]
Length = 360
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 224/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + ++++ +
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQNQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TAK +L+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DIETAKMLLDDPEMRDMAQEELQAAREKTDALEQQLQLLLLPKDPDDERDCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IARI+G Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEIVSANDGEHGGYKEVIARIMGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEAEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|387121893|ref|YP_006287776.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415763957|ref|ZP_11482264.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416040612|ref|ZP_11574456.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416043980|ref|ZP_11574838.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|429733897|ref|ZP_19267949.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993566|gb|EGY34917.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996676|gb|EGY37735.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348654424|gb|EGY70048.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385876385|gb|AFI87944.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429154077|gb|EKX96831.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans Y4]
Length = 360
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 222/313 (70%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|333893681|ref|YP_004467556.1| peptide chain release factor 1 [Alteromonas sp. SN2]
gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
Length = 361
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL +V N + +E S L +V +N Y++ E
Sbjct: 1 MKDSVVRKLENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +A EML +D EMR A +E+ +AK I +E E++ L+LPKD ND N F+E+RAG
Sbjct: 61 NLDSANEMLKEDDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+I+ + E GGYKE++A I G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE E E I+INPADLRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+G+VV+CQ++RSQHKN+A A+ +L AR+ + + ++ + A R+ L+
Sbjct: 241 KTDSAIRITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii
HA]
gi|166223616|sp|A5CW65.1|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius
okutanii HA]
Length = 361
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 228/302 (75%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M +L+KLE+ S RL+E+ +L+ EV +N+K + K E++ L P+ + + Y +
Sbjct: 1 MNSSILAKLEQLSIRLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ +L +D+E++ A +EI KK + ++L++KK ILPKD ND RNI IEIRAG
Sbjct: 61 NLEDAQLILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL ++Y R+SE+ W EIIS S+ E GG+KEIIARI G+NVYSKLKFE
Sbjct: 121 TGGDEASIFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE + IE+ININ D+RIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVRITH+PTG VV+CQ+ RSQHKNKA A+ +L +RI D++ +EQQ + R+ LI
Sbjct: 241 KTDSAVRITHLPTGTVVECQDGRSQHKNKAQAMSVLASRILDAQQQEQQEQQSSTRKELI 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|416092858|ref|ZP_11588418.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348008813|gb|EGY49040.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 377
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 223/313 (71%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 18 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 77
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 78 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 137
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 138 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 197
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 198 GHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKT 257
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 258 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 314
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 315 LGSGDRSDKIRTY 327
>gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
gi|386745312|ref|YP_006218491.1| peptide chain release factor 1 [Providencia stuartii MRSN 2154]
gi|188021179|gb|EDU59219.1| peptide chain release factor 1 [Providencia stuartii ATCC 25827]
gi|384482005|gb|AFH95800.1| peptide chain release factor 1 [Providencia stuartii MRSN 2154]
Length = 360
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + +E++ L + + + ++ + E
Sbjct: 1 MKPSIVAKLEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFTAWRTVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EM+ A +E+ AK R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAEMMLDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E N W+ E++S S E GG+KE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKISGESVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAILPELPEAELPEINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
Length = 358
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE R +E+ LL+ +V N+ + +E++ L P+ + ++ Y+ ++
Sbjct: 1 MKDSIRQKLENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQSD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ TA+EML+D +M+ A +EI+ A+ I +E E++ L+LP D +D NI++EIRAGTG
Sbjct: 61 NLSTAEEMLDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DLLRMY R++E W+ E+ + S E GGYKE+IARIIG +SK+KFESG
Sbjct: 121 GDEAAIFAGDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSA TVA++PE DE+E +INPADLRIDT+RASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+ Q +RSQHKN+A A+ L ++I + +Q A R+ L+GS
Sbjct: 241 DSAIRITHVPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT]
gi|119361547|sp|Q0I3B5.1|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus
somnus 129PT]
Length = 360
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE +R +EL+ LL + V N+ + +E++ L +V+ + + +N
Sbjct: 1 MKASIISKLESLKERHEELEALLGEPSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I + +L+D +M+ A EI +K I + E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E+++ + SE GGYKEII ++ G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI ++ Q A RR L+GS
Sbjct: 241 DSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|431932397|ref|YP_007245443.1| peptide chain release factor 1 [Thioflavicoccus mobilis 8321]
gi|431830700|gb|AGA91813.1| peptide chain release factor 1 [Thioflavicoccus mobilis 8321]
Length = 359
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + SKLE+ ++R E+ LL E HN+ + +E++ + P+ ++ Y++I
Sbjct: 1 MNPSLRSKLERLAERYTEVTALLADPEAHNDQGRFRALSQEYAQIEPVATCFDRYQEIEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+E+L D EM A +E+ A +R +E +++L++P D ND RN+F+E+RAGTG
Sbjct: 61 EVAGAEELLADPEMAALAREELAAAIERREALEPVLQRLLIPADPNDDRNVFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DLLRMY+R++E W E++S S E GGYKE++ RI G VYS+LKFE G
Sbjct: 121 GAEAALFAGDLLRMYLRYAEARGWSSELVSESPGEQGGYKEVVTRINGRGVYSRLKFEPG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGR+HTSACTVAV+PEA+ I+++ I+ +LRIDTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESQGRVHTSACTVAVLPEAELIDEVEIDSNELRIDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L A++ Q ++ RRL +GS
Sbjct: 241 DSAIRITHLPSGIVVECQDERSQHKNRAKAMSLLQAKLLSEARSAQVDAQSQSRRLQVGS 300
>gi|406966646|gb|EKD91998.1| hypothetical protein ACD_29C00256G0002 [uncultured bacterium]
Length = 362
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 206/302 (68%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K + KL S R +EL +L+ E+ +N Y +E++ L PI Y +
Sbjct: 2 LKESLKQKLLSLSHRYQELGAMLSDPEIIHNQNKYRDLSKEYAQLAPITNCMKQYLTNEK 61
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ A EM D EMR A EI L +E +K L+LPKD ND RN+F+EIRAG
Sbjct: 62 EYHAALEMRAEKDSEMREMAETEIKLLILEQEKLEETLKILLLPKDPNDDRNVFLEIRAG 121
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG E+A+FV DL RMY RF+E W + ++S + + GGYKEII RI G VYS+LKFE
Sbjct: 122 TGGHEAAIFVGDLFRMYSRFAENQGWIYSVVSANTGDQGGYKEIIVRIEGQGVYSQLKFE 181
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGR+HTSACTVAV+PE D IE+I INPA+LR+DTYRASGAGGQH+N
Sbjct: 182 SGAHRVQRVPTTEAQGRVHTSACTVAVLPELDSIEEITINPAELRVDTYRASGAGGQHVN 241
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+G+VV+CQ++RSQHKN+A A+ +L +R+ + +Q S A R+ LI
Sbjct: 242 KTDSAIRITHIPSGLVVECQDERSQHKNRARAMSLLQSRLLNQAQTKQASEQAAQRKSLI 301
Query: 299 GS 300
GS
Sbjct: 302 GS 303
>gi|372273961|ref|ZP_09509997.1| peptide chain release factor 1 [Pantoea sp. SL1_M5]
gi|390433703|ref|ZP_10222241.1| peptide chain release factor 1 [Pantoea agglomerans IG1]
Length = 360
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + +++++ E
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA++ML+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R FIE+RAGTG
Sbjct: 61 DIETAQQMLDDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IAR+ G Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGEGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI +++ + + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRNLLGS 300
>gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212]
gi|238058711|sp|B6J390.1|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii
CbuG_Q212]
Length = 361
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL+ + R E+ LL+ V N+ Y + +E++ L PIV+ + +++ +
Sbjct: 1 MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +A+EM D E+R A +E+ + ++E ++K L++PKD ND+ N+F+EIRAG
Sbjct: 61 AIESAEEMQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDELNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+A+F DL RMY R++E W+ I+S E GG+KE+IAR+IG VYS+LKFE
Sbjct: 121 TGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DEI+ I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L +++ ++ +Q A R+ L+
Sbjct: 241 RTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|253990004|ref|YP_003041360.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
Length = 360
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L +V + + + RE++ L + + ++ + +
Sbjct: 1 MKPSIVAKLEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTTCFKTWRTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML+D EMR A +EI AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DLKAAEMMLDDPEMREMAQEEIKDAKARNEELEQQLQLLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E++S + E GGYKEIIA++ G VY LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKVSGEQVYGHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E I+P+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++R++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGS 300
>gi|357418253|ref|YP_004931273.1| peptide chain release factor 1 [Pseudoxanthomonas spadix BD-a59]
gi|355335831|gb|AER57232.1| peptide chain release factor 1 [Pseudoxanthomonas spadix BD-a59]
Length = 360
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 212/310 (68%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL V + + + RE S L P+ +
Sbjct: 1 MTPTLRRKLEALAERREELQRLLADPSVVADNTRFRELSREFSQLEPVANAMAEEGRARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M D E+R A +E+ A+ R+ +++ + L++P+D+ D+ N+F+E+RAGTG
Sbjct: 61 DLAAAQAMREDPELRELAEEEVTAAQARLAELDQALSLLLIPRDRRDEGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++ER WK E+ S S E GGYKE++AR++G YSKLKFESG
Sbjct: 121 GDEAALFAGDLFRMYARYAERQGWKVEVESDSPGEHGGYKEVVARVVGRGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPE DE+E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPETDEVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG VV+CQ +RSQH N+ A+K L A++ D++ Q + A+ R+L +GS
Sbjct: 241 DSAIRITHLPTGTVVECQTERSQHANRDKAMKRLKAQLLDAERSRQAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 362
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL +V + + +E+S L + + + Y++ E
Sbjct: 1 MKQSILVKLETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++ER W+ E+IS + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|406946704|gb|EKD77826.1| hypothetical protein ACD_42C00168G0008 [uncultured bacterium]
Length = 363
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/302 (53%), Positives = 212/302 (70%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK KL S R +E+ +L+ V N + RE++ L PIV +++Y++
Sbjct: 4 MKESFKLKLITLSNRYREISAMLSDAAVINQQNKFRDLSREYAQLEPIVNCFSHYQQNEM 63
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +A +MLN D E++ A +E+N K + E++ L+LPKD ND+RN+F+EIRAG
Sbjct: 64 GIASALQMLNENDSELQYLAQEELNTLKSTQEKLIEELQLLLLPKDPNDERNVFLEIRAG 123
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG E+ALF DL RMY RF+E W + ++S E GG+KEII RI G VYS+LKFE
Sbjct: 124 TGGHEAALFAGDLFRMYSRFAENQGWCYTVVSAHDGEQGGFKEIIIRIEGHGVYSQLKFE 183
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACT+AV+PE D I++I INPA+LR+DTYRASGAGGQH+N
Sbjct: 184 SGAHRVQRVPATEAQGRIHTSACTIAVLPEQDSIDEIKINPAELRVDTYRASGAGGQHVN 243
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ D +Q S A R+ LI
Sbjct: 244 KTDSAIRITHLPTGLVVECQDERSQHKNRARAMSLLSARLLDQAQSKQASEQAAHRKSLI 303
Query: 299 GS 300
GS
Sbjct: 304 GS 305
>gi|417821512|ref|ZP_12468126.1| peptide chain release factor 1 [Vibrio cholerae HE39]
gi|422911020|ref|ZP_16945648.1| peptide chain release factor 1 [Vibrio cholerae HE-09]
gi|423956678|ref|ZP_17735232.1| peptide chain release factor 1 [Vibrio cholerae HE-40]
gi|423985466|ref|ZP_17738783.1| peptide chain release factor 1 [Vibrio cholerae HE-46]
gi|340039143|gb|EGR00118.1| peptide chain release factor 1 [Vibrio cholerae HE39]
gi|341632662|gb|EGS57522.1| peptide chain release factor 1 [Vibrio cholerae HE-09]
gi|408657222|gb|EKL28309.1| peptide chain release factor 1 [Vibrio cholerae HE-40]
gi|408663808|gb|EKL34658.1| peptide chain release factor 1 [Vibrio cholerae HE-46]
Length = 362
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+++ A+EM +D +MR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 NLVAAEEMAQEDDADMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|416068899|ref|ZP_11582975.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348000526|gb|EGY41306.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 360
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 222/313 (70%), Gaps = 6/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ + +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEVQLLLDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRLL 297
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR L
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRNL 297
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 298 LGSGDRSDKIRTY 310
>gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB]
gi|440758586|ref|ZP_20937746.1| Peptide chain release factor 1 [Pantoea agglomerans 299R]
gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB]
gi|436427692|gb|ELP25369.1| Peptide chain release factor 1 [Pantoea agglomerans 299R]
Length = 360
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + +++++ E
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA++ML+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R FIE+RAGTG
Sbjct: 61 DIETAQQMLDDPEMRDMAQEELQEAREKNDVLEQQLQVLLLPKDPDDERACFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IAR+ G Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI +++ + + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRNLLGS 300
>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
Length = 360
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++SKLE+ R +E+ +L +V ++ + +E S L +V ++ Y++
Sbjct: 1 MKASLVSKLEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQS 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EML +D EM++ A DE++ + + +E +++ L+LP+D D +N+++EIRAG
Sbjct: 61 DLSEAREMLKDSDPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R+SE W+ E+IS E GG+KEII+RI G ++Y+ LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE D +EDI IN ADLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+P+GIVV+CQ++RSQHKN+A A+ +L A++ + ++ + A+ RR L+
Sbjct: 241 TTDSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQAAAEQAEERRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346723855|ref|YP_004850524.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|119361637|sp|Q3BX07.1|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346648602|gb|AEO41226.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 361
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V N + RE S L P+ +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAMALEEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ + ND EMR A +EI A+ R+ ++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLATAEALRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|417518010|ref|ZP_12180464.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353650241|gb|EHC92659.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 317
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/312 (51%), Positives = 219/312 (70%), Gaps = 12/312 (3%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 ------------GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIG 168
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G
Sbjct: 121 RSLRFAPAPGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISG 180
Query: 169 LNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYR 228
VY +LKFESG HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R
Sbjct: 181 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFR 240
Query: 229 ASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQS 288
+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q
Sbjct: 241 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ 300
Query: 289 NTAKMRRLLIGS 300
A RR L+GS
Sbjct: 301 AEASTRRNLLGS 312
>gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
perforans 91-118]
gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
perforans 91-118]
Length = 361
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V N + RE S L P+ +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ + ND EMR A +EI A+ R+ ++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLATAEALRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|441506396|ref|ZP_20988368.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
gi|441425938|gb|ELR63428.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
Length = 363
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 216/313 (69%), Gaps = 3/313 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL+ +V + + RE+S L + + + Y++ E
Sbjct: 1 MKPSILVKLETLVERYEEVQHLLSDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAKE 60
Query: 61 DIITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D+ TA+EM+ +D +MR A +E+ AK I + E++ L++PKD ND+RN FIEIRA
Sbjct: 61 DLATAEEMMAMEDDPDMREMAQEEVKEAKSEIERLADELQVLLIPKDPNDERNCFIEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
G GGDE+ +F DL RMY +++E W+ E++S + +E GGYKE+IA++ G VY LKF
Sbjct: 121 GAGGDEAGIFAGDLFRMYSKYAESRGWRVEVMSANDAEHGGYKEMIAKVNGEGVYGTLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESG HRVQRVP TE+QGR+HTSACTVA++PE E E IN DL+IDT+RASGAGGQH+
Sbjct: 181 ESGGHRVQRVPATESQGRVHTSACTVAILPEIPEAEIPEINTGDLKIDTFRASGAGGQHV 240
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
N TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L
Sbjct: 241 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNL 300
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 301 LGSGDRSDRIRTY 313
>gi|386822516|ref|ZP_10109723.1| peptide chain release factor 1 [Serratia plymuthica PRI-2C]
gi|386380590|gb|EIJ21320.1| peptide chain release factor 1 [Serratia plymuthica PRI-2C]
Length = 361
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE+S L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R IF+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEEMKQAKAATEELEQQLQLLLLPKDPDDERGIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQEEASTRRNLLGS 300
>gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
Length = 361
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE+S L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R IF+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQEEASTRRNLLGS 300
>gi|421783069|ref|ZP_16219521.1| peptide chain release factor 1 [Serratia plymuthica A30]
gi|407754775|gb|EKF64906.1| peptide chain release factor 1 [Serratia plymuthica A30]
Length = 361
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE+S L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R IF+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEEMKQAKAAAEELEQQLQVLLLPKDPDDERGIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQEEASTRRNLLGS 300
>gi|386021934|ref|YP_005939959.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
Length = 360
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A AL L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|308186585|ref|YP_003930716.1| peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
Length = 360
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + + RE++ L + + +++++ E
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA++ML+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R FIE+RAGTG
Sbjct: 61 DIETAQQMLDDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IAR+ G Y ++KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARVTGDGAYGRMKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L +RI +++ + + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRNLLGS 300
>gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145]
gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145]
Length = 362
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/308 (48%), Positives = 218/308 (70%), Gaps = 8/308 (2%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE +R +E+ LL + ++ + + +E++ L +V +N+Y++ D+ A E
Sbjct: 8 KLEGLIERYEEVQALLGEPDIISEQDKFRSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHE 67
Query: 68 MLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
M +D EMR A +EI AK+R+ +E ++ L+LPKD ND R ++EIRAG GGDE+A
Sbjct: 68 MADDDDPEMREMANEEIADAKQRVESLENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAA 127
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
+F DL RMY R++E++ W+ +S + E GGYKE+IA++ G VY ++KFESG HRVQ
Sbjct: 128 IFAGDLFRMYSRYAEQHGWRVSTVSANEGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQ 187
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP+TE+QGRIHTSACTVAV+PE E E I INPADLR+DT+RASGAGGQH+N+TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTFRASGAGGQHVNRTDSAIR 247
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKIL---LARIKDSKLREQQSNTAKMRRLLIGSVQ 302
ITH+P+G+VV+CQ +RSQHKN+A A+ +L L R++D K +++++T RR L+GS
Sbjct: 248 ITHLPSGVVVECQEERSQHKNRAKAMSVLQSRLQRMEDEKRAQEEAST---RRSLVGSGD 304
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 305 RSERIRTY 312
>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
27405]
gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
gi|385777561|ref|YP_005686726.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
gi|419722892|ref|ZP_14250029.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
gi|419726392|ref|ZP_14253415.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
gi|166223552|sp|A3DIL4.1|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|125715301|gb|ABN53793.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
27405]
gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
gi|380770444|gb|EIC04341.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
gi|380781272|gb|EIC10933.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
Length = 360
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K + R E++ L+ V N +Y K ++EH+ L +V YN YKK+ ++I
Sbjct: 1 MFEKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIAD 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
AKEMLN D E R E+ A++++ ++ E+K L+LPKD ND+RN+ +EIR G GG
Sbjct: 61 AKEMLNEKLDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ALF DL RMY R++ERN WK EI+ + +EIGG+KE++ I G YS+LKFESGV
Sbjct: 121 DEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE GR+HTS TVAV+PEA+EI D+ INP DLRIDTYRASGAGGQHINKTD
Sbjct: 181 HRVQRVPVTEANGRVHTSTVTVAVLPEAEEI-DVEINPNDLRIDTYRASGAGGQHINKTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITH+PTG+VV CQ+ RSQHKNK A+K+L +++ + +Q + A+ R+ +G+
Sbjct: 240 SAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNEIAQERKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|407699633|ref|YP_006824420.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Black
Sea 11']
gi|407248780|gb|AFT77965.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Black
Sea 11']
Length = 361
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E S L +V +N Y++ E
Sbjct: 1 MKESVVRKLEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +A+EMLN D EMR A +E+ AK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 NLASAQEMLNEDDAEMREMAQEEMKEAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+++ + E GGYKE+IA + G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E + I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ + ++ + A R+ L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|339495308|ref|YP_004715601.1| peptide chain release factor 1 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338802680|gb|AEJ06512.1| peptide chain release factor 1 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 360
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 224/312 (71%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ R +EL LL EV ++ + RE++ + P++ Y K+ +
Sbjct: 1 MKASLLNKLDILQDRFEELTALLGDAEVISDQNRFRAYSREYADVEPVIVAYRQLCKVQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ +L +D +MR A +E+ AK ++ +E +++++LPKD ND RN+F+EIRAG
Sbjct: 61 DLEGAQALLKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ W+ EI+S S E GGYKE+I+R+ G NVY+KLKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE DE + INPADLRIDTYR+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTGIVV+CQ +RSQHKN+A AL L A+++D + ++ R+LL+
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALAWLAAKLQDRQDAAAHKEISETRKLLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
Length = 361
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE S+R +E+ LL V ++ + + RE S L +V+ + Y+++
Sbjct: 1 MKPSLLLKLETLSERHEEVSALLGDPGVISDQDQFRRLSREFSELETVVKCFGEYQELQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML +D +MR A EI+ + R +E E++ L+LP+D D N+F+EIRAG
Sbjct: 61 DLEAAESMLADDDADMREMAKTEISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY RF+ER W+ E++S E GGYKEII+RI G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLQRMYSRFAERQGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++ E +E+E + IN ADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+TH+PTGIVV+CQ++RSQHKN+A A+ +L A++ Q S A+ RR L+
Sbjct: 241 KTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLDSVAEESQASEQAEQRRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
19061]
gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
19061]
Length = 360
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L EV + + + +E++ L + + +K + +
Sbjct: 1 MKPSIVAKLEALQERHEEVLAHLGDAEVIADQERFRALSKEYAQLTDVTNCFKAWKSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQAELKDAKIRNEELEQQLQVLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKVSGEQVYGHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E INP DL+IDTYR+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDTYRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++R++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKRQEAEASERRNLLGS 300
>gi|406596337|ref|YP_006747467.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
gi|407683285|ref|YP_006798459.1| peptide chain release factor 1 [Alteromonas macleodii str. 'English
Channel 673']
gi|407687226|ref|YP_006802399.1| peptide chain release factor 1 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|406373658|gb|AFS36913.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
gi|407244896|gb|AFT74082.1| peptide chain release factor 1 [Alteromonas macleodii str. 'English
Channel 673']
gi|407290606|gb|AFT94918.1| peptide chain release factor 1 [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 361
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E S L +V +N Y++ E
Sbjct: 1 MKESVVRKLEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +A+EMLN D EMR A +E+ AK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 NLASAQEMLNEDDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+++ + E GGYKE+IA + G VY LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E + I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ + ++ + A R+ L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae]
Length = 349
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 149/299 (49%), Positives = 218/299 (72%)
Query: 12 FSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLND 71
+R +E+ L EV + + + +E++ L + + + +++ + +DI TA+ +L+D
Sbjct: 1 MQERYEEIQAHLVDAEVIADQERFRALSKEYAQLTDVTKCFQSWRAVQQDIETAETLLHD 60
Query: 72 LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDL 131
EMR A +E+ AKKR + E +++ L+LPKD +D++N F+EIRAGTGGDE+A+F DL
Sbjct: 61 PEMREMAQEELKEAKKRNEEFEQQLQILLLPKDPDDEKNCFLEIRAGTGGDEAAIFAGDL 120
Query: 132 LRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTE 191
RMY R++E W+ E+++ S E GGYKEIIA++ G +VY +LKFESG HRVQRVP+TE
Sbjct: 121 FRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKVSGDSVYGRLKFESGGHRVQRVPETE 180
Query: 192 TQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251
+QGRIHTSACTVA++ E E +INP+DLRIDT+R+SGAGGQH+N TDSA+RITHIPT
Sbjct: 181 SQGRIHTSACTVAILAEIPATELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITHIPT 240
Query: 252 GIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
GIVV+CQ++RSQHKNKA AL +L ARI+ +++++++ A RR L+GS + + +
Sbjct: 241 GIVVECQDERSQHKNKAKALSVLAARIRAAEVQKRREAEASERRNLLGSGDRSDRIRTY 299
>gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999]
Length = 361
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL +V + + +E++ L +V+ + +Y+ E
Sbjct: 1 MKPSVVQKLETLVERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A EM+ +D EMR A +EI AK I +E ++ L+LP+D D N F+EIRAG
Sbjct: 61 DLASANEMMQEDDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ +++S + E GGYKE+IA IIG Y +KFE
Sbjct: 121 AGGDEAAIFAGDLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+ E E E I+INPADLR+DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+G+VV+CQ++RSQHKN+A A+ +L +R+ + + ++ + A R+ L+
Sbjct: 241 KTDSAIRITHIPSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRDAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A]
gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A]
Length = 321
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/256 (58%), Positives = 198/256 (77%)
Query: 45 LYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKD 104
L + + +++++ EDI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD
Sbjct: 6 LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKD 65
Query: 105 KNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIA 164
+D+RN F+E+RAGTGGDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA
Sbjct: 66 PDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIA 125
Query: 165 RIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRI 224
+I G VY +LKFESG HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRI
Sbjct: 126 KISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRI 185
Query: 225 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLR 284
DT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++
Sbjct: 186 DTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMA 245
Query: 285 EQQSNTAKMRRLLIGS 300
++Q A RR L+GS
Sbjct: 246 KRQQAEASTRRNLLGS 261
>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
Length = 362
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKQSILVKLETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK I + E++ L++PKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++ER W+ EII+ + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|75434334|sp|Q5GWQ9.1|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361638|sp|Q2NZW2.1|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238689539|sp|B2SQN5.1|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 361
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V NN + RE S L P+ + +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M D EMR A +EI A+ R+ +++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTEHSKAAAAQAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
Length = 360
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 219/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + +E++ L + + ++K + E
Sbjct: 1 MKPSIVAKLEALQERHEEILVHLGDASVIADQDRFRALSKEYAQLTDVTHCFKSWKTVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+DLEMR A +E+ AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DLQTAEMMLDDLEMREMAQEELKDAKIRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IA++ G VY LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKVSGDQVYGHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +I+P DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKRQEAEASERRNLLGS 300
>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 357
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 215/307 (70%), Gaps = 3/307 (0%)
Query: 6 LSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITA 65
L KLE+ ++++ + E+ NN+++ R HS LYP+V+ + Y+K+ + A
Sbjct: 4 LKKLEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSLEEA 63
Query: 66 KEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
+E+L +D EMR A +E+ + +E ++K L+LP+D ND +N+ IEIRAG GGDE
Sbjct: 64 QELLEQDDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGAGGDE 123
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY R++ER W++EI+ + + IGGYKE++ + G YSKLKFESGVHR
Sbjct: 124 AALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHR 183
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQR+P TE GRIHTS TVAV+PEA+++ D+ I P DL+IDTYRASGAGGQ++N TDSA
Sbjct: 184 VQRIPVTEASGRIHTSTATVAVLPEAEDV-DVQIRPEDLKIDTYRASGAGGQYVNMTDSA 242
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIPTG+VV CQ++RSQ KN+A A+++L AR+ D +L++QQ+ A R+ +G+ +
Sbjct: 243 VRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQAQMAAERKGQVGTGDR 302
Query: 304 KSPLNIF 310
+ +
Sbjct: 303 SERIRTY 309
>gi|390991974|ref|ZP_10262223.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372553261|emb|CCF69198.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 361
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KL+ ++R +EL LL+ +V N + RE S L P+ +
Sbjct: 1 MTPTLRRKLQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ + ND EMR A +EI A+ R+ ++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLATAEALRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
Length = 360
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ L V + + RE++ L + + ++ + E
Sbjct: 1 MKSSIVAKLEALQERHEEVEAHLGDATVIADQDRFRALSREYAQLTDVTRCFKEWQSVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ A+ R +E +++ L+LPKD +D+R F+EIRAGTG
Sbjct: 61 DIETAEMMLDDPEMREMAQEELKDARTRSEALEQQLQVLLLPKDPDDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK E++S S E GGYKEIIA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKVSGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGS 300
>gi|374621851|ref|ZP_09694380.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
gi|373940981|gb|EHQ51526.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
Length = 360
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 222/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + R +EL LL +V + + + E+S L P+V+ + Y +
Sbjct: 1 MKDSIRRKLEDIADRFEELSGLLADPQVIGDQDRFRRYSMEYSQLEPVVQGWKAYAAALD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A++M D + +R A +EI R+ +EL++++ ++PKD +D+ N F+EIRAG
Sbjct: 61 ELEAARQMARDPDPDLRAMAEEEIPAVSSRLESLELDLQRHLIPKDPHDENNTFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E++S S E GGY+E+IARIIG VYS+LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAETRGWQVELLSESEGEHGGYREVIARIIGRGVYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSA TVAV+PE DE+E INPADLRIDTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPDTESQGRIHTSAATVAVMPEPDEMEIPEINPADLRIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRR 295
+TDSAVR+TH+PTG+VV+CQ++RSQHKNKA A+ +L A++ ++++ ++QS T R+
Sbjct: 241 RTDSAVRLTHLPTGLVVECQDERSQHKNKARAMSLLAAKLIEREETRRFQEQSAT---RK 297
Query: 296 LLIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 SLVGSGDRSERIRTY 312
>gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
str. 306]
gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|418518287|ref|ZP_13084436.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418523119|ref|ZP_13089143.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|24418638|sp|Q8PNU5.1|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
str. 306]
gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|410700275|gb|EKQ58837.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704364|gb|EKQ62848.1| peptide chain release factor 1 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 361
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KL+ ++R +EL LL+ +V N + RE S L P+ +
Sbjct: 1 MTPTLRRKLQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ + ND EMR A +EI A+ R+ ++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLATAEALRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c]
gi|410624796|ref|ZP_11335586.1| peptide chain release factor 1 [Glaciecola mesophila KMM 241]
gi|119361579|sp|Q15SQ9.1|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas
atlantica T6c]
gi|410155642|dbj|GAC22355.1| peptide chain release factor 1 [Glaciecola mesophila KMM 241]
Length = 362
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ L++Q E+ + Y +E+S L +V+ + +Y+
Sbjct: 1 MKESVQRKLESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQGAQG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +A+EM+ +D EMR A +E +K+ I E E++ L+LPKD ND+ N FIEIRAG
Sbjct: 61 DFESAQEMMQESDPEMREMAQEEYKSSKQAIEQYEDELQILLLPKDPNDESNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E WK E+++ + + GGYKE+IA IIG Y LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTV V+PE E E I +N ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L +R+ + ++Q+ RR L+
Sbjct: 241 KTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKRQAEETSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|365873556|ref|ZP_09413089.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
gi|363983643|gb|EHM09850.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
Length = 357
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 218/307 (71%), Gaps = 3/307 (0%)
Query: 6 LSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITA 65
+ KL++ L E++ + EV NN+++ + HS LYP+V+ + Y++ ++ + A
Sbjct: 4 IGKLKEIEAALAEIEARMADPEVSNNVQEMQSLSKRHSELYPVVQAFKEYQRASKALEEA 63
Query: 66 KEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+++ D +MR A +E+ +R+ ++E E+K L+LP+D ND +++ IEIRAG GGDE
Sbjct: 64 KELMSQEDEDMRALAREEVQRLSERLPELEQELKVLLLPRDPNDHKDVIIEIRAGAGGDE 123
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY R++ER W++EI+ + + IGGYKE++ + G YSKLKFESGVHR
Sbjct: 124 AALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGDGAYSKLKFESGVHR 183
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQR+P TE GRIHTS TVAV+PEA+++ D+ + P DL+IDTYRASGAGGQ++N TDSA
Sbjct: 184 VQRIPATEASGRIHTSTATVAVLPEAEDV-DVQVRPEDLKIDTYRASGAGGQYVNMTDSA 242
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIPTG+VV CQ++RSQ KN+A A+++L AR+ D +L+ QQ+ A R+ +G+ +
Sbjct: 243 VRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDMELQRQQAQMAAERKGQVGTGDR 302
Query: 304 KSPLNIF 310
+ +
Sbjct: 303 SERIRTY 309
>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
Length = 362
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILVKLESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D + A+EM +D EMR A DE+ AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DFVAAEEMTKEDDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ +++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Photobacterium angustum S14]
gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
Length = 362
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKQSILVKLETLVERYEEVQHLLGDASVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK I + E++ L++PKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E W+ EII+ + SE GGYKE+IA++ G VY LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E IN DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola sp. 4H-3-7+YE-5]
gi|410643503|ref|ZP_11353999.1| peptide chain release factor 1 [Glaciecola chathamensis S18K6]
gi|410645140|ref|ZP_11355608.1| peptide chain release factor 1 [Glaciecola agarilytica NO2]
gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola sp. 4H-3-7+YE-5]
gi|410135373|dbj|GAC04007.1| peptide chain release factor 1 [Glaciecola agarilytica NO2]
gi|410136913|dbj|GAC12186.1| peptide chain release factor 1 [Glaciecola chathamensis S18K6]
Length = 362
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ L++Q E+ + Y +E+S L +V+ + +Y+ +
Sbjct: 1 MKESVQRKLESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +A+EM+ +D EMR A +E +K I E E++ L+LPKD ND+ N F+EIRAG
Sbjct: 61 DFESAQEMMQESDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E WK E+++ + + GGYKE+IA IIG Y LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTV V+PE E E I +N ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L +R+ + ++Q+ RR L+
Sbjct: 241 KTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQAEETSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|389775879|ref|ZP_10193725.1| peptide chain release factor 1 [Rhodanobacter spathiphylli B39]
gi|388436942|gb|EIL93772.1| peptide chain release factor 1 [Rhodanobacter spathiphylli B39]
Length = 359
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 217/303 (71%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE S+R E+ LL+Q +VH + + + +E++ L P+ + + ++ +
Sbjct: 8 KLEALSERHHEVGLLLSQPDVHADNSRFRELSQEYAQLEPVAASLREHDQAESELAETRA 67
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E+R A+D++ ++R+ +++ +++ L+LPKD D+ N+++EIRAG+GGDE+A+F
Sbjct: 68 MLDDPELREMAIDDVRRLEQRLQELDGQLQLLLLPKDPRDQANLYLEIRAGSGGDEAAIF 127
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY+R++E W EI+S E GGY+E++AR+ G YS+LKFESG H V+RV
Sbjct: 128 AGDLLRMYLRYAESRRWHVEILSEHAGEHGGYREVVARVEGSGAYSQLKFESGTHCVKRV 187
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TE+QGR+HTS TVAV+PE DEI+DI INPADL+ DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 188 PVTESQGRVHTSTATVAVLPELDEIDDITINPADLKTDTFRASGAGGQHVNKTDSAIRIT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTG VV+CQ +RSQHKN+A A+ +L AR+ D++ +Q + A+ RRL +G+ + +
Sbjct: 248 HLPTGTVVECQEERSQHKNRARAMSLLRARLLDAERSKQTAEQAESRRLQVGTGDRSQRI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|333926798|ref|YP_004500377.1| peptide chain release factor 1 [Serratia sp. AS12]
gi|333931752|ref|YP_004505330.1| peptide chain release factor 1 [Serratia plymuthica AS9]
gi|386328621|ref|YP_006024791.1| Peptide chain release factor 1 [Serratia sp. AS13]
gi|333473359|gb|AEF45069.1| Peptide chain release factor 1 [Serratia plymuthica AS9]
gi|333490858|gb|AEF50020.1| Peptide chain release factor 1 [Serratia sp. AS12]
gi|333960954|gb|AEG27727.1| Peptide chain release factor 1 [Serratia sp. AS13]
Length = 361
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE+S L + + ++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R IF+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGS 300
>gi|416062788|ref|ZP_11581489.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347996927|gb|EGY37965.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 361
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/314 (50%), Positives = 223/314 (71%), Gaps = 7/314 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E++ L +V+ +N + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPK-DKNDKRNIFIEIRAGT 119
++ A+ +L+D EM+ A EI +K + +E ++ L+LPK D ND+ N ++EIRAGT
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKEDPNDEYNCYLEIRAGT 120
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G VY +LKFES
Sbjct: 121 GGDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFES 180
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYRASGAGGQHINK
Sbjct: 181 GGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINK 240
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI---KDSKLREQQSNTAKMRRL 296
TDSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + KL ++Q++T RR
Sbjct: 241 TDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADT---RRN 297
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 298 LLGSGDRSDKIRTY 311
>gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b]
gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b]
Length = 360
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + + RE++ L + + ++++ E
Sbjct: 1 MKTSIVAKLEALQERHEEVEALLGDAGVIADQERFRALSREYAQLSDVTRCFREWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EMR A +E+ ++++ +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DVETAEMLLDDPEMREMAQEELKTSREKREVLEQQLQVLLLPKDPDDERPCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IAR+ G Y + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARVTGDGAYGRFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRHEAEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
vesicatoria ATCC 35937]
gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
vesicatoria ATCC 35937]
Length = 361
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V NN + RE S L P+ + +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRSLSRELSQLEPVAIALEDEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M ND EMR A +EI A+ R+ +++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRNDPEMRELAEEEIAAAQARLDELDAQLALLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD+IE+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ +++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
Length = 365
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 210/303 (69%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL +R +EL+ LL V + + +EH+ L PIVE++ + + ++ KE
Sbjct: 11 KLITICERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKE 70
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
+ +D EM + E + K+ + E ++ +L++P+D D+ NIF+EIRAGTGGDE+A+F
Sbjct: 71 LEDDAEMAEYVAAEQSENLKKTEECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIF 130
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL+RMY RF+E W+ ++S + E GGY+EII R+ G VYS LKFESG HRVQRV
Sbjct: 131 AGDLMRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRV 190
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE GRIHTSA TVAV+PE+DEIEDI INPADLR+DT+RASGAGGQH+NKTDSA+RIT
Sbjct: 191 PETEASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRIT 250
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+PTGIVV+CQ +RSQHKN+A A++ L A++ D + + + A R+ L+G+ + +
Sbjct: 251 HLPTGIVVECQEERSQHKNRAKAMRWLYAKLMDRERQAAEKEIAAERKSLVGTGDRSERI 310
Query: 308 NIF 310
+
Sbjct: 311 RTY 313
>gi|410619679|ref|ZP_11330573.1| peptide chain release factor 1 [Glaciecola polaris LMG 21857]
gi|410160811|dbj|GAC34711.1| peptide chain release factor 1 [Glaciecola polaris LMG 21857]
Length = 362
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE ++R +E+ L++Q E+ Y +E+S L +V+ + Y+
Sbjct: 1 MKQSVQGKLESLTERFEEVQALVSQPEIIAAQDKYRALTKEYSQLEGVVKCFAAYQGAKG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +A+EM+ +D EMR A +E L+K+ I E E++ L+LPKD ND+ N FIEIRAG
Sbjct: 61 DFESAQEMMQESDPEMREMAQEEYKLSKQAIERYEDELQILLLPKDPNDESNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E WK E+++ + + GGYKE+IA +IG Y LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESRRWKVEVVTTNEGDHGGYKEVIANVIGEGSYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTV V+PE E E I +N ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L +R+ + ++Q+ RR L+
Sbjct: 241 KTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEDKRQAEETSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|403058595|ref|YP_006646812.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805921|gb|AFR03559.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 360
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ +K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|416728083|ref|ZP_11847448.1| peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
Length = 281
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/278 (55%), Positives = 207/278 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI 278
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARI 278
>gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2148]
gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2148]
Length = 361
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE + R +E+ LL E ++ + RE+S L +V Y +Y ++
Sbjct: 1 MKASLLTKLETLTDRHEEVSALLGDNETISDQDKFRDLSREYSELEAVVRCYADYSQVKG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML +D ++R A +EI+ R+ +E +++ L+LP+D ND N+F+EIRAG
Sbjct: 61 DLDEARLMLEDSDPDLREMAQEEIDSGSGRLEQLEAQLQALLLPRDPNDSHNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK E++S E GGYKEII R+ G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRVEGRDVYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PEA+ ++ + IN ADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+TH+P+GIVV+CQ++RSQHKN+A A+ +L A++ S + A+ RR L+
Sbjct: 241 KTDSAVRLTHLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKAAEEQAEQRRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSDRIRTY 312
>gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ +K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|381171821|ref|ZP_09880961.1| peptide chain release factor 1 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687781|emb|CCG37448.1| peptide chain release factor 1 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 361
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KL+ ++R +EL LL+ +V N + RE S L P+ +
Sbjct: 1 MTPTLRRKLQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ + ND EMR A +EI A+ R+ ++ ++ L++P+D D N+F+E+RAG+G
Sbjct: 61 DLATAEALRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGSG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
gi|166223605|sp|A0KT88.1|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
ANA-3]
Length = 363
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 211/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +EI AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMLEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITGCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ +K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 225/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ L V + + +E++ L + + ++ ++ + +
Sbjct: 1 MKPSIVAKLEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAEMLLDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E N W+ E++S S E GG+KE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
gi|378767534|ref|YP_005196002.1| peptide chain release factor 1 [Pantoea ananatis LMG 5342]
gi|386015587|ref|YP_005933868.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
gi|386079669|ref|YP_005993194.1| peptide chain release factor 1 PrfA [Pantoea ananatis PA13]
gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
gi|354988850|gb|AER32974.1| peptide chain release factor 1 PrfA [Pantoea ananatis PA13]
gi|365187015|emb|CCF09965.1| peptide chain release factor 1 [Pantoea ananatis LMG 5342]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 222/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + RE++ L + + ++++ +
Sbjct: 1 MKTSIVAKLEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVTRCFRDWQQNQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TAK +L+D EMR+ A +E+ A+++ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DIETAKMLLDDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDERDCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IAR++G Y + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGEGAYGRFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E INP+DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEAEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
gi|259585258|sp|C4LBL5.1|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
Length = 362
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL + V ++ + RE+S L +V + Y++
Sbjct: 1 MKETVIRKLEGLMERYEEVQALLGEPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +EML +D EM+ A +E+ AK+ I +E E++ L+LPKD D N F+EIRAG
Sbjct: 61 DLQAIEEMLSGDDAEMKAMAQEELAEAKQLIERVEAELQVLLLPKDPKDDSNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY ++SER W+ EI+S S E GGYKEII R+ G +VY +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSKYSERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E INPADLRIDT+RASGAGGQHIN
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG VV+CQ++RSQHKNKA A+ +L AR+ + ++++ RR ++
Sbjct: 241 KTDSAIRITHIPTGTVVECQDERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSIL 300
Query: 299 GSVQKKSPLNIF 310
+ + + +
Sbjct: 301 STGDRSDRIRTY 312
>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
33393]
gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
33393]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KL+ +R +EL+ LL V ++ + +E+S L +V+ ++ + ++N
Sbjct: 1 MKPSIINKLDSLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKSFSRWNQLNA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ A+ +L+D EM+ A EI +K + +E ++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 61 NLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W+ E++S + SE GG+KEIIA + G Y +LKFESG
Sbjct: 121 GDEAGIFAGDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP+DLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+ + + + A RR L+GS
Sbjct: 241 DSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLEQEQADTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDKIRTY 310
>gi|398794543|ref|ZP_10554590.1| peptide chain release factor 1 [Pantoea sp. YR343]
gi|398208548|gb|EJM95269.1| peptide chain release factor 1 [Pantoea sp. YR343]
Length = 360
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + RE++ L + + ++++ E
Sbjct: 1 MKSSIVAKLEALQERHEEVEALLGDAGVIADQDRFRALSREYAQLSDVTRCFREWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML D EMR A +E+ L++++ ++E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DVETAEMMLEDPEMREMAQEELKLSREKREELEQQLQVLLLPKDPDDERPCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IARIIG Y + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWQVEIISANEGEHGGYKEVIARIIGDGAYGRFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++ + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAETAKRNAAEASTRRNLLGS 300
>gi|422008530|ref|ZP_16355514.1| peptide chain release factor 1 [Providencia rettgeri Dmel1]
gi|414095003|gb|EKT56666.1| peptide chain release factor 1 [Providencia rettgeri Dmel1]
Length = 360
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 225/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ L V + + +E++ L + + ++ ++ + +
Sbjct: 1 MKPSIVAKLEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAEMLLDDPEMKEMAQEELKEAKGRNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E N W+ E++S S E GG+KE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|46576710|sp|Q7N586.1|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 360
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/300 (52%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L +V + + + RE++ L + + + + +
Sbjct: 1 MKPSIVAKLEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTNCFKAWSAVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML+D EMR A +EI AK R ++E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DLKAAEIMLDDPEMREMAQEEIRDAKVRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK E+IS + E GGYKEIIA++ G VY LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKVSGEQVYGHLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE + E I+P+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++R++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGS 300
>gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2080]
gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium
HTCC2080]
Length = 362
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL R +E+ LL E + + + RE+S L +V + Y+
Sbjct: 1 MKSSLTAKLASLVDRHEEVAALLGDPETAEDTNLFRELSREYSQLDEVVVAFTAYRTATA 60
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EML+D E+R A DE+ ++ + + IE +++ L+LP+DK D N+++EIRAG
Sbjct: 61 DVEAAQEMLSDSDPELREMAADELAVSTELVAKIESDLQVLLLPRDKRDSNNVYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E W+ E IS + GG+KEII+R++G +VY+ LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRVVGNDVYAYLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+ E D++E I+I DLR+DT+R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ + + S A RR L+
Sbjct: 241 TTDSAVRITHLPTGVVVECQDERSQHKNRARAMSLLSARLLTAAEDKAHSEQAAERRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1]
Length = 303
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+DLEMR A +E+ +AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKEIIA+I G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+G+
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGT 300
>gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379]
gi|166223584|sp|A1ASD1.1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
propionicus DSM 2379]
Length = 354
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 219/306 (71%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+E+ +R +EL+ LL+ V +N ++ K REH+ L +V Y Y+++ E++
Sbjct: 1 MFDKIEELERRYQELEALLSDPAVISNQPEFRKLSREHADLTGLVAAYRRYRRVLEEMEG 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D++M+ A +E+ + ++ +E EI+ L+LP+D ND +++ +EIRAGTGGDES
Sbjct: 61 NRELLADVDMKEMAEEELKVLEEEKERLEGEIQMLLLPRDPNDDKSVILEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY RF++ N WK E IS S SE GG+KEIIA + G V++KLK+ESG HRV
Sbjct: 121 ALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASVEGEGVFAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVA++ EA+++ DI+INP DL+ID YR+SGAGGQH+N TDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMAEAEDV-DIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTG VV CQ +RSQ KN+A A+K+L RI DS +EQ + A R+ +GS +
Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRIMDSIQQEQNARMAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
gi|172048528|sp|A5WFG1.1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
PRwf-1]
Length = 364
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 219/314 (69%), Gaps = 5/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ + ++ + + EHS L I L+ Y++
Sbjct: 1 MKDSLRERLDQMVDRFEEVTALLSDPDTISDNNKFRELSMEHSELSEITALWQRYRQAEI 60
Query: 61 DIITAKEMLNDL---EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D A+EM+ND +M+ +EI+ A + I +E E+ ++LPKD NDK F+EIRA
Sbjct: 61 DKKDAQEMINDASDPDMKEMMQEEIDSASRDIEAMEEELNVMMLPKDPNDKVPAFLEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+A+F DL RMY R++ W E++S + E GGYKEII+R+ G +VY +LKF
Sbjct: 121 GTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIISRVSGNDVYGRLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIED-ININPADLRIDTYRASGAGGQH 236
ESG HRVQRVP+TE+QGR+HTSACTVAV+PE EI+D + +NPAD+R+DT+R+SGAGGQH
Sbjct: 181 ESGAHRVQRVPETESQGRVHTSACTVAVMPEV-EIDDTVELNPADIRMDTFRSSGAGGQH 239
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+N TDSAVR+THIPTG+V +CQ +RSQHKN+A A+++L+ARI+ +K++EQ +RR
Sbjct: 240 VNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRN 299
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 300 LVGSGDRSERIRTY 313
>gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
Length = 360
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 199/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE S L P+ + ED+ TA+ M +D E+ A +EI A+ R+ ++ E+ L
Sbjct: 40 REFSQLEPVATALAAEARAREDLATAEAMRDDPELAELAQEEIAAARGRLEQLDHELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++PKD D+ N+F+E+RAGTGGDE+ALF DL RMY R++ER WK E+ S + E GG+
Sbjct: 100 LVPKDPRDEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAERQGWKVEVESDNPGEHGGH 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KEI+ARI+G YSKLKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADEIE+I INP
Sbjct: 160 KEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIEEITINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADL++DT+R+SGAGGQH+NKTDSA+RITH+P+G+VV+ Q +RSQH N+ A+K L A++
Sbjct: 220 ADLKVDTFRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ +QQ+ A+ RRL +GS + + +
Sbjct: 280 DAERSKQQAAQAESRRLQVGSGDRSQRIRTY 310
>gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
gi|238693176|sp|B4EVR7.1|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
Length = 360
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + +V + + + +E++ L I Y ++K+ +
Sbjct: 1 MKPSIVAKLEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDITSCYRQWRKVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML+D EM+ A +E+ A+ ++E +++ L+LPKD +D+ N F+EIRAGTG
Sbjct: 61 DMEAAEMMLDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E+++ + E GGYKEIIA++IG Y LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E I+P+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|319957818|ref|YP_004169081.1| peptide chain release factor 1 [Nitratifractor salsuginis DSM
16511]
gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor
salsuginis DSM 16511]
Length = 355
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 212/293 (72%), Gaps = 1/293 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL+ F R +E++ LL+ E+ ++K + +E S + P+VE Y +I+E I K
Sbjct: 5 KLQPFIDRYEEINRLLSSPEIAADVKKMTELSKEQSSIAPLVEKAQKYLEISEAIEENKA 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D E A +E++ + ++ +E EIK L++PKD ND +NI++E+RAG GGDESALF
Sbjct: 65 MLSDPEFGELAKEELSELEPQLPRLEEEIKVLMIPKDPNDDKNIYLELRAGAGGDESALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
V D+ +MY+RF+ER WK EI+S S GGYKE+IA + G VYSKLKFE+G HRVQRV
Sbjct: 125 VEDMFKMYLRFAERQGWKVEIVSSSEGTAGGYKELIALVKGEGVYSKLKFEAGTHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TETQGR+HTSA TVAVIPE +++E I+I P ++++D YR+SG GGQ +N TDSAVR+T
Sbjct: 185 PATETQGRVHTSAITVAVIPEVEDVE-IDIKPNEIKMDVYRSSGCGGQSVNTTDSAVRLT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTGIVV Q+++SQHKN+ A+K+L AR+ ++ +REQ TA R+L +GS
Sbjct: 244 HLPTGIVVAIQDEKSQHKNRDKAMKVLKARVHEAMMREQMEETAGQRKLQVGS 296
>gi|350560643|ref|ZP_08929483.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349782911|gb|EGZ37194.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 361
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK KLE S+R E+ LL + + + + + E+S L P+ + + +
Sbjct: 1 MKESFRRKLEGLSERHTEIARLLAAPDAAADAERFRRLSMEYSQLEPVAAAWRAFVGNQD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +A+ +LND E +R A DEI + + +E E+++ ++P D +D+ N+F+EIRAG
Sbjct: 61 ALASARALLNDPEPEVRALAEDEIQRLEAQDEQLERELQRHLVPADPHDQANLFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DLLRMY R++E+ W+ EI++ S E GGY+E+I R+IG Y++LKFE
Sbjct: 121 TGGDEAALFAGDLLRMYSRYAEQRGWQMEILNASEGEHGGYREVIVRLIGRGAYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSA TVA++PE DE+E INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSAATVAILPEIDEVEMPEINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSAVR+TH+PTG+VV+CQ++RSQHKNKA A+K+L AR+ +++ Q + + R+ L+
Sbjct: 241 RTDSAVRLTHLPTGLVVECQDERSQHKNKARAMKLLAARLHEAERSRQAAEQSAARKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 333
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 196/271 (72%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
+E+S L +V +N +KK+N DI A+ +L+D +M++ A +EI K I ++E ++ L
Sbjct: 13 KEYSQLEEVVTTFNRWKKLNNDIEEAQILLDDPDMKDMAAEEIAENKAEIENLEQHLQIL 72
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
+LPKD ND+ N F+EIRAGTGGDE+ +F DL RMY R+ E W+ E +S + SE GGY
Sbjct: 73 LLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGY 132
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KEII +I G VY +LKFESG HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP
Sbjct: 133 KEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINP 192
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
DLRIDTYR+SGAGGQH+N TDSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI
Sbjct: 193 TDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIV 252
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ Q + A RR L+GS + + +
Sbjct: 253 QVEQERQAAEQADTRRNLLGSGDRSDKIRTY 283
>gi|336123568|ref|YP_004565616.1| peptide Chain Release factor [Vibrio anguillarum 775]
gi|335341291|gb|AEH32574.1| Bacterial Peptide Chain Release Factor [Vibrio anguillarum 775]
Length = 362
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL + V ++ + +E+S L + + + Y++ E
Sbjct: 1 MKASILVKLESLVERYEEVQRLLGEPTVISDQNKFRTLSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM D EMR A +EI +AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMTKEEDAEMREMAQEEIKIAKATIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R++E+ W+ EI+S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRYAEKMSWRIEIMSASYAEHGGYKEVIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIAQAEEAKRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|448241778|ref|YP_007405831.1| peptide chain release factor RF-1 [Serratia marcescens WW4]
gi|445212142|gb|AGE17812.1| peptide chain release factor RF-1 [Serratia marcescens WW4]
Length = 361
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ A+ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQEELKQARASSEALEQQLQVLLLPKDPDDERSCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S + E GG+KE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEGRRWRVEVMSANEGEHGGFKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPDINPGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGS 300
>gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
gi|425067915|ref|ZP_18471031.1| peptide chain release factor 1 [Proteus mirabilis WGLW6]
gi|425072685|ref|ZP_18475791.1| peptide chain release factor 1 [Proteus mirabilis WGLW4]
gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
gi|404596459|gb|EKA96979.1| peptide chain release factor 1 [Proteus mirabilis WGLW4]
gi|404600653|gb|EKB01083.1| peptide chain release factor 1 [Proteus mirabilis WGLW6]
Length = 360
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + +V + + + +E++ L + Y ++K+ +
Sbjct: 1 MKPSIVAKLEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDVTSCYRQWRKVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML+D EM+ A +E+ A+ ++E +++ L+LPKD +D+ N F+EIRAGTG
Sbjct: 61 DMEAAEMMLDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E+++ + E GGYKEIIA++IG Y LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E I+P+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259585241|sp|C6DHY1.1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 360
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
gi|385871955|gb|AFI90475.1| Peptide chain release factor 1 [Pectobacterium sp. SCC3193]
Length = 360
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 220/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|430761943|ref|YP_007217800.1| Peptide chain release factor 1 [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430011567|gb|AGA34319.1| Peptide chain release factor 1 [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 361
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 217/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK KLE S+R E+ LL + + + + + E+S L P+ + + + E
Sbjct: 1 MKESFRRKLEGLSERHTEIARLLAAPDAAADAERFRRLSMEYSQLEPVASAWQAFVENQE 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ +A+ +LND E +R A DEI + + +E E+++ ++P D +D N+F+EIRAG
Sbjct: 61 ALASARALLNDPEPEVRALAEDEIQRLETQDERLEQELQRHLVPADPHDDANLFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DLLRMY R++E+ W+ EI++ S E GGY+E+I R+IG Y++LKFE
Sbjct: 121 TGGDEAAIFAGDLLRMYSRYAEQRGWQMEILNASEGEHGGYREVIVRVIGRGAYARLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSA TVA++PE DE+E INPADLRIDTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSAATVAILPELDEVERPEINPADLRIDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSAVR+TH+PTG+VV+CQ++RSQHKNKA A+ +L AR+ +++ Q + + R+ L+
Sbjct: 241 RTDSAVRLTHLPTGMVVECQDERSQHKNKARAMNLLAARLHEAERSRQAAEQSAARKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|453062020|gb|EMF03015.1| peptide chain release factor 1 [Serratia marcescens VGH107]
Length = 361
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 218/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + ++++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ A+ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLETAEMMLDDPEMREMAQEELKQARATSEALEQQLQVLLLPKDPDDERSCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S + E GG+KE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEGRRWRVEVMSANEGEHGGFKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INP DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPDINPGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGS 300
>gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 333
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
+E+S L +V +N +KK+N DI A+ +L+D +M+ A +EI K I ++E ++ L
Sbjct: 13 KEYSQLEEVVTTFNRWKKLNSDIEEAQILLDDPDMKEMAAEEIAENKAEIENLEQHLQIL 72
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
+LPKD ND+ N F+EIRAGTGGDE+ +F DL RMY R+ E W+ E +S + SE GGY
Sbjct: 73 LLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGY 132
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KEII +I G VY +LKFESG HRVQRVPKTE+QGRIHTSACTVAV+PE E E INP
Sbjct: 133 KEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINP 192
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
DLRIDTYR+SGAGGQH+N TDSAVRITHIPTGIVV+CQ++RSQHKNKA AL +L +RI
Sbjct: 193 TDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIV 252
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ Q + A RR L+GS + + +
Sbjct: 253 QVEQERQAAEQADTRRNLLGSGDRSDKIRTY 283
>gi|407071534|ref|ZP_11102372.1| peptide chain release factor 1 [Vibrio cyclitrophicus ZF14]
Length = 362
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL +V N + +E+S L + + +Y++ E
Sbjct: 1 MKASILVKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTACFQSYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A DEI AK I + E++ L++PKD ND+RN F+EIRAG
Sbjct: 61 DLEAAEEMANEDDAEMREMAQDEIKDAKAAIERLTDELQILLIPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ EI+S + SE GGYKE+IA++ G VY +KFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEIMSSNASEQGGYKEMIAKVSGDAVYGTMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E + I DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAAVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386308698|ref|YP_006004754.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241655|ref|ZP_12868180.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420258237|ref|ZP_14760976.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433549287|ref|ZP_20505331.1| Peptide chain release factor 1 [Yersinia enterocolitica IP 10393]
gi|166223618|sp|A1JRU0.1|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|351778920|gb|EHB21050.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404514373|gb|EKA28169.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431788422|emb|CCO68371.1| Peptide chain release factor 1 [Yersinia enterocolitica IP 10393]
Length = 360
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A DE+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRNLLGS 300
>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
gi|32171537|sp|Q8DFF9.2|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46576703|sp|Q7MMY6.2|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
Length = 362
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL V + + +E+S L + + + YK+ E
Sbjct: 1 MKASILTKLEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK I D+ E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703]
Length = 330
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D EMR A DE+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRNLLGS 300
>gi|335424587|ref|ZP_08553595.1| peptide chain release factor 1 [Salinisphaera shabanensis E1L3A]
gi|334888925|gb|EGM27220.1| peptide chain release factor 1 [Salinisphaera shabanensis E1L3A]
Length = 361
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE+ +R ++L L+ EV + + + +E++ L + Y ++ + +
Sbjct: 1 MKDSLRAKLEELVERHEDLAHSLSDPEVIGDQDKFRRMSQEYAQLESLSADYRAWRALVD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ +EM N + E+R A E++ A++R+ +E ++K ++P+D ND N+++EIRAG
Sbjct: 61 EMADLEEMENSDEAELREMAEVELDDARERLVGLEAALRKHLIPRDPNDNANLYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DLLRMY ++E+ W+ EI+S S E GGYKE+I+R+IG +S+LKFE
Sbjct: 121 TGGDEAALFAGDLLRMYSSYAEKQGWQVEILSASEGEHGGYKEVISRLIGTGAFSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE DE+ I+IN D+R+DT+RA GAGGQHIN
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVLPEQDEVGAIDINANDIRVDTFRAQGAGGQHIN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ +RSQHKN+A A+ +L ++ ++ +Q S A R+ L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQQERSQHKNRARAMSLLQTKLMTAEQDKQASEQAATRKKLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|410622124|ref|ZP_11332963.1| peptide chain release factor 1 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410158522|dbj|GAC28337.1| peptide chain release factor 1 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 362
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V N + +E+S L +V + +Y+ +
Sbjct: 1 MKQSVVNKLESLVERFEEVQALLGDPSVIGNQDKFRNLSKEYSQLEAVVTQFGSYQSAQK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A EM+ ND E++ A +E+ +K R+ ++E+ ++ L+LPKD D + F+EIRAG
Sbjct: 61 DVESALEMIQENDPEIKEMAQEELKDSKSRVEELEMSLQILLLPKDPKDDNSCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E WK E++S +L + GGYKE+I + G Y LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETKGWKLELMSSNLGDHGGYKEVIVNVSGAGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E E I IN DLR+DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEIPESEAIEINSGDLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+TH+PTG+VV+CQ++RSQHKN+A A+ +L AR+ + ++ + A R+ L+
Sbjct: 241 KTDSAIRLTHLPTGVVVECQDERSQHKNRARAMSVLQARLNQIEEDKRNAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|336316446|ref|ZP_08571344.1| peptide chain release factor 1 [Rheinheimera sp. A13L]
gi|335879225|gb|EGM77126.1| peptide chain release factor 1 [Rheinheimera sp. A13L]
Length = 363
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 220/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ V ++ + + +E+S L + + + +Y++ +
Sbjct: 1 MKESVYRKLEALVERYEEVQALLSDAGVISDQSRFRELSKEYSQLEELSQAFGSYRQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A++M+ +D EMR+ A DE AK+RI ++ +++ L+LPKD ND + F+EIRAG
Sbjct: 61 DLASAEDMMKDSDPEMRDMAQDEYKAAKERIEQLDQDLQILLLPKDPNDSNSCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F D+ RMY RF ER WK EI+S + E GGYKE+IA I G Y LKFE
Sbjct: 121 AGGDEAAIFAGDVFRMYSRFCERKRWKVEIVSCNDGEHGGYKEVIASIQGEGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I INPADL++DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEVPESEAIEINPADLKVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTGIVV+CQ++RSQHKN+A A+ +L +RI+ ++ +++ RR L+
Sbjct: 241 RTDSAIRITHLPTGIVVECQDERSQHKNRARAMSVLQSRIQAAEDEKRRLVEESTRRSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|336310167|ref|ZP_08565139.1| peptide chain release factor 1 [Shewanella sp. HN-41]
gi|335865897|gb|EGM70888.1| peptide chain release factor 1 [Shewanella sp. HN-41]
Length = 363
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 211/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAQLERLEAELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGDGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
Length = 363
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL V + + +E+S L + + + YK+ E
Sbjct: 2 MKASILTKLEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQE 61
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK I D+ E++ L+LPKD ND RN F+EIRAG
Sbjct: 62 DLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAG 121
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 122 AGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFE 181
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 182 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 241
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 242 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRNLL 301
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 302 GSGDRSDRIRTY 313
>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
gi|61214628|sp|Q6LNB4.1|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
SS9]
Length = 362
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL + + + +E+S L I + + Y +
Sbjct: 1 MKSSILVKLETLVERYEEIQHLLGDPGIIGDQNKFRALSKEYSQLEDITQCFQAYLGAKD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +E+ +K I +E E++ L++PKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKDDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R++ER W+ E+I+ + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
gi|119361603|sp|Q12QR8.1|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
denitrificans OS217]
Length = 361
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 217/302 (71%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ +L V ++ + + +E+S L +V+ + +++
Sbjct: 1 MKQSVIGKLEGLLERNEEVLAMLGDATVISDQERFRALSKEYSQLEDVVKSFKAFQQAQL 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AKK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 DLASAKEMLQEDDAEMREMAQEEMKAAKKVIEQLEDELQILLLPKDPNDDTNAFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF E N W+ E+++ + +++GG+KEII ++ G VY KLK+E
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFCEANKWQVEVMNVNEADLGGFKEIIVKVSGEGVYGKLKYE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+ E E E I+INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+GI+V+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAIEDEKRRSAEETTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
gi|166223603|sp|A3QH30.1|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
loihica PV-4]
Length = 361
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 217/305 (71%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ E+ + + + +E+S L +V+ + Y++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDAEIIADQERFRALSKEYSQLEDVVKSFKAYRQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A+EML +D +++ A +EI AK + +E E++ L+LPKD D N F+EIRAG
Sbjct: 61 DLASAQEMLAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R+ E N W+ EI++ + E GG+KEII ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
KTDSA+RITHIP+GIVV+CQ+ RSQHKN+A A+ +L ARI+ D K R ++ +T RR
Sbjct: 241 KTDSAIRITHIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEEEST---RR 297
Query: 296 LLIGS 300
L+ S
Sbjct: 298 NLVAS 302
>gi|348029556|ref|YP_004872242.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
gi|347946899|gb|AEP30249.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
Length = 362
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 211/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V N + + +E++ L +V+ + +Y+ +
Sbjct: 1 MKQSVVHKLESLVERFEEVQALLGDASVIGNQEKFRNLSKEYAQLEEVVKQFGSYQSAQK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +A EML ND EM+ A +E+ +K R+ +E ++ L+LP D ND + F+EIRAG
Sbjct: 61 DVESALEMLQENDPEMKEMAQEELKDSKARVETLETSLQILLLPTDPNDDNSCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E WK E+IS + + GG+KEII I G Y +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAETKGWKLELISANEGDHGGFKEIIVNISGDGAYGVMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVAV+PE E + I INPADLR+DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAVLPEVPESQAIEINPADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L AR+ + ++ + A R+ L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSVLQARLNKIEEDKRNAEEASTRKTLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
51756]
gi|340781209|ref|YP_004747816.1| peptide chain release factor 1 [Acidithiobacillus caldus SM-1]
gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
51756]
gi|340555362|gb|AEK57116.1| Peptide chain release factor 1 [Acidithiobacillus caldus SM-1]
Length = 365
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 213/307 (69%), Gaps = 3/307 (0%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
++LE+ ++R +EL L E+ + + RE + PI+EL +++ + A+
Sbjct: 9 AQLEQLAERAEELQKALASPEIVQDNARFQAFSRELGEIQPILELLQAHEEQRQRWDEAR 68
Query: 67 EML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
E+L D E+R A ++ A+ + IE ++ +LP+D ND+RN+F+EIRAGTGG+E
Sbjct: 69 ELLLAERDPELRALAEEDQREAEAELARIEESLQVRLLPRDPNDERNVFLEIRAGTGGEE 128
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY R++E + ++S + SE GGYKEI+ I G YS+LKFESG HR
Sbjct: 129 AALFAADLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRGAYSRLKFESGGHR 188
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSACTVAV+PE D + +I+I P+DLRIDTYRASGAGGQH+NKTDSA
Sbjct: 189 VQRVPETESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRASGAGGQHVNKTDSA 248
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
+RITH+PTG+VV CQ DRSQHKN+A A+ +L AR+ + +Q+S+TA RR LIGS +
Sbjct: 249 IRITHLPTGLVVACQEDRSQHKNRARAMALLQARLLEMVREQQESSTAATRRSLIGSGDR 308
Query: 304 KSPLNIF 310
+ +
Sbjct: 309 SERIRTY 315
>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM10+]
gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
str. 91001]
gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
31758]
gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
gi|384122371|ref|YP_005504991.1| peptide chain release factor 1 [Yersinia pestis D106004]
gi|384126230|ref|YP_005508844.1| peptide chain release factor 1 [Yersinia pestis D182038]
gi|384140155|ref|YP_005522857.1| peptide chain release factor 1 [Yersinia pestis A1122]
gi|384414801|ref|YP_005624163.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420546884|ref|ZP_15044827.1| peptide chain release factor 1 [Yersinia pestis PY-01]
gi|420552212|ref|ZP_15049589.1| peptide chain release factor 1 [Yersinia pestis PY-02]
gi|420557724|ref|ZP_15054439.1| peptide chain release factor 1 [Yersinia pestis PY-03]
gi|420563234|ref|ZP_15059309.1| peptide chain release factor 1 [Yersinia pestis PY-04]
gi|420568276|ref|ZP_15063887.1| peptide chain release factor 1 [Yersinia pestis PY-05]
gi|420571504|ref|ZP_15066829.1| peptide chain release factor 1 [Yersinia pestis PY-06]
gi|420579222|ref|ZP_15073808.1| peptide chain release factor 1 [Yersinia pestis PY-07]
gi|420584590|ref|ZP_15078681.1| peptide chain release factor 1 [Yersinia pestis PY-08]
gi|420589716|ref|ZP_15083292.1| peptide chain release factor 1 [Yersinia pestis PY-09]
gi|420595094|ref|ZP_15088136.1| peptide chain release factor 1 [Yersinia pestis PY-10]
gi|420600716|ref|ZP_15093145.1| peptide chain release factor 1 [Yersinia pestis PY-11]
gi|420606201|ref|ZP_15098078.1| peptide chain release factor 1 [Yersinia pestis PY-12]
gi|420611553|ref|ZP_15102899.1| peptide chain release factor 1 [Yersinia pestis PY-13]
gi|420616942|ref|ZP_15107642.1| peptide chain release factor 1 [Yersinia pestis PY-14]
gi|420622246|ref|ZP_15112358.1| peptide chain release factor 1 [Yersinia pestis PY-15]
gi|420627346|ref|ZP_15116984.1| peptide chain release factor 1 [Yersinia pestis PY-16]
gi|420632462|ref|ZP_15121598.1| peptide chain release factor 1 [Yersinia pestis PY-19]
gi|420637672|ref|ZP_15126269.1| peptide chain release factor 1 [Yersinia pestis PY-25]
gi|420643199|ref|ZP_15131285.1| peptide chain release factor 1 [Yersinia pestis PY-29]
gi|420648419|ref|ZP_15136032.1| peptide chain release factor 1 [Yersinia pestis PY-32]
gi|420654054|ref|ZP_15141096.1| peptide chain release factor 1 [Yersinia pestis PY-34]
gi|420659541|ref|ZP_15146027.1| peptide chain release factor 1 [Yersinia pestis PY-36]
gi|420664834|ref|ZP_15150762.1| peptide chain release factor 1 [Yersinia pestis PY-42]
gi|420669754|ref|ZP_15155234.1| peptide chain release factor 1 [Yersinia pestis PY-45]
gi|420675110|ref|ZP_15160105.1| peptide chain release factor 1 [Yersinia pestis PY-46]
gi|420680701|ref|ZP_15165170.1| peptide chain release factor 1 [Yersinia pestis PY-47]
gi|420685984|ref|ZP_15169888.1| peptide chain release factor 1 [Yersinia pestis PY-48]
gi|420691166|ref|ZP_15174463.1| peptide chain release factor 1 [Yersinia pestis PY-52]
gi|420696954|ref|ZP_15179533.1| peptide chain release factor 1 [Yersinia pestis PY-53]
gi|420708227|ref|ZP_15188955.1| peptide chain release factor 1 [Yersinia pestis PY-55]
gi|420713641|ref|ZP_15193802.1| peptide chain release factor 1 [Yersinia pestis PY-56]
gi|420719099|ref|ZP_15198550.1| peptide chain release factor 1 [Yersinia pestis PY-58]
gi|420724634|ref|ZP_15203352.1| peptide chain release factor 1 [Yersinia pestis PY-59]
gi|420730241|ref|ZP_15208368.1| peptide chain release factor 1 [Yersinia pestis PY-60]
gi|420735271|ref|ZP_15212922.1| peptide chain release factor 1 [Yersinia pestis PY-61]
gi|420740746|ref|ZP_15217848.1| peptide chain release factor 1 [Yersinia pestis PY-63]
gi|420746268|ref|ZP_15222610.1| peptide chain release factor 1 [Yersinia pestis PY-64]
gi|420751884|ref|ZP_15227512.1| peptide chain release factor 1 [Yersinia pestis PY-65]
gi|420754437|ref|ZP_15229815.1| peptide chain release factor 1 [Yersinia pestis PY-66]
gi|420762907|ref|ZP_15236764.1| peptide chain release factor 1 [Yersinia pestis PY-71]
gi|420768119|ref|ZP_15241463.1| peptide chain release factor 1 [Yersinia pestis PY-72]
gi|420773168|ref|ZP_15246009.1| peptide chain release factor 1 [Yersinia pestis PY-76]
gi|420778683|ref|ZP_15250894.1| peptide chain release factor 1 [Yersinia pestis PY-88]
gi|420784280|ref|ZP_15255799.1| peptide chain release factor 1 [Yersinia pestis PY-89]
gi|420789521|ref|ZP_15260462.1| peptide chain release factor 1 [Yersinia pestis PY-90]
gi|420795021|ref|ZP_15265415.1| peptide chain release factor 1 [Yersinia pestis PY-91]
gi|420800077|ref|ZP_15269955.1| peptide chain release factor 1 [Yersinia pestis PY-92]
gi|420805467|ref|ZP_15274824.1| peptide chain release factor 1 [Yersinia pestis PY-93]
gi|420810766|ref|ZP_15279604.1| peptide chain release factor 1 [Yersinia pestis PY-94]
gi|420816343|ref|ZP_15284619.1| peptide chain release factor 1 [Yersinia pestis PY-95]
gi|420821619|ref|ZP_15289378.1| peptide chain release factor 1 [Yersinia pestis PY-96]
gi|420826718|ref|ZP_15293945.1| peptide chain release factor 1 [Yersinia pestis PY-98]
gi|420832416|ref|ZP_15299092.1| peptide chain release factor 1 [Yersinia pestis PY-99]
gi|420837288|ref|ZP_15303497.1| peptide chain release factor 1 [Yersinia pestis PY-100]
gi|420842457|ref|ZP_15308181.1| peptide chain release factor 1 [Yersinia pestis PY-101]
gi|420848104|ref|ZP_15313264.1| peptide chain release factor 1 [Yersinia pestis PY-102]
gi|420853614|ref|ZP_15318025.1| peptide chain release factor 1 [Yersinia pestis PY-103]
gi|420858966|ref|ZP_15322653.1| peptide chain release factor 1 [Yersinia pestis PY-113]
gi|421763506|ref|ZP_16200301.1| peptide chain release factor 1 [Yersinia pestis INS]
gi|20139332|sp|Q8ZEX8.1|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361639|sp|Q1C854.1|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361640|sp|Q1CJK1.1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223619|sp|A4TJN7.1|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166977371|sp|A7FIG1.1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238687250|sp|A9QZ08.1|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238688460|sp|B1JM85.1|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238691366|sp|B2K2Z0.1|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM10+]
gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
str. 91001]
gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
Nepal516]
gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
Antiqua]
gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
Pestoides F]
gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
31758]
gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342855284|gb|AEL73837.1| peptide chain release factor 1 [Yersinia pestis A1122]
gi|391426442|gb|EIQ88623.1| peptide chain release factor 1 [Yersinia pestis PY-01]
gi|391428162|gb|EIQ90172.1| peptide chain release factor 1 [Yersinia pestis PY-02]
gi|391429322|gb|EIQ91187.1| peptide chain release factor 1 [Yersinia pestis PY-03]
gi|391441982|gb|EIR02421.1| peptide chain release factor 1 [Yersinia pestis PY-04]
gi|391443654|gb|EIR03949.1| peptide chain release factor 1 [Yersinia pestis PY-05]
gi|391452162|gb|EIR11594.1| peptide chain release factor 1 [Yersinia pestis PY-06]
gi|391459059|gb|EIR17866.1| peptide chain release factor 1 [Yersinia pestis PY-07]
gi|391460160|gb|EIR18887.1| peptide chain release factor 1 [Yersinia pestis PY-08]
gi|391462382|gb|EIR20903.1| peptide chain release factor 1 [Yersinia pestis PY-09]
gi|391475090|gb|EIR32319.1| peptide chain release factor 1 [Yersinia pestis PY-10]
gi|391476904|gb|EIR33983.1| peptide chain release factor 1 [Yersinia pestis PY-11]
gi|391477324|gb|EIR34360.1| peptide chain release factor 1 [Yersinia pestis PY-12]
gi|391490933|gb|EIR46538.1| peptide chain release factor 1 [Yersinia pestis PY-13]
gi|391492041|gb|EIR47544.1| peptide chain release factor 1 [Yersinia pestis PY-15]
gi|391494270|gb|EIR49523.1| peptide chain release factor 1 [Yersinia pestis PY-14]
gi|391506610|gb|EIR60514.1| peptide chain release factor 1 [Yersinia pestis PY-16]
gi|391507444|gb|EIR61272.1| peptide chain release factor 1 [Yersinia pestis PY-19]
gi|391511902|gb|EIR65269.1| peptide chain release factor 1 [Yersinia pestis PY-25]
gi|391522310|gb|EIR74705.1| peptide chain release factor 1 [Yersinia pestis PY-29]
gi|391524873|gb|EIR77051.1| peptide chain release factor 1 [Yersinia pestis PY-34]
gi|391525975|gb|EIR78066.1| peptide chain release factor 1 [Yersinia pestis PY-32]
gi|391537918|gb|EIR88764.1| peptide chain release factor 1 [Yersinia pestis PY-36]
gi|391540531|gb|EIR91149.1| peptide chain release factor 1 [Yersinia pestis PY-42]
gi|391542428|gb|EIR92886.1| peptide chain release factor 1 [Yersinia pestis PY-45]
gi|391555740|gb|EIS04884.1| peptide chain release factor 1 [Yersinia pestis PY-46]
gi|391556214|gb|EIS05312.1| peptide chain release factor 1 [Yersinia pestis PY-47]
gi|391557529|gb|EIS06519.1| peptide chain release factor 1 [Yersinia pestis PY-48]
gi|391571032|gb|EIS18437.1| peptide chain release factor 1 [Yersinia pestis PY-52]
gi|391571625|gb|EIS18950.1| peptide chain release factor 1 [Yersinia pestis PY-53]
gi|391583983|gb|EIS29573.1| peptide chain release factor 1 [Yersinia pestis PY-55]
gi|391587103|gb|EIS32318.1| peptide chain release factor 1 [Yersinia pestis PY-56]
gi|391599199|gb|EIS42846.1| peptide chain release factor 1 [Yersinia pestis PY-58]
gi|391600425|gb|EIS43957.1| peptide chain release factor 1 [Yersinia pestis PY-60]
gi|391602121|gb|EIS45456.1| peptide chain release factor 1 [Yersinia pestis PY-59]
gi|391615016|gb|EIS56829.1| peptide chain release factor 1 [Yersinia pestis PY-61]
gi|391615624|gb|EIS57370.1| peptide chain release factor 1 [Yersinia pestis PY-63]
gi|391620710|gb|EIS61837.1| peptide chain release factor 1 [Yersinia pestis PY-64]
gi|391627189|gb|EIS67428.1| peptide chain release factor 1 [Yersinia pestis PY-65]
gi|391638398|gb|EIS77205.1| peptide chain release factor 1 [Yersinia pestis PY-71]
gi|391640919|gb|EIS79408.1| peptide chain release factor 1 [Yersinia pestis PY-72]
gi|391650447|gb|EIS87730.1| peptide chain release factor 1 [Yersinia pestis PY-76]
gi|391650717|gb|EIS87973.1| peptide chain release factor 1 [Yersinia pestis PY-66]
gi|391655028|gb|EIS91809.1| peptide chain release factor 1 [Yersinia pestis PY-88]
gi|391659641|gb|EIS95904.1| peptide chain release factor 1 [Yersinia pestis PY-89]
gi|391663516|gb|EIS99352.1| peptide chain release factor 1 [Yersinia pestis PY-90]
gi|391670852|gb|EIT05852.1| peptide chain release factor 1 [Yersinia pestis PY-91]
gi|391680897|gb|EIT14907.1| peptide chain release factor 1 [Yersinia pestis PY-93]
gi|391682388|gb|EIT16273.1| peptide chain release factor 1 [Yersinia pestis PY-92]
gi|391683016|gb|EIT16828.1| peptide chain release factor 1 [Yersinia pestis PY-94]
gi|391694800|gb|EIT27429.1| peptide chain release factor 1 [Yersinia pestis PY-95]
gi|391698233|gb|EIT30558.1| peptide chain release factor 1 [Yersinia pestis PY-96]
gi|391699509|gb|EIT31696.1| peptide chain release factor 1 [Yersinia pestis PY-98]
gi|391709435|gb|EIT40614.1| peptide chain release factor 1 [Yersinia pestis PY-99]
gi|391715585|gb|EIT46111.1| peptide chain release factor 1 [Yersinia pestis PY-100]
gi|391716294|gb|EIT46756.1| peptide chain release factor 1 [Yersinia pestis PY-101]
gi|391726709|gb|EIT56024.1| peptide chain release factor 1 [Yersinia pestis PY-102]
gi|391729970|gb|EIT58898.1| peptide chain release factor 1 [Yersinia pestis PY-103]
gi|391735058|gb|EIT63254.1| peptide chain release factor 1 [Yersinia pestis PY-113]
gi|411176407|gb|EKS46427.1| peptide chain release factor 1 [Yersinia pestis INS]
Length = 360
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+DLEMR A +E+ +AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKEIIA+I G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+G+
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGT 300
>gi|365540924|ref|ZP_09366099.1| peptide chain release factor 1 [Vibrio ordalii ATCC 33509]
Length = 362
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL + V ++ + +E+S L + + + Y++ E
Sbjct: 1 MKASILVKLESLVERYEEVQRLLGEPTVISDQNKFRTLSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMTKDEDAEMREMAQEEIKAAKATIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R++E+ W+ EI+S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRYAEKMSWRIEIMSASYAEHGGYKEVIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIAQAEEAKRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
gi|119361605|sp|Q0HFC8.1|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361606|sp|Q0HYK8.1|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-4]
gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-7]
Length = 363
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 211/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQALA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +EI AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMLEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|406979948|gb|EKE01634.1| hypothetical protein ACD_21C00086G0001 [uncultured bacterium]
Length = 361
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 155/314 (49%), Positives = 216/314 (68%), Gaps = 5/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ ++SKL + R +E+ LL E+ N+ Y + +E++ L PIV Y +
Sbjct: 1 MQASIISKLNLLATRHQEISDLLASPEIINDQNRYRELSKEYAHLEPIVTALKEYNDNQQ 60
Query: 61 DIITAKEMLN---DLEMRNFALDE-INLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIR 116
I A+ +L D +++ A +E ++LA + IE ++ L+LP+D ND+RN+F+EIR
Sbjct: 61 KIADAETILQEEQDADLKALAQEELVSLANEHQA-IEAKLHTLLLPQDPNDERNVFLEIR 119
Query: 117 AGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLK 176
G GGDE+A+FV DL RMY + E W+ E+I+ S E GGYKEII RIIG YS+LK
Sbjct: 120 GGAGGDEAAIFVGDLFRMYSHYVEDAGWRIELINSSQGEHGGYKEIIVRIIGKGAYSRLK 179
Query: 177 FESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQH 236
FESG HRVQRVP+TE QGRIHTS CTVAVI EADEI+DI INPADL+ DTYR+SGAGGQH
Sbjct: 180 FESGTHRVQRVPETEAQGRIHTSTCTVAVIAEADEIDDITINPADLKTDTYRSSGAGGQH 239
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+N TDSAVRITH+PTG+VV+CQ++RSQHKN+A A+ +L A++ ++ +Q+ A RR
Sbjct: 240 VNVTDSAVRITHLPTGVVVECQDERSQHKNRARAMSLLKAKLLAAEREKQEKEQAATRRS 299
Query: 297 LIGSVQKKSPLNIF 310
++G+ + + +
Sbjct: 300 MVGTGDRSERIRTY 313
>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
gi|32171552|sp|Q8EAR3.1|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24350136|gb|AAN56810.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
Length = 363
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 210/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +EI AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMLEEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|383813514|ref|ZP_09968939.1| peptide chain release factor 1 [Serratia sp. M24T3]
gi|383297659|gb|EIC85968.1| peptide chain release factor 1 [Serratia sp. M24T3]
Length = 360
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ +L V + + RE++ L + + +++ E
Sbjct: 1 MKPSIVAKLEVLQERHEEVQAMLGDAAVIADQDKFRNLSREYAQLSDVSACFLTWRQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EMR A DEI + ++ ++E E++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLAAAQEMLDDPEMREMAQDEIQQCQTKLEELEQELQLLLLPKDPDDERSCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G VY + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRHQEEASTRRNLLGS 300
>gi|226739120|sp|B8CQV2.1|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
Length = 361
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 222/315 (70%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ + + + + +E+S L +V+ + ++++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDAGIIADQERFRALSKEYSQLEDVVKAFKSFQQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEM+ +D E++ A +E AK+ I +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMMEEDDAELKEMAQEEYKAAKETIETLESELQILLLPKDPNDDNNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY +++E N W+ E+++ + E GG+KE+IA+I G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSKYAESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ D K R ++ +T RR
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEDST---RR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+ S + + +
Sbjct: 298 NLVSSGDRSERIRTY 312
>gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
30120]
gi|422018281|ref|ZP_16364838.1| peptide chain release factor 1 [Providencia alcalifaciens Dmel2]
gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
30120]
gi|414104573|gb|EKT66138.1| peptide chain release factor 1 [Providencia alcalifaciens Dmel2]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 224/310 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ L V + + +E++ L + + + ++ + +
Sbjct: 1 MKPSIVAKLEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLTDVAKCFTAWRTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK+R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAQMLLDDPEMKEMAQEELKEAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E N W+ E++S S E GGYKE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACT+A++PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++ + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRHAAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|421079477|ref|ZP_15540415.1| Bacterial peptide chain release factor 1 [Pectobacterium wasabiae
CFBP 3304]
gi|401705563|gb|EJS95748.1| Bacterial peptide chain release factor 1 [Pectobacterium wasabiae
CFBP 3304]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ K I +E +++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKEGKAAIEALEQQLQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQLEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 221/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + +E++ L + + ++ + E
Sbjct: 1 MKPSIVAKLEALQERYEEIQAHLADAGVIADQDRFRALSKEYAQLTDVANCFTAWQAVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK+R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAQMLLDDPEMKEMAQEELKDAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E N W+ E++S S E GGYKE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACT+AV+PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++ A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKRHEAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
32953]
gi|81639458|sp|Q66AX5.1|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
32953]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 216/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+DLEMR A +E+ +AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA+I G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKISGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+G+
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGT 300
>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
Length = 361
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 214/305 (70%), Gaps = 3/305 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L + + +E++ + V +N+K+ ++H+ L P+VEL+ Y+++ + AK
Sbjct: 9 RLAEIEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEYRQVEAGLAEAKS 68
Query: 68 MLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
+ + D EM A +E A KR+ +IE E+ + +LPKD ND++++ +EIRAGTGGDE++
Sbjct: 69 LEDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDEAS 128
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
LF DL RMY RF ER W+ EI+ + +E+GGYKEI+ ++ G YSKLKFESGVHRVQ
Sbjct: 129 LFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHRVQ 188
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP TE GRIHTSA TVAV+P+A+++E I I P DL IDTYR+SGAGGQH+N TDSAVR
Sbjct: 189 RVPATEASGRIHTSAATVAVMPQAEDVE-IEIRPEDLDIDTYRSSGAGGQHVNMTDSAVR 247
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKS 305
ITH PTG+VV CQ++RSQ KN+A A+ +L AR+ D +L+++QS A RR +IGS +
Sbjct: 248 ITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEEASTRRGMIGSGDRSE 307
Query: 306 PLNIF 310
+ +
Sbjct: 308 RIRTY 312
>gi|424845384|ref|ZP_18269995.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
gi|363986822|gb|EHM13652.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
Length = 358
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 214/305 (70%), Gaps = 3/305 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L + + +E++ + V +N+K+ ++H+ L P+VEL+ Y+++ + AK
Sbjct: 6 RLAEIEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEYRQVEAGLAEAKS 65
Query: 68 MLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
+ + D EM A +E A KR+ +IE E+ + +LPKD ND++++ +EIRAGTGGDE++
Sbjct: 66 LEDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDEAS 125
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
LF DL RMY RF ER W+ EI+ + +E+GGYKEI+ ++ G YSKLKFESGVHRVQ
Sbjct: 126 LFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHRVQ 185
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP TE GRIHTSA TVAV+P+A+++E I I P DL IDTYR+SGAGGQH+N TDSAVR
Sbjct: 186 RVPATEASGRIHTSAATVAVMPQAEDVE-IEIRPEDLDIDTYRSSGAGGQHVNMTDSAVR 244
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKS 305
ITH PTG+VV CQ++RSQ KN+A A+ +L AR+ D +L+++QS A RR +IGS +
Sbjct: 245 ITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEEASTRRGMIGSGDRSE 304
Query: 306 PLNIF 310
+ +
Sbjct: 305 RIRTY 309
>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
gi|238688639|sp|B1KDU3.1|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
Length = 361
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 215/302 (71%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ V + + + +E+S L +V+ + +++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDPSVIADQERFRALSKEYSQLEDVVKSFTAFQQATE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ AKEMLN D E++ A +E+ AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLEAAKEMLNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY ++SE N W+ E+++ + E GG+KE+IA+I G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEESTRRNLV 300
Query: 299 GS 300
S
Sbjct: 301 SS 302
>gi|421498082|ref|ZP_15945221.1| peptide chain release factor 1 [Aeromonas media WS]
gi|407182902|gb|EKE56820.1| peptide chain release factor 1 [Aeromonas media WS]
Length = 358
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 215/308 (69%), Gaps = 2/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M+ KLE +R +E+ LL + V ++ Y RE++ L IV + +++ E++ T
Sbjct: 1 MIRKLEGLIERHEEVQALLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEENLET 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
K ML +D ++R A +E+ LAK + E ++ ++LP+D D N ++EIRAG GGD
Sbjct: 61 TKMMLEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFESG H
Sbjct: 121 EAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVDGEHVYGRLKFESGGH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE+QGR+HTSACTVAV+PE E E I INP++L+IDT+RASGAGGQH+NKTDS
Sbjct: 181 RVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVNKTDS 240
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+GS
Sbjct: 241 AIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLVGSGD 300
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 301 RSERIRTY 308
>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
gi|189039992|sp|A8H7A5.1|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
Length = 361
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ V + + + +E+S L +V + ++++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDAGVIADQERFRALSKEYSQLEDVVSTFKSFQQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEM+ +D E++ A +E +AK I +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMMEEDDPELKEMAQEEYKVAKSAIAALEDELQILLLPKDPNDDNNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+++ + E GG+KE+IA+I G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 SSGDRSERIRTY 312
>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML DLEMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DLEAAEMMLEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVSGEGVFGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGS 300
>gi|384418010|ref|YP_005627370.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353460924|gb|AEQ95203.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 361
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 215/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V NN + RE S L P+ + +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M D EMR A +EI A+ R+ +++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLSAAEAMRTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+I EAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ D++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSKAAAAQAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|417348737|ref|ZP_12127606.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353574799|gb|EHC37724.1| Peptide chain release factor 1, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
Length = 257
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/250 (59%), Positives = 195/250 (78%)
Query: 51 LYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRN 110
+ +++++ +DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN
Sbjct: 2 CFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERN 61
Query: 111 IFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLN 170
F+E+RAGTGGDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G
Sbjct: 62 AFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDG 121
Query: 171 VYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRAS 230
VY +LKFESG HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+S
Sbjct: 122 VYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSS 181
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNT 290
GAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q
Sbjct: 182 GAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAE 241
Query: 291 AKMRRLLIGS 300
A RR L+GS
Sbjct: 242 ASTRRNLLGS 251
>gi|407894262|ref|ZP_11153292.1| peptide chain release factor 1 [Diplorickettsia massiliensis 20B]
Length = 360
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 219/305 (71%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK +L +L +R +EL LL + N +D K E+ L PIV+ + Y+
Sbjct: 1 MKSSLLKRLTVLLERHEELTALLGDSQTIQDQNRFRDLSK---EYVQLAPIVQSFQRYQA 57
Query: 58 INEDIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ A++ L+D +EMR A +EI K++ +E E+++L++P+D ND RNIF+EI
Sbjct: 58 NVAALNEARQCLDDADIEMRALAEEEIICLKQQQSQLEAELEQLLIPRDPNDSRNIFLEI 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RA GGDE+A+F +L RMY R++E W+ EI++ SE GGYKEI++RI G +VY++L
Sbjct: 118 RAAAGGDEAAIFAGNLFRMYSRYAETQGWQIEILNSHPSEQGGYKEIVSRISGTDVYAQL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP+TE QGR+HTS CTVA++PE + ++++NINP++L+IDT+RASGAGGQ
Sbjct: 178 KFESGAHRVQRVPETEAQGRVHTSTCTVAILPEIEALDEVNINPSELKIDTFRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+ KTDSA+RITHIP+G+VV+CQ++RSQHKN+A A+ +L A++ ++ +QQ A++RR
Sbjct: 238 HVQKTDSAIRITHIPSGLVVECQDERSQHKNRARAMSLLQAKLLSAQQMKQQQEEAQVRR 297
Query: 296 LLIGS 300
L+G+
Sbjct: 298 NLVGT 302
>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 317
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 197/256 (76%)
Query: 45 LYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKD 104
L + + +++++ +DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD
Sbjct: 2 LSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKD 61
Query: 105 KNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIA 164
+D+RN F+E+RAGTGGDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA
Sbjct: 62 PDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIA 121
Query: 165 RIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRI 224
+I G VY +LKFESG HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRI
Sbjct: 122 KISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRI 181
Query: 225 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLR 284
DT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++
Sbjct: 182 DTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETA 241
Query: 285 EQQSNTAKMRRLLIGS 300
++Q A RR L+GS
Sbjct: 242 KRQQAEASTRRNLLGS 257
>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
gi|345891915|ref|ZP_08842743.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
gi|345047775|gb|EGW51634.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
Length = 356
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/308 (50%), Positives = 213/308 (69%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE K+ EL+ L Q +V N+ + Y K + H+ L IV+L+ ++ + +++
Sbjct: 1 MFAKLEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAE 60
Query: 65 AKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
K++L+D ++R+ A +EI A+ + IE +K +LP D D++N +EIRAGTGG+
Sbjct: 61 NKQLLHDEDPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S S SE GGYKEII I G VYS+LKFE+G H
Sbjct: 121 EAALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TETQGRIHTSA TVAV+PEA+E+ D+ I P DLRID YRASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMPEAEEV-DVEIRPEDLRIDIYRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITH+PT VV CQ++RSQHKNKA A+K+L +RI ++ Q S + R+ +GS
Sbjct: 240 AVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
gi|189039991|sp|B0TR27.1|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
Length = 361
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ + + + + +E+S L +V + +Y++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDASIIADQERFRALSKEYSQLEDVVRTFKSYQQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +AKEM+ +D E++ A +E K+ I +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DFESAKEMMEEDDPELKEMAQEEYKATKEAIATLEAELQILLLPKDPNDDNNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E W+ E+++ + E GG+KE+IA+I G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 SSGDRSERIRTY 312
>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
gi|375130242|ref|YP_004992342.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
Length = 362
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V + + +E+S L I + Y++ +
Sbjct: 1 MKASILVKLESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A DEI +AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLSAAEEMAKEDDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKRAAAISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|423195701|ref|ZP_17182284.1| peptide chain release factor 1 [Aeromonas hydrophila SSU]
gi|404633113|gb|EKB29678.1| peptide chain release factor 1 [Aeromonas hydrophila SSU]
Length = 362
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V + Y RE++ L IV + +++ E
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ ++ML +D ++R A +E+ LAK + E ++ ++LP+D D N ++EIRAG
Sbjct: 61 NLEATRQMLEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP+DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417955853|ref|ZP_12598859.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342812140|gb|EGU47155.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 362
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAKEDDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
Length = 361
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 217/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + ++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ A++ +E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DVATAEMMLDDPEMREMAQEELKQARETTETLEQQLQLLLLPKDPDDERSCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGS 300
>gi|440231205|ref|YP_007344998.1| peptide chain release factor 1 [Serratia marcescens FGI94]
gi|440052910|gb|AGB82813.1| peptide chain release factor 1 [Serratia marcescens FGI94]
Length = 361
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 217/300 (72%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + + RE++ L + + ++++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSNCFLQWRQVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML D EMR A +EI AK ++E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLATAEMMLEDPEMREMAQEEIKQAKTVTDELEQQLQLLLLPKDPDDERSCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ E++S + E GGYKE+IA++ G VY LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGEGVYGLLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +INPA L+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPDINPAALKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQLEEASTRRNLLGS 300
>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
Length = 361
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 230/312 (73%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK+ + +KLE S RL+EL+ LLT+ E+ NN + +E++ + PIVE ++ Y++ +E
Sbjct: 1 MKNSIRTKLENLSDRLQELNVLLTEPEIINNQNQFRSLSKEYAEIQPIVECFDKYRQNSE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
TA EML D +MR A +E++ A+ ++ E++ L+LPKD +D N F+E+RAG
Sbjct: 61 TQATAIEMLRDEDADMRALAEEELSQAQTENERLDNELQLLLLPKDPDDNSNTFLEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL+RMY R++E+ W+ EI+S++ E GG+KEII RI G VYS+ KFE
Sbjct: 121 TGGDEAALFAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRITGEGVYSRFKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE +E+E+I IN AD+R DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+TH+PTGIV++CQ++RSQHKN+A A +L AR+ ++ Q++ A+ RR L+
Sbjct: 241 KTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQRAEKAETRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
Length = 362
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + RE+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSREYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
Length = 362
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 228/315 (72%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
MK + KLE ++R +EL LL++ +V N ++Y K E+S L P+V+ + Y+
Sbjct: 1 MKESIKFKLESLAERYEELAALLSEADVIMDQNLFRNYSK---EYSELEPVVKCFEEYQV 57
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ E++ A+ ML +D +++ +E+ ++ + L+++KL+LPKD ND +N+F+E+
Sbjct: 58 VLENLEEAQLMLTDSDPDIKEMGQEELKSGNEQKETLLLDLQKLLLPKDPNDSKNVFLEV 117
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RAGTGGDE+++F DL RMY R++E WK EI+S + E GGYKEIIARI+G YSKL
Sbjct: 118 RAGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARIVGEGAYSKL 177
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP TE+QGRIHTSACTVAV+PE DE+ DI+IN ADLRIDT+RASGAGGQ
Sbjct: 178 KFESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDTFRASGAGGQ 237
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RI H+PTG+VV+CQ++RSQHKN+A A+ +L +R+K ++ + + ++ RR
Sbjct: 238 HVNKTDSAIRIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEEDKAAAEQSETRR 297
Query: 296 LLIGSVQKKSPLNIF 310
L+G+ + + +
Sbjct: 298 SLVGTGDRSDRIRTY 312
>gi|422014436|ref|ZP_16361047.1| peptide chain release factor 1 [Providencia burhodogranariea DSM
19968]
gi|414100880|gb|EKT62489.1| peptide chain release factor 1 [Providencia burhodogranariea DSM
19968]
Length = 360
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + +E++ L + + ++ ++ + +
Sbjct: 1 MKPSIVAKLEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFSAWQTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK R ++E ++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAEMLLDDPEMKEMAQEELKDAKVRNEELEQHLQLLLLPKDPDDEYNCFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY RF+E N W+ E++S S E GG+KE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRFAEANRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI+ +++ ++Q+ A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGSRIRQAEMAKRQAAEATERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
Length = 362
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMANEDDEEMREMAQEEIKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|422022652|ref|ZP_16369159.1| peptide chain release factor 1 [Providencia sneebia DSM 19967]
gi|414095822|gb|EKT57482.1| peptide chain release factor 1 [Providencia sneebia DSM 19967]
Length = 360
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 223/310 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + +E++ L + + ++ ++ + +
Sbjct: 1 MKPSIVAKLEALQERYEEIQAHLADASVIADQDRFRALSKEYAQLMDVAKCFSEWRTVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EM+ A +E+ AK R ++E +++ L+LPKD +D+ N F+EIRAG G
Sbjct: 61 DIETAEMMLSDPEMKEMAQEELKDAKVRNDELEQQLQLLLLPKDPDDEYNCFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY RF+E N WK E++S S E GG+KE+IA+I G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRFAEANRWKVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACT+A++PE E E I+PADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L +RI+ +++ ++ + A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGSRIRQAEMDKRHAAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Bermanella marisrubri]
gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
Length = 363
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 221/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ +R +E+ LL+ V ++ + + +E++ + P+V+ + Y + E
Sbjct: 1 MKESVKVKLQTLDERYEEIGHLLSDAGVISDQNKFRELSKEYAEIEPVVKAFAQYTQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ + +D +MR +E + AK+ I ++ E++ L+LPKD ND +N+ +EIRAG
Sbjct: 61 NLAEAEALAKDDDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E+ WK E++S + E GGYKE+I RI G VY +LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+PE + +D++IN ADLRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ +RSQHKN+A A+ IL R+ D+ +++ Q+ A R+ L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQAAERKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|421493653|ref|ZP_15941008.1| PRFA [Morganella morganii subsp. morganii KT]
gi|455739144|ref|YP_007505410.1| Peptide chain release factor 1 [Morganella morganii subsp. morganii
KT]
gi|400192030|gb|EJO25171.1| PRFA [Morganella morganii subsp. morganii KT]
gi|455420707|gb|AGG31037.1| Peptide chain release factor 1 [Morganella morganii subsp. morganii
KT]
Length = 360
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L +V + + +E++ L + + + ++ I +
Sbjct: 1 MKPSIVAKLEALKERYEEIQAHLADADVIADQNKFRALSKEYAQLTDVAKCFEAWQTIQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK R +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIDTAQMLLDDPEMKEMAQEELKDAKLRNETLEQELQVLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI++ + E GGYKEII R+ G N Y LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRIEIMNSNDGEHGGYKEIIFRVTGENAYGNLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA AL +L ARIK ++ + A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKALSVLAARIKAAEESRRHEAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|411008402|ref|ZP_11384731.1| peptide chain release factor 1 [Aeromonas aquariorum AAK1]
Length = 362
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V + Y RE++ L IV + +++ E
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ ++ML D ++R A +E+ LAK + E ++ ++LP+D D N ++EIRAG
Sbjct: 61 NLEATRQMLEEEDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP+DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|410087768|ref|ZP_11284469.1| Peptide chain release factor 1 [Morganella morganii SC01]
gi|409765762|gb|EKN49865.1| Peptide chain release factor 1 [Morganella morganii SC01]
Length = 360
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L +V + + +E++ L + + + ++ I +
Sbjct: 1 MKPSIVAKLEALKERYEEIQAHLADADVIADQNKFRALSKEYAQLTDVAKCFEAWQTIQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L+D EM+ A +E+ AK R +E E++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMLLDDPEMKEMAQEELKDAKLRNETLEQELQVLLLPKDPDDERNCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI++ + E GGYKEII R+ G N Y LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAESRRWRIEIMNSNDGEHGGYKEIIFRVTGENAYGNLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+ E E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVLAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA AL +L ARIK ++ + A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKALSVLAARIKAAEESRRHEAEASERRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
Length = 360
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTHCFKEWRSMQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML D EMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIDAAEMMLEDPEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKVSGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAVASERRNLLGS 300
>gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
Length = 360
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML DLEMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DLEAAEMMLEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTG+VV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGS 300
>gi|333367667|ref|ZP_08459914.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
Length = 362
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 212/313 (67%), Gaps = 3/313 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ ++ + + EHS L I L+ Y++
Sbjct: 1 MKDSLRERLDQMVDRFEEVTALLSDPGTISDNNKFRELSMEHSELSEITSLWQRYRQAET 60
Query: 61 DIITAKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D A EM+N D EM+ +EI+ A I +E E+ ++LPKD NDK F+EIRA
Sbjct: 61 DKQDALEMINEASDPEMKAMMQEEIDSAADDIAAMEEELNVMMLPKDPNDKVPAFLEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+A+F DL RMY R++ W E++S + E GGYKEII R+ G +VY +LKF
Sbjct: 121 GTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESG HRVQRVP+TE+QGR+HTSACTVAV+PE + + +NPAD+R+DT+R+SGAGGQH+
Sbjct: 181 ESGAHRVQRVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHV 240
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
N TDSAVR+THIPTG+V +CQ +RSQHKN+A A+++L+ARI+ +K++EQ +RR L
Sbjct: 241 NTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRNL 300
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 301 VGSGDRSERIRTY 313
>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
Length = 360
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML D EMR A DE+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLEDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGS 300
>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
gi|166223602|sp|A6WSF0.1|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
Length = 363
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 217/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V ++ + +E++ L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD +D +N F+EIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KE+I ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGEGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERVRTY 312
>gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
gi|119361548|sp|Q2SL95.1|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
Length = 360
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 219/302 (72%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL+ R +E+ LL+ ++ + + + + +E++ L P+V+ Y Y+
Sbjct: 1 MKESIKLKLDLLKDRYEEVGALLSDPDIISVQEKFKELSKEYAELEPVVQCYQEYQNALN 60
Query: 61 DIITAKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +K +LND +MR A +E+ A++ +E +++ L+LP+D D N+F+EIRAG
Sbjct: 61 AIEESKLLLNDSDADMREMAKEELAAAEESSEQLEKDLQILLLPRDPRDGSNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY R++E WK EI+S S E GGYKE+I+R+ G NV++ LKFE
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRVAGDNVFNLLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTVA++PE +E+ D++INPADLR+DTYRASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+GIVV+CQ++RSQHKN+A A+ +L A++ S +Q A+ R+ L+
Sbjct: 241 KTDSAIRITHLPSGIVVECQDERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQAQTRKSLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254790877|sp|B8J4R4.1|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 356
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 212/308 (68%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE K+ EL+ L Q +V N+ Y K + H+ L +VEL+ ++ ++E++
Sbjct: 1 MFAKLEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAE 60
Query: 65 AKEMLND--LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+ +L+D E+R A +E++ + + ++E E+K ++LP D D++N +EIRAGTGG+
Sbjct: 61 NRLLLHDEDPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S S SE GGYKEII I G VYS LKFE+G H
Sbjct: 121 EAALFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE QGRIHTSA TVAV+PEA+E+ D+ I P DLRID YRASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMPEAEEV-DVEIRPEDLRIDIYRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITH+PT VV CQ++RSQHKNKA A+K+L +RI ++ Q S + R+ +GS
Sbjct: 240 AVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQSSELSADRKAQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
Length = 362
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL + ++ + +E+S L I + + Y +
Sbjct: 1 MKSSILVKLETLVERYEEIQHLLGDPGILSDQNKFRALSKEYSQLEDITQCFQAYLGAKD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +E+ +K I +E E++ L++PKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKEDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R++ER W+ E+I+ + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + A RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
Length = 360
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ E
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+DLEMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G + +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTG+VV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+G+
Sbjct: 241 DSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGT 300
>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
gi|386312572|ref|YP_006008737.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
gi|166223604|sp|A4Y3J8.1|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223606|sp|A1RNE1.1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
W3-18-1]
gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
putrefaciens CN-32]
gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
Length = 363
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 210/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAELERLESELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ E++S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQMEVMSCNEGEHGGFKEIIVKVSGEGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166223525|sp|A0KMZ8.1|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 362
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V + Y RE++ L IV + +++ E
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ ++ML +D ++R A +E+ LAK + E ++ ++LP+D D N ++EIRAG
Sbjct: 61 NLDATRQMLEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP++L+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|403049123|ref|ZP_10903607.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86D]
Length = 361
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ML+KLEK +RL E++ LL E ++ +Y +E + L PIVE Y Y + E
Sbjct: 1 MHDSMLAKLEKLKERLSEIEELLIDSETIKDMDNYTLLNKEFADLKPIVEKYQEYNVVLE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A E+L D+++++ A DE+ + + +E E+K ++LPKD D + F+EIRAG
Sbjct: 61 AIDDANEILESGDIDLKSLAEDELKESSGKPEKLEQELKLMLLPKDSADDGSAFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R +ER W ++I +E GG +E++A++ G +V+ LKFE
Sbjct: 121 AGGDEAGIFAGDLYRMYSRLAEREGWSVDVIDIKQAEQGGIREVVAQLNGKSVFKVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGRIHTS CTVA++PE +E++DI I+ DLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRIHTSTCTVAILPEVEEVQDIAIDKNDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIP+G+VV+CQ+ RSQHKNK AL +L +++K ++ QQ + A R++L+
Sbjct: 241 KTDSAVRLTHIPSGLVVECQDGRSQHKNKEKALSLLASKLKQQEIESQQESIASERKILV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSEKIRTY 312
>gi|381393905|ref|ZP_09919623.1| peptide chain release factor 1 [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379330177|dbj|GAB54756.1| peptide chain release factor 1 [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 361
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL + N + +E+S L +V+ + ++
Sbjct: 1 MKDSVIQKLESLVERFEEVQALLGDPSIIGNQDKFRGLSKEYSQLEEVVKQFGEFQGAQR 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
DI +A EM+ D EMR A +E+ AKK IE +++ L+LP+D +D + F+EIRAG
Sbjct: 61 DIASALEMIQEEDAEMREMAQEELKNAKKNSEQIETDLQILLLPRDPDDDNDCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F D+ RMY R++E W+ E++S S + GGYKEIIA+I G Y LKFE
Sbjct: 121 AGGDEAAIFAGDMFRMYSRYAETQGWRLEVMSASEGDHGGYKEIIAQISGNGPYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVAV+P E + I INP+DLR+DTYRASGAGGQH+N
Sbjct: 181 SGGHRVQRVPDTESQGRIHTSACTVAVLPVVPESQAIEINPSDLRVDTYRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIP+G+VV+CQ++RSQHKN+A A+ +L AR+ + + ++ + A R+ L+
Sbjct: 241 KTDSAIRLTHIPSGVVVECQDERSQHKNRARAMSVLQARLNNIEKEKRDAEEASTRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
Length = 362
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + RE+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|398801483|ref|ZP_10560725.1| peptide chain release factor 1 [Pantoea sp. GM01]
gi|398091804|gb|EJL82232.1| peptide chain release factor 1 [Pantoea sp. GM01]
Length = 360
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V + + RE++ L + + ++++ E
Sbjct: 1 MKSSIVAKLEALQERHEEVEALLGDAGVIADQDRFRALSREYAQLSDVTRCFREWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L D EMR A +E+ ++++ ++E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DVETAEMLLEDPEMREMAQEELKTSREKREELEQQLQVLLLPKDPDDERSCFVEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EIIS + E GGYKE+IARI G Y + KFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAEARRWQVEIISANEGEHGGYKEVIARISGDGAYGRFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++ + A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAETAKRNAAEASTRRNLLGS 300
>gi|451971712|ref|ZP_21924929.1| peptide chain release factor 1 [Vibrio alginolyticus E0666]
gi|451932442|gb|EMD80119.1| peptide chain release factor 1 [Vibrio alginolyticus E0666]
Length = 362
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + RE+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM N D EMR A +E+ AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMANEDDEEMREMAQEEVKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|421527728|ref|ZP_15974305.1| peptide chain release factor 1 [Pseudomonas putida S11]
gi|402214810|gb|EJT86130.1| peptide chain release factor 1 [Pseudomonas putida S11]
Length = 792
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 181/224 (80%)
Query: 77 FALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYI 136
A++E+ AK+++ +E ++++++LPKD ND RN+F+EIRAGTGGDE+A+F DL RMY
Sbjct: 1 MAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYS 60
Query: 137 RFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRI 196
R++E+ W+ EI+S + E GGYKEIIAR+ G +VY KLKFESG HRVQRVP+TE+QGRI
Sbjct: 61 RYAEKRGWRLEILSENEGEHGGYKEIIARVEGESVYGKLKFESGAHRVQRVPETESQGRI 120
Query: 197 HTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQ 256
HTSACTVAV+PE DE I INPADLR+DTYRASGAGGQH+NKTDSA+RITH+PTGIVV+
Sbjct: 121 HTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRITHLPTGIVVE 180
Query: 257 CQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
CQ +RSQHKN+A A+ L A++ D + Q+ A R+LL+GS
Sbjct: 181 CQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIATERKLLVGS 224
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 146/234 (62%), Gaps = 6/234 (2%)
Query: 332 EKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIV 391
E+ + ++ +QRR GEP+AYI+G + F+ + L + LIPRP+TELLV+ +
Sbjct: 326 ERIVSSEDAETYAGYLQRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVEAAL 385
Query: 392 KKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNI 451
+ K+L++GTG+GAIA+A+A + ++ A D + A+ +A++N +++L N
Sbjct: 386 ELQPATPAKVLDLGTGTGAIALALA-SDRPAWQVTAVDRVEEAVALAERN-RQRLGLANA 443
Query: 452 PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI 511
++ S+W+++L + F++IV+NPPYI D HL GD+RFEP +AL ++GL +
Sbjct: 444 QVRL--SHWFDSLAGER--FDLIVSNPPYIAAADPHLVAGDVRFEPSSALVAGADGLDDL 499
Query: 512 KEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERVT 565
+ I A +LV G LL+EHGY+Q+ VR LL + GF ++ S DL G ER+T
Sbjct: 500 RVIAAQAPAHLVPGGWLLLEHGYDQAAAVRALLAEQGFIEVASRTDLGGHERIT 553
>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
Length = 361
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 217/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ V ++ + +E+S L +V + +++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQQATE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ AKEML ND E++ A +E+ AK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 DLDAAKEMLSENDPEIKEMAQEEMKDAKSIIVKLEDELQILLLPKDPNDDNNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R+ E N W+ EI++ + E GG+KE+I ++ G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIP+GIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEETTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|308050535|ref|YP_003914101.1| peptide chain release factor 1 (bRF-1) [Ferrimonas balearica DSM
9799]
gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
balearica DSM 9799]
Length = 360
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 237/358 (66%), Gaps = 10/358 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KLE +R +E+ LL + +V + + + +E+S L +V + Y++ E
Sbjct: 1 MKPTVYAKLEGLQERYEEVQALLGEPDVIADQDRFRQLSKEYSQLEAVVNAFLAYQQNQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA EML D EM+ A +E+ A+ + +E E++ L+LPKD ND R+ F+EIRAG G
Sbjct: 61 DIATATEMLADPEMKEMAEEELAEARAQTEALEQELQILLLPKDPNDDRSAFVEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DLLRMY R++E+ W E++S S E GGYKE+IA+ G +VY +LKFESG
Sbjct: 121 GDEAAIFAGDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKFSGDSVYGELKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTV V+PE E E I INPADL++DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG VV+CQ++RSQHKN+A A+ +L AR++ ++ ++++ RR L+ S
Sbjct: 241 DSAVRITHLPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKRKAEETSTRRSLVAS 300
Query: 301 VQKKSPLNIF----------ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQ 348
+ + + N+ L +T + + EL + L + + ++L L +
Sbjct: 301 GDRSERIRTYNYPQGRVSDHRINLTLYRLTEVMEGELSALMQPILQEHQADLLAALAE 358
>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
Length = 355
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 140/293 (47%), Positives = 205/293 (69%), Gaps = 3/293 (1%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L++ + R E++ + ++ +++ + R+++ L P+ +L K E++ E
Sbjct: 7 RLDQIANRFAEIEARMASGQLEG--EEFVQASRDYAELEPVAKLALELKAAREEVAGLDE 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML D EMR+ A +E+ +RI ++E ++ +LP+D D + +EIRAGTGGDE+ALF
Sbjct: 65 MLADPEMRDMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGGDEAALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY RF+ WK E +S S SE+GG+KEI+A + G V++KLKFESGVHRVQRV
Sbjct: 125 AGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHVTGTGVFAKLKFESGVHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+ GRIHTSA TVAV+PE DE+ D+ ++P DL+IDTYRASGAGGQH+N TDSA+RIT
Sbjct: 185 PETESGGRIHTSAATVAVLPEPDEV-DVQVDPGDLKIDTYRASGAGGQHVNTTDSAIRIT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTG+VV CQ+ RSQHKN+ A+++L AR+ + + Q A+ R+ ++GS
Sbjct: 244 HLPTGLVVTCQDGRSQHKNREQAMQVLRARLYEQQRDAAQGAEAEARKAMVGS 296
>gi|388603011|ref|ZP_10161407.1| peptide chain release factor 1 [Vibrio campbellii DS40M4]
Length = 362
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A++M N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEDMANEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSSEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum
SCRI1043]
gi|61214611|sp|Q6D551.1|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum
SCRI1043]
Length = 360
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 219/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + V ++ + RE++ L I + +++ E
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+ ML+D EMR+ A +E+ K I +E E++ L+LPKD +D+R F+E+RAGTG
Sbjct: 61 DQQTAEMMLDDPEMRDMAQEELKEGKAAIEALEQELQVLLLPKDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E++S S E GGYKE+IA+I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+ E E +INP+DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
Length = 360
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL+ +R E+ LL+ + + + RE++ + P+V YN Y+KI +
Sbjct: 1 MKSSILEKLDLLQERYVEVGALLSDPGTIADQNRFRELSREYAEIEPVVNCYNEYRKILD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ +L +D +MR +E+ A++ +ELE++KL+LPKD ND +N+F+EIRAG
Sbjct: 61 NLEEAQVLLKDSDPDMRAMGQEELKSAEEERAPLELELQKLLLPKDPNDDKNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY +++E+ W+ EI+S S SE GGYKE+IARI+G VYS+LKFE
Sbjct: 121 TGGDEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARIVGQGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++PEAD ++ IN ADLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ A R+ L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQDDVAAKEMADERKNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
Length = 360
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/300 (50%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTNCFKEWRSTQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+DLEMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DIEAAEMMLDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G + +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTG+VV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+G+
Sbjct: 241 DSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGT 300
>gi|424862822|ref|ZP_18286735.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86A]
gi|400757443|gb|EJP71654.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86A]
Length = 361
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ML+KL++ R+ E++ LL E +I+ Y + +E S L PIV ++ YKKI +
Sbjct: 1 MHDSMLNKLDQLKNRIAEIETLLVDSETVKDIEKYTQLNKEFSELKPIVAKFDEYKKIIK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A E++ D +++ A D++ + + +E E+K ++LPKD D + ++EIRAG
Sbjct: 61 SIDDANEIIKSGDEDLKLLAEDDLRINIDKPEALEQELKFMLLPKDSADDGSAYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R SER W EI+ SE GG KE++A++ G +V+ LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYTRLSEREGWNLEIMDIKPSEQGGLKEVVAKLNGKSVFKVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGRIHTS CTVAV+PE +E++DI+I+ DLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRIHTSTCTVAVLPEVEEVQDISIDKNDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIP+G+VV+CQ+ RSQHKNK A+ +L A++K ++ +QQ + A R++L+
Sbjct: 241 KTDSAVRLTHIPSGLVVECQDGRSQHKNKEKAMSLLAAKLKQQEIDDQQESIASERKILV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSEKIRTY 312
>gi|334704052|ref|ZP_08519918.1| peptide chain release factor 1 [Aeromonas caviae Ae398]
Length = 362
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ LL + V ++ Y RE++ L IV + +++ E
Sbjct: 1 MNPSLIRKLEGLIERHEEVQALLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ T + ML D ++R A +E+ LAK + E ++ ++LP+D D N ++EIRAG
Sbjct: 61 NLETTRLMLEEEDADLREMAQEELPLAKAAFEEQEQALQVMLLPRDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNEGEHGGYKEVIAKVDGEHVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP++L+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|423205686|ref|ZP_17192242.1| peptide chain release factor 1 [Aeromonas veronii AMC34]
gi|404623077|gb|EKB19929.1| peptide chain release factor 1 [Aeromonas veronii AMC34]
Length = 362
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 219/312 (70%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V ++ + Y RE++ L IV + +++ +
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQERYRALTREYAQLEDIVHAFQRFRQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ T + ML +D ++R A +E+ LAK + +E E++ ++LPKD D N ++EIRAG
Sbjct: 61 DLETTQMMLEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+ER W+ I+S + E GGYKE+IA+I G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INPADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
Length = 362
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL V N + +E+S L + + +Y++ E
Sbjct: 1 MKASILIKLETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A +EI AK I + E++ L++PKD ND+RN F+EIRAG
Sbjct: 61 DLEAAEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY RF+E+ W+ E++S ++SE GG+KE+IA+I G VY +KFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E + I DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAAISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|375264713|ref|YP_005022156.1| peptide chain release factor 1 [Vibrio sp. EJY3]
gi|369840037|gb|AEX21181.1| peptide chain release factor 1 [Vibrio sp. EJY3]
Length = 362
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+I A+EM N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLIAAEEMANEDDEEMREMAQEEIKEAKATIERLADELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
Length = 360
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/300 (51%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ L V + + RE++ L + + ++ + +
Sbjct: 1 MKSSIVAKLEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ ML D EMR A +E+ AK R ++E +++ L+LPKD +D+R+ F+EIRAGTG
Sbjct: 61 DLDAAEMMLEDPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F D+ RMY R++E WK EI+S S E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTGIVV+CQ++RSQHKNKA A+ +L ARI+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGS 300
>gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222]
gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32]
gi|254790907|sp|B7VKH3.1|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222]
gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32]
Length = 362
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL +V N + +E+S L + + +Y++ E
Sbjct: 1 MKASILIKLETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM N D EMR A +EI AK I + E++ L++PKD ND+RN F+EIRAG
Sbjct: 61 DLEAAEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ E++S ++SE GG+KE+IA+I G VY +KFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E + I DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAAISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|378710055|ref|YP_005274949.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|418022167|ref|ZP_12661154.1| Peptide chain release factor 1 [Shewanella baltica OS625]
gi|189039990|sp|A9L2D4.1|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|353538392|gb|EHC07947.1| Peptide chain release factor 1 [Shewanella baltica OS625]
Length = 363
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 214/302 (70%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V ++ + +E++ L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD +D +N F+EIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KE+I ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
gi|345887299|ref|ZP_08838489.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
gi|345041960|gb|EGW46078.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
Length = 356
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 214/298 (71%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE ++ +L+ L V N+ Y K + HS L P+V+++ Y+++ +++
Sbjct: 1 MFAKLESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLAD 60
Query: 65 AKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+E+LND + +R A +EI ++++ ++E ++K L+LP D D++NI +EIRAGTGG+
Sbjct: 61 NQELLNDADPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E+ WK EI+S+S S+ GGYKE+IA I G VYS+LKFESG H
Sbjct: 121 EAALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ D+++ P DLR D YR+SG GGQ +N TDS
Sbjct: 181 RVQRVPATESQGRIHTSAATVAIMPEAEEV-DLDLKPEDLRFDVYRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVR+THIPTG+VV CQ+++SQHKNKA LKIL +R+ K EQ + A RR +G+
Sbjct: 240 AVRVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRLLQMKQDEQNAALADQRRAQVGT 297
>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
Length = 361
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/280 (52%), Positives = 197/280 (70%), Gaps = 2/280 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +KLE ++R E+ LL + + + +E+S L P+ E + +
Sbjct: 1 MKASFRNKLEGLAERHAEIAQLLATPDAAEDADQLRRLSQEYSQLEPVAEAWKAWHDNQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ A+ ML +D E+R A EI + +E E+ + ++PKD +D N+F+EIRAG
Sbjct: 61 ALEEARAMLAEDDPELRAMAEAEIETLADQAEALEAELHRHLIPKDPHDNANVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DLLRMY R++E+ WK EI+S S E GGY+E+IAR+ G YS+LKFE
Sbjct: 121 TGGDEAAIFAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARLAGQGAYSRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSA TVA++PE DE+E +INPADLR+DT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI 278
KTDSAVR+TH+PTGIVV+CQ +RSQHKN+A A+ L AR+
Sbjct: 241 KTDSAVRLTHLPTGIVVECQEERSQHKNRAKAMTYLAARL 280
>gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565]
gi|406678089|ref|ZP_11085268.1| peptide chain release factor 1 [Aeromonas veronii AMC35]
gi|423210612|ref|ZP_17197166.1| peptide chain release factor 1 [Aeromonas veronii AER397]
gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565]
gi|404615583|gb|EKB12553.1| peptide chain release factor 1 [Aeromonas veronii AER397]
gi|404623060|gb|EKB19914.1| peptide chain release factor 1 [Aeromonas veronii AMC35]
Length = 362
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V ++ Y RE++ L IV + Y++ +
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ T + ML +D ++R A +E+ LAK + +E E++ ++LPKD D N ++EIRAG
Sbjct: 61 DLETTQMMLEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+ER W+ I+S + E GGYKE+IA+I G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP+DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|423200738|ref|ZP_17187318.1| peptide chain release factor 1 [Aeromonas veronii AER39]
gi|404619556|gb|EKB16466.1| peptide chain release factor 1 [Aeromonas veronii AER39]
Length = 362
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 218/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + +V ++ Y RE++ L IV + Y++ +
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ T + ML +D ++R A +E+ LAK + +E E++ ++LPKD D N ++EIRAG
Sbjct: 61 DLDTTQMMLEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY RF+ER W+ I+S + E GGYKE+IA+I G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I INP+DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
Length = 360
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 214/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ +L V + + RE++ L + + + +++ +
Sbjct: 1 MKPSIVAKLEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVSQCFRRWQQNQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+EML+D EMR+ A +E+ A+ +E E++ L+LPKD +D+RN ++E+RAGTG
Sbjct: 61 DIAAAEEMLDDPEMRDMAQEELKDARATSEQLEQELQVLLLPKDPDDERNCYLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK EI+S + E GGYKE+IA++IG Y +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKVIGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVA++PE E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI+ ++ A RR L+G+
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARLHQEEASTRRNLLGT 300
>gi|444428527|ref|ZP_21223851.1| peptide chain release factor 1 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238236|gb|ELU49853.1| peptide chain release factor 1 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 362
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEDMANEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSSEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|386339746|ref|YP_006036112.1| Peptide chain release factor 1 [Shewanella baltica OS117]
gi|166223601|sp|A3D0G1.1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790896|sp|B8E815.1|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
baltica OS155]
gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|334862147|gb|AEH12618.1| Peptide chain release factor 1 [Shewanella baltica OS117]
Length = 363
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 215/305 (70%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V ++ + +E++ L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD +D +N F+EIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KE+I ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ D K R + +T RR
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEEST---RR 297
Query: 296 LLIGS 300
L+ S
Sbjct: 298 SLVAS 302
>gi|406938579|gb|EKD71782.1| hypothetical protein ACD_46C00100G0003 [uncultured bacterium]
Length = 360
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 215/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKI-- 58
MK +L+KL+ + R +EL LL+ ++ +++ Y +E+S L P V+++ Y+
Sbjct: 1 MKPAILTKLKNITDRHEELKQLLSDPKIMDDMNRYRDLSKEYSQLQPAVDMFARYQHYLK 60
Query: 59 NEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ + +D EM+ A EI + I +E E+ +LPKD +D NIF+EIRAG
Sbjct: 61 HLEEAKLLLEEDDAEMQQLAKQEIKQVEDDIAAVENELLIFLLPKDPHDDNNIFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL RMY+R++E +K EIIS S E GGYKE+I R+IG YS+ KFE
Sbjct: 121 TGGDEAAIFAGDLCRMYMRYAESQRYKIEIISESHGEHGGYKEVILRVIGQGAYSRFKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE QGRIHTS CTVAV+PE +EI+ I+INP DLRIDT+RASGAGGQH+
Sbjct: 181 SGVHRVQRVPATEAQGRIHTSTCTVAVLPELEEIDSIDINPVDLRIDTFRASGAGGQHVQ 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG VV+CQ++RSQHKN+A A+ +L ARI ++ +QQ A+ RR L+
Sbjct: 241 KTDSAIRITHLPTGTVVECQDERSQHKNRARAMSLLKARILAAEQEKQQKQQAETRRNLV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSERIRTY 312
>gi|373948210|ref|ZP_09608171.1| Peptide chain release factor 1 [Shewanella baltica OS183]
gi|373884810|gb|EHQ13702.1| Peptide chain release factor 1 [Shewanella baltica OS183]
Length = 363
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 214/302 (70%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V ++ + +E++ L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD +D +N F+EIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KE+I ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEETTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
Length = 362
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMANEDDEEMREMAQEEIKEAKDAIERLSDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568]
gi|166977369|sp|A8GDA3.1|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568]
Length = 361
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 215/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE++ L + + ++K+ +
Sbjct: 1 MKPSIVAKLEALQERHEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLEWRKVQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ ML+D EMR A +E+ AK ++E +++ L+LPKD +D+R+ F+E+RAGTG
Sbjct: 61 DLATAEMMLDDPEMREMAQEELKDAKAATEELEQQLQVLLLPKDPDDERDCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ EI+S + E GGYKE+IA++ G V+ +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVFGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+P E E IN DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+G+
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGT 300
>gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4]
gi|119361583|sp|Q4FSV3.1|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
arcticus 273-4]
Length = 362
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 215/314 (68%), Gaps = 5/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ V N+ + + EHS L I L+ NY
Sbjct: 1 MKESLRLRLDQMVDRYEEVTALLSDPSVINDNNKFRELSVEHSDLMDITTLWQNYVGAET 60
Query: 61 DIITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D A+ ML +D +M+ +EI+ A+ I ++E + ++LPKD NDK F+EIRA
Sbjct: 61 DQADAEAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLPKDPNDKVPAFLEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+A+F DL RMY ++++ W E++S + E GGYKEII R+ G +VY +LKF
Sbjct: 121 GTGGDEAAIFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIED-ININPADLRIDTYRASGAGGQH 236
ESGVHRVQRVP TE+QGR+HTSACTVAV+PE EI+D +N+NPAD+R DT+R+SGAGGQH
Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEV-EIDDTVNLNPADIRFDTFRSSGAGGQH 239
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+N TDSAVR+THIPTG VV+CQ +RSQHKN+A A+K+L+++I+ K++ Q +RR
Sbjct: 240 VNTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRD 299
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 300 LVGSGDRSERIRTY 313
>gi|337285924|ref|YP_004625397.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
15286]
gi|335358752|gb|AEH44433.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
15286]
Length = 366
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 212/307 (69%), Gaps = 3/307 (0%)
Query: 6 LSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITA 65
L KL++ KR +EL L V N+ Y + REHS L IVE Y YKK+ +DI
Sbjct: 8 LKKLDEVEKRFEELTAQLGDPAVVNDRDKYTQIAREHSDLSEIVETYRRYKKVLKDIADN 67
Query: 66 KEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + +E + L++PKD ND++NI +EIRAGTGG+E
Sbjct: 68 KELLEDADEEIAKLAREELKELEAEREALEKRLMLLLVPKDPNDEKNIMLEIRAGTGGEE 127
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY R++ER W+ EI+ + + +GG+KEIIA I G YS+LK+ESGVHR
Sbjct: 128 AALFAADLFRMYSRYAERKGWEVEILDVNPTGLGGFKEIIAMIKGKGAYSRLKYESGVHR 187
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQR+P+TE+ GRIHTSA TVAV+PEA+E+ D+ I P DL+IDT RASGAGGQH+NKT+SA
Sbjct: 188 VQRIPETESGGRIHTSAVTVAVLPEAEEV-DVEIRPEDLKIDTMRASGAGGQHVNKTESA 246
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIPTGIVV C N+RSQH+N+A A++IL R+ + KLREQ+ RR +GS +
Sbjct: 247 VRITHIPTGIVVYCANERSQHQNRAKAMQILRTRLYEIKLREQEEKIRAERRSQVGSGDR 306
Query: 304 KSPLNIF 310
+ +
Sbjct: 307 SERIRTY 313
>gi|313672261|ref|YP_004050372.1| peptide chain release factor 1 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 356
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 219/309 (70%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M LE+ ++ EL L V ++IK Y + +EHS L PIVE Y YK + I
Sbjct: 1 MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60
Query: 65 AKEMLNDLEMRNF-ALDEINLA--KKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+ +L D ++ L EI LA K+++ I E+K L+LPKD D++NI+IEIRAGTGG
Sbjct: 61 AEAILKDGGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+ESALF DLLRMYIR++E+ WK EII + + +GGYKE+I + G N YSKLK+E+G
Sbjct: 121 EESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAGG 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQR+P+TE+ GRIHTSACTVAVIPEAD++ D++I+P DLRID YR+SGAGGQH+N TD
Sbjct: 181 HRVQRIPETESSGRIHTSACTVAVIPEADDV-DVHIDPKDLRIDVYRSSGAGGQHVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITHIPTGIVV CQ++RSQ KNK A+K+L ++I + +L Q++ A+ R+ +GS
Sbjct: 240 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQAENRKQQVGSG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
Length = 364
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 209/298 (70%), Gaps = 2/298 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+L++L S+R EL+ LL+ EV NN + +EH+ L+ +V + + Y+K D+
Sbjct: 6 LLNRLFALSERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKADLQA 65
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
A+ M D EM AL+E+ + I ++ +K +LP D D ++ +EIRAGTGGD
Sbjct: 66 AEHMSKEPDREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGD 125
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+A+F DLLRMY+++++ W+ EI+S E GGY+E+IA+I G VY+ LKFESG H
Sbjct: 126 EAAIFAGDLLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAH 185
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TETQGR+HTSA TVAV+P E E I ++P+ LRIDT+RASGAGGQHINKTDS
Sbjct: 186 RVQRVPTTETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDS 245
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
A+R+TH+PTG+VV+CQ++RSQHKNKA AL +L AR+ D++ ++ + A R+ L+GS
Sbjct: 246 AIRVTHLPTGMVVECQDERSQHKNKARALSVLAARLADAERQKAHAEQAATRKALVGS 303
>gi|350530483|ref|ZP_08909424.1| peptide chain release factor 1 [Vibrio rotiferianus DAT722]
Length = 362
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A++M N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEDMANEDDEEMREMAQEEIKEAKEAIERLADELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|424030757|ref|ZP_17770230.1| peptide chain release factor 1 [Vibrio cholerae HENC-01]
gi|424042632|ref|ZP_17780325.1| peptide chain release factor 1 [Vibrio cholerae HENC-02]
gi|408881038|gb|EKM19949.1| peptide chain release factor 1 [Vibrio cholerae HENC-01]
gi|408887922|gb|EKM26411.1| peptide chain release factor 1 [Vibrio cholerae HENC-02]
Length = 362
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A++M N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEDMANEDDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
gi|424045196|ref|ZP_17782762.1| peptide chain release factor 1 [Vibrio cholerae HENC-03]
gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
gi|408886639|gb|EKM25309.1| peptide chain release factor 1 [Vibrio cholerae HENC-03]
Length = 362
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+I A++M N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLIAAEDMANEDDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
Length = 361
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 216/312 (69%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ + + + +E+S L +V + +++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQQATE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ AKEML ND E++ A +E+ AK I +E E++ L+LPKD ND N F+EIRAG
Sbjct: 61 DLDAAKEMLSENDPEIKQMAQEEMKEAKSLIKKLEDELQILLLPKDPNDDNNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R+ E N W+ EI++ + E GG+KEII ++ G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E E I INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIP+GIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEETTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
Length = 362
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 225/313 (71%), Gaps = 4/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK L+ +LE+ +R +E++ LL V K + +E++ L+P+V+ + Y+++ E
Sbjct: 1 MKGLLRQRLEQLGERYEEIEALLADPTVIGEQKQFTALSQEYARLHPVVQALSKYQEM-E 59
Query: 61 DIITAKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
++T+ L+ D E+R A DEI A+ ++ ++ +++ L+LP+D +D++ IF+EIRA
Sbjct: 60 QVLTSTRALSEDPDPEIRALAKDEIRAAQLQLEELGQQLQWLMLPQDPDDEKGIFLEIRA 119
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+ALF DL RMY R++ER W+ EII+ + E GGYKEII+R+ G VYS+LKF
Sbjct: 120 GTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRVEGAGVYSRLKF 179
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESG HRVQRVP TE+QGRIHTSACTVAV+PE ++IE+I A+LR+DT+RASGAGGQH+
Sbjct: 180 ESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDTFRASGAGGQHV 239
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
NKTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L A++ + QQ + RR L
Sbjct: 240 NKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARERERQQQEQSATRRSL 299
Query: 298 IGSVQKKSPLNIF 310
+GS + + +
Sbjct: 300 VGSGDRSERIRTY 312
>gi|383753168|ref|YP_005432071.1| putative peptide chain release factor 1 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381365220|dbj|BAL82048.1| putative peptide chain release factor 1 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 355
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/301 (51%), Positives = 208/301 (69%), Gaps = 8/301 (2%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ + EL+ L++ +V ++ + K +EH+ L PIVE + YK + + I
Sbjct: 1 MLDKLQAVEDKFLELESLISDPDVIADMSRWQKYSKEHASLAPIVEKFREYKDVTKGIEE 60
Query: 65 AKEMLN---DLEMRNFALDEINL--AKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
AK M D EMR F +E+ A+K + D EL I L+LPKD ND +N+ +EIR G
Sbjct: 61 AKAMFEESLDDEMRKFVEEELAELKAQKEVLDAELPI--LLLPKDPNDDKNVIVEIRGGV 118
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GG+E+ALF DL RMY R+ E+ WK EII S +E+GGYKEI + G YSKLK+ES
Sbjct: 119 GGEEAALFAGDLFRMYGRYVEKQGWKMEIIDGSPTELGGYKEISFMVTGFGAYSKLKYES 178
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVP TE+ GRIHTSA TVAV+PEA+++ D++I+P DL ID Y ASGAGGQH+N+
Sbjct: 179 GTHRVQRVPATESGGRIHTSAVTVAVLPEAEDV-DVDIDPKDLHIDLYCASGAGGQHVNR 237
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
T+SA+RITHIPTGIVVQCQ++RSQ KNK A+K+L AR+ D +EQ ++ + RR +G
Sbjct: 238 TESAIRITHIPTGIVVQCQDERSQLKNKDKAMKVLRARLLDKAQQEQMASISADRRSQVG 297
Query: 300 S 300
S
Sbjct: 298 S 298
>gi|410634817|ref|ZP_11345447.1| peptide chain release factor 1 [Glaciecola arctica BSs20135]
gi|410145693|dbj|GAC22314.1| peptide chain release factor 1 [Glaciecola arctica BSs20135]
Length = 361
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL + EV + Y +E+S L +V+ + +++ +
Sbjct: 1 MKQSVQRKLEVLDERYEEVQALLGEAEVIADQDRYRGLTKEYSQLESVVKCFRDFQIAQQ 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +A+EM+ +D EMR A +E +K RI ++ E++ L+LPKD ND+ N F+EIRAG
Sbjct: 61 DFESAQEMMQEDDAEMREMAQEEYKSSKLRIEELTQELQVLLLPKDPNDESNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E+ WK E+++ + + GGYK +IA IIG+ Y +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEKQNWKVELVTANDGDHGGYKVVIANIIGVGSYGIMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTV V+PE E E I IN ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPDTESQGRIHTSACTVVVMPEIPESEAIEINKADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH P+GIVV+CQ++RSQHKN+A A+ IL +R+ + ++Q+ RR L+
Sbjct: 241 KTDSAIRITHNPSGIVVECQDERSQHKNRAKAMAILQSRLTQLEEDKRQAEETSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
Length = 362
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL ++ + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAKEDDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|410447428|ref|ZP_11301524.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
gi|409979703|gb|EKO36461.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
Length = 362
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 219/308 (71%), Gaps = 2/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+++KLE R E+ L ++ +++ + + +E+S + PIV+L+ + ++
Sbjct: 6 IITKLESLRLRSTEIHEALAKEGATDDMAHFTQLNKEYSEITPIVDLFKLLQDAEAELNG 65
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
AKE+L+ D E+ A E+N +++I D+E +K ++LPKD+ D ++EIRAG GGD
Sbjct: 66 AKELLDSTDAELIELAKIEVNSNQEKIADLEKNLKFMLLPKDEADDGAAYLEIRAGAGGD 125
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+A+F DL RMY R SER WK EI++ SE G KE + +I G V+ LKFESGVH
Sbjct: 126 EAAIFAADLFRMYSRLSERQGWKLEIVNTKPSEPSGLKEAVVKINGQGVFKFLKFESGVH 185
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE+QGRIHTS TVA++PE DE++DI I+ ++LR+DTYRASGAGGQH+NKTDS
Sbjct: 186 RVQRVPETESQGRIHTSTVTVAILPEVDEVQDIEIDKSELRVDTYRASGAGGQHVNKTDS 245
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVR+THIPTG+VV+CQ+DRSQHKNKA A+ +L+A++K +++ EQQ++ A R++L+G+
Sbjct: 246 AVRLTHIPTGVVVECQDDRSQHKNKAKAMALLVAKLKQNEIDEQQNSIASERKILVGTGD 305
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 306 RSEKIRTY 313
>gi|374294759|ref|YP_005044950.1| peptide chain release factor 1 (bRF-1) [Clostridium clariflavum DSM
19732]
gi|359824253|gb|AEV67026.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
clariflavum DSM 19732]
Length = 360
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ R +E++ L+ V N +Y K ++EH+ L +V Y YKK+ +DI
Sbjct: 1 MFDKLQAAENRYEEINHKLSDPTVIENQDEYRKLMKEHAELQELVNKYGEYKKLTKDIAE 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
AKE+LN D + R+ E+ A++ + I+ EIK L+LPKD ND++N+ +EIR G GG
Sbjct: 61 AKELLNEKLDKDFRDMVELELKEAEESLERIKKEIKILLLPKDPNDEKNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE++LF DL RMY +++E+ WK EI+ + +EIGG+KE+I I G YSKLKFESGV
Sbjct: 121 DEASLFAGDLFRMYTKYAEKCGWKTEILDSNPNEIGGFKEVIFAIEGNGAYSKLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQR+P+TE GRIHTS TVAV+PE +E+ D+ INP DL+IDT+RASGAGGQHINKT+
Sbjct: 181 HRVQRIPETEANGRIHTSTVTVAVLPEVEEV-DVEINPNDLKIDTFRASGAGGQHINKTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITHIPTGIVV CQ+ RSQHKNK A++IL +++ + +Q S A+ R+ +G+
Sbjct: 240 SAIRITHIPTGIVVTCQDQRSQHKNKDKAMRILRSKLYEMAQEQQNSEIAQARKTQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|343502220|ref|ZP_08740078.1| peptide chain release factor 1 [Vibrio tubiashii ATCC 19109]
gi|418479571|ref|ZP_13048649.1| peptide chain release factor 1 [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342815197|gb|EGU50122.1| peptide chain release factor 1 [Vibrio tubiashii ATCC 19109]
gi|384572839|gb|EIF03347.1| peptide chain release factor 1 [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 362
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAKEDDEEMREMAQEEIKEAKETIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|400287421|ref|ZP_10789453.1| peptide chain release factor 1 [Psychrobacter sp. PAMC 21119]
Length = 363
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 212/314 (67%), Gaps = 5/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ V ++ + + EHS L I L+ NY
Sbjct: 1 MKESLRLRLDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAET 60
Query: 61 DIITAKEMLNDL---EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D A+ ML D +M+ DEI+ A+ I +E + ++LPKD NDK F+EIRA
Sbjct: 61 DQADAEAMLADATDPDMKEMMQDEIDNARDTIIKMEEALNLMMLPKDPNDKVPAFLEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+A+F DL RMY ++++ W +++S S E GGYKEII R+ G +VY +LKF
Sbjct: 121 GTGGDEAAIFSGDLFRMYQKYAQSQGWTLDVLSASEGEHGGYKEIITRVSGNSVYGRLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIED-ININPADLRIDTYRASGAGGQH 236
ESGVHRVQRVP+TE+QGR+HTSACTVAV+PE EI+D + +NPAD+R DT+R+SGAGGQH
Sbjct: 181 ESGVHRVQRVPETESQGRVHTSACTVAVMPEV-EIDDTVELNPADIRFDTFRSSGAGGQH 239
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+N TDSAVR+THIPTG V +CQ +RSQHKN+A A+K+L++RI+ K++ Q MRR
Sbjct: 240 VNTTDSAVRLTHIPTGTVAECQQERSQHKNRAQAMKMLISRIQQVKVQAQVDVADSMRRD 299
Query: 297 LIGSVQKKSPLNIF 310
LIGS + + +
Sbjct: 300 LIGSGDRSERIRTY 313
>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
Length = 358
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 214/298 (71%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+++ +R +EL+ L Q E+ + K + K +EHS L PI+ + ++ + ++I
Sbjct: 3 MFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEIAE 62
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
++ +L D E++ A +EI R+ E+ L+LPKD ND++NI +EIRAGTGG+
Sbjct: 63 SQSLLQDPDPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPNDEKNILLEIRAGTGGE 122
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S++++ IGG+KE+I I G V+S+LK+ESGVH
Sbjct: 123 EAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHRVFSRLKYESGVH 182
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE QGRIHTSA TVAV+PEA+E+ D+ I P DLRID YR+SG GGQH+N TDS
Sbjct: 183 RVQRVPETEAQGRIHTSAVTVAVLPEAEEV-DVEIKPEDLRIDVYRSSGHGGQHVNTTDS 241
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVRITH+PTG+VV CQ+++SQHKNKA A+K+L +R+ D + Q S ++ R+ ++G+
Sbjct: 242 AVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQHSRISEERKTMVGT 299
>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
Length = 363
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 227/312 (72%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + R +EL LL+ E+ N + +E++ L P+V+ + +++ +E
Sbjct: 1 MKESIKLKLENLADRYEELAALLSDAEIIMNQDLFRAYSKEYAELEPVVKCFEEFQENDE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ A+ M+ +D +++ ++E+ ++ R ++ L+++KL+LPKD ND RN+F+E+RAG
Sbjct: 61 NLEEAQLMMTDSDPDIKEMGVEEMKASQIRKEELLLDLQKLLLPKDPNDGRNVFVEVRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+++F DL RMY R++E WK E+IS + E GGYKE+IARI+G YS LKFE
Sbjct: 121 TGGDEASIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARIVGEGAYSLLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE+QGRIHTSACTVA++PE DE + I IN ADLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIPTG+VV+CQ++RSQHKN+A A+ +L +R++ ++ + + ++ R+ L+
Sbjct: 241 KTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEEEKHAAEQSETRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
SSM1]
gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
SSM1]
Length = 355
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 222/308 (72%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KLE+ ++ L L+ + ++ K Y + +EH+ L PIVE Y YKKINEDI
Sbjct: 1 MFHKLEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEE 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
AK++L D E++ A E+ K+++ IE E+K L++PKD D++NI++EIRAGTGGD
Sbjct: 61 AKQILESGDKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ LF DLLRMY+R++E++ WK EI+ + + +GGYKE++ I G YS+LKFE G H
Sbjct: 121 EATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGGGH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQR+P TE+ GRIHTSACTVAV+PEAD++E + I+P+DLRID +RASGAGGQH+N TDS
Sbjct: 181 RVQRIPVTESGGRIHTSACTVAVLPEADDVE-VEIDPSDLRIDVFRASGAGGQHVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTGIVV CQ++RSQ KNK A+K+L A+I + ++R+QQ A R+L +GS
Sbjct: 240 AVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQEAIASNRKLQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|424807401|ref|ZP_18232809.1| peptide chain release factor 1 [Vibrio mimicus SX-4]
gi|342325343|gb|EGU21123.1| peptide chain release factor 1 [Vibrio mimicus SX-4]
Length = 388
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 212/338 (62%), Gaps = 28/338 (8%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIIS--------------------------RS 152
GGDE+ +F DL RMY RF+E+ W+ E++S S
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSGIFAGDLFRMSSRFAEKKGWRIEVMSSS 180
Query: 153 LSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEI 212
+E GGYKE+IA++ G Y LKFESG HRVQRVP TE QGRIHTSACTVAV+PE E
Sbjct: 181 EAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEA 240
Query: 213 EDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALK 272
E I +DL+IDT+R+SGAGGQH+N TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+
Sbjct: 241 EIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMS 300
Query: 273 ILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+L ARI ++ ++ + + RR L+GS + + +
Sbjct: 301 VLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRTY 338
>gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 361
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KLE ++R +EL LL+ +V NN + RE S L P+ + +
Sbjct: 1 MTPTLRRKLEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDETRAKA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+ M +D EMR A +EI A+ R+ +++ ++ L++P+D D N+F+E+RAGTG
Sbjct: 61 DLAAAEAMRSDPEMRELAEEEIAAAQARLEELDAQLALLLVPRDPRDDGNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++ER WK EI S S E GGYKE++AR++G YS+LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSA TVA+IPEAD++E+I INPADL++DT+R+SGAGGQH+NKT
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+P+G+VV+CQ +RSQH N+ A+K L A++ +++ + + A+ R+L +GS
Sbjct: 241 ESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSKAAAAEAQTRKLQVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSQRIRTY 310
>gi|343510411|ref|ZP_08747644.1| peptide chain release factor 1 [Vibrio scophthalmi LMG 19158]
gi|342802324|gb|EGU37758.1| peptide chain release factor 1 [Vibrio scophthalmi LMG 19158]
Length = 362
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPGVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKEDDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVTGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+++L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|386325949|ref|YP_006022066.1| Peptide chain release factor 1 [Shewanella baltica BA175]
gi|333820094|gb|AEG12760.1| Peptide chain release factor 1 [Shewanella baltica BA175]
Length = 363
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 214/305 (70%), Gaps = 8/305 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E++ L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVMALLGDASVILDQDRFRALSKEYAQLEDVVAGFKAYQQAQV 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +E+ AK ++ +E E++ L+LPKD +D +N F+EIRAG
Sbjct: 61 DLDSAKEMLEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KE+I ++ G VY KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK---DSKLREQQSNTAKMRR 295
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ D K R + +T RR
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEEST---RR 297
Query: 296 LLIGS 300
L+ S
Sbjct: 298 SLVAS 302
>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
gi|417949871|ref|ZP_12593001.1| peptide chain release factor 1 [Vibrio splendidus ATCC 33789]
gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
gi|342807595|gb|EGU42781.1| peptide chain release factor 1 [Vibrio splendidus ATCC 33789]
Length = 362
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KLE +R +E+ LL +V + + +E+S L + + + Y++ +
Sbjct: 1 MKASILVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M +D EMR A +EI AK+ I + E++ L+LPKD ND+RN F+EIRAG
Sbjct: 61 DLEAAEDMAQEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ E++S + SE GGYKE+IA++ G VY +KFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4]
gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4]
Length = 362
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M N D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEDMANEDDEEMREMAQEEIKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACT+AV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
gi|166223617|sp|A7MY68.1|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
Length = 362
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V N + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A++M N D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEDMANEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5]
gi|119361584|sp|Q1QAW3.1|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
cryohalolentis K5]
Length = 362
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 216/314 (68%), Gaps = 5/314 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +L++ R +E+ LL+ V ++ + + EHS L I L+ NY +
Sbjct: 1 MKESLRLRLDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAEK 60
Query: 61 DIITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
D A+ ML +D +M+ +EI+ A+ I ++E + ++LPKD NDK F+EIRA
Sbjct: 61 DQADAEAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNLMMLPKDPNDKVPAFLEIRA 120
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGGDE+A+F DL RMY +F++ W EI+S + E GGYKEII R+ G +VY +LKF
Sbjct: 121 GTGGDEAAIFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKF 180
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIED-ININPADLRIDTYRASGAGGQH 236
ESGVHRVQRVP TE+QGR+HTSACTVAV+PE EI+D +++NPAD+R DT+R+SGAGGQH
Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEV-EIDDTVDLNPADIRFDTFRSSGAGGQH 239
Query: 237 INKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRL 296
+N TDSAVR+THIPTG VV+CQ +RSQHKN+A A+K+L+++I+ K++ Q +RR
Sbjct: 240 VNTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRD 299
Query: 297 LIGSVQKKSPLNIF 310
L+GS + + +
Sbjct: 300 LVGSGDRSERIRTY 313
>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
PHE/MN1-00]
gi|442555263|ref|YP_007365088.1| peptide chain release factor 1 [Lawsonia intracellularis N343]
gi|119361555|sp|Q1MSG7.1|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
PHE/MN1-00]
gi|441492710|gb|AGC49404.1| peptide chain release factor 1 [Lawsonia intracellularis N343]
Length = 359
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 216/298 (72%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE ++ E++ L Q + N+ + Y K + HS L PIV + +KK+ + +
Sbjct: 1 MFAKLENLEQKFIEIECSLAQPNIFNDQEQYRKLTKTHSDLKPIVTTFQQFKKLQQQLSE 60
Query: 65 AKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KE+++D++ ++ AL+EI + + +E E+K L+LPKD D++NI +EIRAGTGG+
Sbjct: 61 NKELISDIDPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E+ +WK EI+S+S S+ GG+KEIIA I G NVYS+LKFESG H
Sbjct: 121 EAALFAADLFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVAV+PEA+++ DI I P +LR D +R+SG GGQ +N TDS
Sbjct: 181 RVQRVPTTESQGRIHTSAATVAVLPEAEDV-DIEIRPEELRFDVFRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVR+THIPTGIVV CQ+++SQHKNKA ALK+L +R+ K +Q+ A RR L+GS
Sbjct: 240 AVRVTHIPTGIVVTCQDEKSQHKNKAKALKVLSSRLLQIKQEQQEIEQADARRALVGS 297
>gi|410613072|ref|ZP_11324140.1| peptide chain release factor 1 [Glaciecola psychrophila 170]
gi|410167214|dbj|GAC38029.1| peptide chain release factor 1 [Glaciecola psychrophila 170]
Length = 361
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL++ EV + Y +E+S L +V+ + +++ +
Sbjct: 1 MKESVQRKLEVLDERYEEVQALLSEAEVIADQDRYRGLTKEYSQLEGVVKCFRDFQGAQK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D +A+EM+ +D EMR A +E AK+ I + E++ L+LPKD ND+ N F+EIRAG
Sbjct: 61 DFESAQEMMQEDDAEMREMAQEEYKSAKQSIEEFTQELQVLLLPKDPNDESNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E+ WK E+++ + + GGYK +IA I+G Y +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEKQGWKVELVTANEGDHGGYKVVIANILGDGSYGLMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTV V+PE E E I IN ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPDTESQGRIHTSACTVVVMPEIPESEAIEINKADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH P+GIVV+CQ++RSQHKN+A A+ IL +R+ + ++Q+ RR L+
Sbjct: 241 KTDSAIRITHNPSGIVVECQDERSQHKNRAKAMAILQSRLNQLEEDKRQAEETSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
Length = 325
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEEMAKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|343517491|ref|ZP_08754493.1| peptide chain release factor 1 [Vibrio sp. N418]
gi|342793269|gb|EGU29072.1| peptide chain release factor 1 [Vibrio sp. N418]
Length = 362
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPGVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKEDDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+++L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 362
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI A++ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAKEDDAEMREMAQEEIKEAQETIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +F+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVA++ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEAKRAAEESDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|343505037|ref|ZP_08742687.1| peptide chain release factor 1 [Vibrio ichthyoenteri ATCC 700023]
gi|342809079|gb|EGU44205.1| peptide chain release factor 1 [Vibrio ichthyoenteri ATCC 700023]
Length = 362
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL V + + +E+S L + + + Y++ E
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPGVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKEDDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY +F+E+ W+ E++S + SE GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+++L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
gi|166223578|sp|A6Q162.1|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
Length = 354
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 153/297 (51%), Positives = 211/297 (71%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL F +R E++ LL+ E+ +IK +E S + PIVE Y I E I
Sbjct: 1 MLKEKLHPFIQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIE 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
+ ++ D E+ A +E+ + + +E EIK L++ KD ND+++I++EIRAGTGG+E
Sbjct: 61 ENRSLIEDEELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGTGGEE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF +DL + Y R++E+ W+ EI+S S S+ GGYKEIIA+I G VYS+LK+E+G HR
Sbjct: 121 AALFASDLFKAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++ D+ INP DL+ID YR+SG GGQ +N TDSA
Sbjct: 181 VQRVPETESQGRIHTSAVTVAIMPEVDDV-DVEINPNDLKIDVYRSSGHGGQSVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITHIPTGIVV Q+++SQHKNK ALKIL ARI + ++REQQ AK R+ +GS
Sbjct: 240 VRITHIPTGIVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQEALAKDRKEQVGS 296
>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418361594|ref|ZP_12962246.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|166223526|sp|A4SK64.1|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687180|gb|EHI51765.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 362
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KLE +R +E+ +L + V ++ Y RE++ L IV + +++ E
Sbjct: 1 MNPSLIRKLEGLIERHEEVQAMLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ K ML +D ++R A +E+ LAK + + E ++ ++LP+D D N ++EIRAG
Sbjct: 61 NLEATKLMLEEDDADLREMAQEELPLAKSTLEEQEQALQVMLLPRDPKDDNNCYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++ER W+ I+S + E GGYKE+IA++ G +VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIAKVDGEHVYGRLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+PE E E I IN DL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+PTG+VV+CQ++RSQHKN+A A+ +L AR++ ++ ++ RR L+
Sbjct: 241 KTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
Length = 361
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 213/300 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL V + RE++ L + + +++I
Sbjct: 1 MKPSIVAKLEALQERYEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLKWRQIQG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ M +D EMR A +E+ AK ++E +++ L+LPKD +D+ F+E+RAGTG
Sbjct: 61 DLATAEMMQDDPEMREMAQEELKQAKATTKELEQQLQVLLLPKDPDDEGGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E W+ E+IS + E GGYKE+IA++ G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKVSGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E +I +DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI+ +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGS 300
>gi|328952115|ref|YP_004369449.1| peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
Length = 357
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 215/300 (71%), Gaps = 4/300 (1%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
+++ +L R EL+ L++ E N + Y + REH+ L P+++++ ++++ +
Sbjct: 1 MLIERLHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECD 60
Query: 64 TAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ +L D E++ A +EI K+R+ +E E++ L+LPKD ND +NI +EIRAGTG
Sbjct: 61 NNQALLKTETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF +L RMY RF+E++ WK EI+S + + IGG KEIIA I G VYS LK+ESG
Sbjct: 121 GEEAALFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP TE+QGRIHTSA TVA++PEA+++ D+ I+P +LRID +R+SG GGQ +N T
Sbjct: 181 VHRVQRVPTTESQGRIHTSAVTVAILPEAEDV-DVQISPEELRIDVFRSSGPGGQSVNTT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV CQ+++SQHKNKA ALK+L AR+ D K +EQ A+ R+ +GS
Sbjct: 240 DSAVRITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDIKQQEQHQKMAQDRKSQVGS 299
>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
2210633]
gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
gi|433657015|ref|YP_007274394.1| Peptide chain release factor 1 [Vibrio parahaemolyticus BB22OP]
gi|31076863|sp|Q87RN4.1|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
2210633]
gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
gi|432507703|gb|AGB09220.1| Peptide chain release factor 1 [Vibrio parahaemolyticus BB22OP]
Length = 362
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEEMAKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|417320522|ref|ZP_12107068.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
Length = 362
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KLE +R +E+ LL +V + + +E+S L + + + Y++ +
Sbjct: 1 MKASILTKLETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLAAAEEMAKEDDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
gi|166223612|sp|A6Q6B4.1|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
Length = 355
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 215/303 (70%), Gaps = 1/303 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL+ F R E+ LL+ ++ ++I + +E S L P+VE N Y + + I KE
Sbjct: 5 KLQPFIDRYNEISELLSSPDIASDINRMTELSKEQSGLAPLVEKANLYIETADAIAENKE 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
+L+D E+ + A +E++ + + +E EIK L++PKDKND +NIF+E+RAG GGDESALF
Sbjct: 65 LLSDEELGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGAGGDESALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
V D+ RMY R++E+ WK EI+S + GGYKE+IA I G VYS+LK+E+G HRVQRV
Sbjct: 125 VADVFRMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEAGTHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TETQGR+HTSA TVAVIPE D++E ++I P ++++D YR+SG GGQ +N TDSAVR+T
Sbjct: 185 PDTETQGRVHTSAITVAVIPEVDDVE-VDIKPNEVKMDVYRSSGCGGQSVNTTDSAVRLT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
HIPTGIVV Q+++SQHKN+ A+K+L AR+ +S+L++Q TA R+L +GS + +
Sbjct: 244 HIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYESELQKQLDETAGQRKLQVGSGDRSEKI 303
Query: 308 NIF 310
+
Sbjct: 304 RTY 306
>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
gi|166977370|sp|A0LIZ8.1|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
fumaroxidans MPOB]
Length = 355
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/299 (50%), Positives = 212/299 (70%), Gaps = 4/299 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +LE +++ ++L+ L+ E+ N K+Y K REH+ + PIVE Y YK ++ ++
Sbjct: 1 MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60
Query: 65 AKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
+++L D EMR EI K++I D E +K ++ P+D ND +N+ +EIRAGTGG
Sbjct: 61 NQQLLEQETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALFV+DL RMY R++E WK EI+ + IGG KE+IA + G YS+LKFE GV
Sbjct: 121 EEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFERGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+QGRIHTSA TVAV+PEA+E+ D+ I+P DLR+D +R+SG GGQ +N TD
Sbjct: 181 HRVQRVPVTESQGRIHTSAVTVAVLPEAEEV-DVYIDPNDLRVDVFRSSGPGGQSVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SAVR+THIP+G+VV CQ+++SQHKNKA ALK+L AR+ D EQ++ A+ R+ +G+
Sbjct: 240 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARLLDQMQSEQEARIARDRKSQVGT 298
>gi|343494118|ref|ZP_08732391.1| peptide chain release factor 1 [Vibrio nigripulchritudo ATCC 27043]
gi|342825446|gb|EGU59934.1| peptide chain release factor 1 [Vibrio nigripulchritudo ATCC 27043]
Length = 362
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L+KL+ +R +E+ LL E+ + + +E+S L + + + +Y++ +
Sbjct: 1 MKSSILTKLQTLVERYEEVQHLLGDPEIIGDQDKFRALSKEYSQLEEVTKCFQSYQQAQD 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+EM +D EMR A +EI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLEAAEEMAKEDDAEMREMAQEEIKEAKASIERLADELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY +++E+ W+ E+++ + SE GGYKE+IA+++G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSKYAEKRGWRVEVVNSNESEHGGYKEMIAKVVGDGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVA++ E E E I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ ++ + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEAKRAEEESTTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114]
gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
gi|423685497|ref|ZP_17660305.1| peptide chain release factor 1 [Vibrio fischeri SR5]
gi|75431754|sp|Q5E6T3.1|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238690273|sp|B5FBX0.1|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114]
gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
gi|371495409|gb|EHN71005.1| peptide chain release factor 1 [Vibrio fischeri SR5]
Length = 362
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL +V + + RE+S L + + + Y++ E
Sbjct: 1 MKASIRVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A +EI AK+ I + E++ L+LPKD ND+RN F+EIRAG
Sbjct: 61 DLVAAQEMAQEDDEEMREMAQEEIKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY RF+E+ W+ E++S + +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSRFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTVAV+ E E + I ADL+IDT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAAVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
R551-3]
gi|238693440|sp|B4SKS8.1|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
R551-3]
Length = 360
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 198/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE + L PI + + D+ A+ M D ++R A +EI A+ R+ ++E E+ L
Sbjct: 40 REFAQLEPIATALADETRAKADLAAAEGMRADPDLRELADEEIAAAQARLQELEQELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++P+D D N+F+E+RAGTGGDE+A+F DL RMY R++ER WK EI S + E GGY
Sbjct: 100 LVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGY 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++AR++G +S+LKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADE++DI INP
Sbjct: 160 KEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADLR+DT+R+SGAGGQH+NKT+SA+RITH+PTG+VV+CQ +RSQH N+ A+K L A++
Sbjct: 220 ADLRVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ + Q + A+ RRL +GS + + +
Sbjct: 280 DAERQRQDAAQAESRRLQVGSGDRSQRIRTY 310
>gi|334128801|ref|ZP_08502680.1| peptide chain release factor RF1 [Centipeda periodontii DSM 2778]
gi|333386213|gb|EGK57431.1| peptide chain release factor RF1 [Centipeda periodontii DSM 2778]
Length = 354
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/308 (48%), Positives = 213/308 (69%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL + + EL+ LL+ +V +++ + + REH+ L PI+E Y+ YK+ I
Sbjct: 1 MLSKLNAVADKYHELEALLSDPDVMADMEKWQRYTREHAALTPIIEAYDAYKQALRTIEE 60
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEML D+EM+ ++EI A+ R + E+ L+LP+D ND +N+ +EIR G GG+
Sbjct: 61 DKEMLAEADVEMKEMLVEEIAEAEARRDQLAEELPILLLPRDPNDDKNVIVEIRGGVGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF L RMY R++ER W+ EI+S + +EIGG+KEI + G YS+LK+ESG H
Sbjct: 121 EAALFAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLVSGAGAYSRLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQR+P TE+ GRIHTSA TVAV+PEA+E+E + I+P +LRIDTY ASGAGGQ++N+T++
Sbjct: 181 RVQRIPVTESGGRIHTSAVTVAVLPEAEEVE-VTIDPNELRIDTYCASGAGGQYVNRTET 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+RITHIPTGIVVQCQ+++SQ KN+ A+K+L AR+ D +EQ A RR +GS
Sbjct: 240 AIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQEQADAVAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
gi|119361527|sp|Q47Y94.1|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
Length = 362
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/284 (50%), Positives = 200/284 (70%), Gaps = 2/284 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ ++ + + +E L + ++NNYK +
Sbjct: 1 MKSSVYQKLEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAED 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D TA+ ML +D +MR A +E AKK + DI E++ L+LP+D ND N F+EIRAG
Sbjct: 61 DFSTAELMLKDDDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E+ WK E+++ + SE GGYKE+I ++ G V+ +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTV V+PE E + I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSK 282
KTDSA+RITHIPTG+VV+CQ RSQHKN+A A+ +L AR++ ++
Sbjct: 241 KTDSAIRITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAE 284
>gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium
HF0770_09E07]
Length = 359
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 216/310 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + L+ K+ +L L+ ++ ++I K +E+S + +VE +N Y+++
Sbjct: 1 MKQAIRDSLDSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
I + D EM++ AL+E + +K + IE EI +LPKDK+D+RN F+E+RAG G
Sbjct: 61 SIEDLDTLAKDEEMKSLALEEKDQNEKELEKIEAEIMIQLLPKDKDDERNSFVELRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+FV DL RMY RF+ER+ WK E I S GG+KEI+ ++IG + Y LKFESG
Sbjct: 121 GDEAAIFVGDLYRMYGRFAERSKWKVEKIKEIPSGTGGFKEIVIKVIGADTYGNLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP TE+QGRIHTS TVAV+PE D+IE+ +++ +++R+DTYRASGAGGQH+NKT
Sbjct: 181 VHRVQRVPLTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+P+GIVV+CQ+DRSQHKNKA AL +L ++I D + ++ + A R+ L+G+
Sbjct: 241 DSAVRLTHLPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQEKASERKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSEKIRTY 310
>gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str.
'morsitans']
gi|119361611|sp|Q2NRS4.1|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str.
'morsitans']
Length = 360
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 217/310 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E++ LL V ++ + +E++ L + + ++ ++ E
Sbjct: 1 MKSSIVAKLEALQERREEVEVLLGDPGVISDQIRFRALSKEYAQLSDVTRCFQHWWQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ +L D EMR+ A +E+ + + +E +++ L+LP+D +D+R F+E+RAGTG
Sbjct: 61 DIHTAEHLLQDPEMRDMAQEELLASGASLEQLEQQLQVLLLPRDPDDERGCFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E WK EI+S S E GG+KE+IA++ Y LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKVSHEGAYGLLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PE E E IN DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ++RSQHKNKA AL +L AR++ ++++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRRQQEESSTRRNLLGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
17244]
gi|169259411|gb|EDS73377.1| peptide chain release factor 1 [Anaerofustis stercorihominis DSM
17244]
Length = 355
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ KR E+ ++ ++ NN + Y + ++EHS L PIV Y Y + E + +
Sbjct: 1 MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60
Query: 65 AKEMLNDLEMRNFA---LDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
KEMLND + +F L++I+ ++ +E EIK L++PKD ND +N+ +EIRAG GG
Sbjct: 61 NKEMLNDSDDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ALF DLLRMY R++ERN WK E++S + IGGYKE + I G YS+LK+ESG
Sbjct: 121 DEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGT 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQR+P TE+ GRIHTSA TVAV+PEA+++E +NI+P DLRID YR+SG GGQ +N TD
Sbjct: 181 HRVQRIPDTESSGRIHTSAITVAVLPEAEDVE-VNIDPNDLRIDVYRSSGNGGQSVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITHIP+G+VV CQ+++SQ KNK ALKIL AR+ + + R+QQ A R+ IGS
Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEAIASNRKSQIGSG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|119361510|sp|Q492V8.1|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 360
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 233/358 (65%), Gaps = 10/358 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++++KL +R L+ LL++ ++ K +C +EH+ L IV + + I +
Sbjct: 1 MNSIIVNKLIALQERFNVLEKLLSKPNAIDDKKHFCTLAKEHARLSEIVVCFERWLDIKQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+II K++L D++M + A DE+ +IE +K L+LP D NDK FIE+RAGTG
Sbjct: 61 EIINTKKLLEDVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+A+F +L RMY+R+SE WK EII+ + E GGYKEIIA+I YS LKFESG
Sbjct: 121 GKEAAIFTGELFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TE+QGRIHTS CT+AVIPE +IE +I+P DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRIPHTESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+P+G+VV+CQ++RSQHKNKA AL +L +R+ +++ +Q + RR L+G+
Sbjct: 241 DSAIRITHVPSGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQEVSCTRRNLLGT 300
Query: 301 VQKKSPLNI--FETNILLKYVTRLSDVEL--IINNEKKL------HKQEINILNKLIQ 348
+ + F+ + + + +L I+N E L H+ + + LNKL++
Sbjct: 301 GDRSDRIRTYNFQQGRITDHRISFTSYKLNEIMNGELDLLIQPIIHQHQSDQLNKLLE 358
>gi|440509922|ref|YP_007347358.1| peptide chain release factor 1 [Candidatus Blochmannia chromaiodes
str. 640]
gi|440454135|gb|AGC03627.1| peptide chain release factor 1 [Candidatus Blochmannia chromaiodes
str. 640]
Length = 360
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 238/358 (66%), Gaps = 10/358 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++++KL +R L+ LL++ ++ K +C V+EH+ L IV + + I +
Sbjct: 1 MNSIIVNKLIALQERFNVLEKLLSKPNAIDDKKHFCTLVKEHARLSEIVVCFERWLDIKQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+II K++L D++M + A DE+ +IE +K L+LP D NDK FIE+RAGTG
Sbjct: 61 EIINTKKLLEDVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+A+F +L RMY+R+SE WK EII+ + E GGYKEIIA+I YS LKFESG
Sbjct: 121 GKEAAIFTGELFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TE+QGRIHTS CT+AVIPE +IE +I+P DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRIPHTESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+P+G+VV+CQ++RSQHKNKA AL +L +R+ +++ +Q + RR L+G+
Sbjct: 241 DSAIRITHVPSGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQEVSYTRRNLLGT 300
Query: 301 VQKKSPLNIFE------TNILLKYVT-RLSDV---ELIINNEKKLHKQEINILNKLIQ 348
+ + + T+ + + + +L+++ EL I + +H+ + + LNKL++
Sbjct: 301 GDRSDRIRTYNFQQGRITDHRISFTSYKLNEIMNGELDILIQPIIHQHQSDQLNKLLE 358
>gi|333980787|ref|YP_004518732.1| peptide chain release factor 1 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824268|gb|AEG16931.1| Peptide chain release factor 1 [Desulfotomaculum kuznetsovii DSM
6115]
Length = 357
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 213/309 (68%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ +R +EL L+ EV N+ + + V+ H+ L IVE+Y YKK+ DI
Sbjct: 1 MLDKLDSLEQRYEELSNLIADPEVINDRSRWQQYVKAHAELEEIVEVYREYKKVCRDIRE 60
Query: 65 AKEMLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
AKE+L + + R E+ +++ ++E ++K L+LP+D ND++N+ +EIRAGTGG
Sbjct: 61 AKELLREKLEPDFRELVETELEAQEEKKGELEHKLKVLLLPRDPNDEKNVIMEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL RMY R++ER WK ++++ S +++GG KE+I I G YSKLKFESGV
Sbjct: 121 EEAALFAADLFRMYTRYAERQGWKIDLMNTSYTDLGGIKEVIFLIEGRGAYSKLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTSA TVAV+PEA+E+ D+ INP DLRID + ++G GGQ +N T
Sbjct: 181 HRVQRVPTTESGGRIHTSAATVAVLPEAEEV-DVEINPNDLRIDVFCSTGPGGQSVNTTQ 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+PTGIVV CQ+++SQHKNK A+++L AR+ D EQQ A RR ++G+
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQHKNKEKAMRVLRARLLDRLQEEQQQKIASARRSMVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|444336071|ref|ZP_21150664.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|443548771|gb|ELT57931.1| peptide chain release factor 1 [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 340
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 203/275 (73%), Gaps = 7/275 (2%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
+E++ L +V+ +N + ++N ++ A+ +L+D EM+ A EI +K + +E ++ L
Sbjct: 19 KEYAQLEDVVKSFNRWNQLNSNLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQYLQIL 78
Query: 100 ILPK-DKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGG 158
+LPK D ND+ N ++EIRAGTGGDE+ +F DL RMY R++E W+ E++S + SE GG
Sbjct: 79 LLPKEDPNDEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGG 138
Query: 159 YKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININ 218
+KEIIA + G VY +LKFESG HRVQRVPKTE+QGRIHTSACTVAV+PE E E IN
Sbjct: 139 FKEIIALVSGDGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN 198
Query: 219 PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI 278
PADLRIDTYRASGAGGQHINKTDSAVRITHIPTG+VV+CQ++RSQHKNKA AL +L +R+
Sbjct: 199 PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRL 258
Query: 279 ---KDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ KL ++Q++T RR L+GS + + +
Sbjct: 259 VQQEQEKLAQEQADT---RRNLLGSGDRSDKIRTY 290
>gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 288
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 199/267 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + RE++ L + + +++++ +
Sbjct: 22 MKPSIVAKLEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQD 81
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 82 DIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 141
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 142 GDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESG 201
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 202 GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT 261
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNK 267
DSA+RITH+PTGIVV+CQ++RSQHKNK
Sbjct: 262 DSAIRITHLPTGIVVECQDERSQHKNK 288
>gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259585226|sp|C4K7Y8.1|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 360
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 207/300 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +EL L + + + RE++ L I EL+ + K+
Sbjct: 1 MKPSFIKKLEALQERHEELQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWLKLQN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+I AK +L D EM A +E+ AK + + +++ L+LPKD +D R+ F+EIRAGTG
Sbjct: 61 DMIAAKSLLQDPEMHEMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY R++E WK EIIS E GGYKE+I +I G VY +LKFESG
Sbjct: 121 GDEAAIFAGDLFRMYARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE E E I +DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPTTESQGRIHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L AR+ ++++++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQASERRNLLGS 300
>gi|386285700|ref|ZP_10062914.1| peptide chain release factor 1 [Sulfurovum sp. AR]
gi|385343408|gb|EIF50130.1| peptide chain release factor 1 [Sulfurovum sp. AR]
Length = 355
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 217/303 (71%), Gaps = 1/303 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL+ F R E+ LL+ ++ ++IK + +E S L +VE N Y + +E I KE
Sbjct: 5 KLQPFIDRYNEISQLLSSPDIASDIKRMTELSKEQSDLSALVEKANLYVETSEAIDENKE 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
+L D E+ + A +E++ + + +E EIK L++PKDKND +NIF+E+RAG GGDESALF
Sbjct: 65 LLGDAELGDLAKEELSELEPMLPVLEEEIKVLMIPKDKNDDKNIFLELRAGAGGDESALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
V D+ +MY R++E+ WK EI+S + GGYKE+IA+I G +VYSKLK+E+G HRVQRV
Sbjct: 125 VADVFKMYSRYAEQMGWKIEIVSTNEGTSGGYKELIAQIKGDSVYSKLKYEAGTHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TETQGR+HTSA TVAVIPE D++E I+I P ++++D YR+SG GGQ +N TDSAVR+T
Sbjct: 185 PDTETQGRVHTSAITVAVIPEVDDVE-IDIKPNEIKMDVYRSSGCGGQSVNTTDSAVRLT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
HIPTGIVV Q+++SQHKN+ A+K+L AR+ +++L++Q T+ R+L +GS + +
Sbjct: 244 HIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYEAELQKQLDETSSQRKLQVGSGDRSEKI 303
Query: 308 NIF 310
+
Sbjct: 304 RTY 306
>gi|402548864|ref|ZP_10845717.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86C]
Length = 361
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M M KL+K RL E++ LL E +I+ Y +E + L PIV+ + Y +++
Sbjct: 1 MHDSMAIKLDKLKNRLSEIETLLIDSETVKDIEKYTLLNKEFADLRPIVDKFKEYNEVSG 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I A ++L +D E++ A DE+ + +E E+K ++LPKD D + F+EIRAG
Sbjct: 61 SIKDAHDILESDDEELKALAEDELKEIAGKPESLEQELKVMLLPKDSADDGSAFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R +ER W ++I +E GG KE++A++ G V+ LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRLAEREGWNLDVIDIKQAEQGGLKEVVAQLEGKGVFKVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGRIHTS CTVA++PE +E++DI I+ DLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRIHTSTCTVAILPEVEEVQDIAIDKNDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIP+G+VV+CQ+ RSQHKNK AL +L +++K ++ QQ + A R++L+
Sbjct: 241 KTDSAVRLTHIPSGLVVECQDGRSQHKNKEKALSLLASKLKQQEIESQQESIASERKILV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSEKIRTY 312
>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
gi|189039993|sp|A8FYZ0.1|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
Length = 361
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 213/302 (70%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ V ++ + + +E+S L +V + ++++ E
Sbjct: 1 MKDSVIRKLEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ AKEM +D E++ A +E+ AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLEAAKEMASDDDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY ++ E W+ E+++ + E GG+KE+IA++ G VY +LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+PE E E I IN DL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+R+THIP+GIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSAEESTRRNLV 300
Query: 299 GS 300
GS
Sbjct: 301 GS 302
>gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
gi|238058709|sp|B6EHH5.1|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
Length = 362
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL V + + RE+S L + + + Y+K+ E
Sbjct: 1 MKASIRVKLETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQLEEVTQCFQAYEKVQE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK+ + E++ L++PKD ND+RN F+EIRAG
Sbjct: 61 DLVAAQEMAQEDDAEMREMAQDEIKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F +L RMY RF+E+ W+ E++S SE GG+KE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACT+AV+ E E + I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTG VV+CQ++RSQHKNKA A+ +L ARI ++ + + + RR L+
Sbjct: 241 TTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAVVSDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
Z-2901]
gi|119361519|sp|Q3A928.1|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 358
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/309 (48%), Positives = 217/309 (70%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL++ ++ +EL L++ EV + + + V+ H+ + IV++Y YKK ++I
Sbjct: 1 MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+ ML+ D + R E++ K+R ++E ++K L+LPKD ND++N+ +EIRAG GG
Sbjct: 61 AERMLDEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL RMY ++++R WK EI+ +++GG+KE+I I G VYS++KFESGV
Sbjct: 121 EEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTS TVAV+PEA+E+E + INP DLRID + ASGAGGQH+NKT+
Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLPEAEEVE-VEINPNDLRIDVFCASGAGGQHVNKTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITHIPTGIVV CQ+++SQHKNK A+KIL AR+ D +EQ++ A R+ +G+
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAELASARKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|451980716|ref|ZP_21929102.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
gi|451762052|emb|CCQ90341.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
Length = 357
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 212/309 (68%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +L+ KR ++L+ L++ +V+ N +Y K REHS L IV Y +K+ + +
Sbjct: 1 MFEQLDDIEKRYEKLNNLMSDPKVYGNPAEYQKCAREHSELSDIVSEYREWKRADRQLQE 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
+++L+ D E+ A +E+ R + E ++K ++LPKD D++++ +EIRAGTGG
Sbjct: 61 NRKVLDEESDRELIEMAREEVESLILRKEEHEAQLKLMLLPKDPRDEKSVIMEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ LF DL RMY R++E WK E+++ S++ +GGYKEII I G YS+LKFE+G
Sbjct: 121 DEAGLFAADLFRMYSRYAEDRKWKIEVLASSVTGVGGYKEIICNIQGKGAYSRLKFEAGT 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TETQGRIHTSA TVA++PEA+E+ D+ INP DL+ID YR+SG GGQ +N TD
Sbjct: 181 HRVQRVPATETQGRIHTSAVTVAILPEAEEV-DVQINPGDLKIDVYRSSGPGGQSVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+P+GIVV CQ+++SQHKNK ALK+L AR+ + + R QQ A+ R+ +G+
Sbjct: 240 SAVRITHVPSGIVVTCQDEKSQHKNKERALKVLRARLYEEEQRRQQEAMAQDRKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
Length = 267
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 195/265 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +EL+ LL V ++ + +E+S L +V+ +N + ++N+
Sbjct: 2 MKDSIIAKLESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQ 61
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I A+ +L+D EM+ A EI +K I ++E +++ L+LPKD ND+ N ++EIRAGTG
Sbjct: 62 NIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTG 121
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ +F DL RMY R++E W E++S + SE GG+KEII + G VY +LKFESG
Sbjct: 122 GDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESG 181
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVPKTE+QGRIHTSACTVAV+PE E E INPADLRIDTYR+SGAGGQH+N T
Sbjct: 182 GHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTT 241
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHK 265
DSAVRITHIPTGIVV+CQ++RSQHK
Sbjct: 242 DSAVRITHIPTGIVVECQDERSQHK 266
>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
gi|119361604|sp|Q087I4.1|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
frigidimarina NCIMB 400]
Length = 361
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL+ V ++ + +E+S L +V + +++ +
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLSDATVISDQDRFRGLSKEYSQLEDVVSSFKAFQQAQK 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D AKEML +DLEMR A DE +K+ + +E E++ L+LP D ND N F+EIRAG
Sbjct: 61 DFDYAKEMLEEDDLEMREMAQDEYKQSKQVLEKLEDELQVLLLPTDPNDDTNAFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R+ E N W+ E+++ + E GG+KEII +I G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLYRMYSRYCEANRWQMEVMNVNEGEHGGFKEIIVKISGDGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSACTV V+ E E E I+IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVVVLHEVPEAEAISINAADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIP+GI+V+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEETTRRSLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
gi|119361624|sp|Q2LWU9.1|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
aciditrophicus SB]
Length = 357
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M SKL++ R EL+ LL+ V Y K +EH+ L +VE++ Y+K+ I
Sbjct: 1 MFSKLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEE 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
A+++L +D E++ A +E+ ++ + +E +K L+LP+D ND RN+F+EIRAGTGGD
Sbjct: 61 AQQLLRGDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSE-IGGYKEIIARIIGLNVYSKLKFESGV 181
E+ LFV DL RMY R++E WK E+IS + S +GG+KEIIA I G YS+LK+ESGV
Sbjct: 121 EAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE QGRIHTSA TVA++PEADE+E + I+P DLRID + +SG GGQ +N TD
Sbjct: 181 HRVQRVPVTEAQGRIHTSAVTVAIMPEADEVE-VTIDPNDLRIDVFHSSGHGGQSVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+PTG+VV CQ+++SQ KNKA ALK+L AR+ D +++Q ++ R+ +GS
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDEISEARKSQVGSG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a]
gi|229576662|sp|B2FQ14.1|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas
maltophilia K279a]
gi|456738067|gb|EMF62744.1| Peptide chain release factor 1 [Stenotrophomonas maltophilia EPM1]
Length = 360
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 140/271 (51%), Positives = 199/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE + L PI + + D+ A+ M D ++R A +EI A+ R+ ++E E+ L
Sbjct: 40 REFAQLEPIAIALADESRAKADLAAAEGMRADPDLRELADEEIAAAQARLLELEQELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++P+D D+ N+F+E+RAGTGGDE+A+F DL RMY R++ER WK EI S + E GGY
Sbjct: 100 LVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGY 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++AR++G +S+LKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADE++DI INP
Sbjct: 160 KEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADL++DT+R+SGAGGQH+NKT+SA+RITH+PTG+VV+CQ +RSQH N+ A+K L A++
Sbjct: 220 ADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ + Q + A+ RRL +GS + + +
Sbjct: 280 DAERQRQDAAQAESRRLQVGSGDRSQRIRTY 310
>gi|436842689|ref|YP_007327067.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171595|emb|CCO24968.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 356
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/298 (50%), Positives = 208/298 (69%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE+ + +L+ L EV+NN + Y K HS L +V + YK++ D+
Sbjct: 1 MFAKLEEIERSFMDLEQELADPEVYNNQERYKKVTIAHSELGEVVNAFREYKQLASDLED 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEM +D E+R A EI K+R+ +E E+K L+LPKD D +NI +EIRAGTGG+
Sbjct: 61 NKEMAKDSDPEIREMAEMEIAEIKERLPRLEDELKFLLLPKDPMDGKNIILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E+N WK E++S + + GG+KEIIA + G +YS++K+ESG H
Sbjct: 121 EAALFGADLFRMYSRYAEQNGWKVEVLSSNPTGTGGFKEIIAAVSGSRIYSRMKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TETQGRIHTSA TVA++PEA+EI D+ + DLR+D +RASG GGQ +N TDS
Sbjct: 181 RVQRVPATETQGRIHTSAATVAIMPEAEEI-DVQVRNEDLRVDVFRASGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
A+RITHIPTG+VV CQ+++SQHKNKA A+K+L +R+ + +Q A+ RR +GS
Sbjct: 240 AIRITHIPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQQEQDKQHEEMAEQRRAQVGS 297
>gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 365
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/297 (52%), Positives = 204/297 (68%), Gaps = 3/297 (1%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
S+LE+ + R EL LL + + + +E + P++EL +++ D
Sbjct: 9 SQLEQLAFRFDELSQLLASPGAAGDTQRFQSLSKELGEIGPVLELLRRHQQRQRDRDEGG 68
Query: 67 EML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
ML D E+R A +E+ A+ + IE ++ +LPKD ND R++F+EIRAGTGG+E
Sbjct: 69 RMLLEEQDAELRALASEEVAAAEAELDQIEAALRIRLLPKDPNDDRSVFLEIRAGTGGEE 128
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF L RMY R++E + I+S S SE GGYKE++ I G YS LKFESG HR
Sbjct: 129 AALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEISGRGAYSCLKFESGGHR 188
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TETQGRIHTSACTVAV+PE D + +I INPADLRIDTYRASGAGGQHINKTDSA
Sbjct: 189 VQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRASGAGGQHINKTDSA 248
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+RITH+P+G+VV CQ DRSQHKN+A A+ +L AR+ + + +QQS A+ RRLL+GS
Sbjct: 249 IRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAAAQTRRLLVGS 305
>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
Length = 363
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 210/311 (67%), Gaps = 4/311 (1%)
Query: 3 HLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDI 62
+ + K+E +R +E+ LL Q EV +N ++ K REH+ L +V + Y+++
Sbjct: 5 QVFIDKMEALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQE 64
Query: 63 ITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
A+ M+ +D EMR A +E+ ++ + E IK L+LPKD ND +NI +E+RAGT
Sbjct: 65 SEARAMVASESDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGT 124
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDE+ALF DL RMY+R++ER WK EI+S S GG KE + I G +VYS LK+ES
Sbjct: 125 GGDEAALFAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYES 184
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
GVHRVQRVP TE+QGR+HTSA TV V+PEA+E+ DI + DLRID YR+SG GGQ +N
Sbjct: 185 GVHRVQRVPATESQGRVHTSAATVVVMPEAEEV-DIKLEEKDLRIDVYRSSGPGGQSVNT 243
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSAVR+TH+PTGIVV CQ+++SQHKNKA A++IL +R+ D ++ +Q++ RR ++
Sbjct: 244 TDSAVRVTHLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVK 303
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 304 SGDRSEKIRTY 314
>gi|424667173|ref|ZP_18104198.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
Ab55555]
gi|401069842|gb|EJP78363.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
Ab55555]
Length = 360
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 199/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE + L PI + + D+ A+ M D ++R A +E+ A+ R+ ++E E+ L
Sbjct: 40 REFAQLEPIAIALADESRAKADLAAAEGMRADPDLRELADEEMAAAQARLLELEQELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++P+D D+ N+F+E+RAGTGGDE+A+F DL RMY R++ER WK EI S + E GGY
Sbjct: 100 LVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGY 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++AR++G +S+LKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADE++DI INP
Sbjct: 160 KEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADL++DT+R+SGAGGQH+NKT+SA+RITH+PTG+VV+CQ +RSQH N+ A+K L A++
Sbjct: 220 ADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ + Q + A+ RRL +GS + + +
Sbjct: 280 DAERQRQDAAQAESRRLQVGSGDRSQRIRTY 310
>gi|384227612|ref|YP_005619357.1| peptide chain release factor 1 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538552|gb|AEO08529.1| peptide chain release factor 1 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 361
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 217/304 (71%), Gaps = 2/304 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKV-REHSFLYPIVELYNNYKKIN 59
M + +L KL+ R +E++ +LTQK + N +D K + +E+ L I++ + ++K+
Sbjct: 1 MNNSILKKLKSLRNRYQEIELMLTQKNIIAN-RDQLKNLSKEYLKLSKIIKYFIEWEKLE 59
Query: 60 EDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
DI MLND+EM++ A +E+ + K+ +E +I +L+LP+D NDK + FIEIR+ T
Sbjct: 60 IDIKNIHIMLNDVEMQDIAEEELYICNKKQKILEEKINRLLLPEDPNDKHSCFIEIRSAT 119
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDES++F +L RMY R++E WK EI+S S SE GG+KEIIA+I G +LKFES
Sbjct: 120 GGDESSIFAGELFRMYTRYAENCLWKVEIMSSSESEKGGFKEIIAKITGKGACGRLKFES 179
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVP+TE+QGRIHTS CTVAV+P + E IN ADL+IDT+R+SGAGGQH+N
Sbjct: 180 GGHRVQRVPETESQGRIHTSTCTVAVMPVTPKAEKEVINFADLKIDTFRSSGAGGQHVNT 239
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSA+RITHIPTG VV+CQ++RSQHKNKA AL IL ARI + L ++ + MR++L+G
Sbjct: 240 TDSAIRITHIPTGNVVECQDERSQHKNKAKALSILSARIYAATLEKKHQENSSMRKILLG 299
Query: 300 SVQK 303
+ ++
Sbjct: 300 TGER 303
>gi|307722037|ref|YP_003893177.1| peptide chain release factor 1 [Sulfurimonas autotrophica DSM
16294]
gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
autotrophica DSM 16294]
Length = 355
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/297 (49%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL F R EL +L+ ++ ++IK + +E S L PIVE YK + E+I
Sbjct: 1 MLADKLTPFINRYNELSEMLSSPDITSDIKRMTELSKEQSSLLPIVEKTKEYKALIEEIS 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
+KEML+D EM + A +E+ + ++ IE EIK L+LPKD ND RNI +E+RAG GGDE
Sbjct: 61 DSKEMLSDPEMGDMAKEELKELEPQVPLIEEEIKMLLLPKDPNDDRNIIVELRAGAGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+A+FV DL Y R+++ WK E++S S S+ GGYKE++A I G VYS+LK+E G HR
Sbjct: 121 AAIFVGDLFDAYTRYADLKGWKIELMSSSPSDAGGYKEVVALIKGEQVYSRLKYEGGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGR+HTSA TVAV+PE D++E I IN DL+ID R+SG GGQ +N TDSA
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDVE-IEINENDLKIDVMRSSGCGGQSVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+P+G+VV Q+ +SQHKN+ A+K+L AR+ D +++E Q+ A R +G+
Sbjct: 240 VRITHLPSGLVVTNQDQKSQHKNREKAMKVLKARLYDLQMQEAQAEDAAQRAAQVGT 296
>gi|302390589|ref|YP_003826410.1| peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani
DSM 16646]
gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
[Thermosediminibacter oceani DSM 16646]
Length = 364
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ +R +EL +++ V +++ K +EH+ L IV Y YKK+ +I
Sbjct: 1 MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60
Query: 65 AKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++E+L ND EM F +E+ +KR +++ +K L+LPKD ND++++ +EIRAG G
Sbjct: 61 SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF DL RMY R++ER WK E++S S +E+GG+KE+I ++G YS+LK+ESG
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQR+P TE GRIHTS TVAV+PEA+E+ D+ INP +LRID +R+SG GGQ +N T
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEEV-DVEINPNELRIDVFRSSGHGGQSVNTT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV CQ++RSQ KN+ A+KIL A++ + K REQ A+ RR +G+
Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKLLEMKQREQNEKIAQSRRSQVGT 299
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 300 GDRSERIRTY 309
>gi|415878248|ref|ZP_11544131.1| peptide chain release factor 1 [Escherichia coli MS 79-10]
gi|342927469|gb|EGU96191.1| peptide chain release factor 1 [Escherichia coli MS 79-10]
Length = 294
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 184/233 (78%)
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTGGDE+ALF
Sbjct: 2 MLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALF 61
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG HRVQRV
Sbjct: 62 AGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRV 121
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N TDSA+RIT
Sbjct: 122 PATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRIT 181
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 182 HLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 234
>gi|365920134|ref|ZP_09444486.1| peptide chain release factor 1 [Cardiobacterium valvarum F0432]
gi|364578492|gb|EHM55694.1| peptide chain release factor 1 [Cardiobacterium valvarum F0432]
Length = 359
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 208/300 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KL +R +EL+ LL N + +EH+ + PI+ + ++ ++ +
Sbjct: 1 MHPAIREKLATLRERHEELNALLADPATAVNADLLRRYAQEHAQIAPIITILDDTARLEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
++ E+ +D +M E + +I E + + ++PKD D ++++EIRAGTG
Sbjct: 61 ELAGLAELAHDPDMAELVAAERPQLEAQIAANEQTLARHMIPKDPLDGADVYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E+ WK EI+S + E GGYKEII++I G NVYS LK+ESG
Sbjct: 121 GDEAAIFAGDLFRMYGKYAEQKNWKLEILSENPGEHGGYKEIISQISGQNVYSTLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+ GRIHTSA TVA++P DE+E I+INPADL++DTYR+SGAGGQHINKT
Sbjct: 181 AHRVQRVPETESGGRIHTSAATVAILPVGDEVEPIDINPADLKVDTYRSSGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+P+GIVV+CQ +RSQHKN+A A+++L AR+ D + ++ QS A R+ L+GS
Sbjct: 241 DSAIRITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDIERQKAQSEQAAERKNLVGS 300
>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
gi|212672934|gb|EEB33417.1| peptide chain release factor 1 [Desulfovibrio piger ATCC 29098]
Length = 356
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 216/308 (70%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE K+ EL+ L Q +V+N+ Y K + H+ L +VEL+ ++ + +++
Sbjct: 1 MFAKLEGLEKKYMELEQALAQPDVYNDQDQYRKLTKAHADLRDVVELFRRHRSLTQELEE 60
Query: 65 AKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
K++L+D + ++ A +EI A+ + ++E +IK L+LPKD D++N +EIRAGTGG+
Sbjct: 61 NKQLLHDSDPDIKAMAQEEIAAAEAELPELEHKIKVLLLPKDPLDEKNTILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S S S+ GGYKEII I G VYS LKFE+G H
Sbjct: 121 EAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLISGDRVYSHLKFEAGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TETQGRIHTSA TVAV+PEA+E+ D+ I P DLRID YRASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMPEAEEV-DVEIRPEDLRIDIYRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTG VV CQ++RSQHKNKA A+K+L +RI ++ Q S + R+ +GS
Sbjct: 240 AVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|384228183|ref|YP_005619918.1| peptide chain release factor 1 [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345539116|gb|AEO07983.1| peptide chain release factor 1 [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 361
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/301 (50%), Positives = 214/301 (71%), Gaps = 2/301 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKV-REHSFLYPIVELYNNYKKIN 59
M + +L+KL+ R +EL+ +LTQK++ N ++Y K + +E+ L I+ ++ ++ +N
Sbjct: 1 MNNSILNKLKSLHNRYQELECMLTQKDIITN-REYFKSLSKEYLKLSKIITIFIQWETLN 59
Query: 60 EDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
+DI + +LNDLEM A +E+ L ++ +E EI +LPKD ND+ + FIEIR+ T
Sbjct: 60 KDIKNIEFLLNDLEMHEIAKEELYLLNQKQKKLEKEISTSLLPKDPNDQHSCFIEIRSAT 119
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDESA+F +L RMY R++E WK E++ S S+ GG+KEII +I G +LKFES
Sbjct: 120 GGDESAIFAGELFRMYFRYAELCLWKVEVMYTSESDKGGFKEIILKIKGKGACGRLKFES 179
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVP+TE+QGRIHTS CTVAV+P + E IN ADL+IDT+R+SGAGGQH+N
Sbjct: 180 GGHRVQRVPETESQGRIHTSTCTVAVMPVIPKAEKEEINSADLKIDTFRSSGAGGQHVNT 239
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSA+RITHIPTG VV+CQ++RSQHKNKA AL IL ARI +KL + + +R++L+G
Sbjct: 240 TDSAIRITHIPTGQVVECQDERSQHKNKAKALSILSARIYAAKLEKTHQENSSIRKILLG 299
Query: 300 S 300
S
Sbjct: 300 S 300
>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
gi|61214579|sp|Q5QUZ8.1|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
Length = 364
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 211/305 (69%), Gaps = 2/305 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE +R +E+ LL + +V ++ + RE+S L +V + Y++ +D AK+
Sbjct: 9 KLEGLVERYQEVQALLGEPDVISDQNRFRSLSREYSQLEEVVGCFEEYRQNQDDQAAAKD 68
Query: 68 MLNDLEMRNFALDEINL--AKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
M D + + E L A+K ++E ++ L+LPKD ND R+ ++EIRAG GGDE++
Sbjct: 69 MAEDDDAEMREMAEEELKEARKAEEELENRLQLLLLPKDPNDDRSCYLEIRAGAGGDEAS 128
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
+F DL RMY R++E+N WK I+S S E GGYKEIIA + G VY ++KFESG HRVQ
Sbjct: 129 IFAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHMSGDGVYGRMKFESGGHRVQ 188
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP+TE+QGRIHTSACTVAV+PE E E + INPADLR+DTYRASGAGGQH+N+TDSA+R
Sbjct: 189 RVPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDTYRASGAGGQHVNRTDSAIR 248
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKS 305
+THIPTG+VV+CQ +RSQHKN+A A+ +L ARI+ + ++Q+ RR L+GS +
Sbjct: 249 LTHIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKRQAEEDSTRRNLVGSGDRSE 308
Query: 306 PLNIF 310
+ +
Sbjct: 309 RIRTY 313
>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
Length = 357
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 205/307 (66%), Gaps = 4/307 (1%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
L +KL++ R E++ LL ++Y + RE S L P+VE + D+
Sbjct: 5 LPTAKLDQLVARHAEVEALLA---AGAEGEEYVRLGREFSDLSPVVEQVRALRAAERDLA 61
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
A+E+L D EMR+ A E+ + + + E++ +LPKD D+R + +E+RAGTGGDE
Sbjct: 62 DARELLADPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMDERGVILEVRAGTGGDE 121
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ALF DL RMY R++ W E++S S +GGYKE++A + G Y++LKFESGVHR
Sbjct: 122 AALFAGDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVHGRGAYARLKFESGVHR 181
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP TET GRIHTSA TVAV+PEA+++ D++IN +DLRID YRA GAGGQH+NKT+SA
Sbjct: 182 VQRVPDTETSGRIHTSAATVAVLPEAEDV-DVDINESDLRIDVYRAQGAGGQHVNKTESA 240
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIPTG+VV Q++RSQH+NKA A+ +L +R+ D + ++ +N A R+ +GS +
Sbjct: 241 VRITHIPTGMVVAVQDERSQHRNKARAMALLRSRMLDEERQKADANRAADRKGQVGSGDR 300
Query: 304 KSPLNIF 310
+ +
Sbjct: 301 SERIRTY 307
>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
Length = 361
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 211/296 (71%), Gaps = 3/296 (1%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
++LE+ R ++ L + N +++ K+ +EH+ L +VE + +Y K +++ +
Sbjct: 9 ARLEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSYNKYEQELEQNR 68
Query: 67 EML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
++ +D E+ A E+ A+ + D+E ++ L+LP+D D++N+ +EIRAGTGGDE+
Sbjct: 69 LLMADDDEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLEIRAGTGGDEA 128
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF +LLRMY+R++E WK EI+S+ + GG+KE+IA I G YS+LK+ESG HRV
Sbjct: 129 ALFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQLKYESGAHRV 188
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP TE+QGR+HTSA TVAV+PEADE+E ++I P +LRID +R+SG GGQH+N TDSAV
Sbjct: 189 QRVPATESQGRVHTSAVTVAVLPEADEVE-VDIKPEELRIDYFRSSGPGGQHVNTTDSAV 247
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
RITH+PTG+VV CQ+++SQHKNKA ALK+L AR+ + +EQQ+ A RR +GS
Sbjct: 248 RITHLPTGLVVSCQDEKSQHKNKAKALKVLAARLLEKMEQEQQAALAANRRSQVGS 303
>gi|310779238|ref|YP_003967571.1| peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM
2926]
gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
polytropus DSM 2926]
Length = 357
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 216/312 (69%), Gaps = 9/312 (2%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIK---DYCKKVREHSFLYPIVELYNNYKKINED 61
M KLE+ K+ +EL LL EV + K +Y K + E + P+VE Y YK+ ++D
Sbjct: 1 MFGKLEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNE---ITPVVEKYKEYKRYSDD 57
Query: 62 IITAKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ KE L D EM+ L+E+ ++ + +E E++ L+LPKD ND +N+ IEIR G
Sbjct: 58 LEFTKESLKVEKDHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGG 117
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF +L RMY R++ERN WK E++S+S +GG KEI+ I G YSKLKFE
Sbjct: 118 TGGDEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFE 177
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+ GRIHTS TVAV+PE D++E + I P++L+IDT+R+SGAGGQH+N
Sbjct: 178 SGVHRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVN 237
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+P+G++V+CQ++RSQ KN+ A+K+L ++ + ++ +Q+S R+L +
Sbjct: 238 TTDSAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQRSEVESTRKLQV 297
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 298 GTGSRSEKIRTY 309
>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
Length = 356
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 213/309 (68%), Gaps = 3/309 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ + EL+ L++ ++ N ++ K + H+ L IV + YKK+ + +
Sbjct: 1 MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+EML D + R E+ K + +E E++ L+LPKD ND++N+ IEIRAG GG
Sbjct: 61 AREMLKEKLDDDFREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ALF DL RMY R++E W+ E++ + S++GG+KE++ I G YS+ K+ESGV
Sbjct: 121 DEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE GRIHTS TVAV+PEAD+++D+ INP+DLRIDTY ASGAGGQH+NKT+
Sbjct: 181 HRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKTE 240
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+PTGIVVQCQ+++SQ KN+ A+++L A++ ++ EQ++ A+ R+ +G+
Sbjct: 241 SAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKLLEAAQEEQRAQLAQTRKSQVGTG 300
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 301 DRSERIRTY 309
>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
Length = 357
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/311 (48%), Positives = 210/311 (67%), Gaps = 8/311 (2%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
L KL+ R EL+ +++ + + Y K RE++ L P+V K +D+
Sbjct: 2 LARHKLDTLLDRFAELEHMMS---ANPDPGAYVKLSREYAGLEPLVGKIRALIKAEQDLA 58
Query: 64 TAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
AK +L +D EMR A E + ++R+ ++ +++ +LPKD+ D + +E+RAGT
Sbjct: 59 GAKALLQDPSSDAEMRELAEMERDELEERVEELAQDVRIGLLPKDEADSNDAILEVRAGT 118
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GGDE+ALF DL RMY R++E WK EI+S S E+GGYKE+IA + G NV++KLKFES
Sbjct: 119 GGDEAALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIASVSGENVFAKLKFES 178
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
GVHRVQRVP TE+ GRIHTSA TVAV+P+A+++ DI++ +DLRIDTYRASGAGGQH+N
Sbjct: 179 GVHRVQRVPATESGGRIHTSAATVAVLPQAEDV-DIDVQESDLRIDTYRASGAGGQHVNT 237
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSAVRITH+PTGIVV Q++RSQHKNKA A+++L ARI D + S + RRL +G
Sbjct: 238 TDSAVRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERERAASERTEARRLQVG 297
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 298 SGDRSERIRTY 308
>gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana)
tropicalis]
Length = 460
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 177/228 (77%)
Query: 83 NLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERN 142
+L + R+ +E E+++L+LPKD +D RN F+EIRAGTGGDESALF DL R+Y R++
Sbjct: 183 DLGEIRVLFLENELQRLLLPKDPDDARNAFLEIRAGTGGDESALFAGDLARVYTRYAATV 242
Query: 143 YWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACT 202
W+ EI+S + SE+GGYKE++ RI G +VY L+FESG HRVQRVP TETQGRIHTSACT
Sbjct: 243 GWRVEIMSANESELGGYKEVVLRIEGDHVYGALRFESGGHRVQRVPATETQGRIHTSACT 302
Query: 203 VAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRS 262
VAV+PE DE + I +NPADLRIDT+RASGAGGQHINKTDSAVR+ HIPTGIV +CQ+ RS
Sbjct: 303 VAVMPEPDEQQAIMLNPADLRIDTFRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRS 362
Query: 263 QHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
QH NKA AL++L ARI+D + E+ + A +RR LIGS + + +
Sbjct: 363 QHSNKAKALQVLQARIQDKERSERAAKEAAVRRGLIGSGDRSDRIRTY 410
>gi|406942107|gb|EKD74426.1| hypothetical protein ACD_44C00453G0004 [uncultured bacterium]
Length = 361
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/315 (44%), Positives = 224/315 (71%), Gaps = 8/315 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKK 57
++ ++ ++L +R +E+ LL+ ++ N +D K E++ L P+V Y +Y+K
Sbjct: 2 IRDVLQNRLVSLVERHEEIRALLSDEKTIKEQNRFRDLSK---EYAQLEPLVNCYQDYQK 58
Query: 58 INEDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEI 115
+ + + ML +D +R A +E+ + KK+I +E +++ L+LP+D ND NIF+EI
Sbjct: 59 TQKTMNVTESMLKESDETLRTLAEEEMQILKKKITALEEQLQYLLLPQDPNDSHNIFLEI 118
Query: 116 RAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKL 175
RA GGDES++F DL RMY+++++ +W+ E+I + E GGYK I+AR+ G NVYS L
Sbjct: 119 RAAAGGDESSIFAGDLFRMYVKYAQSKHWQVEVIHENPGEQGGYKIIVARVSGQNVYSNL 178
Query: 176 KFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQ 235
KFESG HRVQRVP+TE QGR+HTS CTVA++PE +EI+++ +NP DL+IDT+RASGAGGQ
Sbjct: 179 KFESGAHRVQRVPETENQGRVHTSTCTVAILPEMEEIDEVIVNPVDLKIDTFRASGAGGQ 238
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKTDSA+RITH+P+G+VV+CQ++RSQHKN+A A+ +L +++ D ++ Q+ A+ R+
Sbjct: 239 HVNKTDSAIRITHLPSGVVVECQDERSQHKNRARAMSLLQSKLLDREVTRQRQAQAQTRK 298
Query: 296 LLIGSVQKKSPLNIF 310
L+G+ ++ + +
Sbjct: 299 SLVGTGERSERIRTY 313
>gi|437501133|ref|ZP_20774264.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435238863|gb|ELO19477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
Length = 294
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 183/233 (78%)
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D EMR A +E+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTGGDE+ALF
Sbjct: 2 MLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALF 61
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG HRVQRV
Sbjct: 62 AGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRV 121
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TE+QGRIHTSACTVAV+PE E E +INPADLRIDT+R+SGAGGQH+N TDSA+RIT
Sbjct: 122 PATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRIT 181
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTGIVV+CQ++RSQHKNKA AL +L ARI ++ ++Q A RR L+GS
Sbjct: 182 HLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGS 234
>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
gi|226739103|sp|B8E003.1|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
Length = 367
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 225/313 (71%), Gaps = 4/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
++ L++ KLE+ KR +E++ LL +++V ++ Y ++E + + IV+ + YK++ +
Sbjct: 2 LQKLVIDKLEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLLK 61
Query: 61 DIITAKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
+ +EM+ D ++R+ A E+ ++++ +E E+K L+LPKD ND++NI +EIRA
Sbjct: 62 EKEDLEEMVKEEQDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEIRA 121
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGG+E+ALF DL RMY+ ++++ WK EI+S + + +GG+KEII + G YS+LKF
Sbjct: 122 GTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRLKF 181
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESGVHRVQRVP TE+ GRIHTS TVAV+PE +EIE + I+P DLRI+T+R+ GAGGQH+
Sbjct: 182 ESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEIE-VEIDPKDLRIETFRSGGAGGQHV 240
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
NKT+S VRITHIP+GIVVQCQ++RSQH+N+ A+K+L AR+ + RE+++ A RR
Sbjct: 241 NKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQQ 300
Query: 298 IGSVQKKSPLNIF 310
+G+ ++ + +
Sbjct: 301 VGTGERSEKIRTY 313
>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
17241]
gi|167667899|gb|EDS12029.1| peptide chain release factor 1 [Anaerotruncus colihominis DSM
17241]
Length = 358
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 211/310 (68%), Gaps = 5/310 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ + R +E+ L + +V + + Y ++E+S L PIVE Y Y+ +
Sbjct: 1 MFDKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDE 60
Query: 65 AKEMLN----DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
A+E+L+ D EMR A ++++ + + E+K L+LP+D ND +N+ +EIR G G
Sbjct: 61 AREVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF L RMY ++E W+ E+IS + +E+GGYKEI I G YS+LK+ESG
Sbjct: 121 GEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP+TETQGRIHTS TVAV+PEA+E+E ++P DL+ID +R+SGAGGQH+NKT
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLPEAEEVE-FELDPRDLQIDVFRSSGAGGQHVNKT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SA+R+TH+PTG+VV+CQ++RSQ+KNK ALK+L AR+ D K+REQ A RRL +G+
Sbjct: 240 SSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKVREQNDKIATERRLQVGT 299
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 300 GDRSERIRTY 309
>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
gi|254790894|sp|C0QTI3.1|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
Length = 361
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 213/308 (69%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+L KLE ++LK+L+ L+ EV + K + +EH + +LY YKK+ +DI
Sbjct: 6 LLQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEE 65
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
K +LN D EMR A +E+ +R ++E EI+ +LPKD ND++N+ +EIR G GG+
Sbjct: 66 TKSLLNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGE 125
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF +L RMY R++ER WK E++S ++ GG KE+IA I G YS+LKFESGVH
Sbjct: 126 EAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVH 185
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE+ GRIHTS TVAV+PEA+E+ DI I P +L+I+T RASGAGGQH+N TDS
Sbjct: 186 RVQRVPETESSGRIHTSTATVAVLPEAEEV-DIEIKPEELKIETMRASGAGGQHVNTTDS 244
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTGIVV CQ++RSQ +N+A A++IL AR+KD R ++ K RR+ +G+
Sbjct: 245 AVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRMQVGTGD 304
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 305 RSEKIRTY 312
>gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
Length = 360
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 205/300 (68%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + KL +R EL+ LL E + + +EH+ L P++ + ++ + +
Sbjct: 1 MHPAIREKLASLRERYDELNGLLALPETAADPDQLRRYAQEHAQLAPVIAILDDTEALER 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ ++ D EM A E + +I E ++ + ++PKD D +I++EIRAGTG
Sbjct: 61 QLADLADLETDPEMAELAAAERPALEAQIAANEHQLARHMIPKDPLDGADIYLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMY +++E+ WK EI+S + E GGYKEII++I G NVYS LK+ESG
Sbjct: 121 GDEAAIFAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQISGNNVYSTLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+ GRIHTSA TVA++P D+I+ I INPADL++DTYRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDTYRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+P+GIVV+CQ +RSQHKN+A A+++L AR+ D + + Q+ A R+ L+GS
Sbjct: 241 DSAIRITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTKAQNEQAAERKSLVGS 300
>gi|341614013|ref|ZP_08700882.1| peptide chain release factor 1 [Citromicrobium sp. JLT1363]
Length = 355
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 205/293 (69%), Gaps = 3/293 (1%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L++ + R E++ + ++ +++ + R+++ L P+ +L K E++ ++
Sbjct: 7 RLDQIANRFAEIEARMASGQLEG--EEFVQASRDYAELEPVAKLALELKAAREEVAGLED 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D EMR A +E+ +RI ++E ++ +LP+D D + +EIRAGTGGDE+ALF
Sbjct: 65 MLSDPEMRAMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGGDEAALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY RF+ WK E +S S SE+GG+KEI+A + G V++KLKFESGVHRVQRV
Sbjct: 125 AGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVANVTGTGVFAKLKFESGVHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+ GRIHTSA TVAV+PE DE+ D+ I+ DL+IDTYRASGAGGQH+N TDSA+RIT
Sbjct: 185 PETESGGRIHTSAATVAVLPEPDEV-DVQIDAGDLKIDTYRASGAGGQHVNTTDSAIRIT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTG+VV CQ+ RSQHKN+ A+++L AR+ + + + A+ R+ ++GS
Sbjct: 244 HLPTGLVVTCQDGRSQHKNREKAMQVLRARLYEQQREATEGAEAEARKAMVGS 296
>gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
Length = 360
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 211/311 (67%), Gaps = 8/311 (2%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
+L KL+ + +EL+ L++ E ++ + +EH+ L PI+ + YK++ + I
Sbjct: 4 VLEKLQAVEDKYRELESLISDPETMADMAKWQAYTKEHAALTPIITKFRRYKEVLKGIEE 63
Query: 65 AKEMLN---DLEMRNFALDEIN--LAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
AK ML D EM F E+ + +K D EL I L+LPKD ND++N+ +EIR G
Sbjct: 64 AKSMLGEALDHEMHAFVESELADLMEQKEALDKELPI--LLLPKDPNDEKNVIVEIRGGV 121
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GG+E+ALF DL RMY R++E+ WK E++ + +EIGG+KE+ + G YS LK+ES
Sbjct: 122 GGEEAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMVTGYGAYSYLKYES 181
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G HRVQRVP TE+ GRIHTSA TVAV+PEA+++ D+ INPADLRIDTY ASGAGGQ++N+
Sbjct: 182 GTHRVQRVPVTESGGRIHTSAATVAVLPEAEDV-DVAINPADLRIDTYCASGAGGQYVNR 240
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
T++A+RITH+PTGIVVQCQ+++SQ KNK A+K+L ARI D +EQ++ A RR +G
Sbjct: 241 TETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARILDKARQEQEAAVAADRRSQVG 300
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 301 SGDRSERIRTY 311
>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
champanellensis 18P13]
Length = 361
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 208/300 (69%), Gaps = 5/300 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ ++ +E+ L+ V +I Y + ++E+ L PIV+ Y YK+ + +
Sbjct: 1 MFEKLQIMEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQE 60
Query: 65 AKEMLN----DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
A+E+L+ D E+R A E K+++ + ++K L+LPKD ND RN+ IEIR G G
Sbjct: 61 ARELLDAGSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF N L RMY ++E WK E++S + +E+GG+KEI I G YS+LK+ESG
Sbjct: 121 GEEAALFANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP+TE+QGRIHTS TVAV+ EADE+E + INP DL+ID +R+SGAGGQHINKT
Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVLVEADEVE-LAINPTDLKIDVFRSSGAGGQHINKT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SAVRITH+PTG+VV+CQ++RSQ KNK A+ IL +R+ + +EQQ A RR+ +G+
Sbjct: 240 ESAVRITHLPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQDKIASQRRMQVGT 299
>gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384227038|ref|YP_005618788.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|414562532|ref|YP_005617723.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11134308|sp|P57268.1|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790868|sp|B8D8X1.1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790869|sp|B8D775.1|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp. (strain
APS)
gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 361
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 218/303 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M + +L+KL+ R +E++ +LTQK V +N ++ +E+ L I++ + ++K+
Sbjct: 1 MNNSILNKLKSLRNRYQEIEIMLTQKNVISNRENLKTLSKEYLKLSEIIKYFIEWEKLEV 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI +LND+E++ A +E+ K+ +E +I +L+LP+D NDK + FIEIR+ TG
Sbjct: 61 DIENVNILLNDVEIQGMAEEELYFFNKKKKALEKKINQLLLPEDPNDKHSCFIEIRSATG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDES++F +L RMY+R++E WK EI++ S SE GG+KEIIA+I G +LKFESG
Sbjct: 121 GDESSIFAGELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKITGRGACGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTS CTVAV+P + E IN +DL+IDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITHIPTG VV+CQ++RSQHKNKA AL IL AR+ +KL + + ++ MR++L+G+
Sbjct: 241 DSAIRITHIPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKDRQESSSMRKILLGT 300
Query: 301 VQK 303
++
Sbjct: 301 GER 303
>gi|244539233|dbj|BAH83276.1| peptide chain release factor 1 [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 367
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 212/300 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R KE++ LL+ V N K + RE+ L I+ ++ ++++ +
Sbjct: 10 MKVSILSKLEALQERYKEIELLLSDANVIANQKYFKILSREYVQLNDIITHFSAWQELQK 69
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+I T K ++ D E+ A +E+ K+ IE +I+ L+LPKD D+ FIEIRAGTG
Sbjct: 70 NIATVKLLIADPEVSEIADEELKDLLKKNESIEHQIQLLLLPKDSEDEYPCFIEIRAGTG 129
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+A+FV DL RMY R++E W +I++ S E GGYKEIIA+I G Y +LKFESG
Sbjct: 130 GNEAAIFVGDLFRMYSRYAEERSWNVDILNVSEGEQGGYKEIIAKINGNGAYGRLKFESG 189
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAVIPE E + IN +DL+IDT+R+SGAGGQH+N T
Sbjct: 190 GHRVQRVPETESQGRIHTSACTVAVIPELPEADLPEINMSDLKIDTFRSSGAGGQHVNTT 249
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+R+THIPTGIVV+CQ++RSQHKNKA A+K+L RI + ++Q+ A RR L+GS
Sbjct: 250 DSAIRVTHIPTGIVVECQDERSQHKNKAKAIKVLSNRIYAIEKAKRQAQKASQRRNLLGS 309
>gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
Length = 363
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 210/302 (69%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + Y K +E+S L +V + Y+ E
Sbjct: 1 MKASIVAKLEGLVERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAVE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AK ML +D EM+ A++E+ AK + + E++ L+LPKD ND RN +IEIRAG
Sbjct: 61 DLESAKMMLEDDDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F +L RMY ++ + W+ EI++ + SE GGYKE+IA+I G Y +KFE
Sbjct: 121 AGGDEAAIFAGNLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGRIHTSACTV V+PE E E I INPADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIPTG VV+CQ+ RSQHKN+A A+ +L AR++ ++ + + +RR L+
Sbjct: 241 KTDSAVRLTHIPTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVIRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>gi|376259649|ref|YP_005146369.1| peptide chain release factor 1 [Clostridium sp. BNL1100]
gi|373943643|gb|AEY64564.1| peptide chain release factor 1 [Clostridium sp. BNL1100]
Length = 359
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ R +E+ L+ +V NN +Y K ++E+S L IV+ Y Y K+ ++I
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVTKEIEE 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+E+L+ D + R E A++++ I+ ++K LI+PKD ND +N+ +EIR G GG
Sbjct: 61 ARELLDQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF L R +++E+ WK+EI+ + +E+GG+KE++ I G YS+LKFESGV
Sbjct: 121 EEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTS TVAV+PE +E+ D++INP+DLRIDTYRASGAGGQHINKTD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLPEVEEV-DVDINPSDLRIDTYRASGAGGQHINKTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITH+PTGIVV CQ++RSQHKNK A+KIL +++ + +Q + A+ R+ +G+
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
Length = 356
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 215/312 (68%), Gaps = 11/312 (3%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKI------ 58
M +KL+ +R E++ L+ +V + + Y + + H+ L I+ +Y YK++
Sbjct: 1 MFAKLDSIEERYAEIEQELSSSDVLQDQQRYAELAKAHADLGEIISVYREYKEVLTGIEE 60
Query: 59 NEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
N+D+++ D E+R A +E++ + R ++ ++KL+LPKD D +NI +EIRAG
Sbjct: 61 NQDVLSD----GDQELRELAKEELSALETRQEELHARLQKLLLPKDPMDDKNIILEIRAG 116
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+ALFV DLLRMY R++E +WK E+++ + GG KE+IA I G +VYS+LK+E
Sbjct: 117 TGGEEAALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASISGASVYSRLKYE 176
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP TE+QGRIHTSA TVA++PEA+E+ D+ I+P++LRID +RASG GGQ +N
Sbjct: 177 SGVHRVQRVPSTESQGRIHTSAVTVAILPEAEEV-DVEIDPSELRIDYFRASGPGGQSVN 235
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITHIP+G+VV CQ+++SQHKNKA A+K+L +RI +K E + RR +
Sbjct: 236 TTDSAVRITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRILKAKQEEAKKELDASRRSQV 295
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 296 GSGDRSERIRTY 307
>gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29427417|sp|P59456.1|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 362
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 211/302 (69%), Gaps = 4/302 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M+ KLE +R +E++ +L+ + V +N + + + +E+ L I + +K N
Sbjct: 1 MKSSMMKKLESLHRRYEEIESMLSDRTVISNQEKFRELSQEYLKLSDINYCFVQWKNCNH 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+I K +L D E+ + A E+ + K++ IE EI+ L+LP D ND++N F+EIR+ +G
Sbjct: 61 DVIETKLLLLDSELHDVAEQELQMLSKKMKKIETEIQVLLLPCDPNDQQNCFLEIRSASG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A+F DL RMYI++SE WK II + S GGYK+II +I G Y KLKFESG
Sbjct: 121 GDEAAIFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIP--EADEIEDININPADLRIDTYRASGAGGQHIN 238
HRVQRVPKTE+QGR+HTS C VAVIP EIE +NIN DL+IDT+R+SGAGGQH+N
Sbjct: 181 GHRVQRVPKTESQGRVHTSTCIVAVIPVVPKKEIEKVNIN--DLKIDTFRSSGAGGQHVN 238
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITHIP+G VV+CQ++RSQHKNKA AL +L++RIK ++L Q+ A RR L+
Sbjct: 239 TTDSAVRITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAIQRRDLL 298
Query: 299 GS 300
G+
Sbjct: 299 GT 300
>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
gi|259585220|sp|C4XIQ1.1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
Length = 357
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 209/298 (70%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE ++ ++L+ L+ +V ++ + + K + HS L +V + YKKI +D+
Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+EM D E+R A E K+ ++E +K L+LPKD D++NI +EIRAGTGGD
Sbjct: 61 NQEMAQDPDPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S+S + GG+KE+IA I G VYS+LK+ESG H
Sbjct: 121 EAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ D+ I+P +LRID YR+SG GGQ +N TDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMPEAEEV-DVAIDPNELRIDVYRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVR+THIP+G+VV CQ+++SQHKNKA ALK+L +R+ + +Q++ RR +G+
Sbjct: 240 AVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGT 297
>gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Sulfurimonas gotlandica GD1]
gi|373867420|ref|ZP_09603818.1| peptide chain release factor 1 [Sulfurimonas gotlandica GD1]
gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Sulfurimonas gotlandica GD1]
gi|372469521|gb|EHP29725.1| peptide chain release factor 1 [Sulfurimonas gotlandica GD1]
Length = 355
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/297 (52%), Positives = 206/297 (69%), Gaps = 2/297 (0%)
Query: 5 MLS-KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
MLS KL F R EL LL+ ++ ++IK +E S L PIVE YK I + I
Sbjct: 1 MLSDKLNPFINRYNELSELLSSPDITSDIKRMTALSKEQSSLLPIVEKAKEYKSIIKQIA 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KEML D EM + A +E+ + +I IE IK L+LPKD+ND RNI +E+RAG GGDE
Sbjct: 61 ETKEMLGDPEMIDMAKEELKELEPQIPLIEESIKLLLLPKDQNDDRNIIVELRAGAGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+A+FV DL Y R++E WK E++S S S+ GG+KE+IA I G VYS+LK+E G+HR
Sbjct: 121 AAIFVGDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALIKGDQVYSRLKYEGGIHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGR+HTSA TVAV+PE D++E + IN DL+ID R+SG GGQ +N TDSA
Sbjct: 181 VQRVPETESQGRVHTSAITVAVMPEVDDVE-VVINENDLKIDVMRSSGCGGQSVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PTG+VV Q+ +SQHKNK A+K+L AR+ D +++E QS ++ R +GS
Sbjct: 240 VRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQEAQSKDSEARLAQVGS 296
>gi|420154949|ref|ZP_14661821.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
gi|394759930|gb|EJF42579.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
Length = 360
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 211/310 (68%), Gaps = 5/310 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M L F RL+EL+ + V + K Y + ++E+ L PIVE Y Y K + +
Sbjct: 1 MFENLTVFVNRLEELNQRMFDPVVAADAKGYAELMKEYKNLEPIVEKYREYLKAVQTVED 60
Query: 65 AKEMLND----LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ EML + EM+ E++ AK ++ E+K L+LP+D ND+RN+ +EIR G G
Sbjct: 61 STEMLGESGLEREMKEMIQQELDDAKDQVERTAEELKILLLPRDPNDERNVIMEIRGGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF L RMY ++ R WK E+++ + +E+GGYKEI +I G YS+LK+ESG
Sbjct: 121 GEEAALFSARLFRMYSMYATRRGWKTELLNVNETELGGYKEISFQITGDGAYSRLKYESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP+TETQGRIHTS TVAV+PE D++E I INP DL+IDTYRASGAGGQH+NKT
Sbjct: 181 VHRVQRVPETETQGRIHTSTATVAVLPEVDDVE-IEINPTDLQIDTYRASGAGGQHVNKT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SA+RITH+PTG VV+CQ++RSQ KNK A+K+L +R+ ++K REQ + A+ R+ +G+
Sbjct: 240 ESAIRITHLPTGTVVECQDERSQFKNKDKAMKVLRSRLYEAKQREQDAQVAQQRKSQVGT 299
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 300 GDRSERIRTY 309
>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
gi|226739102|sp|B5YDB2.1|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
Length = 367
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 226/313 (72%), Gaps = 4/313 (1%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKI-- 58
++ L+L KLE+ KR KE++ LLT++E+ +++ Y ++E + + IVE ++ YKK+
Sbjct: 2 LQKLVLDKLEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLLK 61
Query: 59 -NEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
ED+ + D ++R+ A E+ +K++ IE ++K L+LPKD ND++NI +EIRA
Sbjct: 62 EREDLEVMTKEEQDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEIRA 121
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
GTGG+E+ALF DL RMY+ ++++ WK EI+S + + +GGYKEII + G YS+LKF
Sbjct: 122 GTGGEEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRLKF 181
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
ESGVHRVQRVP TE+ GRIHTS TVAV+PE +E+ D+ I+P DLRI+T+R+ GAGGQH+
Sbjct: 182 ESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEV-DVEIDPKDLRIETFRSGGAGGQHV 240
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
NKT+S VRITHIP+GIVVQCQ++RSQH+N+ A+K+L AR+ + RE+++ A RR
Sbjct: 241 NKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQQ 300
Query: 298 IGSVQKKSPLNIF 310
+G+ ++ + +
Sbjct: 301 VGTGERSEKIRTY 313
>gi|366163504|ref|ZP_09463259.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
Length = 360
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 213/309 (68%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +L+ R +E++ L+ V N +Y K ++EH+ L +V Y YKK+ ++I
Sbjct: 1 MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60
Query: 65 AKEMLNDL---EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
AKE+LND + R E+ A++ + I+ E+K L+LPKD ND++++ +EIR G GG
Sbjct: 61 AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF L RMY R++ER WK E++ + +EIGG+KE++ I G +SKLKFESGV
Sbjct: 121 EEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQR+P+TE GRIHTS TVAV+PE +E+ D++INP DLRIDTYRASGAGGQHINKTD
Sbjct: 181 HRVQRIPETEANGRIHTSTVTVAVLPEVEEV-DVDINPNDLRIDTYRASGAGGQHINKTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITHIPTG+VV CQ+ RSQ+KNK A+++L +++ + +Q S A+ R+ +G+
Sbjct: 240 SAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSEIAQARKGQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio alaskensis G20]
gi|119361534|sp|Q30X18.1|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78220429|gb|ABB39778.1| peptide chain release factor 1 [Desulfovibrio alaskensis G20]
Length = 357
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 221/308 (71%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE ++ ++L+ L+ EV + + Y K + HS L IVE++ Y+++NE++
Sbjct: 1 MFAKLEHLERQFEDLEQQLSSPEVFGDQERYRKLTKAHSDLKEIVEVFRVYRQLNEELAG 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEML +D E++ A +EI+ +KR+ ++E E+K L+LPKD D++N+ +EIRAGTGG+
Sbjct: 61 NKEMLRDSDPEIQAMAREEIDAIEKRLPEMEHELKLLLLPKDPLDEKNVVLEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY+R++E W+ E++S S ++ GG+KEII I G VYS++KFESG H
Sbjct: 121 EAALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVYSRMKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TETQGRIHTSA TVAV+PEADE+E +++ P DLR D YR+SG GGQ +N TDS
Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMPEADEVE-LDMKPEDLRFDVYRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVR+THIPTGI V CQ+++SQHKNKA LKIL +R+ ++ ++ A+ RR L+G+
Sbjct: 240 AVRVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHEELAEQRRSLVGTGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSGRIRTY 307
>gi|410465614|ref|ZP_11318843.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981343|gb|EKO37925.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 357
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 209/298 (70%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE ++ ++L+ L+ +V ++ + + K + HS L +V + YKKI +D+
Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+EM D E+R A E K+ ++E +K L+LPKD D++NI +EIRAGTGGD
Sbjct: 61 NQEMAQDPDPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S+S + GG+KE+IA I G VYS+LK+ESG H
Sbjct: 121 EAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ D+ I+P +LRID YR+SG GGQ +N TDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMPEAEEV-DVAIDPNELRIDVYRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVR+THIP+G+VV CQ+++SQHKNKA ALK+L +R+ + +Q++ RR +G+
Sbjct: 240 AVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQDKQRAEQEAARRSQVGT 297
>gi|376295460|ref|YP_005166690.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
Length = 355
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 216/302 (71%), Gaps = 11/302 (3%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KLE+ ++ L+ L + ++ N+ + Y K + H+ L +VE + YK++++++
Sbjct: 1 MFGKLEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDD 60
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+EMLND E+R A EI+ + + +IE ++K L+LPKD D++NI +EIRAGTGGD
Sbjct: 61 NREMLNDADPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTGGD 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E N+WK E +S + + GGYKE+IA I G VYSKLK+ESG H
Sbjct: 121 EAALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ DI++ P DLR+D +R+SG GGQ +N TDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMPEAEEV-DIDLRPEDLRVDVFRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI----KDSKLREQQSNTAKMRRLLI 298
A+R+THIP+G++V CQ+++SQHKNKA ALK+L +R+ +D EQ++N RR +
Sbjct: 240 AIRVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQEAN----RRSQV 295
Query: 299 GS 300
GS
Sbjct: 296 GS 297
>gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
Length = 354
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 209/308 (67%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL + + +EL+ LL+ V ++ + + REH+ L PIV Y Y+K E +
Sbjct: 1 MLSKLTAVADKYRELEALLSDPTVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAE 60
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEML D EM+ L+EI A+ + E+ L+LP+D ND +N+ +EIR G GG+
Sbjct: 61 DKEMLAEADAEMKELLLEEIAAAEAERERLAKELPILLLPRDPNDDKNVIVEIRGGVGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF L RMY R++ER W+ EI+S + +EIGG+KEI + G YSKLK+ESG H
Sbjct: 121 EAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQR+P TE+ GRIHTSA TVAV+PEA+++E + I+P DLRIDTY ASGAGGQ++N+T++
Sbjct: 181 RVQRIPVTESGGRIHTSAVTVAVLPEAEDVE-VTIDPNDLRIDTYCASGAGGQYVNRTET 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+RITH+PTGIVVQCQ+++SQ KNK A+K+L ARI D +EQ A RR +GS
Sbjct: 240 AIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQEQADAVAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
Length = 363
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 209/302 (69%), Gaps = 3/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M+ +M K+E R EL+ LL+ + + + Y K VREHS L IV +Y +YK INE
Sbjct: 1 MEGIMFEKIEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I + +L D E++ A DEI + D+E +++ L++PKD+ D++N+ +EIRAG
Sbjct: 61 QIEESISLLKNEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+ALF DL RMY R++E WK E+++ S + +GG KEI+A I G YS K+E
Sbjct: 121 TGGDEAALFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSA TVAV+PEA+E+E ++I+P ++++D YR++G GGQ +N
Sbjct: 181 SGTHRVQRVPVTEAQGRIHTSAVTVAVLPEAEEVE-LDIDPGEIKVDVYRSTGPGGQSVN 239
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRITH+PTG+VV CQ+++SQ KNK+ A+K+L AR+ D+ EQ + R+ I
Sbjct: 240 TTDSAVRITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARLLDNITMEQNQKRSAERKHQI 299
Query: 299 GS 300
GS
Sbjct: 300 GS 301
>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
Length = 361
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 224/312 (71%), Gaps = 3/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K ++ KLEK +++ K ++ L++ EV ++K Y + REH L + E Y YK++
Sbjct: 2 LKKELIDKLEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQR 61
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
++ AKE+L + E++ A +EI + RI ++E ++K L++PKD ND +N+ +EIRAG
Sbjct: 62 ELNEAKELLKSPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAG 121
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+ALFV DLLRMY +++E WKF I++ + + +GGYKE+IA I G YS+LK+E
Sbjct: 122 TGGEEAALFVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYE 181
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQR+P TE+ GRIHTS TVAV+PEADE D+ INP DL+I+T+RASGAGGQ++N
Sbjct: 182 SGVHRVQRIPVTESGGRIHTSTATVAVLPEADEA-DVEINPQDLKIETFRASGAGGQYVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
T++AVRITH PTGIVV CQ++RSQ +NK ALKIL A++KD R+++ A+ R+ +
Sbjct: 241 TTETAVRITHTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREEIARERKEQV 300
Query: 299 GSVQKKSPLNIF 310
G+ ++ + +
Sbjct: 301 GTGERSEKIRTY 312
>gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
Length = 354
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 215/312 (68%), Gaps = 11/312 (3%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKK----INE 60
MLSKL + + +EL+ LL+ V +++ + + REH+ L PIVE Y Y++ I+E
Sbjct: 1 MLSKLAAVADKYRELETLLSDPSVMADMEAWQRYTREHAALTPIVEAYQAYRRALAIIDE 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D KEML+ D EM+ +EI A+ + E+ L+LP+D ND++N+ +EIR G
Sbjct: 61 D----KEMLSEADAEMKAMLTEEIAAAEAERDRLAAELPILLLPRDPNDEKNVIVEIRGG 116
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GG+E+ALF L RMY+R++ER W+ E++S + +EIGG+KEI + G YSKLK+E
Sbjct: 117 VGGEEAALFAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLVSGTAAYSKLKYE 176
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQR+P TE+ GRIHTSA TVAV+PEA+E+E + I+P DLRIDTY ASGAGGQ++N
Sbjct: 177 SGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEEVE-VTIDPNDLRIDTYCASGAGGQYVN 235
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+T++A+RITHIPTGIVVQCQ+++SQ KN+ A+K+L AR+ D +EQ A RR +
Sbjct: 236 RTETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQEQADAVAADRRSQV 295
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 296 GSGDRSERIRTY 307
>gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
19965]
gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
19965]
Length = 359
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 213/310 (68%), Gaps = 4/310 (1%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
+ KL+ R L+ L+ V N + + K +EH+ L IV LY YKK+ E
Sbjct: 1 MKTDKLQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQN 60
Query: 64 TAKEMLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
A E+LND E+ A +++ A+K I +E ++ L++PKD ND RN+ +EIRAGTG
Sbjct: 61 AALEILNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALFV DLL+MY++F+E WK I+ + +++GGY+E+I I G N YS LKFESG
Sbjct: 121 GDEAALFVADLLKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQR+P+TE+ GR+HTSA TVAV+PEA+++ DI I+ D+R+D YRASGAGGQHINKT
Sbjct: 181 VHRVQRIPETESSGRVHTSAVTVAVLPEAEDV-DIEISKEDIRVDVYRASGAGGQHINKT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
SA+RITH+PTGIVV CQN+R Q +N+ A++IL AR+ D LR+ +S TA+ R+ +GS
Sbjct: 240 SSAIRITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGS 299
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 300 GDRSERIRTY 309
>gi|407775618|ref|ZP_11122911.1| peptide chain release factor 1 [Thalassospira profundimaris WP0211]
gi|407281295|gb|EKF06858.1| peptide chain release factor 1 [Thalassospira profundimaris WP0211]
Length = 360
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/311 (48%), Positives = 211/311 (67%), Gaps = 7/311 (2%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
L L KLE ++R EL+ LL+ E+ + + K REH+ L P+VE YKK+ D+
Sbjct: 3 LDLGKLEGVTRRFDELNSLLSSGELDGD--GFSKLSREHAELAPVVEAIEAYKKLLNDLE 60
Query: 64 TAKEML----NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
A+E+L +D +MR A E + ++ + E ++K +++PKD D +N +EIRAGT
Sbjct: 61 EAEEILADPQSDRDMREMAEAEKYDIQDKLPEAERQMKLMLIPKDTADTKNAILEIRAGT 120
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GG+E+ALF DL RMY R++E WKFE + S +++GG+KE+I + G +V+++LKFES
Sbjct: 121 GGEEAALFAADLYRMYQRYAEGRGWKFEQMDASENDLGGFKEVIVNVSGTDVFARLKFES 180
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
GVHRVQRVP TE GRIHTSA TVAV+PEA+E+ DI I+P DLRIDTYR+ GAGGQH+N
Sbjct: 181 GVHRVQRVPVTEGGGRIHTSAATVAVLPEAEEV-DIKIDPKDLRIDTYRSQGAGGQHVNT 239
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
TDSAVRITHIPTG+V Q +SQHKNK A+K+L++R+ D + + S A R+ +G
Sbjct: 240 TDSAVRITHIPTGVVAASQEAKSQHKNKEKAMKMLMSRLYDQERESKDSERAADRKSQVG 299
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 300 SGDRSERIRTY 310
>gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
98-5491]
gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
98-5491]
gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
98-5491]
gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
98-5491]
Length = 356
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/297 (52%), Positives = 208/297 (70%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ SKL+ F R E+ LL Q E+ ++IK + +E S L +V+ Y K E I
Sbjct: 1 MLASKLKPFIDRYDEISNLLIQTEILSDIKRMTELSKEQSDLEKLVQKSKQYLKNLESIE 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
K +L+D E+ + A +EI A+ ++E EIK L+LPKD ND++NI++E+RAGTGGDE
Sbjct: 61 ENKGLLDDKELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + YIR++E WK EIIS S + +GGYKE+IA I G YS+LKFE G HR
Sbjct: 121 AGIFVGDLFKAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E + INP DLRI+ +RA G GGQ +N TDSA
Sbjct: 181 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VVINPNDLRIEVFRAGGHGGQCVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITHIPTGI V Q+++SQHKNK ALKIL ARI +++L Q A+ R+ +GS
Sbjct: 240 VRITHIPTGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGS 296
>gi|420406208|ref|ZP_14905379.1| peptide chain release factor 1 [Helicobacter pylori CPY6311]
gi|393024229|gb|EJB25340.1| peptide chain release factor 1 [Helicobacter pylori CPY6311]
Length = 352
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 208/297 (70%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E SF+ I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSTEVISDIKKLTELSKEQSFIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
Length = 355
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 202/293 (68%), Gaps = 3/293 (1%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L++ + R EL+ + + +++ R+++ L P+ ++ K + E+I +E
Sbjct: 7 RLDQIANRFAELEARMASGTLEG--EEFVAASRDYAELEPVAKIAGEVKAMREEIEGLEE 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML D EM+ A +E++ ++ + + E + +LP+D+ D + +EIRAGTGGDE+ALF
Sbjct: 65 MLADPEMKAMAEEELSAIREALPEKERSLAIALLPRDRADAKPAMLEIRAGTGGDEAALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY +++ W+ E +S S SE+GG+KEI+A + G V++KLKFESGVHRVQRV
Sbjct: 125 AGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVANVSGQGVFAKLKFESGVHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P TE+ GRIHTSA TVAV+PE DE+ D+ I+P DL+IDTYRASGAGGQH+N TDSA+RIT
Sbjct: 185 PVTESGGRIHTSAATVAVLPEPDEV-DVQIDPGDLKIDTYRASGAGGQHVNTTDSAIRIT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H PTG+VV CQ+ RSQHKN+ A+++L AR+ + E Q A+ R+ ++GS
Sbjct: 244 HEPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRDEAQGAEAEARKAMVGS 296
>gi|424864710|ref|ZP_18288613.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
gi|400759456|gb|EJP73638.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
Length = 361
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 210/312 (67%), Gaps = 2/312 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M M KL+ R E+ LL Q E N+I + +E + + PI ELY+ YK + +
Sbjct: 1 MHDSMTKKLDMLIDRQAEIQNLLIQPETSNDINLLTELNKEFADINPIAELYSEYKDLMQ 60
Query: 61 DIITAKEM--LNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I AK++ + D ++ A +++ + R +E ++K ++LPKD D + ++EIRAG
Sbjct: 61 VIEEAKQIIEMGDEDLMALAEEDLKNNQDRPAALEKQLKIMLLPKDSADDGSAYLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY R SER W E+++ +E GGYKE+ +++G VY LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRMSERENWTIEVLNLRPAEQGGYKEVSLKLVGKGVYKVLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SGVHRVQRVP+TE+QGRIHTS CTVA++PE + + +++I+ DLR+DT+RASGAGGQH+N
Sbjct: 181 SGVHRVQRVPETESQGRIHTSTCTVAILPEVEAVAEVSIDKNDLRVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSAVR+THIPTG+VV+CQ+ RSQHKNK AL +L A++K + EQQ+N A R++ +
Sbjct: 241 KTDSAVRLTHIPTGLVVECQDGRSQHKNKEKALSLLAAKLKQKEEDEQQANIASERKIQV 300
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 301 GTGDRSEKIRTY 312
>gi|365171434|ref|ZP_09361195.1| peptide chain release factor 1 [Synergistes sp. 3_1_syn1]
gi|363617719|gb|EHL69094.1| peptide chain release factor 1 [Synergistes sp. 3_1_syn1]
Length = 357
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 210/298 (70%), Gaps = 3/298 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
++ KL++ +EL+ + V N+ ++ ++H L PIV+ ++ Y+ + + I
Sbjct: 3 LIDKLKEIEASYRELELKMADPAVANDPQEMQTLGKKHVDLTPIVDAFSQYEAVLQGIAD 62
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
AKEM+N D EMR A +E+ ++R+ ++E +I+ L+LPKD ND +++ IEIR G GG+
Sbjct: 63 AKEMINGDDEEMRELAKEELAALEERVPELEKDIRVLLLPKDINDDKSVIIEIRGGAGGE 122
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF +L RMY RF+ER WK E+IS S + IGG+KEI+ R+ G +S LKFESGVH
Sbjct: 123 EAALFSANLFRMYTRFAERQRWKTEVISGSETGIGGFKEIVFRVDGTGAFSMLKFESGVH 182
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE GRIHTS TVAV+PEA ++ D+ I DL+IDTYR+SGAGGQH+N TDS
Sbjct: 183 RVQRVPETEASGRIHTSTATVAVLPEAADV-DVEIRSEDLKIDTYRSSGAGGQHVNMTDS 241
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
AVRITH+P+GIVV CQ++RSQ KN+A A++ L ++ D++L+ Q + A R+ +G+
Sbjct: 242 AVRITHLPSGIVVTCQDERSQIKNRAKAMQFLRTKLYDAELQRQNAEMAAERKGQVGT 299
>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
gi|122543160|sp|Q2N5U6.1|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
Length = 355
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/295 (49%), Positives = 206/295 (69%), Gaps = 5/295 (1%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
++L++ + R EL+ + + +++ + R+++ L P+ ++ K + E+I +
Sbjct: 6 TRLDQIANRFAELEARMASGTLEG--EEFVQASRDYAELEPVAKVAAEVKAMREEIGGLE 63
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
EML D EM+ A +E+ ++ + + E ++ +LPKD D + +EIRAGTGGDE+AL
Sbjct: 64 EMLADPEMKAMAQEELAAIREALPEKERQLAIAMLPKDSADNKPAMLEIRAGTGGDEAAL 123
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
F DL RMY RF+ WK E +S + SE+GG+KEI+A + G V++KLKFESGVHRVQR
Sbjct: 124 FAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLKFESGVHRVQR 183
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
VP+TE+ GRIHTSA TVAV+PE DE+ D+ I+ DL+ID YRASGAGGQH+N TDSAVRI
Sbjct: 184 VPETESGGRIHTSAATVAVLPEPDEV-DVQIDDKDLKIDIYRASGAGGQHVNTTDSAVRI 242
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQ-QSNTAKMRRLLIGS 300
TH+PTGIVVQ Q++RSQHKNKA A+++L R+ D LREQ Q A R+ ++GS
Sbjct: 243 THLPTGIVVQQQDERSQHKNKAKAMQVLRTRLYD-HLREQSQGEEAAARKAMVGS 296
>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
HTCC2654]
gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
Length = 351
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 210/295 (71%), Gaps = 5/295 (1%)
Query: 6 LSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITA 65
L KL+ ++R + L+ ++Q + I + RE++ L P+VE ++++ DI A
Sbjct: 4 LDKLDAITQRFQFLEAKMSQGLSGDEIAEVG---REYAELKPVVEEIAAFRQLLSDIEDA 60
Query: 66 KEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
+ ML+D EMR A DE+ ++R+ +E ++ +LP+D D R +EIR GTGGDE++
Sbjct: 61 EAMLSDPEMRELAEDELPGLRERLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGDEAS 120
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
LF DLLRMY R++E WKF+ + +SL+E+GG KE++AR+ G V+++LKFESGVHRVQ
Sbjct: 121 LFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVHRVQ 180
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP+TE+ GRIHTSA TVAV+PEA+++ DI+I+PAD+RIDT RASGAGGQH+N TDSAVR
Sbjct: 181 RVPETESGGRIHTSAATVAVLPEAEDV-DIHIDPADIRIDTMRASGAGGQHVNTTDSAVR 239
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
ITHIPTGIVV +++SQH+N+ A+++L R+ D++ + A R+ +GS
Sbjct: 240 ITHIPTGIVV-TSSEKSQHRNREIAMQVLKTRLFDAERQRAHDERASARKAQVGS 293
>gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
gi|384154795|ref|YP_005537610.1| peptide chain release factor 1 [Arcobacter butzleri ED-1]
gi|166977359|sp|A8EQZ4.1|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
gi|345468349|dbj|BAK69800.1| peptide chain release factor 1 [Arcobacter butzleri ED-1]
Length = 355
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL+ F R +E++ LL E+ ++IK +E S + PIV Y K+ EDI
Sbjct: 1 MLKDKLQPFINRFEEINQLLMSSEITSDIKRMTDLSKEQSSIQPIVSKAKEYIKVLEDIE 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
K ML+D E+ + A +E+ + R ++E EIK L++PKD ND RNI++E+RAGTGGDE
Sbjct: 61 ENKLMLDDPELGDLAKEELKELETRKPELEEEIKVLMIPKDPNDDRNIYLELRAGTGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+A+FV DL R Y+R++E N WK EI+S S SE GGYKEI+ + G +VYSKLKFE G HR
Sbjct: 121 AAIFVGDLFRAYLRYAENNGWKVEIMSSSDSESGGYKEIVILVKGDHVYSKLKFEGGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP TE+QGR+HTSA TVAV+PE D++E I IN DL+ID RASG GGQ +N TDSA
Sbjct: 181 VQRVPATESQGRVHTSAITVAVMPEVDDVE-IEINENDLKIDVMRASGNGGQSVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIP+GIVV Q+ +SQHKNK ALK+L A++ + ++ ++ R+ +G+ +
Sbjct: 240 VRITHIPSGIVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKKMEAEGATRKEQVGTGDR 299
Query: 304 KSPLNIF 310
+ +
Sbjct: 300 SGRIRTY 306
>gi|418019208|ref|ZP_12658729.1| peptide chain release factor 1 [Candidatus Regiella insecticola
R5.15]
gi|347605454|gb|EGY29899.1| peptide chain release factor 1 [Candidatus Regiella insecticola
R5.15]
Length = 293
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/233 (58%), Positives = 183/233 (78%)
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+DLEMR A DE+ AK R +E +++ L+LP+D +D+R+ F+EIRAGTGGDE+A+F
Sbjct: 1 MLDDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTGGDEAAIF 60
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
D+ RMY R++E WK E+++ + E GGYKE+I +I G VY +LKFESG HRVQRV
Sbjct: 61 AGDMFRMYSRYAETRRWKMEVMNINEGEQGGYKEVITKITGNGVYGQLKFESGGHRVQRV 120
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
PKTE+QGRIHTSACTVAV+P E E + I+ +DLRIDT+R+SGAGGQH+N TDSA+RIT
Sbjct: 121 PKTESQGRIHTSACTVAVMPVLPETEVLEISDSDLRIDTFRSSGAGGQHVNTTDSAIRIT 180
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTGIVV+CQ++RSQHKNKA A +L ARI++++ +++Q A RR L+GS
Sbjct: 181 HLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQASERRNLLGS 233
>gi|405983472|ref|ZP_11041778.1| peptide chain release factor 1 [Slackia piriformis YIT 12062]
gi|404389078|gb|EJZ84159.1| peptide chain release factor 1 [Slackia piriformis YIT 12062]
Length = 352
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/306 (49%), Positives = 204/306 (66%), Gaps = 1/306 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KLEK K +EL L V + K+Y + +E++ P+VE Y + +DI
Sbjct: 1 MRDKLEKIIKGYEELQTKLGDPAVLADQKEYTRLSKEYANQGPLVEKAREYVQACDDIAD 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
AKEML+D +M+ FA + I+ A+ ++ +E +IK +++P D D +NI +EIRA GGDE+
Sbjct: 61 AKEMLDDPDMKEFAQETISAAESKLPALEEDIKFMLIPSDPADDKNIIVEIRAAAGGDEA 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
A+F DL +MY+RF E++ WK E + S SE GGYKEI ++ G VYS +KFESGVHRV
Sbjct: 121 AIFAGDLYKMYMRFCEQHRWKVETMDVSASEAGGYKEIQFKVKGDKVYSVMKFESGVHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVPKTE+QGRIHTS TVAV+PEADEI DI IN DLRID YRA G GGQ +N TDSAV
Sbjct: 181 QRVPKTESQGRIHTSTATVAVLPEADEI-DIEINENDLRIDVYRAGGPGGQCVNTTDSAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+P+G+VVQ Q+ +SQ +NK A+ +L AR+ + L EQQ+ R IGS +
Sbjct: 240 RITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQAAEGAERLAQIGSGDRA 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 EKIRTY 305
>gi|375336292|ref|ZP_09777636.1| peptide chain release factor 1 [Succinivibrionaceae bacterium WG-1]
Length = 363
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 214/316 (67%), Gaps = 10/316 (3%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K +++KLE ++R +E+ LL E+ N+ + +E+S L IV+ + NY ++
Sbjct: 2 LKQSIITKLETLAERYEEVQALLADPEIANDQNRFRDLNKEYSQLETIVKSFKNYTQLES 61
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ A+ ML+ D EMR A +EI+ K+ + E +I+ L+LP+D D N F+EIRAG
Sbjct: 62 DLTEAQAMLDGDDAEMREMAAEEIDSIKENLEKSEKDIQILLLPRDPKDDNNAFVEIRAG 121
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGGDE+A+F DL R+Y +++E+ W EI++ S E GG+KE+I +I G VY +KFE
Sbjct: 122 TGGDEAAIFAGDLFRLYSKYAEKRNWSVEIMNCSEGEHGGFKEMICKISGDGVYGTMKFE 181
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TETQGR+HTSACTV V PE E E I D+RIDT+RASGAGGQHIN
Sbjct: 182 SGGHRVQRVPETETQGRVHTSACTVMVFPEVPESEAPEILAKDIRIDTFRASGAGGQHIN 241
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI----KDSKLREQQSNTAKMR 294
KTDSA+RITH P+G+VV+CQ++RSQHKNKA A +L +R+ ++ K++EQ A+ R
Sbjct: 242 KTDSAIRITHFPSGLVVECQDERSQHKNKAKAFAVLASRLARLEEEKKMKEQ----AEQR 297
Query: 295 RLLIGSVQKKSPLNIF 310
+ ++ S + + +
Sbjct: 298 QSILSSGDRSDRIRTY 313
>gi|400406570|ref|YP_006589318.1| peptide chain release factor 1 [secondary endosymbiont of
Heteropsylla cubana]
gi|400364823|gb|AFP85890.1| peptide chain release factor 1 [secondary endosymbiont of
Heteropsylla cubana]
Length = 360
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 211/300 (70%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ KL +R +E++ LL + + ++ +C +EH+ L I + + +K++
Sbjct: 1 MHSSIIKKLTTLQERREEIEVLLNELSIVSDQVRFCSLSKEHTQLLAITQCFQKWKQLKT 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI ++L+DLEMR+ A +EI K ++E E++ L+L +D ND+R F+EIRAGTG
Sbjct: 61 DINIITDLLHDLEMRDIAQEEILKLKNNQQELEKELQMLLLSRDPNDERGCFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+E+ALF L RMY R++E+ WK +II+ + E GG+KE+IA+I Y LKFESG
Sbjct: 121 GNEAALFAGLLFRMYNRYAEKQGWKIDIINANDGEHGGFKEVIAKISHSGAYGLLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGR+HTS+CT+AV+PE E + I+ DLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPNTESQGRVHTSSCTIAVMPEIPEADLPKIHTNDLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG+VV+CQ++RSQHKNKA AL +L AR++ ++++ +Q + RR L+GS
Sbjct: 241 DSAIRITHLPTGLVVECQDERSQHKNKAKALGVLSARLQANEIQRRQQQESSTRRNLLGS 300
>gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII
345-E]
gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII
345-E]
Length = 359
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 212/306 (69%), Gaps = 4/306 (1%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL+ R L+ L+ V N + + K +EH+ L IV LY YKK+ E A E
Sbjct: 5 KLQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALE 64
Query: 68 MLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+LND E+ A +++ A+K I +E ++ L++PKD ND RN+ +EIRAGTGGDE+
Sbjct: 65 ILNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEA 124
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALFV DLL+MY++F+E W+ I+ + +++GGY+E+I I G N YS LKFESGVHRV
Sbjct: 125 ALFVADLLKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRV 184
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QR+P+TE+ GR+HTSA TVAV+PEA+++ DI I+ D+R+D YRASGAGGQHINKT SA+
Sbjct: 185 QRIPETESSGRVHTSAVTVAVLPEAEDV-DIEISKEDIRVDVYRASGAGGQHINKTSSAI 243
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITH+PTGIVV CQN+R Q +N+ A++IL AR+ D LR+ +S TA+ R+ +GS +
Sbjct: 244 RITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGSGDRS 303
Query: 305 SPLNIF 310
+ +
Sbjct: 304 ERIRTY 309
>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
Length = 359
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 145/309 (46%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ R +E+ L+ +V NN +Y K ++E+S L IV+ Y Y K++++I
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+E+L+ D + R E A++++ I+ ++K LI+PKD ND +N+ +EIR G GG
Sbjct: 61 ARELLDQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF L R +++E+ WK+EI+ + +E+GG+KE++ I G YS+LKFESGV
Sbjct: 121 EEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTS TVAV+PE +E+ D++INP DLRIDTYRASGAGGQHINKTD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLPEVEEV-DVDINPNDLRIDTYRASGAGGQHINKTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITH+P+GIVV CQ++RSQHKNK A+KIL +++ + +Q + A+ R+ +G+
Sbjct: 240 SAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
Length = 355
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 204/293 (69%), Gaps = 3/293 (1%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L++ + R EL+ + + + ++ + R+++ L P+ ++ K E+I + ++
Sbjct: 7 RLDQIAHRFAELEARMASGTLEGD--EFVQASRDYAELEPVAKVAAEVKAAREEIASLED 64
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML D EM+ A +E+ +KR+ E ++ +LP+D D + +EIRAGTGGDE+ALF
Sbjct: 65 MLADPEMKAMAEEELAELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGGDEAALF 124
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DL RMY R++ WK E +S + SE+GG+KEI+A + G NV++KLKFESGVHRVQRV
Sbjct: 125 AGDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGVHRVQRV 184
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+ GRIHTSA TVAV+PE DE+ D+ ++P +L+IDTYRASGAGGQH+N TDSA+RIT
Sbjct: 185 PETESGGRIHTSAATVAVLPEPDEV-DVQLDPTELKIDTYRASGAGGQHVNTTDSAIRIT 243
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
H+PTG VV CQ+ RSQHKNK A+++L R+ D++ Q A+ R+ ++GS
Sbjct: 244 HLPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQREATQGAEAEARKAMVGS 296
>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium succinatutens
YIT 12067]
Length = 355
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL+ R +L+ ++ EV + ++ K + H+ L PIV Y Y+ + +
Sbjct: 1 MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60
Query: 65 AKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+E+L +D E+ A +E+ K +I + E ++ L+LP D ND +N+ +EIR G GG
Sbjct: 61 AEELLAAGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ALF L RMY+R++E W+ E++ + +E+GG+KE++ +I G +VYS++KFESGV
Sbjct: 121 DEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE+QGR+HTS TVAV+PEA+E+ D+ INPADLR+DTYRA GAGGQ++NKT+
Sbjct: 181 HRVQRVPETESQGRVHTSTVTVAVLPEAEEV-DVEINPADLRVDTYRAGGAGGQYVNKTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITHIPTGIV QCQ+++SQ KN+ +++L ARI + EQ++ TA+ R+ +G+
Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARILEQAQEEQRAATAEDRKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|425788711|ref|YP_007016631.1| peptide chain release factor 1 [Helicobacter pylori Aklavik117]
gi|425627026|gb|AFX90494.1| peptide chain release factor 1 [Helicobacter pylori Aklavik117]
Length = 352
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV N+IK + +E S + I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVINDIKKLTELSKEQSSIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|389580733|ref|ZP_10170760.1| peptide chain release factor 1 [Desulfobacter postgatei 2ac9]
gi|389402368|gb|EIM64590.1| peptide chain release factor 1 [Desulfobacter postgatei 2ac9]
Length = 353
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 216/308 (70%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M+ KL+ +R +++ LL+ V + K Y ++EH L IV ++ Y+ ++
Sbjct: 1 MIQKLKGIEERFIKIEHLLSDPAVMADQKKYQGYLKEHGELNKIVPVFREYEGAEGELKE 60
Query: 65 AKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
AKE+L +D ++R A +EI + + RI + ++ L++PKD D++N+ +EIRAGTGG+
Sbjct: 61 AKELLKDSDPDIRAMAKEEIPVLESRISQLHEQLNILLMPKDPRDEKNVILEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ +F DL RMY R+ E +WK EII ++ S GG+KE+++ + G YS+ K+ESG+H
Sbjct: 121 EAGIFTGDLFRMYSRYVESKHWKIEIIEKNDSAAGGFKEVVSMVQGKGAYSQFKYESGIH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TETQGR+HTSA TVAV+PEA+++ DI+INPADL++D +R+SG GGQ +N TDS
Sbjct: 181 RVQRVPETETQGRVHTSAVTVAVLPEAEDV-DIDINPADLKVDVFRSSGPGGQSVNTTDS 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIPTG+V CQ+++SQHKNKA AL +L +R+ D+K++E+++ A R+ +G+
Sbjct: 240 AVRITHIPTGVVATCQDEKSQHKNKAKALNVLKSRLLDAKIQEEEAKRAADRKGQVGTGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSGRIRTY 307
>gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli]
gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli]
Length = 363
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/302 (47%), Positives = 217/302 (71%), Gaps = 2/302 (0%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++L +R +EL LL EV + + +E+ L P+V+ + Y+ +
Sbjct: 1 MKTSLFNRLTLIVQRYEELTALLANIEVIKDQNHFRNLSKEYVQLGPLVQCFQQYQTNLD 60
Query: 61 DIITAKEMLNDLE--MRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ A+ L D + ++ A++E+ +A+++ ++E E++ L+LP+D ND RN+F+EIRA
Sbjct: 61 RLNQAEHCLKDKDAIVQELAMEEMKIAQQKKIELEKELEHLLLPQDPNDDRNVFLEIRAA 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E +W EII R+ SE GGYKEIIARI G VY+ LKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARISGTKVYAHLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE QGR+HTS CTVA++PE + ++DI ++P+DL+IDT+RASGAGGQH+
Sbjct: 181 SGAHRVQRVPETEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDTFRASGAGGQHVQ 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITH+P+G+VV+CQ++RSQHKN+A A+ +L A++ ++ +Q+ A+ RR L+
Sbjct: 241 KTDSAIRITHLPSGLVVECQDERSQHKNRARAMSLLQAKLLAAQKAKQRREEAETRRDLV 300
Query: 299 GS 300
G+
Sbjct: 301 GT 302
>gi|406913012|gb|EKD52501.1| hypothetical protein ACD_62C00003G0011 [uncultured bacterium]
Length = 353
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 212/311 (68%), Gaps = 10/311 (3%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNI--KDYCKKVREHSFLYPIVELYNNYKKINEDI 62
M +KLE+ ++ ++L TQ+ + +D +E + L V Y YKK +++
Sbjct: 1 MFTKLEQVEQKFEDL----TQRMASGTLAPRDLTAMAKEQARLRETVTTYREYKKNTQEL 56
Query: 63 ITAKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
+K +L D +MR A +E+ +KR + E ++K L++P D ND++NI +EIRAGT
Sbjct: 57 AESKSLLEKEKDDDMRVMAREEVTKLEKRQSEFEKKLKLLLIPTDPNDEKNIILEIRAGT 116
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GG+E+ LFV DL RMY RF++ WK +I+S + ++ GG+KEIIA + G VYSKLK+ES
Sbjct: 117 GGEEAGLFVADLFRMYTRFADSQGWKIDIVSSNETDKGGFKEIIAMVTGDRVYSKLKYES 176
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G+HRVQRVP TE GRIHTSA +VA++PEA++IE ++I P DLRID RA GAGGQH+NK
Sbjct: 177 GIHRVQRVPDTEASGRIHTSAVSVAILPEAEDIE-LDIPPTDLRIDVMRAGGAGGQHVNK 235
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
T+SAVRITH+PT +VV C +DRSQHKNKA A+KIL +R+ D +EQ + A+ R+ ++G
Sbjct: 236 TESAVRITHLPTNLVVVCMDDRSQHKNKAQAMKILRSRLLDKMQQEQHAEEAQKRKTMVG 295
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 296 SGDRSEKIRTY 306
>gi|208434043|ref|YP_002265709.1| peptide chain release factor 1 [Helicobacter pylori G27]
gi|238058715|sp|B5Z680.1|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
Length = 352
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + EDI
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|385216848|ref|YP_005778324.1| peptide chain release factor 1 [Helicobacter pylori F16]
gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
Length = 352
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 208/297 (70%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E SF+ I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSFIEEISITSKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
Length = 357
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 208/310 (67%), Gaps = 5/310 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M ++L+ R +E+ +L +V ++ K Y RE S + P+ E +Y + + +
Sbjct: 1 MNNRLDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLAD 60
Query: 65 AKEMLND----LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
E++ D E++ A E K+ I + + L+LPKD ND R++ +EIRAGTG
Sbjct: 61 NLELIADPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E +K EI+S S + IGGYKEIIA+I G V+S+ KFESG
Sbjct: 121 GDEAALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+ GRIHTSACTVA++P A+E+ DINI P DLRID YRASGAGGQH+NKT
Sbjct: 181 AHRVQRVPETESGGRIHTSACTVAILPVAEEV-DINIRPEDLRIDVYRASGAGGQHVNKT 239
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
+SAVRITHIP+G+VV CQ+ SQHKNKA A+K+L AR+ D + E + ++ R+ ++GS
Sbjct: 240 ESAVRITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQARKGMVGS 299
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 300 GDRSERIRTY 309
>gi|402833147|ref|ZP_10881767.1| peptide chain release factor 1 [Selenomonas sp. CM52]
gi|402281139|gb|EJU29830.1| peptide chain release factor 1 [Selenomonas sp. CM52]
Length = 355
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/309 (48%), Positives = 212/309 (68%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML KL ++ +EL+ L++ V ++ + K REH+ L P+VE Y YKK+ E ++
Sbjct: 1 MLDKLHAVEEKYRELESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLE 60
Query: 65 AKEMLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
AK + +D +MR A DEI + R+ +E E+ L+LPKD ND +N+ +EIR G GG
Sbjct: 61 AKAIFDDNPDADMRRLAEDEIAELRPRLEALEHELPILLLPKDPNDAKNVIVEIRGGVGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL RMY R++ER W+ ++I ++ +EIGG+KEI + G YS LK+ESG
Sbjct: 121 EEAALFAGDLFRMYARYAERRGWRVDVIDKNATEIGGFKEISFSVDGAGAYSFLKYESGT 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTSA TVAV+PEA E ++ I PADLRIDTY ASGAGGQ++N+T+
Sbjct: 181 HRVQRVPVTESSGRIHTSAVTVAVLPEA-EEVEVEIAPADLRIDTYCASGAGGQYVNRTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
+A+RITH+PTGIVVQCQ+++SQ KNK A+++L ARI ++ EQ + A R+ +GS
Sbjct: 240 TAIRITHLPTGIVVQCQDEKSQLKNKEKAMRVLRARILEAAREEQAATVAADRKSQVGSG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|384895459|ref|YP_005769448.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
Length = 352
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + E+I
Sbjct: 3 ILAQKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ L + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E I+INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-ISINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|408822220|ref|ZP_11207110.1| peptide chain release factor 1 [Pseudomonas geniculata N1]
Length = 360
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 199/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE + L PI + + D+ A+ M D ++R A +EI A+ R+ ++E E+ L
Sbjct: 40 REFAQLEPIAIALADEARAKADLAAAEGMRADPDLRELADEEIAAAQARLQELEQELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++P+D D+ N+F+E+RAGTGGDE+A+F DL RMY R++ER WK EI S S E GGY
Sbjct: 100 LVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGY 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++AR++G +S+LKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADE++DI INP
Sbjct: 160 KEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADL++DT+R+SGAGGQH+NKT+SA+RITH+PTG+VV+CQ +RSQH N+ A+K L A++
Sbjct: 220 ADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ + Q + A+ RRL +GS + + +
Sbjct: 280 DAERQRQDAAQAESRRLQVGSGDRSQRIRTY 310
>gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 354
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 209/308 (67%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL + + +EL+ LL+ V ++ + + REH+ L PIV Y Y+K E +
Sbjct: 1 MLSKLTAVADKYRELEALLSDPAVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAE 60
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEML D EM+ L+EI A+ + E+ L+LP+D ND +N+ +EIR G GG+
Sbjct: 61 DKEMLAEADAEMKELLLEEIAAAEAERERLAEELPILLLPRDPNDDKNVIVEIRGGVGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF L RMY R++ER W+ EI+S + +EIGG+KEI + G YSKLK+ESG H
Sbjct: 121 EAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQR+P TE+ GRIHTSA TVAV+PEA+++E + I+P DLRIDTY ASGAGGQ++N+T++
Sbjct: 181 RVQRIPVTESGGRIHTSAVTVAVLPEAEDVE-VTIDPNDLRIDTYCASGAGGQYVNRTET 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+RITH+PTGIVVQCQ+++SQ KNK A+K+L ARI D +EQ A RR +GS
Sbjct: 240 AIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQEQADAVAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 354
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/308 (48%), Positives = 208/308 (67%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
MLSKL + +EL+ LL+ V ++ + + REH+ L PIVE Y +Y++ I
Sbjct: 1 MLSKLAAVEDKYRELETLLSDPSVMADMAVWQRYTREHAALTPIVEAYQSYRRALATIDE 60
Query: 65 AKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KEML D EM+ +EI A+ + E+ L+LP+D ND +N+ +EIR G GG+
Sbjct: 61 DKEMLAEADAEMKAMLTEEIAEAEAERDRLAAELPILLLPRDPNDDKNVIVEIRGGVGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF L RMY R++ER W+ E++S + +EIGG+KEI + G YSKLK+ESG H
Sbjct: 121 EAALFAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLVSGAGAYSKLKYESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQR+P TE+ GRIHTSA TVAV+PEA+E+E + I+P DLRIDTY ASGAGGQ++N+T++
Sbjct: 181 RVQRIPVTESGGRIHTSAVTVAVLPEAEEVE-VTIDPNDLRIDTYCASGAGGQYVNRTET 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
A+RITHIPTGIVVQCQ+++SQ KN+ A+K+L AR+ D +EQ A RR +GS
Sbjct: 240 AIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQEQADAVAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|420395969|ref|ZP_14895193.1| peptide chain release factor 1 [Helicobacter pylori CPY1124]
gi|420396807|ref|ZP_14896025.1| peptide chain release factor 1 [Helicobacter pylori CPY1313]
gi|393012181|gb|EJB13364.1| peptide chain release factor 1 [Helicobacter pylori CPY1124]
gi|393012469|gb|EJB13647.1| peptide chain release factor 1 [Helicobacter pylori CPY1313]
Length = 352
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ L + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|226739101|sp|B8DLL6.1|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 357
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 219/308 (71%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE +R ++L+ L EV N+ Y K + H+ L +V+++ YK++ +++
Sbjct: 1 MFAKLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLAD 60
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KE+L+D E+R+ A +E + I +IE E++ L+LPKD D++N +EIRAGTGG+
Sbjct: 61 NKELLDDADPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S + S+ GGYKE+IA I+G VYS+LKFESG H
Sbjct: 121 EAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ D+ I P D+RID +RASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATESQGRIHTSAATVAILPEAEEV-DVEIRPDDIRIDVFRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITH+P+GIVV CQ+++SQHKNKA A+K+L +R+ ++ Q + A RR +GS
Sbjct: 240 AVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|420495159|ref|ZP_14993724.1| peptide chain release factor 1 [Helicobacter pylori Hp P-23]
gi|393113292|gb|EJC13811.1| peptide chain release factor 1 [Helicobacter pylori Hp P-23]
Length = 352
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + EDI
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEDIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
Length = 358
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 211/305 (69%), Gaps = 3/305 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL + EL+ + V ++IK+ R+HS L +V Y Y+++ ++I AKE
Sbjct: 6 KLRELEAIYAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYRRYRQVRDEIAEAKE 65
Query: 68 MLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
++ D E+ A E+ + + IE +++ +LPKD ND++++ +EIRAGTGGDE++
Sbjct: 66 LVGGGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKDVIMEIRAGTGGDEAS 125
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
LF DL RMY R++ER WK EI+ + +E+GGYKEI+ +I G VYS+LK+ESGVHRVQ
Sbjct: 126 LFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYESGVHRVQ 185
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVP TE GRIHTSA TV V+P AD+I DI I P DL+IDTYR+SGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAGGRIHTSAATVVVMPVADDI-DIEIRPEDLKIDTYRSSGAGGQHVNMTDSAVR 244
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKS 305
ITH+PTG+VV CQ++RSQ KN+A AL++L R+ D+++ +Q+S + R+ +IGS +
Sbjct: 245 ITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIGSGDRSE 304
Query: 306 PLNIF 310
+ +
Sbjct: 305 RIRTY 309
>gi|384888733|ref|YP_005763035.1| peptide chain release factor 1 [Helicobacter pylori v225d]
gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
Length = 352
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + EDI
Sbjct: 3 ILAEKLSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEDIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|384899588|ref|YP_005774968.1| peptide chain release factor 1 [Helicobacter pylori F30]
gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
Length = 352
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + E+I
Sbjct: 3 ILAEKLFSILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ L + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYSKLKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
824]
gi|337738092|ref|YP_004637539.1| peptide chain release factor 1 [Clostridium acetobutylicum DSM
1731]
gi|384459603|ref|YP_005672023.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
gi|20139340|sp|Q97F68.1|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
824]
gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
gi|336292864|gb|AEI33998.1| peptide chain release factor 1 [Clostridium acetobutylicum DSM
1731]
Length = 359
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 205/309 (66%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML +LE + EL ++ V N ++ K +EHS + IV Y YKK ED+
Sbjct: 1 MLERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEA 60
Query: 65 AKEMLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
KEML D E++ +EI +K + D E E++ ++LPKD ND +N+F+EIR GTGG
Sbjct: 61 DKEMLRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL RMY R++ER W E++S + ++IGG+KEI+ + G YS++K+ESG
Sbjct: 121 EEAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGT 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTSA TVAV+PE D++ DI INP D+RID +RASG GGQ +N TD
Sbjct: 181 HRVQRVPNTESSGRIHTSAATVAVLPEVDDV-DIEINPNDIRIDVFRASGHGGQCVNTTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+PTGIVV CQ+++ Q KNK A+K+L AR+ + E+ + A+ RR +GS
Sbjct: 240 SAVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERNAGIAENRRNQVGSG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
gi|254790874|sp|B8I562.1|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
Length = 359
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 212/309 (68%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ R +E+ L+ +V NN +Y K ++E S L IV+ Y Y K+ ++I
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+E+L D + R E A++++ I+ ++K LI+PKD ND +N+ +EIR G GG
Sbjct: 61 ARELLEQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF L R +++E+ WK+EI+ + +E+GG+KE++ I G YS+LKFESGV
Sbjct: 121 EEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTS TVAV+PE +E+ D++INP+DLRIDTYRASGAGGQHINKTD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLPEVEEV-DVDINPSDLRIDTYRASGAGGQHINKTD 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SA+RITH+PTGIVV CQ++RSQHKNK A+KIL +++ + +Q + A+ R+ +G+
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQINEVAQDRKNQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>gi|347732302|ref|ZP_08865383.1| peptide chain release factor 1 [Desulfovibrio sp. A2]
gi|347518836|gb|EGY26000.1| peptide chain release factor 1 [Desulfovibrio sp. A2]
Length = 357
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 219/308 (71%), Gaps = 3/308 (0%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M +KLE +R ++L+ L EV N+ Y K + H+ L +V+++ YK++ +++
Sbjct: 1 MFAKLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLAD 60
Query: 65 AKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
KE+L+D E+R+ A +E + I +IE E++ L+LPKD D++N +EIRAGTGG+
Sbjct: 61 NKELLDDSDPEIRSMAHEEAKSLEAAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGE 120
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALF DL RMY R++E WK EI+S + S+ GGYKEIIA I+G VYS+LKFESG H
Sbjct: 121 EAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEIIALIVGDKVYSRLKFESGTH 180
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP TE+QGRIHTSA TVA++PEA+E+ D+ I P D+RID +RASGAGGQH+NKT+S
Sbjct: 181 RVQRVPATESQGRIHTSAATVAILPEAEEV-DVEIRPDDIRIDVFRASGAGGQHVNKTES 239
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITH+P+GIVV CQ+++SQHKNKA A+K+L +R+ ++ Q + A RR +GS
Sbjct: 240 AVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADRRSQVGSGD 299
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 300 RSERIRTY 307
>gi|425790477|ref|YP_007018394.1| peptide chain release factor 1 [Helicobacter pylori Aklavik86]
gi|425628792|gb|AFX89332.1| peptide chain release factor 1 [Helicobacter pylori Aklavik86]
Length = 352
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E I+INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-ISINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|344206150|ref|YP_004791291.1| peptide chain release factor 1 [Stenotrophomonas maltophilia JV3]
gi|343777512|gb|AEM50065.1| Peptide chain release factor 1 [Stenotrophomonas maltophilia JV3]
Length = 360
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 199/271 (73%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKL 99
RE + L P+ + + D+ A+ M D ++R A +EI A+ R+ ++E E+ L
Sbjct: 40 REFAQLEPVATALADEARAKADLAAAEGMRADPDLRELADEEIAAAQARLQELEQELALL 99
Query: 100 ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGY 159
++P+D D+ N+F+E+RAGTGGDE+A+F DL RMY R++ER WK EI S + E GGY
Sbjct: 100 LVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGY 159
Query: 160 KEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININP 219
KE++AR++G +S+LKFESG HRVQRVP TE+QGRIHTSA TVA+IPEADE++DI INP
Sbjct: 160 KEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINP 219
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
ADL++DT+R+SGAGGQH+NKT+SA+RITH+PTG+VV+CQ +RSQH N+ A+K L A++
Sbjct: 220 ADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLL 279
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
D++ + Q + A+ RRL +GS + + +
Sbjct: 280 DAERQRQDAAQAESRRLQVGSGDRSQRIRTY 310
>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|384129898|ref|YP_005512511.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
Length = 357
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 213/303 (70%), Gaps = 1/303 (0%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KLE KR +E+ L+ ++V + + K ++ + +V+LY YKK+ +DI A+E
Sbjct: 9 KLEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQKDIKEAQE 68
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
+L E A +EI K+ IE E+K L+LPKD+ D RN+ +EIRAG GG+E+ALF
Sbjct: 69 LLKSREFEELAKEEIKRLKREEERIEKELKILMLPKDERDSRNVILEIRAGVGGEEAALF 128
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
V DLL MY +++E WKF I+S + + +GGYKE+IA I G+ YS+LK+ESGVHRVQR+
Sbjct: 129 VADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRLKYESGVHRVQRI 188
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+ GRIHTS TVAV+PE DE E + INP DL+I+T+RASGAGGQ++N T++AVR+T
Sbjct: 189 PRTESGGRIHTSTATVAVLPEVDETE-LEINPQDLKIETFRASGAGGQYVNTTETAVRVT 247
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
HIPTGI V CQ++RSQ +NK ALKIL AR+KD R+++ AK R++ +G+ ++ +
Sbjct: 248 HIPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEEIAKERKMQVGTGERSEKI 307
Query: 308 NIF 310
+
Sbjct: 308 RTY 310
>gi|420398142|ref|ZP_14897355.1| peptide chain release factor 1 [Helicobacter pylori CPY1962]
gi|393014816|gb|EJB15987.1| peptide chain release factor 1 [Helicobacter pylori CPY1962]
Length = 352
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/297 (49%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + E+I
Sbjct: 3 ILAEKLSSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDRELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
Length = 358
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/309 (48%), Positives = 214/309 (69%), Gaps = 4/309 (1%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL+ R +EL L + +V N+ + K ++E S L PIVE YN YK + I
Sbjct: 3 MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62
Query: 65 AKEML---NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
++EML +D EMR A +E++ +KKR+ ++E E+K L+LPKD ND +NI +EIRAG GG
Sbjct: 63 SEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 122
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DESALF ++ RMY+ ++E +WK E+IS S + IGG+KE++ + G VYS++K+ESGV
Sbjct: 123 DESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESGV 182
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE+ GRIHTS TVAV+PEA+E+ D+ I+ D+RID RASG GGQ +N TD
Sbjct: 183 HRVQRVPETESGGRIHTSTITVAVMPEAEEV-DVVIDEKDIRIDVMRASGNGGQCVNTTD 241
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVR+TH PTGIV+ Q ++SQ +NK A ++L +++ + +L +QQS A+ RR IG+
Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 301
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 302 DRSEKIRTY 310
>gi|420464766|ref|ZP_14963533.1| peptide chain release factor 1 [Helicobacter pylori Hp H-6]
gi|393082253|gb|EJB82969.1| peptide chain release factor 1 [Helicobacter pylori Hp H-6]
Length = 352
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 1/297 (0%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ KL KR EL LL+ EV ++IK + +E S + I Y + EDI
Sbjct: 3 ILAEKLSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIK 62
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
KE+L D E+ A +E+ + + + D+E IK+L++PKD ND +NI++E+RAGTGGDE
Sbjct: 63 ENKELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDE 122
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ +FV DL + Y R+++ WK EI+S S + +GGYKEIIA I G VYS+LKFE+G HR
Sbjct: 123 AGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHR 182
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGRIHTSA TVA++PE D++E ++INP+DL+I+ +RA G GGQ +N TDSA
Sbjct: 183 VQRVPETESQGRIHTSAITVAIMPEVDDVE-VSINPSDLKIEVFRAGGHGGQCVNTTDSA 241
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
VRITH+PT I V Q+++SQHKNK ALKIL AR+ + ++ EQQ AK R+ +GS
Sbjct: 242 VRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGS 298
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,491,851,556
Number of Sequences: 23463169
Number of extensions: 365718689
Number of successful extensions: 1119414
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13475
Number of HSP's successfully gapped in prelim test: 2706
Number of HSP's that attempted gapping in prelim test: 1083470
Number of HSP's gapped (non-prelim): 17568
length of query: 570
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 422
effective length of database: 8,886,646,355
effective search space: 3750164761810
effective search space used: 3750164761810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)