BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2395
(570 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SUF6|RF1_JANMA Peptide chain release factor 1 OS=Janthinobacterium sp. (strain
Marseille) GN=prfA PE=3 SV=1
Length = 360
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/310 (65%), Positives = 251/310 (80%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL EL+ LL Q++ +N+ +Y K REH+ L P+V LY NY++ +
Sbjct: 1 MKPSMLAKLDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML+D +M+ FA +EI AK R+ +E++++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DIQDAQGMLSDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY RF+ERN W+ E++S S SE+GGYKE+I RIIG YSKLKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVA++PEADE+ED+NINPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIVV+CQ+DRSQHKNKA ALK+L ARIKD +LREQQS A R+ LIGS
Sbjct: 241 DSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B2SZ27|RF1_BURPP Peptide chain release factor 1 OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=prfA PE=3 SV=1
Length = 360
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+V+ Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA DEI A++R+ + E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DATTAQELLADASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B2JHK8|RF1_BURP8 Peptide chain release factor 1 OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=prfA PE=3 SV=1
Length = 360
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL++ + RL EL+ LL+++++ +NI Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQAKLDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D M++FA +EI +++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q39K18|RF1_BURS3 Peptide chain release factor 1 OS=Burkholderia sp. (strain 383)
GN=prfA PE=3 SV=1
Length = 360
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L DL MR+FA DEI A++ + +E E++K++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DETAAQELLGDLSMRDFAEDEIRSARESMSRLETELQKMLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q13TU2|RF1_BURXL Peptide chain release factor 1 OS=Burkholderia xenovorans (strain
LB400) GN=prfA PE=3 SV=1
Length = 360
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 241/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ + RL EL+ LL+++++ +N+ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L D MR+FA +EI A++R+ + E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DAATAQELLADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ERN W+ E++S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQQ+ A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B2UDM7|RF1_RALPJ Peptide chain release factor 1 OS=Ralstonia pickettii (strain 12J)
GN=prfA PE=3 SV=1
Length = 360
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R+ E++ LL +++ N+ Y K REH+ L P+V + +K+ E
Sbjct: 1 MKPSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+E+ D +M+ FA DE+ A++R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 61 DIATAQELAADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+IAR++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q8XVD0|RF1_RALSO Peptide chain release factor 1 OS=Ralstonia solanacearum (strain
GMI1000) GN=prfA PE=3 SV=1
Length = 360
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 239/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK MLSKL++ ++R E++ LL +++ N+ Y K REH+ L P+V Y +K+ +
Sbjct: 1 MKPSMLSKLDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+E+L D +M+ FA DEI A++R+ +E E+++L+LPKD ND RNIF+EIRAGTG
Sbjct: 61 DVTTAQELLADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I R++G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD + RE Q+ A R+ LIGS
Sbjct: 241 DSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q0BIQ0|RF1_BURCM Peptide chain release factor 1 OS=Burkholderia ambifaria (strain
ATCC BAA-244 / AMMD) GN=prfA PE=3 SV=1
Length = 360
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y + REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++R+ +E E++K++LPKD ND RNIF+EIRAG G
Sbjct: 61 DETAAQELLADASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B1YSD5|RF1_BURA4 Peptide chain release factor 1 OS=Burkholderia ambifaria (strain
MC40-6) GN=prfA PE=3 SV=1
Length = 360
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y + REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++R+ +E E++K++LPKD ND RNIF+EIRAG G
Sbjct: 61 DETAAQELLADASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIRAGAG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q46WS9|RF1_CUPPJ Peptide chain release factor 1 OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=prfA PE=3 SV=1
Length = 360
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 240/310 (77%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL+E++ LL +++ NI Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASMLAKLDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM++FA DEI A++R+ +E ++KL+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY RF+ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ D+ INP+DLRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD ++R Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQMRAAQAKEASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q2Y5P3|RF1_NITMU Peptide chain release factor 1 OS=Nitrosospira multiformis (strain
ATCC 25196 / NCIMB 11849) GN=prfA PE=3 SV=1
Length = 358
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M M +KL + S RL+EL+ LL+ + + N+ Y K RE + + P+V+LYN Y + +
Sbjct: 1 MNKSMTAKLTQLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+EM + EMR FA EI AK+R+ E++K +LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIHTAQEMAAEAEMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY RF+ER W+ EIIS+S S++GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAADLFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEIED+ +NPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+ RSQHKNKA A+ +L ARI+D +++EQQS A R+ L+G+
Sbjct: 241 DSAVRITHLPTGIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQEQQSKQAATRKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GNRSGRIRTY 310
>sp|A0K437|RF1_BURCH Peptide chain release factor 1 OS=Burkholderia cenocepacia (strain
HI2424) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B1JUS4|RF1_BURCC Peptide chain release factor 1 OS=Burkholderia cenocepacia (strain
MC0-3) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q1BSB1|RF1_BURCA Peptide chain release factor 1 OS=Burkholderia cenocepacia (strain
AU 1054) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B4E6U6|RF1_BURCJ Peptide chain release factor 1 OS=Burkholderia cepacia (strain
J2315 / LMG 16656) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA DEI A++ + +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q1GYE8|RF1_METFK Peptide chain release factor 1 OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/310 (61%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M+ KL S+RL EL+ LL+ ++V N+I +Y K REH+ + PIVE + Y++
Sbjct: 1 MKPSMIKKLATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEI 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A+ ML D EM+ FA +E K+++ DIE +++KL+LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DIKEAQAMLADPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER WK EI+S + SE+GGYKEIIA+I G YSKLKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+ D+ INPAD+RIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH PTGIVV+CQ+ RSQH NKA A+++L ARIK ++ EQQS A RR LIGS
Sbjct: 241 DSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQSKIASERRSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q3SG10|RF1_THIDA Peptide chain release factor 1 OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KL + +RL+ELD LL Q EV ++ Y K REH+ L P+V LY YK++
Sbjct: 1 MKATLADKLARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+EML D +MR A E+ RI ++E E++ +LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DQKTAQEMLADADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY R++ER WK EI+S S E+GGYKE+I RI+G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TE+QGRIHTSACTVAV+PEA E+ +++INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+N+A A+ +L AR+KD +++ QQ++ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQAQQASEASTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q2SUG2|RF1_BURTA Peptide chain release factor 1 OS=Burkholderia thailandensis
(strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
GN=prfA PE=3 SV=1
Length = 360
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A++R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q63QF0|RF1_BURPS Peptide chain release factor 1 OS=Burkholderia pseudomallei (strain
K96243) GN=prfA PE=3 SV=1
Length = 360
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A3NE24|RF1_BURP6 Peptide chain release factor 1 OS=Burkholderia pseudomallei (strain
668) GN=prfA PE=3 SV=1
Length = 360
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q3JN85|RF1_BURP1 Peptide chain release factor 1 OS=Burkholderia pseudomallei (strain
1710b) GN=prfA PE=3 SV=1
Length = 360
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A3NZS4|RF1_BURP0 Peptide chain release factor 1 OS=Burkholderia pseudomallei (strain
1106a) GN=prfA PE=3 SV=1
Length = 360
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q9JY93|RF1_NEIMB Peptide chain release factor 1 OS=Neisseria meningitidis serogroup
B (strain MC58) GN=prfA PE=3 SV=1
Length = 358
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 246/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ S RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A1UWC9|RF1_BURMS Peptide chain release factor 1 OS=Burkholderia mallei (strain
SAVP1) GN=prfA PE=3 SV=1
Length = 360
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q62DF3|RF1_BURMA Peptide chain release factor 1 OS=Burkholderia mallei (strain ATCC
23344) GN=prfA PE=3 SV=1
Length = 360
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A2RYL2|RF1_BURM9 Peptide chain release factor 1 OS=Burkholderia mallei (strain NCTC
10229) GN=prfA PE=3 SV=1
Length = 360
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A3MFT4|RF1_BURM7 Peptide chain release factor 1 OS=Burkholderia mallei (strain NCTC
10247) GN=prfA PE=3 SV=1
Length = 360
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M SKL++ + RL EL+ LL+++ V ++ Y K REH+ + P+VE Y +++
Sbjct: 1 MKTSMQSKLDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D + A+E+L D MR+FA DE+ A+ R+ + E++ ++LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DELAAQELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF +LLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B3R722|RF1_CUPTR Peptide chain release factor 1 OS=Cupriavidus taiwanensis (strain
R1 / LMG 19424) GN=prfA PE=3 SV=1
Length = 360
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML+KL++ ++RL E++ LL +++ NI Y K REH+ L P+ E Y+ Y++ +
Sbjct: 1 MKASMLAKLDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM++FA DEI A+ R+ ++ +++L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ E++S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ ++ INPADLRIDT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD + R Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAREASTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|A9AJ68|RF1_BURM1 Peptide chain release factor 1 OS=Burkholderia multivorans (strain
ATCC 17616 / 249) GN=prfA PE=3 SV=1
Length = 360
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA +EI A++R+ +E+E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DETAAQELLADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+RF+ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ IN ADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q9JT75|RF1_NEIMA Peptide chain release factor 1 OS=Neisseria meningitidis serogroup
A / serotype 4A (strain Z2491) GN=prfA PE=3 SV=1
Length = 358
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A1KV95|RF1_NEIMF Peptide chain release factor 1 OS=Neisseria meningitidis serogroup
C / serotype 2a (strain ATCC 700532 / FAM18) GN=prfA
PE=3 SV=1
Length = 358
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 245/310 (79%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A4JB50|RF1_BURVG Peptide chain release factor 1 OS=Burkholderia vietnamiensis
(strain G4 / LMG 22486) GN=prfA PE=3 SV=1
Length = 360
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M KL++ S RL EL+ LL+++ V ++ Y K REH+ L P+VE Y +++
Sbjct: 1 MKTSMQRKLDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRN 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+E+L D MR+FA + I A++R+ +E E++K++LPKD ND RNIF+EIRAGTG
Sbjct: 61 DEAAAQELLADASMRDFAEEAIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY+R++ER W+ E++S S S++GGYKE+I RI G YS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+PEADEI ++ INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+THIPTGIVV+CQ+DRSQHKNK ALK+L ARIKD + EQ + A R+ LIGS
Sbjct: 241 DSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q5F750|RF1_NEIG1 Peptide chain release factor 1 OS=Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090) GN=prfA PE=3 SV=1
Length = 358
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 244/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLR DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A9M1Q8|RF1_NEIM0 Peptide chain release factor 1 OS=Neisseria meningitidis serogroup
C (strain 053442) GN=prfA PE=3 SV=1
Length = 358
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 242/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E ++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I ++ E++KL+LPKD +D +NIFIE+RAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARIIGL YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NP DLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q1LIF3|RF1_RALME Peptide chain release factor 1 OS=Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839) GN=prfA PE=3 SV=2
Length = 360
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 238/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +KL++ ++RL E++ LL +++ N+ Y K REH+ L P+ E Y Y++ +
Sbjct: 1 MKASISTKLDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQD 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+ +L+D EM+ FA DEI+ A++R+ +E ++ L+LPKD ND RN+ +EIRAGTG
Sbjct: 61 DLATAQALLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G+ESALF DLLRMY R++ER W+ EI+S S S++GGYKE+I RI G +S+LKFESG
Sbjct: 121 GEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+ ++ INP+DLR+DT+RASGAGGQH+NKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVR+TH+PTGIVV+CQ+DRSQH+NK A+K+L ARIKD +LR Q+ A RR LIGS
Sbjct: 241 DSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRNLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q82TH4|RF1_NITEU Peptide chain release factor 1 OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=prfA PE=3 SV=1
Length = 359
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 237/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ +L + S RL ELD LL+ +++ ++ +Y K RE + + P+ ELY Y+++ +
Sbjct: 1 MNKGIIDQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EM +D + R+FA EI ++++ +IE EI + +LPKD ND+RNIF+EIRAGTG
Sbjct: 61 DLATAREMSSDPQFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ E++S++ SE+GGYKEII RIIG YS+LKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTS CTVAV+PEADEI DI +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ RSQHKNKA A+ +L+ARI D ++R QQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARILDKQVRAQQAEQAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSERIRTY 310
>sp|B4RN52|RF1_NEIG2 Peptide chain release factor 1 OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=prfA PE=3 SV=1
Length = 358
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 243/310 (78%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +L KL++ RL+E+ LL Q E +++ +Y K REH+ L P+VE++ NY+
Sbjct: 1 MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQS 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML+D EM++FA +EI AK +I +++ E++KL+LPKD +D +NIFIEIRAGTG
Sbjct: 61 DLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
G E+ALF DLLRMY R++ERN W+ EI+S + SE+GGYKE+IARI+GL YS+LKFESG
Sbjct: 121 GGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PEADE+EDI +NPADLR DT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+ RSQH NKA A+K+L AR+ D++ RE Q+ A R+ LIGS
Sbjct: 241 DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A9IER8|RF1_BORPD Peptide chain release factor 1 OS=Bordetella petrii (strain ATCC
BAA-461 / DSM 12804 / CCUG 43448) GN=prfA PE=3 SV=1
Length = 360
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 235/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ S RL E+D LL + + +++ + K RE + L P+V+ + + + +
Sbjct: 1 MKSSMRSRLEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTED 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D +M+ A DEI ++R+ +E E++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E+ W+ E++S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|A1K443|RF1_AZOSB Peptide chain release factor 1 OS=Azoarcus sp. (strain BH72)
GN=prfA PE=3 SV=1
Length = 361
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + RL ELD L+ ++ ++ + RE + L P+V LY Y++ +
Sbjct: 1 MKQSIRDKLEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D TA+E+L+D EM+ E+ + RI ++ ++++ +LP+D ND+RN+F+EIRAGTG
Sbjct: 61 DCATARELLDDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ER W+ EI+S + S++GGYKE+IARI+G YS+LKFESG
Sbjct: 121 GDEAALFAGDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TETQGRIHTSACTVAV+PEADE+ + INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRIPVTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NKA A+ +L AR+ D++LR +QS A RR LIGS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQSAEAATRRSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q7W023|RF1_BORPE Peptide chain release factor 1 OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=prfA PE=3 SV=1
Length = 360
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ + K RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q7WQE9|RF1_BORBR Peptide chain release factor 1 OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=prfA PE=3 SV=1
Length = 360
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ + K RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q2KZZ3|RF1_BORA1 Peptide chain release factor 1 OS=Bordetella avium (strain 197N)
GN=prfA PE=3 SV=2
Length = 360
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ML +LE+ + RL E+D LL + ++ + + RE + L P+V +N ++
Sbjct: 1 MKSSMLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML D EM+ A +EI A++RI +E E++ L+LP+D ND R++F+EIRAGTG
Sbjct: 61 DLATAQEMLADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+IARI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEADE+ DI INPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD +LRE+QS A R+ L+GS
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q7WCE3|RF1_BORPA Peptide chain release factor 1 OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=prfA PE=3 SV=1
Length = 360
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 232/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M S+LE+ + RL E+D LL + E ++ + K RE + L P+VE +N + +
Sbjct: 1 MKPSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA+EML+D +M+ A DEI + RI ++E ++ L+LP+D +D R++F+EIRAGTG
Sbjct: 61 DVATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R++E W+ EI+S S SE+GGYKE+I RI G Y +LKFESG
Sbjct: 121 GDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE QGRIHTSACTVAV+PEAD + DI INP+DLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTG+VV+CQ+DRSQH+NK A+++L AR+KD ++RE+QS A R+ LIGS
Sbjct: 241 DSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q5P7G7|RF1_AROAE Peptide chain release factor 1 OS=Aromatoleum aromaticum (strain
EbN1) GN=prfA PE=3 SV=1
Length = 359
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 227/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE + RL ELD L+ + ++ + RE + + P+V LY Y++
Sbjct: 1 MKQSIRDKLELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D +A+ ML D EMR A E+ R+ +E E++ +LP D +D+RN+F+E+RAGTG
Sbjct: 61 DCESARAMLADAEMRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE++LF DLLRMY R++ER WK EI+S S S++GGYKE+I RI G YSKLKFESG
Sbjct: 121 GDEASLFAGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQR+P TETQGRIHTSACTVAV+PEADE+E +NINPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRIPVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIVV+CQ+DRSQH+N+A A+ +L ARI+D +LREQQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQLREQQAREAATRKSLVGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|Q0AHU1|RF1_NITEC Peptide chain release factor 1 OS=Nitrosomonas eutropha (strain
C91) GN=prfA PE=3 SV=1
Length = 359
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
M ++ +L + S RL+ELD LL+ +++ ++ +Y K RE S + P+ Y+ Y+++ +
Sbjct: 1 MNKGIVDQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQ 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ TA EM D + R+FA EI+ K+++ DIE EI K +LP+D ND+RNIF+EIRAGTG
Sbjct: 61 DLATAMEMSVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DL RMY R++ER W+ EI+S++ SE+GGYKEIIARIIG YS+LKFESG
Sbjct: 121 GDESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGR+HTS CTVAV+PEADEI + +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 AHRVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITH+PTGIV +CQ RSQHKNKA A+ +L++RI D ++R QQ+ A R+ L+GS
Sbjct: 241 DSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRILDKQVRAQQAEQAAARKSLVGS 300
Query: 301 VQKKSPLNIF 310
++ + +
Sbjct: 301 GERSERIRTY 310
>sp|A4SV43|RF1_POLSQ Peptide chain release factor 1 OS=Polynucleobacter necessarius
subsp. asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=prfA PE=3 SV=1
Length = 359
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 236/310 (76%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL+ RL EL+ LLT +E ++ Y K REHS + +VE + YKK
Sbjct: 1 MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EM D EM++FA +E A+ + ++E ++KL+LPKD ND+RN+F+EIRAGTG
Sbjct: 61 DAQAAEEMRKDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY RF+ER WK E+++ + S++GGYKE++ R++G +VYS+LKFESG
Sbjct: 121 GDESALFAGDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PEADE+E + INPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTG VV+CQ+DRSQH+N+ A+K+L++RI D++ RE+ A+ R+ LIGS
Sbjct: 241 DSAVRITHIPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|Q7P1Y2|RF1_CHRVO Peptide chain release factor 1 OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=prfA PE=3 SV=1
Length = 358
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 233/310 (75%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + ++L + + RL+E+ LL + +++ + K REH+ L P+VE ++ Y++
Sbjct: 1 MKASIAARLAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEG 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A++ML D EM+ FA EI K ++ ++LE++KL+LPKD ND +NIF+EIRAGTG
Sbjct: 61 DIAAAEDMLADPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DLLRMY R++ERN W+ EI+S S S++GGYKE+I R++G YS+LKFESG
Sbjct: 121 GDEAALFAADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ EADEI ++ +NPADLRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+ RSQH NKA A+++L ARI D +LRE+ A R+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLREKNQKEAAERKSLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSERIRTY 310
>sp|B1XSY0|RF1_POLNS Peptide chain release factor 1 OS=Polynucleobacter necessarius
subsp. necessarius (strain STIR1) GN=prfA PE=3 SV=1
Length = 359
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 231/310 (74%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK M +KL+ RL EL+ LLT +E ++ Y K REHS + +VE + YK+
Sbjct: 1 MKPSMRAKLDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D A+EM D EM+ FA +E A + +E ++KL+LPKD+ND+RN+F+EIRAGTG
Sbjct: 61 DAQAAEEMRKDPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE ALF DLLRMY RF+ER WK E++S + S++GGYKE++ R++G VYS+LKFESG
Sbjct: 121 GDEGALFAGDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP+TETQGRIHTSACTVAV+PE DE+E + INPA+LRIDT+RASGAGGQHINKT
Sbjct: 181 GHRVQRVPQTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTG VV+CQ+DRSQH+N+ A+K+L++RI D++ RE+ A+ R+ L+G+
Sbjct: 241 DSAIRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLVGT 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|C5CXW3|RF1_VARPS Peptide chain release factor 1 OS=Variovorax paradoxus (strain
S110) GN=prfA PE=3 SV=1
Length = 362
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 228/310 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + +LE++++RL ELDFLL+++++ +++ Y REH+ + I Y YK+
Sbjct: 1 MKTFLRHQLERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI A EML D +M A +EI A+ + +E E+++L+LPKD +D RN F+EIRAGTG
Sbjct: 61 DIAGAAEMLEDPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDESALF DLLRMY R+ ER W+ E++S S SE+GGYKE++ RI G +V+ +L+FESG
Sbjct: 121 GDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLRFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TETQGRIHTSACTVAV+ E DE + INPADLRIDTYRASGAGGQHINKT
Sbjct: 181 GHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSAVRITHIPTGIV +CQ+DRSQH+NKA AL++L ARI++ E+ + A MR+ LIGS
Sbjct: 241 DSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKDRSERAAKDAAMRKGLIGS 300
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 301 GDRSDRIRTY 310
>sp|A1W4B8|RF1_ACISJ Peptide chain release factor 1 OS=Acidovorax sp. (strain JS42)
GN=prfA PE=3 SV=1
Length = 367
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 229/318 (72%), Gaps = 8/318 (2%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + S+LE++++RL+ELDFLL+++++ +++ Y REH+ + + Y Y++
Sbjct: 1 MKPFLRSQLERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREA 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
D+ A+EML D +M A +EI+ A+ + +E E+++L+LPKD +D+RN FIEIRAGTG
Sbjct: 61 DLAGAREMLEDPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI--------IGLNVY 172
GDESALF DL RMY R++ WK E++S + SEIGGYKE++ RI G VY
Sbjct: 121 GDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSGSGVY 180
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LKFESG HRVQRVP TETQGRIHTSACTVAV+PE DE + I +NPADLRIDT+RASGA
Sbjct: 181 GALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGA 240
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQHINKTDSAVR+ H+PTGIV +CQ+ RSQH NKA AL++L ARI++ + E+ + A
Sbjct: 241 GGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAA 300
Query: 293 MRRLLIGSVQKKSPLNIF 310
+R+ LIGS + + +
Sbjct: 301 LRKGLIGSGDRSDRIRTY 318
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,413,407
Number of Sequences: 539616
Number of extensions: 9082175
Number of successful extensions: 32736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 30066
Number of HSP's gapped (non-prelim): 1550
length of query: 570
length of database: 191,569,459
effective HSP length: 123
effective length of query: 447
effective length of database: 125,196,691
effective search space: 55962920877
effective search space used: 55962920877
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)