Query psy2395
Match_columns 570
No_of_seqs 633 out of 4847
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 23:56:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d5a_X RF1, peptide chain rele 100.0 1.8E-93 6.2E-98 723.4 36.8 309 5-314 1-309 (354)
2 1zbt_A RF-1, peptide chain rel 100.0 5.2E-93 1.8E-97 722.9 29.3 311 3-314 13-327 (371)
3 2b3t_B RF-1, peptide chain rel 100.0 2.3E-94 7.7E-99 731.6 13.5 314 1-314 1-314 (360)
4 1gqe_A Release factor 2, RF2; 100.0 5.4E-90 1.8E-94 701.9 33.3 303 7-314 25-330 (365)
5 2ihr_1 Peptide chain release f 100.0 2.4E-88 8.2E-93 688.6 20.8 300 8-314 18-318 (365)
6 1rq0_A RF-1, peptide chain rel 100.0 9.3E-85 3.2E-89 655.8 24.9 288 13-314 2-290 (342)
7 2b3t_A Protein methyltransfera 100.0 1.6E-36 5.3E-41 307.0 21.8 254 310-569 22-275 (276)
8 2rsm_A Probable peptide chain 100.0 1.4E-37 4.7E-42 261.8 9.1 101 181-284 10-110 (115)
9 1nv8_A HEMK protein; class I a 100.0 1E-34 3.5E-39 295.0 21.3 239 311-569 37-281 (284)
10 4dzr_A Protein-(glutamine-N5) 99.9 4.6E-27 1.6E-31 226.5 11.7 195 370-569 1-204 (215)
11 1j26_A Immature colon carcinom 99.9 1.1E-24 3.9E-29 186.2 10.2 70 213-282 13-107 (112)
12 2jva_A Peptidyl-tRNA hydrolase 99.9 7.4E-25 2.5E-29 186.1 8.5 69 214-282 7-99 (108)
13 3evz_A Methyltransferase; NYSG 99.9 1.1E-21 3.6E-26 192.0 21.5 184 363-562 24-210 (230)
14 2h00_A Methyltransferase 10 do 99.9 1.1E-21 3.9E-26 195.1 18.9 203 364-569 25-250 (254)
15 4dh9_Y YAEJ; ribosome, YAEJ, r 99.9 7.4E-23 2.5E-27 182.1 7.3 70 214-283 7-100 (140)
16 3q87_B N6 adenine specific DNA 99.8 1.5E-19 5.2E-24 169.0 17.9 158 375-568 2-160 (170)
17 1uwv_A 23S rRNA (uracil-5-)-me 99.8 6.5E-18 2.2E-22 181.3 22.7 198 321-553 197-410 (433)
18 3lpm_A Putative methyltransfer 99.8 3.6E-18 1.2E-22 170.5 19.3 178 366-555 20-199 (259)
19 1jsx_A Glucose-inhibited divis 99.7 2.1E-17 7.1E-22 158.6 15.7 185 331-569 12-204 (207)
20 2ozv_A Hypothetical protein AT 99.7 2.2E-17 7.5E-22 165.1 15.4 155 396-561 35-198 (260)
21 3p9n_A Possible methyltransfer 99.7 4.7E-17 1.6E-21 154.3 16.1 140 364-534 9-155 (189)
22 3g89_A Ribosomal RNA small sub 99.7 3.2E-17 1.1E-21 162.9 13.8 174 336-555 32-210 (249)
23 2fhp_A Methylase, putative; al 99.7 3.1E-17 1.1E-21 154.3 12.6 147 357-536 5-158 (187)
24 1dus_A MJ0882; hypothetical pr 99.7 1.9E-16 6.4E-21 149.2 18.0 171 356-561 11-186 (194)
25 3bzb_A Uncharacterized protein 99.7 1.9E-17 6.4E-22 167.5 10.2 193 326-555 13-235 (281)
26 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.5E-16 8.6E-21 152.3 17.5 164 373-559 19-184 (214)
27 2f8l_A Hypothetical protein LM 99.7 1.1E-16 3.9E-21 166.4 16.0 201 334-563 81-294 (344)
28 1o54_A SAM-dependent O-methylt 99.7 1.6E-16 5.4E-21 160.1 15.2 173 354-562 53-244 (277)
29 3b3j_A Histone-arginine methyl 99.7 2.2E-17 7.4E-22 179.0 8.9 179 319-532 73-263 (480)
30 3dmg_A Probable ribosomal RNA 99.7 5.8E-16 2E-20 163.0 18.6 141 367-535 197-343 (381)
31 2ift_A Putative methylase HI07 99.7 3.1E-16 1.1E-20 150.5 13.1 147 357-536 14-167 (201)
32 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.7E-15 5.7E-20 151.5 18.7 155 386-569 59-256 (261)
33 4dcm_A Ribosomal RNA large sub 99.7 6.3E-16 2.1E-20 162.6 15.9 144 366-535 191-337 (375)
34 1ws6_A Methyltransferase; stru 99.7 1.9E-16 6.5E-21 146.6 10.4 139 363-536 7-151 (171)
35 2fpo_A Methylase YHHF; structu 99.7 4.2E-16 1.4E-20 149.7 13.1 144 357-534 15-162 (202)
36 2nxc_A L11 mtase, ribosomal pr 99.7 2.1E-15 7.3E-20 150.1 18.6 153 367-557 88-244 (254)
37 2esr_A Methyltransferase; stru 99.7 3.8E-16 1.3E-20 146.0 12.1 133 374-536 6-142 (177)
38 3kr9_A SAM-dependent methyltra 99.7 2.6E-15 8.8E-20 146.1 17.8 128 395-554 13-140 (225)
39 3grz_A L11 mtase, ribosomal pr 99.6 2.2E-15 7.7E-20 144.3 16.5 153 368-557 29-185 (205)
40 3eey_A Putative rRNA methylase 99.6 4.7E-15 1.6E-19 141.0 18.3 143 394-554 19-170 (197)
41 2igt_A SAM dependent methyltra 99.6 2.3E-15 7.8E-20 155.7 17.3 166 366-551 117-298 (332)
42 3ocj_A Putative exported prote 99.6 1.5E-15 5.1E-20 155.1 15.5 150 395-570 116-304 (305)
43 2frn_A Hypothetical protein PH 99.6 3.4E-15 1.2E-19 150.6 17.8 148 366-553 95-253 (278)
44 2b78_A Hypothetical protein SM 99.6 5.2E-15 1.8E-19 156.2 19.0 165 366-554 179-359 (385)
45 4fsd_A Arsenic methyltransfera 99.6 4.2E-15 1.4E-19 156.9 17.6 155 377-556 49-250 (383)
46 3lec_A NADB-rossmann superfami 99.6 6.7E-15 2.3E-19 143.5 17.6 142 395-568 19-162 (230)
47 2fca_A TRNA (guanine-N(7)-)-me 99.6 3.1E-15 1.1E-19 144.9 15.2 161 374-559 17-181 (213)
48 3dlc_A Putative S-adenosyl-L-m 99.6 5.7E-15 2E-19 141.9 17.0 147 384-560 30-206 (219)
49 3mti_A RRNA methylase; SAM-dep 99.6 1.2E-14 4E-19 136.9 17.9 145 388-554 13-166 (185)
50 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5E-19 138.5 18.6 122 395-549 38-160 (204)
51 2pt6_A Spermidine synthase; tr 99.6 3.3E-15 1.1E-19 153.8 14.9 178 354-556 69-258 (321)
52 1xj5_A Spermidine synthase 1; 99.6 3.1E-15 1.1E-19 154.7 14.7 168 353-543 72-248 (334)
53 3tma_A Methyltransferase; thum 99.6 4.8E-15 1.7E-19 154.7 16.2 157 381-561 186-343 (354)
54 3m6w_A RRNA methylase; rRNA me 99.6 5.2E-15 1.8E-19 158.8 15.8 162 376-551 83-253 (464)
55 3dh0_A SAM dependent methyltra 99.6 1.8E-14 6E-19 139.2 17.4 145 395-569 35-192 (219)
56 1nkv_A Hypothetical protein YJ 99.6 1.6E-14 5.4E-19 142.9 17.4 144 381-555 19-185 (256)
57 1o9g_A RRNA methyltransferase; 99.6 2.6E-15 8.9E-20 148.8 11.7 132 385-534 38-215 (250)
58 3gnl_A Uncharacterized protein 99.6 1.7E-14 5.7E-19 141.8 17.2 127 395-553 19-145 (244)
59 1xdz_A Methyltransferase GIDB; 99.6 2.6E-14 8.8E-19 140.8 17.9 126 397-555 70-200 (240)
60 3m33_A Uncharacterized protein 99.6 5.7E-15 2E-19 144.0 12.6 138 376-555 27-165 (226)
61 3k6r_A Putative transferase PH 99.6 2.9E-14 1E-18 143.2 17.8 147 367-551 96-251 (278)
62 3hm2_A Precorrin-6Y C5,15-meth 99.6 2E-14 6.8E-19 133.9 15.1 143 375-553 6-149 (178)
63 3v97_A Ribosomal RNA large sub 99.6 1.1E-14 3.9E-19 164.6 16.0 138 397-551 539-676 (703)
64 1ixk_A Methyltransferase; open 99.6 4.7E-14 1.6E-18 144.8 19.3 150 395-552 116-270 (315)
65 3u81_A Catechol O-methyltransf 99.6 3.8E-14 1.3E-18 137.7 17.5 141 381-551 44-191 (221)
66 3tm4_A TRNA (guanine N2-)-meth 99.6 1.9E-14 6.4E-19 151.3 16.4 145 395-564 215-359 (373)
67 3c0k_A UPF0064 protein YCCW; P 99.6 6.1E-14 2.1E-18 148.6 20.2 162 366-551 188-364 (396)
68 3f4k_A Putative methyltransfer 99.6 5E-14 1.7E-18 139.4 18.3 142 384-556 31-195 (257)
69 3m4x_A NOL1/NOP2/SUN family pr 99.6 3.4E-14 1.2E-18 152.2 18.1 148 395-552 103-258 (456)
70 1wy7_A Hypothetical protein PH 99.6 4.2E-14 1.4E-18 135.5 16.9 142 377-553 29-171 (207)
71 3kkz_A Uncharacterized protein 99.6 3.5E-14 1.2E-18 141.7 16.8 139 387-556 34-195 (267)
72 3a27_A TYW2, uncharacterized p 99.6 3.1E-14 1E-18 143.2 16.3 130 366-533 89-220 (272)
73 2yx1_A Hypothetical protein MJ 99.6 2.8E-14 9.6E-19 147.9 16.3 159 366-567 165-329 (336)
74 4htf_A S-adenosylmethionine-de 99.6 5.2E-14 1.8E-18 141.9 17.6 137 390-556 61-231 (285)
75 3dtn_A Putative methyltransfer 99.6 6.3E-14 2.2E-18 136.8 17.7 134 396-560 43-217 (234)
76 4dmg_A Putative uncharacterize 99.6 4.5E-14 1.5E-18 149.1 17.7 158 366-550 181-350 (393)
77 3njr_A Precorrin-6Y methylase; 99.6 1E-13 3.5E-18 133.2 18.8 124 395-554 53-177 (204)
78 3adn_A Spermidine synthase; am 99.6 4E-14 1.4E-18 143.8 16.2 190 355-568 37-243 (294)
79 1sqg_A SUN protein, FMU protei 99.6 3.2E-13 1.1E-17 144.6 23.3 176 379-569 231-426 (429)
80 3dr5_A Putative O-methyltransf 99.6 3.6E-14 1.2E-18 138.3 14.6 122 379-530 37-161 (221)
81 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.3E-14 8E-19 139.3 12.8 136 396-554 33-174 (218)
82 2qm3_A Predicted methyltransfe 99.5 1.6E-13 5.3E-18 144.3 19.8 131 397-558 172-310 (373)
83 1y8c_A S-adenosylmethionine-de 99.5 1.3E-13 4.4E-18 135.0 17.6 131 397-558 37-226 (246)
84 2ih2_A Modification methylase 99.5 9.3E-15 3.2E-19 155.7 10.1 160 374-552 19-189 (421)
85 1ve3_A Hypothetical protein PH 99.5 1.4E-13 4.7E-18 133.3 17.5 117 383-533 25-143 (227)
86 3bwc_A Spermidine synthase; SA 99.5 1.3E-13 4.4E-18 140.9 18.0 182 365-569 60-257 (304)
87 3mb5_A SAM-dependent methyltra 99.5 7.2E-14 2.5E-18 138.4 15.6 128 396-557 92-222 (255)
88 1l3i_A Precorrin-6Y methyltran 99.5 8.9E-14 3E-18 130.6 15.3 138 379-550 14-153 (192)
89 3bus_A REBM, methyltransferase 99.5 3.6E-13 1.2E-17 134.5 20.7 145 382-556 45-215 (273)
90 3lcc_A Putative methyl chlorid 99.5 4.1E-14 1.4E-18 138.4 13.1 130 397-556 66-206 (235)
91 3ajd_A Putative methyltransfer 99.5 5.5E-14 1.9E-18 141.5 14.3 147 395-551 81-235 (274)
92 1pjz_A Thiopurine S-methyltran 99.5 3.3E-14 1.1E-18 136.5 12.2 133 395-555 20-174 (203)
93 1vl5_A Unknown conserved prote 99.5 1.4E-13 4.9E-18 136.7 17.1 146 376-556 19-189 (260)
94 3gu3_A Methyltransferase; alph 99.5 1E-13 3.4E-18 140.0 16.0 130 396-556 21-189 (284)
95 2yxl_A PH0851 protein, 450AA l 99.5 3.8E-13 1.3E-17 144.8 20.8 165 395-569 257-446 (450)
96 2p7i_A Hypothetical protein; p 99.5 1.1E-13 3.6E-18 135.7 15.0 135 382-555 29-197 (250)
97 3pfg_A N-methyltransferase; N, 99.5 1.5E-13 5E-18 136.8 16.1 150 383-569 37-248 (263)
98 4df3_A Fibrillarin-like rRNA/T 99.5 2.2E-13 7.5E-18 133.2 16.8 129 395-555 75-215 (233)
99 3ujc_A Phosphoethanolamine N-m 99.5 1.7E-13 5.7E-18 136.0 16.0 141 385-556 42-205 (266)
100 3hem_A Cyclopropane-fatty-acyl 99.5 5.2E-13 1.8E-17 135.8 19.8 146 386-555 60-241 (302)
101 3cgg_A SAM-dependent methyltra 99.5 2.2E-13 7.5E-18 128.2 15.8 130 395-558 44-176 (195)
102 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.6E-13 5.5E-18 134.2 15.3 142 396-569 76-231 (233)
103 2gb4_A Thiopurine S-methyltran 99.5 9.7E-14 3.3E-18 138.0 13.9 132 396-554 67-224 (252)
104 2yxd_A Probable cobalt-precorr 99.5 3.2E-13 1.1E-17 125.8 16.6 130 384-552 21-152 (183)
105 2pjd_A Ribosomal RNA small sub 99.5 4.5E-14 1.5E-18 146.7 11.6 137 367-534 166-305 (343)
106 3duw_A OMT, O-methyltransferas 99.5 3.7E-13 1.3E-17 130.5 17.4 120 381-532 44-167 (223)
107 2ex4_A Adrenal gland protein A 99.5 9.8E-14 3.3E-18 136.3 13.4 146 382-556 62-224 (241)
108 3h2b_A SAM-dependent methyltra 99.5 2.6E-13 8.9E-18 129.4 15.9 127 398-559 42-184 (203)
109 3d2l_A SAM-dependent methyltra 99.5 5.5E-13 1.9E-17 130.5 18.5 142 385-559 22-225 (243)
110 3jwh_A HEN1; methyltransferase 99.5 2.2E-13 7.5E-18 131.6 15.4 147 381-552 12-187 (217)
111 1yb2_A Hypothetical protein TA 99.5 6.5E-14 2.2E-18 140.9 12.1 127 396-557 109-237 (275)
112 3sm3_A SAM-dependent methyltra 99.5 2E-13 6.9E-18 132.6 15.1 135 396-556 29-206 (235)
113 2frx_A Hypothetical protein YE 99.5 4.7E-13 1.6E-17 144.8 19.3 168 374-548 94-266 (479)
114 1wxx_A TT1595, hypothetical pr 99.5 2.2E-13 7.4E-18 143.7 16.3 132 397-550 209-349 (382)
115 3g2m_A PCZA361.24; SAM-depende 99.5 1.4E-13 4.7E-18 139.9 14.2 116 389-532 74-190 (299)
116 3g5l_A Putative S-adenosylmeth 99.5 1.4E-13 4.8E-18 136.1 13.9 127 397-557 44-216 (253)
117 1xxl_A YCGJ protein; structura 99.5 4.4E-13 1.5E-17 131.6 17.4 141 381-556 8-173 (239)
118 3ntv_A MW1564 protein; rossman 99.5 2.1E-13 7.3E-18 133.6 15.0 119 380-531 56-175 (232)
119 1fbn_A MJ fibrillarin homologu 99.5 4.1E-13 1.4E-17 131.2 16.8 138 396-569 73-227 (230)
120 3tfw_A Putative O-methyltransf 99.5 7.6E-13 2.6E-17 131.0 18.9 120 381-532 49-170 (248)
121 2o57_A Putative sarcosine dime 99.5 5.6E-13 1.9E-17 135.0 18.2 130 396-555 81-232 (297)
122 2jjq_A Uncharacterized RNA met 99.5 2.7E-13 9.4E-18 144.6 16.5 130 365-534 258-389 (425)
123 2yvl_A TRMI protein, hypotheti 99.5 1.3E-13 4.5E-18 135.6 13.0 147 374-557 51-215 (248)
124 3mgg_A Methyltransferase; NYSG 99.5 3.9E-13 1.3E-17 134.6 16.7 131 396-556 36-197 (276)
125 3l8d_A Methyltransferase; stru 99.5 3.8E-13 1.3E-17 131.7 16.1 138 385-558 42-201 (242)
126 2as0_A Hypothetical protein PH 99.5 1.9E-13 6.5E-18 144.8 14.6 145 366-534 185-337 (396)
127 3e8s_A Putative SAM dependent 99.5 7E-13 2.4E-17 128.0 17.3 135 397-569 52-226 (227)
128 2pwy_A TRNA (adenine-N(1)-)-me 99.5 3.3E-13 1.1E-17 133.6 15.3 127 396-556 95-223 (258)
129 1inl_A Spermidine synthase; be 99.5 4.9E-13 1.7E-17 136.1 16.9 180 366-568 56-250 (296)
130 3vc1_A Geranyl diphosphate 2-C 99.5 6.2E-13 2.1E-17 136.1 17.7 129 396-555 116-267 (312)
131 3lkd_A Type I restriction-modi 99.5 6.8E-13 2.3E-17 145.3 19.0 172 374-549 197-381 (542)
132 3id6_C Fibrillarin-like rRNA/T 99.5 1E-12 3.5E-17 128.6 18.1 143 395-569 74-230 (232)
133 3khk_A Type I restriction-modi 99.5 2E-13 6.9E-18 149.8 14.5 166 374-549 225-419 (544)
134 1xtp_A LMAJ004091AAA; SGPP, st 99.5 3.4E-13 1.2E-17 133.1 14.6 130 396-556 92-237 (254)
135 3e23_A Uncharacterized protein 99.5 2.6E-13 9E-18 130.3 13.5 124 396-556 42-181 (211)
136 1ne2_A Hypothetical protein TA 99.5 5.9E-13 2E-17 126.9 15.3 131 378-548 32-162 (200)
137 1wzn_A SAM-dependent methyltra 99.5 8.3E-13 2.8E-17 130.3 16.8 106 396-532 40-145 (252)
138 1ri5_A MRNA capping enzyme; me 99.5 8.3E-13 2.8E-17 133.3 17.0 114 395-533 62-175 (298)
139 1zx0_A Guanidinoacetate N-meth 99.5 1E-13 3.5E-18 136.0 10.0 138 388-551 51-204 (236)
140 3c3p_A Methyltransferase; NP_9 99.5 3.7E-13 1.3E-17 129.4 13.6 120 379-531 40-159 (210)
141 1g8a_A Fibrillarin-like PRE-rR 99.5 1.5E-12 5.2E-17 126.6 17.8 139 396-569 72-226 (227)
142 3tr6_A O-methyltransferase; ce 99.5 2.7E-13 9.1E-18 131.6 12.3 119 381-531 50-173 (225)
143 3bt7_A TRNA (uracil-5-)-methyl 99.5 8E-13 2.7E-17 138.7 16.6 108 368-481 182-306 (369)
144 1nt2_A Fibrillarin-like PRE-rR 99.5 3E-12 1E-16 123.6 19.3 128 396-557 56-195 (210)
145 3g07_A 7SK snRNA methylphospha 99.5 2E-13 6.8E-18 138.6 11.5 148 397-564 46-280 (292)
146 3hnr_A Probable methyltransfer 99.5 7.6E-13 2.6E-17 127.7 15.1 136 397-569 45-211 (220)
147 1iy9_A Spermidine synthase; ro 99.5 9.8E-13 3.3E-17 132.4 16.3 150 396-568 74-234 (275)
148 3jwg_A HEN1, methyltransferase 99.5 9.5E-13 3.3E-17 127.1 15.7 132 396-552 28-187 (219)
149 2pbf_A Protein-L-isoaspartate 99.5 5.9E-13 2E-17 129.4 14.2 139 364-534 47-195 (227)
150 2okc_A Type I restriction enzy 99.5 2.7E-13 9.2E-18 145.8 12.7 163 376-552 153-334 (445)
151 1kpg_A CFA synthase;, cyclopro 99.4 1.7E-12 5.8E-17 130.8 17.7 140 385-555 51-226 (287)
152 1sui_A Caffeoyl-COA O-methyltr 99.4 4.5E-13 1.5E-17 132.7 13.2 121 380-532 64-190 (247)
153 3gdh_A Trimethylguanosine synt 99.4 9.6E-13 3.3E-17 129.1 14.7 93 383-484 66-158 (241)
154 3dli_A Methyltransferase; PSI- 99.4 4.7E-13 1.6E-17 131.4 12.5 124 396-556 40-183 (240)
155 3orh_A Guanidinoacetate N-meth 99.4 3.5E-13 1.2E-17 132.5 11.4 134 392-551 55-204 (236)
156 2gpy_A O-methyltransferase; st 99.4 8.2E-13 2.8E-17 129.1 13.6 121 378-531 37-159 (233)
157 3r3h_A O-methyltransferase, SA 99.4 1.4E-13 4.8E-18 135.9 8.2 119 381-531 46-169 (242)
158 3ckk_A TRNA (guanine-N(7)-)-me 99.4 9E-13 3.1E-17 129.6 13.7 136 396-551 45-189 (235)
159 2ar0_A M.ecoki, type I restric 99.4 3.6E-13 1.2E-17 148.0 12.0 161 374-548 149-334 (541)
160 2kw5_A SLR1183 protein; struct 99.4 1.7E-12 5.8E-17 123.6 15.3 123 397-555 30-169 (202)
161 3p2e_A 16S rRNA methylase; met 99.4 8.3E-13 2.8E-17 129.0 13.3 137 395-555 22-183 (225)
162 2a14_A Indolethylamine N-methy 99.4 9.2E-13 3.2E-17 131.5 13.9 138 396-556 54-237 (263)
163 3bkw_A MLL3908 protein, S-aden 99.4 1.4E-12 4.7E-17 127.6 14.9 127 396-556 42-213 (243)
164 3ldg_A Putative uncharacterize 99.4 1.9E-12 6.4E-17 136.2 16.8 135 380-537 176-348 (384)
165 3bxo_A N,N-dimethyltransferase 99.4 4.8E-12 1.6E-16 123.4 18.7 150 384-570 28-239 (239)
166 3thr_A Glycine N-methyltransfe 99.4 1.4E-12 4.9E-17 131.7 15.2 116 396-532 56-175 (293)
167 3mq2_A 16S rRNA methyltransfer 99.4 5.6E-13 1.9E-17 128.8 11.3 138 395-555 25-182 (218)
168 3m70_A Tellurite resistance pr 99.4 1.5E-12 5E-17 131.3 14.8 125 397-555 120-258 (286)
169 2r3s_A Uncharacterized protein 99.4 4.8E-12 1.7E-16 130.4 19.0 145 396-570 164-335 (335)
170 2b2c_A Spermidine synthase; be 99.4 1.4E-12 4.8E-17 133.7 14.4 165 366-555 74-249 (314)
171 2qfm_A Spermine synthase; sper 99.4 5.4E-12 1.8E-16 130.2 18.6 183 354-554 143-339 (364)
172 3ou2_A SAM-dependent methyltra 99.4 4.2E-12 1.4E-16 121.9 16.9 122 396-552 45-200 (218)
173 3s1s_A Restriction endonucleas 99.4 3.5E-13 1.2E-17 150.3 10.3 173 374-547 295-487 (878)
174 2avd_A Catechol-O-methyltransf 99.4 1.2E-12 3.9E-17 127.4 12.7 119 381-531 55-178 (229)
175 3k0b_A Predicted N6-adenine-sp 99.4 1.8E-12 6E-17 137.0 15.0 136 380-538 183-356 (393)
176 3g5t_A Trans-aconitate 3-methy 99.4 1.8E-12 6.2E-17 131.6 14.6 118 385-530 24-147 (299)
177 3c3y_A Pfomt, O-methyltransfer 99.4 1.4E-12 4.9E-17 128.2 13.3 120 381-532 56-181 (237)
178 3i9f_A Putative type 11 methyl 99.4 1.8E-12 6.1E-17 119.9 13.2 130 396-568 16-158 (170)
179 2xvm_A Tellurite resistance pr 99.4 2.7E-12 9.3E-17 121.4 14.6 127 397-556 32-172 (199)
180 2b25_A Hypothetical protein; s 99.4 1.6E-12 5.5E-17 134.5 13.9 142 383-557 94-247 (336)
181 3ldu_A Putative methylase; str 99.4 1.1E-12 3.9E-17 138.1 12.9 133 381-538 178-350 (385)
182 3ofk_A Nodulation protein S; N 99.4 2E-12 6.7E-17 124.5 13.4 105 396-532 50-154 (216)
183 1mjf_A Spermidine synthase; sp 99.4 4.1E-12 1.4E-16 128.3 16.3 148 396-569 74-238 (281)
184 3gjy_A Spermidine synthase; AP 99.4 4.1E-12 1.4E-16 129.6 16.3 149 383-557 71-228 (317)
185 2bm8_A Cephalosporin hydroxyla 99.4 9E-13 3.1E-17 129.6 11.1 140 375-552 60-214 (236)
186 1i9g_A Hypothetical protein RV 99.4 3E-12 1E-16 128.5 15.1 131 396-558 98-231 (280)
187 2fk8_A Methoxy mycolic acid sy 99.4 4.2E-12 1.4E-16 130.0 16.4 141 384-555 76-252 (318)
188 2i62_A Nicotinamide N-methyltr 99.4 2.4E-12 8.4E-17 127.5 14.1 139 396-557 55-239 (265)
189 3uwp_A Histone-lysine N-methyl 99.4 1.9E-12 6.4E-17 135.4 13.5 116 386-530 161-286 (438)
190 2g72_A Phenylethanolamine N-me 99.4 2.3E-12 7.9E-17 130.2 13.9 136 397-555 71-254 (289)
191 3gwz_A MMCR; methyltransferase 99.4 1.8E-11 6.3E-16 128.2 21.1 144 396-569 201-368 (369)
192 1qzz_A RDMB, aclacinomycin-10- 99.4 8E-12 2.7E-16 130.9 18.2 143 396-569 181-355 (374)
193 3lbf_A Protein-L-isoaspartate 99.4 6.7E-12 2.3E-16 120.3 16.2 101 396-534 76-176 (210)
194 3axs_A Probable N(2),N(2)-dime 99.4 2.7E-12 9.3E-17 134.9 14.5 105 397-532 52-158 (392)
195 2p35_A Trans-aconitate 2-methy 99.4 2.1E-12 7.3E-17 127.7 13.0 102 396-533 32-133 (259)
196 2yqz_A Hypothetical protein TT 99.4 3.2E-12 1.1E-16 126.6 14.1 118 382-532 22-141 (263)
197 2vdv_E TRNA (guanine-N(7)-)-me 99.4 5.3E-12 1.8E-16 124.6 15.6 133 397-549 49-191 (246)
198 1i1n_A Protein-L-isoaspartate 99.4 4.5E-12 1.5E-16 123.1 14.8 109 395-535 75-185 (226)
199 2dul_A N(2),N(2)-dimethylguano 99.4 3.8E-12 1.3E-16 133.6 15.2 125 376-532 27-164 (378)
200 3ccf_A Cyclopropane-fatty-acyl 99.4 3.7E-12 1.3E-16 127.9 14.1 122 396-555 56-208 (279)
201 2o07_A Spermidine synthase; st 99.4 4.1E-12 1.4E-16 129.7 14.5 137 396-555 94-236 (304)
202 3cbg_A O-methyltransferase; cy 99.4 2.5E-12 8.6E-17 125.9 12.4 120 380-531 57-181 (232)
203 3bkx_A SAM-dependent methyltra 99.4 6.7E-12 2.3E-16 125.4 15.5 135 395-556 41-218 (275)
204 3mcz_A O-methyltransferase; ad 99.4 9.2E-12 3.2E-16 129.4 17.0 143 398-570 180-349 (352)
205 2b9e_A NOL1/NOP2/SUN domain fa 99.4 7.8E-12 2.7E-16 127.8 15.7 148 395-551 100-259 (309)
206 1uir_A Polyamine aminopropyltr 99.4 6.9E-12 2.4E-16 128.6 15.4 153 396-568 76-240 (314)
207 3v97_A Ribosomal RNA large sub 99.4 7.1E-12 2.4E-16 141.7 16.4 161 379-566 171-375 (703)
208 1ej0_A FTSJ; methyltransferase 99.3 9.4E-12 3.2E-16 114.7 14.3 136 396-560 21-164 (180)
209 3cc8_A Putative methyltransfer 99.3 5.6E-12 1.9E-16 121.8 13.3 123 396-556 31-184 (230)
210 3dp7_A SAM-dependent methyltra 99.3 1E-11 3.5E-16 129.9 15.9 145 396-568 178-353 (363)
211 1r18_A Protein-L-isoaspartate( 99.3 6.2E-12 2.1E-16 122.4 13.2 137 365-534 52-196 (227)
212 2yxe_A Protein-L-isoaspartate 99.3 1.2E-11 4.1E-16 119.0 15.0 106 396-536 76-181 (215)
213 2hnk_A SAM-dependent O-methylt 99.3 2.2E-11 7.5E-16 119.5 17.1 120 381-532 46-181 (239)
214 1x19_A CRTF-related protein; m 99.3 3.1E-11 1.1E-15 125.9 19.2 143 396-570 189-359 (359)
215 1dl5_A Protein-L-isoaspartate 99.3 4.5E-12 1.5E-16 130.1 12.5 104 396-534 74-177 (317)
216 3dou_A Ribosomal RNA large sub 99.3 5.7E-12 2E-16 119.8 12.3 153 384-568 11-179 (191)
217 4hg2_A Methyltransferase type 99.3 2.5E-12 8.6E-17 128.1 9.9 108 385-532 28-135 (257)
218 2i7c_A Spermidine synthase; tr 99.3 1.5E-11 5E-16 124.3 15.4 136 396-555 77-219 (283)
219 1tw3_A COMT, carminomycin 4-O- 99.3 2.4E-11 8.4E-16 126.5 17.5 143 396-569 182-355 (360)
220 2pxx_A Uncharacterized protein 99.3 7E-12 2.4E-16 119.9 12.2 144 386-549 32-175 (215)
221 3i53_A O-methyltransferase; CO 99.3 2.8E-11 9.7E-16 124.7 17.4 131 397-557 169-321 (332)
222 1vlm_A SAM-dependent methyltra 99.3 1.5E-11 5.3E-16 118.8 14.3 122 398-562 48-193 (219)
223 3fpf_A Mtnas, putative unchara 99.3 1.1E-11 3.6E-16 125.1 13.4 138 395-569 120-263 (298)
224 3r0q_C Probable protein argini 99.3 8E-12 2.7E-16 131.4 13.1 123 378-530 43-167 (376)
225 3ege_A Putative methyltransfer 99.3 5E-12 1.7E-16 125.9 10.9 131 386-556 22-177 (261)
226 2ip2_A Probable phenazine-spec 99.3 3E-11 1E-15 124.5 17.0 140 399-569 169-333 (334)
227 2fyt_A Protein arginine N-meth 99.3 1.5E-11 5.1E-16 127.5 14.7 117 384-529 50-168 (340)
228 2plw_A Ribosomal RNA methyltra 99.3 2.3E-11 8E-16 115.5 14.7 138 396-562 21-184 (201)
229 2p8j_A S-adenosylmethionine-de 99.3 1.9E-11 6.6E-16 116.7 13.6 107 396-532 22-128 (209)
230 1vbf_A 231AA long hypothetical 99.3 1.8E-11 6.1E-16 119.1 13.5 101 396-536 69-169 (231)
231 1jg1_A PIMT;, protein-L-isoasp 99.3 1.9E-11 6.5E-16 119.6 13.5 104 396-536 90-193 (235)
232 3q7e_A Protein arginine N-meth 99.3 1.4E-11 4.7E-16 128.3 12.5 106 397-530 66-171 (349)
233 3iv6_A Putative Zn-dependent a 99.3 2.5E-11 8.6E-16 120.8 13.3 108 396-535 44-151 (261)
234 1af7_A Chemotaxis receptor met 99.3 2.7E-12 9.3E-17 128.8 5.8 114 397-535 105-255 (274)
235 3ggd_A SAM-dependent methyltra 99.3 9.7E-12 3.3E-16 122.1 9.6 104 396-531 55-162 (245)
236 2y1w_A Histone-arginine methyl 99.3 3.6E-11 1.2E-15 125.0 14.0 117 385-531 37-154 (348)
237 3fzg_A 16S rRNA methylase; met 99.3 7.6E-12 2.6E-16 117.4 7.8 88 382-477 35-122 (200)
238 2aot_A HMT, histamine N-methyl 99.3 3.4E-11 1.1E-15 121.9 13.3 132 397-554 52-218 (292)
239 2zfu_A Nucleomethylin, cerebra 99.2 4E-11 1.4E-15 115.3 12.6 132 384-569 56-190 (215)
240 1g6q_1 HnRNP arginine N-methyl 99.2 4.1E-11 1.4E-15 123.6 13.3 105 397-529 38-142 (328)
241 1u2z_A Histone-lysine N-methyl 99.2 5.4E-11 1.8E-15 126.5 14.5 108 396-531 241-358 (433)
242 4e2x_A TCAB9; kijanose, tetron 99.2 1.4E-11 4.8E-16 131.0 9.3 150 385-568 94-266 (416)
243 2xyq_A Putative 2'-O-methyl tr 99.2 5.7E-11 1.9E-15 120.0 13.1 138 396-567 62-208 (290)
244 2vdw_A Vaccinia virus capping 99.2 3.4E-11 1.1E-15 122.8 11.1 113 397-533 48-170 (302)
245 2gs9_A Hypothetical protein TT 99.2 5.3E-11 1.8E-15 114.0 11.8 100 396-534 35-134 (211)
246 4hc4_A Protein arginine N-meth 99.2 4.1E-11 1.4E-15 125.3 11.7 104 397-529 83-186 (376)
247 2nyu_A Putative ribosomal RNA 99.2 9.5E-11 3.3E-15 110.7 13.3 138 396-562 21-175 (196)
248 1p91_A Ribosomal RNA large sub 99.2 4.2E-11 1.5E-15 119.3 10.6 110 383-534 71-180 (269)
249 3htx_A HEN1; HEN1, small RNA m 99.2 1.4E-10 4.8E-15 129.7 15.1 134 374-533 698-835 (950)
250 3bgv_A MRNA CAP guanine-N7 met 99.2 9.5E-11 3.2E-15 119.7 12.2 115 397-534 34-157 (313)
251 4a6d_A Hydroxyindole O-methylt 99.2 8.5E-10 2.9E-14 114.9 19.5 142 396-569 178-345 (353)
252 3lst_A CALO1 methyltransferase 99.2 2.1E-10 7.3E-15 119.1 14.6 138 396-567 183-345 (348)
253 1yub_A Ermam, rRNA methyltrans 99.2 1.6E-12 5.6E-17 128.4 -2.1 95 377-483 12-106 (245)
254 2h1r_A Dimethyladenosine trans 99.2 7.1E-11 2.4E-15 120.2 9.9 78 396-482 41-118 (299)
255 3opn_A Putative hemolysin; str 99.2 8.2E-12 2.8E-16 122.4 2.8 124 397-556 37-183 (232)
256 1zq9_A Probable dimethyladenos 99.2 4E-11 1.4E-15 121.2 7.9 79 396-482 27-105 (285)
257 2qe6_A Uncharacterized protein 99.1 3.3E-10 1.1E-14 113.8 14.4 108 397-533 77-197 (274)
258 2cmg_A Spermidine synthase; tr 99.1 3E-10 1E-14 113.3 13.8 135 396-568 71-214 (262)
259 2avn_A Ubiquinone/menaquinone 99.1 1.2E-10 4.1E-15 115.7 10.8 111 386-534 44-154 (260)
260 3ll7_A Putative methyltransfer 99.1 3.4E-11 1.2E-15 126.9 6.8 82 396-483 92-176 (410)
261 3ufb_A Type I restriction-modi 99.1 1.8E-10 6.1E-15 126.2 12.6 160 374-548 197-384 (530)
262 3tqs_A Ribosomal RNA small sub 99.1 1.6E-10 5.3E-15 114.9 10.3 88 383-482 18-108 (255)
263 3hp7_A Hemolysin, putative; st 99.1 1.7E-10 5.7E-15 116.4 10.6 122 397-556 85-231 (291)
264 3fut_A Dimethyladenosine trans 99.1 2.7E-10 9.2E-15 114.1 12.1 87 384-483 37-123 (271)
265 3gru_A Dimethyladenosine trans 99.1 2.3E-10 7.7E-15 116.0 11.3 79 396-483 49-127 (295)
266 1qam_A ERMC' methyltransferase 99.1 1.1E-09 3.6E-14 108.2 13.0 86 388-482 20-106 (244)
267 2r6z_A UPF0341 protein in RSP 99.0 8.3E-11 2.9E-15 117.1 4.7 82 397-483 83-174 (258)
268 1fp1_D Isoliquiritigenin 2'-O- 99.0 9.2E-10 3.1E-14 115.3 12.5 127 396-560 208-363 (372)
269 3reo_A (ISO)eugenol O-methyltr 99.0 1.8E-09 6.1E-14 113.1 14.3 127 396-560 202-358 (368)
270 1fp2_A Isoflavone O-methyltran 99.0 9.7E-10 3.3E-14 114.2 11.9 134 396-568 187-351 (352)
271 3sso_A Methyltransferase; macr 99.0 1.1E-09 3.8E-14 114.2 10.9 105 388-531 207-323 (419)
272 1m6y_A S-adenosyl-methyltransf 99.0 7.4E-10 2.5E-14 112.5 9.0 81 396-481 25-109 (301)
273 3p9c_A Caffeic acid O-methyltr 99.0 4.7E-09 1.6E-13 109.7 15.1 125 396-558 200-354 (364)
274 3lcv_B Sisomicin-gentamicin re 98.9 1.4E-09 4.9E-14 106.6 8.9 88 383-478 119-206 (281)
275 1zg3_A Isoflavanone 4'-O-methy 98.9 4.9E-09 1.7E-13 109.1 13.0 133 397-568 193-357 (358)
276 2qy6_A UPF0209 protein YFCK; s 98.9 7.7E-09 2.6E-13 102.7 13.6 148 396-569 59-246 (257)
277 3uzu_A Ribosomal RNA small sub 98.9 2.6E-09 9E-14 107.4 10.1 80 396-482 41-126 (279)
278 3ftd_A Dimethyladenosine trans 98.9 4.6E-09 1.6E-13 103.9 11.0 77 396-482 30-107 (249)
279 2oxt_A Nucleoside-2'-O-methylt 98.9 6.3E-10 2.2E-14 111.1 4.6 109 394-532 71-185 (265)
280 2oyr_A UPF0341 protein YHIQ; a 98.9 1.6E-09 5.5E-14 107.5 6.3 81 399-482 90-176 (258)
281 3giw_A Protein of unknown func 98.9 1.1E-08 3.9E-13 101.8 12.3 124 384-533 63-201 (277)
282 2ld4_A Anamorsin; methyltransf 98.9 3.9E-09 1.3E-13 98.1 8.4 104 396-549 11-128 (176)
283 3o4f_A Spermidine synthase; am 98.9 1E-07 3.5E-12 95.8 19.3 179 367-568 50-243 (294)
284 2wa2_A Non-structural protein 98.9 1.1E-09 3.8E-14 110.0 5.0 108 395-532 80-193 (276)
285 4fzv_A Putative methyltransfer 98.8 5.1E-08 1.8E-12 101.1 15.5 146 395-546 146-302 (359)
286 1qyr_A KSGA, high level kasuga 98.8 3.2E-09 1.1E-13 105.2 5.7 80 396-483 20-103 (252)
287 2p41_A Type II methyltransfera 98.8 4.2E-09 1.5E-13 107.3 6.8 108 395-535 80-194 (305)
288 3frh_A 16S rRNA methylase; met 98.8 2.6E-08 8.9E-13 96.8 10.5 82 384-477 94-175 (253)
289 4azs_A Methyltransferase WBDD; 98.8 1.2E-08 4.2E-13 112.8 9.0 76 396-477 65-141 (569)
290 3cvo_A Methyltransferase-like 98.7 3E-07 1E-11 87.5 14.5 115 397-545 30-169 (202)
291 4gqb_A Protein arginine N-meth 98.6 2E-07 6.9E-12 103.0 11.1 104 398-529 358-464 (637)
292 2oo3_A Protein involved in cat 98.4 2.4E-07 8.1E-12 92.1 6.9 119 398-549 92-218 (283)
293 2k4m_A TR8_protein, UPF0146 pr 98.4 3E-07 1E-11 81.9 6.5 83 376-479 13-99 (153)
294 3ua3_A Protein arginine N-meth 98.4 4.7E-07 1.6E-11 100.0 9.0 106 398-529 410-531 (745)
295 3c6k_A Spermine synthase; sper 98.3 1.1E-05 3.7E-10 83.6 15.2 185 366-569 173-377 (381)
296 3evf_A RNA-directed RNA polyme 98.3 9E-07 3.1E-11 87.3 6.2 150 383-562 60-215 (277)
297 2zig_A TTHA0409, putative modi 98.2 1.1E-06 3.6E-11 89.1 6.7 97 452-553 21-132 (297)
298 2wk1_A NOVP; transferase, O-me 98.2 6.3E-06 2.1E-10 82.5 12.0 128 396-551 105-266 (282)
299 3gcz_A Polyprotein; flavivirus 98.2 8.8E-07 3E-11 87.5 4.4 149 384-562 77-232 (282)
300 1wg8_A Predicted S-adenosylmet 98.1 7E-06 2.4E-10 81.5 9.6 78 395-482 20-101 (285)
301 3r24_A NSP16, 2'-O-methyl tran 98.0 9.4E-05 3.2E-09 73.0 13.9 126 396-557 108-241 (344)
302 1g55_A DNA cytosine methyltran 97.9 3.7E-05 1.3E-09 79.3 11.1 147 398-566 2-164 (343)
303 2zig_A TTHA0409, putative modi 97.9 3.1E-05 1.1E-09 78.2 9.1 58 384-444 222-279 (297)
304 2px2_A Genome polyprotein [con 97.8 1.7E-05 5.6E-10 77.2 5.5 143 381-557 57-210 (269)
305 3vyw_A MNMC2; tRNA wobble urid 97.8 0.00037 1.3E-08 70.2 15.1 147 397-569 96-259 (308)
306 3eld_A Methyltransferase; flav 97.8 2.2E-05 7.6E-10 78.0 6.1 146 384-561 68-221 (300)
307 4auk_A Ribosomal RNA large sub 97.7 0.001 3.4E-08 68.6 17.6 86 379-478 185-278 (375)
308 2c7p_A Modification methylase 97.6 0.00091 3.1E-08 68.4 15.9 143 398-566 11-168 (327)
309 3tka_A Ribosomal RNA small sub 97.6 5.1E-05 1.7E-09 77.1 6.1 80 395-481 55-139 (347)
310 3p8z_A Mtase, non-structural p 97.6 0.0012 4.1E-08 63.3 14.0 121 383-532 64-186 (267)
311 1g60_A Adenine-specific methyl 97.5 0.00013 4.4E-09 72.2 7.4 58 384-444 199-256 (260)
312 3g7u_A Cytosine-specific methy 97.5 0.001 3.5E-08 69.4 14.0 73 399-481 3-82 (376)
313 1boo_A Protein (N-4 cytosine-s 97.4 0.00038 1.3E-08 71.1 9.6 91 452-553 14-116 (323)
314 3lkz_A Non-structural protein 97.4 0.0012 4.2E-08 65.3 12.4 135 383-545 80-217 (321)
315 2efj_A 3,7-dimethylxanthine me 97.4 0.0024 8.3E-08 66.4 14.8 130 398-533 53-226 (384)
316 1i4w_A Mitochondrial replicati 97.3 0.0006 2.1E-08 70.3 9.9 59 398-463 59-117 (353)
317 1g60_A Adenine-specific methyl 97.3 0.00023 8E-09 70.3 6.5 89 453-553 5-95 (260)
318 3b5i_A S-adenosyl-L-methionine 97.2 0.0026 8.8E-08 66.1 12.8 134 398-533 53-226 (374)
319 3qv2_A 5-cytosine DNA methyltr 97.1 0.0031 1.1E-07 64.4 12.1 148 397-566 9-175 (327)
320 4h0n_A DNMT2; SAH binding, tra 97.0 0.002 7E-08 65.9 9.5 147 399-566 4-164 (333)
321 1eg2_A Modification methylase 97.0 0.0014 4.7E-08 66.8 8.2 87 452-552 38-135 (319)
322 3pvc_A TRNA 5-methylaminomethy 96.8 0.0075 2.6E-07 67.9 12.8 132 397-553 58-229 (689)
323 1m6e_X S-adenosyl-L-methionnin 96.6 0.0025 8.4E-08 65.8 6.5 133 397-532 51-209 (359)
324 3ubt_Y Modification methylase 96.5 0.0039 1.3E-07 63.4 7.3 144 399-566 1-158 (331)
325 3ps9_A TRNA 5-methylaminomethy 96.3 0.026 9E-07 63.2 13.6 132 397-553 66-237 (676)
326 2qrv_A DNA (cytosine-5)-methyl 96.3 0.0048 1.6E-07 62.0 6.5 79 396-483 14-96 (295)
327 1boo_A Protein (N-4 cytosine-s 96.2 0.0044 1.5E-07 63.2 5.6 70 386-462 241-310 (323)
328 1eg2_A Modification methylase 96.2 0.0057 1.9E-07 62.2 6.4 58 384-444 229-289 (319)
329 2lw1_A ABC transporter ATP-bin 95.5 0.073 2.5E-06 43.3 9.0 52 4-55 26-79 (89)
330 3me5_A Cytosine-specific methy 95.4 0.012 4.2E-07 63.0 5.4 78 398-482 88-181 (482)
331 2py6_A Methyltransferase FKBM; 94.5 0.085 2.9E-06 55.4 8.6 63 396-460 225-291 (409)
332 3tos_A CALS11; methyltransfera 94.3 0.36 1.2E-05 47.1 12.0 128 396-551 68-241 (257)
333 4dkj_A Cytosine-specific methy 93.8 0.47 1.6E-05 49.5 12.4 46 398-443 10-59 (403)
334 3s2e_A Zinc-containing alcohol 93.0 0.094 3.2E-06 53.2 5.5 94 396-530 165-261 (340)
335 1f8f_A Benzyl alcohol dehydrog 92.6 0.16 5.3E-06 52.3 6.6 43 396-440 189-233 (371)
336 3swr_A DNA (cytosine-5)-methyl 92.6 0.15 5.2E-06 59.2 7.0 77 397-482 539-630 (1002)
337 4ft4_B DNA (cytosine-5)-methyl 92.4 1.5 5.3E-05 49.7 15.1 47 397-443 211-261 (784)
338 2hwk_A Helicase NSP2; rossman 91.7 0.21 7.2E-06 49.0 5.6 73 469-558 205-282 (320)
339 1pl8_A Human sorbitol dehydrog 91.5 0.55 1.9E-05 47.8 9.1 44 395-440 169-214 (356)
340 1e3j_A NADP(H)-dependent ketos 91.1 0.79 2.7E-05 46.6 9.8 44 395-440 166-210 (352)
341 3two_A Mannitol dehydrogenase; 90.8 0.77 2.6E-05 46.5 9.4 67 395-477 174-241 (348)
342 1uuf_A YAHK, zinc-type alcohol 90.7 0.76 2.6E-05 47.2 9.3 44 395-440 192-236 (369)
343 4ej6_A Putative zinc-binding d 90.2 0.76 2.6E-05 47.2 8.8 44 395-440 180-225 (370)
344 4b7c_A Probable oxidoreductase 89.9 0.31 1.1E-05 49.2 5.4 95 395-530 147-246 (336)
345 1v3u_A Leukotriene B4 12- hydr 89.9 0.46 1.6E-05 47.9 6.7 41 396-438 144-186 (333)
346 3m6i_A L-arabinitol 4-dehydrog 89.9 1 3.5E-05 45.8 9.4 45 395-441 177-223 (363)
347 1pqw_A Polyketide synthase; ro 89.7 0.36 1.2E-05 44.6 5.3 42 396-439 37-80 (198)
348 2vz8_A Fatty acid synthase; tr 89.4 0.11 3.7E-06 66.5 1.8 105 396-531 1239-1347(2512)
349 3jv7_A ADH-A; dehydrogenase, n 89.1 0.76 2.6E-05 46.5 7.6 96 395-530 169-268 (345)
350 4fs3_A Enoyl-[acyl-carrier-pro 88.8 1.9 6.4E-05 41.7 9.9 83 397-482 5-98 (256)
351 3av4_A DNA (cytosine-5)-methyl 88.7 0.53 1.8E-05 56.2 6.8 77 397-483 850-942 (1330)
352 2j3h_A NADP-dependent oxidored 88.2 1.5 5E-05 44.3 9.1 42 396-439 154-197 (345)
353 3gms_A Putative NADPH:quinone 88.1 0.38 1.3E-05 48.7 4.6 43 396-440 143-187 (340)
354 1rjw_A ADH-HT, alcohol dehydro 87.9 0.77 2.6E-05 46.4 6.7 44 395-440 162-206 (339)
355 3uog_A Alcohol dehydrogenase; 87.4 0.66 2.3E-05 47.4 6.0 43 396-440 188-231 (363)
356 3goh_A Alcohol dehydrogenase, 87.1 1.2 4.1E-05 44.4 7.5 64 396-476 141-205 (315)
357 3fpc_A NADP-dependent alcohol 86.9 0.35 1.2E-05 49.3 3.4 44 395-440 164-209 (352)
358 1cdo_A Alcohol dehydrogenase; 86.7 2.1 7.2E-05 43.7 9.3 43 396-440 191-235 (374)
359 1piw_A Hypothetical zinc-type 86.5 2.2 7.5E-05 43.4 9.3 44 395-440 177-221 (360)
360 2fzw_A Alcohol dehydrogenase c 86.2 2.5 8.4E-05 43.2 9.5 43 396-440 189-233 (373)
361 1p0f_A NADP-dependent alcohol 86.2 4.3 0.00015 41.3 11.3 43 396-440 190-234 (373)
362 3nx4_A Putative oxidoreductase 85.6 3 0.0001 41.5 9.6 90 400-531 149-240 (324)
363 2h6e_A ADH-4, D-arabinose 1-de 85.6 1.8 6.1E-05 43.7 8.0 44 397-440 170-214 (344)
364 1vj0_A Alcohol dehydrogenase, 85.5 1.9 6.4E-05 44.3 8.2 42 396-439 194-237 (380)
365 2jhf_A Alcohol dehydrogenase E 85.3 2.8 9.7E-05 42.7 9.5 42 396-439 190-233 (374)
366 2hcy_A Alcohol dehydrogenase 1 85.1 2.9 0.0001 42.1 9.3 43 396-440 168-212 (347)
367 4eye_A Probable oxidoreductase 84.8 1.3 4.6E-05 44.7 6.6 43 396-440 158-202 (342)
368 1wma_A Carbonyl reductase [NAD 84.6 2.3 7.9E-05 40.7 8.0 78 398-480 4-92 (276)
369 1e3i_A Alcohol dehydrogenase, 84.5 3.2 0.00011 42.4 9.4 43 396-440 194-238 (376)
370 1yf3_A DNA adenine methylase; 84.5 4.2 0.00014 39.5 9.7 82 452-553 149-234 (259)
371 2uyo_A Hypothetical protein ML 84.4 5.3 0.00018 39.9 10.7 110 398-533 103-219 (310)
372 1jvb_A NAD(H)-dependent alcoho 84.3 5.3 0.00018 40.2 10.9 45 395-440 168-214 (347)
373 3jyn_A Quinone oxidoreductase; 84.3 0.72 2.5E-05 46.3 4.3 43 396-440 139-183 (325)
374 3pxx_A Carveol dehydrogenase; 84.3 4.5 0.00015 39.2 10.0 122 397-531 9-152 (287)
375 1yb5_A Quinone oxidoreductase; 83.9 0.76 2.6E-05 46.8 4.3 42 396-439 169-212 (351)
376 2d8a_A PH0655, probable L-thre 83.7 0.8 2.7E-05 46.4 4.3 42 397-440 167-210 (348)
377 3fwz_A Inner membrane protein 83.5 4.5 0.00016 34.9 8.7 67 399-477 8-78 (140)
378 2eih_A Alcohol dehydrogenase; 83.5 1 3.4E-05 45.6 4.9 43 396-440 165-209 (343)
379 3uko_A Alcohol dehydrogenase c 83.4 4.4 0.00015 41.4 9.9 42 396-439 192-235 (378)
380 4dcm_A Ribosomal RNA large sub 83.2 7.3 0.00025 39.9 11.5 126 383-547 26-152 (375)
381 1lss_A TRK system potassium up 83.0 8.3 0.00028 32.4 10.1 71 398-479 4-78 (140)
382 1zkd_A DUF185; NESG, RPR58, st 82.3 4.9 0.00017 41.5 9.6 47 397-443 80-132 (387)
383 4f3n_A Uncharacterized ACR, CO 82.3 3 0.0001 43.7 8.1 71 374-444 108-188 (432)
384 3okq_A BUD site selection prot 82.3 21 0.0007 31.1 11.9 93 4-96 25-123 (141)
385 3ip1_A Alcohol dehydrogenase, 82.2 2.1 7.2E-05 44.3 6.9 43 396-440 212-256 (404)
386 2zb4_A Prostaglandin reductase 81.9 1.4 4.7E-05 44.8 5.3 43 396-440 157-204 (357)
387 3ek2_A Enoyl-(acyl-carrier-pro 81.9 3.5 0.00012 39.5 8.1 80 397-481 13-103 (271)
388 3fbg_A Putative arginate lyase 81.7 2.6 8.7E-05 42.6 7.2 42 397-440 150-193 (346)
389 2c0c_A Zinc binding alcohol de 81.3 1.6 5.4E-05 44.6 5.5 43 396-440 162-206 (362)
390 1yqd_A Sinapyl alcohol dehydro 81.2 2.6 8.9E-05 43.0 7.1 41 397-439 187-228 (366)
391 2cf5_A Atccad5, CAD, cinnamyl 81.2 1.4 4.7E-05 44.9 4.9 41 397-439 180-221 (357)
392 1qor_A Quinone oxidoreductase; 81.1 1.3 4.5E-05 44.3 4.7 43 396-440 139-183 (327)
393 1rjd_A PPM1P, carboxy methyl t 81.0 11 0.00038 37.9 11.7 64 397-462 97-178 (334)
394 2dpm_A M.dpnii 1, protein (ade 81.0 13 0.00045 36.5 11.9 101 432-554 156-258 (284)
395 2dq4_A L-threonine 3-dehydroge 80.5 0.57 1.9E-05 47.5 1.8 42 397-440 164-207 (343)
396 3qwb_A Probable quinone oxidor 80.5 0.9 3.1E-05 45.7 3.3 43 396-440 147-191 (334)
397 2j8z_A Quinone oxidoreductase; 80.4 1.5 5.1E-05 44.5 4.9 42 396-439 161-204 (354)
398 2b5w_A Glucose dehydrogenase; 80.1 2 6.8E-05 43.6 5.8 39 399-439 174-219 (357)
399 4eez_A Alcohol dehydrogenase 1 79.9 5.4 0.00018 40.0 8.9 45 395-440 161-206 (348)
400 4dvj_A Putative zinc-dependent 78.9 3.4 0.00012 42.0 7.1 95 397-531 171-269 (363)
401 1iz0_A Quinone oxidoreductase; 78.8 2 6.8E-05 42.4 5.2 44 395-440 123-168 (302)
402 1wly_A CAAR, 2-haloacrylate re 78.7 2.1 7.2E-05 42.9 5.4 43 396-440 144-188 (333)
403 3oig_A Enoyl-[acyl-carrier-pro 78.3 8.1 0.00028 37.0 9.3 131 397-532 6-147 (266)
404 4dup_A Quinone oxidoreductase; 77.6 3.3 0.00011 41.9 6.5 43 396-440 166-210 (353)
405 3k31_A Enoyl-(acyl-carrier-pro 77.1 5.7 0.00019 39.0 7.9 129 397-532 29-168 (296)
406 3gaf_A 7-alpha-hydroxysteroid 76.6 5.2 0.00018 38.3 7.3 80 397-481 11-100 (256)
407 2cdc_A Glucose dehydrogenase g 76.4 4.3 0.00015 41.3 7.0 41 398-440 181-225 (366)
408 2g1p_A DNA adenine methylase; 76.3 8.7 0.0003 37.7 8.9 88 452-553 157-244 (278)
409 3grk_A Enoyl-(acyl-carrier-pro 76.3 12 0.00042 36.5 10.2 80 397-481 30-120 (293)
410 3ijr_A Oxidoreductase, short c 75.9 14 0.00047 36.1 10.4 125 397-532 46-182 (291)
411 4eso_A Putative oxidoreductase 75.6 8.2 0.00028 36.9 8.4 122 397-532 7-138 (255)
412 2dph_A Formaldehyde dismutase; 75.4 3.2 0.00011 42.8 5.7 43 395-439 183-227 (398)
413 4fn4_A Short chain dehydrogena 75.3 8.4 0.00029 37.3 8.4 78 397-479 6-93 (254)
414 3edm_A Short chain dehydrogena 75.2 11 0.00039 35.9 9.4 79 397-480 7-96 (259)
415 4fgs_A Probable dehydrogenase 75.0 8.1 0.00028 37.8 8.2 122 397-532 28-159 (273)
416 3llv_A Exopolyphosphatase-rela 74.9 2.4 8.3E-05 36.4 4.0 69 399-479 7-79 (141)
417 1xa0_A Putative NADPH dependen 74.3 4.1 0.00014 40.6 6.1 42 397-440 148-192 (328)
418 1tt7_A YHFP; alcohol dehydroge 73.3 5.6 0.00019 39.6 6.8 42 397-440 149-193 (330)
419 3ic5_A Putative saccharopine d 73.3 8.1 0.00028 31.4 6.8 71 398-480 5-79 (118)
420 3gaz_A Alcohol dehydrogenase s 72.6 3.1 0.00011 41.9 4.8 42 396-440 149-192 (343)
421 4a0s_A Octenoyl-COA reductase/ 71.9 8.6 0.00029 40.2 8.1 43 396-440 219-263 (447)
422 3tqh_A Quinone oxidoreductase; 71.8 34 0.0012 33.6 12.2 43 395-440 150-194 (321)
423 3is3_A 17BETA-hydroxysteroid d 71.7 11 0.00037 36.3 8.2 125 397-532 17-152 (270)
424 3krt_A Crotonyl COA reductase; 71.2 8.8 0.0003 40.3 8.0 43 396-440 227-271 (456)
425 3c85_A Putative glutathione-re 71.1 17 0.00059 32.4 9.1 68 398-477 39-112 (183)
426 3r3s_A Oxidoreductase; structu 71.0 16 0.00053 35.7 9.4 125 397-532 48-185 (294)
427 4a2c_A Galactitol-1-phosphate 70.8 11 0.00039 37.5 8.5 45 395-440 158-203 (346)
428 3uve_A Carveol dehydrogenase ( 70.8 17 0.00059 35.1 9.6 80 397-481 10-115 (286)
429 3h7a_A Short chain dehydrogena 69.8 11 0.00039 35.8 7.9 79 397-481 6-94 (252)
430 3qiv_A Short-chain dehydrogena 68.6 14 0.00048 34.9 8.2 79 397-480 8-96 (253)
431 1kol_A Formaldehyde dehydrogen 68.5 10 0.00035 38.8 7.7 44 395-440 183-228 (398)
432 3tjr_A Short chain dehydrogena 68.3 16 0.00056 35.7 8.9 80 397-481 30-119 (301)
433 3ucx_A Short chain dehydrogena 67.8 20 0.00068 34.2 9.2 79 397-480 10-98 (264)
434 3ksu_A 3-oxoacyl-acyl carrier 67.2 17 0.00059 34.7 8.6 125 397-532 10-147 (262)
435 3lyl_A 3-oxoacyl-(acyl-carrier 66.2 29 0.00098 32.5 9.9 79 398-481 5-93 (247)
436 3v2g_A 3-oxoacyl-[acyl-carrier 66.1 20 0.0007 34.4 8.9 124 397-531 30-164 (271)
437 3ado_A Lambda-crystallin; L-gu 65.9 64 0.0022 32.1 12.6 44 398-444 6-51 (319)
438 3o26_A Salutaridine reductase; 65.7 15 0.0005 35.7 7.9 81 397-481 11-102 (311)
439 2pd4_A Enoyl-[acyl-carrier-pro 65.5 14 0.0005 35.4 7.7 79 398-481 6-95 (275)
440 3o38_A Short chain dehydrogena 64.8 20 0.0007 34.0 8.6 81 397-481 21-112 (266)
441 2eez_A Alanine dehydrogenase; 64.8 10 0.00035 38.6 6.7 74 397-480 165-239 (369)
442 3f1l_A Uncharacterized oxidore 64.2 30 0.001 32.6 9.7 80 397-480 11-102 (252)
443 2vn8_A Reticulon-4-interacting 63.9 10 0.00034 38.6 6.5 41 396-439 182-224 (375)
444 3rkr_A Short chain oxidoreduct 63.9 15 0.00052 35.0 7.5 79 397-480 28-116 (262)
445 1ae1_A Tropinone reductase-I; 63.8 20 0.00069 34.4 8.4 80 397-481 20-110 (273)
446 1pjc_A Protein (L-alanine dehy 63.2 14 0.00047 37.6 7.3 43 398-442 167-210 (361)
447 3sju_A Keto reductase; short-c 63.1 29 0.001 33.4 9.5 79 398-481 24-112 (279)
448 3l4b_C TRKA K+ channel protien 63.0 13 0.00044 34.5 6.6 67 400-477 2-72 (218)
449 3v8b_A Putative dehydrogenase, 62.9 18 0.00063 35.0 7.9 79 397-480 27-115 (283)
450 2ae2_A Protein (tropinone redu 62.8 20 0.00069 34.0 8.1 79 398-481 9-98 (260)
451 2h7i_A Enoyl-[acyl-carrier-pro 62.8 12 0.00041 35.9 6.5 77 398-481 7-98 (269)
452 3abi_A Putative uncharacterize 62.7 7.3 0.00025 39.6 5.1 72 396-480 14-88 (365)
453 4g65_A TRK system potassium up 62.7 7.3 0.00025 41.2 5.2 68 398-476 3-74 (461)
454 3dmg_A Probable ribosomal RNA 62.6 24 0.00081 36.1 9.0 130 371-545 22-153 (381)
455 3trk_A Nonstructural polyprote 62.4 5.9 0.0002 38.4 3.9 77 464-557 205-286 (324)
456 1yb1_A 17-beta-hydroxysteroid 62.2 35 0.0012 32.6 9.8 80 397-481 30-119 (272)
457 3pid_A UDP-glucose 6-dehydroge 62.1 15 0.00053 38.3 7.5 124 399-547 37-170 (432)
458 2vhw_A Alanine dehydrogenase; 61.8 13 0.00046 37.9 7.0 40 397-440 167-209 (377)
459 3tfo_A Putative 3-oxoacyl-(acy 61.7 28 0.00094 33.4 8.9 79 398-481 4-92 (264)
460 4g81_D Putative hexonate dehyd 61.5 20 0.00068 34.6 7.7 80 397-481 8-97 (255)
461 2wyu_A Enoyl-[acyl carrier pro 61.4 16 0.00056 34.7 7.2 79 398-481 8-97 (261)
462 3gqv_A Enoyl reductase; medium 61.2 9.9 0.00034 38.6 5.8 42 396-440 163-206 (371)
463 1gqe_A Release factor 2, RF2; 61.1 54 0.0018 33.3 11.0 94 3-99 5-113 (365)
464 1zem_A Xylitol dehydrogenase; 61.1 23 0.00079 33.6 8.2 78 398-480 7-94 (262)
465 3u5t_A 3-oxoacyl-[acyl-carrier 60.9 16 0.00055 35.1 7.0 80 397-481 26-116 (267)
466 3awd_A GOX2181, putative polyo 60.8 31 0.0011 32.3 9.1 80 397-481 12-101 (260)
467 3imf_A Short chain dehydrogena 60.5 15 0.00053 34.8 6.8 78 398-480 6-93 (257)
468 2jah_A Clavulanic acid dehydro 60.3 26 0.00089 33.0 8.4 79 398-481 7-95 (247)
469 2rhc_B Actinorhodin polyketide 60.3 25 0.00086 33.8 8.4 79 398-481 22-110 (277)
470 3t7c_A Carveol dehydrogenase; 59.4 26 0.00088 34.2 8.4 80 397-481 27-128 (299)
471 3ioy_A Short-chain dehydrogena 58.6 31 0.0011 34.0 8.9 82 397-481 7-98 (319)
472 2aef_A Calcium-gated potassium 58.6 30 0.001 32.3 8.3 66 398-477 9-78 (234)
473 1id1_A Putative potassium chan 58.4 27 0.00094 30.1 7.5 70 399-477 4-78 (153)
474 1gu7_A Enoyl-[acyl-carrier-pro 58.3 29 0.00099 34.8 8.7 37 396-434 165-204 (364)
475 2c07_A 3-oxoacyl-(acyl-carrier 58.3 45 0.0015 32.0 9.9 79 398-481 44-132 (285)
476 1fmc_A 7 alpha-hydroxysteroid 58.1 24 0.00082 33.0 7.7 79 398-481 11-99 (255)
477 3lay_A Zinc resistance-associa 57.9 23 0.00077 32.2 6.9 40 10-51 92-131 (175)
478 3sx2_A Putative 3-ketoacyl-(ac 57.7 34 0.0012 32.7 8.8 80 397-481 12-113 (278)
479 4fc7_A Peroxisomal 2,4-dienoyl 57.5 32 0.0011 33.1 8.5 80 397-480 26-115 (277)
480 3r1i_A Short-chain type dehydr 57.4 19 0.00065 34.8 6.9 80 397-481 31-120 (276)
481 1g0o_A Trihydroxynaphthalene r 57.4 27 0.00093 33.6 8.1 79 398-481 29-118 (283)
482 3l77_A Short-chain alcohol deh 57.3 46 0.0016 30.7 9.5 79 399-481 3-91 (235)
483 3svt_A Short-chain type dehydr 57.3 26 0.0009 33.6 7.9 82 397-480 10-101 (281)
484 3err_A Fusion protein of micro 57.0 40 0.0014 36.2 9.8 80 16-108 137-217 (536)
485 4da9_A Short-chain dehydrogena 56.8 34 0.0012 32.9 8.7 79 397-480 28-117 (280)
486 4gkb_A 3-oxoacyl-[acyl-carrier 56.8 16 0.00055 35.2 6.1 78 397-480 6-93 (258)
487 3lf2_A Short chain oxidoreduct 56.5 51 0.0017 31.3 9.8 82 397-481 7-98 (265)
488 1iy8_A Levodione reductase; ox 56.2 27 0.00092 33.2 7.7 81 398-481 13-103 (267)
489 4egf_A L-xylulose reductase; s 56.0 22 0.00076 33.9 7.1 81 397-481 19-109 (266)
490 3iht_A S-adenosyl-L-methionine 56.0 22 0.00076 31.7 6.2 114 385-530 28-145 (174)
491 3rku_A Oxidoreductase YMR226C; 56.0 62 0.0021 31.2 10.5 81 397-480 32-125 (287)
492 3pgx_A Carveol dehydrogenase; 55.9 32 0.0011 33.0 8.2 80 397-481 14-116 (280)
493 2g1u_A Hypothetical protein TM 55.4 61 0.0021 27.9 9.4 70 397-477 18-91 (155)
494 3cxt_A Dehydrogenase with diff 55.3 38 0.0013 32.9 8.7 79 397-480 33-121 (291)
495 3dqp_A Oxidoreductase YLBE; al 54.3 19 0.00064 33.0 6.0 69 400-481 2-74 (219)
496 3oec_A Carveol dehydrogenase ( 54.1 29 0.001 34.1 7.8 80 397-481 45-146 (317)
497 3tsc_A Putative oxidoreductase 54.1 58 0.002 31.1 9.8 80 397-481 10-112 (277)
498 2p91_A Enoyl-[acyl-carrier-pro 54.1 35 0.0012 32.8 8.2 80 397-481 20-110 (285)
499 3pi7_A NADH oxidoreductase; gr 54.0 6.2 0.00021 39.7 2.8 40 399-440 166-207 (349)
500 1geg_A Acetoin reductase; SDR 53.9 37 0.0013 32.0 8.3 78 399-481 3-90 (256)
No 1
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=100.00 E-value=1.8e-93 Score=723.43 Aligned_cols=309 Identities=41% Similarity=0.670 Sum_probs=304.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHH
Q psy2395 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINL 84 (570)
Q Consensus 5 ~~~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~~D~~~~~~a~~e~~~ 84 (570)
|+++|+.+.+|+++|+++|++|+||+|++++++++||++.|+++++.|++|.+..+|++++.+|+.|++|+++|.+|+..
T Consensus 1 ~~~~l~~~~~r~~el~~~~~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~~~~~~~el~~D~e~~~~a~~e~~~ 80 (354)
T 3d5a_X 1 MLDKLDRLEEEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAEREA 80 (354)
T ss_dssp CHHHHHHHTHHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhcCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCCceEEEE
Q psy2395 85 AKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIA 164 (570)
Q Consensus 85 ~~~~~~~~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 164 (570)
+++++++++.+|..+|+|++|+|.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++++.+|+|+|++
T Consensus 81 l~~~~~~le~~l~~lLlp~~~~D~~n~ileI~aGaGG~Ea~~fa~~L~rMY~r~ae~~g~k~ev~~~~~~~~gG~k~v~~ 160 (354)
T 3d5a_X 81 LLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMGFETEVLDSHPTDLGGFSKVVF 160 (354)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCCCCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCccccceEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccchhhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccccceE
Q psy2395 165 RIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244 (570)
Q Consensus 165 ~~~g~~~~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v 244 (570)
.|+|++||++||+|+|||||||||||+++||+||||++|+|+|++++++ +.|+++||+++|+|||||||||||||+|||
T Consensus 161 ~i~G~~ayg~Lk~E~GvHRvqRvp~~es~gR~hTS~asV~V~P~~~~~~-i~i~~~dl~i~~~RssG~GGQ~VNkt~SaV 239 (354)
T 3d5a_X 161 EVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATVAVLPKAEEED-FALNMDEIRIDVMRASGPGGQGVNTTDSAV 239 (354)
T ss_dssp EEESTTHHHHHGGGCSEEEEEECCSSCSSCCCEEEEEEEEEEECCCCCC-CCCCGGGEEEEEECCCSCCHHHHHHCCCEE
T ss_pred EEECccHHHHHHhccCeeEEEecCCcCCCCcCccCceEEEEeccCcccc-cccCccceEEEeecCCCCCCcccccccceE
Confidence 9999999999999999999999999999999999999999999998865 999999999999999999999999999999
Q ss_pred EEEecCCceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 245 ~~~h~p~gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
||+|+||||+|+||++|||++||+.|+++|+++|++++.++++++.+..|+.+++.++||++|||||||+
T Consensus 240 rl~HlPtgivv~~q~~RSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~i~~g~rse~IRtYnf~q 309 (354)
T 3d5a_X 240 RVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNFPQ 309 (354)
T ss_dssp EEEETTTTEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGGSCSSEEEETTT
T ss_pred EEEEcCCeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCeeeEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
No 2
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=100.00 E-value=5.2e-93 Score=722.91 Aligned_cols=311 Identities=42% Similarity=0.692 Sum_probs=269.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhC----ChhHHHHH
Q psy2395 3 HLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLN----DLEMRNFA 78 (570)
Q Consensus 3 ~~~~~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~~----D~~~~~~a 78 (570)
+++..+++.+.+|+++|+++|++|+||+|++++++++||++.|+++++.|++|.+..+|++++.+|+. |++|+++|
T Consensus 13 ~~~~~~l~~~~~r~~el~~~l~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~d~~~~~el~~~~e~D~e~~~~a 92 (371)
T 1zbt_A 13 MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEMIKDASGDPELEEMA 92 (371)
T ss_dssp CCHHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHH
T ss_pred hhHHhhHHHHHHHHHHHHHHhcCCcchhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999983 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCC
Q psy2395 79 LDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGG 158 (570)
Q Consensus 79 ~~e~~~~~~~~~~~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g 158 (570)
.+|+..+++++++++.+|..+|+|++|+|.++|+|||+||+||+||++||+|||+||++||+++||++++++.++++.+|
T Consensus 93 ~~e~~~l~~~l~~le~~l~~lLlp~~~~D~~naileI~aGaGG~EA~~fa~~L~rMY~r~Ae~~g~kvevl~~~~~~~gG 172 (371)
T 1zbt_A 93 KEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGG 172 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCCTTTTSCEEEEEEECTTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccceEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeccchhhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccc
Q psy2395 159 YKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238 (570)
Q Consensus 159 ~~~~~~~~~g~~~~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vn 238 (570)
+|+|++.|+|++||++||+|+|||||||||||+++||+||||++|+|+|++++++ +.|+++||+++|+|||||||||||
T Consensus 173 ~ksv~~~I~G~~ayg~Lk~EsGvHRvqRvp~tes~gR~hTS~asV~V~Pe~~ev~-i~I~~~dl~i~~~RssGpGGQ~VN 251 (371)
T 1zbt_A 173 LKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVE-YEIDPKDLRVDIYHASGAGGQNVN 251 (371)
T ss_dssp EEEEEEEEESTTHHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEEEEECCCGGG-SCCCGGGEEEEEECC---------
T ss_pred ceEEEEEEECccHHHHHhhccCeEEEEeecCCCCCCcccccceEEEEeccccccc-cccCcCcEEEEEecCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999998865 999999999999999999999999
Q ss_pred cccceEEEEecCCceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 239 k~~s~v~~~h~p~gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
||+|||||+|+||||+|+||++|||++||+.|+++|+++|++++.++++++.+..|+.+++.++||++||||||++
T Consensus 252 kt~SaVrlthlPtGivV~~q~eRSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~ig~g~Rse~IRtYnf~q 327 (371)
T 1zbt_A 252 KVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQ 327 (371)
T ss_dssp CCCCEEEEEETTTTEEEEECSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC----CCSCSCTTSEEEEEETTT
T ss_pred ccceeEEEEECCCeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCeeeEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
No 3
>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1
Probab=100.00 E-value=2.3e-94 Score=731.57 Aligned_cols=314 Identities=51% Similarity=0.797 Sum_probs=255.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHH
Q psy2395 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALD 80 (570)
Q Consensus 1 ~~~~~~~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~~D~~~~~~a~~ 80 (570)
|+|+|+++|+.+.+|+++|+++|++|+||+|++++++++|+++.|+++++.|++|.+..+|++++.+|++|++|+++|.+
T Consensus 1 m~~~~~~~l~~~~~r~~el~~~~~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~~~~~~~el~eD~e~~~~a~~ 80 (360)
T 2b3t_B 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQD 80 (360)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHTTSSCCSSHHHHHHHHHHHHHHHHHHHHHTTCC---------------------
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCchhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCCce
Q psy2395 81 EINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYK 160 (570)
Q Consensus 81 e~~~~~~~~~~~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g~~ 160 (570)
|+..+++++++++.+|+.+++|++|+|.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++++.+|+|
T Consensus 81 e~~~l~~~~~~le~~l~~~ll~~~~~D~~n~ileI~aGaGG~Ea~~fa~~L~rMY~r~ae~~g~k~ev~~~~~~~~gG~k 160 (360)
T 2b3t_B 81 ELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK 160 (360)
T ss_dssp --------------CCCCCCCSCCSGGGSCEEEEEEECSSSHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECTTSSEE
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCccccceEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCce
Confidence 99999999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccchhhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccc
Q psy2395 161 EIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240 (570)
Q Consensus 161 ~~~~~~~g~~~~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~ 240 (570)
+|++.|+|++||++||+|+|||||||||||+++||+||||++|+|+|++++++.+.|+++||+++|+|||||||||||||
T Consensus 161 ~~~~~i~G~~ayg~Lk~E~GvHRvqRvp~~es~gR~hTS~asV~V~Pe~~~~e~i~i~~~dl~i~~~RssG~GGQ~VNkt 240 (360)
T 2b3t_B 161 EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTT 240 (360)
T ss_dssp EEEEEECSSSCHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEECCBCCCTTTCCCCCSSSEEEEECCSSCCCTTTCCCS
T ss_pred EEEEEEEcccHHHHHHhccCeEEEEecCCCcccCcCCccceEEEEecCcccccccccChhheEEeeecCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999998764388999999999999999999999999
Q ss_pred cceEEEEecCCceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 241 ~s~v~~~h~p~gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
+|||||+|+||||+|+||++|||++||+.|+++|+++|++++.++++++.+..|+.+++.++||++||||||++
T Consensus 241 ~saVrl~hlPtGivv~~q~~RSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~i~~g~rse~IRtYnf~~ 314 (360)
T 2b3t_B 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQ 314 (360)
T ss_dssp SEEEEEEETTTCCEEEEEESSCHHHHHHHHHHHHHHHHTTTTTTSCC------CCC-------CCEEEEEETTT
T ss_pred cceEEEEECCCeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCeeeEECCC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999987
No 4
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=100.00 E-value=5.4e-90 Score=701.94 Aligned_cols=303 Identities=38% Similarity=0.530 Sum_probs=291.2
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHH
Q psy2395 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML---NDLEMRNFALDEIN 83 (570)
Q Consensus 7 ~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~---~D~~~~~~a~~e~~ 83 (570)
-+++.+.+|+++|+++|++|+||+|++++++++||++.|+++|+.|++|....+|++++.+|+ +|++|+++|.+|+.
T Consensus 25 ~~l~~~~~r~~el~~~~~~p~~w~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~d~~~~~el~~~e~D~e~~~~a~~e~~ 104 (365)
T 1gqe_A 25 LDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAELD 104 (365)
T ss_dssp TTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 368889999999999999999999999999999999999999999999999999999999998 39999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCCceEEE
Q psy2395 84 LAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEII 163 (570)
Q Consensus 84 ~~~~~~~~~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 163 (570)
.++++++.++ ..+||+||+|.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++++.+|+|+|+
T Consensus 105 ~l~~~l~~le----~~~ll~~~~D~~naileI~aGaGG~Ea~~fa~~L~rMY~r~Ae~~g~k~evl~~~~~e~~G~Ks~~ 180 (365)
T 1gqe_A 105 ALEEKLAQLE----FRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVT 180 (365)
T ss_dssp HHHHHHHHHG----GGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSSEEEEE
T ss_pred HHHHHHHHHH----HHHccCCcccccceEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCceeEEE
Confidence 9999999988 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccchhhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccccce
Q psy2395 164 ARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243 (570)
Q Consensus 164 ~~~~g~~~~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~ 243 (570)
+.|+|++||++||+|+|||||||||||+++||+||||++|+|+|++++..++.|+++||+++|+|||||||||||||+||
T Consensus 181 ~~I~G~~ayg~Lk~EsGvHRvqRvs~~es~gRrhTS~asV~V~Pe~~~~v~i~i~~~dl~~~~~RssG~GGQ~VNkt~sa 260 (365)
T 1gqe_A 181 IKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 260 (365)
T ss_dssp EEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEEECCCCSSCCSTTSSCCE
T ss_pred EEEECcCHHHHhhhccceEEEEEeCCCCCcCCCCcceeEEEEecCCCcccccccCHHHceEeeecCCCCCCCcccCccce
Confidence 99999999999999999999999999999999999999999999997644599999999999999999999999999999
Q ss_pred EEEEecCCceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 244 v~~~h~p~gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
|||+|+||||+|+||++|||++||+.|+++|+++|++.+.+++.++.+..|+.+... .||++||||||++
T Consensus 261 Vrl~HiPtgivv~~q~~RSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~~~i-~~G~~IRtY~f~~ 330 (365)
T 1gqe_A 261 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDI-GWGSQIRSYVLDD 330 (365)
T ss_dssp EEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCC-CSCSEEEEEEGGG
T ss_pred EEEEECCCeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-CccCCeEeEECCC
Confidence 999999999999999999999999999999999999999999999988888865544 5999999999987
No 5
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00 E-value=2.4e-88 Score=688.61 Aligned_cols=300 Identities=32% Similarity=0.464 Sum_probs=286.7
Q ss_pred HHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH-hhCChhHHHHHHHHHHHHH
Q psy2395 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE-MLNDLEMRNFALDEINLAK 86 (570)
Q Consensus 8 ~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~-l~~D~~~~~~a~~e~~~~~ 86 (570)
+|+.+.+|+++|+++|++|+||+|++++++++++++.|+++|+.|++|....+|++++.+ |+.+++ ++|.+|+..+.
T Consensus 18 ~l~~~~~r~~ele~~l~~p~~w~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~d~~~~~e~l~~eed--~~a~~e~~~l~ 95 (365)
T 2ihr_1 18 DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELMEELPAEER--EALKPELEEAA 95 (365)
T ss_dssp SHHHHHHHHTTTTTSTTCGGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHHHTTCSCCTTG--GGTGGGTHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH--HHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999999 986545 88999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCCceEEEEEE
Q psy2395 87 KRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI 166 (570)
Q Consensus 87 ~~~~~~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 166 (570)
+++++++ ..+||++|+|.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++++.+|+|+|++.|
T Consensus 96 ~~~~~le----~~~ll~~~~D~~~aileI~aGaGG~Ea~~fa~~L~rMY~r~Ae~~g~k~evl~~~~~~~gG~ks~~~~I 171 (365)
T 2ihr_1 96 KKLDELY----HQTLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILV 171 (365)
T ss_dssp HHHHHHH----HHHHTCSSSTTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHHHHH----HHHhcCCcccccCeEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCeEEEEEEE
Confidence 9999988 668889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccccceEEE
Q psy2395 167 IGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246 (570)
Q Consensus 167 ~g~~~~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~ 246 (570)
+|++||++||+|+|||||||||||+++||+||||++|+|+|++++..++.|+++||+++|+|||||||||||||+|||||
T Consensus 172 ~G~~ayg~Lk~E~GvHRvqRvs~~es~gRrhTS~asV~V~P~~~~~~~i~i~~~dl~i~~~RssG~GGQ~VNkt~saVrl 251 (365)
T 2ihr_1 172 KGENAYGLLSPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSAVRV 251 (365)
T ss_dssp ESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEEECCSSSSCCCCGGGEEEEEECCCCSSCCSGGGSCSEEEE
T ss_pred EccCHHHhhhhCcCEEEEEEeCCCCccCCccceeEEEEEecCCCcccccccCccceEEEEeecCCCCCceecccceEEEE
Confidence 99999999999999999999999999999999999999999997655589999999999999999999999999999999
Q ss_pred EecCCceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 247 ~h~p~gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
+|+||||+|+||++|||++||+.|+++|+++|++.+.++++++.+..|+.+... .||++||||||++
T Consensus 252 ~h~Ptgivv~~q~~RSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~~~i-~~G~~IRtYnf~~ 318 (365)
T 2ihr_1 252 VHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPI-EWGSQIRSYVLDK 318 (365)
T ss_dssp EETTTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCSCCS-CCCSCSEEEEGGG
T ss_pred EEcCCeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CccCCeeeEECCC
Confidence 999999999999999999999999999999999999999999999998654433 4899999999987
No 6
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A
Probab=100.00 E-value=9.3e-85 Score=655.82 Aligned_cols=288 Identities=41% Similarity=0.646 Sum_probs=260.1
Q ss_pred HHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCh-hHHHHHHHHHHHHHHHHHH
Q psy2395 13 SKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDL-EMRNFALDEINLAKKRIFD 91 (570)
Q Consensus 13 ~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~~D~-~~~~~a~~e~~~~~~~~~~ 91 (570)
.+|+++|+++|++|+| |++++++++||++.|+++++.|++|. +++++.+|+.++ |- .+|+..+++++++
T Consensus 2 ~~r~~el~~~~~~p~~--d~~~~~~~~ke~~~l~~~v~~~~~~~----~~~~~~~l~~e~~D~----~~e~~~l~~~l~~ 71 (342)
T 1rq0_A 2 KEKKKEIEKLLARPDL--TPEQMKNYGMEYAKIEEIENITNRIK----ETQEFIELLREEGEN----ELEIEKYEKELDQ 71 (342)
T ss_dssp TTTTTHHHHHHHSSCC--CHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTTTTTTTTC----CSCHHHHHHHHHH
T ss_pred hHHHHHHHHHhhCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH----hHHHHHHHHHhcCCH----HHHHHHHHHHHHH
Confidence 4678999999999999 99999999999999999999999998 777788887421 21 7889999999999
Q ss_pred HHHHHHHhcCCCCcCCccceEEEEEcCCCchHHHHHHHHHHHHHHHHHHhcCCEEEEEEecccCCCCceEEEEEEeccch
Q psy2395 92 IELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNV 171 (570)
Q Consensus 92 ~~~~l~~~ll~~~~~d~~~~~lei~~g~Gg~E~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 171 (570)
++++|+.+|+| +|.++|+|||+||+||+||++||+|||+||.+||+++||++++++.++++.+|+|+|++.|+|++|
T Consensus 72 le~~l~~lL~p---~D~~~aileI~aGaGG~Ea~~fa~~L~rMY~r~ae~~g~kvevl~~~~~~~gG~ks~~~~I~G~~a 148 (342)
T 1rq0_A 72 LYQELLFLLSP---EASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVKGKNA 148 (342)
T ss_dssp HHHHHHHHHSC---SSCSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEECTTSCEEEEEEEEESTTH
T ss_pred HHHHHHHhcCc---cccCCeEEEEEcCCCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCCccEEEEEEEECcCH
Confidence 99999888875 558999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCcceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccccceEEEEecCC
Q psy2395 172 YSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT 251 (570)
Q Consensus 172 ~~~~~~e~G~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~~h~p~ 251 (570)
|++||+|+|||||||||||+++||+||||++|+|+|++++++ +.|+++||+++|+|||||||||||||+|||||+|+||
T Consensus 149 yg~Lk~E~GvHRvqRvp~~es~gR~hTS~asV~V~Pe~~~~~-i~i~~~dl~i~~~RssGpGGQ~VNKt~SaVrl~hlPt 227 (342)
T 1rq0_A 149 YGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEKD-IEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPT 227 (342)
T ss_dssp HHHHGGGCEEEEEEECCTTSCSCCCEEEEEEEEEEECCCGGG-SCCCGGGEEEEEECCCC----CCSSSSEEEEEEETTT
T ss_pred HHHHhhccCeEEEEecCCcccCCCCcccceEEEEeccccccc-cccChhHeEEEeecCCCCCCcccccccceEEEEECCC
Confidence 999999999999999999999999999999999999998865 9999999999999999999999999999999999999
Q ss_pred ceEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcccccCCCCccchhhh
Q psy2395 252 GIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNI 314 (570)
Q Consensus 252 gi~~~~~~~rsq~~n~~~a~~~l~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~iR~y~~~~ 314 (570)
||+|+||++|||++||+.|+++|+++|++++.+++.++.+..|+.+++.++||++||||||++
T Consensus 228 Givv~~q~~RSQ~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~r~~~i~~g~Rse~IRtYnf~~ 290 (342)
T 1rq0_A 228 GIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNFPQ 290 (342)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC----------CCCEEEEEETTT
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCeEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999987
No 7
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=100.00 E-value=1.6e-36 Score=307.00 Aligned_cols=254 Identities=38% Similarity=0.643 Sum_probs=231.5
Q ss_pred chhhhhhHhhhccCcceeeechhhhchHHHHHHHHHHHHHHhcCCCceeecCcccccCeeeeecCCccccchhHHHHHHH
Q psy2395 310 FETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDL 389 (570)
Q Consensus 310 y~~~~LL~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~ 389 (570)
.....+++++++.++..++.+...+++.++.+.+..++.++..+.|++|++|..+||+..|.+++++|+|+|+++.+++.
T Consensus 22 ~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~g~~~f~~~~~~~~~~~~ipr~~te~l~~~ 101 (276)
T 2b3t_A 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQ 101 (276)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTTTCBCCHHHHHHHHHHHHHHHTTCCHHHHSCEEEETTEEEECCTTSCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCChhHeeeeeEECCceEEeCCCCcccCchHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCC
Q psy2395 390 IVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKK 469 (570)
Q Consensus 390 ~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 469 (570)
++.....++.+|||+|||+|.+++.++...+ +.+|+|+|+|+.+++.|++|+..++. .+++++++|+.+..+ .+
T Consensus 102 ~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~~~~--~~ 175 (276)
T 2b3t_A 102 ALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFSALA--GQ 175 (276)
T ss_dssp HHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTGGGT--TC
T ss_pred HHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhhhcc--cC
Confidence 9887545567999999999999999998765 58999999999999999999987532 269999999987543 36
Q ss_pred ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCC
Q psy2395 470 LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGF 549 (570)
Q Consensus 470 ~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf 549 (570)
+||+|++||||+.....+....+..|+|..+++++.+|++.+..+++.+.++|+|||+++++++..+.+.+.+++.+.||
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf 255 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGY 255 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTC
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCC
Confidence 89999999999987765555667789999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCceEEEEEe
Q psy2395 550 SDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 550 ~~i~~~~D~~g~~R~~~~~~ 569 (570)
..+.+++|++|.+|+++++|
T Consensus 256 ~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 256 HDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp TTCCEEECTTSSEEEEEEEC
T ss_pred cEEEEEecCCCCCcEEEEEE
Confidence 99999999999999999986
No 8
>2rsm_A Probable peptide chain release factor C12ORF65 HO mitochondrial; GGQ domain, translation; NMR {Mus musculus}
Probab=100.00 E-value=1.4e-37 Score=261.78 Aligned_cols=101 Identities=32% Similarity=0.448 Sum_probs=96.9
Q ss_pred cceeEEeCCCCCCCcccccceeEEEecCCCcccccccCCCCeEEEEeeccCCCCcccccccceEEEEecCCceEEEEecc
Q psy2395 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQND 260 (570)
Q Consensus 181 ~hr~~r~~~~~~~~~~~ts~~~v~~~p~~~~~~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~~h~p~gi~~~~~~~ 260 (570)
-|||||+|+|+++| ||+++|.|+|+.++...+.|+++||+++|+|||||||||||||+|||||+|+||||+|+||++
T Consensus 10 g~rvqrvp~tes~g---ts~~~v~v~p~~d~~~~l~I~~~dl~~~~~RssGpGGQ~VNKt~SaVrl~H~PTGivV~~q~~ 86 (115)
T 2rsm_A 10 GLRLQEKPALLFPG---MAASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQT 86 (115)
T ss_dssp CCCCCCCCCCCCCC---CCCCCCCCCSCCCCCCSCCCCGGGCEEEECSCCCSCSSSCCCSCCCEEEECTTTCCEEEECCS
T ss_pred ceeEEecCcccCCc---cceEEEEeccccCCCccCCcCHHHeEEEEeeCCCCCccccCccceeEEEecCCCCcEEEEcCC
Confidence 38999999999999 999999999999887779999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Q psy2395 261 RSQHKNKAFALKILLARIKDSKLR 284 (570)
Q Consensus 261 rsq~~n~~~a~~~l~~~l~~~~~~ 284 (570)
|||++||+.|+++|++||++....
T Consensus 87 RSQ~~Nr~~A~~~L~~kL~e~~~~ 110 (115)
T 2rsm_A 87 RSVDQNRKIARKVLQEKVDVFYNS 110 (115)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988654
No 9
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=100.00 E-value=1e-34 Score=295.03 Aligned_cols=239 Identities=30% Similarity=0.481 Sum_probs=208.0
Q ss_pred hhhhhhHhhhccCcceeeech--hhhchHHHHHHHHHHHHHHhcCCCceeecCcccccCeeeeecCCccccchhHHHHHH
Q psy2395 311 ETNILLKYVTRLSDVELIINN--EKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVD 388 (570)
Q Consensus 311 ~~~~LL~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~r~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~ 388 (570)
...+|+++++++++..++.+. +.+++. +.+.+++.+|..+.|++|++|..+||+..|.+++++|+|+|+++.+++
T Consensus 37 ~a~~ll~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~r~~~~p~~yi~g~~~f~~~~~~v~~~~lipr~~te~lv~ 113 (284)
T 1nv8_A 37 EVLLIVSRVLGIRKEDLFLKDLGVSPTEE---KRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVE 113 (284)
T ss_dssp HHHHHHHHHHTCCGGGGCCSSCCCCHHHH---HHHHHHHHHHHTTCCHHHHHTEEEETTEEEECCTTSCCCCTTHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHhccccccccCH---HHHHHHHHHHHCCCCCeEEeeeeEECCeEEEeCCCceecChhHHHHHH
Confidence 457899999999999999988 777766 789999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC
Q psy2395 389 LIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY 467 (570)
Q Consensus 389 ~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~ 467 (570)
.++.... .++.+|||+|||+|++++.++.. + +++|+|+|+|+.+++.|++|+..++ ...+++|+++|+++.++
T Consensus 114 ~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~--l~~~v~~~~~D~~~~~~-- 187 (284)
T 1nv8_A 114 LALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHG--VSDRFFVRKGEFLEPFK-- 187 (284)
T ss_dssp HHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTT--CTTSEEEEESSTTGGGG--
T ss_pred HHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcchhhcc--
Confidence 9887643 35579999999999999999988 5 6899999999999999999998753 23359999999987554
Q ss_pred CCce---eEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHH
Q psy2395 468 KKLF---NIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL 544 (570)
Q Consensus 468 ~~~f---D~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll 544 (570)
++| |+|++||||++... .....+. |+|..|++++.+|+.+++.++. +.|+|||+++++++..+.+.+.+++
T Consensus 188 -~~f~~~D~IvsnPPyi~~~~-~l~~~v~-~ep~~al~~~~dgl~~~~~i~~---~~l~pgG~l~~e~~~~q~~~v~~~~ 261 (284)
T 1nv8_A 188 -EKFASIEMILSNPPYVKSSA-HLPKDVL-FEPPEALFGGEDGLDFYREFFG---RYDTSGKIVLMEIGEDQVEELKKIV 261 (284)
T ss_dssp -GGTTTCCEEEECCCCBCGGG-SCTTSCC-CSCHHHHBCTTTSCHHHHHHHH---HCCCTTCEEEEECCTTCHHHHTTTS
T ss_pred -cccCCCCEEEEcCCCCCccc-ccChhhc-cCcHHHhcCCCcHHHHHHHHHH---hcCCCCCEEEEEECchHHHHHHHHH
Confidence 478 99999999998776 4444444 9999999999999976666651 4889999999999999999999888
Q ss_pred HHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 545 FKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 545 ~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
.+. .+++|++|.+|+++++.
T Consensus 262 ~~~-----~~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 262 SDT-----VFLKDSAGKYRFLLLNR 281 (284)
T ss_dssp TTC-----EEEECTTSSEEEEEEEC
T ss_pred HhC-----CeecccCCCceEEEEEE
Confidence 765 78999999999999864
No 10
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.94 E-value=4.6e-27 Score=226.52 Aligned_cols=195 Identities=29% Similarity=0.463 Sum_probs=138.2
Q ss_pred eeecCCccccchhHHHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy2395 370 LNITSDVLIPRPETELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT 447 (570)
Q Consensus 370 ~~v~~~~~~pr~~t~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~ 447 (570)
|.+++++|+|+++++.++++++..+. .++.+|||+|||+|.++..+++.++ +.+|+|+|+|+.+++.|++|+..+
T Consensus 1 f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-- 77 (215)
T 4dzr_A 1 FEVGPDCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERF-- 77 (215)
T ss_dssp CBCSGGGGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC----------------
T ss_pred CcCCCCccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHh--
Confidence 56789999999999999999988754 4678999999999999999999875 579999999999999999999864
Q ss_pred cCCCCEEEEEccccccccc---CCCceeEEEECCCCCCCCCcccCCC-CccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 448 KYNIPIKFIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKG-DLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 448 ~~~~~v~~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~-~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
+.+++++++|+.+.++. ..++||+|++||||+.......... ...|+|..++.++.++++.+..+++.+.++|+
T Consensus 78 --~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 155 (215)
T 4dzr_A 78 --GAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA 155 (215)
T ss_dssp -------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBC
T ss_pred --CCceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc
Confidence 23789999999774432 1278999999999998776654444 44689999999999999999999999999999
Q ss_pred cCeE-EEEEEcCCCHHHHHHHHH--HCCCeeEEEEecCCCCceEEEEEe
Q psy2395 524 KNGL-LLIEHGYNQSNLVRKLLF--KYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 524 pgG~-l~~~~~~~~~~~l~~ll~--~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
|||+ ++++++..+.+.+.+++. +.||..+.+++|+.|..|++++++
T Consensus 156 pgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~ 204 (215)
T 4dzr_A 156 RGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 204 (215)
T ss_dssp SSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEE
Confidence 9999 888889999999999999 999999999999999999999986
No 11
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=99.91 E-value=1.1e-24 Score=186.18 Aligned_cols=70 Identities=29% Similarity=0.446 Sum_probs=66.5
Q ss_pred cccccCCCCeEEEEeeccCCCCcccccccceEEEE-ecCCc------------------------eEEEEeccccHHHHH
Q psy2395 213 EDININPADLRIDTYRASGAGGQHINKTDSAVRIT-HIPTG------------------------IVVQCQNDRSQHKNK 267 (570)
Q Consensus 213 ~~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~~-h~p~g------------------------i~~~~~~~rsq~~n~ 267 (570)
.++.|+++||+++|+|||||||||||||+|||+|+ |+|+| |+|+||++|||++||
T Consensus 13 ~~i~I~~~dl~~~~~RssGpGGQnVNKv~SaV~Lrf~i~t~~~Lp~~~k~rl~~~~~~ri~~~G~ivv~~q~~RSQ~~Nr 92 (112)
T 1j26_A 13 ASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNL 92 (112)
T ss_dssp SCCCCCTTTSEEEEECCCCSSSSCCSSCCCEEEEEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEEEECCCSSHHHHH
T ss_pred eEEecChHHeEEEEEECCCCCCCCccCCcceEEEEEeccccccCCHHHHHHHHHhhccccccCCeEEEEECCccCHHHHH
Confidence 34889999999999999999999999999999998 99997 999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy2395 268 AFALKILLARIKDSK 282 (570)
Q Consensus 268 ~~a~~~l~~~l~~~~ 282 (570)
+.|+++|+++|+++.
T Consensus 93 ~~Al~rL~~~l~~a~ 107 (112)
T 1j26_A 93 AECLQKIRDMIAEAS 107 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999764
No 12
>2jva_A Peptidyl-tRNA hydrolase domain protein; GFT hydrolase, structural genomics, PSI-2, protein STRU initiative; NMR {Pseudomonas syringae PV}
Probab=99.91 E-value=7.4e-25 Score=186.12 Aligned_cols=69 Identities=36% Similarity=0.594 Sum_probs=66.1
Q ss_pred ccccCCCCeEEEEeeccCCCCcccccccceEEEEe------cC-----------------Cc-eEEEEeccccHHHHHHH
Q psy2395 214 DININPADLRIDTYRASGAGGQHINKTDSAVRITH------IP-----------------TG-IVVQCQNDRSQHKNKAF 269 (570)
Q Consensus 214 ~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~~h------~p-----------------~g-i~~~~~~~rsq~~n~~~ 269 (570)
.+.|+++||+++|+|||||||||||||+|||+|+| +| || |+|+||++|||++||+.
T Consensus 7 ~i~I~~~dl~~~~~RssGpGGQnVNKv~SaV~L~~d~~~s~lP~~~k~rl~~~~~~ri~~~G~ivv~~q~~RSQ~~Nr~~ 86 (108)
T 2jva_A 7 NVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRAD 86 (108)
T ss_dssp SCEECGGGEEEEECCCTTCSSSSSCCCCCCEEEEEETTTSCCCHHHHHHHHTCSCTTBCTTCEEEEEECCSSSHHHHHHH
T ss_pred ccccChHHEEEEEEECCCCCCCCcCCCcceEEEEEEcccccCCHHHHHHHHHHhccccccCCcEEEEECCcCCHHHHHHH
Confidence 37899999999999999999999999999999999 99 88 99999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy2395 270 ALKILLARIKDSK 282 (570)
Q Consensus 270 a~~~l~~~l~~~~ 282 (570)
|+++|+++|+++.
T Consensus 87 Al~rL~~~l~~a~ 99 (108)
T 2jva_A 87 ALLRLSELIVNAA 99 (108)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999764
No 13
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.88 E-value=1.1e-21 Score=191.96 Aligned_cols=184 Identities=20% Similarity=0.256 Sum_probs=137.3
Q ss_pred ccccCeeeeecCCccccchhHHHHHHHHHhhcCCCCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHH
Q psy2395 363 KEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKKN 441 (570)
Q Consensus 363 ~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n 441 (570)
..||+..|.+++++++|+++++.++ +....+++.+|||+||| +|.+++.+++.. +.+|+|+|+|+.+++.|++|
T Consensus 24 ~~~~~~~~~~~~~~~~p~~~~~~l~---~~~~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~ 98 (230)
T 3evz_A 24 KALFGLDIEYHPKGLVTTPISRYIF---LKTFLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRN 98 (230)
T ss_dssp HHHHCCCCCCCTTSCCCCHHHHHHH---HHTTCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHH
T ss_pred HHhcCCceecCCCeEeCCCchhhhH---hHhhcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHH
Confidence 3577888889999999999998773 22234577899999999 999999999875 47999999999999999999
Q ss_pred HHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhc
Q psy2395 442 AKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKY 521 (570)
Q Consensus 442 ~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~ 521 (570)
+..+ +.+++++++|+.......+++||+|++||||+..... ..++|..++.++..+.+.+..+++.+.++
T Consensus 99 ~~~~----~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 168 (230)
T 3evz_A 99 IERN----NSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLG------RVLTEREAIGGGKYGEEFSVKLLEEAFDH 168 (230)
T ss_dssp HHHT----TCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------------CCSSSCHHHHHHHHHHGGG
T ss_pred HHHh----CCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccc------cccChhhhhccCccchHHHHHHHHHHHHH
Confidence 9874 3379999999743222224789999999999876542 12567778888888999999999999999
Q ss_pred cccCeEEEEEEcCC--CHHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 522 LVKNGLLLIEHGYN--QSNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 522 LkpgG~l~~~~~~~--~~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
|+|||++++.++.. ....+.+.+.+.||....+ .-..|..
T Consensus 169 LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~g~~ 210 (230)
T 3evz_A 169 LNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDI-KFKVGTR 210 (230)
T ss_dssp EEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEE-EECCCC-
T ss_pred hCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEE-EecCCCe
Confidence 99999999977653 5678889999999966544 3334433
No 14
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.88 E-value=1.1e-21 Score=195.07 Aligned_cols=203 Identities=18% Similarity=0.187 Sum_probs=144.0
Q ss_pred cccCeeeeecCCccccc----hhHHHHHHHHHhhcCC---CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHH
Q psy2395 364 EFYGLVLNITSDVLIPR----PETELLVDLIVKKTFE---KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALK 436 (570)
Q Consensus 364 ~f~~~~~~v~~~~~~pr----~~t~~l~~~~~~~~~~---~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~ 436 (570)
.|++..|.+++++|+|+ ++++.++..++..... ++.+|||+|||+|.+++.++...+ +.+|+|+|+|+.|++
T Consensus 25 ~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~ 103 (254)
T 2h00_A 25 EDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFN 103 (254)
T ss_dssp HHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHH
T ss_pred HcCCeeeecCccccCCCccchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHH
Confidence 56788888999999998 7777777777654332 467999999999999999988764 479999999999999
Q ss_pred HHHHHHHhhcccCCCCEEEEEccccc----ccccC-CCceeEEEECCCCCCCC-CcccC--CCCccccccccccccC---
Q psy2395 437 IAKKNAKKKLTKYNIPIKFIKSNWYN----NLQNY-KKLFNIIVANPPYIPKG-DIHLN--KGDLRFEPINALTDYS--- 505 (570)
Q Consensus 437 ~A~~n~~~~~~~~~~~v~~~~~D~~~----~l~~~-~~~fD~Iv~NPPy~~~~-~~~~~--~~~~~~ep~~al~~~~--- 505 (570)
.|++|+..++ ...+++++++|+.+ .++.. +++||+|++||||+... +.... ..+..++|..++++..
T Consensus 104 ~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 181 (254)
T 2h00_A 104 YAKKNVEQNN--LSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEI 181 (254)
T ss_dssp HHHHHHHHTT--CTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTT
T ss_pred HHHHHHHHcC--CCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHH
Confidence 9999998753 23359999999754 22211 15899999999998654 21111 2233467777776543
Q ss_pred ----CChHHHHHHHHHHhhccccCeEEEEEEcCCCH-HHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 506 ----NGLSSIKEIVKNASKYLVKNGLLLIEHGYNQS-NLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 506 ----~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
+++.++..++..+.++|+++|++++.++.... ..+.++++++||..+++.....|.....+.-|
T Consensus 182 LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g~~~~~~~~w 250 (254)
T 2h00_A 182 MAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAW 250 (254)
T ss_dssp HHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEE
T ss_pred EecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEecCCceEEEEEe
Confidence 56778888888888999999999988887655 88899999999999988877777654444334
No 15
>4dh9_Y YAEJ; ribosome, YAEJ, ribosome stalling, ribosome rescue, rescue F alternative rescue factor, ARFB, release factor, rescue of ribosomes; 3.20A {Escherichia coli} PDB: 2jy9_A
Probab=99.87 E-value=7.4e-23 Score=182.14 Aligned_cols=70 Identities=43% Similarity=0.655 Sum_probs=66.1
Q ss_pred ccccCCCCeEEEEeeccCCCCcccccccceEEEE------ecCC-----------------c-eEEEEeccccHHHHHHH
Q psy2395 214 DININPADLRIDTYRASGAGGQHINKTDSAVRIT------HIPT-----------------G-IVVQCQNDRSQHKNKAF 269 (570)
Q Consensus 214 ~~~i~~~~~~~~~~r~~g~ggq~vnk~~s~v~~~------h~p~-----------------g-i~~~~~~~rsq~~n~~~ 269 (570)
++.|+++||+++|+|||||||||||||+|+|+|+ |+|+ | |+|+||++|||++||+.
T Consensus 7 ~i~I~~~el~~~~~RssGpGGQnVNKv~SaV~L~~~~~~s~lp~~~k~rL~~~~~~rit~~G~ivv~~q~~RSQ~~Nr~~ 86 (140)
T 4dh9_Y 7 HVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREA 86 (140)
T ss_dssp SSCCCTTCSEEEEECCCSSSSHHHHTTCCCEEEEECCSSSSSCSHHHHHHHSCCCTTSCSSCCCCEEECCCSSHHHHHHH
T ss_pred CCccChHHeEEEEEECCCCCCCccccccceEEEEEecccccCCHHHHHHHHHHhccccccCCcEEEEEcCCcCHHHHHHH
Confidence 3889999999999999999999999999999999 7997 4 99999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy2395 270 ALKILLARIKDSKL 283 (570)
Q Consensus 270 a~~~l~~~l~~~~~ 283 (570)
|+++|.++|+++..
T Consensus 87 A~~rL~~~l~~a~~ 100 (140)
T 4dh9_Y 87 ALARLVAMIKELTT 100 (140)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999997753
No 16
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.83 E-value=1.5e-19 Score=169.03 Aligned_cols=158 Identities=21% Similarity=0.232 Sum_probs=126.7
Q ss_pred CccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEE
Q psy2395 375 DVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIK 454 (570)
Q Consensus 375 ~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~ 454 (570)
.+|+|+|+++.+++.+.. ...++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .+++
T Consensus 2 ~v~~P~~~~~~l~~~l~~-~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~-----~-------~~~~ 64 (170)
T 3q87_B 2 DWYEPGEDTYTLMDALER-EGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES-----H-------RGGN 64 (170)
T ss_dssp CSCCCCHHHHHHHHHHHH-HTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT-----C-------SSSC
T ss_pred cccCcCccHHHHHHHHHh-hcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc-----c-------cCCe
Confidence 478999999999998533 22356799999999999999998643 89999999999987 1 1378
Q ss_pred EEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-c
Q psy2395 455 FIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-G 533 (570)
Q Consensus 455 ~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~ 533 (570)
++++|+.+..+. ++||+|++||||++..+.. .+.++.++...+..+++ .| |||++++.. +
T Consensus 65 ~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~~------------~~~~~~~~~~~~~~~~~----~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 65 LVRADLLCSINQ--ESVDVVVFNPPYVPDTDDP------------IIGGGYLGREVIDRFVD----AV-TVGMLYLLVIE 125 (170)
T ss_dssp EEECSTTTTBCG--GGCSEEEECCCCBTTCCCT------------TTBCCGGGCHHHHHHHH----HC-CSSEEEEEEEG
T ss_pred EEECChhhhccc--CCCCEEEECCCCccCCccc------------cccCCcchHHHHHHHHh----hC-CCCEEEEEEec
Confidence 999999875443 7899999999998754321 14455566666665555 45 999998855 5
Q ss_pred CCCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEE
Q psy2395 534 YNQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGK 568 (570)
Q Consensus 534 ~~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~ 568 (570)
..+.+.+.+++++.||..+.+..+..+.+|++..+
T Consensus 126 ~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 126 ANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp GGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred CCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 67889999999999999999999999999998875
No 17
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.79 E-value=6.5e-18 Score=181.25 Aligned_cols=198 Identities=14% Similarity=0.187 Sum_probs=154.6
Q ss_pred ccCcceeeechhhhchHHHHHHHHHHHHHHh-------cCCCceeecCccccc---CeeeeecCCcccc--chhHHHHHH
Q psy2395 321 RLSDVELIINNEKKLHKQEINILNKLIQRRI-------LGEPIAYIIGKKEFY---GLVLNITSDVLIP--RPETELLVD 388 (570)
Q Consensus 321 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~r~-------~~~p~~~i~g~~~f~---~~~~~v~~~~~~p--r~~t~~l~~ 388 (570)
+.+...+++....+++..+.+.+..+..++. .+.|++|+.|...|+ +..|.++|+.|+| ++.++.+++
T Consensus 197 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~g~~~~~~~~~f~q~n~~~~e~l~~ 276 (433)
T 1uwv_A 197 ATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA 276 (433)
T ss_dssp ETTEEEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEESSSSCCEEEECCCCEEEETTEEEECCSSSCCCSBHHHHHHHHH
T ss_pred eCCCcEEEEEecCCCCHHHHHHHHHHhhcccEEEEEECCCCeEEEEeCCCcEEEECCEEEEECcccccccCHHHHHHHHH
Confidence 3455667776677788777888888887764 567889999999888 9999999999999 468999999
Q ss_pred HHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc--
Q psy2395 389 LIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ-- 465 (570)
Q Consensus 389 ~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~-- 465 (570)
.++..+. .++.+|||+|||+|.+++.++.. ..+|+|+|+|+.+++.|++|+..++. .+++|+++|+.+.+.
T Consensus 277 ~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 277 RALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLEEDVTKQ 350 (433)
T ss_dssp HHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTTSCCSSS
T ss_pred HHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHHHHhhhh
Confidence 8887653 45679999999999999999965 36999999999999999999987532 269999999977543
Q ss_pred -cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHH
Q psy2395 466 -NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL 544 (570)
Q Consensus 466 -~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll 544 (570)
...++||+|++||||... ..+++.+. .++|++++++.+.+.....-...|
T Consensus 351 ~~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~l~-~~~p~~ivyvsc~p~tlard~~~l 401 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAGA----------------------------AGVMQQII-KLEPIRIVYVSCNPATLARDSEAL 401 (433)
T ss_dssp GGGTTCCSEEEECCCTTCC----------------------------HHHHHHHH-HHCCSEEEEEESCHHHHHHHHHHH
T ss_pred hhhcCCCCEEEECCCCccH----------------------------HHHHHHHH-hcCCCeEEEEECChHHHHhhHHHH
Confidence 223689999999998632 12333332 378999988877655555555667
Q ss_pred HHCCCeeEE
Q psy2395 545 FKYGFSDIK 553 (570)
Q Consensus 545 ~~~Gf~~i~ 553 (570)
.+.||....
T Consensus 402 ~~~Gy~~~~ 410 (433)
T 1uwv_A 402 LKAGYTIAR 410 (433)
T ss_dssp HHTTCEEEE
T ss_pred HHCCcEEEE
Confidence 778998766
No 18
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.79 E-value=3.6e-18 Score=170.47 Aligned_cols=178 Identities=17% Similarity=0.250 Sum_probs=127.9
Q ss_pred cCeeeeecCCccccchhHHHHHHHHHhhcCC-CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 366 YGLVLNITSDVLIPRPETELLVDLIVKKTFE-KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~~-~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
.++.+..++..|.+..++..+..++ ... ++.+|||+|||+|.+++.++..++ .+|+|+|+++.+++.|++|+..
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~---~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~ 94 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFS---YLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAY 94 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHC---CCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHh---cCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHH
Confidence 4667777888887776666555543 234 578999999999999999998763 4999999999999999999987
Q ss_pred hcccCCCCEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 445 KLTKYNIPIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 445 ~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
++ ...+++++++|+.+..... .++||+|++||||+.......... .+..+.. .......+..+++.+.++|+
T Consensus 95 ~~--~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~----~~~~~~a-~~~~~~~~~~~l~~~~~~Lk 167 (259)
T 3lpm_A 95 NQ--LEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNT----NEHFRIA-RHEVMCTLEDTIRVAASLLK 167 (259)
T ss_dssp TT--CTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC----------------------------HHHHHHHHHHHHHEE
T ss_pred CC--CcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCC----chHHHhh-hccccCCHHHHHHHHHHHcc
Confidence 53 3346999999997754322 478999999999986522111110 0111111 11223456789999999999
Q ss_pred cCeEEEEEEcCCCHHHHHHHHHHCCCeeEEEE
Q psy2395 524 KNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 524 pgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
|||++++.++......+...+.+.||....+.
T Consensus 168 pgG~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 168 QGGKANFVHRPERLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp EEEEEEEEECTTTHHHHHHHHHHTTEEEEEEE
T ss_pred CCcEEEEEEcHHHHHHHHHHHHHCCCceEEEE
Confidence 99999999999999999999999999875543
No 19
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.74 E-value=2.1e-17 Score=158.57 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=134.9
Q ss_pred hhhhchHHHHHHHHHHHHHHhcCCCceeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcC----CCCCEEEEECC
Q psy2395 331 NEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTF----EKKIKLLEMGT 406 (570)
Q Consensus 331 ~~~~l~~~~~~~~~~~~~~r~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~----~~~~~VLDlGc 406 (570)
...+++.++.+.+..++.++.. +..+++..+ .+++++.+++.++..+. .++.+|||+||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiG~ 74 (207)
T 1jsx_A 12 AGISLTDHQKNQLIAYVNMLHK---------WNKAYNLTS--------VRDPNEMLVRHILDSIVVAPYLQGERFIDVGT 74 (207)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHH---------HC--------------------CHHHHHHHHHHHHGGGCCSSEEEEETC
T ss_pred cCCCCCHHHHHHHHHHHHHHHH---------hcccccccc--------cCCHHHHHHHHHHhhhhhhhhcCCCeEEEECC
Confidence 3456778888888888877765 112222221 15566666665554322 13679999999
Q ss_pred cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCc
Q psy2395 407 GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDI 486 (570)
Q Consensus 407 GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~ 486 (570)
|+|.++..++...+ +.+|+|+|+|+.+++.|++|+..++ -.+++++++|+.+..+ .++||+|++|..
T Consensus 75 G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~--~~~~D~i~~~~~------- 141 (207)
T 1jsx_A 75 GPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRVEEFPS--EPPFDGVISRAF------- 141 (207)
T ss_dssp TTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCTTTSCC--CSCEEEEECSCS-------
T ss_pred CCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecchhhCCc--cCCcCEEEEecc-------
Confidence 99999999998865 5899999999999999999998742 1249999999976442 368999999631
Q ss_pred ccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEE----EEecCCCCc
Q psy2395 487 HLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIK----SWRDLSGIE 562 (570)
Q Consensus 487 ~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~----~~~D~~g~~ 562 (570)
..+..++..+.++|+|||++++..+..+.+.+.+++. ||..+. .+++..+..
T Consensus 142 ----------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~ 197 (207)
T 1jsx_A 142 ----------------------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGER 197 (207)
T ss_dssp ----------------------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEE
T ss_pred ----------------------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCce
Confidence 1246889999999999999999999989888888776 998877 667888999
Q ss_pred eEEEEEe
Q psy2395 563 RVTQGKI 569 (570)
Q Consensus 563 R~~~~~~ 569 (570)
++++.++
T Consensus 198 ~~~~~~k 204 (207)
T 1jsx_A 198 HLVVIKA 204 (207)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9888775
No 20
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=2.2e-17 Score=165.10 Aligned_cols=155 Identities=17% Similarity=0.229 Sum_probs=110.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh---hcccCCCCEEEEEcccccccc------c
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK---KLTKYNIPIKFIKSNWYNNLQ------N 466 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~---~~~~~~~~v~~~~~D~~~~l~------~ 466 (570)
.++.+|||+|||+|.+++.++...+ ..+|+|+|+++.+++.|++|+.. ++ ...+++++++|+.+..+ .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCHHHHhhhhhhhcc
Confidence 3567999999999999999999875 58999999999999999999876 42 23369999999977532 2
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHH
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFK 546 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~ 546 (570)
..++||+|++||||+.... ...+... ...++.... ..+..+++.+.++|+|||+++++++......+.+.+.+
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~-~~~~~~~---~~~a~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~ 184 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGD-RRTPDAL---KAEAHAMTE---GLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGS 184 (260)
T ss_dssp CTTCEEEEEECCCC----------------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTT
T ss_pred CCCCcCEEEECCCCcCCCC-CCCcCHH---HHHHhhcCc---CCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHh
Confidence 2468999999999987531 1111111 012222222 23578999999999999999999998888888888887
Q ss_pred CCCeeEEEEecCCCC
Q psy2395 547 YGFSDIKSWRDLSGI 561 (570)
Q Consensus 547 ~Gf~~i~~~~D~~g~ 561 (570)
. |..+.+.......
T Consensus 185 ~-~~~~~i~~v~~~~ 198 (260)
T 2ozv_A 185 R-FGGLEITLIHPRP 198 (260)
T ss_dssp T-EEEEEEEEEESST
T ss_pred c-CCceEEEEEcCCC
Confidence 5 8777766655443
No 21
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=4.7e-17 Score=154.26 Aligned_cols=140 Identities=11% Similarity=0.171 Sum_probs=107.5
Q ss_pred cccCeeeeecCCccccchhHHHHHHHHHhhc----CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 364 EFYGLVLNITSDVLIPRPETELLVDLIVKKT----FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 364 ~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~----~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.|.+..+.+.+ ..++|.+..+.+.+...+ ..++.+|||+|||+|.+++.++... ..+|+|+|+|+.+++.|+
T Consensus 9 ~~~g~~l~~~~--~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~ 84 (189)
T 3p9n_A 9 VAGGRRIAVPP--RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIA 84 (189)
T ss_dssp TTTTCEEECCS--CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHH
T ss_pred ccCCcEecCCC--CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHH
Confidence 56788888777 566776666666555443 2467899999999999999887754 468999999999999999
Q ss_pred HHHHhhcccCCCCEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHH
Q psy2395 440 KNAKKKLTKYNIPIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNA 518 (570)
Q Consensus 440 ~n~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~ 518 (570)
+|+..++. .+++++++|+.+..... .++||+|++||||... ...+..++..+
T Consensus 85 ~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~------------------------~~~~~~~l~~~ 137 (189)
T 3p9n_A 85 RNIEALGL---SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVD------------------------SADVDAILAAL 137 (189)
T ss_dssp HHHHHHTC---SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSC------------------------HHHHHHHHHHH
T ss_pred HHHHHcCC---CceEEEEccHHHHHhhccCCCccEEEECCCCCcc------------------------hhhHHHHHHHH
Confidence 99987532 46999999997754322 4789999999998732 13457888888
Q ss_pred hh--ccccCeEEEEEEcC
Q psy2395 519 SK--YLVKNGLLLIEHGY 534 (570)
Q Consensus 519 ~~--~LkpgG~l~~~~~~ 534 (570)
.+ +|+|||.++++...
T Consensus 138 ~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 138 GTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHSSSCCTTCEEEEEEET
T ss_pred HhcCccCCCeEEEEEecC
Confidence 88 99999999998754
No 22
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.72 E-value=3.2e-17 Score=162.88 Aligned_cols=174 Identities=13% Similarity=0.112 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCceeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHH
Q psy2395 336 HKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAI 415 (570)
Q Consensus 336 ~~~~~~~~~~~~~~r~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~l 415 (570)
..+++..+..++.++..+.|++|+++..+||...|..+..++.|.+ ..++.+|||+|||+|.+++.+
T Consensus 32 ~~~~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~-------------~~~~~~vLDiG~G~G~~~i~l 98 (249)
T 3g89_A 32 HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPL-------------WQGPLRVLDLGTGAGFPGLPL 98 (249)
T ss_dssp GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSC-------------CCSSCEEEEETCTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccc-------------cCCCCEEEEEcCCCCHHHHHH
Confidence 3566788888899999999999999999998877766555554432 235779999999999999999
Q ss_pred HHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc--cCCCceeEEEECCCCCCCCCcccCCCCc
Q psy2395 416 AIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--NYKKLFNIIVANPPYIPKGDIHLNKGDL 493 (570)
Q Consensus 416 a~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--~~~~~fD~Iv~NPPy~~~~~~~~~~~~~ 493 (570)
+...+ +.+|+|+|+|+.+++.|++|+..++. .+++++++|+.+... ...++||+|+++--
T Consensus 99 a~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~-------------- 160 (249)
T 3g89_A 99 KIVRP-ELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAGHREAYARAVARAV-------------- 160 (249)
T ss_dssp HHHCT-TCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTTTTTCEEEEEEESS--------------
T ss_pred HHHCC-CCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccccCCCceEEEECCc--------------
Confidence 98875 68999999999999999999987532 249999999966432 12368999999420
Q ss_pred cccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHH---HHHHHHHCCCeeEEEE
Q psy2395 494 RFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNL---VRKLLFKYGFSDIKSW 555 (570)
Q Consensus 494 ~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---l~~ll~~~Gf~~i~~~ 555 (570)
..+..+++.+.++|+|||++++..+....++ +...+...||....+.
T Consensus 161 ---------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 161 ---------------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp ---------------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEE
T ss_pred ---------------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEE
Confidence 1236889999999999999998877655444 4566778899876654
No 23
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.72 E-value=3.1e-17 Score=154.32 Aligned_cols=147 Identities=21% Similarity=0.236 Sum_probs=113.3
Q ss_pred eeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHH
Q psy2395 357 AYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFA 434 (570)
Q Consensus 357 ~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~a 434 (570)
..+.| .|++..+.+.++. .++|.++.+.+.+...+. .++.+|||+|||+|.+++.++... ..+|+|+|+|+.+
T Consensus 5 ~i~~g--~~~~~~~~~~~~~-~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~ 79 (187)
T 2fhp_A 5 RVISG--EYGGRRLKALDGD-NTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAA 79 (187)
T ss_dssp BCCSS--TTTTCBCCCCCCC-SSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHH
T ss_pred EEeec--cccCccccCCCCC-CcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHH
Confidence 34445 7888999888776 788888888888877653 367799999999999999988753 4799999999999
Q ss_pred HHHHHHHHHhhcccCCCCEEEEEccccccccc---CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH
Q psy2395 435 LKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI 511 (570)
Q Consensus 435 l~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~ 511 (570)
++.|++|+..++ ...+++++++|+.+..+. ..++||+|++||||.... .
T Consensus 80 ~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~--------------------------~ 131 (187)
T 2fhp_A 80 LKVIKENIAITK--EPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQE--------------------------I 131 (187)
T ss_dssp HHHHHHHHHHHT--CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCC--------------------------H
T ss_pred HHHHHHHHHHhC--CCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchh--------------------------H
Confidence 999999998752 223699999999774431 147899999999986221 1
Q ss_pred HHHHHHH--hhccccCeEEEEEEcCCC
Q psy2395 512 KEIVKNA--SKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 512 ~~~l~~~--~~~LkpgG~l~~~~~~~~ 536 (570)
..++..+ .++|+|||++++.++...
T Consensus 132 ~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 132 VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 3333444 889999999999876543
No 24
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.72 E-value=1.9e-16 Score=149.24 Aligned_cols=171 Identities=24% Similarity=0.355 Sum_probs=128.5
Q ss_pred ceeecCcccccCeeeeecCCccccc---hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCH
Q psy2395 356 IAYIIGKKEFYGLVLNITSDVLIPR---PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISK 432 (570)
Q Consensus 356 ~~~i~g~~~f~~~~~~v~~~~~~pr---~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~ 432 (570)
..++.+...-....+...+++|.|. +.++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~ 84 (194)
T 1dus_A 11 VKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVV---VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINR 84 (194)
T ss_dssp EEEEEEEETTEEEEEEEETTSTTTTSCCHHHHHHHHHCC---CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCH
T ss_pred ccEEeeecCCCceEEEeCCCcCCccccchHHHHHHHHcc---cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCH
Confidence 3455444444455666778899888 56666665541 246779999999999999999876 36999999999
Q ss_pred HHHHHHHHHHHhhcccCCC-CEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH
Q psy2395 433 FALKIAKKNAKKKLTKYNI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI 511 (570)
Q Consensus 433 ~al~~A~~n~~~~~~~~~~-~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~ 511 (570)
.+++.|++++..++ ... +++++++|+.+..+ .++||+|++||||... ....
T Consensus 85 ~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~------------------------~~~~ 136 (194)
T 1dus_A 85 RAIKLAKENIKLNN--LDNYDIRVVHSDLYENVK--DRKYNKIITNPPIRAG------------------------KEVL 136 (194)
T ss_dssp HHHHHHHHHHHHTT--CTTSCEEEEECSTTTTCT--TSCEEEEEECCCSTTC------------------------HHHH
T ss_pred HHHHHHHHHHHHcC--CCccceEEEECchhcccc--cCCceEEEECCCcccc------------------------hhHH
Confidence 99999999998642 111 39999999977544 4689999999998631 2355
Q ss_pred HHHHHHHhhccccCeEEEEEEcCCC-HHHHHHHHHHCCCeeEEEEecCCCC
Q psy2395 512 KEIVKNASKYLVKNGLLLIEHGYNQ-SNLVRKLLFKYGFSDIKSWRDLSGI 561 (570)
Q Consensus 512 ~~~l~~~~~~LkpgG~l~~~~~~~~-~~~l~~ll~~~Gf~~i~~~~D~~g~ 561 (570)
..+++.+.++|+|||.+++..+..+ ...+.+.+.+. |..++++.+..+.
T Consensus 137 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 186 (194)
T 1dus_A 137 HRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV-FGNVETVTIKGGY 186 (194)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH-HSCCEEEEEETTE
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH-hcceEEEecCCcE
Confidence 7899999999999999999876654 44477888776 6667777666554
No 25
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.71 E-value=1.9e-17 Score=167.54 Aligned_cols=193 Identities=11% Similarity=0.131 Sum_probs=121.4
Q ss_pred eeeechhhhchHHHHHHHHHHHHHH---hcCCCceeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcC-CCCCEE
Q psy2395 326 ELIINNEKKLHKQEINILNKLIQRR---ILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTF-EKKIKL 401 (570)
Q Consensus 326 ~~~~~~~~~l~~~~~~~~~~~~~~r---~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~-~~~~~V 401 (570)
.++.+++.+++.++...+..++.++ ..++|++|++|...||+..+. +.++.+++++..... .++.+|
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~g~~~~~g~~~~---------~~~~~l~~~l~~~~~~~~~~~v 83 (281)
T 3bzb_A 13 GLPGTPPDFYRERQRSRVERYQSPAGAPLQCSVQVQTTQEHPLWTSHVW---------SGARALADTLCWQPELIAGKTV 83 (281)
T ss_dssp ----------------CEEEEECCSSCC-CCEEEEECC--------------------CHHHHHHHHHHHCGGGTTTCEE
T ss_pred cHhhCCCccCChHHHHHHHHHHhhccccccCCeEEEECCCCCCCCceee---------cHHHHHHHHHHhcchhcCCCeE
Confidence 4666777778888777777777777 677899999999999987765 678888888876532 356799
Q ss_pred EEECCcccHHHHHHHHhcCCCcEEEEEeC-CHHHHHHHHHHHHhhcc---cCC----CCEEEEEcccccc---ccc--CC
Q psy2395 402 LEMGTGSGAIAIAIAIYSKNKIEIIATDI-SKFALKIAKKNAKKKLT---KYN----IPIKFIKSNWYNN---LQN--YK 468 (570)
Q Consensus 402 LDlGcGtG~i~l~la~~~~~~~~V~gvDi-s~~al~~A~~n~~~~~~---~~~----~~v~~~~~D~~~~---l~~--~~ 468 (570)
||+|||+|.+++.+++.+ ..+|+|+|+ |+.+++.|++|+..|.. ... .++++...|+.+. +.. ..
T Consensus 84 LDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 161 (281)
T 3bzb_A 84 CELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGL 161 (281)
T ss_dssp EETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSC
T ss_pred EEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccC
Confidence 999999999999998764 359999999 89999999999943210 011 2578886665432 211 24
Q ss_pred CceeEEEE-CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc---c--CeEEEEEEcCCC------
Q psy2395 469 KLFNIIVA-NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV---K--NGLLLIEHGYNQ------ 536 (570)
Q Consensus 469 ~~fD~Iv~-NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk---p--gG~l~~~~~~~~------ 536 (570)
++||+|++ +++|+. ..+..+++.+.++|+ | ||.+++.+....
T Consensus 162 ~~fD~Ii~~dvl~~~--------------------------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~ 215 (281)
T 3bzb_A 162 QRFQVVLLADLLSFH--------------------------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER 215 (281)
T ss_dssp SSBSEEEEESCCSCG--------------------------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------
T ss_pred CCCCEEEEeCcccCh--------------------------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh
Confidence 68999997 666642 135788899999999 9 999877654422
Q ss_pred HHHHHHHHHHCC-CeeEEEE
Q psy2395 537 SNLVRKLLFKYG-FSDIKSW 555 (570)
Q Consensus 537 ~~~l~~ll~~~G-f~~i~~~ 555 (570)
...+.+.+.+.| |....+.
T Consensus 216 ~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 216 DLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp CTHHHHHHHHSTTEEEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEec
Confidence 345667888999 9887664
No 26
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=2.5e-16 Score=152.29 Aligned_cols=164 Identities=17% Similarity=0.122 Sum_probs=120.8
Q ss_pred cCCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCC
Q psy2395 373 TSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIP 452 (570)
Q Consensus 373 ~~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~ 452 (570)
.+.+++|+|++. ..++. .....++.+|||+|||+|.+++.+++..+ +.+|+|+|+|+.+++.|++|+..++. .+
T Consensus 19 ~~~~~~~~p~~~-~~~~~-~~f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~ 92 (214)
T 1yzh_A 19 NPQYVVLNPLEA-KAKWR-DLFGNDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV---PN 92 (214)
T ss_dssp CTTTEECCGGGT-TTTHH-HHHTSCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC---SS
T ss_pred CCCEEecChhhc-ccCHH-HHcCCCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC---CC
Confidence 455677777642 22222 22234577999999999999999999876 68999999999999999999987531 46
Q ss_pred EEEEEcccccccc-cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 453 IKFIKSNWYNNLQ-NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 453 v~~~~~D~~~~l~-~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+.++++|+.+... ...++||+|++|+|-... ..+|+++. ..+..+++.+.++|+|||.+++.
T Consensus 93 v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~--------~~~~~~~~---------~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 93 IKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWP--------KKRHEKRR---------LTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp EEEEECCSSCGGGTSCTTCCSEEEEESCCCCC--------SGGGGGGS---------TTSHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEeCCHHHHHhhcCCCCCCEEEEECCCCcc--------ccchhhhc---------cCCHHHHHHHHHHcCCCcEEEEE
Confidence 9999999976321 224689999999763211 11222221 12468899999999999999998
Q ss_pred EcC-CCHHHHHHHHHHCCCeeEEEEecCC
Q psy2395 532 HGY-NQSNLVRKLLFKYGFSDIKSWRDLS 559 (570)
Q Consensus 532 ~~~-~~~~~l~~ll~~~Gf~~i~~~~D~~ 559 (570)
+.. .....+.+.+.+.||..+.+..|+.
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~~~~d~~ 184 (214)
T 1yzh_A 156 TDNRGLFEYSLVSFSQYGMKLNGVWLDLH 184 (214)
T ss_dssp ESCHHHHHHHHHHHHHHTCEEEEEESSGG
T ss_pred eCCHHHHHHHHHHHHHCCCeeeecccccc
Confidence 855 4466778889999999998888764
No 27
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.70 E-value=1.1e-16 Score=166.42 Aligned_cols=201 Identities=17% Similarity=0.187 Sum_probs=138.3
Q ss_pred hchHHHHHHHHHHHHHHhcCCCceeecCcccccCeeeeecCCccccchhHHHHHHHHHhhc-CCCCCEEEEECCcccHHH
Q psy2395 334 KLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKT-FEKKIKLLEMGTGSGAIA 412 (570)
Q Consensus 334 ~l~~~~~~~~~~~~~~r~~~~p~~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~ 412 (570)
.++.+.+..+.+.+.++..+.|.++ ..+|+|+.....+...+.... ..++.+|||+|||||.++
T Consensus 81 ~~~~~~~g~~ye~~~~~~~~~~~~~---------------g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l 145 (344)
T 2f8l_A 81 NFSNEEIRKGLQLALLKGMKHGIQV---------------NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLL 145 (344)
T ss_dssp GSCHHHHHHHHHHHHHHHTSSSCCG---------------GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHH
T ss_pred cCChhHHHHHHHHHHHHHhhccccc---------------CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHH
Confidence 4456666666666666665555544 234678777666555443221 235679999999999999
Q ss_pred HHHHHhcCCC----cEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCccc
Q psy2395 413 IAIAIYSKNK----IEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHL 488 (570)
Q Consensus 413 l~la~~~~~~----~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~ 488 (570)
+.+++..+.. .+++|+|+++.+++.|+.|+..+ +.++.++++|.+.... ..+||+|++||||.......
T Consensus 146 ~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~----g~~~~i~~~D~l~~~~--~~~fD~Ii~NPPfg~~~~~~- 218 (344)
T 2f8l_A 146 TTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ----RQKMTLLHQDGLANLL--VDPVDVVISDLPVGYYPDDE- 218 (344)
T ss_dssp HHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH----TCCCEEEESCTTSCCC--CCCEEEEEEECCCSEESCHH-
T ss_pred HHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC----CCCceEEECCCCCccc--cCCccEEEECCCCCCcCchh-
Confidence 9998876422 78999999999999999999864 3368999999877443 36899999999974321110
Q ss_pred CCCCccccccccccccCCChHH-HHHHHHHHhhccccCeEEEEEE-----cCCCHHHHHHHHHHCCCee--EEEEecCCC
Q psy2395 489 NKGDLRFEPINALTDYSNGLSS-IKEIVKNASKYLVKNGLLLIEH-----GYNQSNLVRKLLFKYGFSD--IKSWRDLSG 560 (570)
Q Consensus 489 ~~~~~~~ep~~al~~~~~gl~~-~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~l~~ll~~~Gf~~--i~~~~D~~g 560 (570)
...+|+|. ..+|... ...++..+.++|+|||++++++ ...+...+++++.+.|+.. +..-.++.+
T Consensus 219 --~~~~~~~~-----~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp~~~F~ 291 (344)
T 2f8l_A 219 --NAKTFELC-----REEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFK 291 (344)
T ss_dssp --HHTTSTTC-----CSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECCGGGSC
T ss_pred --hhhhcccc-----CCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCChhhcc
Confidence 01234432 1233333 3468999999999999999988 4466788999998888743 444556666
Q ss_pred Cce
Q psy2395 561 IER 563 (570)
Q Consensus 561 ~~R 563 (570)
..+
T Consensus 292 ~~~ 294 (344)
T 2f8l_A 292 SEQ 294 (344)
T ss_dssp C-C
T ss_pred CCC
Confidence 554
No 28
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.69 E-value=1.6e-16 Score=160.09 Aligned_cols=173 Identities=16% Similarity=0.106 Sum_probs=133.7
Q ss_pred CCceeecCcccccCeeeeecCC--ccccchhHHHHHHHHH---------------hh-cCCCCCEEEEECCcccHHHHHH
Q psy2395 354 EPIAYIIGKKEFYGLVLNITSD--VLIPRPETELLVDLIV---------------KK-TFEKKIKLLEMGTGSGAIAIAI 415 (570)
Q Consensus 354 ~p~~~i~g~~~f~~~~~~v~~~--~~~pr~~t~~l~~~~~---------------~~-~~~~~~~VLDlGcGtG~i~l~l 415 (570)
.|..++.|. +++..+.+.++ +++++|.++.+.+.+. .. ...++.+|||+|||+|.+++.+
T Consensus 53 ~~~~~i~g~--~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l 130 (277)
T 1o54_A 53 IDLNEVFEK--GPGEIIRTSAGKKGYILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVL 130 (277)
T ss_dssp EEHHHHTTS--CTTCEEECTTCCEEEEECCCHHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHH
T ss_pred EEHHHhcCC--CCCcEEEEcCCcEEEEeCCCHHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHH
Confidence 344555554 56778888777 7888988887765321 11 1245779999999999999999
Q ss_pred HHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccc
Q psy2395 416 AIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRF 495 (570)
Q Consensus 416 a~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ 495 (570)
++...+..+|+++|+|+.+++.|++|+..++ ...+++++.+|+.+.++ .++||+|++|||..
T Consensus 131 a~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~~D~V~~~~~~~-------------- 192 (277)
T 1o54_A 131 ARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDISEGFD--EKDVDALFLDVPDP-------------- 192 (277)
T ss_dssp HHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGGGCCS--CCSEEEEEECCSCG--------------
T ss_pred HHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHccc--CCccCEEEECCcCH--------------
Confidence 9883335799999999999999999998642 22369999999977643 36899999998742
Q ss_pred cccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 496 EPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 496 ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
..+++.+.+.|+|||++++..+. .+...+.+.+.+.||..++++.++.+..
T Consensus 193 ----------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~~ 244 (277)
T 1o54_A 193 ----------------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRPY 244 (277)
T ss_dssp ----------------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCCCCE
T ss_pred ----------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEeeeee
Confidence 24567788899999999998875 4677888889999999999988876653
No 29
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.69 E-value=2.2e-17 Score=179.00 Aligned_cols=179 Identities=17% Similarity=0.177 Sum_probs=110.2
Q ss_pred hhccCcceeeechhhhchHHHHHHHHHHHHHHhcCCCceeec----------CcccccCeeeeecCCccccchhHHHHHH
Q psy2395 319 VTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYII----------GKKEFYGLVLNITSDVLIPRPETELLVD 388 (570)
Q Consensus 319 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~p~~~i~----------g~~~f~~~~~~v~~~~~~pr~~t~~l~~ 388 (570)
+++.++..++++.. ++++.+.+..++.++..+.|++|++ ++.+||+..+. ++.++.|++.++.+.+
T Consensus 73 ~l~~~~~~l~l~~~---~~~~~~~~~~ll~~~~~~~pl~~i~~~r~~~~~~~~~~~~y~~~~~-~~~~L~d~~~t~~~~~ 148 (480)
T 3b3j_A 73 IITLGCNSVLIQFA---TPHDFCSFYNILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQ-QQNMMQDYVRTGTYQR 148 (480)
T ss_dssp --------------------------------------------------CCEEEEGGGCSCH-HHHHHHHHHHHHHHHH
T ss_pred hhcCChHHhhccCC---CHHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhchhhHHHHHhhhcc-chhhhcChHhHHHHHH
Confidence 35555666655542 4567778889999999999999999 77888888776 7888999999999988
Q ss_pred HHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC
Q psy2395 389 LIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY 467 (570)
Q Consensus 389 ~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~ 467 (570)
.++..+. .++.+|||+|||+|.+++.+++.+ ..+|+|+|+|+ +++.|++++..++ ...+++++.+|+.+. +.
T Consensus 149 ~il~~l~~~~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~g--l~~~v~~~~~d~~~~-~~- 221 (480)
T 3b3j_A 149 AILQNHTDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEV-SL- 221 (480)
T ss_dssp HHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTT--CTTTEEEEESCTTTC-CC-
T ss_pred HHHHhhhhcCCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcC--CCCcEEEEECchhhC-cc-
Confidence 8877543 356799999999999999998753 46999999999 9999999998753 335799999999763 21
Q ss_pred CCceeEEEECCC-CCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 468 KKLFNIIVANPP-YIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 468 ~~~fD~Iv~NPP-y~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.++||+|++|+| |+... +.+...+..+.++|+|||++++.+
T Consensus 222 ~~~fD~Ivs~~~~~~~~~------------------------e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 222 PEQVDIIISEPMGYMLFN------------------------ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp SSCEEEEECCCCHHHHTC------------------------HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCeEEEEEeCchHhcCc------------------------HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 368999999988 32110 123456668889999999998643
No 30
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.68 E-value=5.8e-16 Score=163.05 Aligned_cols=141 Identities=19% Similarity=0.311 Sum_probs=114.5
Q ss_pred CeeeeecCCccc---cchhHHHHHHHHHhhcC---CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 367 GLVLNITSDVLI---PRPETELLVDLIVKKTF---EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 367 ~~~~~v~~~~~~---pr~~t~~l~~~~~~~~~---~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++.|...+++|. +.+.++.+++.+..... .++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++
T Consensus 197 ~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~ 273 (381)
T 3dmg_A 197 EYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQK 273 (381)
T ss_dssp EEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHH
T ss_pred eEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHH
Confidence 357888999998 55888999888876532 356799999999999999999763 699999999999999999
Q ss_pred HHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhh
Q psy2395 441 NAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK 520 (570)
Q Consensus 441 n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~ 520 (570)
|+..+ +.+++++++|+.+.... .++||+|++||||+... ....+....++..+.+
T Consensus 274 n~~~~----~~~v~~~~~D~~~~~~~-~~~fD~Ii~npp~~~~~--------------------~~~~~~~~~~l~~~~~ 328 (381)
T 3dmg_A 274 GLEAN----ALKAQALHSDVDEALTE-EARFDIIVTNPPFHVGG--------------------AVILDVAQAFVNVAAA 328 (381)
T ss_dssp HHHHT----TCCCEEEECSTTTTSCT-TCCEEEEEECCCCCTTC--------------------SSCCHHHHHHHHHHHH
T ss_pred HHHHc----CCCeEEEEcchhhcccc-CCCeEEEEECCchhhcc--------------------cccHHHHHHHHHHHHH
Confidence 99874 44589999999775432 47899999999997422 1123466889999999
Q ss_pred ccccCeEEEEEEcCC
Q psy2395 521 YLVKNGLLLIEHGYN 535 (570)
Q Consensus 521 ~LkpgG~l~~~~~~~ 535 (570)
+|+|||++++++...
T Consensus 329 ~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 329 RLRPGGVFFLVSNPF 343 (381)
T ss_dssp HEEEEEEEEEEECTT
T ss_pred hcCcCcEEEEEEcCC
Confidence 999999999987653
No 31
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.67 E-value=3.1e-16 Score=150.51 Aligned_cols=147 Identities=16% Similarity=0.227 Sum_probs=102.1
Q ss_pred eeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHH
Q psy2395 357 AYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFA 434 (570)
Q Consensus 357 ~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~a 434 (570)
..+.| .|.+..+.+.++ ..++|.+..+.+.+...+. .++.+|||+|||+|.+++.++..+ ..+|+|+|+|+.+
T Consensus 14 ~ii~G--~~~g~~l~~~~~-~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~ 88 (201)
T 2ift_A 14 RIIAG--LWRGRKLPVLNS-EGLRPTGDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTV 88 (201)
T ss_dssp ECCSS--TTTTCEEECC----------CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHH
T ss_pred EEEEe--eeCCcEecCCCC-CCcCcCHHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHH
Confidence 34444 577888877654 3355555555555444322 156799999999999999877664 3689999999999
Q ss_pred HHHHHHHHHhhcccCC-CCEEEEEccccccccc-CCCc-eeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH
Q psy2395 435 LKIAKKNAKKKLTKYN-IPIKFIKSNWYNNLQN-YKKL-FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI 511 (570)
Q Consensus 435 l~~A~~n~~~~~~~~~-~~v~~~~~D~~~~l~~-~~~~-fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~ 511 (570)
++.|++|+..++ .. .+++++++|+.+..+. ..++ ||+|++||||... .+
T Consensus 89 l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~--------------------------~~ 140 (201)
T 2ift_A 89 ANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFN--------------------------LA 140 (201)
T ss_dssp HHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSSC--------------------------HH
T ss_pred HHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEEEECCCCCCc--------------------------cH
Confidence 999999998742 11 4699999999765432 2468 9999999997521 23
Q ss_pred HHHHHHH--hhccccCeEEEEEEcCCC
Q psy2395 512 KEIVKNA--SKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 512 ~~~l~~~--~~~LkpgG~l~~~~~~~~ 536 (570)
..+++.+ .++|+|||.+++.+....
T Consensus 141 ~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 141 EQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 5566666 678999999999876544
No 32
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.67 E-value=1.7e-15 Score=151.53 Aligned_cols=155 Identities=14% Similarity=0.214 Sum_probs=110.6
Q ss_pred HHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcC-CCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 386 LVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSK-NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 386 l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~-~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
++..+.....+++.+|||+|||+|.+++.+++... ++++|+|+|+|+.|++.|++++...+ ...+++|+++|+.+ +
T Consensus 59 ~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~~~D~~~-~ 135 (261)
T 4gek_A 59 MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVIEGDIRD-I 135 (261)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCTTT-C
T ss_pred HHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEeeccccc-c
Confidence 33444444456788999999999999999998753 36799999999999999999988632 34579999999965 3
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc--CC-------
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG--YN------- 535 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~--~~------- 535 (570)
+. ++||+|+++-..... | ......+++++++.|+|||.+++.-. ..
T Consensus 136 ~~--~~~d~v~~~~~l~~~-------------~----------~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~ 190 (261)
T 4gek_A 136 AI--ENASMVVLNFTLQFL-------------E----------PSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGEL 190 (261)
T ss_dssp CC--CSEEEEEEESCGGGS-------------C----------HHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHH
T ss_pred cc--cccccceeeeeeeec-------------C----------chhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHH
Confidence 43 579999996422100 0 12335789999999999999987421 11
Q ss_pred ---------------------------------CHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 536 ---------------------------------QSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 536 ---------------------------------~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
..+...++|+++||+.++++-...+. -.++|.+
T Consensus 191 ~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF-~~~iA~K 256 (261)
T 4gek_A 191 LFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNF-GSLVALK 256 (261)
T ss_dssp HHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTE-EEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccE-EEEEEEE
Confidence 12345678899999999887543332 2345554
No 33
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.66 E-value=6.3e-16 Score=162.58 Aligned_cols=144 Identities=16% Similarity=0.261 Sum_probs=108.6
Q ss_pred cCeeeeecCCccccc---hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Q psy2395 366 YGLVLNITSDVLIPR---PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA 442 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr---~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~ 442 (570)
.++.+...|++|.+. ..++.+++.+. ..++.+|||+|||+|.+++.+++.++ +.+|+|+|+|+.+++.|++|+
T Consensus 191 ~~~~~~~~pg~Fs~~~~d~~~~~ll~~l~---~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~ 266 (375)
T 4dcm_A 191 TDWTIHNHANVFSRTGLDIGARFFMQHLP---ENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNV 266 (375)
T ss_dssp TTEEEEECTTCTTCSSCCHHHHHHHHTCC---CSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHH
T ss_pred CceEEEeCCCcccCCcccHHHHHHHHhCc---ccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHH
Confidence 357788899999885 34445544331 23457999999999999999999875 689999999999999999999
Q ss_pred HhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcc
Q psy2395 443 KKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYL 522 (570)
Q Consensus 443 ~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~L 522 (570)
..++.....+++|+.+|+.+.++ .++||+|++||||+..... +......+++.+.++|
T Consensus 267 ~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~nppfh~~~~~--------------------~~~~~~~~l~~~~~~L 324 (375)
T 4dcm_A 267 ETNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCL 324 (375)
T ss_dssp HHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEECCCC---------------------------CCHHHHHHHHHHHHE
T ss_pred HHcCCCcCceEEEEechhhccCC--CCCeeEEEECCCcccCccc--------------------CHHHHHHHHHHHHHhC
Confidence 98753333468999999987554 3789999999999743211 0113357899999999
Q ss_pred ccCeEEEEEEcCC
Q psy2395 523 VKNGLLLIEHGYN 535 (570)
Q Consensus 523 kpgG~l~~~~~~~ 535 (570)
+|||++++.....
T Consensus 325 kpgG~l~iv~n~~ 337 (375)
T 4dcm_A 325 KINGELYIVANRH 337 (375)
T ss_dssp EEEEEEEEEEETT
T ss_pred CCCcEEEEEEECC
Confidence 9999999976543
No 34
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.66 E-value=1.9e-16 Score=146.57 Aligned_cols=139 Identities=18% Similarity=0.277 Sum_probs=102.8
Q ss_pred ccccCeeeeecCCccccchhHHHHHHHHHhhcC---CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 363 KEFYGLVLNITSDVLIPRPETELLVDLIVKKTF---EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 363 ~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~---~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
..|++..+..+++ ++|.+..+.+.+...+. +++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|+
T Consensus 7 g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~ 80 (171)
T 1ws6_A 7 GKARGVALKVPAS---ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLK 80 (171)
T ss_dssp GGGTTCEECCCTT---CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHH
T ss_pred cccCCeEecCCCC---CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHH
Confidence 3678999999998 55555555555544432 2677999999999999999998753 4999999999999999
Q ss_pred HHHHhhcccCCCCEEEEEcccccccccC---CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 440 KNAKKKLTKYNIPIKFIKSNWYNNLQNY---KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 440 ~n~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
+|+..++ .+++++++|+.+.++.. .++||+|++||||. .. . ...+..+.+
T Consensus 81 ~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~-~---------------------~~~~~~~~~ 133 (171)
T 1ws6_A 81 ENVRRTG----LGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MD-L---------------------AALFGELLA 133 (171)
T ss_dssp HHHHHHT----CCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SC-T---------------------THHHHHHHH
T ss_pred HHHHHcC----CceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hh-H---------------------HHHHHHHHh
Confidence 9998752 27999999997643321 24799999999987 21 0 012233332
Q ss_pred HHhhccccCeEEEEEEcCCC
Q psy2395 517 NASKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~~~ 536 (570)
.++|+|||++++.++...
T Consensus 134 --~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 134 --SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp --HTCEEEEEEEEEEEETTS
T ss_pred --hcccCCCcEEEEEeCCcc
Confidence 589999999999876543
No 35
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.66 E-value=4.2e-16 Score=149.68 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=103.2
Q ss_pred eeecCcccccCeeeeecCCccccchhHHHHHHHHHhhcCC--CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHH
Q psy2395 357 AYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFE--KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFA 434 (570)
Q Consensus 357 ~~i~g~~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~~~--~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~a 434 (570)
..+.| .|.+..+.+.++ ..++|.+..+.+.+...+.. ++.+|||+|||+|.+++.++..+ ..+|+|+|+|+.+
T Consensus 15 ~ii~g--~~~g~~l~~~~~-~~~rp~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~ 89 (202)
T 2fpo_A 15 RIIGG--QWRGRKLPVPDS-PGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAV 89 (202)
T ss_dssp ECCSG--GGTTCEEECCCC-------CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHH
T ss_pred EEEEE--EEcCcEecCCCC-CCCCCCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHH
Confidence 44555 577888887664 44666666666665544321 56799999999999999877665 3589999999999
Q ss_pred HHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHH
Q psy2395 435 LKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEI 514 (570)
Q Consensus 435 l~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~ 514 (570)
++.|++|+..++. .+++++++|+.+.++...++||+|++||||... .+..+
T Consensus 90 l~~a~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~--------------------------~~~~~ 140 (202)
T 2fpo_A 90 SQQLIKNLATLKA---GNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRG--------------------------LLEET 140 (202)
T ss_dssp HHHHHHHHHHTTC---CSEEEECSCHHHHHSSCCCCEEEEEECCSSSTT--------------------------THHHH
T ss_pred HHHHHHHHHHcCC---CcEEEEECCHHHHHhhcCCCCCEEEECCCCCCC--------------------------cHHHH
Confidence 9999999987421 379999999977555444689999999998621 12445
Q ss_pred HHHHh--hccccCeEEEEEEcC
Q psy2395 515 VKNAS--KYLVKNGLLLIEHGY 534 (570)
Q Consensus 515 l~~~~--~~LkpgG~l~~~~~~ 534 (570)
++.+. ++|+|||++++.+..
T Consensus 141 l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 141 INLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHHHhcCccCCCcEEEEEECC
Confidence 55554 469999999987754
No 36
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.66 E-value=2.1e-15 Score=150.09 Aligned_cols=153 Identities=24% Similarity=0.322 Sum_probs=118.4
Q ss_pred CeeeeecCCccccc---hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 367 GLVLNITSDVLIPR---PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 367 ~~~~~v~~~~~~pr---~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
...+.++|+.+... +.+..+++.+... ..++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+.
T Consensus 88 ~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~ 163 (254)
T 2nxc_A 88 EIPLVIEPGMAFGTGHHETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAK 163 (254)
T ss_dssp SEEEECCCC-----CCSHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHH
T ss_pred ceEEEECCCccccCCCCHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHH
Confidence 45566677665433 5666666666554 4567899999999999999998765 399999999999999999998
Q ss_pred hhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 444 KKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 444 ~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
.+ +..+++.++|+.+.++ .++||+|++|+++ ..+..++..+.++|+
T Consensus 164 ~~----~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~----------------------------~~~~~~l~~~~~~Lk 209 (254)
T 2nxc_A 164 RN----GVRPRFLEGSLEAALP--FGPFDLLVANLYA----------------------------ELHAALAPRYREALV 209 (254)
T ss_dssp HT----TCCCEEEESCHHHHGG--GCCEEEEEEECCH----------------------------HHHHHHHHHHHHHEE
T ss_pred Hc----CCcEEEEECChhhcCc--CCCCCEEEECCcH----------------------------HHHHHHHHHHHHHcC
Confidence 75 3238999999977543 3689999998753 134688899999999
Q ss_pred cCeEEEEE-EcCCCHHHHHHHHHHCCCeeEEEEec
Q psy2395 524 KNGLLLIE-HGYNQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 524 pgG~l~~~-~~~~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
|||++++. +...+.+.+.+.+.++||..+.+..+
T Consensus 210 pgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 210 PGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAE 244 (254)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEecc
Confidence 99999884 45677889999999999998876653
No 37
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.66 E-value=3.8e-16 Score=146.03 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=94.3
Q ss_pred CCccccchhHHHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCC
Q psy2395 374 SDVLIPRPETELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNI 451 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~ 451 (570)
|....++|.++.+.+.+...+. .++.+|||+|||+|.+++.+++.. ..+|+|+|+|+.+++.|++|+..++ ...
T Consensus 6 p~~~~~rp~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~~~ 81 (177)
T 2esr_A 6 LDGKITRPTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTK--AEN 81 (177)
T ss_dssp ------------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTT--CGG
T ss_pred CCCCCCCcCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcC--CCC
Confidence 3445678888878777776653 367799999999999999999773 4699999999999999999998642 223
Q ss_pred CEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHh--hccccCeEEE
Q psy2395 452 PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNAS--KYLVKNGLLL 529 (570)
Q Consensus 452 ~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~--~~LkpgG~l~ 529 (570)
+++++++|+.+.++...++||+|++||||.. .....+++.+. ++|+|||+++
T Consensus 82 ~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~--------------------------~~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 82 RFTLLKMEAERAIDCLTGRFDLVFLDPPYAK--------------------------ETIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp GEEEECSCHHHHHHHBCSCEEEEEECCSSHH--------------------------HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ceEEEECcHHHhHHhhcCCCCEEEECCCCCc--------------------------chHHHHHHHHHhCCCcCCCcEEE
Confidence 6999999997755444467999999999841 12344555554 8999999999
Q ss_pred EEEcCCC
Q psy2395 530 IEHGYNQ 536 (570)
Q Consensus 530 ~~~~~~~ 536 (570)
+.++...
T Consensus 136 ~~~~~~~ 142 (177)
T 2esr_A 136 CETDKTV 142 (177)
T ss_dssp EEEETTC
T ss_pred EEECCcc
Confidence 9876543
No 38
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.65 E-value=2.6e-15 Score=146.12 Aligned_cols=128 Identities=17% Similarity=0.180 Sum_probs=106.5
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.+++.+|||+|||||++++.+++.++ ..+|+|+|+|+.+++.|++|+..++ ...+++++++|+++.++. ..+||+|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l~~-~~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAFEE-TDQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhccc-CcCCCEE
Confidence 35678999999999999999999875 5799999999999999999999864 334699999999887754 1269988
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~ 554 (570)
+.. | .|-..+..++..+...|+++|++++. +....+.++++|.++||..+..
T Consensus 89 via--------------------------G-~Gg~~i~~Il~~~~~~L~~~~~lVlq-~~~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 89 TIA--------------------------G-MGGRLIARILEEGLGKLANVERLILQ-PNNREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp EEE--------------------------E-ECHHHHHHHHHHTGGGCTTCCEEEEE-ESSCHHHHHHHHHHTTEEEEEE
T ss_pred EEc--------------------------C-CChHHHHHHHHHHHHHhCCCCEEEEE-CCCCHHHHHHHHHHCCCEEEEE
Confidence 861 1 13356889999999999999998874 4478999999999999998754
No 39
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.65 E-value=2.2e-15 Score=144.31 Aligned_cols=153 Identities=22% Similarity=0.281 Sum_probs=116.8
Q ss_pred eeeeecCCccccc---hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 368 LVLNITSDVLIPR---PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 368 ~~~~v~~~~~~pr---~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
..+.++++..... +.+..+.+.+... ..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++|+..
T Consensus 29 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 105 (205)
T 3grz_A 29 EIIRLDPGLAFGTGNHQTTQLAMLGIERA-MVKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAAL 105 (205)
T ss_dssp EEEEESCC-----CCHHHHHHHHHHHHHH-CSSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH
T ss_pred eeEEecCCcccCCCCCccHHHHHHHHHHh-ccCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHH
Confidence 3445555553222 4555666666543 3567899999999999999998753 46999999999999999999987
Q ss_pred hcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc
Q psy2395 445 KLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK 524 (570)
Q Consensus 445 ~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp 524 (570)
++. .+++++++|+.+.. .++||+|++|+|+. .+..+++.+.++|+|
T Consensus 106 ~~~---~~v~~~~~d~~~~~---~~~fD~i~~~~~~~----------------------------~~~~~l~~~~~~L~~ 151 (205)
T 3grz_A 106 NGI---YDIALQKTSLLADV---DGKFDLIVANILAE----------------------------ILLDLIPQLDSHLNE 151 (205)
T ss_dssp TTC---CCCEEEESSTTTTC---CSCEEEEEEESCHH----------------------------HHHHHGGGSGGGEEE
T ss_pred cCC---CceEEEeccccccC---CCCceEEEECCcHH----------------------------HHHHHHHHHHHhcCC
Confidence 421 13999999997643 37899999998642 357889999999999
Q ss_pred CeEEEEE-EcCCCHHHHHHHHHHCCCeeEEEEec
Q psy2395 525 NGLLLIE-HGYNQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 525 gG~l~~~-~~~~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
||++++. ....+...+.+++.+.||..+.+..+
T Consensus 152 gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 152 DGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCEEEEEecCcccHHHHHHHHHHcCCceEEeecc
Confidence 9999885 56677888999999999998876653
No 40
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=4.7e-15 Score=141.01 Aligned_cols=143 Identities=16% Similarity=0.175 Sum_probs=104.5
Q ss_pred cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeE
Q psy2395 394 TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 394 ~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
...++.+|||+|||+|.++..+++...+..+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+.....+++||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhccCCceE
Confidence 34567899999999999999999885335699999999999999999998742 2246999999986654344578999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC------CHHHHHHHHHH-
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN------QSNLVRKLLFK- 546 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~l~~ll~~- 546 (570)
|++||||++..+.... ........+++.+.++|+|||++++..... ....+.+++..
T Consensus 97 v~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l 160 (197)
T 3eey_A 97 VMFNLGYLPSGDHSIS----------------TRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGV 160 (197)
T ss_dssp EEEEESBCTTSCTTCB----------------CCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTS
T ss_pred EEEcCCcccCcccccc----------------cCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhC
Confidence 9999999764321100 112345679999999999999998865321 23445556554
Q ss_pred --CCCeeEEE
Q psy2395 547 --YGFSDIKS 554 (570)
Q Consensus 547 --~Gf~~i~~ 554 (570)
.+|.....
T Consensus 161 ~~~~~~v~~~ 170 (197)
T 3eey_A 161 DQKKFIVQRT 170 (197)
T ss_dssp CTTTEEEEEE
T ss_pred CCCcEEEEEE
Confidence 45766543
No 41
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.65 E-value=2.3e-15 Score=155.71 Aligned_cols=166 Identities=19% Similarity=0.221 Sum_probs=113.9
Q ss_pred cCeeeeecCCccccc---hhHHHHHHHHHhhc--CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 366 YGLVLNITSDVLIPR---PETELLVDLIVKKT--FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr---~~t~~l~~~~~~~~--~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.+..|.+++..+... ++.+...+++.... ..++.+|||+|||+|.+++.+++.+ ++|+|+|+|+.+++.|++
T Consensus 117 ~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g---a~V~~VD~s~~al~~a~~ 193 (332)
T 2igt_A 117 LGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKAIGWAKE 193 (332)
T ss_dssp TTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT---CEEEEECSCHHHHHHHHH
T ss_pred CCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHH
Confidence 456666665444332 34444333333322 2356799999999999999999754 499999999999999999
Q ss_pred HHHhhcccCCC-CEEEEEcccccccccC---CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 441 NAKKKLTKYNI-PIKFIKSNWYNNLQNY---KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 441 n~~~~~~~~~~-~v~~~~~D~~~~l~~~---~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
|+..++ ... ++.++++|+++.+... .++||+|++||||+..... .. + ......+..++.
T Consensus 194 n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~----~~--------~---~~~~~~~~~ll~ 256 (332)
T 2igt_A 194 NQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTH----GE--------V---WQLFDHLPLMLD 256 (332)
T ss_dssp HHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTT----CC--------E---EEHHHHHHHHHH
T ss_pred HHHHcC--CCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCch----HH--------H---HHHHHHHHHHHH
Confidence 999763 222 4999999998755321 3689999999997632210 00 0 012356788999
Q ss_pred HHhhccccCeEEEEEEcCCC---HHHHHHHHH----HCCCee
Q psy2395 517 NASKYLVKNGLLLIEHGYNQ---SNLVRKLLF----KYGFSD 551 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~~~---~~~l~~ll~----~~Gf~~ 551 (570)
.+.++|+|||++++.+.... ...+.+++. +.|+..
T Consensus 257 ~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 257 ICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp HHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEE
T ss_pred HHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 99999999999888765432 344555554 578765
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.64 E-value=1.5e-15 Score=155.08 Aligned_cols=150 Identities=14% Similarity=0.125 Sum_probs=118.7
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.++..++....++.+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+. +.. ++||+|
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~-~~~-~~fD~v 191 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKL-DTR-EGYDLL 191 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGC-CCC-SCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcC-Ccc-CCeEEE
Confidence 4567899999999999999986322236899999999999999999998642 233599999999763 332 799999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--------------------
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-------------------- 534 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-------------------- 534 (570)
+++.+++..++ ......+++.+.+.|+|||++++....
T Consensus 192 ~~~~~~~~~~~----------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~ 249 (305)
T 3ocj_A 192 TSNGLNIYEPD----------------------DARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHD 249 (305)
T ss_dssp ECCSSGGGCCC----------------------HHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHH
T ss_pred EECChhhhcCC----------------------HHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccch
Confidence 99887653211 123456899999999999999975411
Q ss_pred -------------------CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEeC
Q psy2395 535 -------------------NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKIS 570 (570)
Q Consensus 535 -------------------~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~~ 570 (570)
...+.+.++++++||..+.+..+..+...+++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 250 LQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred hhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 246788999999999999999888888899998864
No 43
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.64 E-value=3.4e-15 Score=150.65 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=112.5
Q ss_pred cCeeeeecC--Cccccc--hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHH
Q psy2395 366 YGLVLNITS--DVLIPR--PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKN 441 (570)
Q Consensus 366 ~~~~~~v~~--~~~~pr--~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n 441 (570)
.|..|.++. ..|.|+ .....+... ..++.+|||+|||+|.+++.+++.+. .+|+|+|+|+.+++.|++|
T Consensus 95 ~g~~f~~d~~~~~f~~~~~~~~~~l~~~-----~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n 167 (278)
T 2frn_A 95 NGIKYKLDVAKIMFSPANVKERVRMAKV-----AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVEN 167 (278)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHHHHH-----CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHH
T ss_pred CCEEEEEEccceeEcCCcHHHHHHHHHh-----CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHH
Confidence 466777753 556666 333333222 34678999999999999999998874 3899999999999999999
Q ss_pred HHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhc
Q psy2395 442 AKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKY 521 (570)
Q Consensus 442 ~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~ 521 (570)
+..|+ ...+++++++|+.+... .++||+|++|||+.. ..++..+.++
T Consensus 168 ~~~n~--~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p~~~-----------------------------~~~l~~~~~~ 214 (278)
T 2frn_A 168 IHLNK--VEDRMSAYNMDNRDFPG--ENIADRILMGYVVRT-----------------------------HEFIPKALSI 214 (278)
T ss_dssp HHHTT--CTTTEEEECSCTTTCCC--CSCEEEEEECCCSSG-----------------------------GGGHHHHHHH
T ss_pred HHHcC--CCceEEEEECCHHHhcc--cCCccEEEECCchhH-----------------------------HHHHHHHHHH
Confidence 99864 23359999999977554 478999999999642 3456677889
Q ss_pred cccCeEEEEEEc-------CCCHHHHHHHHHHCCCeeEE
Q psy2395 522 LVKNGLLLIEHG-------YNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 522 LkpgG~l~~~~~-------~~~~~~l~~ll~~~Gf~~i~ 553 (570)
|+|||++++... ....+.+.+.+.+.||....
T Consensus 215 LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 215 AKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp EEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 999999987432 24567788999999998644
No 44
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=5.2e-15 Score=156.22 Aligned_cols=165 Identities=11% Similarity=0.172 Sum_probs=117.0
Q ss_pred cCeeeeecCC-----ccccc-hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 366 YGLVLNITSD-----VLIPR-PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 366 ~~~~~~v~~~-----~~~pr-~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.|.+|.+++. .|.+. ..++.++... . .++.+|||+|||||.+++.+|..+ ..+|+|+|+|+.|++.|+
T Consensus 179 ~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~---~-~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~ 252 (385)
T 2b78_A 179 NGISYNVFLNDGLMTGIFLDQRQVRNELING---S-AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSL 252 (385)
T ss_dssp TTEEEEECSSSSSCCSSCGGGHHHHHHHHHT---T-TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHH
T ss_pred CCEEEEEeccccccCCcCCcHHHHHHHHHHH---h-cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHH
Confidence 5888999886 55443 3344443322 1 356799999999999999999754 358999999999999999
Q ss_pred HHHHhhcccCCC-CEEEEEcccccccccC---CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHH
Q psy2395 440 KNAKKKLTKYNI-PIKFIKSNWYNNLQNY---KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIV 515 (570)
Q Consensus 440 ~n~~~~~~~~~~-~v~~~~~D~~~~l~~~---~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l 515 (570)
+|+..|+ ... +++|+++|+++.++.. ..+||+|++||||+..... ...+....+..++
T Consensus 253 ~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~----------------~~~~~~~~~~~ll 314 (385)
T 2b78_A 253 AHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKK----------------EVFSVSKDYHKLI 314 (385)
T ss_dssp HHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC---------------------CCCCHHHHHHHHH
T ss_pred HHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChh----------------hHHHHHHHHHHHH
Confidence 9999864 222 6999999997755421 3589999999999632110 0113346778899
Q ss_pred HHHhhccccCeEEEEEEcCCC--HHH----HHHHHHHCCCeeEEE
Q psy2395 516 KNASKYLVKNGLLLIEHGYNQ--SNL----VRKLLFKYGFSDIKS 554 (570)
Q Consensus 516 ~~~~~~LkpgG~l~~~~~~~~--~~~----l~~ll~~~Gf~~i~~ 554 (570)
..+.+.|+|||++++.+.... .+. +...+.+.|...+..
T Consensus 315 ~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 315 RQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp HHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 999999999999999876543 233 334455677774443
No 45
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.63 E-value=4.2e-15 Score=156.89 Aligned_cols=155 Identities=18% Similarity=0.238 Sum_probs=115.2
Q ss_pred cccchhHHHHHH---HHHhhc-----------CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Q psy2395 377 LIPRPETELLVD---LIVKKT-----------FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA 442 (570)
Q Consensus 377 ~~pr~~t~~l~~---~~~~~~-----------~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~ 442 (570)
.+|++.++.+.. .++... ..++.+|||+|||+|.++..+++...++.+|+|+|+|+.+++.|++|+
T Consensus 49 ~~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~ 128 (383)
T 4fsd_A 49 AVPESHRKILADIADEVLEKFYGCGSTLPADGSLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYV 128 (383)
T ss_dssp -CCHHHHHHHHTSCHHHHHHCCSCCCCCSCGGGGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHhhHHHHHHhcCCCCccccccCCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 678887777755 333322 236789999999999999999987644679999999999999999998
Q ss_pred Hhhcc-----cCCCCEEEEEccccccc-----ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHH
Q psy2395 443 KKKLT-----KYNIPIKFIKSNWYNNL-----QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIK 512 (570)
Q Consensus 443 ~~~~~-----~~~~~v~~~~~D~~~~l-----~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~ 512 (570)
..+.. ....+++|+++|+.+.. +..+++||+|++|..+...+ ...
T Consensus 129 ~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~-------------------------d~~ 183 (383)
T 4fsd_A 129 EYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLST-------------------------NKL 183 (383)
T ss_dssp HHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCS-------------------------CHH
T ss_pred HHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCC-------------------------CHH
Confidence 75411 01247999999997631 33357999999986544221 236
Q ss_pred HHHHHHhhccccCeEEEEEEcC-----------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 513 EIVKNASKYLVKNGLLLIEHGY-----------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 513 ~~l~~~~~~LkpgG~l~~~~~~-----------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.+++++.++|+|||++++.... ...+.+.++|.++||..+++..
T Consensus 184 ~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 184 ALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 8899999999999999885311 2237889999999999876654
No 46
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.63 E-value=6.7e-15 Score=143.46 Aligned_cols=142 Identities=18% Similarity=0.117 Sum_probs=111.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.+++.+|||+|||+|++++.+++.++ ..+|+|+|+|+.+++.|++|+..++ ...+++++++|+++.+.. .++||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~~-~~~~D~I 94 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFEE-ADNIDTI 94 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhcccc-ccccCEE
Confidence 35678999999999999999999875 5789999999999999999999864 344799999999887653 2379998
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~ 554 (570)
+. +| -|-+.+..++......|+++|+|++. |....+.++++|.++||..+..
T Consensus 95 vi--------------------------aG-mGg~lI~~IL~~~~~~l~~~~~lIlq-p~~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 95 TI--------------------------CG-MGGRLIADILNNDIDKLQHVKTLVLQ-PNNREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EE--------------------------EE-ECHHHHHHHHHHTGGGGTTCCEEEEE-ESSCHHHHHHHHHHTTEEEEEE
T ss_pred EE--------------------------eC-CchHHHHHHHHHHHHHhCcCCEEEEE-CCCChHHHHHHHHHCCCEEEEE
Confidence 75 01 12367889999999999999988764 4567899999999999998653
Q ss_pred E--ecCCCCceEEEEE
Q psy2395 555 W--RDLSGIERVTQGK 568 (570)
Q Consensus 555 ~--~D~~g~~R~~~~~ 568 (570)
. .+-.....++.++
T Consensus 147 ~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 147 DILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEC--CEEEEEEEE
T ss_pred EEEEECCEEEEEEEEE
Confidence 3 4444444555543
No 47
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=3.1e-15 Score=144.89 Aligned_cols=161 Identities=17% Similarity=0.130 Sum_probs=115.0
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCE
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPI 453 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v 453 (570)
+.+++|.|++ ...++... ...++.+|||+|||+|.+++.+|+..+ +.+|+|+|+|+.+++.|++|+..++ -.++
T Consensus 17 ~~~~~~~~~~-~~~~~~~~-f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~---~~nv 90 (213)
T 2fca_A 17 ADIAISNPAD-YKGKWNTV-FGNDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSE---AQNV 90 (213)
T ss_dssp TTTBCSCGGG-GTTCHHHH-HTSCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSC---CSSE
T ss_pred ccEEecCccc-cCCCHHHH-cCCCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcC---CCCE
Confidence 4555565543 22222211 234567999999999999999999875 6899999999999999999998742 2369
Q ss_pred EEEEcccccccc-cCCCceeEEEECCC--CCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 454 KFIKSNWYNNLQ-NYKKLFNIIVANPP--YIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 454 ~~~~~D~~~~l~-~~~~~fD~Iv~NPP--y~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
.++++|+.+... ..+++||.|++|.| |... .++++. -.+..+++.+.++|+|||.+++
T Consensus 91 ~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~----------~~~~~r---------l~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 91 KLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKK----------RHEKRR---------LTYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp EEECCCGGGHHHHCCTTSCCEEEEESCCCCCSG----------GGGGGS---------TTSHHHHHHHHHHHTTSCEEEE
T ss_pred EEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCc----------cccccc---------cCcHHHHHHHHHHcCCCCEEEE
Confidence 999999976321 22468999999854 2211 011110 0236889999999999999999
Q ss_pred EEcC-CCHHHHHHHHHHCCCeeEEEEecCC
Q psy2395 531 EHGY-NQSNLVRKLLFKYGFSDIKSWRDLS 559 (570)
Q Consensus 531 ~~~~-~~~~~l~~ll~~~Gf~~i~~~~D~~ 559 (570)
.+.. .....+.+.+.+.||..+....|+.
T Consensus 152 ~td~~~~~~~~~~~~~~~g~~~~~~~~d~~ 181 (213)
T 2fca_A 152 KTDNRGLFEYSLKSFSEYGLLLTYVSLDLH 181 (213)
T ss_dssp EESCHHHHHHHHHHHHHHTCEEEEEESSGG
T ss_pred EeCCHHHHHHHHHHHHHCCCcccccccccc
Confidence 8754 3456677888888999888877754
No 48
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.63 E-value=5.7e-15 Score=141.92 Aligned_cols=147 Identities=20% Similarity=0.254 Sum_probs=112.2
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
..+.+.++.....++.+|||+|||+|.++..+++. + +.+|+|+|+|+.+++.|++++..++ ...+++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~- 104 (219)
T 3dlc_A 30 PIIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHN- 104 (219)
T ss_dssp HHHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTB-
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHH-
Confidence 34445555444433449999999999999999987 3 5799999999999999999998742 23469999999965
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC--------
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN-------- 535 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~-------- 535 (570)
++..+++||+|+++..+.... ....+++.+.+.|+|||.+++.....
T Consensus 105 ~~~~~~~~D~v~~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 159 (219)
T 3dlc_A 105 IPIEDNYADLIVSRGSVFFWE-------------------------DVATAFREIYRILKSGGKTYIGGGFGNKELRDSI 159 (219)
T ss_dssp CSSCTTCEEEEEEESCGGGCS-------------------------CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHH
T ss_pred CCCCcccccEEEECchHhhcc-------------------------CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHH
Confidence 333457899999986543211 23678999999999999999864322
Q ss_pred ----------------------CHHHHHHHHHHCCCeeEEEEecCCC
Q psy2395 536 ----------------------QSNLVRKLLFKYGFSDIKSWRDLSG 560 (570)
Q Consensus 536 ----------------------~~~~l~~ll~~~Gf~~i~~~~D~~g 560 (570)
..+.+.++|+++||+.+++..+..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 206 (219)
T 3dlc_A 160 SAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEG 206 (219)
T ss_dssp HHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTE
T ss_pred HHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCc
Confidence 1267888999999999999877655
No 49
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=1.2e-14 Score=136.86 Aligned_cols=145 Identities=14% Similarity=0.134 Sum_probs=98.3
Q ss_pred HHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC
Q psy2395 388 DLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY 467 (570)
Q Consensus 388 ~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~ 467 (570)
..++.....++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..++ . .+++++++|+.......
T Consensus 13 ~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~--~-~~v~~~~~~~~~l~~~~ 86 (185)
T 3mti_A 13 HDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLG--I-ENTELILDGHENLDHYV 86 (185)
T ss_dssp HHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHT--C-CCEEEEESCGGGGGGTC
T ss_pred HHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC--C-CcEEEEeCcHHHHHhhc
Confidence 3333334457889999999999999999976 4799999999999999999998753 2 46999997775432233
Q ss_pred CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC------CHHHHH
Q psy2395 468 KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN------QSNLVR 541 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~l~ 541 (570)
+++||+|++|++|.+..... .. ........+++.+.+.|+|||++++.+... ....+.
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~-----~~-----------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 150 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKS-----VI-----------TKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVL 150 (185)
T ss_dssp CSCEEEEEEEEC---------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHH
T ss_pred cCCcCEEEEeCCCCCCcchh-----cc-----------cChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHH
Confidence 57899999999887642210 00 011344678899999999999998865322 224455
Q ss_pred HHHHH---CCCeeEEE
Q psy2395 542 KLLFK---YGFSDIKS 554 (570)
Q Consensus 542 ~ll~~---~Gf~~i~~ 554 (570)
+++.. .+|.....
T Consensus 151 ~~~~~l~~~~~~~~~~ 166 (185)
T 3mti_A 151 EYVIGLDQRVFTAMLY 166 (185)
T ss_dssp HHHHHSCTTTEEEEEE
T ss_pred HHHHhCCCceEEEEEe
Confidence 55654 35766543
No 50
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=1.5e-14 Score=138.55 Aligned_cols=122 Identities=14% Similarity=0.203 Sum_probs=101.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.+++.+++.++ ..+|+|+|+|+.+++.|++|+..++ -.+++++++|+.+.+.. .++||+|
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~D~i 112 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAPEGLDD-LPDPDRV 112 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTTTTCTT-SCCCSEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChhhhhhc-CCCCCEE
Confidence 35678999999999999999999875 5899999999999999999998753 14699999999765543 2679999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHHHHHHHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSNLVRKLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~l~~ll~~~Gf 549 (570)
++++++. .+..+++.+.+.|+|||++++.... ...+.+.+++.+.||
T Consensus 113 ~~~~~~~----------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 113 FIGGSGG----------------------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp EESCCTT----------------------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred EECCCCc----------------------------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 9987642 2368899999999999999987543 567788899999998
No 51
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.62 E-value=3.3e-15 Score=153.80 Aligned_cols=178 Identities=14% Similarity=0.212 Sum_probs=127.8
Q ss_pred CCceeecCc-ccccCeeeeecCCccccchh----HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEE
Q psy2395 354 EPIAYIIGK-KEFYGLVLNITSDVLIPRPE----TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIAT 428 (570)
Q Consensus 354 ~p~~~i~g~-~~f~~~~~~v~~~~~~pr~~----t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gv 428 (570)
.|.++|.+. ..++|..+.++..+.+|+++ ++.++...+.. .+++.+|||+|||+|.++..+++..+ ..+|+++
T Consensus 69 s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~-~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~v 146 (321)
T 2pt6_A 69 SKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTV-SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDIC 146 (321)
T ss_dssp CSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHH-SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEE
T ss_pred CCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEE
Confidence 678898886 47789999999999999977 45555433322 24567999999999999999997643 5799999
Q ss_pred eCCHHHHHHHHHHHHhhcccC-CCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCC
Q psy2395 429 DISKFALKIAKKNAKKKLTKY-NIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNG 507 (570)
Q Consensus 429 Dis~~al~~A~~n~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~g 507 (570)
|+|+.+++.|++|+....... ..+++++++|+.+.+....++||+|++|++-.. .|..
T Consensus 147 Dis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~-------------~~~~-------- 205 (321)
T 2pt6_A 147 EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPI-------------GPAE-------- 205 (321)
T ss_dssp ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSS-------------SGGG--------
T ss_pred ECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCC-------------Ccch--------
Confidence 999999999999986421011 347999999997765443578999999974210 0100
Q ss_pred hHHH-HHHHHHHhhccccCeEEEEEEcC--CCHHHHHH---HHHHCCCeeEEEEe
Q psy2395 508 LSSI-KEIVKNASKYLVKNGLLLIEHGY--NQSNLVRK---LLFKYGFSDIKSWR 556 (570)
Q Consensus 508 l~~~-~~~l~~~~~~LkpgG~l~~~~~~--~~~~~l~~---ll~~~Gf~~i~~~~ 556 (570)
..+ ..+++.+.+.|+|||++++..+. .+.+.+.. .+++ -|..+..+.
T Consensus 206 -~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~-~F~~v~~~~ 258 (321)
T 2pt6_A 206 -TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKK-LFKKVEYAN 258 (321)
T ss_dssp -GGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred -hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH-HCCCeEEEE
Confidence 112 67888999999999999997643 34444444 4444 376666553
No 52
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.62 E-value=3.1e-15 Score=154.68 Aligned_cols=168 Identities=13% Similarity=0.210 Sum_probs=123.3
Q ss_pred CCCceee-cCcccccCeeeeecCCccccchh----HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEE
Q psy2395 353 GEPIAYI-IGKKEFYGLVLNITSDVLIPRPE----TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIA 427 (570)
Q Consensus 353 ~~p~~~i-~g~~~f~~~~~~v~~~~~~pr~~----t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~g 427 (570)
..|.||| .+...|+|..+.++..+.+|+++ ++.++...+.. .+++.+|||+|||+|.++..+++..+ ..+|++
T Consensus 72 ~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~-~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~ 149 (334)
T 1xj5_A 72 KSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCS-IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDM 149 (334)
T ss_dssp ECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTT-SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEE
T ss_pred ecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhh-CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEE
Confidence 4789998 89999999999999999999865 45555433221 24567999999999999999997643 579999
Q ss_pred EeCCHHHHHHHHHHHHhhcccC-CCCEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccC
Q psy2395 428 TDISKFALKIAKKNAKKKLTKY-NIPIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYS 505 (570)
Q Consensus 428 vDis~~al~~A~~n~~~~~~~~-~~~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~ 505 (570)
+|+|+.+++.|++|+....... ..+++++++|+.+.++.. .++||+|++|++-... ..
T Consensus 150 VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~--------------------~~ 209 (334)
T 1xj5_A 150 CEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG--------------------PA 209 (334)
T ss_dssp EESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTS--------------------GG
T ss_pred EECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccC--------------------cc
Confidence 9999999999999986421011 347999999997755432 3689999999752100 00
Q ss_pred CChHHHHHHHHHHhhccccCeEEEEEE--cCCCHHHHHHH
Q psy2395 506 NGLSSIKEIVKNASKYLVKNGLLLIEH--GYNQSNLVRKL 543 (570)
Q Consensus 506 ~gl~~~~~~l~~~~~~LkpgG~l~~~~--~~~~~~~l~~l 543 (570)
.+ .+...+++.+.++|+|||++++.. +..+...+...
T Consensus 210 ~~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~ 248 (334)
T 1xj5_A 210 KE-LFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDI 248 (334)
T ss_dssp GG-GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHH
T ss_pred hh-hhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHH
Confidence 11 124788999999999999999853 44454443333
No 53
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.62 E-value=4.8e-15 Score=154.68 Aligned_cols=157 Identities=19% Similarity=0.171 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 381 PETELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 381 ~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
|..+.+...++... ..++.+|||+|||+|.+++.++..+.+..+|+|+|+|+.+++.|++|+..++ .. +++|.++|
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g--~~-~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG--LS-WIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT--CT-TCEEEECC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC--CC-ceEEEeCC
Confidence 33344554444432 2467799999999999999999876225799999999999999999999753 22 69999999
Q ss_pred cccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHH
Q psy2395 460 WYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNL 539 (570)
Q Consensus 460 ~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 539 (570)
+.+.. .....||+|++||||...... ..+....|..+++.+.+.|+|||.+++.++. ...
T Consensus 263 ~~~~~-~~~~~~D~Ii~npPyg~r~~~-----------------~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~--~~~ 322 (354)
T 3tma_A 263 ARHLP-RFFPEVDRILANPPHGLRLGR-----------------KEGLFHLYWDFLRGALALLPPGGRVALLTLR--PAL 322 (354)
T ss_dssp GGGGG-GTCCCCSEEEECCCSCC---------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC--HHH
T ss_pred hhhCc-cccCCCCEEEECCCCcCccCC-----------------cccHHHHHHHHHHHHHHhcCCCcEEEEEeCC--HHH
Confidence 97643 334679999999999742110 0112356789999999999999999998764 334
Q ss_pred HHHHHHHCCCeeEEEEecCCCC
Q psy2395 540 VRKLLFKYGFSDIKSWRDLSGI 561 (570)
Q Consensus 540 l~~ll~~~Gf~~i~~~~D~~g~ 561 (570)
+..++. .||...+..+-+.|.
T Consensus 323 ~~~~~~-~g~~~~~~~~l~~g~ 343 (354)
T 3tma_A 323 LKRALP-PGFALRHARVVEQGG 343 (354)
T ss_dssp HHHHCC-TTEEEEEEEECCBTT
T ss_pred HHHHhh-cCcEEEEEEEEEeCC
Confidence 455555 899887766654443
No 54
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.61 E-value=5.2e-15 Score=158.82 Aligned_cols=162 Identities=14% Similarity=0.160 Sum_probs=113.6
Q ss_pred ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEE
Q psy2395 376 VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKF 455 (570)
Q Consensus 376 ~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~ 455 (570)
++++.+.+..+...+ . ..++.+|||+|||+|..++.+|...+...+|+|+|+|+.+++.+++|+..++ ..+.+
T Consensus 83 ~~vQd~ss~l~a~~L-~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~v~~ 155 (464)
T 3m6w_A 83 YYIQEPSAQAVGVLL-D--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----APLAV 155 (464)
T ss_dssp EEECCTTTHHHHHHH-C--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CCCEE
T ss_pred EEEECHHHHHHHHhc-C--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CeEEE
Confidence 334444444444433 2 3567899999999999999999887545799999999999999999999853 23899
Q ss_pred EEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCCh----HHHHHHHHHHhhccccCeEEEEE
Q psy2395 456 IKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGL----SSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 456 ~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl----~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+++|+.+......++||+|++|||+....... ..|........+.+ .....++..+.++|||||++++.
T Consensus 156 ~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~r-------r~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys 228 (464)
T 3m6w_A 156 TQAPPRALAEAFGTYFHRVLLDAPCSGEGMFR-------KDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS 228 (464)
T ss_dssp ECSCHHHHHHHHCSCEEEEEEECCCCCGGGTT-------TCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EECCHHHhhhhccccCCEEEECCCcCCccccc-------cChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99998664332347899999999987543221 22222222122222 34478999999999999999886
Q ss_pred EcC----CCHHHHHHHHHHC-CCee
Q psy2395 532 HGY----NQSNLVRKLLFKY-GFSD 551 (570)
Q Consensus 532 ~~~----~~~~~l~~ll~~~-Gf~~ 551 (570)
+.. .+...+..++.++ +|..
T Consensus 229 TCs~~~eEne~vv~~~l~~~~~~~l 253 (464)
T 3m6w_A 229 TCTFAPEENEGVVAHFLKAHPEFRL 253 (464)
T ss_dssp ESCCCGGGTHHHHHHHHHHCTTEEE
T ss_pred eccCchhcCHHHHHHHHHHCCCcEE
Confidence 533 4556677777776 3543
No 55
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.60 E-value=1.8e-14 Score=139.17 Aligned_cols=145 Identities=14% Similarity=0.064 Sum_probs=112.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.++..+++.+.+..+|+|+|+|+.+++.|++++..++ ..++.++++|+.+ ++..+++||+|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~-~~~~~~~fD~v 110 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENK-IPLPDNTVDFI 110 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTB-CSSCSSCEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeccccc-CCCCCCCeeEE
Confidence 3567799999999999999999887445799999999999999999998642 1269999999965 33335789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-------------CCHHHHH
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-------------NQSNLVR 541 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-------------~~~~~l~ 541 (570)
+++..+... .....+++.+.++|+|||.+++.... ...+.+.
T Consensus 111 ~~~~~l~~~-------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3dh0_A 111 FMAFTFHEL-------------------------SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVG 165 (219)
T ss_dssp EEESCGGGC-------------------------SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHH
T ss_pred Eeehhhhhc-------------------------CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHH
Confidence 997543311 12368899999999999999885421 2368899
Q ss_pred HHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 542 KLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 542 ~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
.++.++||..+++. +..+...++++++
T Consensus 166 ~~l~~~Gf~~~~~~-~~~~~~~~~~~~k 192 (219)
T 3dh0_A 166 LILEDAGIRVGRVV-EVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHTTCEEEEEE-EETTTEEEEEEEC
T ss_pred HHHHHCCCEEEEEE-eeCCceEEEEEEe
Confidence 99999999988764 4566667777664
No 56
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=1.6e-14 Score=142.92 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 381 PETELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 381 ~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
|.+...++.++... ..++.+|||+|||+|.++..++... +.+|+|+|+|+.+++.|++++...+ ...+++++++|
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d 94 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHND 94 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECC
Confidence 33344455555443 3567899999999999999999876 4699999999999999999998642 23469999999
Q ss_pred cccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----
Q psy2395 460 WYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----- 534 (570)
Q Consensus 460 ~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----- 534 (570)
+.+. +. +++||+|+++......+ ....+++++.++|+|||++++..+.
T Consensus 95 ~~~~-~~-~~~fD~V~~~~~~~~~~-------------------------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~ 147 (256)
T 1nkv_A 95 AAGY-VA-NEKCDVAACVGATWIAG-------------------------GFAGAEELLAQSLKPGGIMLIGEPYWRQLP 147 (256)
T ss_dssp CTTC-CC-SSCEEEEEEESCGGGTS-------------------------SSHHHHHHHTTSEEEEEEEEEEEEEETTCC
T ss_pred hHhC-Cc-CCCCCEEEECCChHhcC-------------------------CHHHHHHHHHHHcCCCeEEEEecCcccCCC
Confidence 9764 33 57899999954332111 1268899999999999999885421
Q ss_pred -----------------CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 -----------------NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 -----------------~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
.....+.+++.++||..+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 148 ATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp SSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred ChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 123678899999999987654
No 57
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.60 E-value=2.6e-15 Score=148.76 Aligned_cols=132 Identities=11% Similarity=0.155 Sum_probs=98.3
Q ss_pred HHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHh--cCCCcEEEEEeCCHHHHHHHHHHHHhh---cccCC--------
Q psy2395 385 LLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIY--SKNKIEIIATDISKFALKIAKKNAKKK---LTKYN-------- 450 (570)
Q Consensus 385 ~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~--~~~~~~V~gvDis~~al~~A~~n~~~~---~~~~~-------- 450 (570)
.+++.++.... .++.+|||+|||||.+++.++.. .+ ..+|+|+|+|+.+++.|++|+..+ +....
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 56666665433 25679999999999999999987 43 479999999999999999998753 21000
Q ss_pred ---------------CCEE-------------EEEccccccccc----CCCceeEEEECCCCCCCCCcccCCCCcccccc
Q psy2395 451 ---------------IPIK-------------FIKSNWYNNLQN----YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPI 498 (570)
Q Consensus 451 ---------------~~v~-------------~~~~D~~~~l~~----~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~ 498 (570)
.+++ |.++|+++.... ...+||+|++||||+.......
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~---------- 186 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG---------- 186 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS----------
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc----------
Confidence 0055 999999875431 2348999999999985432210
Q ss_pred ccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 499 NALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 499 ~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
.++.+.+..+++.+.++|+|||++++ ++.
T Consensus 187 ------~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~ 215 (250)
T 1o9g_A 187 ------QVPGQPVAGLLRSLASALPAHAVIAV-TDR 215 (250)
T ss_dssp ------CCCHHHHHHHHHHHHHHSCTTCEEEE-EES
T ss_pred ------cccccHHHHHHHHHHHhcCCCcEEEE-eCc
Confidence 24667889999999999999999998 443
No 58
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.60 E-value=1.7e-14 Score=141.78 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=104.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.+++.+|||+|||+|++++.+++.++ ..+|+|+|+|+.+++.|++|+..++ ...+++++++|+++.+.. ..+||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~~-~~~~D~I 94 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIEK-KDAIDTI 94 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccCc-cccccEE
Confidence 45678999999999999999998875 5789999999999999999999864 344699999999887653 2369998
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~ 553 (570)
++. + -|-+.+..++..+...|+++|+|++. |....+.++++|.++||..+.
T Consensus 95 via--------------------------g-mGg~lI~~IL~~~~~~L~~~~~lIlq-~~~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 95 VIA--------------------------G-MGGTLIRTILEEGAAKLAGVTKLILQ-PNIAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp EEE--------------------------E-ECHHHHHHHHHHTGGGGTTCCEEEEE-ESSCHHHHHHHHHHHTEEEEE
T ss_pred EEe--------------------------C-CchHHHHHHHHHHHHHhCCCCEEEEE-cCCChHHHHHHHHHCCCEEEE
Confidence 861 1 13367899999999999999998765 456789999999999998754
No 59
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=2.6e-14 Score=140.76 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=99.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc--cCCCceeEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--NYKKLFNII 474 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--~~~~~fD~I 474 (570)
++.+|||+|||+|.+++.++...+ +.+|+|+|+|+.+++.|++|+..++. .+++++++|+.+... ...++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhcccccccCCccEE
Confidence 567999999999999999997654 68999999999999999999987532 259999999965321 114689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHH---HHHHHHHHCCCee
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSN---LVRKLLFKYGFSD 551 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~l~~ll~~~Gf~~ 551 (570)
+++.. ..+..+++.+.++|+|||++++..+....+ .+.+.+...||..
T Consensus 146 ~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 146 TARAV-----------------------------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEECC-----------------------------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEE
T ss_pred EEecc-----------------------------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeE
Confidence 99541 124789999999999999999887765544 3556778899987
Q ss_pred EEEE
Q psy2395 552 IKSW 555 (570)
Q Consensus 552 i~~~ 555 (570)
+...
T Consensus 197 ~~~~ 200 (240)
T 1xdz_A 197 ENIH 200 (240)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6654
No 60
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.59 E-value=5.7e-15 Score=144.02 Aligned_cols=138 Identities=20% Similarity=0.200 Sum_probs=110.7
Q ss_pred ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEE
Q psy2395 376 VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKF 455 (570)
Q Consensus 376 ~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~ 455 (570)
..+|+|.++.+++.++.....++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++.. ++++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~--------~~~~ 95 (226)
T 3m33_A 27 RVLSGPDPELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANAP--------HADV 95 (226)
T ss_dssp CEESSSCTTHHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHCT--------TSEE
T ss_pred cccCCCCHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhCC--------CceE
Confidence 3457787888888777655567889999999999999999976 3699999999999999998821 4899
Q ss_pred EEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 456 IKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 456 ~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
+++|+.+.++.. +++||+|++++.. ..+++.+.+.|+|||+++...+.
T Consensus 96 ~~~d~~~~~~~~~~~~fD~v~~~~~~-------------------------------~~~l~~~~~~LkpgG~l~~~~~~ 144 (226)
T 3m33_A 96 YEWNGKGELPAGLGAPFGLIVSRRGP-------------------------------TSVILRLPELAAPDAHFLYVGPR 144 (226)
T ss_dssp EECCSCSSCCTTCCCCEEEEEEESCC-------------------------------SGGGGGHHHHEEEEEEEEEEESS
T ss_pred EEcchhhccCCcCCCCEEEEEeCCCH-------------------------------HHHHHHHHHHcCCCcEEEEeCCc
Confidence 999997666654 5799999997311 24456778899999999955566
Q ss_pred CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 ~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
.....+.+.+.++||..+.+.
T Consensus 145 ~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 145 LNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp SCCTHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEE
Confidence 677789999999999987654
No 61
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=2.9e-14 Score=143.23 Aligned_cols=147 Identities=14% Similarity=0.209 Sum_probs=110.5
Q ss_pred Ceeeeec--CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 367 GLVLNIT--SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 367 ~~~~~v~--~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
|..|.++ ..+|.|+-.++.. .+.. ...++.+|||+|||+|.+++.+|+.+ .++|+|+|+||.+++.+++|++.
T Consensus 96 G~~~~~D~~k~~f~~~~~~er~--ri~~-~~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~ 170 (278)
T 3k6r_A 96 GIKYKLDVAKIMFSPANVKERV--RMAK-VAKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHL 170 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHH--HHHH-HCCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHH
T ss_pred CEEEEEeccceEEcCCcHHHHH--HHHH-hcCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHH
Confidence 4455444 5678888666542 1222 24578899999999999999999876 46999999999999999999998
Q ss_pred hcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc
Q psy2395 445 KLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK 524 (570)
Q Consensus 445 ~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp 524 (570)
|+ ...+++++++|+.+... .+.||.|++|||+.. ..++..+.++|++
T Consensus 171 N~--v~~~v~~~~~D~~~~~~--~~~~D~Vi~~~p~~~-----------------------------~~~l~~a~~~lk~ 217 (278)
T 3k6r_A 171 NK--VEDRMSAYNMDNRDFPG--ENIADRILMGYVVRT-----------------------------HEFIPKALSIAKD 217 (278)
T ss_dssp TT--CTTTEEEECSCTTTCCC--CSCEEEEEECCCSSG-----------------------------GGGHHHHHHHEEE
T ss_pred cC--CCCcEEEEeCcHHHhcc--ccCCCEEEECCCCcH-----------------------------HHHHHHHHHHcCC
Confidence 74 34579999999977544 378999999998642 2345566679999
Q ss_pred CeEEEEE-E-c-----CCCHHHHHHHHHHCCCee
Q psy2395 525 NGLLLIE-H-G-----YNQSNLVRKLLFKYGFSD 551 (570)
Q Consensus 525 gG~l~~~-~-~-----~~~~~~l~~ll~~~Gf~~ 551 (570)
||++.+. + + ....+.+.+++...|+..
T Consensus 218 gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 218 GAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp EEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 9998652 2 1 233567788888899874
No 62
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=2e-14 Score=133.93 Aligned_cols=143 Identities=16% Similarity=0.115 Sum_probs=106.7
Q ss_pred CccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEE
Q psy2395 375 DVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIK 454 (570)
Q Consensus 375 ~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~ 454 (570)
+.++++.....+++.+ ...++.+|||+|||+|.++..++...+ +.+|+|+|+|+.+++.|++|+..++ ...++
T Consensus 6 g~~t~~~~~~~~~~~~---~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~- 78 (178)
T 3hm2_A 6 GQLTKQHVRALAISAL---APKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLG--VSDRI- 78 (178)
T ss_dssp CCSHHHHHHHHHHHHH---CCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTT--CTTSE-
T ss_pred CcccHHHHHHHHHHHh---cccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhC--CCCCE-
Confidence 4444444444444333 234667999999999999999998764 6899999999999999999998642 22368
Q ss_pred EEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 455 FIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 455 ~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
++++|+.+.++...++||+|+++.++.. ..+++.+.+.|+|||++++....
T Consensus 79 ~~~~d~~~~~~~~~~~~D~i~~~~~~~~-----------------------------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 79 AVQQGAPRAFDDVPDNPDVIFIGGGLTA-----------------------------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp EEECCTTGGGGGCCSCCSEEEECC-TTC-----------------------------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred EEecchHhhhhccCCCCCEEEECCcccH-----------------------------HHHHHHHHHhcCCCCEEEEEeec
Confidence 8889987766654478999999876531 35677888899999999886643
Q ss_pred -CCHHHHHHHHHHCCCeeEE
Q psy2395 535 -NQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 535 -~~~~~l~~ll~~~Gf~~i~ 553 (570)
.....+..++.+.|+....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 130 VESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp HHHHHHHHHHHHHHCCEEEE
T ss_pred cccHHHHHHHHHHcCCeeEE
Confidence 4566778888888887654
No 63
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.58 E-value=1.1e-14 Score=164.57 Aligned_cols=138 Identities=15% Similarity=0.211 Sum_probs=106.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||||.+++.++..+ ..+|+++|+|+.+++.|++|+..|+.. ..+++++++|+++.++...++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~-~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCC-STTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEEecCHHHHHHhcCCCccEEEE
Confidence 57799999999999999999754 358999999999999999999986421 136999999998866554578999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCee
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSD 551 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~ 551 (570)
||||+...... ....++...+..++..+.++|+|||++++.++........+.+.+.||..
T Consensus 616 DPP~f~~~~~~--------------~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~ 676 (703)
T 3v97_A 616 DPPTFSNSKRM--------------EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 676 (703)
T ss_dssp CCCSBC---------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEE
T ss_pred CCccccCCccc--------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCce
Confidence 99987543210 00113346789999999999999999999887744444467788888863
No 64
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.58 E-value=4.7e-14 Score=144.85 Aligned_cols=150 Identities=15% Similarity=0.127 Sum_probs=105.8
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|..+..++...++..+|+|+|+|+.+++.+++|+..++. .++.++++|+.+... ..++||+|
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~-~~~~fD~I 191 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGE-LNVEFDKI 191 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGG-GCCCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccc-ccccCCEE
Confidence 35678999999999999999998765457999999999999999999987532 259999999966433 34689999
Q ss_pred EECCCCCCCCCcccCCCCc-cccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----CCHHHHHHHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDL-RFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----NQSNLVRKLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~-~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~l~~ll~~~Gf 549 (570)
++|||+.........+... .+.+. ...........+++.+.++|||||++++.+.. .+...+..++++.||
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~----~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~ 267 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMD----DIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDV 267 (315)
T ss_dssp EEECCTTSTTTCC--------CCHH----HHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSE
T ss_pred EEeCCCCCcccccCChhHhhcCCHH----HHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCC
Confidence 9999976443221111110 01110 00111234578999999999999999885532 345566778888887
Q ss_pred eeE
Q psy2395 550 SDI 552 (570)
Q Consensus 550 ~~i 552 (570)
..+
T Consensus 268 ~~~ 270 (315)
T 1ixk_A 268 ELL 270 (315)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 65
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=3.8e-14 Score=137.66 Aligned_cols=141 Identities=11% Similarity=0.092 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..++.. .++.+|||+|||+|..++.+++..+++++|+|+|+|+.+++.|++|+..++ ...+++++++|+
T Consensus 44 ~~~~~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 119 (221)
T 3u81_A 44 DAKGQIMDAVIRE--YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGAS 119 (221)
T ss_dssp HHHHHHHHHHHHH--HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHh--cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCH
Confidence 4555555555443 256799999999999999999876546899999999999999999998753 234699999998
Q ss_pred ccccccCC-----CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cC
Q psy2395 461 YNNLQNYK-----KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GY 534 (570)
Q Consensus 461 ~~~l~~~~-----~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~ 534 (570)
.+.++... ++||+|+++.+.. .......++..+ ++|+|||++++.. ..
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKD-------------------------RYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGG-------------------------GHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcc-------------------------cchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 76555433 5899999975421 011234566666 9999999998743 23
Q ss_pred CCHHHHHHHHHHCC-Cee
Q psy2395 535 NQSNLVRKLLFKYG-FSD 551 (570)
Q Consensus 535 ~~~~~l~~ll~~~G-f~~ 551 (570)
.....+.+++.+.. |..
T Consensus 174 ~~~~~~~~~l~~~~~~~~ 191 (221)
T 3u81_A 174 PGTPDFLAYVRGSSSFEC 191 (221)
T ss_dssp CCCHHHHHHHHHCTTEEE
T ss_pred cchHHHHHHHhhCCCceE
Confidence 33456677777654 443
No 66
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.58 E-value=1.9e-14 Score=151.32 Aligned_cols=145 Identities=21% Similarity=0.101 Sum_probs=108.7
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.+++.++..++ ..+|+|+|+|+.+++.|++|+..++ ...++++.++|+.+. +...++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~~-~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQL-SQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGGG-GGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhhC-CcccCCcCEE
Confidence 34678999999999999999998764 3489999999999999999998753 223699999999763 3334789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~ 554 (570)
++||||...... ...-.+.|..+++.+.++| +|.+++.++ ....+.+.+.+.||...+.
T Consensus 291 i~npPyg~r~~~-----------------~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--~~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 291 ISNLPYGLKIGK-----------------KSMIPDLYMKFFNELAKVL--EKRGVFITT--EKKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp EEECCCC-----------------------CCHHHHHHHHHHHHHHHE--EEEEEEEES--CHHHHHHHHHHTTEEEEEE
T ss_pred EECCCCCcccCc-----------------chhHHHHHHHHHHHHHHHc--CCeEEEEEC--CHHHHHHHHHHcCCEEEEE
Confidence 999999743210 0011245788999999988 666666554 4566778888999998887
Q ss_pred EecCCCCceE
Q psy2395 555 WRDLSGIERV 564 (570)
Q Consensus 555 ~~D~~g~~R~ 564 (570)
.+-..|.-.+
T Consensus 350 ~~~~nG~l~~ 359 (373)
T 3tm4_A 350 RVIGHGGLMV 359 (373)
T ss_dssp EEEEETTEEE
T ss_pred EEEEcCCEEE
Confidence 7766665543
No 67
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.58 E-value=6.1e-14 Score=148.59 Aligned_cols=162 Identities=18% Similarity=0.268 Sum_probs=114.4
Q ss_pred cCeeeeecCC------ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 366 YGLVLNITSD------VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 366 ~~~~~~v~~~------~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.|..|.+++. .|....+...++..+ .++.+|||+|||+|.+++.++..+ ..+|+|+|+|+.+++.|+
T Consensus 188 ~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~-----~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~ 260 (396)
T 3c0k_A 188 HGMKLLVDIQHGHKTGYYLDQRDSRLATRRY-----VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIAR 260 (396)
T ss_dssp TTEEEEECTTTSSTTSSCGGGHHHHHHHHHH-----CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHH
T ss_pred CCEEEEEeccccccCCcCcCHHHHHHHHHHh-----hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHH
Confidence 5788888874 443333333333222 357799999999999999999864 369999999999999999
Q ss_pred HHHHhhcccCCCCEEEEEcccccccccC---CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 440 KNAKKKLTKYNIPIKFIKSNWYNNLQNY---KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 440 ~n~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
+|+..|+.. ..+++|+++|+.+.+... ..+||+|++||||+...... -.+....+..++.
T Consensus 261 ~n~~~ngl~-~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~----------------~~~~~~~~~~~l~ 323 (396)
T 3c0k_A 261 QNVELNKLD-LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQ----------------LMGACRGYKDINM 323 (396)
T ss_dssp HHHHHTTCC-GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSS----------------SSCCCTHHHHHHH
T ss_pred HHHHHcCCC-ccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhH----------------HHHHHHHHHHHHH
Confidence 999985320 126999999997754421 36899999999987543210 0122345678999
Q ss_pred HHhhccccCeEEEEEEcCCC------HHHHHHHHHHCCCee
Q psy2395 517 NASKYLVKNGLLLIEHGYNQ------SNLVRKLLFKYGFSD 551 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~~~------~~~l~~ll~~~Gf~~ 551 (570)
.+.+.|+|||++++.+.... ...+.+.+.+.|+..
T Consensus 324 ~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 324 LAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp HHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 99999999999998765432 223445666777543
No 68
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.58 E-value=5e-14 Score=139.41 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=108.9
Q ss_pred HHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccc
Q psy2395 384 ELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWY 461 (570)
Q Consensus 384 ~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~ 461 (570)
......++..+. .++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|++++..++ ...+++++++|+.
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKAN--CADRVKGITGSMD 106 (257)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChh
Confidence 344444544432 4667999999999999999999874 499999999999999999998753 3345999999995
Q ss_pred cccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-------
Q psy2395 462 NNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------- 534 (570)
Q Consensus 462 ~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------- 534 (570)
+ ++..+++||+|+++..+... ....+++.+.++|+|||++++..+.
T Consensus 107 ~-~~~~~~~fD~v~~~~~l~~~--------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 159 (257)
T 3f4k_A 107 N-LPFQNEELDLIWSEGAIYNI--------------------------GFERGMNEWSKYLKKGGFIAVSEASWFTSERP 159 (257)
T ss_dssp S-CSSCTTCEEEEEEESCSCCC--------------------------CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCC
T ss_pred h-CCCCCCCEEEEEecChHhhc--------------------------CHHHHHHHHHHHcCCCcEEEEEEeeccCCCCh
Confidence 4 44445799999997654321 1367899999999999999886421
Q ss_pred --------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 --------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 --------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.+++.++||..+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 160 AEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFI 195 (257)
T ss_dssp HHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 1346788999999999987653
No 69
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.57 E-value=3.4e-14 Score=152.23 Aligned_cols=148 Identities=18% Similarity=0.178 Sum_probs=109.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|..++.+|...+...+|+|+|+|+.+++.+++|+.+++. .++.++++|+.+......++||+|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhccccCCEE
Confidence 35678999999999999999998765457999999999999999999998642 259999999866433234789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCCh----HHHHHHHHHHhhccccCeEEEEEEcC----CCHHHHHHHHHH
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGL----SSIKEIVKNASKYLVKNGLLLIEHGY----NQSNLVRKLLFK 546 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl----~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~l~~ll~~ 546 (570)
++|||+..... ++..|........+.+ .....++..+.++|+|||++++.+.. .+...+..++.+
T Consensus 180 l~DaPCSg~G~-------~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~ 252 (456)
T 3m4x_A 180 VVDAPCSGEGM-------FRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVEN 252 (456)
T ss_dssp EEECCCCCGGG-------TTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred EECCCCCCccc-------cccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHh
Confidence 99999865432 2223333222222222 34458999999999999999886532 456677888888
Q ss_pred CCCeeE
Q psy2395 547 YGFSDI 552 (570)
Q Consensus 547 ~Gf~~i 552 (570)
++|..+
T Consensus 253 ~~~~l~ 258 (456)
T 3m4x_A 253 YPVTIE 258 (456)
T ss_dssp SSEEEE
T ss_pred CCCEEE
Confidence 876543
No 70
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.57 E-value=4.2e-14 Score=135.50 Aligned_cols=142 Identities=15% Similarity=0.209 Sum_probs=102.7
Q ss_pred cccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE
Q psy2395 377 LIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI 456 (570)
Q Consensus 377 ~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~ 456 (570)
..|......++..+......++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++|+..+ +.+++++
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~ 102 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEF----KGKFKVF 102 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGG----TTSEEEE
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHc----CCCEEEE
Confidence 3455556666655543323467899999999999999999874 358999999999999999999864 3379999
Q ss_pred EcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cCC
Q psy2395 457 KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GYN 535 (570)
Q Consensus 457 ~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~~ 535 (570)
++|+.+ ++ .+||+|++||||+.... + ....+++.+.+.| ||.+++.+ +..
T Consensus 103 ~~d~~~-~~---~~~D~v~~~~p~~~~~~---------------------~--~~~~~l~~~~~~l--~~~~~~~~~~~~ 153 (207)
T 1wy7_A 103 IGDVSE-FN---SRVDIVIMNPPFGSQRK---------------------H--ADRPFLLKAFEIS--DVVYSIHLAKPE 153 (207)
T ss_dssp ESCGGG-CC---CCCSEEEECCCCSSSST---------------------T--TTHHHHHHHHHHC--SEEEEEEECCHH
T ss_pred ECchHH-cC---CCCCEEEEcCCCccccC---------------------C--chHHHHHHHHHhc--CcEEEEEeCCcC
Confidence 999966 32 58999999999975321 1 1145677777777 55443333 444
Q ss_pred CHHHHHHHHHHCCCeeEE
Q psy2395 536 QSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 536 ~~~~l~~ll~~~Gf~~i~ 553 (570)
..+.+.+.+.+.||....
T Consensus 154 ~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 154 VRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp HHHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHCCCeEEE
Confidence 556677888899987643
No 71
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.57 E-value=3.5e-14 Score=141.72 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=107.1
Q ss_pred HHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 387 VDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 387 ~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
...++..+. .++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++++...+ ...+++++++|+.+ +
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~ 108 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGSMDD-L 108 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTS-C
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcChhh-C
Confidence 344444433 567899999999999999999873 5799999999999999999988642 23469999999965 4
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------- 534 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------- 534 (570)
+...++||+|+++.++... ....+++.+.++|+|||++++....
T Consensus 109 ~~~~~~fD~i~~~~~~~~~--------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 162 (267)
T 3kkz_A 109 PFRNEELDLIWSEGAIYNI--------------------------GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEI 162 (267)
T ss_dssp CCCTTCEEEEEESSCGGGT--------------------------CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHH
T ss_pred CCCCCCEEEEEEcCCceec--------------------------CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHH
Confidence 4335789999998764321 1367899999999999999885421
Q ss_pred -----------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 -----------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 -----------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.+++.++||..+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 163 NDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp HHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 1245788899999999987654
No 72
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=3.1e-14 Score=143.21 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=101.9
Q ss_pred cCeeeeecCCc--cccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 366 YGLVLNITSDV--LIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 366 ~~~~~~v~~~~--~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
.|..|.++++. +.|+..++.+.. +. ...++.+|||+|||+|.+++.+++.++ ..+|+|+|+|+.+++.|++|+.
T Consensus 89 ~g~~f~~~~~~~f~~~~~~~e~~~~--~~-~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~ 164 (272)
T 3a27_A 89 YGCLFKLDVAKIMWSQGNIEERKRM--AF-ISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIK 164 (272)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHH--HT-SCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEEechhEEECCCchHHHHHH--HH-hcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHH
Confidence 57888888877 566666665532 22 235678999999999999999998864 5799999999999999999999
Q ss_pred hhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 444 KKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 444 ~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
.|+. .++.++++|+.+. +. .++||+|++|||+. +..++..+.+.|+
T Consensus 165 ~n~l---~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~~-----------------------------~~~~l~~~~~~Lk 210 (272)
T 3a27_A 165 LNKL---NNVIPILADNRDV-EL-KDVADRVIMGYVHK-----------------------------THKFLDKTFEFLK 210 (272)
T ss_dssp HTTC---SSEEEEESCGGGC-CC-TTCEEEEEECCCSS-----------------------------GGGGHHHHHHHEE
T ss_pred HcCC---CCEEEEECChHHc-Cc-cCCceEEEECCccc-----------------------------HHHHHHHHHHHcC
Confidence 8532 2588999999775 43 46899999999961 1345667778999
Q ss_pred cCeEEEEEEc
Q psy2395 524 KNGLLLIEHG 533 (570)
Q Consensus 524 pgG~l~~~~~ 533 (570)
|||++++.+.
T Consensus 211 pgG~l~~s~~ 220 (272)
T 3a27_A 211 DRGVIHYHET 220 (272)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEEEc
Confidence 9999988553
No 73
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.57 E-value=2.8e-14 Score=147.89 Aligned_cols=159 Identities=22% Similarity=0.176 Sum_probs=117.7
Q ss_pred cCeeeeecCC--ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 366 YGLVLNITSD--VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 366 ~~~~~~v~~~--~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
.|..|.+++. .|.++..++.+ .+... ..++.+|||+|||+|.+++. ++ . ..+|+|+|+|+.+++.|++|+.
T Consensus 165 ~g~~f~~d~~~~~~~~~~~~er~--~i~~~-~~~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~ 237 (336)
T 2yx1_A 165 NGYRLWVDIAKVYFSPRLGGERA--RIMKK-VSLNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIK 237 (336)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHH--HHHHH-CCTTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEehHHhccCCccHHHHH--HHHHh-cCCCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHH
Confidence 4677777765 45555555554 33333 24678999999999999999 86 2 5799999999999999999999
Q ss_pred hhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 444 KKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 444 ~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
.|+ ...+++++++|+.+.+ ++||+|++|||+.. ..++..+.++|+
T Consensus 238 ~n~--l~~~v~~~~~D~~~~~----~~fD~Vi~dpP~~~-----------------------------~~~l~~~~~~L~ 282 (336)
T 2yx1_A 238 LNK--LEHKIIPILSDVREVD----VKGNRVIMNLPKFA-----------------------------HKFIDKALDIVE 282 (336)
T ss_dssp HTT--CTTTEEEEESCGGGCC----CCEEEEEECCTTTG-----------------------------GGGHHHHHHHEE
T ss_pred HcC--CCCcEEEEECChHHhc----CCCcEEEECCcHhH-----------------------------HHHHHHHHHHcC
Confidence 863 2236999999997754 68999999999752 245667778999
Q ss_pred cCeEEEEE-EcCCCHHHHHHHHHHC-CCee--EEEEecCCCCceEEEE
Q psy2395 524 KNGLLLIE-HGYNQSNLVRKLLFKY-GFSD--IKSWRDLSGIERVTQG 567 (570)
Q Consensus 524 pgG~l~~~-~~~~~~~~l~~ll~~~-Gf~~--i~~~~D~~g~~R~~~~ 567 (570)
|||++++. +... ...+.+.+.+. ||.. +...++++...+.++.
T Consensus 283 ~gG~l~~~~~~~~-~~~~~~~l~~~~~~~i~~~~~v~~~~p~~~~~~~ 329 (336)
T 2yx1_A 283 EGGVIHYYTIGKD-FDKAIKLFEKKCDCEVLEKRIVKSYAPREYILAL 329 (336)
T ss_dssp EEEEEEEEEEESS-SHHHHHHHHHHSEEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEEeecC-chHHHHHHHHhcCCcEEEEEEEeccCCCCCEEEE
Confidence 99998774 4444 56667777776 7764 4566777776665543
No 74
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.57 E-value=5.2e-14 Score=141.86 Aligned_cols=137 Identities=18% Similarity=0.189 Sum_probs=105.5
Q ss_pred HHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCC
Q psy2395 390 IVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKK 469 (570)
Q Consensus 390 ~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 469 (570)
++..+..++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...+ ...+++++++|+.+.....++
T Consensus 61 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 61 VLAEMGPQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHTCSSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGCSS
T ss_pred HHHhcCCCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhcCC
Confidence 33434455779999999999999999976 3699999999999999999998642 224699999999765434458
Q ss_pred ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------
Q psy2395 470 LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------- 534 (570)
Q Consensus 470 ~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------- 534 (570)
+||+|+++..+...+ ....+++.+.++|+|||++++....
T Consensus 136 ~fD~v~~~~~l~~~~-------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 190 (285)
T 4htf_A 136 PVDLILFHAVLEWVA-------------------------DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFD 190 (285)
T ss_dssp CEEEEEEESCGGGCS-------------------------CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHH
T ss_pred CceEEEECchhhccc-------------------------CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHH
Confidence 999999975432111 2367899999999999999886531
Q ss_pred -------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 -------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 -------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
...+.+.+++.++||.++.+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 191 YVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp HHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeee
Confidence 1247899999999999886653
No 75
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=6.3e-14 Score=136.77 Aligned_cols=134 Identities=17% Similarity=0.238 Sum_probs=104.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++...+ +.+|+|+|+|+.+++.|++++.. .. ++.++++|+.+.... ++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~~d~~~~~~~--~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRG----NL-KVKYIEADYSKYDFE--EKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCS----CT-TEEEEESCTTTCCCC--SCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhcc----CC-CEEEEeCchhccCCC--CCceEEE
Confidence 4678999999999999999999875 58999999999999999999864 22 799999999664322 7899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++.++...+ ......+++++.+.|+|||++++....
T Consensus 115 ~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (234)
T 3dtn_A 115 SALSIHHLE-----------------------DEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVEN 171 (234)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHT
T ss_pred EeCccccCC-----------------------HHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHh
Confidence 976543211 012346899999999999999885411
Q ss_pred --------------------CCHHHHHHHHHHCCCeeEEEEecCCC
Q psy2395 535 --------------------NQSNLVRKLLFKYGFSDIKSWRDLSG 560 (570)
Q Consensus 535 --------------------~~~~~l~~ll~~~Gf~~i~~~~D~~g 560 (570)
...+.+.++|+++||..++++....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 217 (234)
T 3dtn_A 172 SGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQ 217 (234)
T ss_dssp SSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred cCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecc
Confidence 12356677999999999988765444
No 76
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.56 E-value=4.5e-14 Score=149.10 Aligned_cols=158 Identities=16% Similarity=0.214 Sum_probs=109.4
Q ss_pred cCeeeeecCC------ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 366 YGLVLNITSD------VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 366 ~~~~~~v~~~------~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.|..|.++.. .|.....+..++.. ...++.+|||+|||||.+++.++..+ +.|+|+|+|+.+++.|+
T Consensus 181 ~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~----~~~~g~~VLDlg~GtG~~sl~~a~~g---a~V~avDis~~al~~a~ 253 (393)
T 4dmg_A 181 DGLRFPIPLALAQKTGYYLDQRENRRLFEA----MVRPGERVLDVYSYVGGFALRAARKG---AYALAVDKDLEALGVLD 253 (393)
T ss_dssp TTEEEEEETTTCCTTSSCGGGHHHHHHHHT----TCCTTCEEEEESCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHH
T ss_pred CCEEEEEechhccccCcCCCHHHHHHHHHH----HhcCCCeEEEcccchhHHHHHHHHcC---CeEEEEECCHHHHHHHH
Confidence 3666666643 45444444433322 23457899999999999999999864 45999999999999999
Q ss_pred HHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHh
Q psy2395 440 KNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNAS 519 (570)
Q Consensus 440 ~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~ 519 (570)
+|+..|+ ....+.++|+++.+....+.||+|++|||++..... ...+....+..++..+.
T Consensus 254 ~n~~~ng----~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~----------------~~~~~~~~~~~ll~~a~ 313 (393)
T 4dmg_A 254 QAALRLG----LRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPE----------------ELPAMKRHLVDLVREAL 313 (393)
T ss_dssp HHHHHHT----CCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGG----------------GHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC----CCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHH----------------HHHHHHHHHHHHHHHHH
Confidence 9999864 234577999987664434459999999998754311 00123456788999999
Q ss_pred hccccCeEEEEEEcCC--CHH----HHHHHHHHCCCe
Q psy2395 520 KYLVKNGLLLIEHGYN--QSN----LVRKLLFKYGFS 550 (570)
Q Consensus 520 ~~LkpgG~l~~~~~~~--~~~----~l~~ll~~~Gf~ 550 (570)
++|+|||++++..... ..+ .+.+.+.+.|..
T Consensus 314 ~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 314 RLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred HhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 9999999998654332 233 344455555644
No 77
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=1e-13 Score=133.22 Aligned_cols=124 Identities=12% Similarity=0.103 Sum_probs=100.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+.+.. ..+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~~-~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYG--LSPRMRAVQGTAPAALAD-LPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCTTGGGTT-SCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC--CCCCEEEEeCchhhhccc-CCCCCEE
Confidence 356789999999999999999976 3799999999999999999998753 222699999999775543 2579999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc-CCCHHHHHHHHHHCCCeeEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG-YNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~l~~ll~~~Gf~~i~ 553 (570)
++++.. ... +++.+.+.|+|||++++... ......+.+++++.||....
T Consensus 127 ~~~~~~-----------------------------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 127 FIGGGG-----------------------------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp EECSCC-----------------------------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred EECCcc-----------------------------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 997522 124 88899999999999998764 35677788899999987655
Q ss_pred E
Q psy2395 554 S 554 (570)
Q Consensus 554 ~ 554 (570)
+
T Consensus 177 i 177 (204)
T 3njr_A 177 I 177 (204)
T ss_dssp E
T ss_pred E
Confidence 3
No 78
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.56 E-value=4e-14 Score=143.83 Aligned_cols=190 Identities=15% Similarity=0.214 Sum_probs=123.6
Q ss_pred CceeecCc-ccccCeeeeecCCccccchh----HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEe
Q psy2395 355 PIAYIIGK-KEFYGLVLNITSDVLIPRPE----TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATD 429 (570)
Q Consensus 355 p~~~i~g~-~~f~~~~~~v~~~~~~pr~~----t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvD 429 (570)
|.|+|... ..++|..+.++..+.++.++ .+.++...+.. .+++.+|||+|||+|.++..+++..+ ..+|+++|
T Consensus 37 ~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~-~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VD 114 (294)
T 3adn_A 37 DHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLA-HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVE 114 (294)
T ss_dssp --CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHH-STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEEC
T ss_pred CCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhc-CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEE
Confidence 44555443 23567788888888888766 44444433322 24578999999999999999997643 57999999
Q ss_pred CCHHHHHHHHHHHHhhccc--CCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCC
Q psy2395 430 ISKFALKIAKKNAKKKLTK--YNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNG 507 (570)
Q Consensus 430 is~~al~~A~~n~~~~~~~--~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~g 507 (570)
+|+.+++.|++++...... .+.+++++.+|+.+.+....++||+|++|+|..... ...+
T Consensus 115 id~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~-------------~~~l------ 175 (294)
T 3adn_A 115 IDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGP-------------GESL------ 175 (294)
T ss_dssp SCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC-----------------------------
T ss_pred CCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCc-------------chhc------
Confidence 9999999999998753110 234799999999887655457899999987631100 0000
Q ss_pred hHHHHHHHHHHhhccccCeEEEEEEc--CCCHH---HHHHHHHHCCCeeEEEEe----cC-CCCceEEEEE
Q psy2395 508 LSSIKEIVKNASKYLVKNGLLLIEHG--YNQSN---LVRKLLFKYGFSDIKSWR----DL-SGIERVTQGK 568 (570)
Q Consensus 508 l~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~---~l~~ll~~~Gf~~i~~~~----D~-~g~~R~~~~~ 568 (570)
+...+++.+.+.|+|||++++..+ ..+.+ .+.+.+++. |..+..+. .+ .|...+++|.
T Consensus 176 --~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~~f~~as 243 (294)
T 3adn_A 176 --FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp --CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEEEEEEECTTSSSSEEEEEEEE
T ss_pred --cHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH-CCCeEEEEEEecccCCCceEEEEEe
Confidence 126788899999999999998653 33333 344445444 66665443 33 3555666665
No 79
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.55 E-value=3.2e-13 Score=144.59 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=125.1
Q ss_pred cchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEc
Q psy2395 379 PRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKS 458 (570)
Q Consensus 379 pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~ 458 (570)
+...+..++..+ . ..++.+|||+|||+|..+..++...+ +.+|+|+|+|+.+++.+++|+..+ +.++.++++
T Consensus 231 qd~~s~~~~~~l-~--~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~----g~~~~~~~~ 302 (429)
T 1sqg_A 231 QDASAQGCMTWL-A--PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRL----GMKATVKQG 302 (429)
T ss_dssp CCHHHHTHHHHH-C--CCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHT----TCCCEEEEC
T ss_pred eCHHHHHHHHHc-C--CCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHc----CCCeEEEeC
Confidence 334444444433 2 35678999999999999999998875 479999999999999999999874 445789999
Q ss_pred ccccccc-cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCCh----HHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 459 NWYNNLQ-NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGL----SSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 459 D~~~~l~-~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl----~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
|+.+... ...++||+|++|||+....... ..|...+......+ .....++..+.++|+|||++++.+.
T Consensus 303 D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~-------~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIR-------RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CTTCTHHHHTTCCEEEEEEECCCCCGGGTT-------TCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred chhhchhhcccCCCCEEEEeCCCCcccccC-------CCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9976432 2236899999999987543221 22222111111111 2346899999999999999988653
Q ss_pred C----CCHHHHHHHHHHC-CCee----------EEEEecCCCCceEEEEEe
Q psy2395 534 Y----NQSNLVRKLLFKY-GFSD----------IKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 534 ~----~~~~~l~~ll~~~-Gf~~----------i~~~~D~~g~~R~~~~~~ 569 (570)
. .+...+..++.++ +|.. ++++++..+.+-|+++++
T Consensus 376 s~~~~ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l 426 (429)
T 1sqg_A 376 SVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 (429)
T ss_dssp CCCGGGTHHHHHHHHHHCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEEE
T ss_pred CCChhhHHHHHHHHHHhCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEEE
Confidence 2 3456677778776 4654 457778888889998875
No 80
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=3.6e-14 Score=138.27 Aligned_cols=122 Identities=15% Similarity=0.217 Sum_probs=97.4
Q ss_pred cchhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC-CCEEEE
Q psy2395 379 PRPETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYN-IPIKFI 456 (570)
Q Consensus 379 pr~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~-~~v~~~ 456 (570)
+.|.+..++..+..... .++.+|||+|||+|..++.+++..+++++|+++|+|+.+++.|++|+..++ .. .+++++
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~ 114 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFL 114 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEE
Confidence 45667777777766432 224499999999999999999877657899999999999999999998753 33 469999
Q ss_pred EcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 457 KSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 457 ~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
++|+.+.++.. .++||+|+++++.. .+..+++.+.++|+|||++++
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~~~~----------------------------~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQVSPM----------------------------DLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECCCTT----------------------------THHHHHHHHHHHEEEEEEEEE
T ss_pred EcCHHHHHHHhcCCCcCeEEEcCcHH----------------------------HHHHHHHHHHHHcCCCcEEEE
Confidence 99998766544 57899999976421 346788889999999999987
No 81
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.55 E-value=2.3e-14 Score=139.30 Aligned_cols=136 Identities=10% Similarity=0.161 Sum_probs=100.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc--cCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--NYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--~~~~~fD~ 473 (570)
.++.+|||+|||+|.+++.+|+..+ +..|+|+|+|+.+++.|++|+..++ -.++.++++|+.+.++ ..+++||.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChhe
Confidence 3567999999999999999999876 5899999999999999999998742 2359999999977533 23579999
Q ss_pred EEEC--CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC-HHHHHHHHHHC-CC
Q psy2395 474 IVAN--PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ-SNLVRKLLFKY-GF 549 (570)
Q Consensus 474 Iv~N--PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~l~~ll~~~-Gf 549 (570)
|++| +||...... .. .+ ....+++.+.++|+|||++++.+.... .+.+.+.+... +|
T Consensus 109 v~~~~~~p~~~~~~~---------~r--r~--------~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~ 169 (218)
T 3dxy_A 109 VQLFFPDPWHKARHN---------KR--RI--------VQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGY 169 (218)
T ss_dssp EEEESCCCCCSGGGG---------GG--SS--------CSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTE
T ss_pred EEEeCCCCccchhhh---------hh--hh--------hhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCc
Confidence 9998 555432110 00 00 114688999999999999999886543 45566666654 56
Q ss_pred eeEEE
Q psy2395 550 SDIKS 554 (570)
Q Consensus 550 ~~i~~ 554 (570)
..+..
T Consensus 170 ~~~~~ 174 (218)
T 3dxy_A 170 KNLSE 174 (218)
T ss_dssp EECCT
T ss_pred ccccC
Confidence 65433
No 82
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.55 E-value=1.6e-13 Score=144.32 Aligned_cols=131 Identities=17% Similarity=0.223 Sum_probs=105.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc-CCCceeEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-YKKLFNIIV 475 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD~Iv 475 (570)
++.+|||+| |+|.+++.+++.++ ..+|+|+|+|+.+++.|++|+..++ .. +++++++|+.+.++. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g--~~-~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIG--YE-DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHT--CC-CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC--CC-CEEEEEChhhhhchhhccCCccEEE
Confidence 568999999 99999999998764 4799999999999999999998763 22 799999999875542 346899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCe-EEEEEEcC--CCH---HHHHHHHH-HCC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNG-LLLIEHGY--NQS---NLVRKLLF-KYG 548 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG-~l~~~~~~--~~~---~~l~~ll~-~~G 548 (570)
+||||... ....+++.+.+.|+||| .+++.+.. ... ..+.+.+. ..|
T Consensus 247 ~~~p~~~~--------------------------~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 300 (373)
T 2qm3_A 247 TDPPETLE--------------------------AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFN 300 (373)
T ss_dssp ECCCSSHH--------------------------HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSC
T ss_pred ECCCCchH--------------------------HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcC
Confidence 99998621 13788999999999999 45777765 555 67778887 889
Q ss_pred CeeEEEEecC
Q psy2395 549 FSDIKSWRDL 558 (570)
Q Consensus 549 f~~i~~~~D~ 558 (570)
|....+++++
T Consensus 301 ~~~~~~~~~~ 310 (373)
T 2qm3_A 301 VVITDIIRNF 310 (373)
T ss_dssp CEEEEEEEEE
T ss_pred cchhhhhhhh
Confidence 9877766653
No 83
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.54 E-value=1.3e-13 Score=135.02 Aligned_cols=131 Identities=14% Similarity=0.122 Sum_probs=104.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++... +.++.++++|+.+. +. .++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~-~~-~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQ----GLKPRLACQDISNL-NI-NRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHT----TCCCEEECCCGGGC-CC-SCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhc----CCCeEEEecccccC-Cc-cCCceEEEE
Confidence 67899999999999999998763 68999999999999999998763 33789999999663 32 278999999
Q ss_pred CC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 477 NP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 477 NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
+. .+.... .......+++.+.++|+|||++++.++.
T Consensus 108 ~~~~l~~~~----------------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (246)
T 1y8c_A 108 CLDSTNYII----------------------DSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVF 165 (246)
T ss_dssp CTTGGGGCC----------------------SHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEE
T ss_pred cCccccccC----------------------CHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEE
Confidence 76 432110 1134578999999999999999874321
Q ss_pred -------------------------------------CCHHHHHHHHHHCCCeeEEEEecC
Q psy2395 535 -------------------------------------NQSNLVRKLLFKYGFSDIKSWRDL 558 (570)
Q Consensus 535 -------------------------------------~~~~~l~~ll~~~Gf~~i~~~~D~ 558 (570)
...+++.++|+++||+.++++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~ 226 (246)
T 1y8c_A 166 YYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCY 226 (246)
T ss_dssp EEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESS
T ss_pred EEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEccc
Confidence 257889999999999999998775
No 84
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.54 E-value=9.3e-15 Score=155.70 Aligned_cols=160 Identities=17% Similarity=0.203 Sum_probs=113.4
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCE
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPI 453 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v 453 (570)
..+++|+...+.+++.+. ..++.+|||+|||+|.+++.+++......+|+|+|+++.+++.| .++
T Consensus 19 g~~~TP~~l~~~~~~~~~---~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~ 83 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAE---APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWA 83 (421)
T ss_dssp --CCCCHHHHHHHHHHCC---CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTE
T ss_pred ceEeCCHHHHHHHHHhhc---cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCC
Confidence 346778777777666542 13466999999999999999998752357999999999999877 248
Q ss_pred EEEEcccccccccCCCceeEEEECCCCCCCCCccc----CCCCc--cccccccccccCCChHHHHHHHHHHhhccccCeE
Q psy2395 454 KFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHL----NKGDL--RFEPINALTDYSNGLSSIKEIVKNASKYLVKNGL 527 (570)
Q Consensus 454 ~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~----~~~~~--~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~ 527 (570)
+++++|+.+... .++||+|++||||........ ..... .+++..+... ...+.+..+++.+.++|+|||.
T Consensus 84 ~~~~~D~~~~~~--~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 84 EGILADFLLWEP--GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWK--GKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp EEEESCGGGCCC--SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCC--TTCCHHHHHHHHHHHHEEEEEE
T ss_pred cEEeCChhhcCc--cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhccc--CCccHHHHHHHHHHHHhCCCCE
Confidence 899999976433 368999999999987553211 00111 1222112222 1245678999999999999999
Q ss_pred EEEEEcCC-----CHHHHHHHHHHCCCeeE
Q psy2395 528 LLIEHGYN-----QSNLVRKLLFKYGFSDI 552 (570)
Q Consensus 528 l~~~~~~~-----~~~~l~~ll~~~Gf~~i 552 (570)
++++++.. ....+++++.+.|+..+
T Consensus 160 ~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i 189 (421)
T 2ih2_A 160 LVFVVPATWLVLEDFALLREFLAREGKTSV 189 (421)
T ss_dssp EEEEEEGGGGTCGGGHHHHHHHHHHSEEEE
T ss_pred EEEEEChHHhcCccHHHHHHHHHhcCCeEE
Confidence 99988764 56788999888887433
No 85
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.54 E-value=1.4e-13 Score=133.34 Aligned_cols=117 Identities=21% Similarity=0.356 Sum_probs=91.6
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
.+.+.+.+.... +++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..+ +.+++++++|+.+
T Consensus 25 ~~~~~~~l~~~~-~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~ 96 (227)
T 1ve3_A 25 IETLEPLLMKYM-KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHSC-CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTS
T ss_pred HHHHHHHHHHhc-CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhc
Confidence 345555555543 347899999999999999999875 38999999999999999998863 4579999999966
Q ss_pred ccccCCCceeEEEECCC--CCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 463 NLQNYKKLFNIIVANPP--YIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPP--y~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
++...++||+|+++++ +.. ......+++.+.+.|+|||.+++..+
T Consensus 97 -~~~~~~~~D~v~~~~~~~~~~-------------------------~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 97 -LSFEDKTFDYVIFIDSIVHFE-------------------------PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp -CCSCTTCEEEEEEESCGGGCC-------------------------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCCCCcEEEEEEcCchHhCC-------------------------HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 3333468999999987 432 12347889999999999999987543
No 86
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.54 E-value=1.3e-13 Score=140.89 Aligned_cols=182 Identities=10% Similarity=0.078 Sum_probs=122.5
Q ss_pred ccCeeeeecCCccccch----hHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 365 FYGLVLNITSDVLIPRP----ETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 365 f~~~~~~v~~~~~~pr~----~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
+++..+.++........ ..+.+....+.. .+++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++
T Consensus 60 ~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~-~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~ 137 (304)
T 3bwc_A 60 PWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCS-HPKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQ 137 (304)
T ss_dssp SCCEEEEETTEEEEETTTHHHHHHHHHHHHHTT-SSSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHH
T ss_pred ccceEEEECCeeeeecccchHHHHHHhhhhhhc-CCCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHH
Confidence 45666666654333222 233444332221 24568999999999999999997643 5799999999999999999
Q ss_pred HHHhh-cccCCCCEEEEEccccccccc-CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHH
Q psy2395 441 NAKKK-LTKYNIPIKFIKSNWYNNLQN-YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNA 518 (570)
Q Consensus 441 n~~~~-~~~~~~~v~~~~~D~~~~l~~-~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~ 518 (570)
++... ......+++++.+|+.+.... ..++||+|++|+++...+ ...+ +-..+++.+
T Consensus 138 ~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~-------------~~~l--------~~~~~l~~~ 196 (304)
T 3bwc_A 138 HFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGP-------------ASKL--------FGEAFYKDV 196 (304)
T ss_dssp HCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC------------------------------CCHHHHHHH
T ss_pred HhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCcccc-------------chhh--------hHHHHHHHH
Confidence 87431 111245799999999775432 347899999998753111 0011 015788899
Q ss_pred hhccccCeEEEEEEcCC-----CHHHHHHHHHHCCCeeEEEEec----C-CCCceEEEEEe
Q psy2395 519 SKYLVKNGLLLIEHGYN-----QSNLVRKLLFKYGFSDIKSWRD----L-SGIERVTQGKI 569 (570)
Q Consensus 519 ~~~LkpgG~l~~~~~~~-----~~~~l~~ll~~~Gf~~i~~~~D----~-~g~~R~~~~~~ 569 (570)
.+.|+|||++++..+.. ....+.+.+++.||..+..+.. + .|...+++|..
T Consensus 197 ~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 197 LRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp HHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred HHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeC
Confidence 99999999999876542 3456778888899998877643 2 46666777653
No 87
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=7.2e-14 Score=138.41 Aligned_cols=128 Identities=18% Similarity=0.241 Sum_probs=104.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++...+..+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+.++ .++||+|+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~~D~v~ 167 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKDIYEGIE--EENVDHVI 167 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSCGGGCCC--CCSEEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECchhhccC--CCCcCEEE
Confidence 567899999999999999999883236899999999999999999998753 23359999999986544 36899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHHHHHHHHHHCC--CeeE
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSNLVRKLLFKYG--FSDI 552 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~l~~ll~~~G--f~~i 552 (570)
+|+|.. ..+++.+.+.|+|||.+++..+. .+...+.+.+.+.| |..+
T Consensus 168 ~~~~~~------------------------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 168 LDLPQP------------------------------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp ECSSCG------------------------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCC
T ss_pred ECCCCH------------------------------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcccc
Confidence 998732 34577888899999999987754 56778889999999 9887
Q ss_pred EEEec
Q psy2395 553 KSWRD 557 (570)
Q Consensus 553 ~~~~D 557 (570)
+++.-
T Consensus 218 ~~~e~ 222 (255)
T 3mb5_A 218 RTINV 222 (255)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 76643
No 88
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.54 E-value=8.9e-14 Score=130.56 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=105.3
Q ss_pred cchhHHHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE
Q psy2395 379 PRPETELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK 457 (570)
Q Consensus 379 pr~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~ 457 (570)
|++....+...++... ..++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++|+..++ ...++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~ 88 (192)
T 1l3i_A 14 PGPTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLME 88 (192)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEE
T ss_pred CCCChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEe
Confidence 4333344444444432 3567899999999999999999765 699999999999999999998642 224699999
Q ss_pred cccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc-CCC
Q psy2395 458 SNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG-YNQ 536 (570)
Q Consensus 458 ~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~-~~~ 536 (570)
+|+.+.++. .++||+|++++++. .+..+++.+.++|+|||.+++... ...
T Consensus 89 ~d~~~~~~~-~~~~D~v~~~~~~~----------------------------~~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 89 GDAPEALCK-IPDIDIAVVGGSGG----------------------------ELQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp SCHHHHHTT-SCCEEEEEESCCTT----------------------------CHHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred cCHHHhccc-CCCCCEEEECCchH----------------------------HHHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 998764432 15899999987642 236788999999999999988664 345
Q ss_pred HHHHHHHHHHCCCe
Q psy2395 537 SNLVRKLLFKYGFS 550 (570)
Q Consensus 537 ~~~l~~ll~~~Gf~ 550 (570)
...+.+++.+.||.
T Consensus 140 ~~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 140 KFEAMECLRDLGFD 153 (192)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCc
Confidence 67788899999994
No 89
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.54 E-value=3.6e-13 Score=134.53 Aligned_cols=145 Identities=14% Similarity=0.109 Sum_probs=109.8
Q ss_pred hHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 382 ETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 382 ~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
....+.+.++..+. .++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...++.++++|+
T Consensus 45 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~ 120 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAG--LANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECcc
Confidence 34455566655543 467899999999999999999875 4799999999999999999988642 234699999999
Q ss_pred ccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC------
Q psy2395 461 YNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------ 534 (570)
Q Consensus 461 ~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------ 534 (570)
.+ ++..+++||+|+++..+...+ ....+++.+.++|+|||++++....
T Consensus 121 ~~-~~~~~~~fD~v~~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~ 174 (273)
T 3bus_A 121 MD-LPFEDASFDAVWALESLHHMP-------------------------DRGRALREMARVLRPGGTVAIADFVLLAPVE 174 (273)
T ss_dssp TS-CCSCTTCEEEEEEESCTTTSS-------------------------CHHHHHHHHHTTEEEEEEEEEEEEEESSCCC
T ss_pred cc-CCCCCCCccEEEEechhhhCC-------------------------CHHHHHHHHHHHcCCCeEEEEEEeeccCCCC
Confidence 65 444457899999976544221 1368899999999999999874311
Q ss_pred -------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 -------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 -------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.+++.++||..+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 175 GAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEE
Confidence 1236678889999999876543
No 90
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.53 E-value=4.1e-14 Score=138.44 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=101.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...+ ...+++++++|+.+..+ .++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSP--KAEYFSFVKEDVFTWRP--TELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEECCCTTTCCC--SSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccC--CCcceEEEECchhcCCC--CCCeeEEEE
Confidence 4459999999999999999753 5799999999999999999987521 23469999999977443 368999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----------CCHHHHHHHHH
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-----------NQSNLVRKLLF 545 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-----------~~~~~l~~ll~ 545 (570)
+..+...+ .+....+++.+.+.|+|||.+++.... ...+.+.+++.
T Consensus 139 ~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 139 YVFFCAIE-----------------------PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp ESSTTTSC-----------------------GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred ChhhhcCC-----------------------HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 76543221 123478899999999999999875421 23678999999
Q ss_pred HCCCeeEEEEe
Q psy2395 546 KYGFSDIKSWR 556 (570)
Q Consensus 546 ~~Gf~~i~~~~ 556 (570)
++||..+.+..
T Consensus 196 ~~Gf~~~~~~~ 206 (235)
T 3lcc_A 196 PIGFKAVSVEE 206 (235)
T ss_dssp GGTEEEEEEEE
T ss_pred HcCCeEEEEEe
Confidence 99999987764
No 91
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.53 E-value=5.5e-14 Score=141.45 Aligned_cols=147 Identities=19% Similarity=0.155 Sum_probs=101.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---CCCce
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---YKKLF 471 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~~~~f 471 (570)
..++.+|||+|||+|..+..++...+...+|+|+|+|+.+++.+++|+..++. .++.++++|+.+.... ..++|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhhhccccC
Confidence 35678999999999999999998765347999999999999999999987531 2699999999664321 14689
Q ss_pred eEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----CCHHHHHHHHHHC
Q psy2395 472 NIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----NQSNLVRKLLFKY 547 (570)
Q Consensus 472 D~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~l~~ll~~~ 547 (570)
|+|++||||........ .|................+++.+.++|+|||++++.+.. .+...+..++.++
T Consensus 158 D~Vl~d~Pcs~~g~~~~-------~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDK-------NRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp EEEEEEECCC-------------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred CEEEEcCCCCCCccccc-------CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 99999999875432211 111111011111234578999999999999999886532 4455666777654
Q ss_pred -CCee
Q psy2395 548 -GFSD 551 (570)
Q Consensus 548 -Gf~~ 551 (570)
+|..
T Consensus 231 ~~~~~ 235 (274)
T 3ajd_A 231 NDVEL 235 (274)
T ss_dssp SSEEE
T ss_pred CCcEE
Confidence 4544
No 92
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=3.3e-14 Score=136.47 Aligned_cols=133 Identities=8% Similarity=0.008 Sum_probs=95.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc---------cCCCCEEEEEcccccccc
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT---------KYNIPIKFIKSNWYNNLQ 465 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~---------~~~~~v~~~~~D~~~~l~ 465 (570)
..++.+|||+|||+|..+..|++.+ .+|+|+|+|+.|++.|+++...... ....+++++++|+.+. +
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l-~ 95 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL-T 95 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS-T
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC-C
Confidence 3567899999999999999999864 6999999999999999987642000 0134699999999763 3
Q ss_pred cCC-CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE-EcC---------
Q psy2395 466 NYK-KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE-HGY--------- 534 (570)
Q Consensus 466 ~~~-~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~-~~~--------- 534 (570)
..+ ++||+|+++..++..+ .+....+++++.++|||||++++. +..
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~-----------------------~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~ 152 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALP-----------------------ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPP 152 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSC-----------------------HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCC
T ss_pred cccCCCEEEEEECcchhhCC-----------------------HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCC
Confidence 222 5899999965433110 123457899999999999985443 222
Q ss_pred --CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 --NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 --~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
...+++.+++.. ||..+.+.
T Consensus 153 ~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 153 FSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp CCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CCCCHHHHHHHhcC-CcEEEEec
Confidence 135778888877 99876544
No 93
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.53 E-value=1.4e-13 Score=136.68 Aligned_cols=146 Identities=18% Similarity=0.222 Sum_probs=106.6
Q ss_pred ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEE
Q psy2395 376 VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKF 455 (570)
Q Consensus 376 ~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~ 455 (570)
...+..+...+++.+. ..++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..++ ..++.+
T Consensus 19 ~~~~~~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~ 89 (260)
T 1vl5_A 19 IHAKGSDLAKLMQIAA---LKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNG---HQQVEY 89 (260)
T ss_dssp ----CCCHHHHHHHHT---CCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTT---CCSEEE
T ss_pred cccCHHHHHHHHHHhC---CCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcC---CCceEE
Confidence 3345555666666552 3467899999999999999999775 489999999999999999987642 136999
Q ss_pred EEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE--c
Q psy2395 456 IKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH--G 533 (570)
Q Consensus 456 ~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~--~ 533 (570)
+++|+.+ ++..+++||+|+++-.+... .....++.++.++|+|||++++.. .
T Consensus 90 ~~~d~~~-l~~~~~~fD~V~~~~~l~~~-------------------------~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 90 VQGDAEQ-MPFTDERFHIVTCRIAAHHF-------------------------PNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp EECCC-C-CCSCTTCEEEEEEESCGGGC-------------------------SCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EEecHHh-CCCCCCCEEEEEEhhhhHhc-------------------------CCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 9999965 44445799999997433211 123688999999999999998842 1
Q ss_pred C-----------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 534 Y-----------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 534 ~-----------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
. .....+.++|.++||..+.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 144 PENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp CSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 1 2246778899999999876554
No 94
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.53 E-value=1e-13 Score=140.02 Aligned_cols=130 Identities=12% Similarity=0.188 Sum_probs=102.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++...+.+.+|+|+|+|+.+++.|++++.. .+.+++++++|+.+ ++. .++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~----~~~~v~~~~~d~~~-~~~-~~~fD~v~ 94 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL----LPYDSEFLEGDATE-IEL-NDKYDIAI 94 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS----SSSEEEEEESCTTT-CCC-SSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh----cCCceEEEEcchhh-cCc-CCCeeEEE
Confidence 4678999999999999999998876458999999999999999999875 34479999999976 333 46899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++..+... .....+++.+.+.|+|||++++..+.
T Consensus 95 ~~~~l~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (284)
T 3gu3_A 95 CHAFLLHM-------------------------TTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQL 149 (284)
T ss_dssp EESCGGGC-------------------------SSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCH
T ss_pred ECChhhcC-------------------------CCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccch
Confidence 97543211 12368899999999999999876544
Q ss_pred ------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 ------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 ------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.++|+++||..+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 150 GVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEEE
Confidence 0123467889999999987643
No 95
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.52 E-value=3.8e-13 Score=144.81 Aligned_cols=165 Identities=16% Similarity=0.175 Sum_probs=115.5
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCC-CceeE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYK-KLFNI 473 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~-~~fD~ 473 (570)
..++.+|||+|||+|..+..++...+...+|+|+|+|+.+++.+++|+..++. .++.++++|+.+...... ++||+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhhccCCCCE
Confidence 35678999999999999999998765347999999999999999999987531 269999999976432222 67999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCCh----HHHHHHHHHHhhccccCeEEEEEEcC----CCHHHHHHHHH
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGL----SSIKEIVKNASKYLVKNGLLLIEHGY----NQSNLVRKLLF 545 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl----~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~l~~ll~ 545 (570)
|++|||+...... +..|...+....... .....++..+.++|+|||++++.+.. .+...+..++.
T Consensus 334 Vl~D~Pcsg~g~~-------~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~ 406 (450)
T 2yxl_A 334 VLLDAPCTSSGTI-------GKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLN 406 (450)
T ss_dssp EEEECCCCCGGGT-------TTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred EEEcCCCCCCeee-------ccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHH
Confidence 9999998654322 122222221112222 12367899999999999999886533 24456677788
Q ss_pred HC-CCeeE---------------EEEecCCCCceEEEEEe
Q psy2395 546 KY-GFSDI---------------KSWRDLSGIERVTQGKI 569 (570)
Q Consensus 546 ~~-Gf~~i---------------~~~~D~~g~~R~~~~~~ 569 (570)
++ +|..+ ++++...+.+-|+++++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l 446 (450)
T 2yxl_A 407 VHPEFKLVPLKSPYDPGFLEGTMRAWPHRHSTIGFFYALL 446 (450)
T ss_dssp HCSSCEECCCCSSSEECSSTTCEEECHHHHSSCCEEEEEE
T ss_pred hCCCCEEeecccccccccCCCeEEECCCCCCCCceEEEEE
Confidence 76 67653 34444456666776654
No 96
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.52 E-value=1.1e-13 Score=135.66 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=102.4
Q ss_pred hHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccc
Q psy2395 382 ETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWY 461 (570)
Q Consensus 382 ~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~ 461 (570)
....+++.+... .++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++.. . +++++++|+.
T Consensus 29 ~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~-----~--~v~~~~~d~~ 96 (250)
T 2p7i_A 29 MHPFMVRAFTPF--FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLK-----D--GITYIHSRFE 96 (250)
T ss_dssp HHHHHHHHHGGG--CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSC-----S--CEEEEESCGG
T ss_pred HHHHHHHHHHhh--cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhh-----C--CeEEEEccHH
Confidence 334445554332 256789999999999999998765 479999999999999998864 1 6999999997
Q ss_pred cccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHh-hccccCeEEEEEEcCC-----
Q psy2395 462 NNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNAS-KYLVKNGLLLIEHGYN----- 535 (570)
Q Consensus 462 ~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~-~~LkpgG~l~~~~~~~----- 535 (570)
+.. .+++||+|+++-..... .....+++++. ++|+|||++++..+..
T Consensus 97 ~~~--~~~~fD~v~~~~~l~~~-------------------------~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~ 149 (250)
T 2p7i_A 97 DAQ--LPRRYDNIVLTHVLEHI-------------------------DDPVALLKRINDDWLAEGGRLFLVCPNANAVSR 149 (250)
T ss_dssp GCC--CSSCEEEEEEESCGGGC-------------------------SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHH
T ss_pred HcC--cCCcccEEEEhhHHHhh-------------------------cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHH
Confidence 652 35789999995322111 12368899999 9999999999876321
Q ss_pred ----------------------------CHHHHHHHHHHCCCeeEEEE
Q psy2395 536 ----------------------------QSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 536 ----------------------------~~~~l~~ll~~~Gf~~i~~~ 555 (570)
..+.+.+++.++||..+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 150 QIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp HHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 34678999999999988765
No 97
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=1.5e-13 Score=136.83 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=112.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
...+.+.+.... +++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++. ++.++++|+.+
T Consensus 37 ~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~ 104 (263)
T 3pfg_A 37 AADLAALVRRHS-PKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP--------DAVLHHGDMRD 104 (263)
T ss_dssp HHHHHHHHHHHC-TTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTT
T ss_pred HHHHHHHHHhhC-CCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC--------CCEEEECChHH
Confidence 344555554433 456899999999999999998664 589999999999999998753 48899999976
Q ss_pred ccccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---------
Q psy2395 463 NLQNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH--------- 532 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~--------- 532 (570)
. +. +++||+|+++. .+.... ..+....+++.+.++|+|||.+++..
T Consensus 105 ~-~~-~~~fD~v~~~~~~l~~~~----------------------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 160 (263)
T 3pfg_A 105 F-SL-GRRFSAVTCMFSSIGHLA----------------------GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTP 160 (263)
T ss_dssp C-CC-SCCEEEEEECTTGGGGSC----------------------HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCT
T ss_pred C-Cc-cCCcCEEEEcCchhhhcC----------------------CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccc
Confidence 3 32 57899999975 332110 11345788999999999999998841
Q ss_pred ----------------------------------------------------cCCCHHHHHHHHHHCCCeeEEEEecCCC
Q psy2395 533 ----------------------------------------------------GYNQSNLVRKLLFKYGFSDIKSWRDLSG 560 (570)
Q Consensus 533 ----------------------------------------------------~~~~~~~l~~ll~~~Gf~~i~~~~D~~g 560 (570)
.....+++.++|+++||+++.+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~- 239 (263)
T 3pfg_A 161 GYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPS- 239 (263)
T ss_dssp TEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTT-
T ss_pred cccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCC-
Confidence 011368899999999999998876654
Q ss_pred CceEEEEEe
Q psy2395 561 IERVTQGKI 569 (570)
Q Consensus 561 ~~R~~~~~~ 569 (570)
...+++|++
T Consensus 240 ~~~~~va~K 248 (263)
T 3pfg_A 240 GRGLFTGLP 248 (263)
T ss_dssp SSCEEEEEE
T ss_pred CceeEEEec
Confidence 455677765
No 98
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.52 E-value=2.2e-13 Score=133.17 Aligned_cols=129 Identities=14% Similarity=0.069 Sum_probs=101.8
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccCCCcee
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNYKKLFN 472 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~~~~fD 472 (570)
.+++.+|||+|||+|.++..+|+...+..+|+|+|+++.|++.+++++.. ..++..+.+|...+. +...+.+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----RRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----CTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----hcCeeEEEEeccCccccccccceEE
Confidence 46899999999999999999998865578999999999999999998864 346889999986543 23347899
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC----------HHHHHH
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ----------SNLVRK 542 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~l~~ 542 (570)
+|+++.++.. ....++.++.+.|||||.+++.+.... .....+
T Consensus 150 vVf~d~~~~~---------------------------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~ 202 (233)
T 4df3_A 150 GLYADVAQPE---------------------------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIK 202 (233)
T ss_dssp EEEECCCCTT---------------------------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHH
T ss_pred EEEEeccCCh---------------------------hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHH
Confidence 9999876541 236788999999999999988653321 234566
Q ss_pred HHHHCCCeeEEEE
Q psy2395 543 LLFKYGFSDIKSW 555 (570)
Q Consensus 543 ll~~~Gf~~i~~~ 555 (570)
.|.+.||..++..
T Consensus 203 ~L~~~GF~l~e~i 215 (233)
T 4df3_A 203 TLMDGGLEIKDVV 215 (233)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCEEEEEE
Confidence 7888999988765
No 99
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.52 E-value=1.7e-13 Score=135.96 Aligned_cols=141 Identities=17% Similarity=0.221 Sum_probs=107.9
Q ss_pred HHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 385 LLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 385 ~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.++..++..+ ..++.+|||+|||+|.++..++..+ +.+|+|+|+|+.+++.|++++.. . .+++++++|+.+.
T Consensus 42 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~----~-~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 42 EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG----N-NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS----C-TTEEEEECCTTTC
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc----C-CCeEEEECccccC
Confidence 3344554443 2467799999999999999999876 47999999999999999988763 2 5799999999663
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc----------
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---------- 533 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---------- 533 (570)
+..+++||+|+++..+... +......+++.+.++|+|||++++...
T Consensus 115 -~~~~~~fD~v~~~~~l~~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (266)
T 3ujc_A 115 -EFPENNFDLIYSRDAILAL-----------------------SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD 170 (266)
T ss_dssp -CCCTTCEEEEEEESCGGGS-----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH
T ss_pred -CCCCCcEEEEeHHHHHHhc-----------------------ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH
Confidence 4445799999997543211 113567899999999999999988541
Q ss_pred ------------CCCHHHHHHHHHHCCCeeEEEEe
Q psy2395 534 ------------YNQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 534 ------------~~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
....+.+.+++.++||..+.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 171 EFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 12357889999999999887653
No 100
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=5.2e-13 Score=135.83 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=108.6
Q ss_pred HHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 386 LVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 386 l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
.++.++..+ ..++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++..++ ...+++++++|+.+.
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC-
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc-
Confidence 344444443 35678999999999999999998863 799999999999999999998642 334699999999653
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------- 534 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------- 534 (570)
+++||+|+++..+...++.. ...|...+..+++.+.++|+|||++++....
T Consensus 135 ---~~~fD~v~~~~~~~~~~d~~----------------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 195 (302)
T 3hem_A 135 ---DEPVDRIVSLGAFEHFADGA----------------GDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQEL 195 (302)
T ss_dssp ---CCCCSEEEEESCGGGTTCCS----------------SCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHH
T ss_pred ---CCCccEEEEcchHHhcCccc----------------cccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhc
Confidence 47899999976543221100 0013456789999999999999999884321
Q ss_pred -------------------------CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 -------------------------NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 -------------------------~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
.....+.+++.++||..+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~ 241 (302)
T 3hem_A 196 GLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYH 241 (302)
T ss_dssp TCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred cccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEE
Confidence 124567888999999987764
No 101
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=2.2e-13 Score=128.17 Aligned_cols=130 Identities=15% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.+++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++.. ++.++++|+.+. +...++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~--------~~~~~~~d~~~~-~~~~~~~D~i 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP--------EARWVVGDLSVD-QISETDFDLI 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTS-CCCCCCEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC--------CCcEEEcccccC-CCCCCceeEE
Confidence 356789999999999999999976 3699999999999999998763 378999999663 3334789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC---CHHHHHHHHHHCCCee
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN---QSNLVRKLLFKYGFSD 551 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~l~~ll~~~Gf~~ 551 (570)
+++|+....- ..+....++..+.+.|+|||.+++..+.. ....+.+++.++||..
T Consensus 112 ~~~~~~~~~~----------------------~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 112 VSAGNVMGFL----------------------AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp EECCCCGGGS----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEE
T ss_pred EECCcHHhhc----------------------ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEE
Confidence 9986543110 01234788999999999999999977654 4788999999999999
Q ss_pred EEEEecC
Q psy2395 552 IKSWRDL 558 (570)
Q Consensus 552 i~~~~D~ 558 (570)
+.+..+.
T Consensus 170 ~~~~~~~ 176 (195)
T 3cgg_A 170 ENAFESW 176 (195)
T ss_dssp EEEESST
T ss_pred eeeeccc
Confidence 8887664
No 102
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=134.23 Aligned_cols=142 Identities=15% Similarity=0.098 Sum_probs=103.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~~~~fD~ 473 (570)
.++.+|||+|||+|.++..+++...+..+|+|+|+|+.+++.+.+++..+ .+++++++|+.+. ++...++||+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCCcEEE
Confidence 46789999999999999999987533579999999999999999888752 4699999999763 2333478999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC----------HHHHHHH
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ----------SNLVRKL 543 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~l~~l 543 (570)
|++|+|.. +....++..+.+.|+|||++++.+.... .....++
T Consensus 151 V~~~~~~~---------------------------~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 203 (233)
T 2ipx_A 151 IFADVAQP---------------------------DQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKK 203 (233)
T ss_dssp EEECCCCT---------------------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHT
T ss_pred EEEcCCCc---------------------------cHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHH
Confidence 99998711 1235667889999999999999764311 1111477
Q ss_pred HHHCCCeeEEEEe-cCCCC-ceEEEEEe
Q psy2395 544 LFKYGFSDIKSWR-DLSGI-ERVTQGKI 569 (570)
Q Consensus 544 l~~~Gf~~i~~~~-D~~g~-~R~~~~~~ 569 (570)
|.++||..++... +.... .-++++++
T Consensus 204 l~~~Gf~~~~~~~~~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 204 MQQENMKPQEQLTLEPYERDHAVVVGVY 231 (233)
T ss_dssp TGGGTEEEEEEEECTTTSSSEEEEEEEE
T ss_pred HHHCCCceEEEEecCCccCCcEEEEEEe
Confidence 7889999887443 22222 34555554
No 103
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.51 E-value=9.7e-14 Score=137.97 Aligned_cols=132 Identities=11% Similarity=0.012 Sum_probs=95.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh----------hcc----cCCCCEEEEEcccc
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK----------KLT----KYNIPIKFIKSNWY 461 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~----------~~~----~~~~~v~~~~~D~~ 461 (570)
.++.+|||+|||+|..+..|++.+ .+|+|||+|+.|++.|+++... .+. ....+++|+++|++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 367899999999999999999764 6999999999999999876531 000 01357999999997
Q ss_pred cccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE-EcC------
Q psy2395 462 NNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE-HGY------ 534 (570)
Q Consensus 462 ~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~-~~~------ 534 (570)
+......++||+|+++..+...+ .+....+++.+.++|+|||++++. +..
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~-----------------------~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~ 200 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAIN-----------------------PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA 200 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSC-----------------------GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCC
T ss_pred cCCcccCCCEEEEEEhhhhhhCC-----------------------HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCC
Confidence 74332127899999976543211 012367899999999999998653 221
Q ss_pred -----CCHHHHHHHHHHCCCeeEEE
Q psy2395 535 -----NQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 535 -----~~~~~l~~ll~~~Gf~~i~~ 554 (570)
...+++.+++.. +|.++..
T Consensus 201 g~~~~~~~~el~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 201 GPPFYVPSAELKRLFGT-KCSMQCL 224 (252)
T ss_dssp CSSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred CCCCCCCHHHHHHHhhC-CeEEEEE
Confidence 245778888876 5877544
No 104
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=3.2e-13 Score=125.83 Aligned_cols=130 Identities=19% Similarity=0.187 Sum_probs=100.9
Q ss_pred HHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 384 ELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 384 ~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
..+...++... ..++.+|||+|||+|.++..++. ...+|+|+|+|+.+++.|++|+..++. .+++++++|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~~ 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCccc
Confidence 44444444433 24677999999999999999997 258999999999999999999987421 369999999977
Q ss_pred ccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc-CCCHHHHH
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG-YNQSNLVR 541 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~l~ 541 (570)
.++. ++||+|++++| . .+..+++.+.+. |||.+++... ......+.
T Consensus 95 ~~~~--~~~D~i~~~~~----~-------------------------~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~ 141 (183)
T 2yxd_A 95 VLDK--LEFNKAFIGGT----K-------------------------NIEKIIEILDKK--KINHIVANTIVLENAAKII 141 (183)
T ss_dssp HGGG--CCCSEEEECSC----S-------------------------CHHHHHHHHHHT--TCCEEEEEESCHHHHHHHH
T ss_pred cccC--CCCcEEEECCc----c-------------------------cHHHHHHHHhhC--CCCEEEEEecccccHHHHH
Confidence 4443 68999999887 1 135777777777 9999998774 35567788
Q ss_pred HHHHHCCCeeE
Q psy2395 542 KLLFKYGFSDI 552 (570)
Q Consensus 542 ~ll~~~Gf~~i 552 (570)
+.++++||...
T Consensus 142 ~~l~~~g~~~~ 152 (183)
T 2yxd_A 142 NEFESRGYNVD 152 (183)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCeEE
Confidence 99999998653
No 105
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=4.5e-14 Score=146.75 Aligned_cols=137 Identities=24% Similarity=0.395 Sum_probs=105.4
Q ss_pred CeeeeecCCccccc---hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 367 GLVLNITSDVLIPR---PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 367 ~~~~~v~~~~~~pr---~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
+..+...|++|.+. ..++.+++.+. ..++.+|||+|||+|.++..+++.++ ..+|+|+|+|+.+++.|++|+.
T Consensus 166 ~~~~~~~~gvf~~~~~d~~~~~ll~~l~---~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~ 241 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLDVGSQLLLSTLT---PHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLA 241 (343)
T ss_dssp TEEEEECTTCTTSSSCCHHHHHHHHHSC---TTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHH
T ss_pred ceEEEecCCccCCCCCcHHHHHHHHhcC---cCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH
Confidence 56677788888765 23555554431 23466999999999999999998875 4699999999999999999998
Q ss_pred hhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 444 KKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 444 ~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
.+ +..+.++.+|+.+.. .++||+|++||||+.... ........+++.+.++|+
T Consensus 242 ~~----~~~~~~~~~d~~~~~---~~~fD~Iv~~~~~~~g~~--------------------~~~~~~~~~l~~~~~~Lk 294 (343)
T 2pjd_A 242 AN----GVEGEVFASNVFSEV---KGRFDMIISNPPFHDGMQ--------------------TSLDAAQTLIRGAVRHLN 294 (343)
T ss_dssp HT----TCCCEEEECSTTTTC---CSCEEEEEECCCCCSSSH--------------------HHHHHHHHHHHHHGGGEE
T ss_pred Hh----CCCCEEEEccccccc---cCCeeEEEECCCcccCcc--------------------CCHHHHHHHHHHHHHhCC
Confidence 64 445778999987643 468999999999873210 012346789999999999
Q ss_pred cCeEEEEEEcC
Q psy2395 524 KNGLLLIEHGY 534 (570)
Q Consensus 524 pgG~l~~~~~~ 534 (570)
|||.+++..+.
T Consensus 295 pgG~l~i~~~~ 305 (343)
T 2pjd_A 295 SGGELRIVANA 305 (343)
T ss_dssp EEEEEEEEEET
T ss_pred CCcEEEEEEcC
Confidence 99999987654
No 106
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=3.7e-13 Score=130.49 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=92.3
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.+++..+++.+|+|+|+++.+++.|++|+...+ ...+++++++|+
T Consensus 44 ~~~~~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 119 (223)
T 3duw_A 44 PTQGKFLQLLVQI--QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLA 119 (223)
T ss_dssp HHHHHHHHHHHHH--HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCH
T ss_pred HHHHHHHHHHHHh--hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCH
Confidence 4444444444433 256799999999999999999887646899999999999999999998743 334699999999
Q ss_pred ccccccC----CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 461 YNNLQNY----KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 461 ~~~l~~~----~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.+.++.. .++||+|+++++. ..+..+++.+.++|+|||++++..
T Consensus 120 ~~~~~~~~~~~~~~fD~v~~d~~~----------------------------~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 120 LDSLQQIENEKYEPFDFIFIDADK----------------------------QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHHHHTTCCCCSEEEECSCG----------------------------GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHHHHHhcCCCCcCEEEEcCCc----------------------------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 7654321 1579999998651 134678889999999999888753
No 107
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.51 E-value=9.8e-14 Score=136.35 Aligned_cols=146 Identities=15% Similarity=0.164 Sum_probs=106.7
Q ss_pred hHHHHHHHHHhhcC--CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 382 ETELLVDLIVKKTF--EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 382 ~t~~l~~~~~~~~~--~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
.+..++..++.... .++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++..++ ..++.++++|
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d 136 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCG 136 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECC
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcC
Confidence 34455555444332 257899999999999999988765 4699999999999999999987531 3358999999
Q ss_pred cccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----
Q psy2395 460 WYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----- 534 (570)
Q Consensus 460 ~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----- 534 (570)
+.+ ++...++||+|+++-.+...+ -..+..+++.+.++|+|||++++..+.
T Consensus 137 ~~~-~~~~~~~fD~v~~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 192 (241)
T 2ex4_A 137 LQD-FTPEPDSYDVIWIQWVIGHLT-----------------------DQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV 192 (241)
T ss_dssp GGG-CCCCSSCEEEEEEESCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE
T ss_pred hhh-cCCCCCCEEEEEEcchhhhCC-----------------------HHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc
Confidence 865 333346899999964322110 013468999999999999999884321
Q ss_pred ----------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 ----------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 ----------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
...+.+.+++.++||..+.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 193 ILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp EEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred eecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 1478899999999999887654
No 108
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=2.6e-13 Score=129.40 Aligned_cols=127 Identities=17% Similarity=0.160 Sum_probs=100.5
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEEC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~N 477 (570)
+.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++.. ++.++++|+.+ ++..+++||+|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~-~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTHP--------SVTFHHGTITD-LSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHCT--------TSEEECCCGGG-GGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--------CCeEEeCcccc-cccCCCCeEEEEeh
Confidence 6799999999999999999763 589999999999999998732 48899999966 44445799999997
Q ss_pred CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------------CCHHHHH
Q psy2395 478 PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----------------NQSNLVR 541 (570)
Q Consensus 478 PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----------------~~~~~l~ 541 (570)
..+...+ .+....+++.+.+.|+|||++++.... ...+.+.
T Consensus 110 ~~l~~~~-----------------------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (203)
T 3h2b_A 110 YSLIHMG-----------------------PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELA 166 (203)
T ss_dssp SSSTTCC-----------------------TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHH
T ss_pred hhHhcCC-----------------------HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHH
Confidence 5433211 013478899999999999999986632 2368899
Q ss_pred HHHHHCCCeeEEEEecCC
Q psy2395 542 KLLFKYGFSDIKSWRDLS 559 (570)
Q Consensus 542 ~ll~~~Gf~~i~~~~D~~ 559 (570)
+++.++||..+.+...-.
T Consensus 167 ~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 167 QALETAGFQVTSSHWDPR 184 (203)
T ss_dssp HHHHHTTEEEEEEEECTT
T ss_pred HHHHHCCCcEEEEEecCC
Confidence 999999999987765433
No 109
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.50 E-value=5.5e-13 Score=130.49 Aligned_cols=142 Identities=18% Similarity=0.222 Sum_probs=107.7
Q ss_pred HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 385 LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 385 ~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
.+.+.+...+ +++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|++++..+ +.+++++++|+.+.
T Consensus 22 ~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~- 91 (243)
T 3d2l_A 22 EWVAWVLEQV-EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMREL- 91 (243)
T ss_dssp HHHHHHHHHS-CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGC-
T ss_pred HHHHHHHHHc-CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhc-
Confidence 3445555543 45689999999999999998854 58999999999999999998763 45689999999663
Q ss_pred ccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc----------
Q psy2395 465 QNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---------- 533 (570)
Q Consensus 465 ~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---------- 533 (570)
+. .++||+|++++ ++... ........+++.+.++|+|||.+++.++
T Consensus 92 ~~-~~~fD~v~~~~~~~~~~----------------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 148 (243)
T 3d2l_A 92 EL-PEPVDAITILCDSLNYL----------------------QTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFN 148 (243)
T ss_dssp CC-SSCEEEEEECTTGGGGC----------------------CSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTS
T ss_pred CC-CCCcCEEEEeCCchhhc----------------------CCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcC
Confidence 22 37899999964 22110 0123457889999999999999987431
Q ss_pred ---------------------------------------------------CCCHHHHHHHHHHCCCeeEEEEecCC
Q psy2395 534 ---------------------------------------------------YNQSNLVRKLLFKYGFSDIKSWRDLS 559 (570)
Q Consensus 534 ---------------------------------------------------~~~~~~l~~ll~~~Gf~~i~~~~D~~ 559 (570)
....+++.++|+++||+.+.++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 225 (243)
T 3d2l_A 149 GKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFK 225 (243)
T ss_dssp SEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTS
T ss_pred CcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcc
Confidence 12467899999999999999988753
No 110
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.50 E-value=2.2e-13 Score=131.55 Aligned_cols=147 Identities=10% Similarity=0.083 Sum_probs=102.8
Q ss_pred hhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc--CCCCEEEEE
Q psy2395 381 PETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK--YNIPIKFIK 457 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~--~~~~v~~~~ 457 (570)
+......+.+...+. .++.+|||+|||+|.++..+++.++ ..+|+|+|+|+.+++.|++++..++.. ...++++++
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 344444444444322 3577999999999999999998764 479999999999999999998753210 012699999
Q ss_pred cccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---
Q psy2395 458 SNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--- 534 (570)
Q Consensus 458 ~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--- 534 (570)
+|+.. .+...++||+|+++..+...+ ...+..+++.+.++|+|||.+++....
T Consensus 91 ~d~~~-~~~~~~~fD~v~~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 146 (217)
T 3jwh_A 91 GALTY-QDKRFHGYDAATVIEVIEHLD-----------------------LSRLGAFERVLFEFAQPKIVIVTTPNIEYN 146 (217)
T ss_dssp CCTTS-CCGGGCSCSEEEEESCGGGCC-----------------------HHHHHHHHHHHHTTTCCSEEEEEEEBHHHH
T ss_pred CCccc-ccccCCCcCEEeeHHHHHcCC-----------------------HHHHHHHHHHHHHHcCCCEEEEEccCcccc
Confidence 99843 333346899999965432111 124478999999999999977664321
Q ss_pred -------------------CCHHHHH----HHHHHCCCeeE
Q psy2395 535 -------------------NQSNLVR----KLLFKYGFSDI 552 (570)
Q Consensus 535 -------------------~~~~~l~----~ll~~~Gf~~i 552 (570)
...+++. .++.++||.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 147 VKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp HHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred hhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 1344555 78888999764
No 111
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.50 E-value=6.5e-14 Score=140.85 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=103.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh-cccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK-LTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..+++...++.+|+|+|+|+.+++.|++|+..+ + ..+++++++|+.+.++ +++||+|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~--~~~fD~V 183 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIADFIS--DQMYDAV 183 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTTCCC--SCCEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhccCc--CCCccEE
Confidence 46789999999999999999987323579999999999999999999863 2 2369999999977443 3689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC-CHHHHHHHHHHCCCeeEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN-QSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~l~~ll~~~Gf~~i~ 553 (570)
++|+|.. ..+++.+.+.|+|||++++..+.. +...+.+.+.+.||..++
T Consensus 184 i~~~~~~------------------------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 184 IADIPDP------------------------------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp EECCSCG------------------------------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEE
T ss_pred EEcCcCH------------------------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 9987621 356778888999999999988764 567778888889999888
Q ss_pred EEec
Q psy2395 554 SWRD 557 (570)
Q Consensus 554 ~~~D 557 (570)
.+..
T Consensus 234 ~~~~ 237 (275)
T 1yb2_A 234 TVEL 237 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7763
No 112
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.50 E-value=2e-13 Score=132.63 Aligned_cols=135 Identities=18% Similarity=0.144 Sum_probs=103.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC--CCCEEEEEcccccccccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY--NIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~--~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
+++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++..++... ..++.++++|+.. ++...++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS-LSFHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS-CCSCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc-cCCCCCceeE
Confidence 46789999999999999999976 3699999999999999999987532110 1258999999965 3433578999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc--------------------
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG-------------------- 533 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~-------------------- 533 (570)
|+++..+.... .......+++.+.+.|+|||.+++...
T Consensus 105 v~~~~~l~~~~----------------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (235)
T 3sm3_A 105 AVMQAFLTSVP----------------------DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPIT 162 (235)
T ss_dssp EEEESCGGGCC----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHH
T ss_pred EEEcchhhcCC----------------------CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccch
Confidence 99976543221 112345899999999999999988532
Q ss_pred ---------------------CCCHHHHHHHHHHCCCeeEEEEe
Q psy2395 534 ---------------------YNQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 534 ---------------------~~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
....+.+.++++++||.++.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 163 KEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 23568899999999999987654
No 113
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.50 E-value=4.7e-13 Score=144.78 Aligned_cols=168 Identities=14% Similarity=0.161 Sum_probs=111.6
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCE
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPI 453 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v 453 (570)
.+.+.....+..++..++.....++.+|||+|||+|..++.+|...++..+|+|+|+|+.+++.+++|+..++. .++
T Consensus 94 ~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv 170 (479)
T 2frx_A 94 SGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNV 170 (479)
T ss_dssp TTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSE
T ss_pred CcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcE
Confidence 34444444444444333332112678999999999999999998765457999999999999999999987532 259
Q ss_pred EEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCc-cccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 454 KFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDL-RFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 454 ~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~-~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.++++|+.+......++||+|++|||+.........+... .+.|.. ...-......++..+.++|||||++++.+
T Consensus 171 ~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~----~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 171 ALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPES----NQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHH----HHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhH----HHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999999664322346899999999987543221111111 011100 00001234689999999999999998865
Q ss_pred cC----CCHHHHHHHHHHCC
Q psy2395 533 GY----NQSNLVRKLLFKYG 548 (570)
Q Consensus 533 ~~----~~~~~l~~ll~~~G 548 (570)
.. .+...+..++.+++
T Consensus 247 cs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 247 CTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp SCCSSTTTHHHHHHHHHHST
T ss_pred ccCCcccCHHHHHHHHHHCC
Confidence 32 44556677777764
No 114
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.50 E-value=2.2e-13 Score=143.67 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=99.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC---CCceeE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY---KKLFNI 473 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD~ 473 (570)
++.+|||+|||+|.+++.++.. ..+|+|+|+|+.+++.|++|+..|+. .+++++++|+.+.++.. ..+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999976 36899999999999999999998632 23999999997754421 468999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC--H----HHHHHHHHHC
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ--S----NLVRKLLFKY 547 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~----~~l~~ll~~~ 547 (570)
|++|||++..... . + ......+..++..+.++|+|||++++...... . ..+.+.+.+.
T Consensus 283 Ii~dpP~~~~~~~-----~--------~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 346 (382)
T 1wxx_A 283 VVLDPPAFAKGKK-----D--------V---ERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDA 346 (382)
T ss_dssp EEECCCCSCCSTT-----S--------H---HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCChh-----H--------H---HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 9999998754311 0 0 01234678899999999999999988765422 2 2344556667
Q ss_pred CCe
Q psy2395 548 GFS 550 (570)
Q Consensus 548 Gf~ 550 (570)
|..
T Consensus 347 g~~ 349 (382)
T 1wxx_A 347 HRL 349 (382)
T ss_dssp TCC
T ss_pred CCe
Confidence 643
No 115
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=1.4e-13 Score=139.89 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=85.4
Q ss_pred HHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCC
Q psy2395 389 LIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYK 468 (570)
Q Consensus 389 ~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~ 468 (570)
.++..+..++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...+.....+++++++|+.+. +. +
T Consensus 74 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~~-~ 148 (299)
T 3g2m_A 74 EFATRTGPVSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-AL-D 148 (299)
T ss_dssp HHHHHHCCCCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-CC-S
T ss_pred HHHHhhCCCCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-Cc-C
Confidence 333333444569999999999999999966 368999999999999999998853111115799999999763 32 5
Q ss_pred CceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 469 KLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 469 ~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
++||+|++.. .+... ..+....+++.+.+.|+|||++++.+
T Consensus 149 ~~fD~v~~~~~~~~~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 149 KRFGTVVISSGSINEL-----------------------DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp CCEEEEEECHHHHTTS-----------------------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCcccccC-----------------------CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 7899999731 11100 11245789999999999999999865
No 116
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.50 E-value=1.4e-13 Score=136.06 Aligned_cols=127 Identities=17% Similarity=0.196 Sum_probs=101.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|++++. ..++.++++|+.+ ++..+++||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~-~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIED-IAIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGG-CCCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhh-CCCCCCCeEEEEE
Confidence 678999999999999999998763 399999999999999998864 3469999999965 4444579999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------------------
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------------------- 534 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------------------- 534 (570)
+..+... .....+++.+.++|+|||.+++.++.
T Consensus 115 ~~~l~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (253)
T 3g5l_A 115 SLALHYI-------------------------ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHW 169 (253)
T ss_dssp ESCGGGC-------------------------SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEE
T ss_pred chhhhhh-------------------------hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEE
Confidence 6543211 12478899999999999999986421
Q ss_pred ------------------------CCHHHHHHHHHHCCCeeEEEEec
Q psy2395 535 ------------------------NQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 535 ------------------------~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
...+.+.++|.++||.++.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 170 PVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred EeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 05688999999999999887754
No 117
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.50 E-value=4.4e-13 Score=131.64 Aligned_cols=141 Identities=18% Similarity=0.260 Sum_probs=105.3
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
|....+++.+ ...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..++ ..++.++++|+
T Consensus 8 ~~~~~~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~ 78 (239)
T 1xxl_A 8 HSLGLMIKTA---ECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTA 78 (239)
T ss_dssp HHHHHHHHHH---TCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBT
T ss_pred CCcchHHHHh---CcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcC---CCCeEEEeccc
Confidence 3344444443 23577899999999999999998765 489999999999999999988642 23699999999
Q ss_pred ccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC------
Q psy2395 461 YNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------ 534 (570)
Q Consensus 461 ~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------ 534 (570)
.+ ++..+++||+|+++...... .....++.++.++|+|||++++....
T Consensus 79 ~~-~~~~~~~fD~v~~~~~l~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 132 (239)
T 1xxl_A 79 ES-LPFPDDSFDIITCRYAAHHF-------------------------SDVRKAVREVARVLKQDGRFLLVDHYAPEDPV 132 (239)
T ss_dssp TB-CCSCTTCEEEEEEESCGGGC-------------------------SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHH
T ss_pred cc-CCCCCCcEEEEEECCchhhc-------------------------cCHHHHHHHHHHHcCCCcEEEEEEcCCCCChh
Confidence 55 44445789999996432211 12368899999999999999885321
Q ss_pred -------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 -------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 -------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.+++.++||..+.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 133 LDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 2346788889999999876654
No 118
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=2.1e-13 Score=133.56 Aligned_cols=119 Identities=18% Similarity=0.303 Sum_probs=93.6
Q ss_pred chhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 380 RPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 380 r~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
.+....++..++.. .++.+|||+|||+|..++.++...+ +.+|+|+|+|+.+++.|++++...+ ...+++++++|
T Consensus 56 ~~~~~~~l~~~~~~--~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d 130 (232)
T 3ntv_A 56 DRLTLDLIKQLIRM--NNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGN 130 (232)
T ss_dssp CHHHHHHHHHHHHH--HTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESC
T ss_pred CHHHHHHHHHHHhh--cCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECC
Confidence 34444444444443 2567999999999999999998654 6899999999999999999998742 23479999999
Q ss_pred cccccc-cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 460 WYNNLQ-NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 460 ~~~~l~-~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+.+.++ ...++||+|+++++.. .+..+++.+.++|+|||++++.
T Consensus 131 ~~~~~~~~~~~~fD~V~~~~~~~----------------------------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 131 ALEQFENVNDKVYDMIFIDAAKA----------------------------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp GGGCHHHHTTSCEEEEEEETTSS----------------------------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhhccCCccEEEEcCcHH----------------------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 988666 4457899999976421 2467899999999999999873
No 119
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.50 E-value=4.1e-13 Score=131.21 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=103.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc---cccCCCcee
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN---LQNYKKLFN 472 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 472 (570)
.++.+|||+|||+|.++..++...+ ..+|+|+|+|+.+++.|++|+.. . .++.++.+|+.+. .+. .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~----~-~~v~~~~~d~~~~~~~~~~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE----R-ENIIPILGDANKPQEYANI-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT----C-TTEEEEECCTTCGGGGTTT-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc----C-CCeEEEECCCCCccccccc-CccEE
Confidence 4678999999999999999998865 57999999999999999999874 2 5699999999652 222 26899
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---CC--------HHHHH
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---NQ--------SNLVR 541 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---~~--------~~~l~ 541 (570)
+|+.++|.. .....+++.+.+.|+|||++++.+.. .. ...+.
T Consensus 146 ~v~~~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~ 198 (230)
T 1fbn_A 146 VIYEDVAQP---------------------------NQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE 198 (230)
T ss_dssp EEEECCCST---------------------------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH
T ss_pred EEEEecCCh---------------------------hHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH
Confidence 999865421 13467789999999999999886421 11 14555
Q ss_pred HHHHHCCCeeEEEEecCCCC---ceEEEEEe
Q psy2395 542 KLLFKYGFSDIKSWRDLSGI---ERVTQGKI 569 (570)
Q Consensus 542 ~ll~~~Gf~~i~~~~D~~g~---~R~~~~~~ 569 (570)
+|.++||..++.. ++... .-++++++
T Consensus 199 -~l~~~Gf~~~~~~-~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 199 -ILEAGGFKIVDEV-DIEPFEKDHVMFVGIW 227 (230)
T ss_dssp -HHHHHTEEEEEEE-ECTTTSTTEEEEEEEE
T ss_pred -HHHHCCCEEEEEE-ccCCCccceEEEEEEe
Confidence 8888999987765 33333 34566654
No 120
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.50 E-value=7.6e-13 Score=131.03 Aligned_cols=120 Identities=14% Similarity=0.210 Sum_probs=92.8
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.+++..+++.+|+|+|+|+.+++.|++|+..++ ...+++++++|+
T Consensus 49 ~~~~~~l~~l~~~--~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~ 124 (248)
T 3tfw_A 49 ANQGQFLALLVRL--TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPA 124 (248)
T ss_dssp HHHHHHHHHHHHH--HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCH
T ss_pred HHHHHHHHHHHhh--cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCH
Confidence 3344444444332 256799999999999999999887646899999999999999999998753 334699999999
Q ss_pred ccccccCC--CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 461 YNNLQNYK--KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 461 ~~~l~~~~--~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.+.++... ++||+|+++.+. ..+..+++.+.++|+|||++++..
T Consensus 125 ~~~l~~~~~~~~fD~V~~d~~~----------------------------~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 125 LQSLESLGECPAFDLIFIDADK----------------------------PNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp HHHHHTCCSCCCCSEEEECSCG----------------------------GGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HHHHHhcCCCCCeEEEEECCch----------------------------HHHHHHHHHHHHhcCCCeEEEEeC
Confidence 77555433 489999997641 134678889999999999998743
No 121
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.49 E-value=5.6e-13 Score=135.02 Aligned_cols=130 Identities=14% Similarity=0.230 Sum_probs=101.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...+++++++|+.+ ++..+++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~-~~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSFLE-IPCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCTTS-CSSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCccc-CCCCCCCEeEEE
Confidence 567899999999999999999875 3699999999999999999987643 33469999999965 444457899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++..+...+ ....+++++.++|+|||++++..+.
T Consensus 156 ~~~~l~~~~-------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2o57_A 156 SQDAFLHSP-------------------------DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHD 210 (297)
T ss_dssp EESCGGGCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSS
T ss_pred ecchhhhcC-------------------------CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCC
Confidence 964332111 1378899999999999999885421
Q ss_pred -CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 -NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 -~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
.....+.+++.++||..+.+.
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEE
Confidence 134567889999999988764
No 122
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.49 E-value=2.7e-13 Score=144.58 Aligned_cols=130 Identities=17% Similarity=0.228 Sum_probs=102.7
Q ss_pred ccCeeeeecCCccccc--hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Q psy2395 365 FYGLVLNITSDVLIPR--PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA 442 (570)
Q Consensus 365 f~~~~~~v~~~~~~pr--~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~ 442 (570)
+.+..|.++++.|.+. ..++.+++++.. ..++.+|||+|||+|.+++.+|+.. .+|+|+|+|+.|++.|++|+
T Consensus 258 ~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~--~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~ 332 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSYQAVNLVRKVSE--LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNV 332 (425)
T ss_dssp ETTEEEEECTTSCCCSBHHHHHHHHHHHHH--HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH
T ss_pred ECCEEEEEccccccccCHHHHHHHHHHhhc--cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHH
Confidence 4689999999999865 567788888776 3467799999999999999999753 68999999999999999999
Q ss_pred HhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcc
Q psy2395 443 KKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYL 522 (570)
Q Consensus 443 ~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~L 522 (570)
..|+ ..++|+++|+.+.++ .+||+|++|||+.... ..+++.+. .|
T Consensus 333 ~~ng----l~v~~~~~d~~~~~~---~~fD~Vv~dPPr~g~~---------------------------~~~~~~l~-~l 377 (425)
T 2jjq_A 333 EINN----VDAEFEVASDREVSV---KGFDTVIVDPPRAGLH---------------------------PRLVKRLN-RE 377 (425)
T ss_dssp HHHT----CCEEEEECCTTTCCC---TTCSEEEECCCTTCSC---------------------------HHHHHHHH-HH
T ss_pred HHcC----CcEEEEECChHHcCc---cCCCEEEEcCCccchH---------------------------HHHHHHHH-hc
Confidence 8753 239999999977543 3899999999974211 23444433 48
Q ss_pred ccCeEEEEEEcC
Q psy2395 523 VKNGLLLIEHGY 534 (570)
Q Consensus 523 kpgG~l~~~~~~ 534 (570)
+|+|++++.+.+
T Consensus 378 ~p~givyvsc~p 389 (425)
T 2jjq_A 378 KPGVIVYVSCNP 389 (425)
T ss_dssp CCSEEEEEESCH
T ss_pred CCCcEEEEECCh
Confidence 999999987654
No 123
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.49 E-value=1.3e-13 Score=135.65 Aligned_cols=147 Identities=20% Similarity=0.212 Sum_probs=111.4
Q ss_pred CCccccchhHHHHHHHHHhhc-----------------CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHH
Q psy2395 374 SDVLIPRPETELLVDLIVKKT-----------------FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALK 436 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~-----------------~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~ 436 (570)
+.+++|+|++..+.+.+.... ..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++
T Consensus 51 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~ 127 (248)
T 2yvl_A 51 NGFEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYK 127 (248)
T ss_dssp TTEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHH
T ss_pred EEEEEeCCCHHHHHHhcCcCCCCcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHH
Confidence 567788887776664433211 136789999999999999999987 369999999999999
Q ss_pred HHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 437 IAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 437 ~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
.|++|...++ ...++++..+|+.+... ..++||+|++|+|.. ..+++
T Consensus 128 ~a~~~~~~~~--~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~~~------------------------------~~~l~ 174 (248)
T 2yvl_A 128 TAQKNLKKFN--LGKNVKFFNVDFKDAEV-PEGIFHAAFVDVREP------------------------------WHYLE 174 (248)
T ss_dssp HHHHHHHHTT--CCTTEEEECSCTTTSCC-CTTCBSEEEECSSCG------------------------------GGGHH
T ss_pred HHHHHHHHcC--CCCcEEEEEcChhhccc-CCCcccEEEECCcCH------------------------------HHHHH
Confidence 9999998642 23469999999977541 236899999988621 24567
Q ss_pred HHhhccccCeEEEEEEcC-CCHHHHHHHHHHCCCeeEEEEec
Q psy2395 517 NASKYLVKNGLLLIEHGY-NQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~-~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
.+.+.|+|||++++..+. .+...+...+.+. |..++.+..
T Consensus 175 ~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 215 (248)
T 2yvl_A 175 KVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FGNLEVVEI 215 (248)
T ss_dssp HHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EEEEEEEEE
T ss_pred HHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCcceEEEe
Confidence 778899999999998875 4666777777776 887766543
No 124
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=3.9e-13 Score=134.58 Aligned_cols=131 Identities=27% Similarity=0.292 Sum_probs=102.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..++ +.+|+|+|+|+.+++.|++++..++ ..++.++++|+.+ ++..+++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~-~~~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFS-LPFEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGG-CCSCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEccccc-CCCCCCCeeEEE
Confidence 5678999999999999999998875 5899999999999999999998642 2369999999965 343457999999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++..+...+ ....+++.+.++|+|||++++..+.
T Consensus 111 ~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (276)
T 3mgg_A 111 VCFVLEHLQ-------------------------SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLI 165 (276)
T ss_dssp EESCGGGCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHH
T ss_pred EechhhhcC-------------------------CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHH
Confidence 975543211 1257889999999999999886422
Q ss_pred ----------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 ----------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 ----------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+..+|+++||..+.+..
T Consensus 166 ~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 166 RVQAYMKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp HHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred HHHHhcCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 1124677889999999887653
No 125
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.49 E-value=3.8e-13 Score=131.71 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=105.4
Q ss_pred HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 385 LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 385 ~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
.++..+.... +++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++.. ..+++++++|+.+ +
T Consensus 42 ~~~~~l~~~~-~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~-~ 110 (242)
T 3l8d_A 42 TIIPFFEQYV-KKEAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSS-L 110 (242)
T ss_dssp THHHHHHHHS-CTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTB-C
T ss_pred HHHHHHHHHc-CCCCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcc------cCCceEEEcchhc-C
Confidence 3444444433 467799999999999999999763 689999999999999988752 3469999999965 3
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------- 534 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------- 534 (570)
+..+++||+|+++..+...+ ....+++.+.+.|+|||.+++....
T Consensus 111 ~~~~~~fD~v~~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 165 (242)
T 3l8d_A 111 PFENEQFEAIMAINSLEWTE-------------------------EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY 165 (242)
T ss_dssp SSCTTCEEEEEEESCTTSSS-------------------------CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG
T ss_pred CCCCCCccEEEEcChHhhcc-------------------------CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh
Confidence 43457999999975543221 2367899999999999999986522
Q ss_pred ------------CCHHHHHHHHHHCCCeeEEEEecC
Q psy2395 535 ------------NQSNLVRKLLFKYGFSDIKSWRDL 558 (570)
Q Consensus 535 ------------~~~~~l~~ll~~~Gf~~i~~~~D~ 558 (570)
.....+.+++.++||..+.....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 166 PRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp GGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhccccccccCCCHHHHHHHHHHcCCEEEEeeccc
Confidence 224678999999999998876443
No 126
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.49 E-value=1.9e-13 Score=144.79 Aligned_cols=145 Identities=23% Similarity=0.275 Sum_probs=103.7
Q ss_pred cCeeeeecC-----CccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 366 YGLVLNITS-----DVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 366 ~~~~~~v~~-----~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.+..|.+++ +.|........+ +. ....++.+|||+|||+|.+++.++..+ ..+|+|+|+|+.+++.|++
T Consensus 185 ~g~~~~~~~~~~~tg~f~~~~~~~~~---~~-~~~~~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~ 258 (396)
T 2as0_A 185 GRAKFIVDMRGQKTGFFLDQRENRLA---LE-KWVQPGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKE 258 (396)
T ss_dssp TTEEEEEESSSSSSCCCSTTHHHHHH---HG-GGCCTTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEEeccccccCccCCHHHHHHH---HH-HHhhCCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHH
Confidence 467777775 344322233222 22 223467899999999999999999763 3599999999999999999
Q ss_pred HHHhhcccCCCCEEEEEccccccccc---CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHH
Q psy2395 441 NAKKKLTKYNIPIKFIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKN 517 (570)
Q Consensus 441 n~~~~~~~~~~~v~~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~ 517 (570)
|+..|+. ..+++|+++|+.+.++. ...+||+|++|||++...... + ......+..++..
T Consensus 259 n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~-------------~---~~~~~~~~~~l~~ 320 (396)
T 2as0_A 259 NAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKD-------------L---KAGLRAYFNVNFA 320 (396)
T ss_dssp HHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGG-------------H---HHHHHHHHHHHHH
T ss_pred HHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHH-------------H---HHHHHHHHHHHHH
Confidence 9998632 22699999999775432 136899999999987533110 0 0122456789999
Q ss_pred HhhccccCeEEEEEEcC
Q psy2395 518 ASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 518 ~~~~LkpgG~l~~~~~~ 534 (570)
+.++|+|||++++....
T Consensus 321 ~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 321 GLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHTTEEEEEEEEEEECC
T ss_pred HHHhcCCCcEEEEEECC
Confidence 99999999998886544
No 127
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.48 E-value=7e-13 Score=127.96 Aligned_cols=135 Identities=17% Similarity=0.137 Sum_probs=102.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc---cccCCCceeE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN---LQNYKKLFNI 473 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD~ 473 (570)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++ .++.+..+|+.+. ......+||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccccccCCCccE
Confidence 5689999999999999999966 36899999999999999877 1256888887553 1122356999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-------------------
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------------------- 534 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------------------- 534 (570)
|+++..+. .. ....+++.+.++|+|||++++....
T Consensus 120 v~~~~~l~-~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (227)
T 3e8s_A 120 ICANFALL-HQ-------------------------DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFA 173 (227)
T ss_dssp EEEESCCC-SS-------------------------CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCT
T ss_pred EEECchhh-hh-------------------------hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhh
Confidence 99987655 21 1267889999999999999986531
Q ss_pred -------------CCHHHHHHHHHHCCCeeEEEEec-CCC----CceEEEEEe
Q psy2395 535 -------------NQSNLVRKLLFKYGFSDIKSWRD-LSG----IERVTQGKI 569 (570)
Q Consensus 535 -------------~~~~~l~~ll~~~Gf~~i~~~~D-~~g----~~R~~~~~~ 569 (570)
...+.+.++|.++||.++.+... ..+ ...++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 174 GFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp TSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEE
T ss_pred ccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeec
Confidence 14688999999999999887652 222 246677765
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=3.3e-13 Score=133.56 Aligned_cols=127 Identities=14% Similarity=0.086 Sum_probs=102.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh-cccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK-LTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..+++...+..+|+++|+|+.+++.|++|+..+ + ..++.+.++|+.+. +...++||+|
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~-~~~~~~~D~v 170 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEA-ELEEAAYDGV 170 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGC-CCCTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhc-CCCCCCcCEE
Confidence 56789999999999999999988323579999999999999999999864 3 24699999999764 2223689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC-CHHHHHHHHHHCCCeeEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN-QSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~l~~ll~~~Gf~~i~ 553 (570)
++|+|.. ..+++.+.+.|+|||.+++..+.. +...+.+.+.+.||..++
T Consensus 171 ~~~~~~~------------------------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 171 ALDLMEP------------------------------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEESSCG------------------------------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEE
T ss_pred EECCcCH------------------------------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEE
Confidence 9987621 356778888999999999988764 666777888889998876
Q ss_pred EEe
Q psy2395 554 SWR 556 (570)
Q Consensus 554 ~~~ 556 (570)
++.
T Consensus 221 ~~~ 223 (258)
T 2pwy_A 221 VLE 223 (258)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 129
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.48 E-value=4.9e-13 Score=136.06 Aligned_cols=180 Identities=16% Similarity=0.231 Sum_probs=118.4
Q ss_pred cCeeeeecCCccccchh----HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHH
Q psy2395 366 YGLVLNITSDVLIPRPE----TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKN 441 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr~~----t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n 441 (570)
+|..+.++..+.++.++ .+.+....+.. .+.+.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++|
T Consensus 56 ~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~-~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~ 133 (296)
T 1inl_A 56 LGVVFALDGITMTTEKDEFMYHEMLAHVPMFL-HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKY 133 (296)
T ss_dssp TEEEEEETTEEEEETTTHHHHHHHHHHHHHHH-SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHH
T ss_pred CcEEEEECCEEeecccchhHHHHHHhHHHHhc-CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHH
Confidence 46777777666666654 24444332222 24567999999999999999997643 57999999999999999999
Q ss_pred HHhhcccC-CCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhh
Q psy2395 442 AKKKLTKY-NIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK 520 (570)
Q Consensus 442 ~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~ 520 (570)
+....... ..+++++++|+.+.+....++||+|++|+|..... |...+ ....+++.+.+
T Consensus 134 ~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~------------~~~~l--------~~~~~l~~~~~ 193 (296)
T 1inl_A 134 LKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAG------------QGGHL--------FTEEFYQACYD 193 (296)
T ss_dssp CHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------------------C--------CSHHHHHHHHH
T ss_pred hHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccC------------chhhh--------hHHHHHHHHHH
Confidence 75411012 45799999999776554457899999998642010 00001 12678889999
Q ss_pred ccccCeEEEEEEcC--CCH---HHHHHHHHHCCCeeEEEEe----cC-CCCceEEEEE
Q psy2395 521 YLVKNGLLLIEHGY--NQS---NLVRKLLFKYGFSDIKSWR----DL-SGIERVTQGK 568 (570)
Q Consensus 521 ~LkpgG~l~~~~~~--~~~---~~l~~ll~~~Gf~~i~~~~----D~-~g~~R~~~~~ 568 (570)
.|+|||++++..+. ... ..+.+.+++. |..+..+. .+ .|..-+++|.
T Consensus 194 ~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~~f~~as 250 (296)
T 1inl_A 194 ALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPITRVYLGFMTTYPSGMWSYTFAS 250 (296)
T ss_dssp HEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEEEEEEECTTSTTSEEEEEEEE
T ss_pred hcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCceEEEEeecCccCCCceEEEEec
Confidence 99999999997643 233 3344555554 66666543 12 3555566665
No 130
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.48 E-value=6.2e-13 Score=136.05 Aligned_cols=129 Identities=10% Similarity=0.071 Sum_probs=102.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++..++ ...+++++++|+.+ ++..+++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLD-TPFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhc-CCCCCCCEeEEE
Confidence 467899999999999999999875 4799999999999999999998753 23469999999965 343357999999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--C------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--N------------------ 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--~------------------ 535 (570)
++..+... ....+++.+.++|+|||++++.... .
T Consensus 191 ~~~~l~~~--------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 3vc1_A 191 NNESTMYV--------------------------DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC 244 (312)
T ss_dssp EESCGGGS--------------------------CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC
T ss_pred ECCchhhC--------------------------CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC
Confidence 96432210 1478999999999999999875421 1
Q ss_pred ---CHHHHHHHHHHCCCeeEEEE
Q psy2395 536 ---QSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 536 ---~~~~l~~ll~~~Gf~~i~~~ 555 (570)
..+.+.++++++||..+.+.
T Consensus 245 ~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 245 NIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp CCCBHHHHHHHHHTTTEEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCEEEEEE
Confidence 24678899999999987665
No 131
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.48 E-value=6.8e-13 Score=145.34 Aligned_cols=172 Identities=18% Similarity=0.247 Sum_probs=118.0
Q ss_pred CCccccchhHHHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcC--CCcEEEEEeCCHHHHHHHHHHHHhhcccCC
Q psy2395 374 SDVLIPRPETELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSK--NKIEIIATDISKFALKIAKKNAKKKLTKYN 450 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~--~~~~V~gvDis~~al~~A~~n~~~~~~~~~ 450 (570)
..+|+|++.++.|++.+.... +.++.+|+|+|||||.+.+.+++... ....++|+|+++.++.+|+.|+..++.. .
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-~ 275 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP-I 275 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC-G
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC-c
Confidence 356789999999999886322 23567999999999999999987742 2468999999999999999999865321 1
Q ss_pred CCEEEEEccccccc-c-cCCCceeEEEECCCCCCCCCcc-cCCCCccccccccccccCCChHHHHHHHHHHhhccc-cCe
Q psy2395 451 IPIKFIKSNWYNNL-Q-NYKKLFNIIVANPPYIPKGDIH-LNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV-KNG 526 (570)
Q Consensus 451 ~~v~~~~~D~~~~l-~-~~~~~fD~Iv~NPPy~~~~~~~-~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk-pgG 526 (570)
.++.+.++|.+... + ....+||+||+||||....... ......+|.+...+.....+ . ..++..+.++|+ |||
T Consensus 276 ~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~--~-~~Fl~~~l~~Lk~~gG 352 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKA--D-FAFLLHGYYHLKQDNG 352 (542)
T ss_dssp GGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCC--H-HHHHHHHHHTBCTTTC
T ss_pred CccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchh--h-HHHHHHHHHHhCCCce
Confidence 25889999987641 2 2246899999999998432111 11111122211001111111 1 258888889999 999
Q ss_pred EEEEEEcCC-----C-HHHHHHHHHHCCC
Q psy2395 527 LLLIEHGYN-----Q-SNLVRKLLFKYGF 549 (570)
Q Consensus 527 ~l~~~~~~~-----~-~~~l~~ll~~~Gf 549 (570)
++.++++.. . ...+++.+.+.+.
T Consensus 353 r~a~VlP~g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 353 VMAIVLPHGVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp EEEEEEETHHHHCCTHHHHHHHHHHHTTC
T ss_pred eEEEEecchHhhCCchhHHHHHHHHhCCc
Confidence 999988753 2 3568888877664
No 132
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=1e-12 Score=128.60 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=100.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc--cCCCcee
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--NYKKLFN 472 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--~~~~~fD 472 (570)
..++.+|||+|||||.++..++....+..+|+|+|+|+.+++...+.+.. ..++.++++|+..... ...++||
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEcccccchhhhccccceE
Confidence 35788999999999999999998764467999999999998666555543 2369999999975432 1236899
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------CCHHHHHH
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----------NQSNLVRK 542 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----------~~~~~l~~ 542 (570)
+|++|.|.. +....+...+.++|||||++++.+.. ........
T Consensus 149 ~I~~d~a~~---------------------------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~ 201 (232)
T 3id6_C 149 VLYVDIAQP---------------------------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVE 201 (232)
T ss_dssp EEEECCCCT---------------------------THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHH
T ss_pred EEEecCCCh---------------------------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHH
Confidence 999986531 01233455666699999999986522 12355677
Q ss_pred HHHHCCCeeEEEEec--CCCCceEEEEEe
Q psy2395 543 LLFKYGFSDIKSWRD--LSGIERVTQGKI 569 (570)
Q Consensus 543 ll~~~Gf~~i~~~~D--~~g~~R~~~~~~ 569 (570)
.|+++||+.++...- +....-+++|++
T Consensus 202 ~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 202 KLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp HHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred HHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 888899998876632 122345666654
No 133
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.48 E-value=2e-13 Score=149.78 Aligned_cols=166 Identities=15% Similarity=0.200 Sum_probs=113.0
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcC--------------CCcEEEEEeCCHHHHHHHH
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSK--------------NKIEIIATDISKFALKIAK 439 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~--------------~~~~V~gvDis~~al~~A~ 439 (570)
..+|+|++.++.|++.+. +.+.+|+|+|||||.+.+.+++... ....++|+|+++.++.+|+
T Consensus 225 G~fyTP~~Vv~lmv~ll~----p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLE----PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TTTCCCHHHHHHHHHHHC----CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHh----cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 456789999999988763 2334999999999999988865431 0358999999999999999
Q ss_pred HHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCcccccccccc--------ccCCChHHH
Q psy2395 440 KNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALT--------DYSNGLSSI 511 (570)
Q Consensus 440 ~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~--------~~~~gl~~~ 511 (570)
.|+..++. ..++.+.++|.+........+||+||+||||....... ......++.... ....+...
T Consensus 301 ~Nl~l~gi--~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~---~~~~~d~r~~~g~~~~~~~~~~~~~~~~- 374 (544)
T 3khk_A 301 MNMVIRGI--DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWH---EKLADDPRWTINTNGEKRILTPPTGNAN- 374 (544)
T ss_dssp HHHHHTTC--CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCC---GGGTTCGGGEECCC--CEECCCCTTCTH-
T ss_pred HHHHHhCC--CcccceeccchhcCcccccccccEEEECCCcCCccccc---hhhhhhhhhhcCcccccccccCCCcchh-
Confidence 99987532 22344588998764333346899999999998643211 111122222210 01111111
Q ss_pred HHHHHHHhhccccCeEEEEEEcCC-------CHHHHHHHHHHCCC
Q psy2395 512 KEIVKNASKYLVKNGLLLIEHGYN-------QSNLVRKLLFKYGF 549 (570)
Q Consensus 512 ~~~l~~~~~~LkpgG~l~~~~~~~-------~~~~l~~ll~~~Gf 549 (570)
..++..+.++|+|||++.++++.. ....+++.+.+.+.
T Consensus 375 ~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 375 FAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc
Confidence 258888889999999999988652 34678888877664
No 134
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=3.4e-13 Score=133.05 Aligned_cols=130 Identities=17% Similarity=0.137 Sum_probs=102.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++.. ..++.++++|+.+ ++...++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~-~~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG-----MPVGKFILASMET-ATLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT-----SSEEEEEESCGGG-CCCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc-----CCceEEEEccHHH-CCCCCCCeEEEE
Confidence 467899999999999999999876 36899999999999999998763 2469999999965 343347899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------------CCHHH
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----------------NQSNL 539 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----------------~~~~~ 539 (570)
++..+...+ -.....+++.+.++|+|||++++..+. ...+.
T Consensus 164 ~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 164 IQWTAIYLT-----------------------DADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIH 220 (254)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHH
T ss_pred EcchhhhCC-----------------------HHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHH
Confidence 964322110 024578999999999999999986531 13578
Q ss_pred HHHHHHHCCCeeEEEEe
Q psy2395 540 VRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 540 l~~ll~~~Gf~~i~~~~ 556 (570)
+.+++.++||..+.+..
T Consensus 221 ~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 221 YKRLFNESGVRVVKEAF 237 (254)
T ss_dssp HHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHCCCEEEEeee
Confidence 99999999999987754
No 135
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.48 E-value=2.6e-13 Score=130.28 Aligned_cols=124 Identities=16% Similarity=0.130 Sum_probs=99.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
+++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++. +.+.++|+... + ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~d~~~~-~-~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRLG---------RPVRTMLFHQL-D-AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHT---------SCCEECCGGGC-C-CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhcC---------CceEEeeeccC-C-CCCcEEEEE
Confidence 45779999999999999999976 3699999999999999998872 56788998653 3 458999999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------CCHHHH
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------------NQSNLV 540 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------------~~~~~l 540 (570)
++..+.... .+....+++.+.+.|+|||++++.++. ...+.+
T Consensus 108 ~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (211)
T 3e23_A 108 AHACLLHVP-----------------------RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWL 164 (211)
T ss_dssp ECSCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHH
T ss_pred ecCchhhcC-----------------------HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHH
Confidence 976543111 124578999999999999999987543 256889
Q ss_pred HHHHHHCC-CeeEEEEe
Q psy2395 541 RKLLFKYG-FSDIKSWR 556 (570)
Q Consensus 541 ~~ll~~~G-f~~i~~~~ 556 (570)
.+++.++| |..+.+..
T Consensus 165 ~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 165 RARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHCCCSEEEEEE
T ss_pred HHHHHhCCCcEEEEEEe
Confidence 99999999 99987664
No 136
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.47 E-value=5.9e-13 Score=126.89 Aligned_cols=131 Identities=16% Similarity=0.213 Sum_probs=94.8
Q ss_pred ccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE
Q psy2395 378 IPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK 457 (570)
Q Consensus 378 ~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~ 457 (570)
.|...+..++..+......++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++|+. ++++++
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~ 101 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCG--------GVNFMV 101 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCT--------TSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcC--------CCEEEE
Confidence 344455666655544333467799999999999999999763 3589999999999999999864 488999
Q ss_pred cccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCH
Q psy2395 458 SNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQS 537 (570)
Q Consensus 458 ~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 537 (570)
+|+.+ ++ ++||+|++||||+.... + ....+++.+.+.+ |.+++.++....
T Consensus 102 ~d~~~-~~---~~~D~v~~~~p~~~~~~---------------------~--~~~~~l~~~~~~~---g~~~~~~~~~~~ 151 (200)
T 1ne2_A 102 ADVSE-IS---GKYDTWIMNPPFGSVVK---------------------H--SDRAFIDKAFETS---MWIYSIGNAKAR 151 (200)
T ss_dssp CCGGG-CC---CCEEEEEECCCC------------------------------CHHHHHHHHHHE---EEEEEEEEGGGH
T ss_pred CcHHH-CC---CCeeEEEECCCchhccC---------------------c--hhHHHHHHHHHhc---CcEEEEEcCchH
Confidence 99966 32 68999999999975321 0 1145677777777 556666666667
Q ss_pred HHHHHHHHHCC
Q psy2395 538 NLVRKLLFKYG 548 (570)
Q Consensus 538 ~~l~~ll~~~G 548 (570)
..+.+.+...|
T Consensus 152 ~~~~~~~~~~g 162 (200)
T 1ne2_A 152 DFLRREFSARG 162 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHCC
Confidence 77888888888
No 137
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=8.3e-13 Score=130.29 Aligned_cols=106 Identities=17% Similarity=0.353 Sum_probs=82.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.. .+.++.++++|+.+. +. .++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~-~~-~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKE----RNLKIEFLQGDVLEI-AF-KNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH----TTCCCEEEESCGGGC-CC-CSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHh----cCCceEEEECChhhc-cc-CCCccEEE
Confidence 45679999999999999999976 36899999999999999999876 344799999999763 22 36899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
++..... + -..+....+++.+.++|+|||.+++.+
T Consensus 111 ~~~~~~~------------~----------~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIM------------Y----------FDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGG------------G----------SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCchh------------c----------CCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 8421110 0 011345788999999999999998753
No 138
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=8.3e-13 Score=133.29 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=86.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
..++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++++...+ ...++.++++|+.+.....+++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccCCCCCcCEE
Confidence 4577899999999999999988764 3599999999999999999987532 22469999999976321134789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
+++..++.. -........+++.+.++|+|||++++.++
T Consensus 138 ~~~~~l~~~---------------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYA---------------------FSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGG---------------------GSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhh---------------------cCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 996432110 01224567899999999999999998653
No 139
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=1e-13 Score=135.95 Aligned_cols=138 Identities=15% Similarity=0.101 Sum_probs=97.0
Q ss_pred HHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-cc
Q psy2395 388 DLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-QN 466 (570)
Q Consensus 388 ~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-~~ 466 (570)
..+......++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++++.. .+.++.++++|+.+.. +.
T Consensus 51 ~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~~~~~ 124 (236)
T 1zx0_A 51 HALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPR----QTHKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGG----CSSEEEEEESCHHHHGGGS
T ss_pred HHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHh----cCCCeEEEecCHHHhhccc
Confidence 33333334567899999999999999997644 35899999999999999998875 3457999999996642 33
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC----------C
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN----------Q 536 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~ 536 (570)
.+++||+|++| .|.... + .........+++++.++|||||++++..... .
T Consensus 125 ~~~~fD~V~~d-~~~~~~------------~-------~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 184 (236)
T 1zx0_A 125 PDGHFDGILYD-TYPLSE------------E-------TWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSD 184 (236)
T ss_dssp CTTCEEEEEEC-CCCCBG------------G-------GTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSC
T ss_pred CCCceEEEEEC-Ccccch------------h-------hhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhh
Confidence 34789999995 111000 0 0012345678999999999999998642111 1
Q ss_pred -----HHHHHHHHHHCCCee
Q psy2395 537 -----SNLVRKLLFKYGFSD 551 (570)
Q Consensus 537 -----~~~l~~ll~~~Gf~~ 551 (570)
.+.....+.++||..
T Consensus 185 ~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 185 ITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp HHHHHHHHTHHHHHHTTCCG
T ss_pred hhhhccHHHHHHHHHCCCCC
Confidence 134456788899983
No 140
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.46 E-value=3.7e-13 Score=129.41 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=93.9
Q ss_pred cchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEc
Q psy2395 379 PRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKS 458 (570)
Q Consensus 379 pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~ 458 (570)
+.+.+..++..+.... ++.+|||+|||+|..++.++...+.+.+|+++|+|+.+++.|++|+...+ ...+++++++
T Consensus 40 ~~~~~~~~l~~l~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~ 115 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIK--QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVG 115 (210)
T ss_dssp CCHHHHHHHHHHHHHH--CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEES
T ss_pred cCHHHHHHHHHHHHhh--CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEe
Confidence 4455666666655432 46799999999999999999876546899999999999999999998653 2346999999
Q ss_pred ccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 459 NWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 459 D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
|+.+.++...+ ||+|+++.+. ..+..+++.+.++|+|||++++.
T Consensus 116 d~~~~~~~~~~-fD~v~~~~~~----------------------------~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 116 DPLGIAAGQRD-IDILFMDCDV----------------------------FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp CHHHHHTTCCS-EEEEEEETTT----------------------------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cHHHHhccCCC-CCEEEEcCCh----------------------------hhhHHHHHHHHHhcCCCeEEEEE
Confidence 99775554446 9999997431 13468899999999999999874
No 141
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.46 E-value=1.5e-12 Score=126.60 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=100.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~~~~fD~ 473 (570)
.++.+|||+|||+|.++..++...++..+|+|+|+|+.+++.+++|+.. . .+++++++|+.+.. ....++||+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~----~-~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE----R-RNIVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS----C-TTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc----c-CCCEEEEccCCCcchhhcccCCceE
Confidence 4677999999999999999998753347999999999999999999874 2 56999999997632 222368999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC-----------HHHHHH
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ-----------SNLVRK 542 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~l~~ 542 (570)
|++|+|.. .....++..+.++|+|||++++.+.... ..++..
T Consensus 147 v~~~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (227)
T 1g8a_A 147 IFEDVAQP---------------------------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERE 199 (227)
T ss_dssp EEECCCST---------------------------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHH
T ss_pred EEECCCCH---------------------------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHH
Confidence 99998711 1224558899999999999988653211 134444
Q ss_pred HHHHCCCeeEEEEecCCC--C-ceEEEEEe
Q psy2395 543 LLFKYGFSDIKSWRDLSG--I-ERVTQGKI 569 (570)
Q Consensus 543 ll~~~Gf~~i~~~~D~~g--~-~R~~~~~~ 569 (570)
+ .+. |..++... +.. . .-++++++
T Consensus 200 l-~~~-f~~~~~~~-~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 200 L-SEY-FEVIERLN-LEPYEKDHALFVVRK 226 (227)
T ss_dssp H-HTT-SEEEEEEE-CTTTSSSEEEEEEEC
T ss_pred H-Hhh-ceeeeEec-cCcccCCCEEEEEEe
Confidence 4 666 98876653 322 2 33566654
No 142
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=2.7e-13 Score=131.61 Aligned_cols=119 Identities=22% Similarity=0.269 Sum_probs=93.0
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.++...+++.+|+|+|+|+.+++.|++++..++ ...+++++++|+
T Consensus 50 ~~~~~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 125 (225)
T 3tr6_A 50 PEQAQLLALLVKL--MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPA 125 (225)
T ss_dssp HHHHHHHHHHHHH--HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCH
T ss_pred HHHHHHHHHHHHh--hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCH
Confidence 4444555555443 256799999999999999999876546899999999999999999998753 234599999999
Q ss_pred ccccccCC-----CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 461 YNNLQNYK-----KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 461 ~~~l~~~~-----~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
.+.++... ++||+|+++++. ..+..+++.+.++|+|||++++.
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~----------------------------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADK----------------------------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCG----------------------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhhhccCCCCccEEEECCCH----------------------------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 76544322 689999998752 13567888999999999999874
No 143
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.46 E-value=8e-13 Score=138.68 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=87.4
Q ss_pred eeeeecCCccccc--hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy2395 368 LVLNITSDVLIPR--PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK 445 (570)
Q Consensus 368 ~~~~v~~~~~~pr--~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~ 445 (570)
+.|.++|+.|.+. ..++.++.++++.....+.+|||+|||+|.+++.+|+.. .+|+|+|+|+.|++.|++|+..|
T Consensus 182 ~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~n 258 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAAN 258 (369)
T ss_dssp CEEEEETTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHc
Confidence 6788889888776 456788888887654446789999999999999998643 68999999999999999999976
Q ss_pred cccCCCCEEEEEcccccccccCC---------------CceeEEEECCCCC
Q psy2395 446 LTKYNIPIKFIKSNWYNNLQNYK---------------KLFNIIVANPPYI 481 (570)
Q Consensus 446 ~~~~~~~v~~~~~D~~~~l~~~~---------------~~fD~Iv~NPPy~ 481 (570)
+. .+++|+++|+.+.++... .+||+|++|||+.
T Consensus 259 g~---~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 259 HI---DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS 306 (369)
T ss_dssp TC---CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT
T ss_pred CC---CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc
Confidence 32 369999999976543211 2799999999975
No 144
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=3e-12 Score=123.62 Aligned_cols=128 Identities=16% Similarity=0.074 Sum_probs=93.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~~~~fD~ 473 (570)
.++.+|||+|||||.++..++...+ ..+|+|+|+|+.|++.+.++++. ..++.++.+|+.... ....++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-----RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-----CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-----CCCeEEEEcCCCCchhhcccccceeE
Confidence 5678999999999999999998875 57999999999999877777664 235889999986531 112378999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC------CCHHHHH----HH
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------NQSNLVR----KL 543 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------~~~~~l~----~l 543 (570)
|++|.+.. .....++.++.++|||||++++.+.. ...+.+. +.
T Consensus 130 V~~~~~~~---------------------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 182 (210)
T 1nt2_A 130 IYQDIAQK---------------------------NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKE 182 (210)
T ss_dssp EEECCCST---------------------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHH
T ss_pred EEEeccCh---------------------------hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHH
Confidence 99984211 12245688999999999999987521 1223332 23
Q ss_pred HHHCCCeeEEEEec
Q psy2395 544 LFKYGFSDIKSWRD 557 (570)
Q Consensus 544 l~~~Gf~~i~~~~D 557 (570)
++++ |..++....
T Consensus 183 l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 183 MEGD-FKIVKHGSL 195 (210)
T ss_dssp HHTT-SEEEEEEEC
T ss_pred HHhh-cEEeeeecC
Confidence 7777 998877653
No 145
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.46 E-value=2e-13 Score=138.58 Aligned_cols=148 Identities=16% Similarity=0.288 Sum_probs=100.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc----------------------------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK---------------------------- 448 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~---------------------------- 448 (570)
++.+|||+|||+|.+++.++..++ ..+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999875 579999999999999999987643211
Q ss_pred ---------------------------CCCCEEEEEccccccc----ccCCCceeEEEECCCCCCCCCcccCCCCccccc
Q psy2395 449 ---------------------------YNIPIKFIKSNWYNNL----QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEP 497 (570)
Q Consensus 449 ---------------------------~~~~v~~~~~D~~~~l----~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep 497 (570)
...+++|+++|+.... +...++||+|+|+.... |
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~-------------~-- 189 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTK-------------W-- 189 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHH-------------H--
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHH-------------H--
Confidence 0146999999997533 12347899999954310 0
Q ss_pred cccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC----------------------CHHHHHHHHHH--CCCeeEE
Q psy2395 498 INALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN----------------------QSNLVRKLLFK--YGFSDIK 553 (570)
Q Consensus 498 ~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------~~~~l~~ll~~--~Gf~~i~ 553 (570)
+.-..+.+....+++.+.++|+|||+|+++.... ..+.+..+|.+ +||+.++
T Consensus 190 ----ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~ 265 (292)
T 3g07_A 190 ----VHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYE 265 (292)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEE
T ss_pred ----hhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEE
Confidence 0000012356789999999999999999874321 13457778888 8998887
Q ss_pred EEec----CCCCceE
Q psy2395 554 SWRD----LSGIERV 564 (570)
Q Consensus 554 ~~~D----~~g~~R~ 564 (570)
+... ..|..|.
T Consensus 266 ~~~~~~~~~~g~~r~ 280 (292)
T 3g07_A 266 LVATPHNTSKGFQRP 280 (292)
T ss_dssp EC-----------CC
T ss_pred EeccCCCCCCCccce
Confidence 7654 3455553
No 146
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.46 E-value=7.6e-13 Score=127.70 Aligned_cols=136 Identities=14% Similarity=0.160 Sum_probs=101.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++. .++.++++|+.+. +.. ++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~-~~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSF-EVP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSC-CCC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhc-CCC-CCeEEEEE
Confidence 6779999999999999999976 3699999999999999998764 3488999999763 333 78999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC---------------------
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN--------------------- 535 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~--------------------- 535 (570)
+..+...++ .....+++.+.+.|+|||.+++..+..
T Consensus 113 ~~~l~~~~~-----------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
T 3hnr_A 113 TYAFHHLTD-----------------------DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQL 169 (220)
T ss_dssp ESCGGGSCH-----------------------HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHH
T ss_pred CcchhcCCh-----------------------HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccc
Confidence 754332110 112348899999999999999874321
Q ss_pred ----------CHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 536 ----------QSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 536 ----------~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
..+.+.++++++||.++.+.. .+..-++.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~--~~~~w~~~~~~ 211 (220)
T 3hnr_A 170 ANDLQTEYYTRIPVMQTIFENNGFHVTFTRL--NHFVWVMEATK 211 (220)
T ss_dssp HHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC--SSSEEEEEEEE
T ss_pred hhhcchhhcCCHHHHHHHHHHCCCEEEEeec--cceEEEEeehh
Confidence 246788999999998765543 35555555544
No 147
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=9.8e-13 Score=132.41 Aligned_cols=150 Identities=15% Similarity=0.169 Sum_probs=105.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc-CCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK-YNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
+.+.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++|+...... ...+++++.+|+.+.+....++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 4568999999999999999987643 579999999999999999997542111 23579999999987665445789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--CCH---HHHHHHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--NQS---NLVRKLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~---~~l~~ll~~~Gf 549 (570)
++|+|+..... ..+ ....+++.+.+.|+|||++++..+. ... ..+.+.+++. |
T Consensus 153 i~d~~~~~~~~-------------~~l--------~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F 210 (275)
T 1iy9_A 153 MVDSTEPVGPA-------------VNL--------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-F 210 (275)
T ss_dssp EESCSSCCSCC-------------CCC--------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-C
T ss_pred EECCCCCCCcc-------------hhh--------hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-C
Confidence 99987632110 001 1156788888999999999987643 233 3344555554 7
Q ss_pred eeEEEEec----C-CCCceEEEEE
Q psy2395 550 SDIKSWRD----L-SGIERVTQGK 568 (570)
Q Consensus 550 ~~i~~~~D----~-~g~~R~~~~~ 568 (570)
..+..+.- + .|..-++++.
T Consensus 211 ~~v~~~~~~vp~~~~g~w~~~~as 234 (275)
T 1iy9_A 211 PITKLYTANIPTYPSGLWTFTIGS 234 (275)
T ss_dssp SEEEEEEECCTTSGGGCEEEEEEE
T ss_pred CCeEEEEEecCcccCcceEEEEee
Confidence 77766542 1 3455566665
No 148
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.45 E-value=9.5e-13 Score=127.12 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=95.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC--CCCEEEEEcccccccccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY--NIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~--~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
.++.+|||+|||+|.++..++..++ ..+|+|+|+|+.+++.|++++..++... ..+++++++|+.. .+...++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY-RDKRFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS-CCGGGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc-cccccCCCCE
Confidence 3577999999999999999998764 4799999999999999999987542110 1169999999844 3333478999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-------------------
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY------------------- 534 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~------------------- 534 (570)
|+++-.+...+ ......+++.+.+.|+|||.++.....
T Consensus 106 V~~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 3jwg_A 106 ATVIEVIEHLD-----------------------ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDH 162 (219)
T ss_dssp EEEESCGGGCC-----------------------HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCC
T ss_pred EEEHHHHHhCC-----------------------HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCc
Confidence 99964332111 123468999999999999976654321
Q ss_pred ---CCHHHHH----HHHHHCCCeeE
Q psy2395 535 ---NQSNLVR----KLLFKYGFSDI 552 (570)
Q Consensus 535 ---~~~~~l~----~ll~~~Gf~~i 552 (570)
...+++. .++.++||.+.
T Consensus 163 ~~~~~~~~l~~~~~~l~~~~Gf~v~ 187 (219)
T 3jwg_A 163 RFEWTRKEFQTWAVKVAEKYGYSVR 187 (219)
T ss_dssp TTSBCHHHHHHHHHHHHHHHTEEEE
T ss_pred eeeecHHHHHHHHHHHHHHCCcEEE
Confidence 0344555 77888999653
No 149
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.45 E-value=5.9e-13 Score=129.44 Aligned_cols=139 Identities=19% Similarity=0.276 Sum_probs=100.2
Q ss_pred cccCeeeeecCCccccchhHHHH-HHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcC----CCcEEEEEeCCHHHHHHH
Q psy2395 364 EFYGLVLNITSDVLIPRPETELL-VDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSK----NKIEIIATDISKFALKIA 438 (570)
Q Consensus 364 ~f~~~~~~v~~~~~~pr~~t~~l-~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~----~~~~V~gvDis~~al~~A 438 (570)
.|++..+.+..+..++.|..... ++.+.. ...++.+|||+|||+|.++..+++... +..+|+|+|+++.+++.|
T Consensus 47 ~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a 125 (227)
T 2pbf_A 47 PYIDTPVYISHGVTISAPHMHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFS 125 (227)
T ss_dssp TTSSSCEEEETTEEECCHHHHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHH
T ss_pred cCCCCccccCCCCccCChHHHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHH
Confidence 45566666677777777654433 333321 235678999999999999999998763 346999999999999999
Q ss_pred HHHHHhhccc--CCCCEEEEEcccccccc---cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHH
Q psy2395 439 KKNAKKKLTK--YNIPIKFIKSNWYNNLQ---NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKE 513 (570)
Q Consensus 439 ~~n~~~~~~~--~~~~v~~~~~D~~~~l~---~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~ 513 (570)
++|+..++.. ...+++++++|+.+..+ ...++||+|++++++..
T Consensus 126 ~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~------------------------------- 174 (227)
T 2pbf_A 126 LENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE------------------------------- 174 (227)
T ss_dssp HHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS-------------------------------
T ss_pred HHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHH-------------------------------
Confidence 9999864210 02469999999977431 12368999999876431
Q ss_pred HHHHHhhccccCeEEEEEEcC
Q psy2395 514 IVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 514 ~l~~~~~~LkpgG~l~~~~~~ 534 (570)
+++.+.+.|+|||++++.++.
T Consensus 175 ~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 175 LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEcc
Confidence 124667799999999998765
No 150
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.45 E-value=2.7e-13 Score=145.82 Aligned_cols=163 Identities=17% Similarity=0.196 Sum_probs=110.0
Q ss_pred ccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcC------------CCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 376 VLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSK------------NKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 376 ~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~------------~~~~V~gvDis~~al~~A~~n~~ 443 (570)
+|+|++..+.+++.+. +.++.+|||+|||||.+++.+++... ...+++|+|+++.+++.|+.|+.
T Consensus 153 fyTP~~v~~~mv~~l~---~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 153 YFTPRPLIQAMVDCIN---PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp GCCCHHHHHHHHHHHC---CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHhC---CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 4678888888777652 34567999999999999999886531 13579999999999999999998
Q ss_pred hhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc
Q psy2395 444 KKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV 523 (570)
Q Consensus 444 ~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk 523 (570)
.++... .++.+.++|.+..... .+||+|++||||......... ..+.+. .. . .+ .....+++.+.++|+
T Consensus 230 l~g~~~-~~~~i~~gD~l~~~~~--~~fD~Iv~NPPf~~~~~~~~~--~~~~~~--~~-~--~~-~~~~~fl~~~~~~Lk 298 (445)
T 2okc_A 230 LHGIGT-DRSPIVCEDSLEKEPS--TLVDVILANPPFGTRPAGSVD--INRPDF--YV-E--TK-NNQLNFLQHMMLMLK 298 (445)
T ss_dssp HTTCCS-SCCSEEECCTTTSCCS--SCEEEEEECCCSSCCCTTCCC--CCCTTS--SS-C--CS-CHHHHHHHHHHHHEE
T ss_pred HhCCCc-CCCCEeeCCCCCCccc--CCcCEEEECCCCCCcccccch--hhHhhc--CC-C--Cc-chHHHHHHHHHHHhc
Confidence 653210 1578999998764332 589999999999865432110 001000 01 1 11 123477888889999
Q ss_pred cCeEEEEEEcCC------CHHHHHHHH-HHCCCeeE
Q psy2395 524 KNGLLLIEHGYN------QSNLVRKLL-FKYGFSDI 552 (570)
Q Consensus 524 pgG~l~~~~~~~------~~~~l~~ll-~~~Gf~~i 552 (570)
|||+++++++.. ....+++.+ +..++..+
T Consensus 299 ~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~~i 334 (445)
T 2okc_A 299 TGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLHTI 334 (445)
T ss_dssp EEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEEEE
T ss_pred cCCEEEEEECCcccccCcHHHHHHHHHHhcCcEEEE
Confidence 999999887542 345677644 44444433
No 151
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.45 E-value=1.7e-12 Score=130.80 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=104.7
Q ss_pred HHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 385 LLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 385 ~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+++.++..+ ..++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...+++++.+|+.+
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~- 125 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSE--NLRSKRVLLAGWEQ- 125 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCC--CCSCEEEEESCGGG-
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcC--CCCCeEEEECChhh-
Confidence 3445555443 2467799999999999999999665 3599999999999999999987532 23469999999854
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------- 534 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------- 534 (570)
++ ++||+|+++..+...+ ......+++.+.++|+|||++++....
T Consensus 126 ~~---~~fD~v~~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 179 (287)
T 1kpg_A 126 FD---EPVDRIVSIGAFEHFG-----------------------HERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHE 179 (287)
T ss_dssp CC---CCCSEEEEESCGGGTC-----------------------TTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTT
T ss_pred CC---CCeeEEEEeCchhhcC-----------------------hHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccc
Confidence 33 7899999964332110 023478899999999999999884321
Q ss_pred --------------------------CCHHHHHHHHHHCCCeeEEEE
Q psy2395 535 --------------------------NQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 535 --------------------------~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
...+.+.+++.++||..+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 226 (287)
T 1kpg_A 180 RGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQ 226 (287)
T ss_dssp TTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEE
T ss_pred ccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEE
Confidence 135677888999999988765
No 152
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=4.5e-13 Score=132.72 Aligned_cols=121 Identities=16% Similarity=0.186 Sum_probs=95.0
Q ss_pred chhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 380 RPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 380 r~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
.+....++..+... .++.+|||+|||+|+.++.+++..+++.+|+++|+|+.+++.|++|+...+ ...+++++++|
T Consensus 64 ~~~~~~ll~~l~~~--~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~i~~~~gd 139 (247)
T 1sui_A 64 SADEGQFLSMLLKL--INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--VDHKIDFREGP 139 (247)
T ss_dssp CHHHHHHHHHHHHH--TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--CGGGEEEEESC
T ss_pred CHHHHHHHHHHHHh--hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECC
Confidence 35556666665553 256799999999999999999987656899999999999999999998743 23469999999
Q ss_pred cccccccC------CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 460 WYNNLQNY------KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 460 ~~~~l~~~------~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
+.+.++.. .++||+|+++.+. ..+..+++.+.++|+|||++++..
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~~----------------------------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDADK----------------------------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSCS----------------------------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCch----------------------------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 97754432 4789999997531 134678888999999999998753
No 153
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.44 E-value=9.6e-13 Score=129.13 Aligned_cols=93 Identities=19% Similarity=0.236 Sum_probs=74.5
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
...+...+... .++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|++|+..++ ...+++++++|+.+
T Consensus 66 ~~~l~~~~~~~--~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~ 138 (241)
T 3gdh_A 66 AEHIAGRVSQS--FKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLL 138 (241)
T ss_dssp HHHHHHHHHHH--SCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHH
T ss_pred HHHHHHHhhhc--cCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHH
Confidence 45555555433 257899999999999999999764 799999999999999999998742 12369999999977
Q ss_pred ccccCCCceeEEEECCCCCCCC
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKG 484 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~ 484 (570)
..+ .++||+|++||||....
T Consensus 139 ~~~--~~~~D~v~~~~~~~~~~ 158 (241)
T 3gdh_A 139 LAS--FLKADVVFLSPPWGGPD 158 (241)
T ss_dssp HGG--GCCCSEEEECCCCSSGG
T ss_pred hcc--cCCCCEEEECCCcCCcc
Confidence 543 37899999999998644
No 154
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.44 E-value=4.7e-13 Score=131.38 Aligned_cols=124 Identities=18% Similarity=0.189 Sum_probs=96.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-ccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-QNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-~~~~~~fD~I 474 (570)
+++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++ +.++++|+.+.+ +..+++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEE
Confidence 466899999999999999998764 5799999999999988755 568889987643 3335799999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC-------------------
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN------------------- 535 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~------------------- 535 (570)
+++-.+...+ ...+..+++.+.++|+|||++++.++..
T Consensus 106 ~~~~~l~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
T 3dli_A 106 MISHFVEHLD-----------------------PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPV 162 (240)
T ss_dssp EEESCGGGSC-----------------------GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCC
T ss_pred EECCchhhCC-----------------------cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccC
Confidence 9964322110 1235789999999999999999876432
Q ss_pred CHHHHHHHHHHCCCeeEEEEe
Q psy2395 536 QSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 536 ~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
....+..++.++||..+.+..
T Consensus 163 ~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 163 HPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp CHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEE
Confidence 246789999999999877654
No 155
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=3.5e-13 Score=132.54 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=98.1
Q ss_pred hhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc-cCCCc
Q psy2395 392 KKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ-NYKKL 470 (570)
Q Consensus 392 ~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~ 470 (570)
.....++.+|||||||+|..+..+++.. ..+|+|||+||.+++.|++++.. .+.++.++.+|+..... ..+++
T Consensus 55 ~~~~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 55 AAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPR----QTHKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp HHHTTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGG----CSSEEEEEESCHHHHGGGSCTTC
T ss_pred HhhccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhh----CCCceEEEeehHHhhcccccccC
Confidence 3334678899999999999999998765 36899999999999999999875 45678999999865432 33478
Q ss_pred eeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc----------CCC----
Q psy2395 471 FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG----------YNQ---- 536 (570)
Q Consensus 471 fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~----------~~~---- 536 (570)
||.|+.++...... .........+++++.++|||||+|++... +..
T Consensus 129 FD~i~~D~~~~~~~--------------------~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~ 188 (236)
T 3orh_A 129 FDGILYDTYPLSEE--------------------TWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIM 188 (236)
T ss_dssp EEEEEECCCCCBGG--------------------GTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHH
T ss_pred CceEEEeeeecccc--------------------hhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhh
Confidence 99999986432111 01223567899999999999999987320 111
Q ss_pred -HHHHHHHHHHCCCee
Q psy2395 537 -SNLVRKLLFKYGFSD 551 (570)
Q Consensus 537 -~~~l~~ll~~~Gf~~ 551 (570)
.+.....|.++||..
T Consensus 189 ~~~~~~~~L~eaGF~~ 204 (236)
T 3orh_A 189 FEETQVPALLEAGFRR 204 (236)
T ss_dssp HHHHTHHHHHHHTCCG
T ss_pred hHHHHHHHHHHcCCeE
Confidence 233455677889975
No 156
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.43 E-value=8.2e-13 Score=129.12 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=94.3
Q ss_pred ccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE
Q psy2395 378 IPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK 457 (570)
Q Consensus 378 ~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~ 457 (570)
++.+....++..++.. .++.+|||+|||+|..+..+++..+ +.+|+++|+|+.+++.|++++..++ ...++.+++
T Consensus 37 ~~~~~~~~~l~~~~~~--~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~ 111 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKM--AAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALG--LESRIELLF 111 (233)
T ss_dssp CCCHHHHHHHHHHHHH--HCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEEC
T ss_pred CcCHHHHHHHHHHHhc--cCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEE
Confidence 3445555444444432 2567999999999999999999875 5899999999999999999998743 234699999
Q ss_pred cccccccccC--CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 458 SNWYNNLQNY--KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 458 ~D~~~~l~~~--~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+|+.+.++.. .++||+|++++|.. .+..+++.+.+.|+|||++++.
T Consensus 112 ~d~~~~~~~~~~~~~fD~I~~~~~~~----------------------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 112 GDALQLGEKLELYPLFDVLFIDAAKG----------------------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp SCGGGSHHHHTTSCCEEEEEEEGGGS----------------------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHHHHHHhcccCCCccEEEECCCHH----------------------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9997754433 46899999986531 2468889999999999999885
No 157
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.43 E-value=1.4e-13 Score=135.92 Aligned_cols=119 Identities=21% Similarity=0.293 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.+|+..+++++|+|+|+|+.+++.|++|+..++ ...+++++++|+
T Consensus 46 ~~~~~~l~~l~~~--~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda 121 (242)
T 3r3h_A 46 PEQAQFMQMLIRL--TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPA 121 (242)
T ss_dssp HHHHHHHHHHHHH--HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCH
T ss_pred HHHHHHHHHHHhh--cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCH
Confidence 4445555555443 256799999999999999999887656899999999999999999998753 334799999999
Q ss_pred ccccccC-----CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 461 YNNLQNY-----KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 461 ~~~l~~~-----~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
.+.++.. .++||+|+++.+. ..+..+++.+.++|+|||++++.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~----------------------------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADK----------------------------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCG----------------------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhhccCCCCEeEEEEcCCh----------------------------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 7755432 3789999997641 23467888999999999999884
No 158
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=9e-13 Score=129.58 Aligned_cols=136 Identities=12% Similarity=0.096 Sum_probs=95.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc---cCCCCEEEEEcccccccc--cCCCc
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT---KYNIPIKFIKSNWYNNLQ--NYKKL 470 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~---~~~~~v~~~~~D~~~~l~--~~~~~ 470 (570)
.++.+|||||||+|.+++.+|...+ +..|+|+|+|+.+++.|++++..... ....++.++++|+.+.++ ...++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3566899999999999999998875 58999999999999999998764210 012369999999976444 33578
Q ss_pred eeEEEECCC--CCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC-CHHHHHHHHHHC
Q psy2395 471 FNIIVANPP--YIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN-QSNLVRKLLFKY 547 (570)
Q Consensus 471 fD~Iv~NPP--y~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~l~~ll~~~ 547 (570)
||.|+++.| +.... +.. ..-....+++.+.++|+|||.+++.+... ....+.+.+...
T Consensus 124 ~D~v~~~~~dp~~k~~----------h~k---------rr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRT----------KHK---------WRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp EEEEEEESCC------------------------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred eeEEEEeCCCchhhhh----------hhh---------hhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 999998743 21100 000 00012578999999999999999887653 345566667777
Q ss_pred C-Cee
Q psy2395 548 G-FSD 551 (570)
Q Consensus 548 G-f~~ 551 (570)
| |..
T Consensus 185 ~~f~~ 189 (235)
T 3ckk_A 185 PLFER 189 (235)
T ss_dssp TTEEE
T ss_pred CCccc
Confidence 6 543
No 159
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.43 E-value=3.6e-13 Score=147.97 Aligned_cols=161 Identities=14% Similarity=0.125 Sum_probs=111.4
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCC-----------------CcEEEEEeCCHHHHH
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKN-----------------KIEIIATDISKFALK 436 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~-----------------~~~V~gvDis~~al~ 436 (570)
..+|+|++....|++.+. +.++.+|+|+|||||.+++.+++.... ...++|+|+++.++.
T Consensus 149 G~fyTP~~iv~~mv~~l~---p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLK---PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp -CCCCCHHHHHHHHHHHC---CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred CeeeCCHHHHHHHHHHhc---cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 457889988888887662 345679999999999999988865311 137999999999999
Q ss_pred HHHHHHHhhcccCC--CCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHH
Q psy2395 437 IAKKNAKKKLTKYN--IPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEI 514 (570)
Q Consensus 437 ~A~~n~~~~~~~~~--~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~ 514 (570)
.|+.|+..++.... .++.+.++|.+........+||+|++||||....... .. ..|. ...+ .....+
T Consensus 226 lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~-~~--~~~~-------~~~~-~~~~~F 294 (541)
T 2ar0_A 226 LALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTN-IT--RTFV-------HPTS-NKQLCF 294 (541)
T ss_dssp HHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCC-CC--SCCS-------SCCS-CHHHHH
T ss_pred HHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchh-hH--hhcC-------CCCC-chHHHH
Confidence 99999986432110 1277899998764333346899999999998654332 00 0111 0111 123478
Q ss_pred HHHHhhccccCeEEEEEEcCC------CHHHHHHHHHHCC
Q psy2395 515 VKNASKYLVKNGLLLIEHGYN------QSNLVRKLLFKYG 548 (570)
Q Consensus 515 l~~~~~~LkpgG~l~~~~~~~------~~~~l~~ll~~~G 548 (570)
+..+.++|+|||+++++++.. ....+++.|.+.+
T Consensus 295 l~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~ 334 (541)
T 2ar0_A 295 MQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC 334 (541)
T ss_dssp HHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE
T ss_pred HHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC
Confidence 888899999999999887642 2456777776644
No 160
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.43 E-value=1.7e-12 Score=123.60 Aligned_cols=123 Identities=21% Similarity=0.187 Sum_probs=96.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++ +|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++..+ +.++.++++|+.+. +..+++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~-~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEK----GVKITTVQSNLADF-DIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHH----TCCEEEECCBTTTB-SCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhc----CCceEEEEcChhhc-CCCcCCccEEEE
Confidence 45 9999999999999999865 369999999999999999998763 34799999999663 333478999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----------------CCHHH
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-----------------NQSNL 539 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-----------------~~~~~ 539 (570)
+..+.+ ......+++.+.+.|+|||.+++.... ...++
T Consensus 101 ~~~~~~-------------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
T 2kw5_A 101 IFCHLP-------------------------SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLET 155 (202)
T ss_dssp ECCCCC-------------------------HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHH
T ss_pred EhhcCC-------------------------HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHH
Confidence 643221 134578999999999999999986521 23567
Q ss_pred HHHHHHHCCCeeEEEE
Q psy2395 540 VRKLLFKYGFSDIKSW 555 (570)
Q Consensus 540 l~~ll~~~Gf~~i~~~ 555 (570)
+.+++. ||.++.+.
T Consensus 156 l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 156 LQSELP--SLNWLIAN 169 (202)
T ss_dssp HHHHCS--SSCEEEEE
T ss_pred HHHHhc--CceEEEEE
Confidence 888887 99987644
No 161
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.43 E-value=8.3e-13 Score=128.95 Aligned_cols=137 Identities=17% Similarity=0.115 Sum_probs=95.3
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCC-HHHHHHH---HHHHHhhcccCCCCEEEEEcccccccccCCCc
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDIS-KFALKIA---KKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKL 470 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis-~~al~~A---~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 470 (570)
..++.+|||+|||+|.++..+++..+ +.+|+|+|+| +.+++.| ++++...+ -.++.|+++|+.+......+.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCGGGTTC
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhhhccCe
Confidence 34677999999999999999997655 6899999999 6666666 77766531 236999999996542222367
Q ss_pred eeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC---------------
Q psy2395 471 FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN--------------- 535 (570)
Q Consensus 471 fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~--------------- 535 (570)
+|.|++|+|+.... + .. ......++.++.++|||||.+++.+...
T Consensus 98 v~~i~~~~~~~~~~-----------~---~~------~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~ 157 (225)
T 3p2e_A 98 ADSISILFPWGTLL-----------E---YV------IKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPL 157 (225)
T ss_dssp EEEEEEESCCHHHH-----------H---HH------HTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------
T ss_pred EEEEEEeCCCcHHh-----------h---hh------hcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCC
Confidence 99999998853200 0 00 0012467899999999999998832111
Q ss_pred -CHH-----HHHHHHHHCCCeeEEEE
Q psy2395 536 -QSN-----LVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 536 -~~~-----~l~~ll~~~Gf~~i~~~ 555 (570)
... ++...+.++||.++.+.
T Consensus 158 ~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 158 LSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred CChhhcchHHHHHHHHHcCCCeeeee
Confidence 111 37778889999876543
No 162
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.43 E-value=9.2e-13 Score=131.50 Aligned_cols=138 Identities=16% Similarity=0.124 Sum_probs=97.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC--------------------------
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY-------------------------- 449 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~-------------------------- 449 (570)
.++.+|||+|||+|.+++.++..+ ..+|+|+|+|+.|++.|++++..+....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 356799999999998887766543 2479999999999999999876421000
Q ss_pred CCCEE-EEEccccccccc---CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccC
Q psy2395 450 NIPIK-FIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKN 525 (570)
Q Consensus 450 ~~~v~-~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkpg 525 (570)
..++. ++++|+.+..+. ..++||+|+++--++. -....+.+..+++++.++||||
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~---------------------i~~~~~~~~~~l~~i~r~LKPG 190 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMEC---------------------ACCSLDAYRAALCNLASLLKPG 190 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH---------------------HCSSHHHHHHHHHHHHTTEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHH---------------------hcCCHHHHHHHHHHHHHHcCCC
Confidence 01244 899999774331 1368999999632110 0011245678999999999999
Q ss_pred eEEEEEEc--C--------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 526 GLLLIEHG--Y--------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 526 G~l~~~~~--~--------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
|+|++... . ...+.+.++|.++||..+.+..
T Consensus 191 G~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 191 GHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp EEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 99988531 1 2467899999999999877654
No 163
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.43 E-value=1.4e-12 Score=127.64 Aligned_cols=127 Identities=12% Similarity=0.158 Sum_probs=99.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+++... .++.++++|+.+ ++...++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~-~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGPD------TGITYERADLDK-LHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGG-CCCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhh-ccCCCCCceEEE
Confidence 357799999999999999999764 23999999999999999987642 258999999965 333357899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++.++...+ ....+++.+.+.|+|||.+++..+.
T Consensus 113 ~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (243)
T 3bkw_A 113 SSLALHYVE-------------------------DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTW 167 (243)
T ss_dssp EESCGGGCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEE
T ss_pred Eeccccccc-------------------------hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEE
Confidence 975533111 2368899999999999999885421
Q ss_pred ------------------------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 ------------------------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 ------------------------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
...+.+.++|.++||..+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 168 PIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp EECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred eecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 1357788999999999988764
No 164
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.43 E-value=1.9e-12 Score=136.19 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=92.6
Q ss_pred chhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCC-------------------------------------
Q psy2395 380 RPETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKN------------------------------------- 421 (570)
Q Consensus 380 r~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~------------------------------------- 421 (570)
.|..+.+...++.... .++..|+|++||||.+++.+|.....
T Consensus 176 Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 255 (384)
T 3ldg_A 176 APIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDI 255 (384)
T ss_dssp CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccC
Confidence 3444556665554422 45678999999999999998876531
Q ss_pred CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccc
Q psy2395 422 KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501 (570)
Q Consensus 422 ~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al 501 (570)
..+|+|+|+|+.|++.|++|+..++ ....++|.++|+.+... ..+||+|++||||...-..
T Consensus 256 ~~~v~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~--------------- 316 (384)
T 3ldg_A 256 QLDISGFDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLD--------------- 316 (384)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSC---------------
T ss_pred CceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCc--cCCcCEEEECCchhhccCC---------------
Confidence 1469999999999999999999753 33469999999977433 2589999999999743110
Q ss_pred cccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCH
Q psy2395 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQS 537 (570)
Q Consensus 502 ~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 537 (570)
..+-..+|..+.+.+.. -+||.+++.++....
T Consensus 317 --~~~l~~ly~~lg~~lk~--~~g~~~~iit~~~~l 348 (384)
T 3ldg_A 317 --DKAVDILYNEMGETFAP--LKTWSQFILTNDTDF 348 (384)
T ss_dssp --HHHHHHHHHHHHHHHTT--CTTSEEEEEESCTTH
T ss_pred --HHHHHHHHHHHHHHHhh--CCCcEEEEEECCHHH
Confidence 00001233433333322 359999998886553
No 165
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=4.8e-12 Score=123.42 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=108.3
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
..+.+.+.... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++.. ++.++++|+.+.
T Consensus 28 ~~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~--------~~~~~~~d~~~~ 95 (239)
T 3bxo_A 28 SDIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRLP--------DATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHCT--------TCEEEECCTTTC
T ss_pred HHHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhCC--------CCEEEECCHHHc
Confidence 34445554433 567899999999999999999876 389999999999999988742 378999999663
Q ss_pred cccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc---------
Q psy2395 464 LQNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG--------- 533 (570)
Q Consensus 464 l~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~--------- 533 (570)
+. .++||+|+|.. .+. | -...+....+++.+.+.|+|||.+++...
T Consensus 96 -~~-~~~~D~v~~~~~~~~-------------~---------~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 151 (239)
T 3bxo_A 96 -RL-GRKFSAVVSMFSSVG-------------Y---------LKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADG 151 (239)
T ss_dssp -CC-SSCEEEEEECTTGGG-------------G---------CCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTT
T ss_pred -cc-CCCCcEEEEcCchHh-------------h---------cCCHHHHHHHHHHHHHhcCCCeEEEEEeccCccccccc
Confidence 32 47899999621 111 0 00113457899999999999999988421
Q ss_pred ----------------------------------------------------CCCHHHHHHHHHHCCCeeEEEEecCCCC
Q psy2395 534 ----------------------------------------------------YNQSNLVRKLLFKYGFSDIKSWRDLSGI 561 (570)
Q Consensus 534 ----------------------------------------------------~~~~~~l~~ll~~~Gf~~i~~~~D~~g~ 561 (570)
....+++.++|+++||.++.+..+ .+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~-~~~ 230 (239)
T 3bxo_A 152 WVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGG-PSG 230 (239)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTS
T ss_pred ceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcC-CCC
Confidence 012478999999999976655444 445
Q ss_pred ceEEEEEeC
Q psy2395 562 ERVTQGKIS 570 (570)
Q Consensus 562 ~R~~~~~~~ 570 (570)
.-+++|+++
T Consensus 231 ~~~~va~K~ 239 (239)
T 3bxo_A 231 RGLFVGVPA 239 (239)
T ss_dssp SCEEEEEEC
T ss_pred ceEEEEecC
Confidence 567777763
No 166
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.42 E-value=1.4e-12 Score=131.65 Aligned_cols=116 Identities=19% Similarity=0.230 Sum_probs=84.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc-CCCCEEEEEcccccccc--cCCCcee
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK-YNIPIKFIKSNWYNNLQ--NYKKLFN 472 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~-~~~~v~~~~~D~~~~l~--~~~~~fD 472 (570)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++...... ...++.+..+|+.+... ...++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 356799999999999999999764 59999999999999999987542110 11258899999865320 2347899
Q ss_pred EEEEC-CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 473 IIVAN-PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 473 ~Iv~N-PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
+|+++ ..+....+ .....+....+++.+.++|+|||++++.+
T Consensus 133 ~V~~~g~~l~~~~~------------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHLPD------------------SKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGSCC------------------SSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCc------------------cccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99996 33321110 00112456889999999999999999754
No 167
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.42 E-value=5.6e-13 Score=128.77 Aligned_cols=138 Identities=14% Similarity=0.112 Sum_probs=95.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC-CCEEEEEcccccccccCCCceeE
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYN-IPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~-~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
..++.+|||+|||+|.++..++..++ +.+|+|+|+|+.|++.+.+++..+....+ .++.++++|+.+ ++...+. |.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~ 101 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GE 101 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CE
Confidence 34678999999999999999999875 68999999999998865444432111122 269999999966 4443455 88
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC---------------C--
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN---------------Q-- 536 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------~-- 536 (570)
|+...||..... .+ +.....+++++.++|||||.+++.++.. .
T Consensus 102 v~~~~~~~~~~~--------~~------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (218)
T 3mq2_A 102 LHVLMPWGSLLR--------GV------------LGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPD 161 (218)
T ss_dssp EEEESCCHHHHH--------HH------------HTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHH
T ss_pred EEEEccchhhhh--------hh------------hccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchH
Confidence 887655421000 00 0011578889999999999999865321 1
Q ss_pred --HHHHHHHHHHCCCeeEEEE
Q psy2395 537 --SNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 537 --~~~l~~ll~~~Gf~~i~~~ 555 (570)
.+.+..++.++||.+..+.
T Consensus 162 ~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 162 SADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp HHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCceeee
Confidence 2347778999999886653
No 168
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.42 E-value=1.5e-12 Score=131.30 Aligned_cols=125 Identities=14% Similarity=0.226 Sum_probs=97.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..+ +.+++++++|+.+... .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKE----NLNISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHc----CCceEEEEeccccccc--cCCccEEEE
Confidence 67899999999999999999763 59999999999999999999874 3479999999976433 578999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC--------------CHHHHHH
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN--------------QSNLVRK 542 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~--------------~~~~l~~ 542 (570)
++++...+ ......+++.+.++|+|||.+++..... ....+.+
T Consensus 191 ~~~~~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (286)
T 3m70_A 191 TVVFMFLN-----------------------RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKE 247 (286)
T ss_dssp CSSGGGSC-----------------------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHH
T ss_pred ccchhhCC-----------------------HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHH
Confidence 88764221 0234689999999999999987754211 2456777
Q ss_pred HHHHCCCeeEEEE
Q psy2395 543 LLFKYGFSDIKSW 555 (570)
Q Consensus 543 ll~~~Gf~~i~~~ 555 (570)
++.. |..+...
T Consensus 248 ~~~~--~~~~~~~ 258 (286)
T 3m70_A 248 YYKD--WEFLEYN 258 (286)
T ss_dssp HTTT--SEEEEEE
T ss_pred HhcC--CEEEEEE
Confidence 7754 8776654
No 169
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.42 E-value=4.8e-12 Score=130.35 Aligned_cols=145 Identities=14% Similarity=0.181 Sum_probs=110.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++..+ +.+++++|++ .+++.|++++...+ ...+++++.+|+.+. +. ...||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~-~~-~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEV-DY-GNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTS-CC-CSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccC-CC-CCCCcEEE
Confidence 4668999999999999999998875 5799999999 99999999987642 233699999999763 22 24599999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++-+.+.. .......+++.+.+.|+|||++++....
T Consensus 238 ~~~~l~~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 294 (335)
T 2r3s_A 238 LPNFLHHF-----------------------DVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLAT 294 (335)
T ss_dssp EESCGGGS-----------------------CHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHH
T ss_pred EcchhccC-----------------------CHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHee
Confidence 95332211 1124578999999999999988764311
Q ss_pred ------CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEeC
Q psy2395 535 ------NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKIS 570 (570)
Q Consensus 535 ------~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~~ 570 (570)
...+++.+++.++||..+++. +..+..+++.++++
T Consensus 295 ~~~~~~~t~~~~~~ll~~aGf~~~~~~-~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 295 TPNGDAYTFAEYESMFSNAGFSHSQLH-SLPTTQQQVIVAYK 335 (335)
T ss_dssp SSSCCCCCHHHHHHHHHHTTCSEEEEE-CCTTSSSEEEEEEC
T ss_pred CCCCCcCCHHHHHHHHHHCCCCeeeEE-ECCCCceeEEEecC
Confidence 125678899999999998875 56677788888764
No 170
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.41 E-value=1.4e-12 Score=133.67 Aligned_cols=165 Identities=18% Similarity=0.214 Sum_probs=109.1
Q ss_pred cCeeeeecCCccccchh----HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHH
Q psy2395 366 YGLVLNITSDVLIPRPE----TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKN 441 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr~~----t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n 441 (570)
++..+.++..+.++.++ ++.++...+.. .+++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|+++
T Consensus 74 ~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~-~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~ 151 (314)
T 2b2c_A 74 YGNVLVLDGIVQATERDEFSYQEMLAHLPMFA-HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKF 151 (314)
T ss_dssp TEEEEEETTEEEEESSSSSHHHHHHHHHHHHH-SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCEeecCCcchhHHHHHHHHHHHhh-CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHH
Confidence 35666676666555543 44444433322 24567999999999999999997643 57999999999999999999
Q ss_pred HHhhcccC-CCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH-HHHHHHHh
Q psy2395 442 AKKKLTKY-NIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI-KEIVKNAS 519 (570)
Q Consensus 442 ~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~-~~~l~~~~ 519 (570)
+....... ..+++++.+|+.+.+....++||+|++|++.... |. ...+ ..+++.+.
T Consensus 152 ~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~-------------~~---------~~l~t~~~l~~~~ 209 (314)
T 2b2c_A 152 LPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVG-------------PA---------ESLFGQSYYELLR 209 (314)
T ss_dssp CTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------------------------------HHHHHH
T ss_pred HHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCC-------------cc---------hhhhHHHHHHHHH
Confidence 86421011 4579999999977655445789999999852110 00 0122 67888999
Q ss_pred hccccCeEEEEEEcC--CCHH---HHHHHHHHCCCeeEEEE
Q psy2395 520 KYLVKNGLLLIEHGY--NQSN---LVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 520 ~~LkpgG~l~~~~~~--~~~~---~l~~ll~~~Gf~~i~~~ 555 (570)
+.|+|||++++..+. .... .+.+.+++. |..+..+
T Consensus 210 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v~~~ 249 (314)
T 2b2c_A 210 DALKEDGILSSQGESVWLHLPLIAHLVAFNRKI-FPAVTYA 249 (314)
T ss_dssp HHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSEEEEE
T ss_pred hhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH-CCcceEE
Confidence 999999999987643 2333 334444443 6665544
No 171
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.41 E-value=5.4e-12 Score=130.24 Aligned_cols=183 Identities=14% Similarity=0.163 Sum_probs=123.7
Q ss_pred CCceeecCc-ccccCeeeeecCCccccchhHHHHHHHHHhhc--CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeC
Q psy2395 354 EPIAYIIGK-KEFYGLVLNITSDVLIPRPETELLVDLIVKKT--FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDI 430 (570)
Q Consensus 354 ~p~~~i~g~-~~f~~~~~~v~~~~~~pr~~t~~l~~~~~~~~--~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDi 430 (570)
.|.|+|.-. ...+|..+.++....+...+ ....+.+.... .+++.+||++|||+|.++..+++.. ..+|++||+
T Consensus 143 S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEI 219 (364)
T 2qfm_A 143 SPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLK--PKMVTMVEI 219 (364)
T ss_dssp CSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTC--CSEEEEEES
T ss_pred CCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCC--CCEEEEEEC
Confidence 566777653 34457777777777776666 34444443221 1357899999999999999998775 379999999
Q ss_pred CHHHHHHHHHHHHhhcc-cCC----CCEEEEEccccccccc---CCCceeEEEECCCCCCCCCcccCCCCcccccccccc
Q psy2395 431 SKFALKIAKKNAKKKLT-KYN----IPIKFIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALT 502 (570)
Q Consensus 431 s~~al~~A~~n~~~~~~-~~~----~~v~~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~ 502 (570)
|+.+++.|++|+..... ... .+++++.+|+++.+.. ..++||+||+|||.++... .|.. +
T Consensus 220 D~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~----------~p~~-L- 287 (364)
T 2qfm_A 220 DQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST----------SPEE-D- 287 (364)
T ss_dssp CHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC----------C------
T ss_pred CHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCc----------Cchh-h-
Confidence 99999999999753210 011 2699999999887653 2478999999997633210 1100 1
Q ss_pred ccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHH---CCCeeEEE
Q psy2395 503 DYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFK---YGFSDIKS 554 (570)
Q Consensus 503 ~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~---~Gf~~i~~ 554 (570)
...++|+.+++.+.+.|+|||++++..+.....++...+++ .-|..+.+
T Consensus 288 ---~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 288 ---STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp ---CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred ---hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 12367777777789999999999987765544554454443 34666655
No 172
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.41 E-value=4.2e-12 Score=121.90 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=95.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++ . ...+++++++|+.+. ...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~---~----~~~~~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGR---H----GLDNVEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGG---G----CCTTEEEEECCTTSC--CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHh---c----CCCCeEEEecccccC--CCCCceeEEE
Confidence 456799999999999999999873 699999999999999987 1 224699999999775 3357999999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc----------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---------------------- 533 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---------------------- 533 (570)
++..+...+ -.....+++.+.++|+|||.+++...
T Consensus 113 ~~~~l~~~~-----------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (218)
T 3ou2_A 113 FAHWLAHVP-----------------------DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRT 169 (218)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEE
T ss_pred EechhhcCC-----------------------HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeee
Confidence 964322110 12347889999999999999987532
Q ss_pred ------------CCCHHHHHHHHHHCCCeeE
Q psy2395 534 ------------YNQSNLVRKLLFKYGFSDI 552 (570)
Q Consensus 534 ------------~~~~~~l~~ll~~~Gf~~i 552 (570)
....+.+.++++++||.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 170 LQDGRSFRIVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp CTTSCEEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred cCCcchhhHhhcCCCHHHHHHHHHHCCCEEE
Confidence 1245789999999999943
No 173
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.41 E-value=3.5e-13 Score=150.26 Aligned_cols=173 Identities=11% Similarity=0.029 Sum_probs=113.1
Q ss_pred CCccccchhHHHHHHHHHhhcC---CCCCEEEEECCcccHHHHHHHHhcC--CCcEEEEEeCCHHHHHHH--HHHHHhhc
Q psy2395 374 SDVLIPRPETELLVDLIVKKTF---EKKIKLLEMGTGSGAIAIAIAIYSK--NKIEIIATDISKFALKIA--KKNAKKKL 446 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~---~~~~~VLDlGcGtG~i~l~la~~~~--~~~~V~gvDis~~al~~A--~~n~~~~~ 446 (570)
..+++|++....|+..+..... .++.+|||+|||||.+++.+++..+ ...+++|+|+++.+++.| +.|+..+.
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4567888888888877322222 3577999999999999999998763 135799999999999999 77765432
Q ss_pred ccCCCC-EEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCc--cc---cccccccccCCChHHHHHHHHHHhh
Q psy2395 447 TKYNIP-IKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDL--RF---EPINALTDYSNGLSSIKEIVKNASK 520 (570)
Q Consensus 447 ~~~~~~-v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~--~~---ep~~al~~~~~gl~~~~~~l~~~~~ 520 (570)
...+.. ..+...|++........+||+||+||||............. ++ .|... ..+.+..+.+..|++.+.+
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p-~s~~G~~DLy~aFIe~Al~ 453 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRP-QTLFGQIGVEALFLELVTE 453 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCC-SSCSSSCCHHHHHHHHHHH
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccc-cccccccchHHHHHHHHHH
Confidence 212222 35666777653222236899999999997532211000000 00 00000 0112345678889999999
Q ss_pred ccccCeEEEEEEcCCC-------HHHHHHHHHHC
Q psy2395 521 YLVKNGLLLIEHGYNQ-------SNLVRKLLFKY 547 (570)
Q Consensus 521 ~LkpgG~l~~~~~~~~-------~~~l~~ll~~~ 547 (570)
+|++||+++++++..- ...+++.+.+.
T Consensus 454 lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~ 487 (878)
T 3s1s_A 454 LVQDGTVISAIMPKQYLTAQGNESKAFREFLVGN 487 (878)
T ss_dssp HSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTT
T ss_pred hcCCCcEEEEEEChHHhccCChHHHHHHHHHHhC
Confidence 9999999999887632 45677776654
No 174
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.41 E-value=1.2e-12 Score=127.44 Aligned_cols=119 Identities=14% Similarity=0.169 Sum_probs=91.7
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.+++..+.+.+|+++|+|+.+++.|++++..++ ...+++++++|+
T Consensus 55 ~~~~~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~ 130 (229)
T 2avd_A 55 CEQAQLLANLARL--IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--AEHKIDLRLKPA 130 (229)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--CTTTEEEEESCH
T ss_pred HHHHHHHHHHHHh--cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCCeEEEEEcCH
Confidence 4444444444443 356799999999999999999876546899999999999999999998753 234799999998
Q ss_pred ccccccC--C---CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 461 YNNLQNY--K---KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 461 ~~~l~~~--~---~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
.+.++.. . ++||+|++|+|.. .+..+++.+.++|+|||++++.
T Consensus 131 ~~~~~~~~~~~~~~~~D~v~~d~~~~----------------------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 131 LETLDELLAAGEAGTFDVAVVDADKE----------------------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSCST----------------------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCccEEEECCCHH----------------------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 7654321 1 5899999987621 3467888899999999999884
No 175
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.41 E-value=1.8e-12 Score=136.96 Aligned_cols=136 Identities=22% Similarity=0.235 Sum_probs=93.0
Q ss_pred chhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCC-------------------------------------
Q psy2395 380 RPETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKN------------------------------------- 421 (570)
Q Consensus 380 r~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~------------------------------------- 421 (570)
.|..+.+...++.... .++..|||+|||||.+++.+|.....
T Consensus 183 Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 183 APIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp CSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 3444556666555432 45678999999999999998876531
Q ss_pred CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccc
Q psy2395 422 KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501 (570)
Q Consensus 422 ~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al 501 (570)
..+|+|+|+|+.|++.|+.|+..++ ...+++|.++|+.+... ..+||+|++||||...-..
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~--------------- 323 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQT--EDEYGVVVANPPYGERLED--------------- 323 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHH---------------
T ss_pred CceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCC--CCCCCEEEECCCCccccCC---------------
Confidence 1469999999999999999999753 23359999999977433 3589999999999743100
Q ss_pred cccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHH
Q psy2395 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSN 538 (570)
Q Consensus 502 ~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 538 (570)
..+-..+|..+-+.+.. -+||.+++.++.....
T Consensus 324 --~~~l~~ly~~lg~~lk~--~~g~~~~iit~~~~l~ 356 (393)
T 3k0b_A 324 --EEAVRQLYREMGIVYKR--MPTWSVYVLTSYELFE 356 (393)
T ss_dssp --HHHHHHHHHHHHHHHHT--CTTCEEEEEECCTTHH
T ss_pred --chhHHHHHHHHHHHHhc--CCCCEEEEEECCHHHH
Confidence 00001233443333332 3599999988865533
No 176
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.8e-12 Score=131.58 Aligned_cols=118 Identities=19% Similarity=0.150 Sum_probs=90.9
Q ss_pred HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 385 LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 385 ~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
.+.+.+......++.+|||+|||+|.++..+++..++..+|+|+|+|+.+++.|++++..+. ....+++|+++|+.+.
T Consensus 24 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~v~~~~~d~~~~- 101 (299)
T 3g5t_A 24 DFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP-DTYKNVSFKISSSDDF- 101 (299)
T ss_dssp HHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCC-
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-CCCCceEEEEcCHHhC-
Confidence 34455555545578899999999999999999865336899999999999999999988630 0245799999999663
Q ss_pred ccCC------CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 465 QNYK------KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 465 ~~~~------~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+... ++||+|+++..++.. ....+++.+.++|+|||.+++
T Consensus 102 ~~~~~~~~~~~~fD~V~~~~~l~~~--------------------------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAVECAHWF--------------------------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEESCGGGS--------------------------CHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccccCCCeeEEeHhhHHHHh--------------------------CHHHHHHHHHHhcCCCcEEEE
Confidence 3333 689999997543211 236889999999999999977
No 177
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.40 E-value=1.4e-12 Score=128.21 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
+....++..+... .++.+|||+|||+|..++.+++..+++.+|+++|+|+.+++.|++|+...+ ...+++++++|+
T Consensus 56 ~~~~~~l~~l~~~--~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda 131 (237)
T 3c3y_A 56 PLAGQLMSFVLKL--VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--VEHKINFIESDA 131 (237)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHh--hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCH
Confidence 4555555555443 256799999999999999999987656899999999999999999998743 233699999999
Q ss_pred ccccccC------CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 461 YNNLQNY------KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 461 ~~~l~~~------~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.+.++.. .++||+|+++.+. ..+..+++.+.++|+|||++++..
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~----------------------------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADK----------------------------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCG----------------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhccCCCCCcCEEEECCch----------------------------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 7754422 4689999997431 235788899999999999998853
No 178
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.40 E-value=1.8e-12 Score=119.95 Aligned_cols=130 Identities=14% Similarity=0.126 Sum_probs=97.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++. .+++++.+| .+..+++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~--------~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF--------DSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC--------TTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC--------CCcEEEeCC----CCCCCCceEEEE
Confidence 466799999999999999999765 49999999999999999882 248899999 233347899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-------------CCHHHHHH
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-------------NQSNLVRK 542 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-------------~~~~~l~~ 542 (570)
++..+...+ ....+++.+.+.|+|||++++.... ...+.+.+
T Consensus 81 ~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (170)
T 3i9f_A 81 FANSFHDMD-------------------------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMG 135 (170)
T ss_dssp EESCSTTCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHH
T ss_pred Eccchhccc-------------------------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHH
Confidence 986554221 2368899999999999999885421 13567888
Q ss_pred HHHHCCCeeEEEEecCCCCceEEEEE
Q psy2395 543 LLFKYGFSDIKSWRDLSGIERVTQGK 568 (570)
Q Consensus 543 ll~~~Gf~~i~~~~D~~g~~R~~~~~ 568 (570)
++. ||..++... .....-.+++.
T Consensus 136 ~l~--Gf~~~~~~~-~~~~~~~l~~~ 158 (170)
T 3i9f_A 136 WFS--NFVVEKRFN-PTPYHFGLVLK 158 (170)
T ss_dssp HTT--TEEEEEEEC-SSTTEEEEEEE
T ss_pred HHh--CcEEEEccC-CCCceEEEEEe
Confidence 887 999887654 34444444443
No 179
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.40 E-value=2.7e-12 Score=121.43 Aligned_cols=127 Identities=14% Similarity=0.142 Sum_probs=96.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++..++ ..++.++++|+.+. +. .++||+|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~-~~-~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNL-TF-DRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGC-CC-CCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhC-CC-CCCceEEEE
Confidence 5679999999999999999976 3699999999999999999987642 12599999999663 33 578999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--------------CCHHHHHH
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------NQSNLVRK 542 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------~~~~~l~~ 542 (570)
+.++...+ .+....+++.+.+.|+|||++++.... ...+++.+
T Consensus 104 ~~~l~~~~-----------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 160 (199)
T 2xvm_A 104 TVVLMFLE-----------------------AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRR 160 (199)
T ss_dssp ESCGGGSC-----------------------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHH
T ss_pred cchhhhCC-----------------------HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHH
Confidence 86543211 113478899999999999998764311 13567788
Q ss_pred HHHHCCCeeEEEEe
Q psy2395 543 LLFKYGFSDIKSWR 556 (570)
Q Consensus 543 ll~~~Gf~~i~~~~ 556 (570)
++.. |..+....
T Consensus 161 ~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 161 YYEG--WERVKYNE 172 (199)
T ss_dssp HTTT--SEEEEEEC
T ss_pred HhcC--CeEEEecc
Confidence 8865 88776543
No 180
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=1.6e-12 Score=134.48 Aligned_cols=142 Identities=15% Similarity=0.122 Sum_probs=96.8
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhc-------c-cCCCCEE
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKL-------T-KYNIPIK 454 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~-------~-~~~~~v~ 454 (570)
+..++..+ ...++.+|||+|||+|.++..+++...+..+|+|+|+++.+++.|++|+...+ . ....+++
T Consensus 94 ~~~~l~~l---~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 94 INMILSMM---DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHH---TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHhc---CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 44444443 23567899999999999999999874335799999999999999999988531 0 0124699
Q ss_pred EEEcccccccc-cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 455 FIKSNWYNNLQ-NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 455 ~~~~D~~~~l~-~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
++++|+.+... ...++||+|++|+|.. ..++..+.+.|+|||.+++..+
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~~~~~------------------------------~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALDMLNP------------------------------HVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp EEESCTTCCC-------EEEEEECSSST------------------------------TTTHHHHGGGEEEEEEEEEEES
T ss_pred EEECChHHcccccCCCCeeEEEECCCCH------------------------------HHHHHHHHHhcCCCcEEEEEeC
Confidence 99999977532 2235799999987521 1256788899999999998766
Q ss_pred C-CCHHHHHHHHHH--CCCeeEEEEec
Q psy2395 534 Y-NQSNLVRKLLFK--YGFSDIKSWRD 557 (570)
Q Consensus 534 ~-~~~~~l~~ll~~--~Gf~~i~~~~D 557 (570)
. .+...+.+.+.+ .+|....+...
T Consensus 221 ~~~~~~~~~~~l~~~~~~~~~~~~~~~ 247 (336)
T 2b25_A 221 NITQVIELLDGIRTCELALSCEKISEV 247 (336)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred CHHHHHHHHHHHHhcCCCcccceEEEe
Confidence 4 233444454544 34554444433
No 181
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.40 E-value=1.1e-12 Score=138.10 Aligned_cols=133 Identities=26% Similarity=0.277 Sum_probs=92.9
Q ss_pred hhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCC-------------------------------------C
Q psy2395 381 PETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKN-------------------------------------K 422 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~-------------------------------------~ 422 (570)
|..+.+...++.... .++.+|||+|||||.+++.+|..... .
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 344556666655432 45679999999999999999876421 1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCcccccccccc
Q psy2395 423 IEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALT 502 (570)
Q Consensus 423 ~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~ 502 (570)
.+|+|+|+|+.|++.|+.|+..++ ....++|.++|+.+... ..+||+||+||||...-..
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~g--l~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~---------------- 317 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAG--VDEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLED---------------- 317 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHH----------------
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhcCc--CCCCcEEEECCCCcCccCC----------------
Confidence 579999999999999999999863 23369999999977433 3689999999999743100
Q ss_pred ccCCChHHHHHHHHHHhhccc--cCeEEEEEEcCCCHH
Q psy2395 503 DYSNGLSSIKEIVKNASKYLV--KNGLLLIEHGYNQSN 538 (570)
Q Consensus 503 ~~~~gl~~~~~~l~~~~~~Lk--pgG~l~~~~~~~~~~ 538 (570)
......+...+.+.|+ +||.+++.++.....
T Consensus 318 -----~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l~ 350 (385)
T 3ldu_A 318 -----KDSVKQLYKELGYAFRKLKNWSYYLITSYEDFE 350 (385)
T ss_dssp -----HHHHHHHHHHHHHHHHTSBSCEEEEEESCTTHH
T ss_pred -----HHHHHHHHHHHHHHHhhCCCCEEEEEECCHHHH
Confidence 0112233333333444 589998888865543
No 182
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.40 E-value=2e-12 Score=124.54 Aligned_cols=105 Identities=19% Similarity=0.231 Sum_probs=84.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++.. ..+++++++|+.+.. ..++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKR-----WSHISWAATDILQFS--TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTT-----CSSEEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhccc-----CCCeEEEEcchhhCC--CCCCccEEE
Confidence 456799999999999999998764 6899999999999999999874 237999999997654 357999999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
++..+.... ..+.+..+++.+.++|+|||.+++..
T Consensus 120 ~~~~l~~~~----------------------~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 120 VAEVLYYLE----------------------DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EESCGGGSS----------------------SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EccHHHhCC----------------------CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 975543211 12345688999999999999999865
No 183
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=4.1e-12 Score=128.26 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=104.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh--ccc------CCCCEEEEEcccccccccC
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK--LTK------YNIPIKFIKSNWYNNLQNY 467 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~--~~~------~~~~v~~~~~D~~~~l~~~ 467 (570)
+++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++ .. +.. ...+++++.+|+.+.+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45679999999999999999977 4 579999999999999999998 32 100 235799999998765544
Q ss_pred CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--CCHHHH---HH
Q psy2395 468 KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--NQSNLV---RK 542 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~l---~~ 542 (570)
.++||+|++|+|+.... ..++ +...+++.+.+.|+|||++++..+. ...+.+ .+
T Consensus 150 ~~~fD~Ii~d~~~~~~~--------------------~~~l-~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~ 208 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGP--------------------AKVL-FSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYK 208 (281)
T ss_dssp CCCEEEEEEECCCCC-------------------------T-TSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHH
T ss_pred cCCeeEEEECCCCCCCc--------------------chhh-hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHH
Confidence 57899999998753110 0000 1267888999999999999986533 344433 33
Q ss_pred HHHHCCCeeEEEEe----cCCCCceEEEEEe
Q psy2395 543 LLFKYGFSDIKSWR----DLSGIERVTQGKI 569 (570)
Q Consensus 543 ll~~~Gf~~i~~~~----D~~g~~R~~~~~~ 569 (570)
.+++. |..+..+. ...|...+++|..
T Consensus 209 ~l~~~-f~~v~~~~~~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 209 EMKKV-FDRVYYYSFPVIGYASPWAFLVGVK 238 (281)
T ss_dssp HHHHH-CSEEEEEEECCTTSSSSEEEEEEEE
T ss_pred HHHHH-CCceEEEEEecCCCCceEEEEEeeC
Confidence 44443 76666543 3457777888764
No 184
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=4.1e-12 Score=129.59 Aligned_cols=149 Identities=10% Similarity=0.093 Sum_probs=103.9
Q ss_pred HHHHHHHHHh---hcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEc
Q psy2395 383 TELLVDLIVK---KTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKS 458 (570)
Q Consensus 383 t~~l~~~~~~---~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~ 458 (570)
.+.|+..+.. ... .++.+|||||||+|.++..+++..+ +.+|++||+|+.+++.|++++... ...+++++++
T Consensus 71 ~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~ 146 (317)
T 3gjy_A 71 MRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIP---RAPRVKIRVD 146 (317)
T ss_dssp HHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEES
T ss_pred HHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhcccc---CCCceEEEEC
Confidence 4555555543 122 2234999999999999999998766 579999999999999999998642 2457999999
Q ss_pred ccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CC
Q psy2395 459 NWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQ 536 (570)
Q Consensus 459 D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~ 536 (570)
|+.+.+... .++||+|++|.+..... | ..+ ....+++.+.+.|+|||++++..+. ..
T Consensus 147 Da~~~l~~~~~~~fDvIi~D~~~~~~~------------~-~~L--------~t~efl~~~~r~LkpgGvlv~~~~~~~~ 205 (317)
T 3gjy_A 147 DARMVAESFTPASRDVIIRDVFAGAIT------------P-QNF--------TTVEFFEHCHRGLAPGGLYVANCGDHSD 205 (317)
T ss_dssp CHHHHHHTCCTTCEEEEEECCSTTSCC------------C-GGG--------SBHHHHHHHHHHEEEEEEEEEEEEECTT
T ss_pred cHHHHHhhccCCCCCEEEECCCCcccc------------c-hhh--------hHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 998765432 47899999985422110 0 000 1167888999999999999886643 22
Q ss_pred H---HHHHHHHHHCCCeeEEEEec
Q psy2395 537 S---NLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 537 ~---~~l~~ll~~~Gf~~i~~~~D 557 (570)
. ..+.+.+.+. |..+.++.+
T Consensus 206 ~~~~~~~~~tL~~v-F~~v~~~~~ 228 (317)
T 3gjy_A 206 LRGAKSELAGMMEV-FEHVAVIAD 228 (317)
T ss_dssp CHHHHHHHHHHHHH-CSEEEEEEC
T ss_pred hHHHHHHHHHHHHH-CCceEEEEe
Confidence 1 2344455443 777777764
No 185
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.40 E-value=9e-13 Score=129.65 Aligned_cols=140 Identities=14% Similarity=0.128 Sum_probs=102.2
Q ss_pred Cccccc-hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHh---cCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC
Q psy2395 375 DVLIPR-PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIY---SKNKIEIIATDISKFALKIAKKNAKKKLTKYN 450 (570)
Q Consensus 375 ~~~~pr-~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~---~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~ 450 (570)
+..+++ |++..++..++... ++.+|||+|||+|+++..+++. ..++++|+|+|+|+.+++.|+ . ..
T Consensus 60 ~~~~~~~p~~~~~l~~~l~~~--~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~---~-----~~ 129 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLWEL--RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA---S-----DM 129 (236)
T ss_dssp TEECCSCHHHHHHHHHHHHHH--CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG---G-----GC
T ss_pred cccccCCHHHHHHHHHHHHhc--CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh---c-----cC
Confidence 455666 87777776666543 4579999999999999999987 223689999999999999887 1 23
Q ss_pred CCEEEEEcccccc--cccCC-CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhh-ccccCe
Q psy2395 451 IPIKFIKSNWYNN--LQNYK-KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK-YLVKNG 526 (570)
Q Consensus 451 ~~v~~~~~D~~~~--l~~~~-~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~-~LkpgG 526 (570)
.+++++++|+.+. ++... .+||+|+++... ..+..++..+.+ +|+|||
T Consensus 130 ~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~----------------------------~~~~~~l~~~~r~~LkpGG 181 (236)
T 2bm8_A 130 ENITLHQGDCSDLTTFEHLREMAHPLIFIDNAH----------------------------ANTFNIMKWAVDHLLEEGD 181 (236)
T ss_dssp TTEEEEECCSSCSGGGGGGSSSCSSEEEEESSC----------------------------SSHHHHHHHHHHHTCCTTC
T ss_pred CceEEEECcchhHHHHHhhccCCCCEEEECCch----------------------------HhHHHHHHHHHHhhCCCCC
Confidence 4699999999764 33323 379999986431 023678888886 999999
Q ss_pred EEEEEE-----cCCCHHHHHHHHHHC--CCeeE
Q psy2395 527 LLLIEH-----GYNQSNLVRKLLFKY--GFSDI 552 (570)
Q Consensus 527 ~l~~~~-----~~~~~~~l~~ll~~~--Gf~~i 552 (570)
++++.. .......+.+++++. +|...
T Consensus 182 ~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 182 YFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred EEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 999843 112334788888877 56543
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.39 E-value=3e-12 Score=128.50 Aligned_cols=131 Identities=17% Similarity=0.191 Sum_probs=100.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh-cccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK-LTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..+++...+..+|+++|+|+.+++.|++|+..+ + ....+++++++|+.+. +...++||+|
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-~~~~~v~~~~~d~~~~-~~~~~~~D~v 175 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-QPPDNWRLVVSDLADS-ELPDGSVDRA 175 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-SCCTTEEEECSCGGGC-CCCTTCEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCCcEEEEECchHhc-CCCCCceeEE
Confidence 56789999999999999999986433579999999999999999999763 1 0124699999999764 2224689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHHHHHHHHHH-CCCeeE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSNLVRKLLFK-YGFSDI 552 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~l~~ll~~-~Gf~~i 552 (570)
++|+|.. ..+++.+.+.|+|||++++.++. .+...+...+.+ .+|..+
T Consensus 176 ~~~~~~~------------------------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 176 VLDMLAP------------------------------WEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp EEESSCG------------------------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCC
T ss_pred EECCcCH------------------------------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCc
Confidence 9987611 24677888899999999997765 455566666766 788877
Q ss_pred EEEecC
Q psy2395 553 KSWRDL 558 (570)
Q Consensus 553 ~~~~D~ 558 (570)
+.+..+
T Consensus 226 ~~~~~~ 231 (280)
T 1i9g_A 226 RAWETL 231 (280)
T ss_dssp EEECCC
T ss_pred EEEEEe
Confidence 666543
No 187
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.39 E-value=4.2e-12 Score=129.97 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=104.8
Q ss_pred HHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 384 ELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 384 ~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
...++.++..+. .++.+|||+|||+|.++..+++.. +++|+|+|+|+.+++.|++++...+ ...++.++++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWED 151 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHH
Confidence 344455554432 467899999999999999999875 3699999999999999999988632 23469999999854
Q ss_pred ccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-C------
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-N------ 535 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~------ 535 (570)
++ ++||+|+++..+... +......+++.+.++|+|||.+++.... .
T Consensus 152 -~~---~~fD~v~~~~~l~~~-----------------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 204 (318)
T 2fk8_A 152 -FA---EPVDRIVSIEAFEHF-----------------------GHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMA 204 (318)
T ss_dssp -CC---CCCSEEEEESCGGGT-----------------------CGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHH
T ss_pred -CC---CCcCEEEEeChHHhc-----------------------CHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhh
Confidence 22 689999997543211 0124578999999999999999884421 1
Q ss_pred ----------------------------CHHHHHHHHHHCCCeeEEEE
Q psy2395 536 ----------------------------QSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 536 ----------------------------~~~~l~~ll~~~Gf~~i~~~ 555 (570)
..+.+.+++.++||..+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 205 ARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCE
T ss_pred hccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEE
Confidence 24567888899999876543
No 188
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.39 E-value=2.4e-12 Score=127.54 Aligned_cols=139 Identities=17% Similarity=0.125 Sum_probs=101.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC--------------------------
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY-------------------------- 449 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~-------------------------- 449 (570)
.++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|++++.......
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3567999999999999999886652 489999999999999999886421000
Q ss_pred CCCE-EEEEcccccccccCC---CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccC
Q psy2395 450 NIPI-KFIKSNWYNNLQNYK---KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKN 525 (570)
Q Consensus 450 ~~~v-~~~~~D~~~~l~~~~---~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkpg 525 (570)
..++ .++++|+.+..+... ++||+|+++.... ........+..+++.+.++|+||
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~---------------------~~~~~~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD---------------------AACPDLPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH---------------------HHCSSHHHHHHHHHHHHTTEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhh---------------------hhcCChHHHHHHHHHHHhhCCCC
Confidence 0127 899999976543233 6899999963211 00112345688999999999999
Q ss_pred eEEEEEEcC----------------CCHHHHHHHHHHCCCeeEEEEec
Q psy2395 526 GLLLIEHGY----------------NQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 526 G~l~~~~~~----------------~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
|++++.... ...+.+.+++.++||..+.+...
T Consensus 192 G~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 192 GFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp EEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 999885421 24568999999999999877654
No 189
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.39 E-value=1.9e-12 Score=135.36 Aligned_cols=116 Identities=10% Similarity=0.180 Sum_probs=86.2
Q ss_pred HHHHHHhh-cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh-------hcccCCCCEEEEE
Q psy2395 386 LVDLIVKK-TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK-------KLTKYNIPIKFIK 457 (570)
Q Consensus 386 l~~~~~~~-~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~-------~~~~~~~~v~~~~ 457 (570)
++..++.. ...++.+|||||||+|.+++.+|...+ ..+|+|||+|+.+++.|++|+.. ++. ...+++|++
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-~~~rVefi~ 238 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-KHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB-CCCEEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC-CCCCeEEEE
Confidence 33344433 235788999999999999999998764 35799999999999999987632 211 124799999
Q ss_pred cccccccccCC--CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 458 SNWYNNLQNYK--KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 458 ~D~~~~l~~~~--~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+|+.+. +... ..||+|++|++|+.. .....+.++.+.|||||.|++
T Consensus 239 GD~~~l-p~~d~~~~aDVVf~Nn~~F~p--------------------------dl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 239 GDFLSE-EWRERIANTSVIFVNNFAFGP--------------------------EVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCTTSH-HHHHHHHTCSEEEECCTTCCH--------------------------HHHHHHHHHHTTSCTTCEEEE
T ss_pred CcccCC-ccccccCCccEEEEcccccCc--------------------------hHHHHHHHHHHcCCCCcEEEE
Confidence 999763 2211 369999999987631 235666778899999999986
No 190
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.39 E-value=2.3e-12 Score=130.18 Aligned_cols=136 Identities=14% Similarity=0.076 Sum_probs=94.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc-------------cCC-------------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT-------------KYN------------- 450 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~-------------~~~------------- 450 (570)
++.+|||+|||+|.++..++... +.+|+|+|+|+.|++.|++++..... ..+
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 56799999999999655444432 46999999999999999987642100 000
Q ss_pred -CCEEEEEcccccccc-----cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc
Q psy2395 451 -IPIKFIKSNWYNNLQ-----NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK 524 (570)
Q Consensus 451 -~~v~~~~~D~~~~l~-----~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp 524 (570)
..+.++.+|+.+.++ ..+++||+|+++..+.. .......+..+++++.++|||
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~---------------------~~~~~~~~~~~l~~~~r~Lkp 207 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA---------------------VSPDLASFQRALDHITTLLRP 207 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH---------------------HCSSHHHHHHHHHHHHTTEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh---------------------hcCCHHHHHHHHHHHHHhcCC
Confidence 015678889876333 12356999999743211 011234568899999999999
Q ss_pred CeEEEEEE----------------cCCCHHHHHHHHHHCCCeeEEEE
Q psy2395 525 NGLLLIEH----------------GYNQSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 525 gG~l~~~~----------------~~~~~~~l~~ll~~~Gf~~i~~~ 555 (570)
||+|++.. .....+.+.++|.++||..+.+.
T Consensus 208 GG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 208 GGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp EEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 99998742 12356889999999999987655
No 191
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.39 E-value=1.8e-11 Score=128.23 Aligned_cols=144 Identities=10% Similarity=0.082 Sum_probs=110.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.+..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++...+ ...+++|..+|+++..+ ..||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~p---~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRG--LADRCEILPGDFFETIP---DGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTTCCC---SSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcC--cCCceEEeccCCCCCCC---CCceEEE
Confidence 4568999999999999999999876 689999999 999999999987642 34579999999985443 3799999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---cC------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---GY------------------ 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---~~------------------ 534 (570)
++-.++..+ ......+++.+.+.|+|||++++.. +.
T Consensus 274 ~~~vlh~~~-----------------------d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~ 330 (369)
T 3gwz_A 274 IKHVLHDWD-----------------------DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVG 330 (369)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHS
T ss_pred hhhhhccCC-----------------------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcC
Confidence 954332111 1223579999999999999998732 11
Q ss_pred ---CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 535 ---NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 535 ---~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
...+++.+++.++||+.++++....+...++.++.
T Consensus 331 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 331 GAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp CCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred CccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 12567889999999999999875566666666653
No 192
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.38 E-value=8e-12 Score=130.85 Aligned_cols=143 Identities=12% Similarity=0.136 Sum_probs=108.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++..++ ...+++++.+|+++.++ ..||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFKPLP---VTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCS---CCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCcCC---CCCCEEE
Confidence 4578999999999999999999876 689999999 999999999998642 23469999999976444 3499999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc-----C----------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG-----Y---------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~-----~---------------- 534 (570)
++..++..+ -.....+++.+.+.|+|||++++... .
T Consensus 254 ~~~vl~~~~-----------------------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 310 (374)
T 1qzz_A 254 LSFVLLNWS-----------------------DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLT 310 (374)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHH
T ss_pred EeccccCCC-----------------------HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHH
Confidence 975443111 11235889999999999998876432 1
Q ss_pred ------CCHHHHHHHHHHCCCeeEEEEecCCCCc-----eEEEEEe
Q psy2395 535 ------NQSNLVRKLLFKYGFSDIKSWRDLSGIE-----RVTQGKI 569 (570)
Q Consensus 535 ------~~~~~l~~ll~~~Gf~~i~~~~D~~g~~-----R~~~~~~ 569 (570)
...+++.+++.++||..+++... .+.. .++.+++
T Consensus 311 ~~~~~~~~~~~~~~ll~~aGf~~~~~~~~-~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 311 FMGGRVRTRDEVVDLAGSAGLALASERTS-GSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHSCCCCCHHHHHHHHHTTTEEEEEEEEE-CCSSCSSCEEEEEEEE
T ss_pred hCCCcCCCHHHHHHHHHHCCCceEEEEEC-CCCcccCCcEEEEEEE
Confidence 14567888999999999887754 4444 6777664
No 193
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.38 E-value=6.7e-12 Score=120.30 Aligned_cols=101 Identities=18% Similarity=0.176 Sum_probs=81.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++|+..++ -.+++++.+|+.+.... .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQGWQA-RAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccCCcc-CCCccEEE
Confidence 567899999999999999999873 699999999999999999998742 12699999999775443 47899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
++.+..... ..+.+.|+|||++++.++.
T Consensus 149 ~~~~~~~~~-------------------------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPEIP-------------------------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSSCC-------------------------------THHHHTEEEEEEEEEEECS
T ss_pred Eccchhhhh-------------------------------HHHHHhcccCcEEEEEEcC
Confidence 975432110 1456799999999998876
No 194
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.38 E-value=2.7e-12 Score=134.93 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=85.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCC-EEEEEcccccccc-cCCCceeEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIP-IKFIKSNWYNNLQ-NYKKLFNII 474 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~-v~~~~~D~~~~l~-~~~~~fD~I 474 (570)
++.+|||+|||||.+++.++...+...+|+++|+|+.+++.+++|++.|+ ...+ ++++++|+.+.+. ...++||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng--l~~~~v~v~~~Da~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN--IPEDRYEIHGMEANFFLRKEWGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHHHSCCSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC--CCCceEEEEeCCHHHHHHHhhCCCCcEE
Confidence 46799999999999999999875323689999999999999999999864 2334 9999999977665 444689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
++|| |.. ...++..+.+.|++||++++++
T Consensus 130 ~lDP-~g~----------------------------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 130 DLDP-FGT----------------------------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EECC-SSC----------------------------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECC-CcC----------------------------HHHHHHHHHHHhCCCCEEEEEe
Confidence 9998 321 1357778888999999998876
No 195
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.38 E-value=2.1e-12 Score=127.65 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=83.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..++ +.+|+|+|+|+.+++.|+++. .++.++++|+.+. + .+++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~-~-~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADRL--------PNTNFGKADLATW-K-PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHHS--------TTSEEEECCTTTC-C-CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhC--------CCcEEEECChhhc-C-ccCCcCEEE
Confidence 4677999999999999999998865 578999999999999999872 2478999999663 3 357899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
++..+... .....+++.+.++|+|||++++..+
T Consensus 101 ~~~~l~~~-------------------------~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 101 ANAVFQWV-------------------------PDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EESCGGGS-------------------------TTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EeCchhhC-------------------------CCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 97654321 1246889999999999999998653
No 196
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=3.2e-12 Score=126.60 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=88.7
Q ss_pred hHHHHHHHHHhh--cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 382 ETELLVDLIVKK--TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 382 ~t~~l~~~~~~~--~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
....+++.+... ...++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++.. ...++.++++|
T Consensus 22 ~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d 94 (263)
T 2yqz_A 22 VAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAG----VDRKVQVVQAD 94 (263)
T ss_dssp HHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTT----SCTTEEEEESC
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhc----cCCceEEEEcc
Confidence 334555555331 1246789999999999999999965 36999999999999999999731 34569999999
Q ss_pred cccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 460 WYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 460 ~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
+.+ ++..+++||+|+++..+...+ ....+++++.+.|+|||++++..
T Consensus 95 ~~~-~~~~~~~fD~v~~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 95 ARA-IPLPDESVHGVIVVHLWHLVP-------------------------DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp TTS-CCSCTTCEEEEEEESCGGGCT-------------------------THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc-CCCCCCCeeEEEECCchhhcC-------------------------CHHHHHHHHHHHCCCCcEEEEEe
Confidence 955 444457899999975433111 23678899999999999998764
No 197
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=5.3e-12 Score=124.61 Aligned_cols=133 Identities=13% Similarity=0.115 Sum_probs=93.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC----C-CCEEEEEcccccccc--cCCC
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY----N-IPIKFIKSNWYNNLQ--NYKK 469 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~----~-~~v~~~~~D~~~~l~--~~~~ 469 (570)
++.+|||+|||+|.+++.++..++ ..+|+|+|+|+.+++.|++|+..+.... + .++.++++|+.+.++ ...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 567999999999999999999875 5799999999999999999987641000 2 369999999987554 2347
Q ss_pred ceeEEEECCC--CCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC-HHHHHHHHHH
Q psy2395 470 LFNIIVANPP--YIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ-SNLVRKLLFK 546 (570)
Q Consensus 470 ~fD~Iv~NPP--y~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~l~~ll~~ 546 (570)
.+|.|+.+.| +.... +.... .....++..+.++|+|||.+++.+.... .+.+.+.+..
T Consensus 128 ~~d~v~~~~p~p~~k~~--~~~~r-----------------~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 188 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQR--KHKAR-----------------IITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEE 188 (246)
T ss_dssp CEEEEEEESCCCC--------CSS-----------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCEEEEECCCcccccc--hhHHh-----------------hccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHh
Confidence 8999987633 22110 00000 0126788999999999999998765533 2344556666
Q ss_pred CCC
Q psy2395 547 YGF 549 (570)
Q Consensus 547 ~Gf 549 (570)
.|+
T Consensus 189 ~~~ 191 (246)
T 2vdv_E 189 HPL 191 (246)
T ss_dssp STT
T ss_pred CcC
Confidence 663
No 198
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.38 E-value=4.5e-12 Score=123.06 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=83.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc--CCCCEEEEEcccccccccCCCcee
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK--YNIPIKFIKSNWYNNLQNYKKLFN 472 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~--~~~~v~~~~~D~~~~l~~~~~~fD 472 (570)
..++.+|||+|||+|.++..+++...+..+|+|+|+|+.+++.|++|+..++.. ...++.++++|+..... ..++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcC
Confidence 356789999999999999999987533469999999999999999998864210 02369999999865432 236899
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN 535 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~ 535 (570)
+|+++.|+. .+++.+.+.|+|||++++.++..
T Consensus 154 ~i~~~~~~~-------------------------------~~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 154 AIHVGAAAP-------------------------------VVPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp EEEECSBBS-------------------------------SCCHHHHHTEEEEEEEEEEESCT
T ss_pred EEEECCchH-------------------------------HHHHHHHHhcCCCcEEEEEEecC
Confidence 999987652 11246678999999999988653
No 199
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.38 E-value=3.8e-12 Score=133.64 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=91.7
Q ss_pred ccccchh-HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC-----
Q psy2395 376 VLIPRPE-TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY----- 449 (570)
Q Consensus 376 ~~~pr~~-t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~----- 449 (570)
.|-|... .+.+.-.++... ++.+|||+|||||.+++.++...+ +.+|+++|+|+.+++.|++|+..|....
T Consensus 27 F~np~~~~nr~l~~~~l~~~--~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~ 103 (378)
T 2dul_A 27 FYNPRMALNRDIVVVLLNIL--NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESK 103 (378)
T ss_dssp CCCGGGHHHHHHHHHHHHHH--CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECS
T ss_pred eeCCchHHHHHHHHHHHHHc--CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhccccccccc
Confidence 3345532 333333333333 577999999999999999998864 4689999999999999999999861000
Q ss_pred ------CC-CEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcc
Q psy2395 450 ------NI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYL 522 (570)
Q Consensus 450 ------~~-~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~L 522 (570)
+. +++++++|+.+.......+||+|+.|||+.. ..++..+.+.|
T Consensus 104 ~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~-----------------------------~~~l~~a~~~l 154 (378)
T 2dul_A 104 GRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSP-----------------------------MEFLDTALRSA 154 (378)
T ss_dssp SEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCC-----------------------------HHHHHHHHHHE
T ss_pred ccccccCCCceEEEcCcHHHHHHhccCCCCEEEeCCCCCH-----------------------------HHHHHHHHHhc
Confidence 22 3999999997755433458999999987531 46777888899
Q ss_pred ccCeEEEEEE
Q psy2395 523 VKNGLLLIEH 532 (570)
Q Consensus 523 kpgG~l~~~~ 532 (570)
++||++++.+
T Consensus 155 k~gG~l~vt~ 164 (378)
T 2dul_A 155 KRRGILGVTA 164 (378)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999888765
No 200
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=3.7e-12 Score=127.94 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=95.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++. + +.+|+|+|+|+.+++.|+++.. ++.++++|+.+ ++. +++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~-~~~-~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNYP--------HLHFDVADARN-FRV-DKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHCT--------TSCEEECCTTT-CCC-SSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhCC--------CCEEEECChhh-CCc-CCCcCEEE
Confidence 4677999999999999999997 2 5799999999999999987652 37899999965 333 47899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC--------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN-------------------- 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------------- 535 (570)
++..+.... ....+++++.+.|+|||++++..+..
T Consensus 123 ~~~~l~~~~-------------------------d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (279)
T 3ccf_A 123 SNAMLHWVK-------------------------EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIH 177 (279)
T ss_dssp EESCGGGCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCC
T ss_pred EcchhhhCc-------------------------CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCc
Confidence 975543211 23678899999999999999865431
Q ss_pred -----------CHHHHHHHHHHCCCeeEEEE
Q psy2395 536 -----------QSNLVRKLLFKYGFSDIKSW 555 (570)
Q Consensus 536 -----------~~~~l~~ll~~~Gf~~i~~~ 555 (570)
....+.++|.++||..+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 178 NPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp CGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred cccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 23457888889999987654
No 201
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.37 E-value=4.1e-12 Score=129.68 Aligned_cols=137 Identities=12% Similarity=0.156 Sum_probs=95.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC-CCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY-NIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++++....... ..+++++.+|+.+.++...++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 4568999999999999999997653 5799999999999999999976411012 4579999999977655445789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc--CCCHH---HHHHHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG--YNQSN---LVRKLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~---~l~~ll~~~Gf 549 (570)
++|+|...... .......+++.+.+.|+|||++++..+ ..... .+.+.+++ -|
T Consensus 173 i~d~~~~~~~~---------------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~-~f 230 (304)
T 2o07_A 173 ITDSSDPMGPA---------------------ESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQS-LF 230 (304)
T ss_dssp EEECC--------------------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHH-HC
T ss_pred EECCCCCCCcc---------------------hhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHH-hC
Confidence 99987431100 001235788899999999999998763 33333 33344444 36
Q ss_pred eeEEEE
Q psy2395 550 SDIKSW 555 (570)
Q Consensus 550 ~~i~~~ 555 (570)
..+..+
T Consensus 231 ~~v~~~ 236 (304)
T 2o07_A 231 PVVAYA 236 (304)
T ss_dssp SEEEEE
T ss_pred CCceeE
Confidence 655544
No 202
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.37 E-value=2.5e-12 Score=125.93 Aligned_cols=120 Identities=24% Similarity=0.271 Sum_probs=92.4
Q ss_pred chhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 380 RPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 380 r~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
.+....++..+... .++.+|||+|||+|..++.++...+++.+|+++|+|+.+++.|++++..++ ...+++++++|
T Consensus 57 ~~~~~~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d 132 (232)
T 3cbg_A 57 SPEQAQFLGLLISL--TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--VAEKISLRLGP 132 (232)
T ss_dssp CHHHHHHHHHHHHH--HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESC
T ss_pred CHHHHHHHHHHHHh--cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcC
Confidence 45555555555443 246799999999999999999877546799999999999999999998753 23469999999
Q ss_pred cccccccC---C--CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 460 WYNNLQNY---K--KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 460 ~~~~l~~~---~--~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+.+.++.. + ++||+|+++.+. ..+..+++.+.++|+|||++++.
T Consensus 133 ~~~~l~~l~~~~~~~~fD~V~~d~~~----------------------------~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 133 ALATLEQLTQGKPLPEFDLIFIDADK----------------------------RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHHHHHHTSSSCCCEEEEEECSCG----------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCcCEEEECCCH----------------------------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 86543321 2 689999997541 23577889999999999999885
No 203
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.37 E-value=6.7e-12 Score=125.37 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=98.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHH------HHHHHHHHHHhhcccCCCCEEEEEcc-ccc-cccc
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKF------ALKIAKKNAKKKLTKYNIPIKFIKSN-WYN-NLQN 466 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~------al~~A~~n~~~~~~~~~~~v~~~~~D-~~~-~l~~ 466 (570)
..++.+|||+|||+|.++..++..+.+..+|+|+|+|+. +++.|++++..++ ...+++++++| +.. .++.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECChhhhccCCC
Confidence 356789999999999999999988533479999999997 9999999987532 22469999998 422 2333
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-c------------
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-G------------ 533 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~------------ 533 (570)
.+++||+|+++.++...++ ...+++.+..+++|||++++.. .
T Consensus 119 ~~~~fD~v~~~~~l~~~~~-------------------------~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~ 173 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFAS-------------------------ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHL 173 (275)
T ss_dssp TTCCCSEEEEESCGGGSSC-------------------------HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHH
T ss_pred CCCCEEEEEEccchhhCCC-------------------------HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHH
Confidence 3578999999876542211 1346666667777899998742 1
Q ss_pred ----------------------CCCHHHHHHHHHHCCCeeEEEEe
Q psy2395 534 ----------------------YNQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 534 ----------------------~~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
......+.++++++||..+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 174 QAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp HHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEE
Confidence 11245778889999999876543
No 204
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.36 E-value=9.2e-12 Score=129.36 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=109.6
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEEC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~N 477 (570)
+.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++...+ ...+++++.+|+++......+.||+|+++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHD--LGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTT--CGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcC--CCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 78999999999999999999886 589999999 899999999988642 23469999999987542234679999995
Q ss_pred CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc---C--------------------
Q psy2395 478 PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---Y-------------------- 534 (570)
Q Consensus 478 PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---~-------------------- 534 (570)
-.++.. .......+++.+.+.|+|||++++... .
T Consensus 256 ~vlh~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T 3mcz_A 256 DCLHYF-----------------------DAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTN 312 (352)
T ss_dssp SCGGGS-----------------------CHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHST
T ss_pred cccccC-----------------------CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCC
Confidence 433211 112347899999999999999987421 0
Q ss_pred ----CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEeC
Q psy2395 535 ----NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKIS 570 (570)
Q Consensus 535 ----~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~~ 570 (570)
...+++.+++.++||+.++.. .|...+++|+++
T Consensus 313 ~~~~~t~~e~~~ll~~aGf~~~~~~---~g~~~l~~a~kp 349 (352)
T 3mcz_A 313 HGELHPTPWIAGVVRDAGLAVGERS---IGRYTLLIGQRS 349 (352)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEEE---ETTEEEEEEECC
T ss_pred CCCcCCHHHHHHHHHHCCCceeeec---cCceEEEEEecC
Confidence 124668899999999988743 466788888764
No 205
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.36 E-value=7.8e-12 Score=127.76 Aligned_cols=148 Identities=14% Similarity=0.045 Sum_probs=98.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC--CCcee
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY--KKLFN 472 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD 472 (570)
..++.+|||+|||+|..++.++....+..+|+|+|+++.+++.+++|+..++. .+++++++|+.+..... ..+||
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCccccccCCCC
Confidence 35678999999999999999998754457999999999999999999997532 35999999986643221 14799
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCC----hHHHHHHHHHHhhccccCeEEEEEEcC----CCHHHHHHHH
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNG----LSSIKEIVKNASKYLVKNGLLLIEHGY----NQSNLVRKLL 544 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~g----l~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~l~~ll 544 (570)
.|++|||+.........+ +..+ ........ ......++..+.++|+ ||++++.+.. .+...+..++
T Consensus 177 ~Vl~D~PcSg~G~~~r~p-d~~~----~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l 250 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQL-EEPG----AGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDAL 250 (309)
T ss_dssp EEEECCCCCC-----------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHH
T ss_pred EEEEcCCcCCCCCCccCC-Chhh----hccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHH
Confidence 999999996544321110 1100 00000111 1334678999999887 9998875432 4455667777
Q ss_pred HHC-C-Cee
Q psy2395 545 FKY-G-FSD 551 (570)
Q Consensus 545 ~~~-G-f~~ 551 (570)
.++ + |..
T Consensus 251 ~~~~~~~~~ 259 (309)
T 2b9e_A 251 QQNPGAFRL 259 (309)
T ss_dssp TTSTTTEEE
T ss_pred HhCCCcEEE
Confidence 665 3 543
No 206
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.36 E-value=6.9e-12 Score=128.61 Aligned_cols=153 Identities=12% Similarity=0.137 Sum_probs=104.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc--CCCCEEEEEcccccccccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK--YNIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~--~~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
+++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++++...... ...+++++.+|+.+.++...++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 4567999999999999999997643 579999999999999999997641000 1357999999997765544578999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---C---CHHHHHHHHHHC
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---N---QSNLVRKLLFKY 547 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---~---~~~~l~~ll~~~ 547 (570)
|++|++...... .|. .. -+...+++.+.+.|+|||++++..+. . ....+.+.+++.
T Consensus 155 Ii~d~~~~~~~~----------~~~-------~~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 155 VIIDLTDPVGED----------NPA-------RL-LYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA 216 (314)
T ss_dssp EEEECCCCBSTT----------CGG-------GG-GSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT
T ss_pred EEECCCCccccc----------Ccc-------hh-ccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH
Confidence 999976431000 000 00 01368899999999999999886432 1 234455556554
Q ss_pred CCeeEEEEe----cCCCCceEEEEE
Q psy2395 548 GFSDIKSWR----DLSGIERVTQGK 568 (570)
Q Consensus 548 Gf~~i~~~~----D~~g~~R~~~~~ 568 (570)
|..+..+. -..|...+++|.
T Consensus 217 -F~~v~~~~~~vP~~~g~~~~~~as 240 (314)
T 1uir_A 217 -FRYVRSYKNHIPGFFLNFGFLLAS 240 (314)
T ss_dssp -CSEEEEEEEEEGGGTEEEEEEEEE
T ss_pred -CCceEEEEEecCCCCCeEEEEEEE
Confidence 66665443 234455566654
No 207
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.35 E-value=7.1e-12 Score=141.70 Aligned_cols=161 Identities=20% Similarity=0.165 Sum_probs=108.3
Q ss_pred cchhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcC-------------------------------------
Q psy2395 379 PRPETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSK------------------------------------- 420 (570)
Q Consensus 379 pr~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~------------------------------------- 420 (570)
+.|..+.|...++.... .++..|||++||||.+++.+|....
T Consensus 171 ~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~ 250 (703)
T 3v97_A 171 IAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARK 250 (703)
T ss_dssp CCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhh
Confidence 34555666666665433 4567899999999999999886531
Q ss_pred ----CCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccc
Q psy2395 421 ----NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRF 495 (570)
Q Consensus 421 ----~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ 495 (570)
...+|+|+|+|+.|++.|+.|+..++ ....++|.++|+.+..... .++||+||+||||...-.
T Consensus 251 ~~~~~~~~i~G~Did~~av~~A~~N~~~ag--v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg---------- 318 (703)
T 3v97_A 251 GLAEYSSHFYGSDSDARVIQRARTNARLAG--IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD---------- 318 (703)
T ss_dssp HHHHCCCCEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-------------
T ss_pred ccccCCccEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCccccccCCCCEEEeCCCcccccc----------
Confidence 12579999999999999999999864 2335999999997743322 238999999999964210
Q ss_pred cccccccccCCCh-HHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEEEecCCCCceEEE
Q psy2395 496 EPINALTDYSNGL-SSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQ 566 (570)
Q Consensus 496 ep~~al~~~~~gl-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~ 566 (570)
....+ .+|.. +....+.+.|||.+++.++... +.+..|.+..+.++-++|.-.+.+
T Consensus 319 --------~~~~l~~ly~~-l~~~lk~~~~g~~~~ilt~~~~------l~~~~glk~~k~~~l~nG~l~~~~ 375 (703)
T 3v97_A 319 --------SEPALIALHSL-LGRIMKNQFGGWNLSLFSASPD------LLSCLQLRADKQYKAKNGPLDCVQ 375 (703)
T ss_dssp --------CCHHHHHHHHH-HHHHHHHHCTTCEEEEEESCHH------HHHTTCCCEEEEEEEEETTEEEEE
T ss_pred --------chhHHHHHHHH-HHHHHHhhCCCCeEEEEeCCHH------HHHHhCCCcccceeeecCCEEEEE
Confidence 00111 22333 3444555678999999887633 344668777666666666555443
No 208
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.35 E-value=9.4e-12 Score=114.74 Aligned_cols=136 Identities=13% Similarity=0.194 Sum_probs=96.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-----c--cCC
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-----Q--NYK 468 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-----~--~~~ 468 (570)
.++.+|||+|||+|.++..+++...++.+++|+|+|+ ++.. .++.++++|+.+.. + ..+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------CcEEEEEcccccchhhhhhhccCCC
Confidence 5677999999999999999998843357999999999 6532 24889999997642 0 224
Q ss_pred CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cCCCHHHHHHHHHHC
Q psy2395 469 KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GYNQSNLVRKLLFKY 547 (570)
Q Consensus 469 ~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~l~~ll~~~ 547 (570)
++||+|++|+|+........ ...........+++.+.++|+|||.+++.. .......+...+...
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 152 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAV--------------DIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL 152 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHH--------------HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH
T ss_pred CceeEEEECCCccccCCCcc--------------chHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh
Confidence 68999999998764321100 000001223688999999999999998854 445667777777774
Q ss_pred CCeeEEEEecCCC
Q psy2395 548 GFSDIKSWRDLSG 560 (570)
Q Consensus 548 Gf~~i~~~~D~~g 560 (570)
|..+.+.+....
T Consensus 153 -~~~~~~~~~~~~ 164 (180)
T 1ej0_A 153 -FTKVKVRKPDSS 164 (180)
T ss_dssp -EEEEEEECCTTS
T ss_pred -hhhEEeecCCcc
Confidence 888877765443
No 209
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.35 E-value=5.6e-12 Score=121.82 Aligned_cols=123 Identities=17% Similarity=0.180 Sum_probs=95.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc-cccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN-LQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~-l~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++. ..++++|+.+. .+..+++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCCCCCccCEE
Confidence 46789999999999999999876 279999999999999987653 25888998653 33334789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--------------------
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-------------------- 534 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-------------------- 534 (570)
+++..+.... ....+++.+.+.|+|||++++.++.
T Consensus 98 ~~~~~l~~~~-------------------------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T 3cc8_A 98 IFGDVLEHLF-------------------------DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEY 152 (230)
T ss_dssp EEESCGGGSS-------------------------CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSS
T ss_pred EECChhhhcC-------------------------CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccC
Confidence 9964432111 1268899999999999999987532
Q ss_pred ----------CCHHHHHHHHHHCCCeeEEEEe
Q psy2395 535 ----------NQSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 535 ----------~~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
.....+.+++.++||+.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 153 GLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp STTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 2357889999999999887654
No 210
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.34 E-value=1e-11 Score=129.91 Aligned_cols=145 Identities=14% Similarity=0.109 Sum_probs=109.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-ccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-QNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-~~~~~~fD~I 474 (570)
....+|||+|||+|.++..+++.++ +.+++++|+ |.+++.|++++...+ ...+++++.+|+++.. +. +++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCCC-CCCcCEE
Confidence 3567999999999999999999886 689999999 999999999987532 2247999999998742 22 2689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc---C-----------------
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---Y----------------- 534 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---~----------------- 534 (570)
+++-..+.- ..+....+++++.+.|+|||++++.-. .
T Consensus 253 ~~~~vlh~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~ 309 (363)
T 3dp7_A 253 WMSQFLDCF-----------------------SEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYF 309 (363)
T ss_dssp EEESCSTTS-----------------------CHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHH
T ss_pred EEechhhhC-----------------------CHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhH
Confidence 995433211 112346889999999999999977321 1
Q ss_pred ----------CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEE
Q psy2395 535 ----------NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGK 568 (570)
Q Consensus 535 ----------~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~ 568 (570)
...+++.+++.++||..++++........++.++
T Consensus 310 ~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~ 353 (363)
T 3dp7_A 310 TAMANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCR 353 (363)
T ss_dssp HHSSCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEE
T ss_pred HhhhCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEe
Confidence 1356788999999999998887665555555544
No 211
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.34 E-value=6.2e-12 Score=122.40 Aligned_cols=137 Identities=15% Similarity=0.221 Sum_probs=94.1
Q ss_pred ccCeeeeecCCccccchhHH-HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCC-----CcEEEEEeCCHHHHHHH
Q psy2395 365 FYGLVLNITSDVLIPRPETE-LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKN-----KIEIIATDISKFALKIA 438 (570)
Q Consensus 365 f~~~~~~v~~~~~~pr~~t~-~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~-----~~~V~gvDis~~al~~A 438 (570)
|++..+.+..+..+..|... .+++.+.. ...++.+|||+|||+|.++..+++..+. ..+|+|+|+++.+++.|
T Consensus 52 y~d~~~~~~~~~~~~~p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a 130 (227)
T 1r18_A 52 YMDAPQPIGGGVTISAPHMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 130 (227)
T ss_dssp TBSSCEEEETTEEECCHHHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHH
T ss_pred ccCCCcccCCCCccCChHHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHH
Confidence 33444444445455555432 33333321 1356789999999999999999986521 14899999999999999
Q ss_pred HHHHHhhccc--CCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 439 KKNAKKKLTK--YNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 439 ~~n~~~~~~~--~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
++|+..++.. ...+++++.+|+.+.++. .++||+|+++.+... +.+
T Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~-------------------------------~~~ 178 (227)
T 1r18_A 131 KANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPYNAIHVGAAAPD-------------------------------TPT 178 (227)
T ss_dssp HHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSEEEEEECSCBSS-------------------------------CCH
T ss_pred HHHHHhcCccccCCCceEEEECCcccCCCc-CCCccEEEECCchHH-------------------------------HHH
Confidence 9998764200 023699999999774442 368999999876421 124
Q ss_pred HHhhccccCeEEEEEEcC
Q psy2395 517 NASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~ 534 (570)
.+.+.|+|||++++.++.
T Consensus 179 ~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 179 ELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHHHTEEEEEEEEEEESC
T ss_pred HHHHHhcCCCEEEEEEec
Confidence 667799999999998875
No 212
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=1.2e-11 Score=118.96 Aligned_cols=106 Identities=17% Similarity=0.100 Sum_probs=84.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.+.+..+|+|+|+|+.+++.|++++..++ -.++.+.++|+....+. .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~fD~v~ 151 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLGYEP-LAPYDRIY 151 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccCCCC-CCCeeEEE
Confidence 467899999999999999999887334799999999999999999987642 13599999998654442 36899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 536 (570)
++.++... .+.+.+.|+|||++++.++...
T Consensus 152 ~~~~~~~~-------------------------------~~~~~~~L~pgG~lv~~~~~~~ 181 (215)
T 2yxe_A 152 TTAAGPKI-------------------------------PEPLIRQLKDGGKLLMPVGRYL 181 (215)
T ss_dssp ESSBBSSC-------------------------------CHHHHHTEEEEEEEEEEESSSS
T ss_pred ECCchHHH-------------------------------HHHHHHHcCCCcEEEEEECCCC
Confidence 98764311 1266789999999999887653
No 213
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.34 E-value=2.2e-11 Score=119.53 Aligned_cols=120 Identities=18% Similarity=0.216 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW 460 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~ 460 (570)
|....++..++.. .++.+|||+|||+|..+..+++..+.+.+|+++|+|+.+++.|++++..++ ...++.++++|+
T Consensus 46 ~~~~~~l~~l~~~--~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~~d~ 121 (239)
T 2hnk_A 46 PEEGQFLNILTKI--SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKLGSA 121 (239)
T ss_dssp HHHHHHHHHHHHH--HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHh--hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCH
Confidence 4444444444432 256799999999999999999887545799999999999999999998643 223599999998
Q ss_pred ccccccC---------------C-CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc
Q psy2395 461 YNNLQNY---------------K-KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK 524 (570)
Q Consensus 461 ~~~l~~~---------------~-~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp 524 (570)
.+.++.. . ++||+|+++.+ ...+..+++.+.+.|+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~----------------------------~~~~~~~l~~~~~~L~p 173 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD----------------------------KENYPNYYPLILKLLKP 173 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC----------------------------GGGHHHHHHHHHHHEEE
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCC----------------------------HHHHHHHHHHHHHHcCC
Confidence 7644321 2 68999999742 12346788899999999
Q ss_pred CeEEEEEE
Q psy2395 525 NGLLLIEH 532 (570)
Q Consensus 525 gG~l~~~~ 532 (570)
||++++..
T Consensus 174 gG~lv~~~ 181 (239)
T 2hnk_A 174 GGLLIADN 181 (239)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEEc
Confidence 99999864
No 214
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.34 E-value=3.1e-11 Score=125.88 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=109.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++..++ ...+++++.+|+++. +. ..+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~-~~--~~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKE-SY--PEADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTS-CC--CCCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccC-CC--CCCCEEE
Confidence 4677999999999999999999876 689999999 999999999988642 234699999999764 22 2359999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---------------------c-
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---------------------G- 533 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---------------------~- 533 (570)
++-.++..+ -+....+++.+.+.|+|||++++.. +
T Consensus 262 ~~~vlh~~~-----------------------d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 318 (359)
T 1x19_A 262 FCRILYSAN-----------------------EQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGM 318 (359)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGS
T ss_pred EechhccCC-----------------------HHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCC
Confidence 964432111 1235789999999999999996632 1
Q ss_pred C------CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEeC
Q psy2395 534 Y------NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKIS 570 (570)
Q Consensus 534 ~------~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~~ 570 (570)
. ...+++.++++++||+.++++.-- ..+++.++++
T Consensus 319 g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~--~~~vi~a~kp 359 (359)
T 1x19_A 319 PFSVLGFKEQARYKEILESLGYKDVTMVRKY--DHLLVQAVKP 359 (359)
T ss_dssp SCCCCCCCCGGGHHHHHHHHTCEEEEEEEET--TEEEEEEECC
T ss_pred CCcccCCCCHHHHHHHHHHCCCceEEEEecC--CceEEEEeCC
Confidence 1 345678899999999998887633 5678877754
No 215
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=4.5e-12 Score=130.14 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=82.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++...+|+|+|+|+.+++.|++++..++. .+++++++|+.+..+. .++||+|+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---~~v~~~~~d~~~~~~~-~~~fD~Iv 149 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---ENVIFVCGDGYYGVPE-FSPYDVIF 149 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEECChhhcccc-CCCeEEEE
Confidence 5678999999999999999998875346899999999999999999986421 2499999999764432 36899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
+++++.... +.+.+.|+|||++++.++.
T Consensus 150 ~~~~~~~~~-------------------------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEVP-------------------------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCCC-------------------------------HHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHHH-------------------------------HHHHHhcCCCcEEEEEECC
Confidence 988753110 3556799999999987654
No 216
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.34 E-value=5.7e-12 Score=119.80 Aligned_cols=153 Identities=16% Similarity=0.146 Sum_probs=99.8
Q ss_pred HHHHHHHHhh-cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 384 ELLVDLIVKK-TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 384 ~~l~~~~~~~-~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
..|.+..... ..+++.+|||+|||+|.++..+++. ..+|+|+|+++.. ...+++++++|+.+
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~--------------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME--------------EIAGVRFIRCDIFK 73 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC--------------CCTTCEEEECCTTS
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc--------------cCCCeEEEEccccC
Confidence 3444444433 2357789999999999999999976 4799999999852 12358999999976
Q ss_pred cccc------CC----CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 463 NLQN------YK----KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 463 ~l~~------~~----~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.... .. ++||+|++|+|........ ............++..+.++|+|||.|++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~--------------~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 74 ETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPS--------------RDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHH--------------HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcc--------------cCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 3210 11 3899999997643221100 0001123455788999999999999999866
Q ss_pred cCC-CHHHHHHHHHHCCCeeEEEEecCCCCc----eEEEEE
Q psy2395 533 GYN-QSNLVRKLLFKYGFSDIKSWRDLSGIE----RVTQGK 568 (570)
Q Consensus 533 ~~~-~~~~l~~ll~~~Gf~~i~~~~D~~g~~----R~~~~~ 568 (570)
-.. ....+...++. .|..+++.++.+++. .+++|+
T Consensus 140 ~~~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~ 179 (191)
T 3dou_A 140 FQGDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFF 179 (191)
T ss_dssp ECSTHHHHHHHHHGG-GEEEEEEECC------CCEEEEEEE
T ss_pred cCCCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEe
Confidence 433 34566666654 599999999887653 455553
No 217
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.33 E-value=2.5e-12 Score=128.10 Aligned_cols=108 Identities=10% Similarity=0.094 Sum_probs=82.8
Q ss_pred HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 385 LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 385 ~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
.+++++.... +.+.+|||+|||+|.++..|+..+ .+|+|+|+|+.|++.|++ ..++.++++|+.+ +
T Consensus 28 ~l~~~l~~~~-~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~-~ 93 (257)
T 4hg2_A 28 ALFRWLGEVA-PARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR---------HPRVTYAVAPAED-T 93 (257)
T ss_dssp HHHHHHHHHS-SCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC---------CTTEEEEECCTTC-C
T ss_pred HHHHHHHHhc-CCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh---------cCCceeehhhhhh-h
Confidence 4556665543 456799999999999999999664 689999999999987753 2359999999854 5
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
+..+++||+|+++-.++.. ....+++++.++|||||.|++..
T Consensus 94 ~~~~~sfD~v~~~~~~h~~--------------------------~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 94 GLPPASVDVAIAAQAMHWF--------------------------DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CCCSSCEEEEEECSCCTTC--------------------------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCcccEEEEeeehhHh--------------------------hHHHHHHHHHHHcCCCCEEEEEE
Confidence 5556899999996443311 12578899999999999997744
No 218
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.33 E-value=1.5e-11 Score=124.28 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=97.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC-CCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY-NIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
+++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|++++..++... ..+++++.+|+.+.+....++||+|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 4568999999999999999987643 5799999999999999999986421111 3579999999977654435789999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHH-HHHHHHHhhccccCeEEEEEEcC--CCHHHH---HHHHHHCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI-KEIVKNASKYLVKNGLLLIEHGY--NQSNLV---RKLLFKYG 548 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~-~~~l~~~~~~LkpgG~l~~~~~~--~~~~~l---~~ll~~~G 548 (570)
++|++..... . ...+ ..+++.+.+.|+|||++++..+. ...+.+ .+.+++.
T Consensus 156 i~d~~~~~~~-------------~---------~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~- 212 (283)
T 2i7c_A 156 IVDSSDPIGP-------------A---------ETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL- 212 (283)
T ss_dssp EEECCCTTTG-------------G---------GGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-
T ss_pred EEcCCCCCCc-------------c---------hhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-
Confidence 9987532110 0 0111 68889999999999999987543 344433 3344443
Q ss_pred CeeEEEE
Q psy2395 549 FSDIKSW 555 (570)
Q Consensus 549 f~~i~~~ 555 (570)
|..+..+
T Consensus 213 F~~v~~~ 219 (283)
T 2i7c_A 213 FKKVEYA 219 (283)
T ss_dssp CSEEEEE
T ss_pred CCceEEE
Confidence 7766544
No 219
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.33 E-value=2.4e-11 Score=126.54 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=107.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++..++ ...+++++.+|+++.++ ..||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEG--LSDRVDVVEGDFFEPLP---RKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTT--CTTTEEEEECCTTSCCS---SCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCCCC---CCccEEE
Confidence 4567999999999999999999876 589999999 999999999998642 23479999999987544 3599999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------------------- 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------------------- 534 (570)
++..++..+ -.....+++++.+.|+|||++++....
T Consensus 255 ~~~vl~~~~-----------------------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 311 (360)
T 1tw3_A 255 LSFVLLNWP-----------------------DHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVF 311 (360)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHH
T ss_pred EcccccCCC-----------------------HHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhh
Confidence 965433111 112357899999999999998874322
Q ss_pred -----CCHHHHHHHHHHCCCeeEEEEecCCCC-----ceEEEEEe
Q psy2395 535 -----NQSNLVRKLLFKYGFSDIKSWRDLSGI-----ERVTQGKI 569 (570)
Q Consensus 535 -----~~~~~l~~ll~~~Gf~~i~~~~D~~g~-----~R~~~~~~ 569 (570)
...+++.+++.++||..++++.- .+. ..++.+++
T Consensus 312 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 312 LGGALRTREKWDGLAASAGLVVEEVRQL-PSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HSCCCCBHHHHHHHHHHTTEEEEEEEEE-ECSSSSCEEEEEEEEE
T ss_pred cCCcCCCHHHHHHHHHHCCCeEEEEEeC-CCCcccCccEEEEEEe
Confidence 12467788999999999887654 232 45565554
No 220
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.32 E-value=7e-12 Score=119.94 Aligned_cols=144 Identities=11% Similarity=0.164 Sum_probs=100.0
Q ss_pred HHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc
Q psy2395 386 LVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ 465 (570)
Q Consensus 386 l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~ 465 (570)
+...+... ..++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|++++.. ..++.++++|+.+. +
T Consensus 32 ~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~-~ 102 (215)
T 2pxx_A 32 FRALLEPE-LRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKL-D 102 (215)
T ss_dssp HHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSC-C
T ss_pred HHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcC-C
Confidence 44444443 35678999999999999999998753 3899999999999999998763 24689999999663 3
Q ss_pred cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHH
Q psy2395 466 NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLF 545 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~ 545 (570)
..+++||+|++++++......+. .| +............+++.+.++|+|||.+++.... .......++.
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~-~~~~~~~~~~ 171 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGER-------DP---WTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA-APHFRTRHYA 171 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCS-------CT---TSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC-CHHHHHHHHC
T ss_pred CCCCcccEEEECcchhhhccccc-------cc---cccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC-CcHHHHHHHh
Confidence 33478999999887631110000 00 0000112345678999999999999999886654 3444556666
Q ss_pred HCCC
Q psy2395 546 KYGF 549 (570)
Q Consensus 546 ~~Gf 549 (570)
..||
T Consensus 172 ~~~~ 175 (215)
T 2pxx_A 172 QAYY 175 (215)
T ss_dssp CGGG
T ss_pred cccc
Confidence 6665
No 221
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.32 E-value=2.8e-11 Score=124.73 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=102.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
+..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++...+ ...+++|..+|+++..+ ..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~p---~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTG--LSGRAQVVVGSFFDPLP---AGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCC---CSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcC--cCcCeEEecCCCCCCCC---CCCcEEEE
Confidence 457999999999999999999886 689999999 999999999988642 33579999999985443 37999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----------------------
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---------------------- 534 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---------------------- 534 (570)
.-..+.. .-+....+++++.+.|+|||++++....
T Consensus 242 ~~vlh~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~ 298 (332)
T 3i53_A 242 SAVLHDW-----------------------DDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKE 298 (332)
T ss_dssp ESCGGGS-----------------------CHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCC
T ss_pred ehhhccC-----------------------CHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCC
Confidence 5332211 1123478999999999999999874321
Q ss_pred CCHHHHHHHHHHCCCeeEEEEec
Q psy2395 535 NQSNLVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 535 ~~~~~l~~ll~~~Gf~~i~~~~D 557 (570)
...+++.+++.++||+.++++..
T Consensus 299 ~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 299 RSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCEEEEEEEC
Confidence 23567889999999999988854
No 222
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=1.5e-11 Score=118.82 Aligned_cols=122 Identities=21% Similarity=0.238 Sum_probs=95.2
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEEC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~N 477 (570)
+.+|||+|||+|.++..++ . . +|+|+|+.+++.|+++ ++.++++|+.+ ++...++||+|+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~---~--~--~~vD~s~~~~~~a~~~----------~~~~~~~d~~~-~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLK---I--K--IGVEPSERMAEIARKR----------GVFVLKGTAEN-LPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHT---C--C--EEEESCHHHHHHHHHT----------TCEEEECBTTB-CCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHH---H--H--hccCCCHHHHHHHHhc----------CCEEEEccccc-CCCCCCCeeEEEEc
Confidence 7799999999999998886 2 2 9999999999999876 27889999855 34434689999996
Q ss_pred CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----------------------
Q psy2395 478 PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----------------------- 534 (570)
Q Consensus 478 PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----------------------- 534 (570)
..+... .....+++.+.+.|+|||.+++....
T Consensus 110 ~~l~~~-------------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (219)
T 1vlm_A 110 TTICFV-------------------------DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNAR 164 (219)
T ss_dssp SCGGGS-------------------------SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCC
T ss_pred chHhhc-------------------------cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccc
Confidence 543211 12367889999999999999886432
Q ss_pred -CCHHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 535 -NQSNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 535 -~~~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
.....+.+++.++||..+.+..+..+.+
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~~~~~~~p 193 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVVQTLFKHP 193 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEEECCSCG
T ss_pred cCCHHHHHHHHHHCCCeEEEEecccCCCC
Confidence 2457889999999999999888765543
No 223
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.32 E-value=1.1e-11 Score=125.07 Aligned_cols=138 Identities=9% Similarity=0.068 Sum_probs=97.1
Q ss_pred CCCCCEEEEECCcccHHH-HHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeE
Q psy2395 395 FEKKIKLLEMGTGSGAIA-IAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~-l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
..++.+|||+|||+|.++ +.+|+. + +++|+|+|+|+.+++.|++++...+ . .+++|+++|+.+ ++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~-~-ga~V~gIDis~~~l~~Ar~~~~~~g--l-~~v~~v~gDa~~-l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV-Y-GMRVNVVEIEPDIAELSRKVIEGLG--V-DGVNVITGDETV-ID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT-T-CCEEEEEESSHHHHHHHHHHHHHHT--C-CSEEEEESCGGG-GG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc-c-CCEEEEEECCHHHHHHHHHHHHhcC--C-CCeEEEECchhh-CC--CCCcCE
Confidence 357889999999999776 445543 3 6899999999999999999998753 3 579999999976 33 478999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHH----HHHHHHHCCC
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNL----VRKLLFKYGF 549 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----l~~ll~~~Gf 549 (570)
|+++-. ......+++++.+.|+|||++++......... +.. ....||
T Consensus 192 V~~~a~----------------------------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf 242 (298)
T 3fpf_A 192 LMVAAL----------------------------AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGF 242 (298)
T ss_dssp EEECTT----------------------------CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTE
T ss_pred EEECCC----------------------------ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhh
Confidence 998421 01246889999999999999998664321110 000 123488
Q ss_pred eeEEEEecCC-CCceEEEEEe
Q psy2395 550 SDIKSWRDLS-GIERVTQGKI 569 (570)
Q Consensus 550 ~~i~~~~D~~-g~~R~~~~~~ 569 (570)
.......... -.+.++++++
T Consensus 243 ~~~~~~~p~~~v~N~vv~a~k 263 (298)
T 3fpf_A 243 RRAGVVLPSGKVNNTSVLVFK 263 (298)
T ss_dssp EEEEEECCCTTCCCEEEEEEE
T ss_pred hheeEECCCCCcCcEEEEEEc
Confidence 7755443332 2566777754
No 224
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.31 E-value=8e-12 Score=131.37 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=92.5
Q ss_pred ccchhHHHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE
Q psy2395 378 IPRPETELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI 456 (570)
Q Consensus 378 ~pr~~t~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~ 456 (570)
..+..+..+.+.+.... ..++.+|||+|||+|.+++.+++.+ ..+|+|+|+| .+++.|++++..++ ...+++++
T Consensus 43 ~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~--~~~~v~~~ 117 (376)
T 3r0q_C 43 SDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANN--LDHIVEVI 117 (376)
T ss_dssp TCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTT--CTTTEEEE
T ss_pred cChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcC--CCCeEEEE
Confidence 34445566666665432 2467899999999999999999875 3599999999 99999999998753 33469999
Q ss_pred EcccccccccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 457 KSNWYNNLQNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 457 ~~D~~~~l~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
++|+.+... .++||+|++++ +|+... ......++..+.++|+|||++++
T Consensus 118 ~~d~~~~~~--~~~~D~Iv~~~~~~~l~~-----------------------e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 118 EGSVEDISL--PEKVDVIISEWMGYFLLR-----------------------ESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp ESCGGGCCC--SSCEEEEEECCCBTTBTT-----------------------TCTHHHHHHHHHHHEEEEEEEES
T ss_pred ECchhhcCc--CCcceEEEEcChhhcccc-----------------------hHHHHHHHHHHHhhCCCCeEEEE
Confidence 999966332 27899999987 343211 01346788889999999999975
No 225
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=5e-12 Score=125.85 Aligned_cols=131 Identities=14% Similarity=0.177 Sum_probs=95.9
Q ss_pred HHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 386 LVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 386 l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
+.+.+...+. .++.+|||+|||+|.++..++. ++.+|+|+|+|+.+++.|+.+. +++|+++|+.+ +
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~d~~~-~ 88 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP---------QVEWFTGYAEN-L 88 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT---------TEEEECCCTTS-C
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc---------CCEEEECchhh-C
Confidence 3444444332 4678999999999999999996 2579999999999998776443 58999999965 4
Q ss_pred ccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cCC--------
Q psy2395 465 QNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GYN-------- 535 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~~-------- 535 (570)
+..+++||+|+++..+... .....+++++.++|+ ||++++.. +..
T Consensus 89 ~~~~~~fD~v~~~~~l~~~-------------------------~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~ 142 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHF-------------------------SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLY 142 (261)
T ss_dssp CSCTTCBSEEEEESCGGGC-------------------------SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGG
T ss_pred CCCCCCEeEEEEcchHhhc-------------------------cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHH
Confidence 4445799999997543211 124788999999999 99776643 210
Q ss_pred ---------------CHHHHHHHHHHCCCeeEEEEe
Q psy2395 536 ---------------QSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 536 ---------------~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
..+.+. +|.++||..+.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 143 DYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp GTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred HHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 124566 99999998877654
No 226
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.31 E-value=3e-11 Score=124.55 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=107.0
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECC
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANP 478 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NP 478 (570)
.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++++...+ ...+++++.+|+++..+ +.||+|+++-
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQEVP---SNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTTCCC---SSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCCCCC---CCCCEEEEch
Confidence 8999999999999999998876 579999999 999999999987542 24469999999987432 5799999964
Q ss_pred CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---cC---------------------
Q psy2395 479 PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---GY--------------------- 534 (570)
Q Consensus 479 Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---~~--------------------- 534 (570)
.++..+ -.....+++.+.+.|+|||++++.- +.
T Consensus 242 vl~~~~-----------------------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (334)
T 2ip2_A 242 IIGDLD-----------------------EAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGR 298 (334)
T ss_dssp CGGGCC-----------------------HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCC
T ss_pred hccCCC-----------------------HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCc
Confidence 432110 1233689999999999999998752 11
Q ss_pred -CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 535 -NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 535 -~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
...+++.+++.++||..++++.. .+...++.++.
T Consensus 299 ~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~i~~~~ 333 (334)
T 2ip2_A 299 HRTTEEVVDLLGRGGFAVERIVDL-PMETRMIVAAR 333 (334)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEEE-TTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceeEEEEC-CCCCEEEEEEe
Confidence 12567788999999999988764 45556666653
No 227
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.31 E-value=1.5e-11 Score=127.55 Aligned_cols=117 Identities=21% Similarity=0.238 Sum_probs=87.9
Q ss_pred HHHHHHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 384 ELLVDLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 384 ~~l~~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
..+.+.+.... ..++.+|||+|||+|.+++.+++.+ ..+|+|+|+|+ +++.|++++..++ ...+++++++|+.+
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNK--LEDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTT--CTTTEEEEESCTTT
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcC--CCCcEEEEEeeHHH
Confidence 33434444322 2467799999999999999999874 36999999997 9999999998753 23579999999965
Q ss_pred ccccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 463 NLQNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
. +.+.++||+|++++ +|.... ......++..+.++|+|||.++
T Consensus 125 ~-~~~~~~~D~Ivs~~~~~~l~~-----------------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 V-HLPVEKVDVIISEWMGYFLLF-----------------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp S-CCSCSCEEEEEECCCBTTBTT-----------------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred h-cCCCCcEEEEEEcCchhhccC-----------------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 3 33347899999987 444211 1245678889999999999987
No 228
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=2.3e-11 Score=115.54 Aligned_cols=138 Identities=18% Similarity=0.151 Sum_probs=92.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKN-KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~-~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.++.+|||+|||+|.++..+++..++ ..+|+|+|+|+.+ ...+++++++|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------------~~~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------------PIPNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------------CCTTCEEEECCTTTTSSCCC------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------------CCCCceEEEccccchhhhhhcccccc
Confidence 56779999999999999999988752 4799999999932 11248899999866420
Q ss_pred ---------------cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 466 ---------------NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 466 ---------------~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
....+||+|++|+++...... . .++ .........++..+.++|+|||.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~-----~--~d~-------~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK-----I--DDH-------LNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH-----H--HHH-------HHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc-----c--cCH-------HHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 123689999998754321100 0 000 00011234588899999999999998
Q ss_pred EEc-CCCHHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 531 EHG-YNQSNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 531 ~~~-~~~~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
.+. ......+...+.. .|..+.++++..++.
T Consensus 153 ~~~~~~~~~~l~~~l~~-~f~~v~~~~~~~~r~ 184 (201)
T 2plw_A 153 KMYLGSQTNNLKTYLKG-MFQLVHTTKPKASRN 184 (201)
T ss_dssp EEECSTTHHHHHHHHHT-TEEEEEECCCC----
T ss_pred EEeCCCCHHHHHHHHHH-HHheEEEECCcccCC
Confidence 554 3455667777765 588888888877554
No 229
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.30 E-value=1.9e-11 Score=116.65 Aligned_cols=107 Identities=17% Similarity=0.254 Sum_probs=81.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++... +.+|+|+|+|+.+++.|++++..+ +.++.++++|+.+ ++..+++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~-~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRK-LPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTS-CCSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhh-CCCCCCceeEEE
Confidence 457899999999999855444332 479999999999999999998763 3468899999965 343357899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
++.++... .......+++.+.+.|+|||++++..
T Consensus 95 ~~~~l~~~-----------------------~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHM-----------------------RKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp ECSCGGGS-----------------------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcChHHhC-----------------------CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 96432211 01345789999999999999998754
No 230
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.30 E-value=1.8e-11 Score=119.10 Aligned_cols=101 Identities=22% Similarity=0.252 Sum_probs=81.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..+ + ++.++++|+.+..+ ..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~----~-~v~~~~~d~~~~~~-~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY----N-NIKLILGDGTLGYE-EEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC----S-SEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc----C-CeEEEECCcccccc-cCCCccEEE
Confidence 467799999999999999999875 68999999999999999998752 3 79999999976443 246899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 536 (570)
++.++... ...+.+.|+|||++++.++...
T Consensus 140 ~~~~~~~~-------------------------------~~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 140 VWATAPTL-------------------------------LCKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp ESSBBSSC-------------------------------CHHHHHTEEEEEEEEEEECSSS
T ss_pred ECCcHHHH-------------------------------HHHHHHHcCCCcEEEEEEcCCC
Confidence 98654311 1246779999999999887543
No 231
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.29 E-value=1.9e-11 Score=119.64 Aligned_cols=104 Identities=20% Similarity=0.228 Sum_probs=81.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|++|+..++ -.++.+..+|+...++. ..+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDGSKGFPP-KAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCcccCCCC-CCCccEEE
Confidence 4677999999999999999998874 689999999999999999998642 12499999998444432 24699999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ 536 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 536 (570)
++.+.... ...+.+.|+|||++++.++...
T Consensus 164 ~~~~~~~~-------------------------------~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 164 VTAGAPKI-------------------------------PEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp ECSBBSSC-------------------------------CHHHHHTEEEEEEEEEEECSSS
T ss_pred ECCcHHHH-------------------------------HHHHHHhcCCCcEEEEEEecCC
Confidence 98653210 1256679999999999887643
No 232
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.28 E-value=1.4e-11 Score=128.25 Aligned_cols=106 Identities=20% Similarity=0.241 Sum_probs=83.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..++ ...+++++++|+.+. +.+.++||+|++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s~-~l~~a~~~~~~~~--~~~~v~~~~~d~~~~-~~~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECSS-ISDYAVKIVKANK--LDHVVTIIKGKVEEV-ELPVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTC-CCSSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHCC--CCEEEEECcHH-HHHHHHHHHHHcC--CCCcEEEEECcHHHc-cCCCCceEEEEE
Confidence 57899999999999999999874 46999999995 9999999998753 334599999999664 333479999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+++..... ++ .....++..+.++|+|||+++.
T Consensus 140 ~~~~~~l~----------~~------------~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 140 EWMGYCLF----------YE------------SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCCBBTBT----------BT------------CCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccc----------Cc------------hhHHHHHHHHHHhCCCCCEEcc
Confidence 87532110 00 1346788889999999999864
No 233
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.27 E-value=2.5e-11 Score=120.84 Aligned_cols=108 Identities=6% Similarity=-0.018 Sum_probs=77.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.|++.|++|+.. ......+...+.. ......++||+|+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~----~~v~~~~~~~~~~-~~~~~~~~fD~Vv 115 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALAD----RCVTIDLLDITAE-IPKELAGHFDFVL 115 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSS----SCCEEEECCTTSC-CCGGGTTCCSEEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHh----ccceeeeeecccc-cccccCCCccEEE
Confidence 567899999999999999999764 6899999999999999999864 2112222222220 0112246899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~ 535 (570)
+|..+.... .+....++..+.++| |||.+++.+...
T Consensus 116 ~~~~l~~~~-----------------------~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 116 NDRLINRFT-----------------------TEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred EhhhhHhCC-----------------------HHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 986543110 123467888889999 999999977543
No 234
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.26 E-value=2.7e-12 Score=128.84 Aligned_cols=114 Identities=20% Similarity=0.293 Sum_probs=80.9
Q ss_pred CCCEEEEECCcccH----HHHHHHHhcCC---CcEEEEEeCCHHHHHHHHHHHHhh--------------c---c--cC-
Q psy2395 397 KKIKLLEMGTGSGA----IAIAIAIYSKN---KIEIIATDISKFALKIAKKNAKKK--------------L---T--KY- 449 (570)
Q Consensus 397 ~~~~VLDlGcGtG~----i~l~la~~~~~---~~~V~gvDis~~al~~A~~n~~~~--------------~---~--~~- 449 (570)
++.+|||+|||||. +++.++...+. +++|+|+|+|+.|++.|++++... . . ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66667765331 369999999999999999985210 0 0 00
Q ss_pred --------CCCEEEEEcccccc-cccCCCceeEEEECCCCCCCCCcccCCCCcc-ccccccccccCCChHHHHHHHHHHh
Q psy2395 450 --------NIPIKFIKSNWYNN-LQNYKKLFNIIVANPPYIPKGDIHLNKGDLR-FEPINALTDYSNGLSSIKEIVKNAS 519 (570)
Q Consensus 450 --------~~~v~~~~~D~~~~-l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~-~ep~~al~~~~~gl~~~~~~l~~~~ 519 (570)
..+|.|.++|+.+. .+ ..++||+|+|.- ++. ++| +...++++.+.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crn-------------vliyf~~-----------~~~~~vl~~~~ 239 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRN-------------VMIYFDK-----------TTQEDILRRFV 239 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECS-------------SGGGSCH-----------HHHHHHHHHHG
T ss_pred ceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECC-------------chHhCCH-----------HHHHHHHHHHH
Confidence 12599999999773 22 136899999931 111 111 24578999999
Q ss_pred hccccCeEEEEEEcCC
Q psy2395 520 KYLVKNGLLLIEHGYN 535 (570)
Q Consensus 520 ~~LkpgG~l~~~~~~~ 535 (570)
+.|+|||++++.++..
T Consensus 240 ~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 240 PLLKPDGLLFAGHSEN 255 (274)
T ss_dssp GGEEEEEEEEECTTCC
T ss_pred HHhCCCcEEEEEeccc
Confidence 9999999999866543
No 235
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=9.7e-12 Score=122.13 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=80.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC----CCce
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY----KKLF 471 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~----~~~f 471 (570)
.++.+|||+|||+|.++..++..++ +|+|+|+|+.+++.|++++. ..+++++++|+.+..... ...|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCc
Confidence 4677999999999999999998863 79999999999999998873 236999999997632210 1249
Q ss_pred eEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 472 NIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 472 D~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
|+|+++..++..+ .+....+++.+.+.|+|||++++.
T Consensus 126 d~v~~~~~~~~~~-----------------------~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHHIP-----------------------VEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTTSC-----------------------GGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred cEEEEcchhhcCC-----------------------HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999975543221 013478899999999999987664
No 236
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=3.6e-11 Score=125.04 Aligned_cols=117 Identities=21% Similarity=0.149 Sum_probs=86.0
Q ss_pred HHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 385 LLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 385 ~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+.+.+...+. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..++ ...+++++.+|+.+.
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~--l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTC
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcC--CCCcEEEEEcchhhC
Confidence 33344443322 367899999999999999999864 46999999996 8899999998753 335799999999663
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+. .++||+|++++++.... .+.+...+..+.++|+|||.+++.
T Consensus 112 -~~-~~~~D~Ivs~~~~~~~~-----------------------~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 112 -SL-PEQVDIIISEPMGYMLF-----------------------NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp -CC-SSCEEEEEECCCBTTBT-----------------------TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred -CC-CCceeEEEEeCchhcCC-----------------------hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 22 26899999998754211 012345666788999999999864
No 237
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.25 E-value=7.6e-12 Score=117.43 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=66.9
Q ss_pred hHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccc
Q psy2395 382 ETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWY 461 (570)
Q Consensus 382 ~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~ 461 (570)
.-+.+...+...+ +++.+|||+|||+|.+++.++...| .++|+|+|+|+.|++.|++|+..++ ...++.+ .|..
T Consensus 35 ~ld~fY~~~~~~l-~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~~ 108 (200)
T 3fzg_A 35 TLNDFYTYVFGNI-KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNKE 108 (200)
T ss_dssp GHHHHHHHHHHHS-CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECCH
T ss_pred hHHHHHHHHHhhc-CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--eccc
Confidence 3345555555554 4577999999999999999988766 5799999999999999999998743 2223555 7775
Q ss_pred cccccCCCceeEEEEC
Q psy2395 462 NNLQNYKKLFNIIVAN 477 (570)
Q Consensus 462 ~~l~~~~~~fD~Iv~N 477 (570)
... +.++||+|+++
T Consensus 109 ~~~--~~~~~DvVLa~ 122 (200)
T 3fzg_A 109 SDV--YKGTYDVVFLL 122 (200)
T ss_dssp HHH--TTSEEEEEEEE
T ss_pred ccC--CCCCcChhhHh
Confidence 543 34789999995
No 238
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.25 E-value=3.4e-11 Score=121.90 Aligned_cols=132 Identities=18% Similarity=0.111 Sum_probs=89.0
Q ss_pred CCCEEEEECCcccHHHHHHH----HhcCCCcEE--EEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc-----
Q psy2395 397 KKIKLLEMGTGSGAIAIAIA----IYSKNKIEI--IATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ----- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la----~~~~~~~~V--~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~----- 465 (570)
++.+|||+|||+|.++..++ ..++ ...| +|+|+|+.|++.|++++.........++.+..+++.+...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45799999999998765433 3333 4544 9999999999999998864200011234555666643211
Q ss_pred cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----------
Q psy2395 466 NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----------- 534 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----------- 534 (570)
..+++||+|+++-.++.. .....+++++.++|||||++++....
T Consensus 131 ~~~~~fD~V~~~~~l~~~-------------------------~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 185 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV-------------------------KDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKK 185 (292)
T ss_dssp TCCCCEEEEEEESCGGGC-------------------------SCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeec-------------------------CCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHH
Confidence 224789999995432211 12478899999999999999875321
Q ss_pred -------------CCHHHHHHHHHHCCCeeEEE
Q psy2395 535 -------------NQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 535 -------------~~~~~l~~ll~~~Gf~~i~~ 554 (570)
.....+.++|.++||..+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 186 YGSRFPQDDLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred HHHhccCCCcccCCCHHHHHHHHHHCCCceEEE
Confidence 12457888999999987653
No 239
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.24 E-value=4e-11 Score=115.28 Aligned_cols=132 Identities=11% Similarity=0.121 Sum_probs=95.5
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
..+++.+.. ..++.+|||+|||+|.++..++ .+|+|+|+|+. ++.++++|+.+
T Consensus 56 ~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~------------------~~~~~~~d~~~- 108 (215)
T 2zfu_A 56 DRIARDLRQ--RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL------------------DPRVTVCDMAQ- 108 (215)
T ss_dssp HHHHHHHHT--SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS------------------STTEEESCTTS-
T ss_pred HHHHHHHhc--cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC------------------CceEEEecccc-
Confidence 345555432 2456799999999999988773 47999999998 14578899865
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---CCHHHH
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY---NQSNLV 540 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~l 540 (570)
++..+++||+|+++..++. . ....+++.+.++|+|||++++.... .....+
T Consensus 109 ~~~~~~~fD~v~~~~~l~~-~-------------------------~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 162 (215)
T 2zfu_A 109 VPLEDESVDVAVFCLSLMG-T-------------------------NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTF 162 (215)
T ss_dssp CSCCTTCEEEEEEESCCCS-S-------------------------CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHH
T ss_pred CCCCCCCEeEEEEehhccc-c-------------------------CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHH
Confidence 3443578999999765431 1 2367888999999999999885432 467889
Q ss_pred HHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 541 RKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 541 ~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
.+++.++||..+... ...+.-.++++++
T Consensus 163 ~~~l~~~Gf~~~~~~-~~~~~~~~~~~~k 190 (215)
T 2zfu_A 163 LRAVTKLGFKIVSKD-LTNSHFFLFDFQK 190 (215)
T ss_dssp HHHHHHTTEEEEEEE-CCSTTCEEEEEEE
T ss_pred HHHHHHCCCEEEEEe-cCCCeEEEEEEEe
Confidence 999999999987643 3344445566554
No 240
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.24 E-value=4.1e-11 Score=123.60 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=82.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||+|||+|.+++.+++.+ ..+|+|+|+| .+++.|++++..++ ...+++++++|+.+. +.+.++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~-~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNG--FSDKITLLRGKLEDV-HLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTT--CTTTEEEEESCTTTS-CCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcC--CCCCEEEEECchhhc-cCCCCcccEEEE
Confidence 56799999999999999999764 3699999999 59999999998753 334699999999663 333468999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
+++..... + ...+..++..+.++|+|||+++
T Consensus 112 ~~~~~~l~----------~------------~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 112 EWMGYFLL----------Y------------ESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCCBTTBS----------T------------TCCHHHHHHHHHHHEEEEEEEE
T ss_pred eCchhhcc----------c------------HHHHHHHHHHHHhhcCCCeEEE
Confidence 98743211 0 1134678888899999999987
No 241
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.24 E-value=5.4e-11 Score=126.47 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=81.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-------HHHHHhhcccCCCCEEEEEccccc-c--cc
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIA-------KKNAKKKLTKYNIPIKFIKSNWYN-N--LQ 465 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A-------~~n~~~~~~~~~~~v~~~~~D~~~-~--l~ 465 (570)
.++.+|||+|||+|.+++.+|+..+ ..+|+|+|+++.+++.| ++|+..++.. -.+++++++|.+. . +.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCccccccccc
Confidence 5678999999999999999998764 46899999999999999 8888764210 1469999986543 1 11
Q ss_pred cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 466 NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
...++||+|++|...+. ......+..+.+.|+|||.+++.
T Consensus 319 ~~~~~FDvIvvn~~l~~--------------------------~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFLFD--------------------------EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTTCC--------------------------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcccc--------------------------ccHHHHHHHHHHhCCCCeEEEEe
Confidence 11368999999753221 13456778999999999999874
No 242
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.23 E-value=1.4e-11 Score=131.04 Aligned_cols=150 Identities=15% Similarity=0.224 Sum_probs=103.2
Q ss_pred HHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 385 LLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 385 ~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+++.++.... .++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|+++- ......++..+..+.
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~~------~~~~~~~~~~~~~~~ 164 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREKG------IRVRTDFFEKATADD 164 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTTT------CCEECSCCSHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHcC------CCcceeeechhhHhh
Confidence 34444544432 467799999999999999999754 59999999999999998661 111111222222233
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC---------
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--------- 534 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--------- 534 (570)
++..+++||+|+++-.+... .....+++.+.++|+|||+++++.+.
T Consensus 165 l~~~~~~fD~I~~~~vl~h~-------------------------~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~ 219 (416)
T 4e2x_A 165 VRRTEGPANVIYAANTLCHI-------------------------PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTS 219 (416)
T ss_dssp HHHHHCCEEEEEEESCGGGC-------------------------TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTC
T ss_pred cccCCCCEEEEEECChHHhc-------------------------CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcc
Confidence 33334789999996443211 13478999999999999999997653
Q ss_pred -----------CCHHHHHHHHHHCCCeeEEEEe--cCCCCceEEEEE
Q psy2395 535 -----------NQSNLVRKLLFKYGFSDIKSWR--DLSGIERVTQGK 568 (570)
Q Consensus 535 -----------~~~~~l~~ll~~~Gf~~i~~~~--D~~g~~R~~~~~ 568 (570)
.....+..++.++||..+.+.. ...|.-+++.++
T Consensus 220 ~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 220 FDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLAR 266 (416)
T ss_dssp GGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSEEEEEEEE
T ss_pred hhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCEEEEEEEe
Confidence 1247899999999999887665 334555555554
No 243
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.23 E-value=5.7e-11 Score=119.97 Aligned_cols=138 Identities=10% Similarity=0.142 Sum_probs=93.9
Q ss_pred CCCCEEEEECCcc------cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEE-EEcccccccccCC
Q psy2395 396 EKKIKLLEMGTGS------GAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKF-IKSNWYNNLQNYK 468 (570)
Q Consensus 396 ~~~~~VLDlGcGt------G~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~-~~~D~~~~l~~~~ 468 (570)
+++.+|||+|||+ |. ..+++..+...+|+|+|+|+. + . ++++ +++|+.+... .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------------~--~v~~~i~gD~~~~~~--~ 121 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------------S--DADSTLIGDCATVHT--A 121 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------------C--SSSEEEESCGGGCCC--S
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------------C--CCEEEEECccccCCc--c
Confidence 5678999999944 76 444555554579999999998 1 1 3678 9999976322 3
Q ss_pred CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cCCCHHHHHHHHHHC
Q psy2395 469 KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GYNQSNLVRKLLFKY 547 (570)
Q Consensus 469 ~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~l~~ll~~~ 547 (570)
++||+|++|++....... . .....+..++..+++.+.++|+|||+|++.+ .......+.+.+++.
T Consensus 122 ~~fD~Vvsn~~~~~~g~~-------------~-~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~ 187 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHV-------------T-KENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF 187 (290)
T ss_dssp SCEEEEEECCCCCC---C-------------C-SCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE
T ss_pred CcccEEEEcCCccccccc-------------c-ccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc
Confidence 689999999642211100 0 0122345677899999999999999999855 444556888899999
Q ss_pred CCeeEEEE-ecCCCCceEEEE
Q psy2395 548 GFSDIKSW-RDLSGIERVTQG 567 (570)
Q Consensus 548 Gf~~i~~~-~D~~g~~R~~~~ 567 (570)
||..+.+. ......+.++++
T Consensus 188 GF~~v~~~asr~~s~e~~lv~ 208 (290)
T 2xyq_A 188 SWWTAFVTNVNASSSEAFLIG 208 (290)
T ss_dssp EEEEEEEEGGGTTSSCEEEEE
T ss_pred CCcEEEEEEcCCCchheEEec
Confidence 99888776 222233445544
No 244
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.22 E-value=3.4e-11 Score=122.80 Aligned_cols=113 Identities=19% Similarity=0.138 Sum_probs=77.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC---CCCEEEEEcccccc-----c--cc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY---NIPIKFIKSNWYNN-----L--QN 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~---~~~v~~~~~D~~~~-----l--~~ 466 (570)
++.+|||+|||+|..+..++... ..+|+|+|+|+.|++.|++++...+... ..+++|.++|+... + ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 46799999999998666665543 4699999999999999999876531100 00267888887221 1 12
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
.+++||+|+|.-..+.. +. . +....+++++.++|||||++++.++
T Consensus 126 ~~~~FD~V~~~~~lhy~------------------~~-~---~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYS------------------FH-P---RHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGT------------------CS-T---TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHh------------------CC-H---HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 24789999985321100 00 0 1236899999999999999988665
No 245
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.22 E-value=5.3e-11 Score=114.00 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=78.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+ . ..+|+|+|+|+.+++.|+++.. ++.++++|+.+ ++..+++||+|+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l---~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~d~~~-~~~~~~~fD~v~ 100 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL---P--YPQKVGVEPSEAMLAVGRRRAP--------EATWVRAWGEA-LPFPGESFDVVL 100 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC---C--CSEEEEECCCHHHHHHHHHHCT--------TSEEECCCTTS-CCSCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC---C--CCeEEEEeCCHHHHHHHHHhCC--------CcEEEEccccc-CCCCCCcEEEEE
Confidence 47789999999999998877 2 2389999999999999998762 37899999865 344457899999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
++..+...+ ....+++++.++|+|||.+++..+.
T Consensus 101 ~~~~l~~~~-------------------------~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 101 LFTTLEFVE-------------------------DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EESCTTTCS-------------------------CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcChhhhcC-------------------------CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 975433211 2368899999999999999987644
No 246
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.21 E-value=4.1e-11 Score=125.32 Aligned_cols=104 Identities=19% Similarity=0.241 Sum_probs=80.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
++.+|||||||||.+++.+|+.+ ..+|+|||.|+ +++.|+++++.|+ ...+|+++++|+.+. .. +++||+||+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~--~~~~i~~i~~~~~~~-~l-pe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNG--LEDRVHVLPGPVETV-EL-PEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTT--CTTTEEEEESCTTTC-CC-SSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcC--CCceEEEEeeeeeee-cC-CccccEEEe
Confidence 57799999999999999999876 36999999996 8899999999874 455799999999663 22 378999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
++--. .+.+| ..+..++....++|+|||.++
T Consensus 156 E~~~~----------~l~~e------------~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 156 EWMGY----------GLLHE------------SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCBT----------TBTTT------------CSHHHHHHHHHHHEEEEEEEE
T ss_pred ecccc----------ccccc------------chhhhHHHHHHhhCCCCceEC
Confidence 64211 00011 134677888889999999987
No 247
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.21 E-value=9.5e-11 Score=110.73 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=91.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCC--------cEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE-Ecccccccc-
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNK--------IEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI-KSNWYNNLQ- 465 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~--------~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~-~~D~~~~l~- 465 (570)
.++.+|||+|||+|.++..+++..+.. .+|+|+|+|+.+ ...+++++ .+|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRTS 86 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHHH
Confidence 567899999999999999999886422 799999999842 11247888 899865321
Q ss_pred ------cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHH
Q psy2395 466 ------NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSN 538 (570)
Q Consensus 466 ------~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~ 538 (570)
..+++||+|++|+++...... .+ ...........+++.+.++|+|||++++.+.. ....
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 152 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFR---------DL-----DHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSR 152 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCH---------HH-----HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGH
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCc---------cc-----CHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHH
Confidence 112589999998754321100 00 00001123368899999999999999987644 3445
Q ss_pred HHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 539 LVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 539 ~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
.+...+.. .|..+.++++..++.
T Consensus 153 ~~~~~l~~-~f~~v~~~~~~~~~~ 175 (196)
T 2nyu_A 153 RLQRRLTE-EFQNVRIIKPEASRK 175 (196)
T ss_dssp HHHHHHHH-HEEEEEEECCC----
T ss_pred HHHHHHHH-HhcceEEECCcccCc
Confidence 66666665 488888888776553
No 248
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=4.2e-11 Score=119.31 Aligned_cols=110 Identities=18% Similarity=0.206 Sum_probs=83.7
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
...+.+.+......++.+|||+|||+|.++..++...+ +.+|+|+|+|+.+++.|+++.. ++.+..+|+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~d~~~ 141 (269)
T 1p91_A 71 RDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRYP--------QVTFCVASSHR 141 (269)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhCC--------CcEEEEcchhh
Confidence 34455555544335678999999999999999998764 5799999999999999987642 37899999854
Q ss_pred ccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
++..+++||+|+++.+ ..+++++.++|+|||++++..+.
T Consensus 142 -~~~~~~~fD~v~~~~~--------------------------------~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 142 -LPFSDTSMDAIIRIYA--------------------------------PCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp -CSBCTTCEEEEEEESC--------------------------------CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCCCceeEEEEeCC--------------------------------hhhHHHHHHhcCCCcEEEEEEcC
Confidence 3444578999999532 01256778899999999987754
No 249
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.19 E-value=1.4e-10 Score=129.65 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=94.0
Q ss_pred CCccccchhHHHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc--CC
Q psy2395 374 SDVLIPRPETELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK--YN 450 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~--~~ 450 (570)
.+.|.| |.+...++.++..+. .++.+|||+|||+|.++..+++.+++..+|+|+|+|+.|++.|++++...... .+
T Consensus 698 ~gtFsP-PL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~g 776 (950)
T 3htx_A 698 AAFFKP-PLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACN 776 (950)
T ss_dssp CCCSSS-CHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSS
T ss_pred hCcCCc-hHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcC
Confidence 444554 555555555554432 36789999999999999999987633479999999999999999977642110 11
Q ss_pred -CCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 451 -IPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 451 -~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
.+++|+++|+.+ ++...++||+|+++..+...+ -.....+++.+.++|+|| +++
T Consensus 777 l~nVefiqGDa~d-Lp~~d~sFDlVV~~eVLeHL~-----------------------dp~l~~~L~eI~RvLKPG-~LI 831 (950)
T 3htx_A 777 VKSATLYDGSILE-FDSRLHDVDIGTCLEVIEHME-----------------------EDQACEFGEKVLSLFHPK-LLI 831 (950)
T ss_dssp CSEEEEEESCTTS-CCTTSCSCCEEEEESCGGGSC-----------------------HHHHHHHHHHHHHTTCCS-EEE
T ss_pred CCceEEEECchHh-CCcccCCeeEEEEeCchhhCC-----------------------hHHHHHHHHHHHHHcCCC-EEE
Confidence 369999999966 444457899999964332111 012356889999999999 777
Q ss_pred EEEc
Q psy2395 530 IEHG 533 (570)
Q Consensus 530 ~~~~ 533 (570)
+.++
T Consensus 832 ISTP 835 (950)
T 3htx_A 832 VSTP 835 (950)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6553
No 250
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.18 E-value=9.5e-11 Score=119.72 Aligned_cols=115 Identities=17% Similarity=0.256 Sum_probs=85.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc----CCCCEEEEEccccccc-----ccC
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK----YNIPIKFIKSNWYNNL-----QNY 467 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~----~~~~v~~~~~D~~~~l-----~~~ 467 (570)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|+++....... ...++.++++|+.+.. +..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 56799999999999999998743 579999999999999999988653100 1236899999997642 112
Q ss_pred CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 468 KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
.++||+|+++..++.. .........++..+.++|+|||.+++.++.
T Consensus 112 ~~~fD~V~~~~~l~~~---------------------~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYS---------------------FESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TCCEEEEEEETCGGGG---------------------GGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEecchhhc---------------------cCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 3589999996533210 011234578999999999999999987764
No 251
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.17 E-value=8.5e-10 Score=114.87 Aligned_cols=142 Identities=14% Similarity=0.118 Sum_probs=106.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
....+|+|+|||+|.++..+++.+| +.+++..|. |.+++.|++++... ...+|+|+.+|+++... ..+|+|+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~---~~~rv~~~~gD~~~~~~---~~~D~~~ 249 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQ---EEEQIDFQEGDFFKDPL---PEADLYI 249 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCC---CCCSEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhc---ccCceeeecCccccCCC---CCceEEE
Confidence 3456999999999999999999987 689999997 89999999887642 34579999999986422 4589999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---cCC-----------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---GYN----------------- 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---~~~----------------- 535 (570)
+.--.+ + ..-+....+++++.+.|+|||.+++.- +..
T Consensus 250 ~~~vlh-------------~----------~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~ 306 (353)
T 4a6d_A 250 LARVLH-------------D----------WADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQ 306 (353)
T ss_dssp EESSGG-------------G----------SCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHS
T ss_pred eeeecc-------------c----------CCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHh
Confidence 832111 0 111234688999999999999987732 111
Q ss_pred ------CHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 536 ------QSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 536 ------~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
..+++.+++.++||+.+++++. .+...+++|++
T Consensus 307 ~~g~ert~~e~~~ll~~AGf~~v~v~~~-~~~~~~i~ArK 345 (353)
T 4a6d_A 307 TEGQERTPTHYHMLLSSAGFRDFQFKKT-GAIYDAILARK 345 (353)
T ss_dssp SSCCCCCHHHHHHHHHHHTCEEEEEECC-SSSCEEEEEEC
T ss_pred CCCcCCCHHHHHHHHHHCCCceEEEEEc-CCceEEEEEEe
Confidence 1357889999999999998764 55667888875
No 252
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.17 E-value=2.1e-10 Score=119.06 Aligned_cols=138 Identities=11% Similarity=0.128 Sum_probs=98.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ +.+++++|+ +.++. +.++... ....+++++.+|+++.++ +||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~--~~~~~v~~~~~d~~~~~p----~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAP--DVAGRWKVVEGDFLREVP----HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCG--GGTTSEEEEECCTTTCCC----CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--ccccccc--CCCCCeEEEecCCCCCCC----CCcEEE
Confidence 4567999999999999999999886 689999999 45544 3332221 134579999999975433 799999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc---C------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG---Y------------------ 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~---~------------------ 534 (570)
++-.++..+ -.....+++++.+.|+|||++++... .
T Consensus 253 ~~~vlh~~~-----------------------d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~ 309 (348)
T 3lst_A 253 LKRILHNWG-----------------------DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAAR 309 (348)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTT
T ss_pred EehhccCCC-----------------------HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcC
Confidence 954332111 12236899999999999999987431 1
Q ss_pred ----CCHHHHHHHHHHCCCeeEEEEecCCCCceEEEE
Q psy2395 535 ----NQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQG 567 (570)
Q Consensus 535 ----~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~ 567 (570)
...+++.+++.++||+.++++. ..+..-++.+
T Consensus 310 ~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~ 345 (348)
T 3lst_A 310 TGQERTAAELEPLFTAAGLRLDRVVG-TSSVMSIAVG 345 (348)
T ss_dssp SCCCCBHHHHHHHHHHTTEEEEEEEE-CSSSCEEEEE
T ss_pred CCcCCCHHHHHHHHHHCCCceEEEEE-CCCCcEEEEE
Confidence 1356788999999999999987 4444444443
No 253
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.16 E-value=1.6e-12 Score=128.38 Aligned_cols=95 Identities=18% Similarity=0.327 Sum_probs=70.5
Q ss_pred cccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE
Q psy2395 377 LIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI 456 (570)
Q Consensus 377 ~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~ 456 (570)
+++......+++.+ ...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++|+. ...+++++
T Consensus 12 l~~~~~~~~i~~~~---~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~-----~~~~v~~~ 80 (245)
T 1yub_A 12 LTSEKVLNQIIKQL---NLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK-----LNTRVTLI 80 (245)
T ss_dssp CCCTTTHHHHHHHC---CCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT-----TCSEEEEC
T ss_pred CCCHHHHHHHHHhc---CCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc-----cCCceEEE
Confidence 33333344444443 12466799999999999999999875 689999999999999988775 23469999
Q ss_pred EcccccccccCCCceeEEEECCCCCCC
Q psy2395 457 KSNWYNNLQNYKKLFNIIVANPPYIPK 483 (570)
Q Consensus 457 ~~D~~~~l~~~~~~fD~Iv~NPPy~~~ 483 (570)
++|+.+......++| .|++||||...
T Consensus 81 ~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 81 HQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp CSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred ECChhhcCcccCCCc-EEEEeCCcccc
Confidence 999976322112578 89999999854
No 254
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.16 E-value=7.1e-11 Score=120.22 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=61.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++|+..++ ..+++++++|+.+. +. .+||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~~-~~--~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIKT-VF--PKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCSS-CC--CCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhhC-Cc--ccCCEEE
Confidence 46779999999999999999865 3699999999999999999987532 14699999999663 22 4899999
Q ss_pred ECCCCCC
Q psy2395 476 ANPPYIP 482 (570)
Q Consensus 476 ~NPPy~~ 482 (570)
+||||..
T Consensus 112 ~n~py~~ 118 (299)
T 2h1r_A 112 ANIPYKI 118 (299)
T ss_dssp EECCGGG
T ss_pred EcCCccc
Confidence 9999974
No 255
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.15 E-value=8.2e-12 Score=122.45 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=82.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE-cccccccccCCCceeEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK-SNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~-~D~~~~l~~~~~~fD~Iv 475 (570)
++.+|||+|||||.++..+++.+ ..+|+|+|+|+.|++.|+++..........++.+.. .|+ . ...||.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~d~~~ 108 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADF----E--QGRPSFTS 108 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGC----C--SCCCSEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHc----C--cCCCCEEE
Confidence 46699999999999999999874 359999999999999987764421000001111111 111 1 12356666
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC----C----------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY----N---------------- 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~----~---------------- 535 (570)
++..|.. +..++.++.++|+|||.+++.+.+ .
T Consensus 109 ~D~v~~~----------------------------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~ 160 (232)
T 3opn_A 109 IDVSFIS----------------------------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVH 160 (232)
T ss_dssp ECCSSSC----------------------------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHH
T ss_pred EEEEhhh----------------------------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchh
Confidence 6655442 146788899999999999886421 0
Q ss_pred --CHHHHHHHHHHCCCeeEEEEe
Q psy2395 536 --QSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 536 --~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
..+.+.+++.++||..+.+..
T Consensus 161 ~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 161 QMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEE
Confidence 134678888999999877654
No 256
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.15 E-value=4e-11 Score=121.21 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=65.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++..++ ...+++++++|+.+. +. .+||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~-~~--~~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKT-DL--PFFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTS-CC--CCCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceecc-cc--hhhcEEE
Confidence 467799999999999999999875 589999999999999999986421 123699999999763 22 3799999
Q ss_pred ECCCCCC
Q psy2395 476 ANPPYIP 482 (570)
Q Consensus 476 ~NPPy~~ 482 (570)
+|+||..
T Consensus 99 ~nlpy~~ 105 (285)
T 1zq9_A 99 ANLPYQI 105 (285)
T ss_dssp EECCGGG
T ss_pred EecCccc
Confidence 9999974
No 257
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.15 E-value=3.3e-10 Score=113.76 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=81.6
Q ss_pred CCCEEEEECCcc---cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc---------
Q psy2395 397 KKIKLLEMGTGS---GAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--------- 464 (570)
Q Consensus 397 ~~~~VLDlGcGt---G~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--------- 464 (570)
...+|||||||+ |.++..+++..+ +.+|+++|+||.|++.|++++.. ..+++++++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 998877766665 58999999999999999998852 346999999997531
Q ss_pred ccCC-CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 465 QNYK-KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 465 ~~~~-~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
...+ .+||+|+++--++..+ + +....+++++.+.|+|||+|++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~---------------------d--~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLS---------------------P--DVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSC---------------------T--TTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCC---------------------c--HHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 0111 4799999975432111 0 0247899999999999999988653
No 258
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.15 E-value=3e-10 Score=113.32 Aligned_cols=135 Identities=11% Similarity=-0.001 Sum_probs=95.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc-cCCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT-KYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
+.+.+|||+|||+|.++..+++. + .+|+++|+|+.+++.|++++..... ....+++++.+|+.+.+ ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEE
Confidence 45679999999999999998876 3 6999999999999999987643100 12457999999997654 689999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC--CCHHHHH---HHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY--NQSNLVR---KLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~l~---~ll~~~Gf 549 (570)
++|.+ +| ..+++.+.+.|+|||++++..+. .....+. +.+.+ -|
T Consensus 144 i~d~~----------------dp--------------~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~-~F 192 (262)
T 2cmg_A 144 FCLQE----------------PD--------------IHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGG-VF 192 (262)
T ss_dssp EESSC----------------CC--------------HHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHT-TC
T ss_pred EECCC----------------Ch--------------HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH-hC
Confidence 99742 01 23788899999999999986543 2333333 33433 37
Q ss_pred eeEEEEecC---CCCceEEEEE
Q psy2395 550 SDIKSWRDL---SGIERVTQGK 568 (570)
Q Consensus 550 ~~i~~~~D~---~g~~R~~~~~ 568 (570)
..+..+... .|..-+++|.
T Consensus 193 ~~~~~~~~~vP~~g~~~~~~as 214 (262)
T 2cmg_A 193 SVAMPFVAPLRILSNKGYIYAS 214 (262)
T ss_dssp SEEEEECCTTCTTCCEEEEEEE
T ss_pred CceEEEEEccCCCcccEEEEee
Confidence 777666543 4555555554
No 259
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.14 E-value=1.2e-10 Score=115.67 Aligned_cols=111 Identities=16% Similarity=0.270 Sum_probs=82.1
Q ss_pred HHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc
Q psy2395 386 LVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ 465 (570)
Q Consensus 386 l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~ 465 (570)
+.+.+.... +++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++.. . .++++|+.+ ++
T Consensus 44 ~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~------~---~~~~~d~~~-~~ 109 (260)
T 2avn_A 44 IGSFLEEYL-KNPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV------K---NVVEAKAED-LP 109 (260)
T ss_dssp HHHHHHHHC-CSCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC------S---CEEECCTTS-CC
T ss_pred HHHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC------C---CEEECcHHH-CC
Confidence 334443333 36789999999999999999865 3689999999999999998753 1 188899865 34
Q ss_pred cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC
Q psy2395 466 NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY 534 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~ 534 (570)
..+++||+|+++.+.... . .....+++++.++|+|||.+++.++.
T Consensus 110 ~~~~~fD~v~~~~~~~~~--------------------~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 FPSGAFEAVLALGDVLSY--------------------V----ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SCTTCEEEEEECSSHHHH--------------------C----SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCEEEEEEcchhhhc--------------------c----ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 335789999996432100 0 01478899999999999999987654
No 260
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.14 E-value=3.4e-11 Score=126.91 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=67.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhh--cccCCCCEEEEEcccccccccC-CCcee
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKK--LTKYNIPIKFIKSNWYNNLQNY-KKLFN 472 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~--~~~~~~~v~~~~~D~~~~l~~~-~~~fD 472 (570)
.++.+|||+|||+|..++.+++.+ .+|+|+|+|+.+++.|+.|+..+ + . .+++++++|+.+.++.. ..+||
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~g--l-~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNE--G-KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCT--T-CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccC--C-CcEEEEECcHHHhhhhccCCCce
Confidence 347899999999999999998653 69999999999999999999874 2 1 36999999998754431 25799
Q ss_pred EEEECCCCCCC
Q psy2395 473 IIVANPPYIPK 483 (570)
Q Consensus 473 ~Iv~NPPy~~~ 483 (570)
+|++||||...
T Consensus 166 vV~lDPPrr~~ 176 (410)
T 3ll7_A 166 YIYVDPARRSG 176 (410)
T ss_dssp EEEECCEEC--
T ss_pred EEEECCCCcCC
Confidence 99999999863
No 261
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.13 E-value=1.8e-10 Score=126.16 Aligned_cols=160 Identities=14% Similarity=0.163 Sum_probs=103.3
Q ss_pred CCccccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCC------------CcEEEEEeCCHHHHHHHHHH
Q psy2395 374 SDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKN------------KIEIIATDISKFALKIAKKN 441 (570)
Q Consensus 374 ~~~~~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~------------~~~V~gvDis~~al~~A~~n 441 (570)
..+|+|++..+.|++.+. +.++.+|+|.+||||.+.+.+.+.... ...++|+|+++.++.+|+.|
T Consensus 197 GqfyTP~~Vv~lmv~l~~---p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMD---PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp CCCCCCHHHHHHHHHHHC---CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred ceECCcHHHHHHHHHhhc---cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 356889999999988763 345679999999999999887654311 24699999999999999999
Q ss_pred HHhhcccCCCCEEEEEccccccc-cc--CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHH
Q psy2395 442 AKKKLTKYNIPIKFIKSNWYNNL-QN--YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNA 518 (570)
Q Consensus 442 ~~~~~~~~~~~v~~~~~D~~~~l-~~--~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~ 518 (570)
+..++. ....+.++|.+... .. ...+||+|++||||.......... ++ |.. .... .....+++.+
T Consensus 274 l~lhg~---~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~---~~-~~~--~~~~---~~~~~Fl~~~ 341 (530)
T 3ufb_A 274 LLLHGL---EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILG---NF-PED--MQTA---ETAMLFLQLI 341 (530)
T ss_dssp HHHHTC---SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHT---TS-CGG--GCCC---BHHHHHHHHH
T ss_pred HHhcCC---ccccccccccccCchhhhcccccceEEEecCCCCccccccccc---cC-chh--cccc---hhHHHHHHHH
Confidence 987532 23567888876421 11 124799999999997432211000 00 000 0001 1123455555
Q ss_pred hhccc-------cCeEEEEEEcCC-----C-HHHHHHHHHHCC
Q psy2395 519 SKYLV-------KNGLLLIEHGYN-----Q-SNLVRKLLFKYG 548 (570)
Q Consensus 519 ~~~Lk-------pgG~l~~~~~~~-----~-~~~l~~ll~~~G 548 (570)
.+.|+ |||++.+++|.+ . ...+++.|.+.+
T Consensus 342 l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~ 384 (530)
T 3ufb_A 342 MRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNF 384 (530)
T ss_dssp HHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHS
T ss_pred HHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcC
Confidence 55565 799999988642 2 345777766543
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=1.6e-10 Score=114.86 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=68.4
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
...+++.+ ...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++++.. ..+++++++|+.+
T Consensus 18 ~~~iv~~~---~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 18 LQKIVSAI---HPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHHH---CCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTT
T ss_pred HHHHHHhc---CCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHh
Confidence 34444443 23467899999999999999999764 6899999999999999999863 3469999999977
Q ss_pred cc-ccC--CCceeEEEECCCCCC
Q psy2395 463 NL-QNY--KKLFNIIVANPPYIP 482 (570)
Q Consensus 463 ~l-~~~--~~~fD~Iv~NPPy~~ 482 (570)
.. +.. .++|| ||+||||..
T Consensus 87 ~~~~~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp CCGGGSCCSSCEE-EEEECCHHH
T ss_pred CCHHHhccCCCeE-EEecCCccc
Confidence 42 221 25788 999999963
No 263
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.12 E-value=1.7e-10 Score=116.39 Aligned_cols=122 Identities=15% Similarity=0.148 Sum_probs=84.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE-Eccccccc--ccCCCceeE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI-KSNWYNNL--QNYKKLFNI 473 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~-~~D~~~~l--~~~~~~fD~ 473 (570)
++.+|||+|||||.++..+++.+ ..+|+|+|+|+.|++.+.++. .++... ..|+.... ..+..+||+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~--------~rv~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQD--------DRVRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTC--------TTEEEECSCCGGGCCGGGCTTCCCSE
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhC--------cccceecccCceecchhhCCCCCCCE
Confidence 56799999999999999998764 469999999999999865432 123222 23442211 111235999
Q ss_pred EEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-C-----------------
Q psy2395 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-N----------------- 535 (570)
Q Consensus 474 Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~----------------- 535 (570)
|++|-.|+. +..++.++.++|+|||.+++.+.+ .
T Consensus 155 v~~d~sf~s----------------------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~ 206 (291)
T 3hp7_A 155 ASIDVSFIS----------------------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESS 206 (291)
T ss_dssp EEECCSSSC----------------------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHH
T ss_pred EEEEeeHhh----------------------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHH
Confidence 999866542 146788899999999999876321 0
Q ss_pred ----CHHHHHHHHHHCCCeeEEEEe
Q psy2395 536 ----QSNLVRKLLFKYGFSDIKSWR 556 (570)
Q Consensus 536 ----~~~~l~~ll~~~Gf~~i~~~~ 556 (570)
..+.+..++.++||....+..
T Consensus 207 ~~~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 207 IHEKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 125577888899999776544
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.12 E-value=2.7e-10 Score=114.05 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=68.0
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
..+++.+ ...++ +|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++++. ..+++++++|+.+.
T Consensus 37 ~~Iv~~~---~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 37 RRIVEAA---RPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHH---CCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGGS
T ss_pred HHHHHhc---CCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC------CCCEEEEECChhhC
Confidence 4444443 23456 99999999999999999765 589999999999999999875 24699999999764
Q ss_pred cccCCCceeEEEECCCCCCC
Q psy2395 464 LQNYKKLFNIIVANPPYIPK 483 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~ 483 (570)
.......||.|++|+||...
T Consensus 104 ~~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 104 PWEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp CGGGSCTTEEEEEEECSSCC
T ss_pred ChhhccCccEEEecCccccc
Confidence 32211368999999999743
No 265
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.11 E-value=2.3e-10 Score=115.96 Aligned_cols=79 Identities=27% Similarity=0.233 Sum_probs=66.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.+++++.. ..+++++++|+.+.. ....+||+|+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~~~-~~~~~fD~Iv 119 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALKVD-LNKLDFNKVV 119 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTTSC-GGGSCCSEEE
T ss_pred CCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhhCC-cccCCccEEE
Confidence 467899999999999999999874 6899999999999999999873 346999999997632 2235799999
Q ss_pred ECCCCCCC
Q psy2395 476 ANPPYIPK 483 (570)
Q Consensus 476 ~NPPy~~~ 483 (570)
+|+||...
T Consensus 120 ~NlPy~is 127 (295)
T 3gru_A 120 ANLPYQIS 127 (295)
T ss_dssp EECCGGGH
T ss_pred EeCccccc
Confidence 99999643
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.06 E-value=1.1e-09 Score=108.19 Aligned_cols=86 Identities=15% Similarity=0.236 Sum_probs=66.1
Q ss_pred HHHHhhc-CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc
Q psy2395 388 DLIVKKT-FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN 466 (570)
Q Consensus 388 ~~~~~~~-~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~ 466 (570)
+.++... ..++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++.. ..+++++++|+.+....
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGGCCCC
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHhCCcc
Confidence 4444332 2467799999999999999999875 6899999999999999998863 24699999999763221
Q ss_pred CCCceeEEEECCCCCC
Q psy2395 467 YKKLFNIIVANPPYIP 482 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~ 482 (570)
....| .|++||||..
T Consensus 92 ~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 92 KNQSY-KIFGNIPYNI 106 (244)
T ss_dssp SSCCC-EEEEECCGGG
T ss_pred cCCCe-EEEEeCCccc
Confidence 12345 7999999963
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.05 E-value=8.3e-11 Score=117.08 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCH-------HHHHHHHHHHHhhcccCCCCEEEEEcccccccccCC-
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISK-------FALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYK- 468 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~-------~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~- 468 (570)
++.+|||+|||+|.+++.+|..+ ++|+|+|+|+ .+++.|++|+..++. ..+++++++|+.+.++...
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDT--AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH--HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC--ccCeEEEECCHHHHHHhhhc
Confidence 46799999999999999999753 6899999999 999999999887532 2359999999977544222
Q ss_pred --CceeEEEECCCCCCC
Q psy2395 469 --KLFNIIVANPPYIPK 483 (570)
Q Consensus 469 --~~fD~Iv~NPPy~~~ 483 (570)
++||+|++||||...
T Consensus 158 ~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHCCCSEEEECCCC---
T ss_pred cCCCccEEEECCCCCCc
Confidence 589999999999653
No 268
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.04 E-value=9.2e-10 Score=115.33 Aligned_cols=127 Identities=19% Similarity=0.135 Sum_probs=95.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.++.+|||+|||+|.++..+++.++ ..+++++|+ +.+++.|++. .+++++.+|+++.++ . ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~~~~---~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPPL---------SGIEHVGGDMFASVP---Q-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTTCCC---C-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhhc---------CCCEEEeCCcccCCC---C-CCEEE
Confidence 4567999999999999999999886 589999999 9999877531 249999999977332 3 99999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE---EcCC-----------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE---HGYN----------------- 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~---~~~~----------------- 535 (570)
++-.++..+ -.....+++++.+.|+|||++++. .+..
T Consensus 273 ~~~~lh~~~-----------------------d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~ 329 (372)
T 1fp1_D 273 LKAVCHNWS-----------------------DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLM 329 (372)
T ss_dssp EESSGGGSC-----------------------HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHH
T ss_pred EecccccCC-----------------------HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHH
Confidence 964332111 112348999999999999999874 2211
Q ss_pred ---------CHHHHHHHHHHCCCeeEEEEecCCC
Q psy2395 536 ---------QSNLVRKLLFKYGFSDIKSWRDLSG 560 (570)
Q Consensus 536 ---------~~~~l~~ll~~~Gf~~i~~~~D~~g 560 (570)
..+++.+++.++||..++++.-..|
T Consensus 330 ~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~ 363 (372)
T 1fp1_D 330 FITVGGRERTEKQYEKLSKLSGFSKFQVACRAFN 363 (372)
T ss_dssp HHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETT
T ss_pred HhccCCccCCHHHHHHHHHHCCCceEEEEEcCCC
Confidence 1356778899999999988774444
No 269
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.03 E-value=1.8e-09 Score=113.06 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=95.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.+..+|||+|||+|.++..+++.+| +.+++++|+ |.+++.|+.+ .+++|+.+|+++.++ .. |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~~~p--~~--D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF---------SGVEHLGGDMFDGVP--KG--DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTTCCC--CC--SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc---------CCCEEEecCCCCCCC--CC--CEEE
Confidence 4567999999999999999999886 689999999 9888776532 359999999987443 23 9999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---cC------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---GY------------------ 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---~~------------------ 534 (570)
+.-..+.- ..+....+++++.+.|+|||++++.- +.
T Consensus 267 ~~~vlh~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~ 323 (368)
T 3reo_A 267 IKWICHDW-----------------------SDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALM 323 (368)
T ss_dssp EESCGGGB-----------------------CHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHH
T ss_pred EechhhcC-----------------------CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHH
Confidence 85332210 11234688999999999999987732 11
Q ss_pred ---------CCHHHHHHHHHHCCCeeEEEEecCCC
Q psy2395 535 ---------NQSNLVRKLLFKYGFSDIKSWRDLSG 560 (570)
Q Consensus 535 ---------~~~~~l~~ll~~~Gf~~i~~~~D~~g 560 (570)
...+++.+++.++||+.+++..-..+
T Consensus 324 ~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~ 358 (368)
T 3reo_A 324 LAYNPGGKERTEKEFQALAMASGFRGFKVASCAFN 358 (368)
T ss_dssp HHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred HhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCC
Confidence 11456889999999999988765443
No 270
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.03 E-value=9.7e-10 Score=114.23 Aligned_cols=134 Identities=14% Similarity=0.174 Sum_probs=99.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.+..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++. .+++++.+|+++.++ .||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~~~p----~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSGS---------NNLTYVGGDMFTSIP----NADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCB---------TTEEEEECCTTTCCC----CCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhcccC---------CCcEEEeccccCCCC----CccEEE
Confidence 3567999999999999999999876 579999999 9999877641 139999999977432 399999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc---CeEEEEEE---cCC--------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK---NGLLLIEH---GYN-------------- 535 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp---gG~l~~~~---~~~-------------- 535 (570)
++-.++..+ -.....+++++.+.|+| ||++++.. +..
T Consensus 252 ~~~~lh~~~-----------------------d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d 308 (352)
T 1fp2_A 252 LKYILHNWT-----------------------DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMD 308 (352)
T ss_dssp EESCGGGSC-----------------------HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHH
T ss_pred eehhhccCC-----------------------HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhcc
Confidence 954332111 11234899999999999 99987742 211
Q ss_pred -----------CHHHHHHHHHHCCCeeEEEEecCCCCceEEEEE
Q psy2395 536 -----------QSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGK 568 (570)
Q Consensus 536 -----------~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~ 568 (570)
..+++.++++++||..++++. ..|...++.++
T Consensus 309 ~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~ 351 (352)
T 1fp2_A 309 VNMACLNGKERNEEEWKKLFIEAGFQHYKISP-LTGFLSLIEIY 351 (352)
T ss_dssp HHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE-EETTEEEEEEE
T ss_pred HHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe-cCCCcEEEEEe
Confidence 135678899999999998876 45555555543
No 271
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.00 E-value=1.1e-09 Score=114.20 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=76.8
Q ss_pred HHHHhhcCCCCCEEEEECCc------ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccc
Q psy2395 388 DLIVKKTFEKKIKLLEMGTG------SGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWY 461 (570)
Q Consensus 388 ~~~~~~~~~~~~~VLDlGcG------tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~ 461 (570)
+.++..+..++.+||||||| +|..++.+++.+.++++|+|+|+|+.|. . ...+++|+++|+.
T Consensus 207 e~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~-----~~~rI~fv~GDa~ 274 (419)
T 3sso_A 207 DRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------V-----DELRIRTIQGDQN 274 (419)
T ss_dssp HHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------G-----CBTTEEEEECCTT
T ss_pred HHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------h-----cCCCcEEEEeccc
Confidence 44444344567899999999 7777887776542368999999999972 1 2346999999996
Q ss_pred cccccC------CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 462 NNLQNY------KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 462 ~~l~~~------~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+. +.. .++||+|++|--.. ...+..+++++.++|||||++++.
T Consensus 275 dl-pf~~~l~~~d~sFDlVisdgsH~--------------------------~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 275 DA-EFLDRIARRYGPFDIVIDDGSHI--------------------------NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CH-HHHHHHHHHHCCEEEEEECSCCC--------------------------HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cc-chhhhhhcccCCccEEEECCccc--------------------------chhHHHHHHHHHHhcCCCeEEEEE
Confidence 52 222 37899999963110 134578899999999999999984
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.99 E-value=7.4e-10 Score=112.54 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=67.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc---ccCC-Cce
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL---QNYK-KLF 471 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l---~~~~-~~f 471 (570)
.++.+|||+|||+|.++..+++.++ +.+|+|+|+|+.|++.|++|+..+ +.+++++++|+.+.. .... .+|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~l~~~g~~~~ 99 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEF----SDRVSLFKVSYREADFLLKTLGIEKV 99 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHHHHhcCCCCC
Confidence 4678999999999999999999875 589999999999999999999864 357999999985531 1111 479
Q ss_pred eEEEECCCCC
Q psy2395 472 NIIVANPPYI 481 (570)
Q Consensus 472 D~Iv~NPPy~ 481 (570)
|.|++|||+.
T Consensus 100 D~Vl~D~gvS 109 (301)
T 1m6y_A 100 DGILMDLGVS 109 (301)
T ss_dssp EEEEEECSCC
T ss_pred CEEEEcCccc
Confidence 9999999863
No 273
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.98 E-value=4.7e-09 Score=109.70 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=93.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
.+..+|||+|||+|.++..+++.+| +.+++++|+ |.+++.|+. ..+++|+.+|+++.++ .+ |+|+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~~~p--~~--D~v~ 264 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFKEVP--SG--DTIL 264 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTTCCC--CC--SEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCCCCC--CC--CEEE
Confidence 4567999999999999999999886 689999999 888877653 2369999999987443 23 9999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE---cC------------------
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH---GY------------------ 534 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~---~~------------------ 534 (570)
+.-..+. -..+....+++++.+.|+|||++++.- +.
T Consensus 265 ~~~vlh~-----------------------~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m 321 (364)
T 3p9c_A 265 MKWILHD-----------------------WSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIM 321 (364)
T ss_dssp EESCGGG-----------------------SCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHH
T ss_pred ehHHhcc-----------------------CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHH
Confidence 8432210 011344689999999999999997732 11
Q ss_pred ---------CCHHHHHHHHHHCCCeeEEEEecC
Q psy2395 535 ---------NQSNLVRKLLFKYGFSDIKSWRDL 558 (570)
Q Consensus 535 ---------~~~~~l~~ll~~~Gf~~i~~~~D~ 558 (570)
...+++.++++++||+.+++..-.
T Consensus 322 ~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 322 LAHNPGGRERYEREFQALARGAGFTGVKSTYIY 354 (364)
T ss_dssp HHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HhcccCCccCCHHHHHHHHHHCCCceEEEEEcC
Confidence 013567889999999999887643
No 274
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.95 E-value=1.4e-09 Score=106.61 Aligned_cols=88 Identities=10% Similarity=0.133 Sum_probs=71.7
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
-+.+...+.... .++.+|||||||+|-+++.++...+ ..+|+|+|+|+.+++.++.|+.. ++.+..+.+.|...
T Consensus 119 lD~fY~~i~~~i-~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~----~g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 119 LDEFYRELFRHL-PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTR----LNVPHRTNVADLLE 192 (281)
T ss_dssp HHHHHHHHGGGS-CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHH----TTCCEEEEECCTTT
T ss_pred HHHHHHHHHhcc-CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHh----cCCCceEEEeeecc
Confidence 344555555544 4477999999999999999987755 68999999999999999999987 45668999999976
Q ss_pred ccccCCCceeEEEECC
Q psy2395 463 NLQNYKKLFNIIVANP 478 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NP 478 (570)
..+ .++||+++++-
T Consensus 193 ~~p--~~~~DvaL~lk 206 (281)
T 3lcv_B 193 DRL--DEPADVTLLLK 206 (281)
T ss_dssp SCC--CSCCSEEEETT
T ss_pred cCC--CCCcchHHHHH
Confidence 554 47899999963
No 275
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.93 E-value=4.9e-09 Score=109.14 Aligned_cols=133 Identities=16% Similarity=0.211 Sum_probs=98.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVA 476 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~ 476 (570)
+..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.|++ ..+++++.+|+++..+ .||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~~~----~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFKSIP----SADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTTCCC----CCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc---------CCCcEEEeCccCCCCC----CceEEEE
Confidence 557999999999999999999886 579999999 788876653 1249999999987322 4999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc---CeEEEEEE---cCC---------------
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK---NGLLLIEH---GYN--------------- 535 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp---gG~l~~~~---~~~--------------- 535 (570)
+-.++..+ -.....+++++.+.|+| ||++++.. +..
T Consensus 258 ~~vlh~~~-----------------------d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 314 (358)
T 1zg3_A 258 KWVLHDWN-----------------------DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDL 314 (358)
T ss_dssp ESCGGGSC-----------------------HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHH
T ss_pred cccccCCC-----------------------HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCH
Confidence 65433111 11235899999999999 99887732 211
Q ss_pred -----------CHHHHHHHHHHCCCeeEEEEecCCCCceEEEEE
Q psy2395 536 -----------QSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGK 568 (570)
Q Consensus 536 -----------~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~ 568 (570)
..+++.+++.++||+.++++. ..+...++.++
T Consensus 315 ~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~ 357 (358)
T 1zg3_A 315 VMLTMFLGKERTKQEWEKLIYDAGFSSYKITP-ISGFKSLIEVY 357 (358)
T ss_dssp HHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE-ETTTEEEEEEE
T ss_pred HHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe-cCCCcEEEEEe
Confidence 235677889999999998887 45655555543
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.93 E-value=7.7e-09 Score=102.66 Aligned_cols=148 Identities=12% Similarity=0.171 Sum_probs=101.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHh-------cCC----CcEEEEEeCCH---HHHH-----------HHHHHHHhh-----
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIY-------SKN----KIEIIATDISK---FALK-----------IAKKNAKKK----- 445 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~-------~~~----~~~V~gvDis~---~al~-----------~A~~n~~~~----- 445 (570)
.++.+|||+|||+|..++.+++. .|. ..+++++|..| +.+. .|+.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999999887664 332 25899999987 4433 566665531
Q ss_pred -----ccc-CCCCEEEEEcccccccccCCC----ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHH
Q psy2395 446 -----LTK-YNIPIKFIKSNWYNNLQNYKK----LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIV 515 (570)
Q Consensus 446 -----~~~-~~~~v~~~~~D~~~~l~~~~~----~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l 515 (570)
... ...+++++.+|+.+.++.... +||+|+.+| |.+... |.+ ....++
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~-----------p~l----------w~~~~l 196 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKN-----------PDM----------WTQNLF 196 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTC-----------GGG----------CCHHHH
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccC-----------hhh----------cCHHHH
Confidence 001 124688999999876665433 799999986 222211 100 125788
Q ss_pred HHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 516 KNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 516 ~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
+.+.+.|+|||+++. +.....+++.|..+||.+. ..+...++..++.|.+
T Consensus 197 ~~l~~~L~pGG~l~t---ysaa~~vrr~L~~aGF~v~-~~~g~~~kr~m~~a~~ 246 (257)
T 2qy6_A 197 NAMARLARPGGTLAT---FTSAGFVRRGLQEAGFTMQ-KRKGFGRKREMLCGVM 246 (257)
T ss_dssp HHHHHHEEEEEEEEE---SCCBHHHHHHHHHHTEEEE-EECCSTTCCCEEEEEE
T ss_pred HHHHHHcCCCcEEEE---EeCCHHHHHHHHHCCCEEE-eCCCCCCCCceEEEEe
Confidence 899999999999874 3344578889999999854 4555666667777765
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.92 E-value=2.6e-09 Score=107.36 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=62.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-ccCCC----
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKN-KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-QNYKK---- 469 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~-~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-~~~~~---- 469 (570)
.++.+|||+|||+|.++..++..+.. ..+|+|+|+|+.+++.++++. . .+++++++|+.+.. +....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~------~~v~~i~~D~~~~~~~~~~~~~~~ 113 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G------ELLELHAGDALTFDFGSIARPGDE 113 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G------GGEEEEESCGGGCCGGGGSCSSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C------CCcEEEECChhcCChhHhcccccC
Confidence 46789999999999999999987642 244999999999999999984 1 24899999997632 21111
Q ss_pred ceeEEEECCCCCC
Q psy2395 470 LFNIIVANPPYIP 482 (570)
Q Consensus 470 ~fD~Iv~NPPy~~ 482 (570)
..+.||+|+||..
T Consensus 114 ~~~~vv~NlPY~i 126 (279)
T 3uzu_A 114 PSLRIIGNLPYNI 126 (279)
T ss_dssp CCEEEEEECCHHH
T ss_pred CceEEEEccCccc
Confidence 3468999999964
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.91 E-value=4.6e-09 Score=103.88 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=61.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc-ccCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL-QNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l-~~~~~~fD~I 474 (570)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.++++ . ..+++++++|+.+.. +...+.| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-G------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-C------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-c------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 467799999999999999999763 47999999999999999877 2 236999999997632 2211234 89
Q ss_pred EECCCCCC
Q psy2395 475 VANPPYIP 482 (570)
Q Consensus 475 v~NPPy~~ 482 (570)
++||||..
T Consensus 100 v~NlPy~i 107 (249)
T 3ftd_A 100 VGNLPYNV 107 (249)
T ss_dssp EEECCTTT
T ss_pred EEECchhc
Confidence 99999963
No 279
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.90 E-value=6.3e-10 Score=111.14 Aligned_cols=109 Identities=14% Similarity=0.114 Sum_probs=72.1
Q ss_pred cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE--EcccccccccCCCce
Q psy2395 394 TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI--KSNWYNNLQNYKKLF 471 (570)
Q Consensus 394 ~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~f 471 (570)
...++.+|||+|||+|.++..+++. .+|+|||+++ ++..++++... ....+.++.++ ++|+.+ ++ +++|
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~-~~~~~~~v~~~~~~~D~~~-l~--~~~f 141 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRI-TESYGWNIVKFKSRVDIHT-LP--VERT 141 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCC-CCBTTGGGEEEECSCCTTT-SC--CCCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhh-hhccCCCeEEEecccCHhH-CC--CCCC
Confidence 3456789999999999999999865 4799999999 53322211100 00012258899 999965 33 4789
Q ss_pred eEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH--HHHHHHHhhccccCe--EEEEEE
Q psy2395 472 NIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI--KEIVKNASKYLVKNG--LLLIEH 532 (570)
Q Consensus 472 D~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~--~~~l~~~~~~LkpgG--~l~~~~ 532 (570)
|+|+||..++... . ..+.. ..+++.+.++|+||| .+++.+
T Consensus 142 D~V~sd~~~~~~~-~--------------------~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 142 DVIMCDVGESSPK-W--------------------SVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp SEEEECCCCCCSC-H--------------------HHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEeCcccCCc-c--------------------chhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 9999986522110 0 00111 137888899999999 888854
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.87 E-value=1.6e-09 Score=107.52 Aligned_cols=81 Identities=9% Similarity=0.124 Sum_probs=64.4
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc---cCC---CCEEEEEcccccccccCCCcee
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT---KYN---IPIKFIKSNWYNNLQNYKKLFN 472 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~---~~~---~~v~~~~~D~~~~l~~~~~~fD 472 (570)
.+|||+|||+|..++.+|..+ ++|+++|+++.++..++.|+..... .++ .+++++++|..+.+.....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g---~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG---CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT---CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 799999999999999999874 5799999999988888877653210 011 3699999999876654445799
Q ss_pred EEEECCCCCC
Q psy2395 473 IIVANPPYIP 482 (570)
Q Consensus 473 ~Iv~NPPy~~ 482 (570)
+|++||||..
T Consensus 167 vV~lDP~y~~ 176 (258)
T 2oyr_A 167 VVYLDPMFPH 176 (258)
T ss_dssp EEEECCCCCC
T ss_pred EEEEcCCCCC
Confidence 9999999964
No 281
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.87 E-value=1.1e-08 Score=101.81 Aligned_cols=124 Identities=12% Similarity=0.096 Sum_probs=79.9
Q ss_pred HHHHHHHHhhcC--CCCCEEEEECCcc--cHHHHHHHH-hcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEc
Q psy2395 384 ELLVDLIVKKTF--EKKIKLLEMGTGS--GAIAIAIAI-YSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKS 458 (570)
Q Consensus 384 ~~l~~~~~~~~~--~~~~~VLDlGcGt--G~i~l~la~-~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~ 458 (570)
+.++..++..+. ....+|||||||+ +.....+++ ..+ .++|+++|+||.|++.|+.++... ...+++|+++
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P-~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~a 138 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAP-ESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCT-TCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEEC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEe
Confidence 344444444433 2346899999997 333344444 444 789999999999999999988631 1236999999
Q ss_pred cccccc---ccC--CCcee-----EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEE
Q psy2395 459 NWYNNL---QNY--KKLFN-----IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLL 528 (570)
Q Consensus 459 D~~~~l---~~~--~~~fD-----~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l 528 (570)
|+.+.. ..+ ...|| .|++|--++...+ .+....+++.+.+.|+|||+|
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d----------------------~~~p~~~l~~l~~~L~PGG~L 196 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLD----------------------EDDAVGIVRRLLEPLPSGSYL 196 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCG----------------------GGCHHHHHHHHHTTSCTTCEE
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCc----------------------hhhHHHHHHHHHHhCCCCcEE
Confidence 997641 100 13455 5777643321110 011367889999999999999
Q ss_pred EEEEc
Q psy2395 529 LIEHG 533 (570)
Q Consensus 529 ~~~~~ 533 (570)
++...
T Consensus 197 vls~~ 201 (277)
T 3giw_A 197 AMSIG 201 (277)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98653
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.87 E-value=3.9e-09 Score=98.05 Aligned_cols=104 Identities=13% Similarity=0.024 Sum_probs=79.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---CCCcee
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---YKKLFN 472 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~~~~fD 472 (570)
.++.+|||+|||+ +++|+|+.|++.|+++... +++++++|+.+. +. .+++||
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-------~~~~~~~d~~~~-~~~~~~~~~fD 65 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-------EGRVSVENIKQL-LQSAHKESSFD 65 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-------TSEEEEEEGGGG-GGGCCCSSCEE
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-------CcEEEEechhcC-ccccCCCCCEe
Confidence 5788999999996 2389999999999987642 388999999653 33 357899
Q ss_pred EEEECCCCCCC-CCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCC----------CHHHHH
Q psy2395 473 IIVANPPYIPK-GDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYN----------QSNLVR 541 (570)
Q Consensus 473 ~Iv~NPPy~~~-~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~l~ 541 (570)
+|+++-.++.. . ....+++++.++|||||++++..+.. ....+.
T Consensus 66 ~V~~~~~l~~~~~-------------------------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 120 (176)
T 2ld4_A 66 IILSGLVPGSTTL-------------------------HSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLC 120 (176)
T ss_dssp EEEECCSTTCCCC-------------------------CCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHH
T ss_pred EEEECChhhhccc-------------------------CHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHH
Confidence 99996443321 1 12688999999999999999865421 267889
Q ss_pred HHHHHCCC
Q psy2395 542 KLLFKYGF 549 (570)
Q Consensus 542 ~ll~~~Gf 549 (570)
+.+.++||
T Consensus 121 ~~l~~aGf 128 (176)
T 2ld4_A 121 SALTLSGL 128 (176)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 99999999
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.87 E-value=1e-07 Score=95.79 Aligned_cols=179 Identities=15% Similarity=0.182 Sum_probs=116.9
Q ss_pred CeeeeecCCccccch----hHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Q psy2395 367 GLVLNITSDVLIPRP----ETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA 442 (570)
Q Consensus 367 ~~~~~v~~~~~~pr~----~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~ 442 (570)
|.-+.++....+... -.+.|+...+.. .+++.+||=||-|.|..+..+++..+ ..+|+.|||++..++.|++.+
T Consensus 50 G~~L~LDg~~q~te~De~~YhE~l~h~~l~~-~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~l 127 (294)
T 3o4f_A 50 GRVMALDGVVQTTERDEFIYHEMMTHVPLLA-HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYL 127 (294)
T ss_dssp EEEEEETTEEEEETTTHHHHHHHHHHHHHHH-SSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHC
T ss_pred ceEEEECCchhhccccHHHHHHHHHHHHHhh-CCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcC
Confidence 444555544433322 233444433322 35678999999999999999987643 579999999999999999986
Q ss_pred Hhh--cccCCCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhh
Q psy2395 443 KKK--LTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK 520 (570)
Q Consensus 443 ~~~--~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~ 520 (570)
... +.-.+.+++++.+|+...+....++||+|+.+.+--.. |...|+ -..+++.+.+
T Consensus 128 p~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~-------------~~~~L~--------t~eFy~~~~~ 186 (294)
T 3o4f_A 128 PNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIG-------------PGESLF--------TSAFYEGCKR 186 (294)
T ss_dssp HHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCC-------------TTCCSS--------CCHHHHHHHH
T ss_pred ccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCC-------------Cchhhc--------CHHHHHHHHH
Confidence 432 11134579999999999887666899999998642110 001111 1477888899
Q ss_pred ccccCeEEEEE--EcCCCHHHHHHHHHHC--CCeeEEEEec----C-CCCceEEEEE
Q psy2395 521 YLVKNGLLLIE--HGYNQSNLVRKLLFKY--GFSDIKSWRD----L-SGIERVTQGK 568 (570)
Q Consensus 521 ~LkpgG~l~~~--~~~~~~~~l~~ll~~~--Gf~~i~~~~D----~-~g~~R~~~~~ 568 (570)
.|+|||+++.. .+..+.+.+...++.. -|..+..+.- + .|..-+++|.
T Consensus 187 ~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as 243 (294)
T 3o4f_A 187 CLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp TEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEE
T ss_pred HhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEE
Confidence 99999999884 3444555554444332 2776665542 2 3555666664
No 284
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.87 E-value=1.1e-09 Score=109.96 Aligned_cols=108 Identities=9% Similarity=0.081 Sum_probs=72.1
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE--EcccccccccCCCcee
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI--KSNWYNNLQNYKKLFN 472 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~fD 472 (570)
..++.+|||+|||+|.++..+++. .+|+|||+++ ++..++++.... ...+.++.++ ++|+.+ ++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~-l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLV-ETFGWNLITFKSKVDVTK-ME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCC-CCTTGGGEEEECSCCGGG-CC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhh-hhcCCCeEEEeccCcHhh-CC--CCCcC
Confidence 356789999999999999999865 4799999999 543332211000 0012268899 999865 33 47899
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHH--HHHHHHHhhccccCe--EEEEEE
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI--KEIVKNASKYLVKNG--LLLIEH 532 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~--~~~l~~~~~~LkpgG--~l~~~~ 532 (570)
+|+||..++... . ..+.. ..+++.+.++|+||| .+++.+
T Consensus 151 ~Vvsd~~~~~~~-~--------------------~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIGESNPT-A--------------------AVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCCCCCSC-H--------------------HHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCCcCCCc-h--------------------hhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 999986532110 0 00111 137888899999999 888754
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.81 E-value=5.1e-08 Score=101.12 Aligned_cols=146 Identities=8% Similarity=0.038 Sum_probs=99.3
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhccc---CCCCEEEEEcccccccccCCCce
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTK---YNIPIKFIKSNWYNNLQNYKKLF 471 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~---~~~~v~~~~~D~~~~l~~~~~~f 471 (570)
+.++.+|||+|||.|.=+..++.... +..|+++|+|+.-+...++|+.+.+.. ...++.+...|.........+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 46788999999999999999998764 568999999999999999999876421 22468899999865433334789
Q ss_pred eEEEECCCCCCCCCc-ccCCCCcc--ccccccccccCCCh-HHHHHHHHHHhhccccCeEEEEEEc----CCCHHHHHHH
Q psy2395 472 NIIVANPPYIPKGDI-HLNKGDLR--FEPINALTDYSNGL-SSIKEIVKNASKYLVKNGLLLIEHG----YNQSNLVRKL 543 (570)
Q Consensus 472 D~Iv~NPPy~~~~~~-~~~~~~~~--~ep~~al~~~~~gl-~~~~~~l~~~~~~LkpgG~l~~~~~----~~~~~~l~~l 543 (570)
|.|++|+|-...... ....+... ..+.. ...+ ..-.+++..+.++|||||++++.+. ..+...+..+
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~-----~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~ 299 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKE-----RQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGA 299 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHH-----HHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHH
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHH-----HHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHH
Confidence 999999995431000 00011111 11100 0111 2346799999999999999988653 3445555555
Q ss_pred HHH
Q psy2395 544 LFK 546 (570)
Q Consensus 544 l~~ 546 (570)
|+.
T Consensus 300 L~~ 302 (359)
T 4fzv_A 300 IEL 302 (359)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 286
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.80 E-value=3.2e-09 Score=105.20 Aligned_cols=80 Identities=10% Similarity=0.076 Sum_probs=60.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc-cccC---CCce
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN-LQNY---KKLF 471 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~-l~~~---~~~f 471 (570)
.++.+|||+|||+|.++. +++ .. ..+|+|+|+|+.+++.+++++.. ..+++++++|+.+. ++.. .+..
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~~ 91 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMTFNFGELAEKMGQP 91 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGGCCHHHHHHHHTSC
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhhCCHHHhhcccCCc
Confidence 466799999999999999 653 32 22399999999999999988753 13699999999763 2211 0245
Q ss_pred eEEEECCCCCCC
Q psy2395 472 NIIVANPPYIPK 483 (570)
Q Consensus 472 D~Iv~NPPy~~~ 483 (570)
|.|++|+||...
T Consensus 92 ~~vvsNlPY~i~ 103 (252)
T 1qyr_A 92 LRVFGNLPYNIS 103 (252)
T ss_dssp EEEEEECCTTTH
T ss_pred eEEEECCCCCcc
Confidence 899999999753
No 287
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.80 E-value=4.2e-09 Score=107.29 Aligned_cols=108 Identities=6% Similarity=-0.015 Sum_probs=71.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeC----CHHHHHHHHHHHHhhcccCCCCEEEEEc-ccccccccCCC
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDI----SKFALKIAKKNAKKKLTKYNIPIKFIKS-NWYNNLQNYKK 469 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDi----s~~al~~A~~n~~~~~~~~~~~v~~~~~-D~~~~l~~~~~ 469 (570)
..++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. .... ...++.|+++ |+... + ..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~---~~~~v~~~~~~D~~~l-~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTY---GWNLVRLQSGVDVFFI-P--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCST---TGGGEEEECSCCTTTS-C--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhc---CCCCeEEEeccccccC-C--cC
Confidence 356789999999999999999965 36999999 564432111 1100 0135899999 88653 2 36
Q ss_pred ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH--HHHHHHHhhccccCeEEEEEEcCC
Q psy2395 470 LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI--KEIVKNASKYLVKNGLLLIEHGYN 535 (570)
Q Consensus 470 ~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 535 (570)
+||+|+||.++. .... . .+.. ..++..+.++|+|||.|++.+...
T Consensus 148 ~fD~V~sd~~~~-~g~~---------~-----------~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 148 RCDTLLCDIGES-SPNP---------T-----------VEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCSEEEECCCCC-CSSH---------H-----------HHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCCEEEECCccc-cCcc---------h-----------hhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 899999986543 1100 0 0111 147788889999999998865433
No 288
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.76 E-value=2.6e-08 Score=96.79 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=66.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
+.+...+... .++.+|||+|||+|.+++.++ + ..+++|+|||+.+++.++.++.. ++.+..+..+|....
T Consensus 94 d~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~----~g~~~~~~v~D~~~~ 163 (253)
T 3frh_A 94 DTLYDFIFSA--ETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFARE----KDWDFTFALQDVLCA 163 (253)
T ss_dssp HHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHH----TTCEEEEEECCTTTS
T ss_pred HHHHHHHhcC--CCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHh----cCCCceEEEeecccC
Confidence 3344444443 457799999999999999987 3 58999999999999999999886 466789999999765
Q ss_pred cccCCCceeEEEEC
Q psy2395 464 LQNYKKLFNIIVAN 477 (570)
Q Consensus 464 l~~~~~~fD~Iv~N 477 (570)
.+ .++||+|+++
T Consensus 164 ~~--~~~~DvvLll 175 (253)
T 3frh_A 164 PP--AEAGDLALIF 175 (253)
T ss_dssp CC--CCBCSEEEEE
T ss_pred CC--CCCcchHHHH
Confidence 44 3699999996
No 289
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.75 E-value=1.2e-08 Score=112.84 Aligned_cols=76 Identities=12% Similarity=0.269 Sum_probs=63.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc-cCCCceeEE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ-NYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fD~I 474 (570)
.++.+|||||||+|.++..||+.+ ++|+|||+++.+++.|+..+..+ ...+++|.++|+.+... ..+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEEN---PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTS---TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhc---CCCceEEEECCHHHHhhhccCCCccEE
Confidence 357899999999999999999874 79999999999999999999863 23479999999966432 224689999
Q ss_pred EEC
Q psy2395 475 VAN 477 (570)
Q Consensus 475 v~N 477 (570)
+|.
T Consensus 139 ~~~ 141 (569)
T 4azs_A 139 IGL 141 (569)
T ss_dssp EEE
T ss_pred EEC
Confidence 994
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.67 E-value=3e-07 Score=87.49 Aligned_cols=115 Identities=9% Similarity=0.076 Sum_probs=79.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc-------------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN------------- 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~------------- 463 (570)
+..+|||+|| |+-++.+|+. + +.+|+++|.+++..+.|++|+..++.....+++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 4679999998 5778888864 3 589999999999999999999975310044799999997543
Q ss_pred -cc-------cC--CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE--
Q psy2395 464 -LQ-------NY--KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE-- 531 (570)
Q Consensus 464 -l~-------~~--~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~-- 531 (570)
++ .. .++||+|+.+-.+. ...+..+.+.|+|||.+++.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~------------------------------~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFR------------------------------VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSH------------------------------HHHHHHHHHHCSSCEEEEETTG
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCc------------------------------hhHHHHHHHhcCCCeEEEEeCC
Confidence 11 11 26899999964211 23444566799999999763
Q ss_pred EcCCCHHHHHHHHH
Q psy2395 532 HGYNQSNLVRKLLF 545 (570)
Q Consensus 532 ~~~~~~~~l~~ll~ 545 (570)
.....-..+.+++.
T Consensus 156 ~~r~~y~~v~~~~~ 169 (202)
T 3cvo_A 156 SQRRWQHQVEEFLG 169 (202)
T ss_dssp GGCSSGGGGHHHHC
T ss_pred cCCcchHHHHHHHh
Confidence 12333444555554
No 291
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.55 E-value=2e-07 Score=103.00 Aligned_cols=104 Identities=15% Similarity=0.222 Sum_probs=72.9
Q ss_pred CCEEEEECCcccHHH---HHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 398 KIKLLEMGTGSGAIA---IAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~---l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
...|||+|||+|.+. +.++.......+|+|||.|| +...|++....|+ .+.+|+++++|+.+... ++++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~--~~dkVtVI~gd~eev~L--PEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE--WGSQVTVVSSDMREWVA--PEKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT--TGGGEEEEESCTTTCCC--SSCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc--CCCeEEEEeCcceeccC--CcccCEE
Confidence 357999999999994 44444433234899999998 4557888887764 45679999999976432 3799999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
||-. +..++..+++ -..+....++|||||.++
T Consensus 433 VSEw--------------------MG~fLl~E~m---levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSEL--------------------LGSFADNELS---PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCC--------------------CBTTBGGGCH---HHHHHHHGGGEEEEEEEE
T ss_pred EEEc--------------------CcccccccCC---HHHHHHHHHhcCCCcEEc
Confidence 9932 0111111222 356778889999999876
No 292
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.43 E-value=2.4e-07 Score=92.14 Aligned_cols=119 Identities=14% Similarity=0.046 Sum_probs=86.5
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---cCCCceeEE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---NYKKLFNII 474 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---~~~~~fD~I 474 (570)
+..+||+.+|||.+++.+... +.+++.+|.++.+++..++|+.. ..++.+++.|.+..+. .+..+||+|
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred CCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 557899999999999998862 46999999999999999999863 4569999999877554 223579999
Q ss_pred EECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhh--ccccCeEEEEEEcCCCH---HHHHHHHHHCCC
Q psy2395 475 VANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK--YLVKNGLLLIEHGYNQS---NLVRKLLFKYGF 549 (570)
Q Consensus 475 v~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~---~~l~~ll~~~Gf 549 (570)
+++|||-... .+.++++.+.+ .+.|+|++++=.|.-+. ..+.+-+++.|.
T Consensus 164 fiDPPYe~k~-------------------------~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 164 FIDPSYERKE-------------------------EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp EECCCCCSTT-------------------------HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred EECCCCCCCc-------------------------HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 9999996322 23444443333 46789998875555443 344444555565
No 293
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.41 E-value=3e-07 Score=81.89 Aligned_cols=83 Identities=20% Similarity=0.250 Sum_probs=61.7
Q ss_pred ccccch--hHHHHHHHHHhhcCCCCCEEEEECCccc-HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCC
Q psy2395 376 VLIPRP--ETELLVDLIVKKTFEKKIKLLEMGTGSG-AIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIP 452 (570)
Q Consensus 376 ~~~pr~--~t~~l~~~~~~~~~~~~~~VLDlGcGtG-~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~ 452 (570)
.+.|+. --+.+++++.+.. .++.+|||+|||+| ..+..|+... +..|+++|++|.++.
T Consensus 13 ~~~~~~~~m~e~LaeYI~~~~-~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------- 73 (153)
T 2k4m_A 13 GLVPRGSHMWNDLAVYIIRCS-GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------- 73 (153)
T ss_dssp CCCCCCCHHHHHHHHHHHHHS-CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------
T ss_pred CcccchhhHHHHHHHHHHhcC-CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------
Confidence 345552 2456677766544 34579999999999 6999999743 478999999998865
Q ss_pred EEEEEcccccccccCCCceeEE-EECCC
Q psy2395 453 IKFIKSNWYNNLQNYKKLFNII-VANPP 479 (570)
Q Consensus 453 v~~~~~D~~~~l~~~~~~fD~I-v~NPP 479 (570)
+++.|++++....-..||+| -.|||
T Consensus 74 --~v~dDiF~P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 74 --IVRDDITSPRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp --EECCCSSSCCHHHHTTEEEEEEESCC
T ss_pred --eEEccCCCCcccccCCcCEEEEcCCC
Confidence 78899988654322489999 66987
No 294
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.40 E-value=4.7e-07 Score=99.99 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=71.5
Q ss_pred CCEEEEECCcccHHHHHHHHhc---C---------CCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS---K---------NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ 465 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~---~---------~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~ 465 (570)
+..|||+|||+|.++...++.. . ...+|+|||.|+.++..++.... |+ .+.+|+++.+|+.+...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--TTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--CCCeEEEEeCchhhccc
Confidence 4589999999999964332211 1 13599999999988876665544 32 45679999999976432
Q ss_pred c----CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 466 N----YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 466 ~----~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
. ..+++|+|||-.. ..++ ..+.....+..+.++|+|||+++
T Consensus 487 p~~~~~~ekVDIIVSElm--------------------Gsfl---~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL--------------------GSFG---DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC--------------------BTTB---GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc--------------------cccc---chhccHHHHHHHHHhCCCCcEEE
Confidence 0 1378999999321 0011 11234567777789999999876
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.27 E-value=1.1e-05 Score=83.57 Aligned_cols=185 Identities=14% Similarity=0.161 Sum_probs=110.4
Q ss_pred cCeeeeecCCccccchhHHHHHHHHHhh--cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 366 YGLVLNITSDVLIPRPETELLVDLIVKK--TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 366 ~~~~~~v~~~~~~pr~~t~~l~~~~~~~--~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
+|..+.++........+ +...+.+... ...++.+||=+|-|.|..+..+.+. + ..+|+.|||+|..++.|++.+.
T Consensus 173 ~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp 249 (381)
T 3c6k_A 173 FGNILILSGDVNLAESD-LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMR 249 (381)
T ss_dssp TEEEEEETTEEEEETTC-HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCC
T ss_pred cceEEEECCceeeeCCh-HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhch
Confidence 35555555444433333 2333333221 1235679999999999999999876 3 3699999999999999998754
Q ss_pred hhc-ccC----CCCEEEEEccccccccc---CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHH
Q psy2395 444 KKL-TKY----NIPIKFIKSNWYNNLQN---YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIV 515 (570)
Q Consensus 444 ~~~-~~~----~~~v~~~~~D~~~~l~~---~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l 515 (570)
... ... ..+++++.+|+...+.. ..++||+|+.+.+-.+... .|. +.....+.+.++
T Consensus 250 ~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~----------~p~-----g~a~~Lft~eFy 314 (381)
T 3c6k_A 250 KTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST----------SPE-----EDSTWEFLRLIL 314 (381)
T ss_dssp C----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC----------C---------CHHHHHHHHH
T ss_pred hhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccC----------ccc-----CcchHHHHHHHH
Confidence 210 001 23589999999876642 2368999999853211100 000 000113557899
Q ss_pred HHHhhccccCeEEEEEEc-CCCHHH---HHHHHHHCCCeeEEEE------ecCCCCceEEEEEe
Q psy2395 516 KNASKYLVKNGLLLIEHG-YNQSNL---VRKLLFKYGFSDIKSW------RDLSGIERVTQGKI 569 (570)
Q Consensus 516 ~~~~~~LkpgG~l~~~~~-~~~~~~---l~~ll~~~Gf~~i~~~------~D~~g~~R~~~~~~ 569 (570)
+.+.+.|+|||+++...+ ....+. +.+.+++. |..+.+. +-+.|..-+++|.+
T Consensus 315 ~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v-F~~v~~~~~~~~VPSy~~~W~F~~aSK 377 (381)
T 3c6k_A 315 DLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL-YCPVEFSKEIVCVPSYLELWVFYTVWK 377 (381)
T ss_dssp HHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS-SSCEEEEEEEECCGGGSSCEEEEEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh-CCcceEeeEEEEecCCCCceeeeEEEC
Confidence 999999999999987443 222333 33444443 4444432 23445555666554
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.25 E-value=9e-07 Score=87.33 Aligned_cols=150 Identities=9% Similarity=0.009 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
+..|.+.......+++.+|||||||+|.++..++...+ ...|+|+|+.-.+....... . ..+.++..+.+++ +
T Consensus 60 A~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~----~~g~~ii~~~~~~-d 132 (277)
T 3evf_A 60 TAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-Q----SLGWNIITFKDKT-D 132 (277)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-C----BTTGGGEEEECSC-C
T ss_pred HHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-C----cCCCCeEEEeccc-e
Confidence 34555555444456778999999999999998886543 45788888874431000000 0 0122445556654 2
Q ss_pred ccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHH--HHHHHHhhccccC-eEEEEEEcC---CC
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIK--EIVKNASKYLVKN-GLLLIEHGY---NQ 536 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~--~~l~~~~~~Lkpg-G~l~~~~~~---~~ 536 (570)
.......+||+|+||-... ... ...+.++ .+++.+.++|+|| |.|++-+-. ..
T Consensus 133 v~~l~~~~~DlVlsD~apn-sG~--------------------~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~ 191 (277)
T 3evf_A 133 IHRLEPVKCDTLLCDIGES-SSS--------------------SVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPD 191 (277)
T ss_dssp TTTSCCCCCSEEEECCCCC-CSC--------------------HHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHH
T ss_pred ehhcCCCCccEEEecCccC-cCc--------------------hHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCcc
Confidence 2223347899999983211 110 0011112 3478889999999 999985432 22
Q ss_pred HHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 537 SNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 537 ~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
...+...|+. -|..+.+.+. +.+.
T Consensus 192 ~~~l~~~lk~-~F~~V~~~KP-aSR~ 215 (277)
T 3evf_A 192 VLEKLELLQR-RFGGTVIRNP-LSRN 215 (277)
T ss_dssp HHHHHHHHHH-HHCCEEECCT-TSCT
T ss_pred HHHHHHHHHH-hcCCEEEEeC-CCCC
Confidence 2334444444 3777888776 5443
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.24 E-value=1.1e-06 Score=89.12 Aligned_cols=97 Identities=20% Similarity=0.323 Sum_probs=65.5
Q ss_pred CEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 452 PIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 452 ~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
++.++++|+++.+... +++||+||+||||............. .++..+.+.+..+..++.++.++|+|||.+++
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~-----~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i 95 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQL-----GHIEDYEAFLDELDRVWREVFRLLVPGGRLVI 95 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CC-----HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhh-----cccccHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 4789999998865432 37899999999998643221111111 11222333455677889999999999999999
Q ss_pred EEcCCC--------------HHHHHHHHHHCCCeeEE
Q psy2395 531 EHGYNQ--------------SNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 531 ~~~~~~--------------~~~l~~ll~~~Gf~~i~ 553 (570)
+++..+ ...+..++.+.||....
T Consensus 96 ~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 96 VVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EECCEEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred EECCCccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 987532 14677889999987644
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.23 E-value=6.3e-06 Score=82.55 Aligned_cols=128 Identities=12% Similarity=0.141 Sum_probs=92.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHHhh
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSK----NKIEIIATDISK--------------------------FALKIAKKNAKKK 445 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~----~~~~V~gvDis~--------------------------~al~~A~~n~~~~ 445 (570)
..+..|||+||..|..++.++...+ ++.+|+++|..+ ..++.+++|+...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3467999999999999998876542 257899999642 1467789999875
Q ss_pred cccCCCCEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhcccc
Q psy2395 446 LTKYNIPIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVK 524 (570)
Q Consensus 446 ~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkp 524 (570)
+. ...+++++.||+.+.++.. .++||+|+.+-- -.+.+...++.+...|+|
T Consensus 185 gl-~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---------------------------~y~~~~~~Le~~~p~L~p 236 (282)
T 2wk1_A 185 DL-LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---------------------------LYESTWDTLTNLYPKVSV 236 (282)
T ss_dssp TC-CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---------------------------SHHHHHHHHHHHGGGEEE
T ss_pred CC-CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---------------------------ccccHHHHHHHHHhhcCC
Confidence 31 1257999999998877644 368999999531 123456788999999999
Q ss_pred CeEEEEE-EcC--CCHHHHHHHHHHCCCee
Q psy2395 525 NGLLLIE-HGY--NQSNLVRKLLFKYGFSD 551 (570)
Q Consensus 525 gG~l~~~-~~~--~~~~~l~~ll~~~Gf~~ 551 (570)
||++++. +.. .....+.+++...|+..
T Consensus 237 GGiIv~DD~~~~~G~~~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 237 GGYVIVDDYMMCPPCKDAVDEYRAKFDIAD 266 (282)
T ss_dssp EEEEEESSCTTCHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhcCCce
Confidence 9998872 222 22456677777778654
No 299
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.18 E-value=8.8e-07 Score=87.52 Aligned_cols=149 Identities=7% Similarity=-0.058 Sum_probs=85.9
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
..|.+..-.....++.+|||||||.|.++..++...+ ...|+|+|+...+...+... . ..+.++.....++ +.
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~----~~g~~ii~~~~~~-dv 149 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-T----TLGWNLIRFKDKT-DV 149 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-C----BTTGGGEEEECSC-CG
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-c----cCCCceEEeeCCc-ch
Confidence 4455555444556778999999999999999886543 46799999986532222110 0 0122333333322 11
Q ss_pred cccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHH--HHHHHHhhccccC--eEEEEEEcC---CC
Q psy2395 464 LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIK--EIVKNASKYLVKN--GLLLIEHGY---NQ 536 (570)
Q Consensus 464 l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~--~~l~~~~~~Lkpg--G~l~~~~~~---~~ 536 (570)
......++|+|+||.... ... ...+.++ .++..+..+|+|| |.|++-+=. ..
T Consensus 150 ~~l~~~~~DvVLSDmApn-sG~--------------------~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~ 208 (282)
T 3gcz_A 150 FNMEVIPGDTLLCDIGES-SPS--------------------IAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPL 208 (282)
T ss_dssp GGSCCCCCSEEEECCCCC-CSC--------------------HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHH
T ss_pred hhcCCCCcCEEEecCccC-CCC--------------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCcc
Confidence 122247899999983211 110 0112222 3588888999999 999885432 22
Q ss_pred HHHHHHHHHHCCCeeEEEEecCCCCc
Q psy2395 537 SNLVRKLLFKYGFSDIKSWRDLSGIE 562 (570)
Q Consensus 537 ~~~l~~ll~~~Gf~~i~~~~D~~g~~ 562 (570)
...+...|+. -|..+.+.+. +.+.
T Consensus 209 ~~~l~~~lk~-~F~~V~~~KP-aSR~ 232 (282)
T 3gcz_A 209 IMEELSRLQL-KHGGGLVRVP-LSRN 232 (282)
T ss_dssp HHHHHHHHHH-HHCCEEECCT-TSCT
T ss_pred HHHHHHHHHH-hcCCEEEEcC-CCcc
Confidence 2334444444 3777877776 5443
No 300
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.13 E-value=7e-06 Score=81.51 Aligned_cols=78 Identities=15% Similarity=0.062 Sum_probs=62.7
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc---cccC-CCc
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN---LQNY-KKL 470 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~---l~~~-~~~ 470 (570)
..++..++|.+||.|..+..+++. +++|+|+|.||.+++.|++ +. . .+++++++|+.+. +... .++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~-----~-~rv~lv~~~f~~l~~~L~~~g~~~ 89 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LH-----L-PGLTVVQGNFRHLKRHLAALGVER 89 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TC-----C-TTEEEEESCGGGHHHHHHHTTCSC
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hc-----c-CCEEEEECCcchHHHHHHHcCCCC
Confidence 356789999999999999999976 3699999999999999998 54 2 4799999999653 2211 157
Q ss_pred eeEEEECCCCCC
Q psy2395 471 FNIIVANPPYIP 482 (570)
Q Consensus 471 fD~Iv~NPPy~~ 482 (570)
||.|++|++|..
T Consensus 90 vDgIL~DLGvSS 101 (285)
T 1wg8_A 90 VDGILADLGVSS 101 (285)
T ss_dssp EEEEEEECSCCH
T ss_pred cCEEEeCCcccc
Confidence 999999887543
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.97 E-value=9.4e-05 Score=73.02 Aligned_cols=126 Identities=10% Similarity=0.137 Sum_probs=80.0
Q ss_pred CCCCEEEEECC------cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCC
Q psy2395 396 EKKIKLLEMGT------GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKK 469 (570)
Q Consensus 396 ~~~~~VLDlGc------GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 469 (570)
+.+.+|||+|+ -.|. ..+.+..+.++.|+++|+.|-.. ... .+++||+.+... ..
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------------da~-~~IqGD~~~~~~--~~ 168 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------------DAD-STLIGDCATVHT--AN 168 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------------SSS-EEEESCGGGEEE--SS
T ss_pred cCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------------CCC-eEEEcccccccc--CC
Confidence 56889999997 4566 34445555446999999987431 112 459999865333 37
Q ss_pred ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE--cCCCHHHHHHHHHHC
Q psy2395 470 LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH--GYNQSNLVRKLLFKY 547 (570)
Q Consensus 470 ~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~--~~~~~~~l~~ll~~~ 547 (570)
+||+|+|+.-=-...... . + ......+.+.++.-+.+.|+|||.|++-+ |.+ .+.+.++. +
T Consensus 169 k~DLVISDMAPNtTG~~D--~------d------~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg-~~~L~~lr-k- 231 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVT--K------E------NDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW-NADLYKLM-G- 231 (344)
T ss_dssp CEEEEEECCCCTTSCSSC--S------C------CCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC-CHHHHHHH-T-
T ss_pred CCCEEEecCCCCcCCccc--c------c------hhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC-HHHHHHHH-h-
Confidence 899999983110111000 0 0 00123356788888999999999999854 333 34455544 3
Q ss_pred CCeeEEEEec
Q psy2395 548 GFSDIKSWRD 557 (570)
Q Consensus 548 Gf~~i~~~~D 557 (570)
-|..+++++.
T Consensus 232 ~F~~VK~fK~ 241 (344)
T 3r24_A 232 HFSWWTAFVT 241 (344)
T ss_dssp TEEEEEEEEE
T ss_pred hCCeEEEECC
Confidence 6998888874
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.93 E-value=3.7e-05 Score=79.32 Aligned_cols=147 Identities=18% Similarity=0.212 Sum_probs=86.4
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc-CC-CceeEEE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-YK-KLFNIIV 475 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-~~-~~fD~Iv 475 (570)
+.+|+|++||+|.+++.+...+-....|+++|+++.+++..+.|... ..++++|+.+.... .. ..+|+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~--------~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH--------TQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc--------cccccCCHHHccHhHcCcCCcCEEE
Confidence 35899999999999999987752113699999999999999999752 34778998664321 11 2699999
Q ss_pred ECCCCCCCCCcccCCCCccccccccccccCCCh-HHHHHHHHHHhhccc--cCeEEEEE-EcC----CCHHHHHHHHHHC
Q psy2395 476 ANPPYIPKGDIHLNKGDLRFEPINALTDYSNGL-SSIKEIVKNASKYLV--KNGLLLIE-HGY----NQSNLVRKLLFKY 547 (570)
Q Consensus 476 ~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl-~~~~~~l~~~~~~Lk--pgG~l~~~-~~~----~~~~~l~~ll~~~ 547 (570)
.+||.-+.+.... .. +..+.. ..+..+++. .+.++ |. ++++| +.. .....+.+.|.+.
T Consensus 74 ~gpPCq~fS~ag~---~~---------g~~d~r~~l~~~~~~~-i~~~~~~P~-~~~~ENV~~l~~~~~~~~i~~~l~~~ 139 (343)
T 1g55_A 74 MSPPCQPFTRIGR---QG---------DMTDSRTNSFLHILDI-LPRLQKLPK-YILLENVKGFEVSSTRDLLIQTIENC 139 (343)
T ss_dssp ECCC------------------------------CHHHHHHHH-GGGCSSCCS-EEEEEEETTGGGSHHHHHHHHHHHHT
T ss_pred EcCCCcchhhcCC---cC---------CccCccchHHHHHHHH-HHHhcCCCC-EEEEeCCccccCHHHHHHHHHHHHHC
Confidence 9999654321100 00 000100 133445543 34556 65 44453 222 2245677778889
Q ss_pred CCeeEEEEe---cC---CCCceEEE
Q psy2395 548 GFSDIKSWR---DL---SGIERVTQ 566 (570)
Q Consensus 548 Gf~~i~~~~---D~---~g~~R~~~ 566 (570)
||......- |+ +.+.|+++
T Consensus 140 GY~v~~~vl~a~~~GvPQ~R~R~~i 164 (343)
T 1g55_A 140 GFQYQEFLLSPTSLGIPNSRLRYFL 164 (343)
T ss_dssp TEEEEEEEECGGGGTCSCCCCEEEE
T ss_pred CCeeEEEEEEHHHCCCCCcccEEEE
Confidence 997644322 22 45667655
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.87 E-value=3.1e-05 Score=78.24 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
..+++.++.....++..|||+|||||.+++++++.+ .+++|+|+++.+++.|++|+..
T Consensus 222 ~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 222 LELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHH
Confidence 344555555444678899999999999999988764 5899999999999999999876
No 304
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.81 E-value=1.7e-05 Score=77.25 Aligned_cols=143 Identities=11% Similarity=0.084 Sum_probs=80.4
Q ss_pred hhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCC---CcEEEEEeC--CHHHHHHHHHHHHhhcccCCCC-EE
Q psy2395 381 PETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKN---KIEIIATDI--SKFALKIAKKNAKKKLTKYNIP-IK 454 (570)
Q Consensus 381 ~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~---~~~V~gvDi--s~~al~~A~~n~~~~~~~~~~~-v~ 454 (570)
..+..|.+.--..+.+++.+|+||||+.|.++..++....- ...++|+|+ .|-.. . ..+.+ +.
T Consensus 57 RAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~----~~Gv~~i~ 125 (269)
T 2px2_A 57 RGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------Q----SYGWNIVT 125 (269)
T ss_dssp THHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------C----STTGGGEE
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------c----CCCceEEE
Confidence 34455555555556678999999999999999999876210 123445552 11100 0 01112 45
Q ss_pred EEEc-ccccccccCCCceeEEEECC-CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCe-EEEEE
Q psy2395 455 FIKS-NWYNNLQNYKKLFNIIVANP-PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNG-LLLIE 531 (570)
Q Consensus 455 ~~~~-D~~~~l~~~~~~fD~Iv~NP-Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG-~l~~~ 531 (570)
|.++ |+++ +. ..++|+|+|+. |- .... . .|....+. .+..+.++|+||| .|++-
T Consensus 126 ~~~G~Df~~-~~--~~~~DvVLSDMAPn--SG~~-----~------------vD~~Rs~~-aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 126 MKSGVDVFY-KP--SEISDTLLCDIGES--SPSA-----E------------IEEQRTLR-ILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp EECSCCGGG-SC--CCCCSEEEECCCCC--CSCH-----H------------HHHHHHHH-HHHHHHHHHTTCCSEEEEE
T ss_pred eeccCCccC-CC--CCCCCEEEeCCCCC--CCcc-----H------------HHHHHHHH-HHHHHHHHhhcCCcEEEEE
Confidence 6667 9976 22 25899999983 21 1100 0 01111222 6777888999999 88774
Q ss_pred EcCCCHHHHHHHHHH--CCCeeEEEEec
Q psy2395 532 HGYNQSNLVRKLLFK--YGFSDIKSWRD 557 (570)
Q Consensus 532 ~~~~~~~~l~~ll~~--~Gf~~i~~~~D 557 (570)
+-....+.+.++++. .-|..+.+.+.
T Consensus 183 VFqg~~~~~~~~l~~lk~~F~~vkvk~p 210 (269)
T 2px2_A 183 ILCPYMPKVIEKLESLQRRFGGGLVRVP 210 (269)
T ss_dssp ESCTTSHHHHHHHHHHHHHHCCEEECCT
T ss_pred ECCCCchHHHHHHHHHHHHcCCEEEECC
Confidence 433333445443332 13666666555
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.79 E-value=0.00037 Score=70.18 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=90.5
Q ss_pred CCCEEEEECCcccHHHHHHHH----hcCC-CcEEEEEeCCH--------H-HHHHHHHHHHhh--cccCCCCEEEEEccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAI----YSKN-KIEIIATDISK--------F-ALKIAKKNAKKK--LTKYNIPIKFIKSNW 460 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~----~~~~-~~~V~gvDis~--------~-al~~A~~n~~~~--~~~~~~~v~~~~~D~ 460 (570)
+..+|||+|-|||...+.... ..+. ..+++++|..+ . .-+....-.... .......+++..||+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 446899999999987654332 2221 24567777533 1 111222222111 001123467889999
Q ss_pred ccccccCC-CceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcCCCHHH
Q psy2395 461 YNNLQNYK-KLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNL 539 (570)
Q Consensus 461 ~~~l~~~~-~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 539 (570)
.+.++... .+||+|+.|+ |.|...+ .+ + -..+++.++++++|||.++ .+.....
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNP-----------eL--------W--s~e~f~~l~~~~~pgg~la---TYtaag~ 230 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNP-----------EL--------W--TLDFLSLIKERIDEKGYWV---SYSSSLS 230 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSG-----------GG--------G--SHHHHHHHHTTEEEEEEEE---ESCCCHH
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCc-----------cc--------C--CHHHHHHHHHHhCCCcEEE---EEeCcHH
Confidence 88776544 4799999986 4443321 10 1 1678999999999999886 3566778
Q ss_pred HHHHHHHCCCeeEEEEecCCCCceEEEEEe
Q psy2395 540 VRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569 (570)
Q Consensus 540 l~~ll~~~Gf~~i~~~~D~~g~~R~~~~~~ 569 (570)
+++.|.++||.+- ..+-..++.-+++|.+
T Consensus 231 VRR~L~~aGF~V~-k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 231 VRKSLLTLGFKVG-SSREIGRKRKGTVASL 259 (308)
T ss_dssp HHHHHHHTTCEEE-EEECC---CEEEEEES
T ss_pred HHHHHHHCCCEEE-ecCCCCCCCceeEEec
Confidence 9999999999854 4555566666777765
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.78 E-value=2.2e-05 Score=78.03 Aligned_cols=146 Identities=9% Similarity=-0.001 Sum_probs=82.1
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCC-EEEEEc-ccc
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIP-IKFIKS-NWY 461 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~-v~~~~~-D~~ 461 (570)
..|.+..-..+..++.+||||||++|.++..+++..+ ...|+|+|+...+....... . ..+.+ +.+..+ |+.
T Consensus 68 ~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~~-~----~~~~~iv~~~~~~di~ 141 (300)
T 3eld_A 68 AKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIHM-Q----TLGWNIVKFKDKSNVF 141 (300)
T ss_dssp HHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-C----BTTGGGEEEECSCCTT
T ss_pred HHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEeccccccccccc-c----ccCCceEEeecCceee
Confidence 3444444333446788999999999999999997543 45799999975421100000 0 01112 233322 332
Q ss_pred cccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHH--HHHHHHHhhccccC-eEEEEEEcC---C
Q psy2395 462 NNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSI--KEIVKNASKYLVKN-GLLLIEHGY---N 535 (570)
Q Consensus 462 ~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~--~~~l~~~~~~Lkpg-G~l~~~~~~---~ 535 (570)
. ....++|+|+||---. ... ...+.+ ..++..+..+|+|| |.|++-+-. .
T Consensus 142 ~---l~~~~~DlVlsD~APn-sG~--------------------~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~ 197 (300)
T 3eld_A 142 T---MPTEPSDTLLCDIGES-SSN--------------------PLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHP 197 (300)
T ss_dssp T---SCCCCCSEEEECCCCC-CSS--------------------HHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSH
T ss_pred e---cCCCCcCEEeecCcCC-CCC--------------------HHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCc
Confidence 2 2236899999983111 110 001111 24488888999999 999885422 1
Q ss_pred CHHHHHHHHHHCCCeeEEEEecCCCC
Q psy2395 536 QSNLVRKLLFKYGFSDIKSWRDLSGI 561 (570)
Q Consensus 536 ~~~~l~~ll~~~Gf~~i~~~~D~~g~ 561 (570)
....+...|+. -|..+.+.+. +.+
T Consensus 198 ~~~~ll~~lk~-~F~~V~~~KP-aSR 221 (300)
T 3eld_A 198 DVIEKLERLQL-RFGGGIVRVP-FSR 221 (300)
T ss_dssp HHHHHHHHHHH-HHCCEEECCT-TSC
T ss_pred cHHHHHHHHHH-hCCcEEEEeC-CCC
Confidence 22334444444 3777777776 443
No 307
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.73 E-value=0.001 Score=68.64 Aligned_cols=86 Identities=9% Similarity=0.133 Sum_probs=61.5
Q ss_pred cchhHHHHHHHHHhh--------cCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC
Q psy2395 379 PRPETELLVDLIVKK--------TFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYN 450 (570)
Q Consensus 379 pr~~t~~l~~~~~~~--------~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~ 450 (570)
|...+..|.+.+... ...++.++||+||++|.++..+++++ ++|+|||+.+-.- .+. ..
T Consensus 185 pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~l~~-----~l~-----~~ 251 (375)
T 4auk_A 185 PSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGPMAQ-----SLM-----DT 251 (375)
T ss_dssp SCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSCCCH-----HHH-----TT
T ss_pred CCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhhcCh-----hhc-----cC
Confidence 444555665554332 23578999999999999999999764 6999999865221 111 23
Q ss_pred CCEEEEEcccccccccCCCceeEEEECC
Q psy2395 451 IPIKFIKSNWYNNLQNYKKLFNIIVANP 478 (570)
Q Consensus 451 ~~v~~~~~D~~~~l~~~~~~fD~Iv~NP 478 (570)
.+|+++++|++...+. ..+||+|+|+.
T Consensus 252 ~~V~~~~~d~~~~~~~-~~~~D~vvsDm 278 (375)
T 4auk_A 252 GQVTWLREDGFKFRPT-RSNISWMVCDM 278 (375)
T ss_dssp TCEEEECSCTTTCCCC-SSCEEEEEECC
T ss_pred CCeEEEeCccccccCC-CCCcCEEEEcC
Confidence 4699999999875543 46899999974
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.65 E-value=0.00091 Score=68.39 Aligned_cols=143 Identities=12% Similarity=0.131 Sum_probs=88.8
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEEC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~N 477 (570)
+.+++|++||+|.+++.+...+ ...|+++|+++.+++..+.|... . . ++|+.+.....-..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~----~---~---~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGE----K---P---EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSC----C---C---BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCC----C---C---cCCHHHcCHhhCCCCCEEEEC
Confidence 4689999999999999998765 35688999999999999999753 1 1 688866443222469999999
Q ss_pred CCCCCCCCcccCCCCccc-cccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cC-C------CHHHHHHHHHHCC
Q psy2395 478 PPYIPKGDIHLNKGDLRF-EPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GY-N------QSNLVRKLLFKYG 548 (570)
Q Consensus 478 PPy~~~~~~~~~~~~~~~-ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~-~------~~~~l~~ll~~~G 548 (570)
||+-+.+.... ...+ +|+. ..+..+++.+ +.++|. ++++|- +. . ....+.+.|.+.|
T Consensus 79 pPCQ~fS~ag~---~~g~~d~r~---------~L~~~~~r~i-~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G 144 (327)
T 2c7p_A 79 FPCQAFSISGK---QKGFEDSRG---------TLFFDIARIV-REKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELD 144 (327)
T ss_dssp CCCTTTCTTSC---CCGGGSTTS---------CHHHHHHHHH-HHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTT
T ss_pred CCCCCcchhcc---cCCCcchhh---------HHHHHHHHHH-HhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCC
Confidence 99875442110 0000 1111 1334444433 346785 455543 21 1 1345677788899
Q ss_pred CeeEEEEe---cC---CCCceEEE
Q psy2395 549 FSDIKSWR---DL---SGIERVTQ 566 (570)
Q Consensus 549 f~~i~~~~---D~---~g~~R~~~ 566 (570)
|......- |+ +.+.|+++
T Consensus 145 Y~v~~~vl~a~~~GvPQ~R~R~~i 168 (327)
T 2c7p_A 145 YSFHAKVLNALDYGIPQKRERIYM 168 (327)
T ss_dssp BCCEEEEEEGGGGTCSBCCEEEEE
T ss_pred CEEEEEEEEHHHcCCCccceEEEE
Confidence 87643322 22 44557654
No 309
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.63 E-value=5.1e-05 Score=77.05 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=62.5
Q ss_pred CCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc---ccC--CC
Q psy2395 395 FEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL---QNY--KK 469 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l---~~~--~~ 469 (570)
..++..++|.+||.|..+..++....+..+|+|+|.++.|++.|+ ++ ...+++++++++.+.. ... .+
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL------~~~Rv~lv~~nF~~l~~~L~~~g~~~ 127 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI------DDPRFSIIHGPFSALGEYVAERDLIG 127 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC------CCTTEEEEESCGGGHHHHHHHTTCTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh------cCCcEEEEeCCHHHHHHHHHhcCCCC
Confidence 357889999999999999999987645689999999999999984 32 2457999999986532 211 13
Q ss_pred ceeEEEECCCCC
Q psy2395 470 LFNIIVANPPYI 481 (570)
Q Consensus 470 ~fD~Iv~NPPy~ 481 (570)
++|.|+.|..|.
T Consensus 128 ~vDgILfDLGVS 139 (347)
T 3tka_A 128 KIDGILLDLGVS 139 (347)
T ss_dssp CEEEEEEECSCC
T ss_pred cccEEEECCccC
Confidence 699999976654
No 310
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.55 E-value=0.0012 Score=63.28 Aligned_cols=121 Identities=10% Similarity=0.099 Sum_probs=73.6
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC-CCEEEEEc-cc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYN-IPIKFIKS-NW 460 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~-~~v~~~~~-D~ 460 (570)
+..|.+.....+..++.+|+|+||++|.++..++.... ..+|+|+|+-+.--+.=+ ..+. .+ ..++|..+ |+
T Consensus 64 ~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~-~~~s----~gwn~v~fk~gvDv 137 (267)
T 3p8z_A 64 SAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPV-PMST----YGWNIVKLMSGKDV 137 (267)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCC-CCCC----TTTTSEEEECSCCG
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcc-hhhh----cCcCceEEEeccce
Confidence 34555555555556788999999999999998887653 468999999654210000 0000 11 23899999 98
Q ss_pred ccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 461 YNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 461 ~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
+...+ .++|.|+|+.-=. .+.. .+ +.... ...++.+.+.|++ |.+++-+
T Consensus 138 ~~~~~---~~~DtllcDIgeS-s~~~-----~v------------E~~Rt-lrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 138 FYLPP---EKCDTLLCDIGES-SPSP-----TV------------EESRT-IRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp GGCCC---CCCSEEEECCCCC-CSCH-----HH------------HHHHH-HHHHHHHGGGCSS-CEEEEEE
T ss_pred eecCC---ccccEEEEecCCC-CCCh-----hh------------hhhHH-HHHHHHHHHhccc-CCEEEEE
Confidence 54332 5799999973111 1100 00 00011 2378888899998 6777644
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.53 E-value=0.00013 Score=72.21 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=47.9
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
..|++.++.....++..|||++||||..++++++.+ .+++|+|+++.+++.|++|+..
T Consensus 199 ~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~g---r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 199 RDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLG---RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHh
Confidence 345555555445678899999999999999988764 5899999999999999999975
No 312
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.50 E-value=0.001 Score=69.37 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=57.7
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc-------CCCce
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------YKKLF 471 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------~~~~f 471 (570)
.+++|++||+|.+++.+...+ ...|.++|+++.+++..+.|.. ...++++|+.+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~--------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP--------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT--------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC--------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 589999999999999998776 2467899999999999888864 256788998664221 13579
Q ss_pred eEEEECCCCC
Q psy2395 472 NIIVANPPYI 481 (570)
Q Consensus 472 D~Iv~NPPy~ 481 (570)
|+|+..||--
T Consensus 73 D~i~ggpPCQ 82 (376)
T 3g7u_A 73 DGIIGGPPCQ 82 (376)
T ss_dssp CEEEECCCCC
T ss_pred eEEEecCCCC
Confidence 9999999954
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.43 E-value=0.00038 Score=71.14 Aligned_cols=91 Identities=11% Similarity=0.232 Sum_probs=62.2
Q ss_pred CEEEEEcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 452 PIKFIKSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 452 ~v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+..++++|..+.+... +++||+|++||||...... .|.. ....+-+..+..++..+.++|+|||.+++
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~-------~y~~----~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKK-------EYGN----LEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSC-------SSCS----CHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCccc-------ccCC----cCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 5789999997765432 4789999999999754311 1110 00111234677889999999999999999
Q ss_pred EEcCC-----------CHHHHHHHHHHCCCeeEE
Q psy2395 531 EHGYN-----------QSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 531 ~~~~~-----------~~~~l~~ll~~~Gf~~i~ 553 (570)
.++.. ....+..++...||..+.
T Consensus 83 ~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 83 DFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EECCCEETTEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred EECCEecCCCcccccchHHHHHHHHHhCCCEEEE
Confidence 88765 133455667889987643
No 314
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.41 E-value=0.0012 Score=65.28 Aligned_cols=135 Identities=10% Similarity=0.102 Sum_probs=77.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCC-CCEEEEEc-cc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYN-IPIKFIKS-NW 460 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~-~~v~~~~~-D~ 460 (570)
+..|.+........++.+||||||++|.++..++.... ...|+|+|+-..--+.=+ ..+. ++ .-|.|..+ |+
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~-~~~q----l~w~lV~~~~~~Dv 153 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQ-LVQS----YGWNIVTMKSGVDV 153 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCC-CCCB----TTGGGEEEECSCCT
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcc-hhhh----cCCcceEEEeccCH
Confidence 34555555444556778999999999999998876643 457999999765110000 0000 11 12888888 87
Q ss_pred ccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccC-eEEEEEEcCCCHHH
Q psy2395 461 YNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKN-GLLLIEHGYNQSNL 539 (570)
Q Consensus 461 ~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~~~~ 539 (570)
.. ++. .++|+|+|+-- -..+.. .+ +.... ...++.+.+.|++| |-|++-+-....+.
T Consensus 154 ~~-l~~--~~~D~ivcDig-eSs~~~-----~v------------e~~Rt-l~vLel~~~wL~~~~~~f~~KVl~pY~~~ 211 (321)
T 3lkz_A 154 FY-RPS--ECCDTLLCDIG-ESSSSA-----EV------------EEHRT-IRVLEMVEDWLHRGPREFCVKVLCPYMPK 211 (321)
T ss_dssp TS-SCC--CCCSEEEECCC-CCCSCH-----HH------------HHHHH-HHHHHHHHHHHTTCCCEEEEEESCTTSHH
T ss_pred hh-CCC--CCCCEEEEECc-cCCCCh-----hh------------hhhHH-HHHHHHHHHHhccCCCcEEEEEcCCCChH
Confidence 44 332 57999999753 111100 00 00011 23777778889988 88877443333333
Q ss_pred HHHHHH
Q psy2395 540 VRKLLF 545 (570)
Q Consensus 540 l~~ll~ 545 (570)
+.+.+.
T Consensus 212 v~e~l~ 217 (321)
T 3lkz_A 212 VIEKME 217 (321)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 434443
No 315
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.36 E-value=0.0024 Score=66.44 Aligned_cols=130 Identities=11% Similarity=0.025 Sum_probs=71.3
Q ss_pred CCEEEEECCcccHHHHHHHHh----------------cCCCcEEEEEeCC-----------HHHHHHHHHHHHhhcccCC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIY----------------SKNKIEIIATDIS-----------KFALKIAKKNAKKKLTKYN 450 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~----------------~~~~~~V~gvDis-----------~~al~~A~~n~~~~~~~~~ 450 (570)
..+|+|+|||+|..++.+... -++..+|+..|+- |...+.+++. .+ ..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g--~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NG--RK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TC--CC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---cc--CC
Confidence 578999999999998887654 0235789999987 4444332221 11 11
Q ss_pred CCEEEEEcccccc--cccCCCceeEEEECCCCCCCCCcc-cCCCC--ccc-cccccccccCCC-----------hHHHHH
Q psy2395 451 IPIKFIKSNWYNN--LQNYKKLFNIIVANPPYIPKGDIH-LNKGD--LRF-EPINALTDYSNG-----------LSSIKE 513 (570)
Q Consensus 451 ~~v~~~~~D~~~~--l~~~~~~fD~Iv~NPPy~~~~~~~-~~~~~--~~~-ep~~al~~~~~g-----------l~~~~~ 513 (570)
.+..|+.|..-.. ...+.++||+|++|-..+.-.... ..... ..+ .-.. ....... ...+..
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i-~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCI-YSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCS-SSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCce-EecCCCCHHHHHHHHHHHHHHHHH
Confidence 2335555543221 223458999999986655433221 10000 000 0000 0000000 012445
Q ss_pred HHHHHhhccccCeEEEEEEc
Q psy2395 514 IVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 514 ~l~~~~~~LkpgG~l~~~~~ 533 (570)
|++...+.|+|||.+++.++
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEEe
Confidence 78888999999999999764
No 316
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.34 E-value=0.0006 Score=70.28 Aligned_cols=59 Identities=14% Similarity=0.155 Sum_probs=48.9
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
+..|||||.|.|.++..|+.... ..+|+++|+++..+...+... . ..+++++.+|+++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T-----TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEECCccch
Confidence 57999999999999999997642 358999999999998887765 2 24699999999653
No 317
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.33 E-value=0.00023 Score=70.28 Aligned_cols=89 Identities=20% Similarity=0.218 Sum_probs=60.5
Q ss_pred EEEEEcccccccccC-CCceeEEEECCCCCCC-CCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 453 IKFIKSNWYNNLQNY-KKLFNIIVANPPYIPK-GDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 453 v~~~~~D~~~~l~~~-~~~fD~Iv~NPPy~~~-~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
..++++|+++.+... +++||+|+++|||... ..... + ....+-+.++..++..+.++|+|+|.+++
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~------~------~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v 72 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDS------F------DSHNEFLAFTYRWIDKVLDKLDKDGSLYI 72 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGC------C------SSHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccc------c------CCHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 357899987765432 3689999999999753 11100 0 01111234667888889999999999999
Q ss_pred EEcCCCHHHHHHHHHHCCCeeEE
Q psy2395 531 EHGYNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 531 ~~~~~~~~~l~~ll~~~Gf~~i~ 553 (570)
.+.......+..++.+.||....
T Consensus 73 ~~~d~~~~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 73 FNTPFNCAFICQYLVSKGMIFQN 95 (260)
T ss_dssp EECHHHHHHHHHHHHHTTCEEEE
T ss_pred EcCcHHHHHHHHHHHhhccceeE
Confidence 87655556667778888986543
No 318
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.20 E-value=0.0026 Score=66.08 Aligned_cols=134 Identities=7% Similarity=0.055 Sum_probs=69.8
Q ss_pred CCEEEEECCcccHHHHHHH--------Hhc------CCCcEEEEEeCCHHHHHHHHHHHHhhcc---------cCCCC--
Q psy2395 398 KIKLLEMGTGSGAIAIAIA--------IYS------KNKIEIIATDISKFALKIAKKNAKKKLT---------KYNIP-- 452 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la--------~~~------~~~~~V~gvDis~~al~~A~~n~~~~~~---------~~~~~-- 452 (570)
+.+|+|+|||+|..++.++ +.+ ++..+|+..|+-.......=+.+..... ....+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999988873 121 2357899999866554333222221100 00001
Q ss_pred -EEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccc-----cccccccC-CC--------hHHHHHHHHH
Q psy2395 453 -IKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEP-----INALTDYS-NG--------LSSIKEIVKN 517 (570)
Q Consensus 453 -v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep-----~~al~~~~-~g--------l~~~~~~l~~ 517 (570)
+.-+-+.+..- ..++++||+|+||-..+.-......-.+. ..| +.-..... .- ...+..+++.
T Consensus 133 f~~gvpgSFy~r-lfP~~S~d~v~Ss~aLHWls~~p~~l~~~-~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 133 FVAGVPGSFYRR-LFPARTIDFFHSAFSLHWLSQVPESVTDR-RSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp EEEEEESCTTSC-CSCTTCEEEEEEESCTTBCSSCCGGGGCT-TSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcc-cCCCcceEEEEecceeeeeccCchhhhcc-ccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333322 23458999999986655432211000000 000 00000000 00 0234567888
Q ss_pred HhhccccCeEEEEEEc
Q psy2395 518 ASKYLVKNGLLLIEHG 533 (570)
Q Consensus 518 ~~~~LkpgG~l~~~~~ 533 (570)
.++.|+|||.+++.+.
T Consensus 211 ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEEe
Confidence 8999999999998663
No 319
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.10 E-value=0.0031 Score=64.37 Aligned_cols=148 Identities=20% Similarity=0.161 Sum_probs=88.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEE-EEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--CCCceeE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEI-IATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--YKKLFNI 473 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V-~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~ 473 (570)
...+++|++||.|.+++.+...+-....| .++|+++.+++.-+.|... . ++++|+.+.... ....+|+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~----~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E----VQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C----CBCCCTTTCCHHHHHHTCCCE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C----cccCChhhcCHHHhccCCCCE
Confidence 45689999999999999998765211356 7999999999999999752 1 567888653221 0126999
Q ss_pred EEECCCCCCC--CCcccCCCCccccccccccccCCCh-HHHHHHHHHHhhcc--ccCeEEEEEEcC-----CCHHHHHHH
Q psy2395 474 IVANPPYIPK--GDIHLNKGDLRFEPINALTDYSNGL-SSIKEIVKNASKYL--VKNGLLLIEHGY-----NQSNLVRKL 543 (570)
Q Consensus 474 Iv~NPPy~~~--~~~~~~~~~~~~ep~~al~~~~~gl-~~~~~~l~~~~~~L--kpgG~l~~~~~~-----~~~~~l~~l 543 (570)
++..||--+. .... ... +..+.- ..+..+++.+.+.+ +|. ++++|--. .....+.+.
T Consensus 80 l~ggpPCQ~fs~S~ag---~~~---------~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~~~~~~~i~~~ 146 (327)
T 3qv2_A 80 WFMSPPCQPYNNSIMS---KHK---------DINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFKESLVFKEIYNI 146 (327)
T ss_dssp EEECCCCTTCSHHHHT---TTC---------TTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGGSHHHHHHHHH
T ss_pred EEecCCccCcccccCC---CCC---------CCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhcChHHHHHHHHH
Confidence 9999995433 1100 000 001111 23344444233445 554 45555321 124567778
Q ss_pred HHHCCCeeEEEEec---C---CCCceEEE
Q psy2395 544 LFKYGFSDIKSWRD---L---SGIERVTQ 566 (570)
Q Consensus 544 l~~~Gf~~i~~~~D---~---~g~~R~~~ 566 (570)
|.+.||..-...-+ + +.+.|+++
T Consensus 147 l~~~GY~v~~~vl~a~~yGvPQ~R~R~fi 175 (327)
T 3qv2_A 147 LIKNQYYIKDIICSPIDIGIPNSRTRYYV 175 (327)
T ss_dssp HHHTTCEEEEEEECGGGGTCSBCCCEEEE
T ss_pred HHhCCCEEEEEEEeHHHcCCCccceEEEE
Confidence 88999986443322 2 44667764
No 320
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.99 E-value=0.002 Score=65.93 Aligned_cols=147 Identities=20% Similarity=0.126 Sum_probs=88.6
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--CCCceeEEEE
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--YKKLFNIIVA 476 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~Iv~ 476 (570)
.+++|++||.|.+++.+...+.....|.++|+++.+++.-+.|... ..++.+|+.+.... ....+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~--------~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE--------TNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC--------CceeccccccCCHHHhccCCCCEEEe
Confidence 4899999999999999987653113578999999999998888652 34677888653221 1136999999
Q ss_pred CCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccc-cCeEEEEEEcCC-----CHHHHHHHHHHCCCe
Q psy2395 477 NPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLV-KNGLLLIEHGYN-----QSNLVRKLLFKYGFS 550 (570)
Q Consensus 477 NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~Lk-pgG~l~~~~~~~-----~~~~l~~ll~~~Gf~ 550 (570)
.||--+.+...... . ..+++. ..+..+++.+ +.++ |. ++++|--.. ....+.+.|.+.||.
T Consensus 76 gpPCQ~fS~ag~~~-~-~~d~r~---------~L~~~~~r~i-~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~ 142 (333)
T 4h0n_A 76 SPPCQPFTRNGKYL-D-DNDPRT---------NSFLYLIGIL-DQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFI 142 (333)
T ss_dssp CCCCCCSEETTEEC-C-TTCTTS---------CCHHHHHHHG-GGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEE
T ss_pred cCCCcchhhhhhcc-C-CcCccc---------ccHHHHHHHH-HHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCe
Confidence 99954432110000 0 001111 1234444433 3454 64 455554221 246778888899998
Q ss_pred eEEEEecC------CCCceEEE
Q psy2395 551 DIKSWRDL------SGIERVTQ 566 (570)
Q Consensus 551 ~i~~~~D~------~g~~R~~~ 566 (570)
.-...-+. +.+.|+++
T Consensus 143 v~~~vl~a~~~GvPQ~R~R~fi 164 (333)
T 4h0n_A 143 YQEFLLCPSTVGVPNSRLRYYC 164 (333)
T ss_dssp EEEEEECTTTTTCSCCCCEEEE
T ss_pred EEEEEecHHHcCCCccceEEEE
Confidence 75444332 44567654
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.99 E-value=0.0014 Score=66.80 Aligned_cols=87 Identities=14% Similarity=0.144 Sum_probs=59.9
Q ss_pred CEEEE-EcccccccccC-CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 452 PIKFI-KSNWYNNLQNY-KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 452 ~v~~~-~~D~~~~l~~~-~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
...++ ++|+++.+... +++||+|+++|||....+. + ....+-+..+...+..+.++|+|||.++
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~--------~------~~~~~~~~~~~~~l~~~~rvLk~~G~i~ 103 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLAD--------W------DDHMDYIGWAKRWLAEAERVLSPTGSIA 103 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGG--------G------GTCSSHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCC--------c------cCHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 36778 99998765433 3689999999999743110 0 0011224567788888999999999999
Q ss_pred EEEcCCCH--------HHHHHHHHHCC-CeeE
Q psy2395 530 IEHGYNQS--------NLVRKLLFKYG-FSDI 552 (570)
Q Consensus 530 ~~~~~~~~--------~~l~~ll~~~G-f~~i 552 (570)
+.++.... ..+...+...| |..+
T Consensus 104 i~~~~~~~~~~~~~~l~~l~~~i~~~G~~~~~ 135 (319)
T 1eg2_A 104 IFGGLQYQGEAGSGDLISIISHMRQNSKMLLA 135 (319)
T ss_dssp EEECSCCCCCTTBCCHHHHHHHHHHHCCCEEE
T ss_pred EEcCcccccccccccHHHHHHHHhCcccceeE
Confidence 98876544 56666666667 7653
No 322
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.78 E-value=0.0075 Score=67.86 Aligned_cols=132 Identities=11% Similarity=0.109 Sum_probs=85.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-------C----CCcEEEEEeCCHHHHHHHHHH--------------HHhh-----c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-------K----NKIEIIATDISKFALKIAKKN--------------AKKK-----L 446 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-------~----~~~~V~gvDis~~al~~A~~n--------------~~~~-----~ 446 (570)
+..+|+|+|.|+|...+.+.+.+ | ...+++++|..|-..+.+++- +... +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999999988876543 1 126799999955333333321 1111 0
Q ss_pred -----c-cCCCCEEEEEcccccccccC----CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 447 -----T-KYNIPIKFIKSNWYNNLQNY----KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 447 -----~-~~~~~v~~~~~D~~~~l~~~----~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
. .....++++.||+.+.++.. ...||+++.++ |-+.... .+ .-..++.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~-f~p~~np-----------~~----------w~~~~~~ 195 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG-FAPAKNP-----------DM----------WNEQLFN 195 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS-SCC--CC-----------TT----------CSHHHHH
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC-CCCCCCh-----------hh----------hhHHHHH
Confidence 0 01235788999998777654 36899999986 3322111 00 0156777
Q ss_pred HHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEE
Q psy2395 517 NASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~ 553 (570)
.+.++++|||.+.- +.....+++.+.++||....
T Consensus 196 ~l~~~~~~g~~~~t---~~~~~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 196 AMARMTRPGGTFST---FTAAGFVRRGLQQAGFNVTK 229 (689)
T ss_dssp HHHHHEEEEEEEEE---SCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCCCEEEe---ccCcHHHHHHHHhCCeEEEe
Confidence 78889999998753 33446789999999998654
No 323
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.59 E-value=0.0025 Score=65.81 Aligned_cols=133 Identities=11% Similarity=0.149 Sum_probs=76.1
Q ss_pred CCCEEEEECCcccHHHHHHHHh---------------cCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEc---
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIY---------------SKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKS--- 458 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~---------------~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~--- 458 (570)
...+|+|+||++|..++.+... -++..+|+..|+-......+-+++.... ...+..|+.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpg 128 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPG 128 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEES
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecch
Confidence 3468999999999877665433 2346789999998888777766654210 0012344444
Q ss_pred ccccccccCCCceeEEEECCCCCCCCCcc-cCCCCc--cc----cccccccccC-CChHHHHHHHHHHhhccccCeEEEE
Q psy2395 459 NWYNNLQNYKKLFNIIVANPPYIPKGDIH-LNKGDL--RF----EPINALTDYS-NGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 459 D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~-~~~~~~--~~----ep~~al~~~~-~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
.+.. ...+.+++|+|+||-..+.-.... ...... -| .|..+..... .-...+..|++...+.|+|||.+++
T Consensus 129 SFy~-rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 129 SFYG-RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp CSSS-CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhh-ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 3332 233458999999986554332211 110000 00 0110000000 0013456788999999999999998
Q ss_pred EE
Q psy2395 531 EH 532 (570)
Q Consensus 531 ~~ 532 (570)
.+
T Consensus 208 ~~ 209 (359)
T 1m6e_X 208 TI 209 (359)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 324
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.49 E-value=0.0039 Score=63.45 Aligned_cols=144 Identities=16% Similarity=0.088 Sum_probs=87.9
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEECC
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANP 478 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~NP 478 (570)
.+|+|++||.|.+++.+.+.+ ---|.++|+++.+++.-+.|.. -.++.+|+.+.....-..+|+++.-|
T Consensus 1 mkvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~---------~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHS---------AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCC---------SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCC---------CCcccCChhhCCHhhCCcccEEEecC
Confidence 379999999999999987765 2457899999999998887753 25788999664332225799999999
Q ss_pred CCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-----C---CHHHHHHHHHHCCCe
Q psy2395 479 PYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-----N---QSNLVRKLLFKYGFS 550 (570)
Q Consensus 479 Py~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-----~---~~~~l~~ll~~~Gf~ 550 (570)
|--+.+...... -..+|+. ..+..+++ +.+.++|. ++++|--. . ....+.+.|.+.||.
T Consensus 70 PCQ~fS~ag~~~--g~~d~R~---------~L~~~~~r-~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~ 136 (331)
T 3ubt_Y 70 PSQSWSEGGSLR--GIDDPRG---------KLFYEYIR-ILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYD 136 (331)
T ss_dssp CGGGTEETTEEC--CTTCGGG---------HHHHHHHH-HHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEE
T ss_pred CCCCcCCCCCcc--CCCCchh---------HHHHHHHH-HHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcE
Confidence 854322100000 0011111 23444444 33356886 45555321 1 235566778888987
Q ss_pred eEEEEe---cC---CCCceEEE
Q psy2395 551 DIKSWR---DL---SGIERVTQ 566 (570)
Q Consensus 551 ~i~~~~---D~---~g~~R~~~ 566 (570)
.-...- |+ +.+.|+++
T Consensus 137 v~~~vlna~~yGvPQ~R~Rvfi 158 (331)
T 3ubt_Y 137 VHIILLNANDYGVAQDRKRVFY 158 (331)
T ss_dssp EEEEEEEGGGTTCSBCCEEEEE
T ss_pred EEEEecccccCCCCcccceEEE
Confidence 643332 22 45667654
No 325
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.35 E-value=0.026 Score=63.20 Aligned_cols=132 Identities=13% Similarity=0.168 Sum_probs=85.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-----------CCCcEEEEEeC---CHHHHHHHHH-----------HHHhh-----c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-----------KNKIEIIATDI---SKFALKIAKK-----------NAKKK-----L 446 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-----------~~~~~V~gvDi---s~~al~~A~~-----------n~~~~-----~ 446 (570)
+.-+|+|+|-|+|...+...+.+ ....+++++|. +++-+..+-. ..... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34689999999999887776543 11257999999 6666653322 11111 0
Q ss_pred -----c-cCCCCEEEEEcccccccccC----CCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHH
Q psy2395 447 -----T-KYNIPIKFIKSNWYNNLQNY----KKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516 (570)
Q Consensus 447 -----~-~~~~~v~~~~~D~~~~l~~~----~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~ 516 (570)
. .....+++..+|+.+.++.. ...||+|+.++ |.+... |.+ .-..++.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~n-----------p~~----------w~~~~~~ 203 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKN-----------PDM----------WTQNLFN 203 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGC-----------GGG----------SCHHHHH
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCC-----------hhh----------hhHHHHH
Confidence 0 01234678889997766644 36799999986 332211 110 0156788
Q ss_pred HHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEE
Q psy2395 517 NASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 517 ~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~ 553 (570)
.+.++++|||.+.- +.....+++.+.++||..-.
T Consensus 204 ~l~~~~~~g~~~~t---~~~~~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 204 AMARLARPGGTLAT---FTSAGFVRRGLQDAGFTMQK 237 (676)
T ss_dssp HHHHHEEEEEEEEE---SCCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHhCCCCEEEe---ccCcHHHHHHHHhCCeEEEe
Confidence 88889999998763 33446789999999997543
No 326
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.31 E-value=0.0048 Score=62.04 Aligned_cols=79 Identities=11% Similarity=0.178 Sum_probs=58.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcE-EEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc-C--CCce
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIE-IIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-Y--KKLF 471 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~-V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-~--~~~f 471 (570)
..+.+++|++||.|.+++.+...+- ... |+++|+++.+++.-+.|.. ...++.+|+.+.... . .+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~--------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ--------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT--------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC--------CCceeCCChHHccHHHhcccCCc
Confidence 3566999999999999999887653 233 6999999999988887753 135788998664321 0 1469
Q ss_pred eEEEECCCCCCC
Q psy2395 472 NIIVANPPYIPK 483 (570)
Q Consensus 472 D~Iv~NPPy~~~ 483 (570)
|+++..||.-+.
T Consensus 85 Dll~ggpPCQ~f 96 (295)
T 2qrv_A 85 DLVIGGSPCNDL 96 (295)
T ss_dssp SEEEECCCCGGG
T ss_pred CEEEecCCCccc
Confidence 999999997543
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.20 E-value=0.0044 Score=63.17 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=52.2
Q ss_pred HHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 386 LVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 386 l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
|++.++.....++..|||.+||||..+++..+.+ .+.+|+|+++.+++.|++++.. .......+++|+.+
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r~~~----~~~~~~~~~~~~~~ 310 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFRFLD----NNISEEKITDIYNR 310 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGGGSC----SCSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHHHHh----cccchHHHHHHHHH
Confidence 4444444445678899999999999999988664 5899999999999999998874 23334455555533
No 328
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.19 E-value=0.0057 Score=62.20 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=46.8
Q ss_pred HHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCH---HHHHHHHHHHHh
Q psy2395 384 ELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISK---FALKIAKKNAKK 444 (570)
Q Consensus 384 ~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~---~al~~A~~n~~~ 444 (570)
..|++.++.....++..|||.+||||..++++.+.+ .+.+|+|+++ ..++.|++++..
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHHHH
Confidence 445555555545678899999999999999988775 5899999999 999999998865
No 329
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=95.47 E-value=0.073 Score=43.26 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCcccc-CCHHHHHHHHHHHhhhhhHHH-HHHHH
Q psy2395 4 LMLSKLEKFSKRLKELDFLLTQKEVH-NNIKDYCKKVREHSFLYPIVE-LYNNY 55 (570)
Q Consensus 4 ~~~~~l~~~~~r~~~l~~~l~~p~~w-~d~~~~~~l~ke~~~L~~~v~-~~~~~ 55 (570)
.|-..|+.+..+..+|+..|+||+|. +|+.+..++.+++..++.-++ .|.+|
T Consensus 26 ~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erW 79 (89)
T 2lw1_A 26 QLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERW 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999987 689999999998888776554 34444
No 330
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.44 E-value=0.012 Score=63.02 Aligned_cols=78 Identities=13% Similarity=0.185 Sum_probs=56.9
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc------------
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ------------ 465 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~------------ 465 (570)
..+++|++||.|.+++.+.+.+ ...|+++|+++.+++.-+.|... .....++++|+.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANHYC-----DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhccc-----CCCcceeccchhhhhhccccccchhhHH
Confidence 4689999999999999987654 23589999999999988888631 1234567788865431
Q ss_pred ----cCCCceeEEEECCCCCC
Q psy2395 466 ----NYKKLFNIIVANPPYIP 482 (570)
Q Consensus 466 ----~~~~~fD~Iv~NPPy~~ 482 (570)
.....+|+|+.-||--+
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~ 181 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQP 181 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCC
T ss_pred hhhhhcCCCCCEEEecCCCcc
Confidence 11146899999998543
No 331
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.50 E-value=0.085 Score=55.37 Aligned_cols=63 Identities=8% Similarity=0.087 Sum_probs=49.5
Q ss_pred CCCCEEEEECCcccHHHHHHH-HhcCCCcEEEEEeCCHHHHHHHHHHHHh--hcccCC-CCEEEEEccc
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIA-IYSKNKIEIIATDISKFALKIAKKNAKK--KLTKYN-IPIKFIKSNW 460 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la-~~~~~~~~V~gvDis~~al~~A~~n~~~--~~~~~~-~~v~~~~~D~ 460 (570)
+++..|+|+||+.|..++.++ +..++..+|+++|.+|...+..++|+.. |. .. .+++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~--~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDT--NFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTS--TTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhcc--CCCCCEEEEEeEE
Confidence 467899999999999999988 5554347999999999999999999986 31 12 4577665544
No 332
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.30 E-value=0.36 Score=47.14 Aligned_cols=128 Identities=12% Similarity=0.033 Sum_probs=79.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHh------cCCCcEEEEEeC-----CH----------------------HHHHHHHH--
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIY------SKNKIEIIATDI-----SK----------------------FALKIAKK-- 440 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~------~~~~~~V~gvDi-----s~----------------------~al~~A~~-- 440 (570)
.-+..|+|+||-.|..++.++.. .....+|+|+|. .+ +.+.....
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44679999999999988887643 112578999992 21 01111111
Q ss_pred -HHHhhcccCCCCEEEEEccccccccc-----CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHH
Q psy2395 441 -NAKKKLTKYNIPIKFIKSNWYNNLQN-----YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEI 514 (570)
Q Consensus 441 -n~~~~~~~~~~~v~~~~~D~~~~l~~-----~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~ 514 (570)
|....+ ....++.++.|++.+.++. +..+||+|..+-- -.+.+...
T Consensus 148 ~~~~~~g-~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---------------------------~Y~~t~~~ 199 (257)
T 3tos_A 148 ECSDFFG-HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---------------------------LYEPTKAV 199 (257)
T ss_dssp HTTSTTT-TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---------------------------CHHHHHHH
T ss_pred hhhhhcC-CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---------------------------ccchHHHH
Confidence 111111 0135799999999876653 2347999998531 12345677
Q ss_pred HHHHhhccccCeEEEEE-Ec--CCC--HHHHHHHHHHCCCee
Q psy2395 515 VKNASKYLVKNGLLLIE-HG--YNQ--SNLVRKLLFKYGFSD 551 (570)
Q Consensus 515 l~~~~~~LkpgG~l~~~-~~--~~~--~~~l~~ll~~~Gf~~ 551 (570)
++.+...|+|||++++. ++ ... ...+.+++.+.|.+.
T Consensus 200 le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~~~~~~~i 241 (257)
T 3tos_A 200 LEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVLGLDHAPL 241 (257)
T ss_dssp HHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHTCTTSSCC
T ss_pred HHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHHhhCCCeE
Confidence 88889999999999983 22 122 344566666666553
No 333
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=93.77 E-value=0.47 Score=49.53 Aligned_cols=46 Identities=17% Similarity=-0.036 Sum_probs=36.9
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcE----EEEEeCCHHHHHHHHHHHH
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIE----IIATDISKFALKIAKKNAK 443 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~----V~gvDis~~al~~A~~n~~ 443 (570)
..+|+|++||.|.+...+.+.+.+..- |.++|+++.++..-+.|..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 458999999999999998765410113 7889999999999888875
No 334
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.03 E-value=0.094 Score=53.24 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=61.8
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE--cccccccccCCCcee
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK--SNWYNNLQNYKKLFN 472 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~--~D~~~~l~~~~~~fD 472 (570)
.++.+||-.|+|. |.+++.+|+.. +++|+++|.+++.++.+++. +....+-. .|+.+.+....+.+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l--------Ga~~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRL--------GAEVAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHT--------TCSEEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHc--------CCCEEEeCCCcCHHHHHHHhCCCCC
Confidence 5678999999985 88888998876 57999999999998887542 22221211 122111111114689
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+|+-+.. . ...++.+.+.|+++|.+++
T Consensus 235 ~vid~~g------------------------~-------~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 235 GVLVTAV------------------------S-------PKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp EEEESSC------------------------C-------HHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeCC------------------------C-------HHHHHHHHHHhccCCEEEE
Confidence 9887421 0 2456677779999999875
No 335
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.62 E-value=0.16 Score=52.33 Aligned_cols=43 Identities=30% Similarity=0.368 Sum_probs=35.8
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|||. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHH
Confidence 5678999999986 88888888776 35 79999999999988864
No 336
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.59 E-value=0.15 Score=59.16 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=54.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc------------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN------------L 464 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~------------l 464 (570)
...+++|++||.|.+++.+.+.+- .-.+.|+|+++.+++.-+.|... ..++.+|+.+. .
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~-~~vv~avEid~~A~~ty~~N~p~--------~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNPG--------STVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTS-EEEEEEECSSHHHHHHHHHHCTT--------SEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCCeEEEeccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCC--------CccccccHHHHhhhccchhhhhhh
Confidence 346899999999999999877652 13578999999999988877542 34566665321 0
Q ss_pred c--c-CCCceeEEEECCCCCC
Q psy2395 465 Q--N-YKKLFNIIVANPPYIP 482 (570)
Q Consensus 465 ~--~-~~~~fD~Iv~NPPy~~ 482 (570)
. . ..+.+|+|+.-||--.
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~ 630 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQG 630 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTT
T ss_pred hhhcccCCCeeEEEEcCCCcc
Confidence 0 0 1247999999999543
No 337
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.40 E-value=1.5 Score=49.67 Aligned_cols=47 Identities=21% Similarity=0.286 Sum_probs=36.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhcC---C-CcEEEEEeCCHHHHHHHHHHHH
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSK---N-KIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~---~-~~~V~gvDis~~al~~A~~n~~ 443 (570)
+..+|+||+||.|.++.-+.+.+. . ---+.++|+++.|++.-+.|..
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 456899999999999988865531 0 0257899999999998888853
No 338
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=91.67 E-value=0.21 Score=49.00 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=46.9
Q ss_pred CceeEEEEC--CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE-cCC--CHHHHHHH
Q psy2395 469 KLFNIIVAN--PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH-GYN--QSNLVRKL 543 (570)
Q Consensus 469 ~~fD~Iv~N--PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~-~~~--~~~~l~~l 543 (570)
+++|+|++| |||.-.. |.. . .|....+.-++..+..+|+|||.+++-. +.. ..+.+...
T Consensus 205 ~k~DvV~SDMApn~sGh~----------yqQ--C----~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~ 268 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHH----------YQQ--C----EDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGA 268 (320)
T ss_dssp CCEEEEEEECCCCCCSCH----------HHH--H----HHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHH
T ss_pred CcCCEEEEcCCCCCCCcc----------ccc--c----chHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHH
Confidence 679999998 6654211 000 0 0111233347788899999999998844 444 46777777
Q ss_pred HHHCCCeeEEEEecC
Q psy2395 544 LFKYGFSDIKSWRDL 558 (570)
Q Consensus 544 l~~~Gf~~i~~~~D~ 558 (570)
+.+ -|..++..+--
T Consensus 269 LaR-~F~~Vr~vKP~ 282 (320)
T 2hwk_A 269 IAR-QFKFSRVCKPK 282 (320)
T ss_dssp HHT-TEEEEEEECCT
T ss_pred HHH-hcceeeeeCCC
Confidence 765 59888887753
No 339
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.47 E-value=0.55 Score=47.85 Aligned_cols=44 Identities=27% Similarity=0.379 Sum_probs=35.7
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 35678999999885 77888888775 45 99999999998888763
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.06 E-value=0.79 Score=46.56 Aligned_cols=44 Identities=23% Similarity=0.295 Sum_probs=35.2
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+|. |.+++.+|+.. +++|+++|.+++.++.+++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH
Confidence 35678999999874 77777888765 5689999999999888763
No 341
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.79 E-value=0.77 Score=46.54 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=46.5
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeE
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNI 473 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 473 (570)
..++.+||-+|+|. |.+++.+|+.. +++|+++|.+++-++.+++. +....+ .|. +.+ ...+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l--------Ga~~v~--~~~-~~~---~~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSM--------GVKHFY--TDP-KQC---KEELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHT--------TCSEEE--SSG-GGC---CSCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhc--------CCCeec--CCH-HHH---hcCCCE
Confidence 35788999999875 77788888876 57999999999988877641 222222 332 212 137999
Q ss_pred EEEC
Q psy2395 474 IVAN 477 (570)
Q Consensus 474 Iv~N 477 (570)
|+-.
T Consensus 238 vid~ 241 (348)
T 3two_A 238 IIST 241 (348)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9974
No 342
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.69 E-value=0.76 Score=47.16 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=36.1
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+|. |.+++.+|+.. +++|+++|.+++.++.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 35678999999984 77788888775 5789999999999888864
No 343
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.21 E-value=0.76 Score=47.18 Aligned_cols=44 Identities=14% Similarity=0.265 Sum_probs=35.9
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
..++.+||-.|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLA--GATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 35788999999875 77788888776 45 99999999999888865
No 344
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.90 E-value=0.31 Score=49.19 Aligned_cols=95 Identities=11% Similarity=0.081 Sum_probs=60.1
Q ss_pred CCCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE--cccccccc-cCCC
Q psy2395 395 FEKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK--SNWYNNLQ-NYKK 469 (570)
Q Consensus 395 ~~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~--~D~~~~l~-~~~~ 469 (570)
..++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+.+.+ +....+-. .|+.+.+. ...+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEEL-------GFDGAIDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-------CCSEEEETTTSCHHHHHHHHCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc-------CCCEEEECCCHHHHHHHHHhcCC
Confidence 357889999998 5677777777765 579999999998877763222 22211211 12211111 1124
Q ss_pred ceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 470 LFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 470 ~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
.+|+|+.+.. ...+..+.+.|+++|.+++
T Consensus 218 ~~d~vi~~~g--------------------------------~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 218 GIDVFFDNVG--------------------------------GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp CEEEEEESSC--------------------------------HHHHHHHHTTEEEEEEEEE
T ss_pred CceEEEECCC--------------------------------cchHHHHHHHHhhCCEEEE
Confidence 6999988531 1356677789999998875
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.89 E-value=0.46 Score=47.88 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=32.1
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIA 438 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A 438 (570)
.++.+||-.|| |.|..+..+++.. +++|+++|.+++.++.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 46789999998 5666666666654 57999999999888776
No 346
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.86 E-value=1 Score=45.84 Aligned_cols=45 Identities=29% Similarity=0.285 Sum_probs=36.7
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcE-EEEEeCCHHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIE-IIATDISKFALKIAKKN 441 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~-V~gvDis~~al~~A~~n 441 (570)
..++.+||=+|+|. |.+++.+|+.. +++ |+++|.+++.++.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh
Confidence 35678899999875 77788888876 455 99999999999999876
No 347
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.73 E-value=0.36 Score=44.55 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=30.9
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.++.+||..|+ |.|.....+++.. +++|+++|.+++.++.++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence 46789999994 4566666666554 479999999998876654
No 348
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=89.39 E-value=0.11 Score=66.52 Aligned_cols=105 Identities=20% Similarity=0.197 Sum_probs=50.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCC----CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCce
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKN----KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLF 471 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~----~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 471 (570)
.+..+||++|.|+|..+..+...... ....+.+|+|+...+.|++.++.. ++..-.-|..+........|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 45679999999999876655443321 247888999998888888776531 12221112211101112579
Q ss_pred eEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 472 NIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 472 D~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
|+||+.-..+.. ......+.++.++|+|||++++.
T Consensus 1313 dlvia~~vl~~t-------------------------~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1313 DLLVCNCALATL-------------------------GDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp CEEEEECC---------------------------------------------CCEEEEE
T ss_pred eEEEEccccccc-------------------------ccHHHHHHHHHHhcCCCcEEEEE
Confidence 999984221111 12245677888899999998774
No 349
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.08 E-value=0.76 Score=46.50 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=61.5
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEE-Eccccccccc--CCCc
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFI-KSNWYNNLQN--YKKL 470 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~-~~D~~~~l~~--~~~~ 470 (570)
..++.+||-+|+|. |.+++.+|+... +.+|+++|.+++-++.+++. +....+- ..|+.+.+.. ....
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~l--------Ga~~~i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAREV--------GADAAVKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHHT--------TCSEEEECSTTHHHHHHHHHGGGC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHc--------CCCEEEcCCCcHHHHHHHHhCCCC
Confidence 35678999999875 777888887653 47999999999998888642 2221111 1122121111 0136
Q ss_pred eeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 471 FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 471 fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+|+|+-.-. + ...+..+.+.|+++|.+++
T Consensus 240 ~d~v~d~~G------------------------~-------~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 240 ATAVFDFVG------------------------A-------QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp EEEEEESSC------------------------C-------HHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEECCC------------------------C-------HHHHHHHHHHHhcCCEEEE
Confidence 999987321 0 2356677779999999876
No 350
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.78 E-value=1.9 Score=41.67 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=54.4
Q ss_pred CCCEEEEECCccc-HHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGSG-AIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG-~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
+++++|=-|++++ .++..+|+.+ ..+++|+.+|.+++.++.+.+.+... .+.++.++..|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL---NQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG---TCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4668888886442 2444444322 22589999999999888887776652 34468899999865311
Q ss_pred cCCCceeEEEECCCCCC
Q psy2395 466 NYKKLFNIIVANPPYIP 482 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~ 482 (570)
..-++.|++|.|..+..
T Consensus 82 ~~~G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFAN 98 (256)
T ss_dssp HHHCCCSEEEECCCCCC
T ss_pred HHhCCCCEEEecccccc
Confidence 11168999999976543
No 351
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=88.70 E-value=0.53 Score=56.21 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=54.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc-------------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN------------- 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~------------- 463 (570)
...+++|++||.|.+++.+.+.+. .-.+.++|+++.+++.-+.|... ..++.+|+.+.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~-~~vv~avEid~~A~~ty~~N~p~--------~~~~~~DI~~l~~~~~~gdi~~~~ 920 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFRLNNPG--------TTVFTEDCNVLLKLVMAGEVTNSL 920 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTS-EEEEEEECCSHHHHHHHHHHCTT--------SEEECSCHHHHHHHHTTTCSBCSS
T ss_pred CCceEEecccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCC--------CcEeeccHHHHhHhhhccchhhhh
Confidence 456899999999999999876541 13588999999999988877532 34555554321
Q ss_pred ---cccCCCceeEEEECCCCCCC
Q psy2395 464 ---LQNYKKLFNIIVANPPYIPK 483 (570)
Q Consensus 464 ---l~~~~~~fD~Iv~NPPy~~~ 483 (570)
++ ..+.+|+|+.-||--..
T Consensus 921 ~~~lp-~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 921 GQRLP-QKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp CCBCC-CTTTCSEEEECCCCTTT
T ss_pred hhhcc-ccCccceEEecCCCccc
Confidence 11 12468999999986443
No 352
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.24 E-value=1.5 Score=44.26 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=33.6
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 46789999997 5677777777765 579999999998887775
No 353
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.15 E-value=0.38 Score=48.70 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=35.6
Q ss_pred CCCCEEEEECCc--ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTG--SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcG--tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+| .|..++.+++.. +++|+++|.+++.++.+++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh
Confidence 567899999987 677788888766 5799999999998888875
No 354
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=87.89 E-value=0.77 Score=46.41 Aligned_cols=44 Identities=25% Similarity=0.310 Sum_probs=35.2
Q ss_pred CCCCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+| .|..++.+++.. +++|+++|.++..++.+++
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH
Confidence 3567899999986 477777777765 5799999999998888753
No 355
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.45 E-value=0.66 Score=47.42 Aligned_cols=43 Identities=26% Similarity=0.258 Sum_probs=35.3
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+|. |..++.+|+.. +++|+++|.+++.++.+++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH
Confidence 5678999999875 77777788776 5799999999998888754
No 356
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=87.14 E-value=1.2 Score=44.41 Aligned_cols=64 Identities=11% Similarity=0.172 Sum_probs=45.0
Q ss_pred CCCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEE
Q psy2395 396 EKKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNII 474 (570)
Q Consensus 396 ~~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 474 (570)
.++.+||=.|+| .|.+++.+|+.. +++|++++ +++-++.+++. +.. .++ .| .+.+ ...+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~l--------Ga~-~v~-~d-~~~v---~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKR--------GVR-HLY-RE-PSQV---TQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHH--------TEE-EEE-SS-GGGC---CSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHc--------CCC-EEE-cC-HHHh---CCCccEE
Confidence 568899999996 477888888876 57999999 99888887652 111 122 24 2323 4679999
Q ss_pred EE
Q psy2395 475 VA 476 (570)
Q Consensus 475 v~ 476 (570)
+-
T Consensus 204 ~d 205 (315)
T 3goh_A 204 FD 205 (315)
T ss_dssp EC
T ss_pred EE
Confidence 86
No 357
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=86.87 E-value=0.35 Score=49.27 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=35.2
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHH
Confidence 35678899999875 77778888765 45 89999999998888865
No 358
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=86.73 E-value=2.1 Score=43.74 Aligned_cols=43 Identities=26% Similarity=0.230 Sum_probs=34.6
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHH
Confidence 5678999999874 77777888775 45 89999999999888763
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.51 E-value=2.2 Score=43.37 Aligned_cols=44 Identities=20% Similarity=0.067 Sum_probs=35.3
Q ss_pred CCCCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|+| .|.+++.+|+.. +++|+++|.+++.++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 3567899999986 377777778765 4789999999998888865
No 360
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.24 E-value=2.5 Score=43.16 Aligned_cols=43 Identities=28% Similarity=0.238 Sum_probs=34.5
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 5678999999874 67777777765 45 89999999999888864
No 361
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.17 E-value=4.3 Score=41.34 Aligned_cols=43 Identities=21% Similarity=0.103 Sum_probs=34.5
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHH
Confidence 5678999999874 77777888765 45 89999999998888763
No 362
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.64 E-value=3 Score=41.51 Aligned_cols=90 Identities=12% Similarity=0.121 Sum_probs=57.5
Q ss_pred EEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEEEC
Q psy2395 400 KLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477 (570)
Q Consensus 400 ~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv~N 477 (570)
+||=.|+ |.|..++.+|+.. +++|++++.+++-++.+++. +....+-..+.........+.+|+|+-+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~l--------Ga~~vi~~~~~~~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKSL--------GANRILSRDEFAESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHH--------TCSEEEEGGGSSCCCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc--------CCCEEEecCCHHHHHhhcCCCccEEEEC
Confidence 4888886 5788888888876 57999999999988888652 1111121122111001112468888762
Q ss_pred CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 478 PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 478 PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
- | ...+..+.++|+++|.+++.
T Consensus 219 ~----------------------------g----~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 219 V----------------------------G----DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp S----------------------------C----HHHHHHHHHTEEEEEEEEEC
T ss_pred C----------------------------C----cHHHHHHHHHHhcCCEEEEE
Confidence 1 1 12567778899999998763
No 363
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=85.57 E-value=1.8 Score=43.69 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=34.3
Q ss_pred CCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 397 KKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++.+||-+|+|. |.+++.+|+...++++|+++|.+++.++.+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 678999999974 67777777764113689999999999888864
No 364
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.50 E-value=1.9 Score=44.34 Aligned_cols=42 Identities=24% Similarity=0.198 Sum_probs=34.0
Q ss_pred CCCCEEEEECCc-ccHHHHHHHHhcCCC-cEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGTG-SGAIAIAIAIYSKNK-IEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGcG-tG~i~l~la~~~~~~-~~V~gvDis~~al~~A~ 439 (570)
.++.+||-+|+| .|.+++.+|+.. + .+|+++|.+++.++.++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHc--CCceEEEEcCCHHHHHHHH
Confidence 467899999976 467777788765 5 59999999999888876
No 365
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.34 E-value=2.8 Score=42.73 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=34.1
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~ 439 (570)
.++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.++
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHH
Confidence 5678999999874 77777788765 45 8999999999888875
No 366
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=85.06 E-value=2.9 Score=42.14 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=33.4
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH
Confidence 56789999998 4677777777654 5799999999988776653
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.83 E-value=1.3 Score=44.68 Aligned_cols=43 Identities=28% Similarity=0.264 Sum_probs=35.3
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|++++.+++.++.+++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh
Confidence 46789999997 4677888888776 5799999999998887765
No 368
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.59 E-value=2.3 Score=40.68 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=52.6
Q ss_pred CCEEEEECCcccHHHHHHHHhc-C-CCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-K-NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~-~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
+.+||=.| |+|.++..+++.+ . .+++|++++.++..++.+...+.. .+.++.++.+|+.+....
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA----EGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh----cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45666555 6777887777543 2 257999999998877766666654 244688999998653110
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
..+.+|+||.|.-.
T Consensus 79 ~~g~id~li~~Ag~ 92 (276)
T 1wma_A 79 EYGGLDVLVNNAGI 92 (276)
T ss_dssp HHSSEEEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 01379999998654
No 369
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=84.51 E-value=3.2 Score=42.41 Aligned_cols=43 Identities=28% Similarity=0.203 Sum_probs=34.4
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+|. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 4678999999873 77777888775 45 89999999998888753
No 370
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=84.48 E-value=4.2 Score=39.53 Aligned_cols=82 Identities=9% Similarity=0.070 Sum_probs=49.7
Q ss_pred CEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 452 PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 452 ~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
++++.+.|+.+.+ ..+=|+|.++|||.+... .|. ..-+.+.+.++.+.+..+=+.||.+++.
T Consensus 149 ~v~i~~~Df~~~i---~~~~~fvY~DPPY~~~~~--------~Y~-------~~f~~~d~~~L~~~l~~l~~~g~~~~lS 210 (259)
T 1yf3_A 149 KIIFSSLHFKDVK---ILDGDFVYVDPPYLITVA--------DYN-------KFWSEDEEKDLLNLLDSLNDRGIKFGLS 210 (259)
T ss_dssp GEEEECCCGGGCC---CCTTEEEEECCCCTTSCC--------GGG-------GGCCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEcCCHHHHh---CCCCeEEEECCCCCCccc--------hhc-------cCCCHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 4899999998766 244589999999986421 121 1123345566666655443456776664
Q ss_pred EcCC----CHHHHHHHHHHCCCeeEE
Q psy2395 532 HGYN----QSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 532 ~~~~----~~~~l~~ll~~~Gf~~i~ 553 (570)
.... ..+.+.++.. ||....
T Consensus 211 ~~d~~~~~~~~~i~~~y~--~~~i~~ 234 (259)
T 1yf3_A 211 NVLEHHGKENTLLKEWSK--KYNVKH 234 (259)
T ss_dssp EESEETTEECHHHHHHHT--TSEEEE
T ss_pred eecCccccccHHHHHHHh--CCeEEE
Confidence 4322 2366777773 676543
No 371
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.43 E-value=5.3 Score=39.89 Aligned_cols=110 Identities=9% Similarity=0.078 Sum_probs=67.3
Q ss_pred CCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccC--CCcee---
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNY--KKLFN--- 472 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD--- 472 (570)
...|++||||-=..+..+. .+.+.+++=|| .|..++..++.+...+.....+..++.+|+.+.+... ...||
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 4579999999776654443 13357999999 6999999998887532222446889999987622110 01122
Q ss_pred --EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEc
Q psy2395 473 --IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533 (570)
Q Consensus 473 --~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~ 533 (570)
++++- .++.|=| -+....+++.+...+.||++++++..
T Consensus 180 Pt~~i~E-------------gvl~Yl~----------~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 180 RTAWLAE-------------GLLMYLP----------ATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp CEEEEEC-------------SCGGGSC----------HHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CEEEEEe-------------chHhhCC----------HHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 33331 1111111 12346778877777888888888764
No 372
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=84.31 E-value=5.3 Score=40.16 Aligned_cols=45 Identities=31% Similarity=0.461 Sum_probs=33.2
Q ss_pred CCCCCEEEEECCc--ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTG--SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcG--tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-.|+| .|..++.+++... +++|+++|.+++.++.+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH
Confidence 3567899999997 4555666665531 3689999999998887753
No 373
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=84.29 E-value=0.72 Score=46.27 Aligned_cols=43 Identities=23% Similarity=0.094 Sum_probs=34.2
Q ss_pred CCCCEEEEEC-C-cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMG-T-GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlG-c-GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.| + |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4678999988 3 4677777777765 5799999999998888864
No 374
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.25 E-value=4.5 Score=39.20 Aligned_cols=122 Identities=19% Similarity=0.183 Sum_probs=69.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC------------HHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS------------KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis------------~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.+|.+ ...++.+...+.. .+.++.++.+|+.+.
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----TGRKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----TTSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----cCCceEEEEccCCCH
Confidence 356777777655 4555555432 235799999987 6666666655554 355799999998653
Q ss_pred ccc---------CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 464 LQN---------YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 464 l~~---------~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
... .-+++|++|.|.-+.... ....... ++. .+. -.+.....+++.+...++.+|.+++.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~--~~~--~~~---~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQA--FAD--AFD---VDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHH--HHH--HHH---HHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHH--HHH--Hhh---hhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 210 014799999996654322 1000000 000 000 00112235666777788888887764
No 375
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.89 E-value=0.76 Score=46.80 Aligned_cols=42 Identities=26% Similarity=0.231 Sum_probs=32.9
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH
Confidence 46789999997 4666677777665 579999999998887664
No 376
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.74 E-value=0.8 Score=46.44 Aligned_cols=42 Identities=33% Similarity=0.444 Sum_probs=33.2
Q ss_pred CCCEEEEECCc-ccHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 397 KKIKLLEMGTG-SGAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~~VLDlGcG-tG~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
++.+||-+|+| .|..++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 57789999986 366777777765 46 89999999998888763
No 377
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.47 E-value=4.5 Score=34.85 Aligned_cols=67 Identities=12% Similarity=0.161 Sum_probs=43.1
Q ss_pred CEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccC-CCceeEE
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNY-KKLFNII 474 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~-~~~fD~I 474 (570)
.+|+=+||| .++..+++.. ..+..|+++|.+++.++.++. . .+.++.+|..+. +... -..+|+|
T Consensus 8 ~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~-------g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 8 NHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE---R-------GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---T-------TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---c-------CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 468888875 4555554332 125789999999998877653 1 256788998653 2111 1468998
Q ss_pred EEC
Q psy2395 475 VAN 477 (570)
Q Consensus 475 v~N 477 (570)
++-
T Consensus 76 i~~ 78 (140)
T 3fwz_A 76 ILT 78 (140)
T ss_dssp EEC
T ss_pred EEE
Confidence 874
No 378
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.47 E-value=1 Score=45.60 Aligned_cols=43 Identities=33% Similarity=0.245 Sum_probs=35.4
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh
Confidence 46789999998 5788888888765 5799999999998888763
No 379
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.41 E-value=4.4 Score=41.41 Aligned_cols=42 Identities=26% Similarity=0.227 Sum_probs=34.2
Q ss_pred CCCCEEEEECCc-ccHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGTG-SGAIAIAIAIYSKNKI-EIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGcG-tG~i~l~la~~~~~~~-~V~gvDis~~al~~A~ 439 (570)
.++.+||=+|+| .|.+++.+|+.. ++ +|+++|.+++.++.|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~--Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTA--GASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHH--TCSCEEEECSCTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHH
Confidence 567889999987 477788888776 45 8999999999988775
No 380
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.24 E-value=7.3 Score=39.93 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=78.0
Q ss_pred HHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 383 TELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 383 t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
-++|++.+... ..+.+||.++.+.|.++..++.. .++.+.=|-.+...++.|+..|+.. ...+++... .+
T Consensus 26 d~~ll~~~~~~--~~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~~~--~~ 95 (375)
T 4dcm_A 26 DEYLLQQLDDT--EIRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGID-ESSVKFLDS--TA 95 (375)
T ss_dssp HHHHHHTTTTC--CCCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCC-GGGSEEEET--TS
T ss_pred HHHHHHhhhhc--cCCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCC-ccceEeccc--cc
Confidence 34555554322 24468999999999999998743 2455543666777888999886421 112555432 12
Q ss_pred ccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEEcC-CCHHHHH
Q psy2395 463 NLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGY-NQSNLVR 541 (570)
Q Consensus 463 ~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~l~ 541 (570)
.....||+|+.-.|- .+......+..+...|.+|+.+++.-.. .-...+.
T Consensus 96 ---~~~~~~~~v~~~lpk--------------------------~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~ 146 (375)
T 4dcm_A 96 ---DYPQQPGVVLIKVPK--------------------------TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 146 (375)
T ss_dssp ---CCCSSCSEEEEECCS--------------------------CHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHH
T ss_pred ---ccccCCCEEEEEcCC--------------------------CHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHH
Confidence 223679999985441 2345677888889999999998653322 1224455
Q ss_pred HHHHHC
Q psy2395 542 KLLFKY 547 (570)
Q Consensus 542 ~ll~~~ 547 (570)
+.|.+.
T Consensus 147 ~~l~~~ 152 (375)
T 4dcm_A 147 ELFEKV 152 (375)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 556554
No 381
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.96 E-value=8.3 Score=32.45 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=42.2
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cc-cCCCceeE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQ-NYKKLFNI 473 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~-~~~~~fD~ 473 (570)
+.+|+=+|+ |.++..+++.+ ..+.+|+.+|.+++.++.++.. . .+.++.+|..+. +. ..-..+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-------~--~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------I--DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------C--SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-------c--CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 357777766 66666665432 1247899999999876554321 1 245677776432 11 11246899
Q ss_pred EEECCC
Q psy2395 474 IVANPP 479 (570)
Q Consensus 474 Iv~NPP 479 (570)
|+...|
T Consensus 73 vi~~~~ 78 (140)
T 1lss_A 73 YIAVTG 78 (140)
T ss_dssp EEECCS
T ss_pred EEEeeC
Confidence 998644
No 382
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.34 E-value=4.9 Score=41.48 Aligned_cols=47 Identities=13% Similarity=0.274 Sum_probs=35.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhcC------CCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSK------NKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~------~~~~V~gvDis~~al~~A~~n~~ 443 (570)
.+..|+|+|.|+|.++.-+.+... ...+++.||+||...+.-++.+.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 345799999999999887765321 24589999999988876655543
No 383
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=82.34 E-value=3 Score=43.66 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=45.4
Q ss_pred CCccccchhH-----HHHHHHHHhhcC-CCCCEEEEECCcccHHHHHHHHhc----CCCcEEEEEeCCHHHHHHHHHHHH
Q psy2395 374 SDVLIPRPET-----ELLVDLIVKKTF-EKKIKLLEMGTGSGAIAIAIAIYS----KNKIEIIATDISKFALKIAKKNAK 443 (570)
Q Consensus 374 ~~~~~pr~~t-----~~l~~~~~~~~~-~~~~~VLDlGcGtG~i~l~la~~~----~~~~~V~gvDis~~al~~A~~n~~ 443 (570)
.+-|+..|+. +.+..++..... ..+..|+|+|.|+|.++.-+.+.. +...+++.||+||...+.-++.+.
T Consensus 108 ~GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 108 GSDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp --CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4566666543 333344333221 124799999999999987776433 112489999999998887777765
Q ss_pred h
Q psy2395 444 K 444 (570)
Q Consensus 444 ~ 444 (570)
.
T Consensus 188 ~ 188 (432)
T 4f3n_A 188 A 188 (432)
T ss_dssp H
T ss_pred c
Confidence 3
No 384
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=82.33 E-value=21 Score=31.06 Aligned_cols=93 Identities=8% Similarity=0.025 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH------HHHHHhhCChhHHHH
Q psy2395 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDI------ITAKEMLNDLEMRNF 77 (570)
Q Consensus 4 ~~~~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~------~~~~~l~~D~~~~~~ 77 (570)
.+..+++.++.-.++|.+....-.+-+.+++...+.+++..+..-++..+.|....+=. .||....+..+++.+
T Consensus 25 ~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~ekP~WKKiWE~EL~~VceEQqfl~~ 104 (141)
T 3okq_A 25 TLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDTEKPHWKKTWEAELDKVCEEQQFLTL 104 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 36778888888888888888887788899999999999999988888888776554322 233333345666777
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2395 78 ALDEINLAKKRIFDIELEI 96 (570)
Q Consensus 78 a~~e~~~~~~~~~~~~~~l 96 (570)
.++-+.+|...++++.+-+
T Consensus 105 QedL~~DL~eDL~ka~etf 123 (141)
T 3okq_A 105 QEELILDLKEDLGKALETF 123 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777777777666544
No 385
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.16 E-value=2.1 Score=44.35 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=34.7
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++.+||=+|+|. |.+++.+|+.. ++ +|+++|.++.-++.+++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 4678999999864 67777788765 45 99999999999988864
No 386
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=81.93 E-value=1.4 Score=44.79 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=32.1
Q ss_pred CCC--CEEEEECC--cccHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 396 EKK--IKLLEMGT--GSGAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~--~~VLDlGc--GtG~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
.++ .+||-.|+ |.|..++.+++.. ++ +|+++|.+++.++.+++
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTS 204 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHH
Confidence 456 89999997 4556666666654 56 99999999988777654
No 387
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=81.89 E-value=3.5 Score=39.49 Aligned_cols=80 Identities=14% Similarity=0.056 Sum_probs=52.4
Q ss_pred CCCEEEEECCc-ccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTG-SGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcG-tG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
++.+||=.|++ +|.++..+++.+ ..+++|+.++.+....+.++..... . ..+.++.+|+.+...
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE----F-GSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH----T-TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH----c-CCcEEEECCCCCHHHHHHHHHHHH
Confidence 56788888874 366666666543 2257999999987666655555443 1 237889999865311
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
...++.|++|.|.-+.
T Consensus 88 ~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFA 103 (271)
T ss_dssp HHCSCEEEEEECCCCC
T ss_pred HHcCCCCEEEECCccC
Confidence 1115799999997654
No 388
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.70 E-value=2.6 Score=42.60 Aligned_cols=42 Identities=29% Similarity=0.340 Sum_probs=33.2
Q ss_pred CCCEEEEEC-Cc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 397 KKIKLLEMG-TG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~~VLDlG-cG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++.+||=.| +| .|..++.+++.. +++|+++|.+++.++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh
Confidence 577899884 44 577777778765 5799999999998888875
No 389
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.27 E-value=1.6 Score=44.58 Aligned_cols=43 Identities=23% Similarity=0.247 Sum_probs=35.0
Q ss_pred CCCCEEEEEC--CcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMG--TGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlG--cGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.| .|.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH
Confidence 5678999999 45788888888776 5799999999988887764
No 390
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.22 E-value=2.6 Score=42.97 Aligned_cols=41 Identities=17% Similarity=0.080 Sum_probs=31.6
Q ss_pred CCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 397 KKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 397 ~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
++.+||-+|+| .|..++.+|+.. +++|+++|.+++.++.++
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEAL 228 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 67899999976 356666677665 579999999998877665
No 391
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=81.17 E-value=1.4 Score=44.92 Aligned_cols=41 Identities=17% Similarity=0.099 Sum_probs=32.2
Q ss_pred CCCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 397 KKIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 397 ~~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
++.+||-+|+| .|.+++.+|+.. +++|+++|.+++.++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHH
Confidence 67899999976 466677777765 479999999998777765
No 392
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.12 E-value=1.3 Score=44.29 Aligned_cols=43 Identities=23% Similarity=0.110 Sum_probs=32.7
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH
Confidence 46789999983 4566666666655 4799999999988887765
No 393
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=81.01 E-value=11 Score=37.93 Aligned_cols=64 Identities=9% Similarity=0.174 Sum_probs=48.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcc-----c-------------CCCCEEEEEc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLT-----K-------------YNIPIKFIKS 458 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~-----~-------------~~~~v~~~~~ 458 (570)
+...|+.+|||....+..+....+ +.+++-||. |+.++.-++.+...+. + ...+..++.+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 456899999999999999886544 578888888 8888887777665310 0 1246889999
Q ss_pred cccc
Q psy2395 459 NWYN 462 (570)
Q Consensus 459 D~~~ 462 (570)
|+.+
T Consensus 175 DL~d 178 (334)
T 1rjd_A 175 DLND 178 (334)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 9876
No 394
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=81.00 E-value=13 Score=36.47 Aligned_cols=101 Identities=10% Similarity=0.148 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhhcccCCCCEEEE--EcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChH
Q psy2395 432 KFALKIAKKNAKKKLTKYNIPIKFI--KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLS 509 (570)
Q Consensus 432 ~~al~~A~~n~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~ 509 (570)
++.+..+.+.++. +++. ++|+.+.+... .+=|+|.+||||.+....... ..|. ...-+.+
T Consensus 156 ~~~l~~~~~~l~~--------v~i~~~~~Df~~~i~~~-~~~~fvY~DPPY~~~~~~~~f---~~Y~------~~~f~~~ 217 (284)
T 2dpm_A 156 EELISAISVYINN--------NQLEIKVGDFEKAIVDV-RTGDFVYFDPPYIPLSETSAF---TSYT------HEGFSFA 217 (284)
T ss_dssp HHHHHHHHHHHHH--------SEEEEEESCGGGGGTTC-CTTCEEEECCCCCCC-----C---CCCC------CSSCCHH
T ss_pred HHHHHHHHHHhCC--------CEEEEeCCCHHHHHHhc-CCCCEEEeCCCcccccCCCCc---cccc------cCCCCHH
Confidence 4455555554442 5666 99998876543 445899999999873211000 0010 0112345
Q ss_pred HHHHHHHHHhhccccCeEEEEEEcCCCHHHHHHHHHHCCCeeEEE
Q psy2395 510 SIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKS 554 (570)
Q Consensus 510 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~l~~ll~~~Gf~~i~~ 554 (570)
.+.++.+.+..+=+.||.+++.... .+.+.++.. ||....+
T Consensus 218 dh~~L~~~l~~l~~~g~~~~lS~~d--~~~i~~ly~--~~~i~~~ 258 (284)
T 2dpm_A 218 DQVRLRDAFKRLSDTGAYVMLSNSS--SALVEELYK--DFNIHYV 258 (284)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEES--CHHHHHHTT--TSEEEEE
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCC--CHHHHHHHc--CCeEEEE
Confidence 5666666655443457766655433 366677664 6765443
No 395
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=80.55 E-value=0.57 Score=47.46 Aligned_cols=42 Identities=24% Similarity=0.361 Sum_probs=32.8
Q ss_pred CCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 397 KKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
++.+||-+|+|. |..++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 677899999863 66777777765 46 89999999988777654
No 396
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=80.52 E-value=0.9 Score=45.71 Aligned_cols=43 Identities=28% Similarity=0.244 Sum_probs=33.9
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 46789999984 4677777777765 5799999999998887754
No 397
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=80.40 E-value=1.5 Score=44.54 Aligned_cols=42 Identities=21% Similarity=0.165 Sum_probs=32.4
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence 46789999984 4666666677664 579999999999888774
No 398
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.08 E-value=2 Score=43.63 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=29.9
Q ss_pred CEEEEECCc-ccHHH-HHHH-HhcCCCcE-EEEEeCCHH---HHHHHH
Q psy2395 399 IKLLEMGTG-SGAIA-IAIA-IYSKNKIE-IIATDISKF---ALKIAK 439 (570)
Q Consensus 399 ~~VLDlGcG-tG~i~-l~la-~~~~~~~~-V~gvDis~~---al~~A~ 439 (570)
.+||-+|+| .|.++ +.+| +.. +++ |+++|.+++ .++.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~ 219 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIE 219 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHH
Confidence 899999985 36666 7777 654 455 999999988 777775
No 399
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=79.92 E-value=5.4 Score=40.01 Aligned_cols=45 Identities=29% Similarity=0.262 Sum_probs=33.4
Q ss_pred CCCCCEEEEECCccc-HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGSG-AIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGtG-~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||=+|+|++ .+++.+++... +.+|+++|.+++-++.+++
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh
Confidence 357889999999864 45555555433 5899999999998777764
No 400
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=78.87 E-value=3.4 Score=42.05 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=59.9
Q ss_pred CCCEEEEEC-Cc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEE-ccccccccc-CCCcee
Q psy2395 397 KKIKLLEMG-TG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIK-SNWYNNLQN-YKKLFN 472 (570)
Q Consensus 397 ~~~~VLDlG-cG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~-~D~~~~l~~-~~~~fD 472 (570)
++.+||=.| +| .|.+++.+|+... +++|+++|.+++-++.+++. +....+-. .|+.+.+.. ..+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~l--------Gad~vi~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSL--------GAHHVIDHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHHT--------TCSEEECTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHc--------CCCEEEeCCCCHHHHHHHhcCCCce
Confidence 567899888 54 5888888888632 57999999999988887641 22111111 122121111 124799
Q ss_pred EEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 473 IIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 473 ~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
+|+-+-. -...+..+.++|+++|.+++.
T Consensus 242 vvid~~g-------------------------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTH-------------------------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSC-------------------------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC-------------------------------chhhHHHHHHHhcCCCEEEEE
Confidence 9887311 024566777899999998763
No 401
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.80 E-value=2 Score=42.42 Aligned_cols=44 Identities=16% Similarity=0.142 Sum_probs=34.9
Q ss_pred CCCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh
Confidence 356789999997 4677777888765 5799999999988877753
No 402
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=78.70 E-value=2.1 Score=42.91 Aligned_cols=43 Identities=21% Similarity=0.139 Sum_probs=33.9
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 46789999995 5677777777765 5799999999988887754
No 403
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=78.33 E-value=8.1 Score=36.96 Aligned_cols=131 Identities=14% Similarity=0.049 Sum_probs=68.8
Q ss_pred CCCEEEEECCccc-HHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGTGSG-AIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG-~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|++.| .++..+++.+ ..+++|+.++.++...+.+.+..... ...++.++.+|+.+....
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL---DRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS---SSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc---CCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 3567888887622 2444444322 22579999999887666666555532 122689999999653210
Q ss_pred -CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 467 -YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
..+++|++|.|..+...............+.....+ .-.+.....+++.+...++++|.+++..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH--NISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHH--HHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHH--HHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 014789999997654311000000000000000000 0001112346667777888889887754
No 404
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=77.61 E-value=3.3 Score=41.94 Aligned_cols=43 Identities=26% Similarity=0.210 Sum_probs=33.7
Q ss_pred CCCCEEEEEC--CcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMG--TGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlG--cGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-.| .|.|..++.+++.. +++|+++|.+++.++.+++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER 210 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh
Confidence 4678999884 34677777777765 5799999999999888865
No 405
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=77.11 E-value=5.7 Score=39.04 Aligned_cols=129 Identities=14% Similarity=0.057 Sum_probs=67.8
Q ss_pred CCCEEEEECCcc-cHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGS-GAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGt-G~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.+.++|=.|+++ +.++..+++.+ ..+++|+.+|.++...+.+....... + .+.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~-~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL----G-VKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH----T-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc----C-CeEEEEcCCCCHHHHHHHHHHHH
Confidence 356888888754 34555444332 22579999999987666555554432 1 36788999865311
Q ss_pred cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 466 NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
..-+++|++|.|.-+...............+.....+ .-.+.....+++.+...++.+|.+++..
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~--~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSM--HISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHH--HHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 0014789999997554210000000000000000000 0001122356667777888889887754
No 406
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=76.63 E-value=5.2 Score=38.32 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=53.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
.+.++|=.|++. .++..+++.+ ..+++|+.+|.++..++.+...+.. .+.++.++.+|+.+....
T Consensus 11 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 11 NDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ----AGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp TTCEEEECSCSS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 355677666554 4655555432 1257899999999888877766654 355789999998653210
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..++.|++|.|.-+.
T Consensus 86 ~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 86 QFGKITVLVNNAGGG 100 (256)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 014799999996544
No 407
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=76.45 E-value=4.3 Score=41.26 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=30.1
Q ss_pred CCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCH---HHHHHHHH
Q psy2395 398 KIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISK---FALKIAKK 440 (570)
Q Consensus 398 ~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~---~al~~A~~ 440 (570)
+.+||-.|+| .|..++.+++.. +++|+++|.++ +.++.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH
Confidence 7899999984 255556666655 46999999998 77776653
No 408
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=76.33 E-value=8.7 Score=37.66 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=48.0
Q ss_pred CEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 452 PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 452 ~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
++++.++|+.+.+...+ +=|+|.+||||.+..... .-..|. +..-+.+.+.++.+.+..+=+.||.+++.
T Consensus 157 ~v~i~~~Df~~~i~~~~-~~~fvY~DPPY~~~~~~~---~f~~Y~------~~~F~~~dh~~L~~~l~~l~~~~~~~~lS 226 (278)
T 2g1p_A 157 NAFFYCESYADSMARAD-DSSVVYCDPPYAPLSATA---NFTAYH------TNSFTLEQQAHLAEIAEGLVERHIPVLIS 226 (278)
T ss_dssp GEEEEECCHHHHHTTCC-TTEEEEECCSCCCC--------------------CCCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEeCCHHHHHHhcC-CCCEEEeCCcccccCCCC---Cccccc------cCCCCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 48999999977665433 558999999998632110 000010 11123445566666555443456766654
Q ss_pred EcCCCHHHHHHHHHHCCCeeEE
Q psy2395 532 HGYNQSNLVRKLLFKYGFSDIK 553 (570)
Q Consensus 532 ~~~~~~~~l~~ll~~~Gf~~i~ 553 (570)
.. ..+.+.+++. ||....
T Consensus 227 ~~--d~~~i~~ly~--~~~i~~ 244 (278)
T 2g1p_A 227 NH--DTMLTREWYQ--RAKLHV 244 (278)
T ss_dssp EE--CCHHHHHHTT--TSEEEE
T ss_pred cC--CCHHHHHHhc--CCcEEE
Confidence 33 3345666664 565543
No 409
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=76.33 E-value=12 Score=36.49 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=50.3
Q ss_pred CCCEEEEECCccc-HHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGSG-AIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG-~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.+.++|=.|+++| .++..+++.+ ..+++|+.++.++...+.+....... .++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHH
Confidence 4568888887643 2444444322 22578999999977666555554431 247889999865311
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
..-+++|++|.|.-+.
T Consensus 105 ~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHTSCCSEEEECCCCC
T ss_pred HhcCCCCEEEECCccC
Confidence 0115799999997544
No 410
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=75.93 E-value=14 Score=36.09 Aligned_cols=125 Identities=16% Similarity=0.155 Sum_probs=67.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHH-HHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFA-LKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~a-l~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.++.++.. .+.+...... .+.++.++.+|+.+...
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT----TTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356788778654 4666655433 235799999998753 3444443432 35578999999965311
Q ss_pred cCCCceeEEEECCCCCCCC-CcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 466 NYKKLFNIIVANPPYIPKG-DIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~~~~-~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
..-+++|++|.|.-..... .......+ .++- .+. -.+.....+++.+...++++|.+++..
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~-~~~~--~~~---vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAE-QLEK--TFR---INIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHH-HHHH--HHH---HHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHH-HHHH--HHH---HHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 0014799999986433211 00000000 0000 000 001122356677778888889877653
No 411
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=75.62 E-value=8.2 Score=36.89 Aligned_cols=122 Identities=7% Similarity=0.080 Sum_probs=68.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.+|.+++.++...... +.++.++.+|+.+... .
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 356788778654 4666655433 23579999999998876655443 2358899999865321 0
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
..+++|++|.|..+...........+ .++. .+. -.+.....+.+.+...++++|.+++..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~-~~~~--~~~---~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEA-SYDR--QFA---VNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHH-HHHH--HHH---HHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHH-HHHH--HHH---HhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 01479999999654432111000000 0000 000 001112345666777788888887643
No 412
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=75.40 E-value=3.2 Score=42.82 Aligned_cols=43 Identities=23% Similarity=0.172 Sum_probs=35.9
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAK 439 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~ 439 (570)
..++.+||-+|||. |.+++.+|+.. ++ +|+++|.+++.++.++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLL--GAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHH
Confidence 35678999999986 88888888876 45 9999999999888775
No 413
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=75.27 E-value=8.4 Score=37.25 Aligned_cols=78 Identities=18% Similarity=0.185 Sum_probs=55.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+++.+|=-|.++| ++..+|+.+ ..+++|+.+|.+++.++.+.+.+.. .+.++.++.+|+.+... .
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~----~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG----MGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4667777786666 555544332 2358999999999999888877765 45678999999965311 0
Q ss_pred CCCceeEEEECCC
Q psy2395 467 YKKLFNIIVANPP 479 (570)
Q Consensus 467 ~~~~fD~Iv~NPP 479 (570)
.-++.|++|.|--
T Consensus 81 ~~G~iDiLVNNAG 93 (254)
T 4fn4_A 81 TYSRIDVLCNNAG 93 (254)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 0168999999964
No 414
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=75.19 E-value=11 Score=35.91 Aligned_cols=79 Identities=16% Similarity=0.066 Sum_probs=50.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEE-eCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIAT-DISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gv-Dis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+ +.++...+.+...+.. .+.++.++.+|+.+....
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK----LGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT----TTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567887776655 555555432 225788888 7777777666666553 355688999998653110
Q ss_pred -CCCceeEEEECCCC
Q psy2395 467 -YKKLFNIIVANPPY 480 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy 480 (570)
.-++.|++|.|.-.
T Consensus 82 ~~~g~id~lv~nAg~ 96 (259)
T 3edm_A 82 DKFGEIHGLVHVAGG 96 (259)
T ss_dssp HHHCSEEEEEECCCC
T ss_pred HHhCCCCEEEECCCc
Confidence 01479999998643
No 415
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=74.97 E-value=8.1 Score=37.80 Aligned_cols=122 Identities=13% Similarity=0.044 Sum_probs=69.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+++.+|=-|+++| ++..+|+.+ ..+++|+.+|.+++.++.+.+.+ +.++.++.+|+.+... .
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4667777787666 555554432 23589999999999887664433 3357788899865311 1
Q ss_pred CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 467 YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.-++.|++|.|.-............+ .|+..+.. .+.-.-.+.+.+..+++.+|.++...
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e-~w~~~~~v-----Nl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEE-QYDDTFDR-----NVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHH-HHHHHHHH-----HTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCChhhccHH-HHHHHHHH-----HhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 11689999999654322211111000 01100000 11122356677778888888877643
No 416
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=74.90 E-value=2.4 Score=36.43 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=45.1
Q ss_pred CEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccC-CCceeEE
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNY-KKLFNII 474 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~-~~~fD~I 474 (570)
.+|+=+|| |.++..+++.+ ..+.+|+++|.+++.++.++.. .+.++.+|..+.. ... -..+|+|
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----------~~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----------GFDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------TCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----------CCcEEECCCCCHHHHHhCCcccCCEE
Confidence 46888888 45666665433 1257899999999887765431 1567889986532 111 1468999
Q ss_pred EECCC
Q psy2395 475 VANPP 479 (570)
Q Consensus 475 v~NPP 479 (570)
+...|
T Consensus 75 i~~~~ 79 (141)
T 3llv_A 75 LITGS 79 (141)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 98654
No 417
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=74.31 E-value=4.1 Score=40.57 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=32.9
Q ss_pred CCC-EEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 397 KKI-KLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~-~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++. +||-.|+ |.|..++.+++.. +++|++++.+++.++.+++
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV 192 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH
Confidence 443 7999997 5777888888776 5789999999888877754
No 418
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=73.27 E-value=5.6 Score=39.59 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=32.6
Q ss_pred CCC-EEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 397 KKI-KLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~-~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++. +||-.|+ |.|..++.+++.. +++|++++.+++.++.+++
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ 193 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 443 7999997 5677788888765 4689999999888877764
No 419
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.26 E-value=8.1 Score=31.37 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=45.5
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCC-cEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccCCCceeE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNK-IEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNYKKLFNI 473 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~-~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~~~~fD~ 473 (570)
..+|+=+|+ |.++..+++.+ ..+ .+|+++|.++..++.+. . ..+.++..|+.+.. ...-..+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~-------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---R-------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---T-------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---h-------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 457888888 66666655432 124 78999999998766554 1 12567778875421 111146899
Q ss_pred EEECCCC
Q psy2395 474 IVANPPY 480 (570)
Q Consensus 474 Iv~NPPy 480 (570)
||.+.|+
T Consensus 73 vi~~~~~ 79 (118)
T 3ic5_A 73 VISAAPF 79 (118)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9997664
No 420
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=72.64 E-value=3.1 Score=41.90 Aligned_cols=42 Identities=26% Similarity=0.355 Sum_probs=33.0
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||-+|+ |.|..++.+++.. +++|+++ .+++.++.+++
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH
Confidence 46789999994 4677888888775 5799999 88888777754
No 421
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=71.86 E-value=8.6 Score=40.15 Aligned_cols=43 Identities=19% Similarity=0.063 Sum_probs=34.1
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||=.|+ |.|..++.+++.. +++|++++.+++.++.+++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh
Confidence 56789999997 3577777777765 5799999999998888753
No 422
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=71.79 E-value=34 Score=33.63 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=31.0
Q ss_pred CCCCCEEEEEC-Cc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMG-TG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlG-cG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||=.| +| .|.+++.+|+.. +++|++++ ++..++.+++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~ 194 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKA 194 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHH
Confidence 35778999886 44 688888888876 57999997 5555666543
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=71.66 E-value=11 Score=36.31 Aligned_cols=125 Identities=14% Similarity=0.137 Sum_probs=67.0
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeC-CHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDI-SKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDi-s~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.++. +...++.....+.. .+.++.++.+|+.+....
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA----LGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35577777755 45666655433 23578998876 45555555555543 355789999998653110
Q ss_pred -CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 467 -YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
.-++.|++|.|.-............+ .++. .+.. .+.-...+.+.+...++++|.+++..
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~-~~~~--~~~~---N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEE-EFDR--VFSL---NTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHH-HHHH--HHHH---HTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHH-HHHH--HHHH---HhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 01478999998654432211100000 0000 0000 01112345566677788888887754
No 424
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.17 E-value=8.8 Score=40.28 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=35.1
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||=+|+ |.|.+++.+|+.. +++|++++.+++-++.+++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA 271 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh
Confidence 56789999997 4678888888876 5799999999998888854
No 425
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=71.12 E-value=17 Score=32.43 Aligned_cols=68 Identities=10% Similarity=0.101 Sum_probs=41.3
Q ss_pred CCEEEEECCcccHHHHHHHHhcC-C-CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccC--CCce
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSK-N-KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNY--KKLF 471 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~-~-~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~--~~~f 471 (570)
+.+|+=+|| |.++..+++... . +.+|+++|.+++.++.++. .+ +.++.+|..+. +... -..+
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--------~g--~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS--------EG--RNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--------TT--CCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--------CC--CCEEEcCCCCHHHHHhccCCCCC
Confidence 457887776 555555554321 1 3579999999988766542 12 44677776442 2211 2468
Q ss_pred eEEEEC
Q psy2395 472 NIIVAN 477 (570)
Q Consensus 472 D~Iv~N 477 (570)
|+|+..
T Consensus 107 d~vi~~ 112 (183)
T 3c85_A 107 KLVLLA 112 (183)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 999884
No 426
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=71.01 E-value=16 Score=35.73 Aligned_cols=125 Identities=13% Similarity=0.092 Sum_probs=67.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCH--HHHHHHHHHHHhhcccCCCCEEEEEcccccccc--------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISK--FALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ-------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~--~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~-------- 465 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+. ...+.+...+.. .+.++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE----CGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----TTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH----cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 35678877765 55666665433 2357899999873 344444444443 35578899999865311
Q ss_pred -cCCCceeEEEECCCCCCC-CCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 466 -NYKKLFNIIVANPPYIPK-GDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 466 -~~~~~fD~Iv~NPPy~~~-~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
...+.+|++|.|.-.... ........+ .++- .+. -.+.....+++.+...++++|.+++..
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~--~~~---vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSE-QFQQ--TFA---VNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHH-HHHH--HHH---HHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHH-HHHH--HHH---HHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 001579999998654321 111000000 0000 000 001122356677777888889887753
No 427
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=70.81 E-value=11 Score=37.48 Aligned_cols=45 Identities=29% Similarity=0.345 Sum_probs=33.9
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
..++.+||=.|+|. |.+++.+|+... ...++++|.+++-++.|++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH
Confidence 35778999999874 556667777653 3567899999998888764
No 428
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=70.75 E-value=17 Score=35.06 Aligned_cols=80 Identities=21% Similarity=0.091 Sum_probs=51.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC----------------HHHHHHHHHHHHhhcccCCCCEEEEEcc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS----------------KFALKIAKKNAKKKLTKYNIPIKFIKSN 459 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis----------------~~al~~A~~n~~~~~~~~~~~v~~~~~D 459 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|.+ ++.++.+...+.. .+.++.++.+|
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D 84 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG----HNRRIVTAEVD 84 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT----TTCCEEEEECC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh----cCCceEEEEcC
Confidence 3567887777655 555555432 235899999987 6666655555443 35578999999
Q ss_pred ccccccc---------CCCceeEEEECCCCC
Q psy2395 460 WYNNLQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 460 ~~~~l~~---------~~~~fD~Iv~NPPy~ 481 (570)
+.+.... ..++.|++|.|.-+.
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 9653110 014799999997543
No 429
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.76 E-value=11 Score=35.75 Aligned_cols=79 Identities=13% Similarity=-0.004 Sum_probs=54.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|.++..++.+...+.. .+.++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA----AGGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 3567777776655 555555432 2357999999999988877777664 34578999999865311 1
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
. +++|++|.|.-..
T Consensus 81 ~-g~id~lv~nAg~~ 94 (252)
T 3h7a_A 81 H-APLEVTIFNVGAN 94 (252)
T ss_dssp H-SCEEEEEECCCCC
T ss_pred h-CCceEEEECCCcC
Confidence 1 4799999996644
No 430
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=68.57 E-value=14 Score=34.86 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=54.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+++.++.+...+.. .+.++.++.+|+.+....
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA----DGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35678877765 55666665443 2357999999999988877776654 355688999999653210
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
..+++|++|.|.-.
T Consensus 83 ~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 83 EFGGIDYLVNNAAI 96 (253)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 01479999999754
No 431
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=68.47 E-value=10 Score=38.82 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=35.8
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHhcCCCc-EEEEEeCCHHHHHHHHH
Q psy2395 395 FEKKIKLLEMGTGS-GAIAIAIAIYSKNKI-EIIATDISKFALKIAKK 440 (570)
Q Consensus 395 ~~~~~~VLDlGcGt-G~i~l~la~~~~~~~-~V~gvDis~~al~~A~~ 440 (570)
..++.+||-+|||. |.+++.+|+.. ++ +|+++|.+++.++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHH
Confidence 35678999999875 78888888876 45 89999999999888853
No 432
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=68.29 E-value=16 Score=35.71 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=55.2
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
.+.+||=.|+++| ++..+++.+ ..+++|+.++.++..++.+...+.. .+.++.++.+|+.+....
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRG----QGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4567887787654 555555432 2257999999999988887776664 355789999999653210
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..+.+|++|.|.-+.
T Consensus 105 ~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 014799999997654
No 433
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.84 E-value=20 Score=34.19 Aligned_cols=79 Identities=9% Similarity=0.093 Sum_probs=53.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|++.| ++..+++.+ ..+++|+.+|.+++.++.+...+.. .+.++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD----TGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3567888887655 555444332 2257999999999988877776654 35578999999865311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
..++.|++|.|.-.
T Consensus 85 ~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 85 AYGRVDVVINNAFR 98 (264)
T ss_dssp HTSCCSEEEECCCS
T ss_pred HcCCCcEEEECCCC
Confidence 11579999999643
No 434
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=67.22 E-value=17 Score=34.70 Aligned_cols=125 Identities=12% Similarity=0.072 Sum_probs=67.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCH---HHHHHHHHHHHhhcccCCCCEEEEEcccccccc-------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISK---FALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~---~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~------- 465 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.++.+. +.++.+...+.. .+.++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGGIK-NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED----QGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT----TTCEEEEEECCCCSHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHH
Confidence 356788777655 4677666544 3467999987654 344444444442 34568999999865311
Q ss_pred --cCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEEE
Q psy2395 466 --NYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEH 532 (570)
Q Consensus 466 --~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~~ 532 (570)
..-++.|++|.|.-............+ .++. .+ .-.+.....+.+.+...++++|.+++..
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~-~~~~---~~--~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEA-EFDA---MD--TINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHH-HHHH---HH--HHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHH-HHHH---HH--HHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 001579999999654432211100000 0000 00 0001112346666777778888887653
No 435
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=66.25 E-value=29 Score=32.47 Aligned_cols=79 Identities=15% Similarity=0.100 Sum_probs=53.6
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|+ +|.++..+++.+ ..+++|++++.++..++.....+.. .+.++.++.+|+.+... ..
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE----KGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 456776664 555666665433 2357999999999888877766654 35578999999865311 11
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
.+++|++|.|.-+.
T Consensus 80 ~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 80 NLAIDILVNNAGIT 93 (247)
T ss_dssp TCCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 24789999997654
No 436
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=66.05 E-value=20 Score=34.44 Aligned_cols=124 Identities=12% Similarity=0.061 Sum_probs=66.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC-HHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS-KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis-~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.++.+ ...++.....+.. .+.++.++.+|+.+....
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ----AGGRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4567888887654 555555432 235789988665 4555555444443 355788999998653210
Q ss_pred -CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE
Q psy2395 467 -YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~ 531 (570)
..++.|++|.|.-+...........+ .++- .+.. .+.....+++.+...++++|.+++.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~-~~~~--~~~v---N~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVA-DFDE--VMAV---NFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHH-HHHH--HHHH---HTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHH-HHHH--HHHH---HhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 01479999999754432211000000 0000 0000 0111234566667778888888765
No 437
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=65.88 E-value=64 Score=32.13 Aligned_cols=44 Identities=20% Similarity=0.118 Sum_probs=32.0
Q ss_pred CCEEEEECCcccHHHH--HHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy2395 398 KIKLLEMGTGSGAIAI--AIAIYSKNKIEIIATDISKFALKIAKKNAKK 444 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l--~la~~~~~~~~V~gvDis~~al~~A~~n~~~ 444 (570)
..+|.=||+|+=.-++ .+|.. +..|+.+|+++++++.+..++..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~---G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG---GFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHH
Confidence 4579999998644433 33433 57899999999999988877654
No 438
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=65.65 E-value=15 Score=35.69 Aligned_cols=81 Identities=16% Similarity=0.069 Sum_probs=54.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc-cc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN-LQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~-l~--------- 465 (570)
.+.+||=.|++ |.++..+++.+ ..+++|++++.++..++.+...+... .+.++.++.+|+.+. ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 35567766655 55666666543 23579999999998887776666542 234699999999764 10
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
...+++|++|.|.-..
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 0014799999997543
No 439
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=65.46 E-value=14 Score=35.43 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=48.3
Q ss_pred CCEEEEECCc-ccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 398 KIKLLEMGTG-SGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 398 ~~~VLDlGcG-tG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+.++|=.|++ +|.++..+++.+ ..+++|+.++.++. .+.....+... .+ .+.++.+|+.+... .
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE---LN-SPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH---TT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh---cC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678888875 366777776543 33689999999886 22222222221 12 36788899865311 0
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..+++|++|.|.-+.
T Consensus 81 ~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFA 95 (275)
T ss_dssp HTSCEEEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 014799999997543
No 440
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=64.78 E-value=20 Score=34.00 Aligned_cols=81 Identities=12% Similarity=0.080 Sum_probs=52.9
Q ss_pred CCCEEEEECC-cccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGT-GSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGc-GtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|+ |+| ++..+++.+ ..+++|+.+|.++..++.+...+... ...++.++.+|+.+....
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 3567777776 454 444443322 22579999999999888777766542 235799999999653110
Q ss_pred -CCCceeEEEECCCCC
Q psy2395 467 -YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy~ 481 (570)
..+++|++|.|.-+.
T Consensus 97 ~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCcEEEECCCcC
Confidence 014789999997654
No 441
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=64.77 E-value=10 Score=38.64 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=41.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccccCCCceeEEE
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIV 475 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Iv 475 (570)
++.+|+=+|+ |.++..+++.. ..+++|+++|.++..++.+.... +..+.....+.. .+...-..+|+|+
T Consensus 165 ~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-------g~~~~~~~~~~~-~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-------GGRVITLTATEA-NIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-------TTSEEEEECCHH-HHHHHHHHCSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-------CceEEEecCCHH-HHHHHHhCCCEEE
Confidence 3578999998 45555444321 11579999999998877665322 222322222211 1111013689999
Q ss_pred ECCCC
Q psy2395 476 ANPPY 480 (570)
Q Consensus 476 ~NPPy 480 (570)
.+.|.
T Consensus 235 ~~~g~ 239 (369)
T 2eez_A 235 GAVLV 239 (369)
T ss_dssp ECCC-
T ss_pred ECCCC
Confidence 98664
No 442
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=64.23 E-value=30 Score=32.61 Aligned_cols=80 Identities=9% Similarity=0.051 Sum_probs=51.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccc--cccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNW--YNNL--------- 464 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~--~~~l--------- 464 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+++.++.+...+... ...++.++..|+ .+..
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE---TGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---HSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---cCCCceEEEEecccCCHHHHHHHHHHH
Confidence 35677777755 55666655433 23579999999998887776665542 233578888998 3321
Q ss_pred ccCCCceeEEEECCCC
Q psy2395 465 QNYKKLFNIIVANPPY 480 (570)
Q Consensus 465 ~~~~~~fD~Iv~NPPy 480 (570)
....+++|++|.|.-.
T Consensus 87 ~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHCSCCSEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 0111579999999654
No 443
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=63.92 E-value=10 Score=38.60 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=30.6
Q ss_pred CCCCEEEEEC-C-cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Q psy2395 396 EKKIKLLEMG-T-GSGAIAIAIAIYSKNKIEIIATDISKFALKIAK 439 (570)
Q Consensus 396 ~~~~~VLDlG-c-GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~ 439 (570)
.++.+||=.| + |.|..++.+|+.. +++|++++ +++.++.++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~ 224 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR 224 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH
Confidence 4678999998 3 3677788888775 57999999 676666653
No 444
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=63.89 E-value=15 Score=34.97 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=54.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.+||=.|+ +|.++..+++.+ ..+++|+.++.++..++.+...+.. .+.++.++.+|+.+... .
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA----AGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH----hCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 3557777775 456776666543 2357999999999988877776664 34568999999865321 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
..++.|++|.|...
T Consensus 103 ~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 103 AHGRCDVLVNNAGV 116 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 01479999999764
No 445
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=63.78 E-value=20 Score=34.35 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc----------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------- 465 (570)
.+.++|=.|+ +|.++..+++.+ ..+++|+.++.++..++.+...+.. .+.++.++.+|+.+...
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE----KGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3567887775 555666665433 2257999999999877766555543 24468899999865311
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
...+.+|++|.|....
T Consensus 95 ~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVV 110 (273)
T ss_dssp HTTSCCCEEEECCCCC
T ss_pred HcCCCCcEEEECCCCC
Confidence 1115799999996543
No 446
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=63.16 E-value=14 Score=37.57 Aligned_cols=43 Identities=21% Similarity=0.158 Sum_probs=30.0
Q ss_pred CCEEEEECCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Q psy2395 398 KIKLLEMGTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA 442 (570)
Q Consensus 398 ~~~VLDlGcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~ 442 (570)
+.+|+=+|+| .|..+..+++.. +++|+++|.+++.++.++...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLF 210 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhh
Confidence 4799999985 233333444444 469999999999888776543
No 447
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=63.14 E-value=29 Score=33.36 Aligned_cols=79 Identities=11% Similarity=0.023 Sum_probs=53.3
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|+++ .++..+++.+ ..+++|++++.++..++.+...+.. .+.++.++.+|+.+... ..
T Consensus 24 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 24 PQTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA----AGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp -CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56788778654 4655555433 2257999999999888877766654 35578999999865311 00
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
-++.|++|.|.-..
T Consensus 99 ~g~id~lv~nAg~~ 112 (279)
T 3sju_A 99 FGPIGILVNSAGRN 112 (279)
T ss_dssp HCSCCEEEECCCCC
T ss_pred cCCCcEEEECCCCC
Confidence 14789999996544
No 448
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=62.96 E-value=13 Score=34.45 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=42.6
Q ss_pred EEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccC-CCceeEEE
Q psy2395 400 KLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNY-KKLFNIIV 475 (570)
Q Consensus 400 ~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~-~~~fD~Iv 475 (570)
+|+=+| .|.++..+++.. ..+..|+.+|.+++.++..... . .+.++.+|..+.. ... -..+|+|+
T Consensus 2 ~iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~--~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------L--KATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------S--SSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------c--CCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 345555 477777776543 1256899999999987654322 1 2568899986531 111 14689998
Q ss_pred EC
Q psy2395 476 AN 477 (570)
Q Consensus 476 ~N 477 (570)
+-
T Consensus 71 ~~ 72 (218)
T 3l4b_C 71 IL 72 (218)
T ss_dssp EC
T ss_pred Ee
Confidence 84
No 449
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=62.86 E-value=18 Score=35.03 Aligned_cols=79 Identities=18% Similarity=0.109 Sum_probs=53.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.+|.+++.++.+...+.. .+.++.++.+|+.+... .
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGS-GIGRATALALAADGVTVGALGRTRTEVEEVADEIVG----AGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 356778777655 4666555433 2357999999999888777666653 34578999999965311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
.-+++|++|.|.-+
T Consensus 102 ~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 102 KFGHLDIVVANAGI 115 (283)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01479999999654
No 450
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=62.82 E-value=20 Score=33.98 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=52.0
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc----------c
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ----------N 466 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~----------~ 466 (570)
+.++|=.|+ +|.++..+++.+ ..+++|++++.++..++.+...+.. .+.++.++.+|+.+... .
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----KGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 557777775 555666665433 2257999999999887766555543 24468899999865311 1
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..+.+|++|.|.-..
T Consensus 84 ~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 84 FHGKLNILVNNAGIV 98 (260)
T ss_dssp TTTCCCEEEECCCCC
T ss_pred cCCCCCEEEECCCCC
Confidence 115799999996543
No 451
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=62.78 E-value=12 Score=35.89 Aligned_cols=77 Identities=12% Similarity=0.175 Sum_probs=48.6
Q ss_pred CCEEEEECC-cccHHHHHHHHhc-CCCcEEEEEeCCHHH-HHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 398 KIKLLEMGT-GSGAIAIAIAIYS-KNKIEIIATDISKFA-LKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 398 ~~~VLDlGc-GtG~i~l~la~~~-~~~~~V~gvDis~~a-l~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
+.++|=.|+ |+|.++..+++.+ ..+++|+.+|.++.. ++... .. .+.++.++.+|+.+....
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DR----LPAKAPLLELDVQNEEHLASLAGRVT 79 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TT----SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---Hh----cCCCceEEEccCCCHHHHHHHHHHHH
Confidence 567888888 4777877777543 235799999998754 22221 11 233577889998653110
Q ss_pred -CCC---ceeEEEECCCCC
Q psy2395 467 -YKK---LFNIIVANPPYI 481 (570)
Q Consensus 467 -~~~---~fD~Iv~NPPy~ 481 (570)
.-+ ++|++|.|.-..
T Consensus 80 ~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 80 EAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp HHHCTTCCEEEEEECCCCC
T ss_pred HHhCCCCCceEEEECCccC
Confidence 013 799999996543
No 452
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=62.70 E-value=7.3 Score=39.61 Aligned_cols=72 Identities=25% Similarity=0.371 Sum_probs=45.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccCCCceeE
Q psy2395 396 EKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNYKKLFNI 473 (570)
Q Consensus 396 ~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~~~~fD~ 473 (570)
.+..+|+=+|| |.++..+++.......|+..|++...++.++.+ +..+..|+.+. +...-..+|+
T Consensus 14 g~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 14 GRHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF-----------ATPLKVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp --CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT-----------SEEEECCTTCHHHHHHHHTTCSE
T ss_pred CCccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc-----------CCcEEEecCCHHHHHHHHhCCCE
Confidence 35678999998 666666665554467899999998877655322 34456676442 1111146899
Q ss_pred EEEC-CCC
Q psy2395 474 IVAN-PPY 480 (570)
Q Consensus 474 Iv~N-PPy 480 (570)
||+- |||
T Consensus 81 Vi~~~p~~ 88 (365)
T 3abi_A 81 VIGALPGF 88 (365)
T ss_dssp EEECCCGG
T ss_pred EEEecCCc
Confidence 9987 554
No 453
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=62.67 E-value=7.3 Score=41.19 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=46.8
Q ss_pred CCEEEEECCcccHHHHHHHHhcC-CCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccC-CCceeE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSK-NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNY-KKLFNI 473 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~-~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~-~~~fD~ 473 (570)
.++|+=+|| |.++..+|+... .+..|+.+|.+++.++.+...+ .+.+++||..+.. ... -...|+
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------DLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------SCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------CcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 345665555 677777887652 3678999999999988765443 2678999987642 211 157898
Q ss_pred EEE
Q psy2395 474 IVA 476 (570)
Q Consensus 474 Iv~ 476 (570)
+++
T Consensus 72 ~ia 74 (461)
T 4g65_A 72 LVA 74 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 454
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=62.56 E-value=24 Score=36.15 Aligned_cols=130 Identities=13% Similarity=0.154 Sum_probs=77.0
Q ss_pred eecCCcc-ccchhHHHHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccC
Q psy2395 371 NITSDVL-IPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKY 449 (570)
Q Consensus 371 ~v~~~~~-~pr~~t~~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~ 449 (570)
++.|++- .|.|..++|++.+ ...+.+||.++-+-|.+++.++ + ..+++.+.-|.-+... +..|
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~~----~~~~~~~l~~n~~~g~~~~~~~---~-~~~~~~~~~~~~~~~~----l~~~---- 85 (381)
T 3dmg_A 22 FIKPGARGYRDPVHDLLQKTV----EPFGERALDLNPGVGWGSLPLE---G-RMAVERLETSRAAFRC----LTAS---- 85 (381)
T ss_dssp EECTTCSSSSCHHHHHHHTTC----CCCSSEEEESSCTTSTTTGGGB---T-TBEEEEEECBHHHHHH----HHHT----
T ss_pred eecCCCCCCCChHHHHHHHHH----HHhCCcEEEecCCCCccccccC---C-CCceEEEeCcHHHHHH----HHHc----
Confidence 3555543 2446666655544 3345799999999999887775 3 3577777544444333 4433
Q ss_pred CCCEEEEEcccccccccCCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEE
Q psy2395 450 NIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLL 529 (570)
Q Consensus 450 ~~~v~~~~~D~~~~l~~~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~ 529 (570)
+..+.+ . .........||+|+.-.|=. .++...+..+..+...|+|||.++
T Consensus 86 ~~~~~~--~---~~~~~~~~~~d~v~~~~Pk~------------------------k~~~~~~~~l~~~~~~l~~g~~i~ 136 (381)
T 3dmg_A 86 GLQARL--A---LPWEAAAGAYDLVVLALPAG------------------------RGTAYVQASLVAAARALRMGGRLY 136 (381)
T ss_dssp TCCCEE--C---CGGGSCTTCEEEEEEECCGG------------------------GCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCccc--c---CCccCCcCCCCEEEEECCcc------------------------hhHHHHHHHHHHHHHhCCCCCEEE
Confidence 323322 1 11222346899999844310 123456788888999999999998
Q ss_pred EEEc-CCCHHHHHHHHH
Q psy2395 530 IEHG-YNQSNLVRKLLF 545 (570)
Q Consensus 530 ~~~~-~~~~~~l~~ll~ 545 (570)
+.-. ..-.+.+.+.+.
T Consensus 137 ~~g~~~~g~~~~~~~~~ 153 (381)
T 3dmg_A 137 LAGDKNKGFERYFKEAR 153 (381)
T ss_dssp EEEEGGGTHHHHHHHHH
T ss_pred EEEccHHHHHHHHHHHH
Confidence 7542 334455555554
No 455
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=62.38 E-value=5.9 Score=38.39 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=43.8
Q ss_pred cccCCCceeEEEEC--CCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE-EEcCC--CHH
Q psy2395 464 LQNYKKLFNIIVAN--PPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI-EHGYN--QSN 538 (570)
Q Consensus 464 l~~~~~~fD~Iv~N--PPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~-~~~~~--~~~ 538 (570)
++..-++||+|+.| -||.... |.. -+|..-.+..+-..+..+|+|||.+++ ..|+. ..+
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HH----------YQQ------CeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE 268 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHH----------YQQ------CVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSE 268 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSH----------HHH------HHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHH
T ss_pred CCCcCCceeEEEEecCCccccch----------HHH------HHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchH
Confidence 34333799999999 4553210 000 011112345566778899999999977 34543 345
Q ss_pred HHHHHHHHCCCeeEEEEec
Q psy2395 539 LVRKLLFKYGFSDIKSWRD 557 (570)
Q Consensus 539 ~l~~ll~~~Gf~~i~~~~D 557 (570)
.+...+.+ .|..+++.+-
T Consensus 269 ~vV~alAR-kF~~~rv~~P 286 (324)
T 3trk_A 269 RVICVLGR-KFRSSRALKP 286 (324)
T ss_dssp HHHHHHHT-TEEEEEEECC
T ss_pred HHHHHHHh-hheeeeeecC
Confidence 55555543 5776665543
No 456
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=62.22 E-value=35 Score=32.57 Aligned_cols=80 Identities=19% Similarity=0.120 Sum_probs=53.8
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.+||=.|+ +|.++..+++.+ ..+++|+++|.++..++.....+.. .+.++.++.+|+.+... .
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG----LGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh----cCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3557777775 566777766543 2257999999999887766665553 34568999999865311 0
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..+.+|++|.|..+.
T Consensus 105 ~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 105 EIGDVSILVNNAGVV 119 (272)
T ss_dssp HTCCCSEEEECCCCC
T ss_pred HCCCCcEEEECCCcC
Confidence 014799999997544
No 457
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=62.08 E-value=15 Score=38.33 Aligned_cols=124 Identities=11% Similarity=0.204 Sum_probs=65.7
Q ss_pred CEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH--------HhhcccCCCCEEEEEcccccccccCCCc
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNA--------KKKLTKYNIPIKFIKSNWYNNLQNYKKL 470 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~--------~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 470 (570)
.+|.=+|+ |+++..+|..+..+.+|+++|++++.++..++.. .........++.+ ..|..+.+ ..
T Consensus 37 mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~----~~ 109 (432)
T 3pid_A 37 MKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAY----RN 109 (432)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH----TT
T ss_pred CEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHH----hC
Confidence 46777766 5555555433322579999999999888765421 0000000112222 23332222 35
Q ss_pred eeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEEE--EcCCCHHHHHHHHHHC
Q psy2395 471 FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE--HGYNQSNLVRKLLFKY 547 (570)
Q Consensus 471 fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~~--~~~~~~~~l~~ll~~~ 547 (570)
.|+|+..-|-..... ++.-.+..+...++.+.. |+||..++.. ++....+.+.+.+.+.
T Consensus 110 aDvViiaVPt~~~~~-----------------~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 110 ADYVIIATPTDYDPK-----------------TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp CSEEEECCCCEEETT-----------------TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred CCEEEEeCCCccccc-----------------cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 799888644210000 000113456677778888 8888777653 3445566676666543
No 458
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=61.78 E-value=13 Score=37.91 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=29.1
Q ss_pred CCCEEEEECCcccHHHHHHH---HhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 397 KKIKLLEMGTGSGAIAIAIA---IYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la---~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
++.+|+=+|+| .++..++ +.. +++|+++|.++..++.+++
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGM--GATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHH
Confidence 46799999985 4544443 333 5699999999998877654
No 459
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.69 E-value=28 Score=33.42 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=52.9
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|++ |.++..+++.+ ..+++|+.++.+++.++.+...+.. .+.++.++.+|+.+... ..
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD----AGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4467766655 45666655433 2357999999999988877766654 34568899999865311 00
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
-++.|++|.|.-+.
T Consensus 79 ~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 79 WGRIDVLVNNAGVM 92 (264)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14799999997554
No 460
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=61.53 E-value=20 Score=34.57 Aligned_cols=80 Identities=15% Similarity=0.100 Sum_probs=54.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+++.+|=-|+++| ++..+++.+ ..+++|+.+|.+++.++.+.+.+.. .+.++.++.+|+.+... .
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR----KGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3556666665554 555555433 2358999999999998887777665 35578899999865311 1
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
.-++.|++|.|.-..
T Consensus 83 ~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 83 EGIHVDILINNAGIQ 97 (255)
T ss_dssp TTCCCCEEEECCCCC
T ss_pred HCCCCcEEEECCCCC
Confidence 126899999996543
No 461
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=61.44 E-value=16 Score=34.74 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=47.6
Q ss_pred CCEEEEECCc-ccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---C-----
Q psy2395 398 KIKLLEMGTG-SGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---Y----- 467 (570)
Q Consensus 398 ~~~VLDlGcG-tG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~----- 467 (570)
+.++|=.|++ +|.++..+++.+ ..+++|+.++.++..-+.+...... .+ .+.++.+|+.+.... .
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA----LG-GALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHH----TT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence 5678888886 366766666433 1247899999988622222222221 12 367889998653110 0
Q ss_pred -CCceeEEEECCCCC
Q psy2395 468 -KKLFNIIVANPPYI 481 (570)
Q Consensus 468 -~~~fD~Iv~NPPy~ 481 (570)
-+++|++|.|.-+.
T Consensus 83 ~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHSSEEEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 14799999997543
No 462
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=61.17 E-value=9.9 Score=38.61 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=33.0
Q ss_pred CCCCEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 396 EKKIKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 396 ~~~~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.++.+||=+|+ |.|.+++.+|+.. +++|+++. +++-++.+++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~ 206 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS 206 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH
Confidence 46789999998 3788888999876 57999985 8887776653
No 463
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=61.13 E-value=54 Score=33.29 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhh---------hhhHHHHHHHHHHHHHHHHHHHHhhCC-h
Q psy2395 3 HLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSF---------LYPIVELYNNYKKINEDIITAKEMLND-L 72 (570)
Q Consensus 3 ~~~~~~l~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~---------L~~~v~~~~~~~~~~~d~~~~~~l~~D-~ 72 (570)
..+...++.+..++..+...+.=+.+ .+++.++.++++. .+.+...+..++...+.+.++...++| .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~~---~~r~~el~~~~~~p~~w~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~d~~ 81 (365)
T 1gqe_A 5 NPVNNRIQDLTERSDVLRGYLDYDAK---KERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVS 81 (365)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTHHHH---HHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667888888888877766542221 2344444444432 223333444444444444444444433 3
Q ss_pred hHHHHHHHH----H-HHHHHHHHHHHHHHHHh
Q psy2395 73 EMRNFALDE----I-NLAKKRIFDIELEIKKL 99 (570)
Q Consensus 73 ~~~~~a~~e----~-~~~~~~~~~~~~~l~~~ 99 (570)
++.+++.+| + +.+..++..+++++..+
T Consensus 82 ~~~el~~~e~D~e~~~~a~~e~~~l~~~l~~l 113 (365)
T 1gqe_A 82 GLLELAVEADDEETFNEAVAELDALEEKLAQL 113 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455555433 2 34566677777666543
No 464
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=61.13 E-value=23 Score=33.65 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=51.6
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|++ |.++..+++.+ ..+++|+.++.+++.++.+...+.. .+.++.++.+|+.+... ..
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 7 GKVCLVTGAG-GNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE----KGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4577777765 45666665433 2357999999999887766655543 34468899999865311 00
Q ss_pred CCceeEEEECCCC
Q psy2395 468 KKLFNIIVANPPY 480 (570)
Q Consensus 468 ~~~fD~Iv~NPPy 480 (570)
-+.+|++|.|.-.
T Consensus 82 ~g~id~lv~nAg~ 94 (262)
T 1zem_A 82 FGKIDFLFNNAGY 94 (262)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 1478999999654
No 465
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=60.93 E-value=16 Score=35.12 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=48.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEe-CCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATD-ISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvD-is~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.++ .++...+.....+.. .+.++.++.+|+.+...
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA----AGGKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3567887776655 555544332 1246888774 455566555555543 35568899999865311
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
..-++.|++|.|.-..
T Consensus 101 ~~~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIM 116 (267)
T ss_dssp HHHSCEEEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 0014799999997654
No 466
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=60.84 E-value=31 Score=32.35 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---C-----
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---Y----- 467 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~----- 467 (570)
.+.+||=.|+ +|.++..+++.+ ..+++|+++|.++..++.....+.. .+.++.++.+|+.+.... .
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM----EGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3567777775 566777666543 2357999999998877665555543 244689999998653210 0
Q ss_pred -CCceeEEEECCCCC
Q psy2395 468 -KKLFNIIVANPPYI 481 (570)
Q Consensus 468 -~~~fD~Iv~NPPy~ 481 (570)
.+++|++|.|..+.
T Consensus 87 ~~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 87 QEGRVDILVACAGIC 101 (260)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 13689999986543
No 467
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=60.48 E-value=15 Score=34.85 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=52.4
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|+ +|.++..+++.+ ..+++|+.+|.+++.++.+...+.. .+.++.++.+|+.+... ..
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ----FPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----STTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456666665 455666665443 2357999999999988877766653 34578999999965311 00
Q ss_pred CCceeEEEECCCC
Q psy2395 468 KKLFNIIVANPPY 480 (570)
Q Consensus 468 ~~~fD~Iv~NPPy 480 (570)
.++.|++|.|.-.
T Consensus 81 ~g~id~lv~nAg~ 93 (257)
T 3imf_A 81 FGRIDILINNAAG 93 (257)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999999653
No 468
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=60.30 E-value=26 Score=32.97 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=52.4
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------C
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---------Y 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---------~ 467 (570)
+.++|=.|++ |.++..+++.+ ..+++|+.++.+++.++.+...+.. .+.++.++.+|+.+.... .
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA----AGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4577777755 55666665433 2257999999999887766655543 244688999998653110 0
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
-+.+|++|.|.-+.
T Consensus 82 ~g~id~lv~nAg~~ 95 (247)
T 2jah_A 82 LGGLDILVNNAGIM 95 (247)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14799999996543
No 469
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=60.25 E-value=25 Score=33.79 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=52.2
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cC
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NY 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~ 467 (570)
+.++|=.|++ |.++..+++.+ ..+++|++++.++..++.+...+.. .+.++.++.+|+.+... ..
T Consensus 22 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 22 SEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE----AGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp SCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578877764 55666665433 2257999999999887766555543 24468899999865311 00
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
-+.+|++|.|.-+.
T Consensus 97 ~g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 97 YGPVDVLVNNAGRP 110 (277)
T ss_dssp TCSCSEEEECCCCC
T ss_pred hCCCCEEEECCCCC
Confidence 14799999996543
No 470
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=59.42 E-value=26 Score=34.18 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=52.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC------------HHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS------------KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis------------~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|.+ ++.++.+...+.. .+.++.++.+|+.+.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA----LGRRIIASQVDVRDF 101 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh----cCCceEEEECCCCCH
Confidence 3567888887655 555555432 235899999987 6666665555553 355799999999653
Q ss_pred ccc---------CCCceeEEEECCCCC
Q psy2395 464 LQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 464 l~~---------~~~~fD~Iv~NPPy~ 481 (570)
... .-++.|++|.|.-+.
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 110 014799999996543
No 471
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=58.60 E-value=31 Score=33.99 Aligned_cols=82 Identities=10% Similarity=0.029 Sum_probs=54.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.+||=.|+++| ++..+++.+ ..+++|++++.++..++.+...+...+ .+.++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG--SGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3557888886654 566555433 235799999999998887777665421 22368999999865311 0
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..+.+|++|.|.-+.
T Consensus 84 ~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 84 RFGPVSILCNNAGVN 98 (319)
T ss_dssp HTCCEEEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 115789999996543
No 472
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=58.56 E-value=30 Score=32.28 Aligned_cols=66 Identities=6% Similarity=0.101 Sum_probs=44.7
Q ss_pred CCEEEEECCcccHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccC-CCceeE
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYSKN-KIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNY-KKLFNI 473 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~~~-~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~-~~~fD~ 473 (570)
..+|+=+|| |.++..+++.... +. |+++|.+++.++.++ . .+.++.+|..+. +... -...|+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~--------~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR---S--------GANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T--------TCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c--------CCeEEEcCCCCHHHHHhcCcchhcE
Confidence 457887776 6788888776532 45 999999998876554 1 267899998653 2111 246898
Q ss_pred EEEC
Q psy2395 474 IVAN 477 (570)
Q Consensus 474 Iv~N 477 (570)
|++-
T Consensus 75 vi~~ 78 (234)
T 2aef_A 75 VIVD 78 (234)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8884
No 473
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.45 E-value=27 Score=30.09 Aligned_cols=70 Identities=10% Similarity=0.031 Sum_probs=42.0
Q ss_pred CEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC-HHHHHHHHHHHHhhcccCCCCEEEEEccccccc--ccC-CCceeE
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS-KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL--QNY-KKLFNI 473 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis-~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l--~~~-~~~fD~ 473 (570)
.+|+=+|| |.++..+++.. ..+..|+.+|.+ ++.++....... ..+.++.+|..+.. ... -...|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-------CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 45666665 77777666543 124689999998 454444433221 23778999986531 111 257899
Q ss_pred EEEC
Q psy2395 474 IVAN 477 (570)
Q Consensus 474 Iv~N 477 (570)
|++-
T Consensus 75 vi~~ 78 (153)
T 1id1_A 75 ILAL 78 (153)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8884
No 474
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=58.34 E-value=29 Score=34.79 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=27.5
Q ss_pred CCC-CEEEEECC--cccHHHHHHHHhcCCCcEEEEEeCCHHH
Q psy2395 396 EKK-IKLLEMGT--GSGAIAIAIAIYSKNKIEIIATDISKFA 434 (570)
Q Consensus 396 ~~~-~~VLDlGc--GtG~i~l~la~~~~~~~~V~gvDis~~a 434 (570)
.++ .+||=.|+ |.|.+++.+|+.. +++++++.-++..
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPN 204 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTT
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccc
Confidence 456 89999886 4677888888876 5788888765543
No 475
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=58.33 E-value=45 Score=32.01 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=52.9
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------C
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---------Y 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---------~ 467 (570)
+.+||=.|+ +|.++..+++.+ ..+++|++++.++..++.+...+.. .+.++.++.+|+.+.... .
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS----FGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh----cCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 457777775 566777777654 3367999999888877666555543 345688999998653110 0
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
.+.+|++|.|..+.
T Consensus 119 ~~~id~li~~Ag~~ 132 (285)
T 2c07_A 119 HKNVDILVNNAGIT 132 (285)
T ss_dssp CSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14689999996544
No 476
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=58.08 E-value=24 Score=33.02 Aligned_cols=79 Identities=14% Similarity=0.038 Sum_probs=52.8
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---C------
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---Y------ 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---~------ 467 (570)
+.+||=.| |+|.++..+++.+ ..+++|+++|.++..++.....+.. .+.++.++.+|+.+.... .
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ----LGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH----hCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45676655 5677877777543 3367999999999877666555543 244688999998653110 0
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
.+.+|+||.|..+.
T Consensus 86 ~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 86 LGKVDILVNNAGGG 99 (255)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13799999986543
No 477
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=57.92 E-value=23 Score=32.21 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHhhhhhHHHH
Q psy2395 10 EKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVEL 51 (570)
Q Consensus 10 ~~~~~r~~~l~~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~ 51 (570)
+++.....+|..++..|++ |+.+++++.+|+++|+..+..
T Consensus 92 ~ql~akr~EL~aL~~a~~~--DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 92 QQLISKRYEYNALLTASSP--DTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp HHHHHHHHHHHHHHTSSSC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788888888887 999999988888887765543
No 478
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=57.67 E-value=34 Score=32.69 Aligned_cols=80 Identities=18% Similarity=0.084 Sum_probs=51.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC------------HHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS------------KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis------------~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+ ++.++.+...+.. .+.++.++.+|+.+.
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED----IGSRIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----HTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh----cCCeEEEEeCCCCCH
Confidence 35678877755 45655555433 235899999987 6666665555543 345799999999653
Q ss_pred ccc---------CCCceeEEEECCCCC
Q psy2395 464 LQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 464 l~~---------~~~~fD~Iv~NPPy~ 481 (570)
... .-++.|++|.|.-+.
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 110 014799999996543
No 479
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=57.50 E-value=32 Score=33.06 Aligned_cols=80 Identities=10% Similarity=-0.007 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+...++.+...+... .+.++.++.+|+.+... .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA---TGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35678877765 45666665543 33679999999988776665554321 24568999999865311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
.-+++|++|.|.-.
T Consensus 102 ~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 102 EFGRIDILINCAAG 115 (277)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCcC
Confidence 01479999999653
No 480
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=57.42 E-value=19 Score=34.77 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=53.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.++.+++.++.+...+.. .+.++.++.+|+.+....
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG----VGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45678777765 45655555433 2257999999999888777666654 345688999998653110
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
.-+++|++|.|.-..
T Consensus 106 ~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIV 120 (276)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 014799999996544
No 481
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=57.36 E-value=27 Score=33.57 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=48.4
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHH-HHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFA-LKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~a-l~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+.++|=.|+ +|.++..+++.+ ..+++|+.++.++.. .+.+...+.. .+.++.++.+|+.+... .
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH----hCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 456766665 556776666543 235799999988643 4443344433 34568899999865211 0
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
.-+.+|++|.|.-+.
T Consensus 104 ~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 014789999996543
No 482
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=57.27 E-value=46 Score=30.68 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=52.3
Q ss_pred CEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---cCC------
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---NYK------ 468 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---~~~------ 468 (570)
.++|=.|+ +|.++..+++.+ ..+++|+.++.+++.++.+...+... .+.++.++.+|+.+... ...
T Consensus 3 k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 3 KVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE---QGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---cCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 46676675 455666666543 23578999999998887766655421 35578999999865321 011
Q ss_pred CceeEEEECCCCC
Q psy2395 469 KLFNIIVANPPYI 481 (570)
Q Consensus 469 ~~fD~Iv~NPPy~ 481 (570)
+++|++|.|....
T Consensus 79 g~id~li~~Ag~~ 91 (235)
T 3l77_A 79 GDVDVVVANAGLG 91 (235)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999996543
No 483
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=57.26 E-value=26 Score=33.64 Aligned_cols=82 Identities=12% Similarity=0.044 Sum_probs=53.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+++.++.+...+...+ ....++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG-ANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-CSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35677777765 55665555432 235799999999998887777666421 112268899999865311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
..+++|++|.|.-.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 01478999998654
No 484
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=57.00 E-value=40 Score=36.19 Aligned_cols=80 Identities=9% Similarity=0.035 Sum_probs=56.1
Q ss_pred HHHHH-HHhcCccccCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHH
Q psy2395 16 LKELD-FLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFDIEL 94 (570)
Q Consensus 16 ~~~l~-~~l~~p~~w~d~~~~~~l~ke~~~L~~~v~~~~~~~~~~~d~~~~~~l~~D~~~~~~a~~e~~~~~~~~~~~~~ 94 (570)
.+.|+ .-+.+|+| +++.+++.++-.+.|-.+|.+...|....++...+.+-+ +.+++++..+++++.++.
T Consensus 137 ~~~l~~~y~~~p~F--~~e~v~~~S~Aa~~Lc~WV~A~~~Y~~l~~eV~pLk~eL------k~lE~eL~e~e~eL~~ll- 207 (536)
T 3err_A 137 REKMKKNYMSNPSY--NYEIVNRASLAAGPMVKWAIAQLNYADMLKRVEPLRNEL------QKLEDDAKDNQQKLEALL- 207 (536)
T ss_dssp HHHHHHHTTTSTTC--SHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhhhHHHH------HHHHHHHHHHHHHHHHHh-
Confidence 45665 46788999 999999999999999999999998887776666555433 334455555555555433
Q ss_pred HHHHhcCCCCcCCc
Q psy2395 95 EIKKLILPKDKNDK 108 (570)
Q Consensus 95 ~l~~~ll~~~~~d~ 108 (570)
..+|+-+.++
T Consensus 208 ----l~ipN~~~~~ 217 (536)
T 3err_A 208 ----LQVPLPPWPG 217 (536)
T ss_dssp ----TTCCCCCCTT
T ss_pred ----cCCCCCCCCC
Confidence 4577776665
No 485
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=56.79 E-value=34 Score=32.91 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=50.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeC-CHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc--------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDI-SKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN-------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDi-s~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~-------- 466 (570)
.+.++|=.|+++ .++..+++.+ ..+++|+.+|. +++.++.....+.. .+.++.++.+|+.+....
T Consensus 28 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG----LGARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH----TTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred CCCEEEEecCCC-HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 355777777654 4555555432 23579999996 77777666655554 355799999999653210
Q ss_pred -CCCceeEEEECCCC
Q psy2395 467 -YKKLFNIIVANPPY 480 (570)
Q Consensus 467 -~~~~fD~Iv~NPPy 480 (570)
.-++.|++|.|...
T Consensus 103 ~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 103 AEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHSCCCEEEEECC-
T ss_pred HHcCCCCEEEECCCc
Confidence 01479999999754
No 486
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=56.76 E-value=16 Score=35.25 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=49.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
+++.+|=-|+++| ++..+++.+ ..+++|+.+|.+.+..+.+..... .+.++.++.+|+.+... .
T Consensus 6 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 6 QDKVVIVTGGASG-IGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ-----RQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHH-----HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHh-----cCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 4667888887776 444433322 225799999998776555544333 24568889999865311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
.-++.|++|.|.-.
T Consensus 80 ~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 80 TFGRLDGLVNNAGV 93 (258)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01689999999643
No 487
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=56.54 E-value=51 Score=31.28 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=53.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|.+++.++.+...+... ..+.++.++.+|+.+... .
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQR--FPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3567777776655 555555432 22579999999999888777666541 023358899999865311 0
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
.-++.|++|.|..+.
T Consensus 84 ~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 84 TLGCASILVNNAGQG 98 (265)
T ss_dssp HHCSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 015789999997654
No 488
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=56.21 E-value=27 Score=33.25 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=51.9
Q ss_pred CCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------C
Q psy2395 398 KIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN---------Y 467 (570)
Q Consensus 398 ~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~---------~ 467 (570)
+.++|=.|++ |.++..+++.+ ..+++|+.++.+++.++.+...+... ..+.++.++.+|+.+.... .
T Consensus 13 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 13 DRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET--APDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--CTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5577777764 55666665433 22579999999998777665555431 0144688999998653110 0
Q ss_pred CCceeEEEECCCCC
Q psy2395 468 KKLFNIIVANPPYI 481 (570)
Q Consensus 468 ~~~fD~Iv~NPPy~ 481 (570)
.+++|++|.|.-+.
T Consensus 90 ~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 90 FGRIDGFFNNAGIE 103 (267)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 14689999996543
No 489
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=55.99 E-value=22 Score=33.93 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=53.4
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccccc---------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQN--------- 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~~--------- 466 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.++.++..++.+...+... .+.++.++.+|+.+....
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ---FGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---HCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35567766655 55666665443 23579999999998887776665431 245689999999653210
Q ss_pred CCCceeEEEECCCCC
Q psy2395 467 YKKLFNIIVANPPYI 481 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy~ 481 (570)
..++.|++|.|.-..
T Consensus 95 ~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 95 AFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHTSCSEEEEECCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 014799999996543
No 490
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=55.99 E-value=22 Score=31.67 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=68.7
Q ss_pred HHHHHHHhhcCCCCCEEEEECCcccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccccc
Q psy2395 385 LLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSKNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNL 464 (570)
Q Consensus 385 ~l~~~~~~~~~~~~~~VLDlGcGtG~i~l~la~~~~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l 464 (570)
..++++......-..-|||+|-|+|..--.|...+| +..|+.+|---.+ +-. .....-.++.||+.+.+
T Consensus 28 ~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~------hp~----~~P~~e~~ilGdi~~tL 96 (174)
T 3iht_A 28 ACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVAS------HPD----STPPEAQLILGDIRETL 96 (174)
T ss_dssp HHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCC------CGG----GCCCGGGEEESCHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeecc------CCC----CCCchHheecccHHHHH
Confidence 455666665555567899999999999999988887 6899999952110 000 01112457888887655
Q ss_pred cc----CCCceeEEEECCCCCCCCCcccCCCCccccccccccccCCChHHHHHHHHHHhhccccCeEEEE
Q psy2395 465 QN----YKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530 (570)
Q Consensus 465 ~~----~~~~fD~Iv~NPPy~~~~~~~~~~~~~~~ep~~al~~~~~gl~~~~~~l~~~~~~LkpgG~l~~ 530 (570)
+. +..+.-++-.+.-.... +....+...+-..+..+|.|||+++-
T Consensus 97 ~~~~~r~g~~a~LaHaD~G~g~~---------------------~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 97 PATLERFGATASLVHADLGGHNR---------------------EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHCSCEEEEEECCCCSCH---------------------HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEeecCCCCc---------------------chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 43 12344444443221100 01123344566677889999998874
No 491
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=55.96 E-value=62 Score=31.24 Aligned_cols=81 Identities=19% Similarity=0.162 Sum_probs=53.1
Q ss_pred CCCEEEEECCcccHHHHHHHHhc----CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc-------
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS----KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~----~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~------- 465 (570)
.+.++|=.|+++ .++..+++.+ ....+|+.++.+++.++.+...+.... .+.++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~-GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 32 AKKTVLITGASA-GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF--PNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC--TTCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCCEEEEecCCC-hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC--CCCeEEEEECCCCCHHHHHHHHHH
Confidence 356888888654 4555555432 112399999999998887776665421 24468899999865321
Q ss_pred --cCCCceeEEEECCCC
Q psy2395 466 --NYKKLFNIIVANPPY 480 (570)
Q Consensus 466 --~~~~~fD~Iv~NPPy 480 (570)
..-++.|++|.|.-.
T Consensus 109 ~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGK 125 (287)
T ss_dssp SCGGGCSCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 111479999999654
No 492
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=55.88 E-value=32 Score=33.02 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=52.3
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeC-------------CHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDI-------------SKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDi-------------s~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|. +++.++.+...+.. .+.++.++.+|+.+
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED----QGRKALTRVLDVRD 88 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT----TTCCEEEEECCTTC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEEcCCCC
Confidence 3567777776654 555555432 23579999998 67777766665553 35578999999865
Q ss_pred cccc---------CCCceeEEEECCCCC
Q psy2395 463 NLQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 463 ~l~~---------~~~~fD~Iv~NPPy~ 481 (570)
.... .-++.|++|.|.-..
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3110 014799999996544
No 493
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.43 E-value=61 Score=27.86 Aligned_cols=70 Identities=13% Similarity=0.158 Sum_probs=40.5
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccc--cccC-CCcee
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN--LQNY-KKLFN 472 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~--l~~~-~~~fD 472 (570)
++.+|+=+|| |.++..+++.. ..+.+|+++|.+++.++.++. ...+.++.+|..+. +... -..+|
T Consensus 18 ~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 18 KSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---------EFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---------TCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred CCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---------cCCCcEEEecCCCHHHHHHcCcccCC
Confidence 4678998887 55555544332 124689999999876543321 11245666775331 1111 14689
Q ss_pred EEEEC
Q psy2395 473 IIVAN 477 (570)
Q Consensus 473 ~Iv~N 477 (570)
+|+..
T Consensus 87 ~Vi~~ 91 (155)
T 2g1u_A 87 MVFAF 91 (155)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99884
No 494
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=55.29 E-value=38 Score=32.91 Aligned_cols=79 Identities=22% Similarity=0.112 Sum_probs=51.9
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------c
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------N 466 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~ 466 (570)
.+.++|=.|+ +|.++..+++.+ ..+++|+++|.++..++.+...+.. .+.++.++.+|+.+... .
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA----AGINAHGYVCDVTDEDGIQAMVAQIES 107 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567777775 456666666433 2357999999999877766555543 24468889999865311 0
Q ss_pred CCCceeEEEECCCC
Q psy2395 467 YKKLFNIIVANPPY 480 (570)
Q Consensus 467 ~~~~fD~Iv~NPPy 480 (570)
.-+.+|++|.|.-+
T Consensus 108 ~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 108 EVGIIDILVNNAGI 121 (291)
T ss_dssp HTCCCCEEEECCCC
T ss_pred HcCCCcEEEECCCc
Confidence 01469999998654
No 495
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=54.28 E-value=19 Score=33.05 Aligned_cols=69 Identities=10% Similarity=0.027 Sum_probs=47.0
Q ss_pred EEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEccccc-c--cccCCCceeEEE
Q psy2395 400 KLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN-N--LQNYKKLFNIIV 475 (570)
Q Consensus 400 ~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~-~--l~~~~~~fD~Iv 475 (570)
+||=.| |+|.++..+++.+ ..+.+|++++.++..+.. ..++.++.+|+.+ . +...-..+|+||
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi 68 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ------------YNNVKAVHFDVDWTPEEMAKQLHGMDAII 68 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC------------CTTEEEEECCTTSCHHHHHTTTTTCSEEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhh------------cCCceEEEecccCCHHHHHHHHcCCCEEE
Confidence 566556 5788888888655 336899999998753211 1358999999976 3 222225699999
Q ss_pred ECCCCC
Q psy2395 476 ANPPYI 481 (570)
Q Consensus 476 ~NPPy~ 481 (570)
.+....
T Consensus 69 ~~ag~~ 74 (219)
T 3dqp_A 69 NVSGSG 74 (219)
T ss_dssp ECCCCT
T ss_pred ECCcCC
Confidence 986544
No 496
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=54.13 E-value=29 Score=34.15 Aligned_cols=80 Identities=14% Similarity=0.049 Sum_probs=50.7
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCC------------HHHHHHHHHHHHhhcccCCCCEEEEEcccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDIS------------KFALKIAKKNAKKKLTKYNIPIKFIKSNWYNN 463 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis------------~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~ 463 (570)
.+.++|=.|++ |.++..+++.+ ..+++|+.+|.+ ++.++.+...+.. .+.++.++.+|+.+.
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE----QGRRIIARQADVRDL 119 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh----cCCeEEEEECCCCCH
Confidence 35567766655 44665555433 235799999986 6666655555543 355789999998653
Q ss_pred ccc---------CCCceeEEEECCCCC
Q psy2395 464 LQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 464 l~~---------~~~~fD~Iv~NPPy~ 481 (570)
... .-+++|++|.|.-+.
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 110 014799999996543
No 497
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=54.08 E-value=58 Score=31.07 Aligned_cols=80 Identities=23% Similarity=0.089 Sum_probs=51.6
Q ss_pred CCCEEEEECCcccHHHHHHHHhc-CCCcEEEEEeC-------------CHHHHHHHHHHHHhhcccCCCCEEEEEccccc
Q psy2395 397 KKIKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDI-------------SKFALKIAKKNAKKKLTKYNIPIKFIKSNWYN 462 (570)
Q Consensus 397 ~~~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDi-------------s~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~ 462 (570)
.+.++|=.|+++| ++..+++.+ ..+++|+.+|. ++..++.+...+.. .+.++.++.+|+.+
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~ 84 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----ANRRIVAAVVDTRD 84 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTTC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEECCCCC
Confidence 3567887776554 555555432 23579999998 66766666555543 35578999999865
Q ss_pred cccc---------CCCceeEEEECCCCC
Q psy2395 463 NLQN---------YKKLFNIIVANPPYI 481 (570)
Q Consensus 463 ~l~~---------~~~~fD~Iv~NPPy~ 481 (570)
.... .-++.|++|.|.-+.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3110 014799999996544
No 498
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=54.07 E-value=35 Score=32.82 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=47.9
Q ss_pred CCCEEEEECCcc-cHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------
Q psy2395 397 KKIKLLEMGTGS-GAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ--------- 465 (570)
Q Consensus 397 ~~~~VLDlGcGt-G~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~--------- 465 (570)
.+.++|=.|+++ |.++..+++.+ ..+++|+.++.++..-+.+. .+... .+ .+.++.+|+.+...
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~l~~~---~~-~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVR-EIAKG---FG-SDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHH---TT-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHh---cC-CeEEEEcCCCCHHHHHHHHHHHH
Confidence 356788888762 66777666543 22579999999885222222 22211 12 26788899865311
Q ss_pred cCCCceeEEEECCCCC
Q psy2395 466 NYKKLFNIIVANPPYI 481 (570)
Q Consensus 466 ~~~~~fD~Iv~NPPy~ 481 (570)
..-+++|++|.|..+.
T Consensus 95 ~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHTSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 0014789999997543
No 499
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=54.04 E-value=6.2 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=27.0
Q ss_pred CEEEEE-CCc-ccHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Q psy2395 399 IKLLEM-GTG-SGAIAIAIAIYSKNKIEIIATDISKFALKIAKK 440 (570)
Q Consensus 399 ~~VLDl-GcG-tG~i~l~la~~~~~~~~V~gvDis~~al~~A~~ 440 (570)
.+||=. |+| .|..++.+++.. +++|+++|.+++-++.+++
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 207 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD 207 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 455532 332 455566666665 5799999999998888864
No 500
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=53.85 E-value=37 Score=31.96 Aligned_cols=78 Identities=19% Similarity=0.137 Sum_probs=50.7
Q ss_pred CEEEEECCcccHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHHHHhhcccCCCCEEEEEcccccccc---------cCC
Q psy2395 399 IKLLEMGTGSGAIAIAIAIYS-KNKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQ---------NYK 468 (570)
Q Consensus 399 ~~VLDlGcGtG~i~l~la~~~-~~~~~V~gvDis~~al~~A~~n~~~~~~~~~~~v~~~~~D~~~~l~---------~~~ 468 (570)
.++|=.|+ +|.++..+++.+ ..+++|++++.++..++.+...+.. .+.++.++.+|+.+... ..-
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 3 KVALVTGA-GQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ----AGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45666665 455666666443 2257999999999877766555543 24468899999865311 001
Q ss_pred CceeEEEECCCCC
Q psy2395 469 KLFNIIVANPPYI 481 (570)
Q Consensus 469 ~~fD~Iv~NPPy~ 481 (570)
+.+|++|.|.-+.
T Consensus 78 g~id~lv~nAg~~ 90 (256)
T 1geg_A 78 GGFDVIVNNAGVA 90 (256)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4799999996543
Done!