Your job contains 1 sequence.
>psy2395
MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE
DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG
GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG
VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT
DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS
VQKKSPLNIFETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYII
GKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGAIAIAIAIYSK
NKIEIIATDISKFALKIAKKNAKKKLTKYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPY
IPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLV
RKLLFKYGFSDIKSWRDLSGIERVTQGKIS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2395
(570 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 849 8.0e-85 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 811 8.5e-81 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 795 4.2e-79 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 776 4.3e-77 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 776 4.3e-77 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 767 3.9e-76 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 759 2.7e-75 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 756 5.7e-75 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 727 6.7e-72 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 702 3.0e-69 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 700 4.9e-69 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 696 1.3e-68 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 680 6.5e-67 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 668 1.2e-65 1
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 665 2.5e-65 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 617 3.1e-60 1
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 615 5.0e-60 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 588 3.6e-57 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 571 2.3e-55 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 545 5.4e-55 2
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 564 1.3e-54 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 564 1.3e-54 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 560 3.4e-54 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 558 5.5e-54 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 555 1.1e-53 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 550 3.8e-53 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 550 3.8e-53 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 549 4.9e-53 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 548 6.3e-53 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 545 1.3e-52 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 544 1.7e-52 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 540 4.4e-52 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 536 1.2e-51 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 536 1.2e-51 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 529 6.5e-51 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 504 2.9e-48 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 500 7.7e-48 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 494 3.3e-47 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 478 1.6e-45 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 475 3.4e-45 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 465 3.9e-44 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 460 1.3e-43 1
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 457 2.8e-43 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 456 3.5e-43 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 445 5.2e-42 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 442 1.1e-41 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 441 1.4e-41 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 417 4.8e-39 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 399 3.9e-37 1
UNIPROTKB|Q83AD8 - symbol:prmC "Release factor glutamine ... 397 6.3e-37 1
TIGR_CMR|CBU_1964 - symbol:CBU_1964 "protein methyltransf... 397 6.3e-37 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 397 6.3e-37 1
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 396 8.0e-37 1
TIGR_CMR|CPS_3551 - symbol:CPS_3551 "modification methyla... 394 1.3e-36 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 391 2.7e-36 1
UNIPROTKB|P0ACC1 - symbol:prmC "protein-(glutamine-N5) me... 389 4.4e-36 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 387 7.2e-36 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 387 7.2e-36 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 384 1.5e-35 1
TIGR_CMR|VC_2178 - symbol:VC_2178 "hemK protein" species:... 381 3.1e-35 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 377 8.3e-35 1
UNIPROTKB|Q8EAR4 - symbol:prmC "Release factor glutamine ... 375 1.5e-34 1
TIGR_CMR|SO_3832 - symbol:SO_3832 "hemK family protein" s... 375 1.5e-34 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 374 2.0e-34 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 351 9.8e-32 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 351 9.8e-32 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 307 3.2e-25 1
TIGR_CMR|GSU_3103 - symbol:GSU_3103 "modification methyla... 291 4.8e-25 1
TIGR_CMR|DET_1211 - symbol:DET_1211 "modification methyla... 274 3.5e-23 1
TIGR_CMR|SPO_2460 - symbol:SPO_2460 "modification methyla... 266 2.6e-22 1
TIGR_CMR|NSE_0128 - symbol:NSE_0128 "modification methyla... 244 6.6e-20 1
TIGR_CMR|BA_5571 - symbol:BA_5571 "modification methylase... 233 1.0e-18 1
TAIR|locus:2164396 - symbol:AT5G64150 species:3702 "Arabi... 247 1.3e-18 1
TIGR_CMR|ECH_1063 - symbol:ECH_1063 "modification methyla... 227 4.6e-18 1
TIGR_CMR|CHY_2562 - symbol:CHY_2562 "modification methyla... 172 4.3e-17 2
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 147 3.5e-16 2
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 147 3.5e-16 2
DICTYBASE|DDB_G0278505 - symbol:DDB_G0278505 "HemK family... 151 1.2e-15 2
TIGR_CMR|CJE_0822 - symbol:CJE_0822 "modification methyla... 195 8.1e-14 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 180 5.6e-13 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 180 5.6e-13 1
TIGR_CMR|APH_1200 - symbol:APH_1200 "modification methyla... 192 6.0e-13 1
UNIPROTKB|Q9KQ83 - symbol:prmB "50S ribosomal protein L3 ... 188 4.5e-12 1
TIGR_CMR|VC_2118 - symbol:VC_2118 "adenine-specific methy... 188 4.5e-12 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 170 6.7e-12 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 170 6.7e-12 1
UNIPROTKB|Q8ECQ4 - symbol:prmB "50S ribosomal protein L3 ... 185 8.7e-12 1
TIGR_CMR|SO_3080 - symbol:SO_3080 "hemK family protein" s... 185 8.7e-12 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 178 1.4e-11 1
UNIPROTKB|P39199 - symbol:prmB "protein-glutamine N-methy... 180 3.7e-11 1
UNIPROTKB|B0B9D1 - symbol:prmC "Release factor glutamine ... 169 5.2e-10 1
FB|FBgn0031817 - symbol:CG9531 species:7227 "Drosophila m... 166 1.8e-09 1
UNIPROTKB|Q10602 - symbol:prmC "Release factor glutamine ... 165 1.9e-09 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 146 2.6e-09 1
MGI|MGI:1916786 - symbol:Hemk1 "HemK methyltransferase fa... 165 2.7e-09 1
RGD|1308293 - symbol:Hemk1 "HemK methyltransferase family... 163 4.6e-09 1
ZFIN|ZDB-GENE-050208-185 - symbol:hemk1 "HemK methyltrans... 162 6.0e-09 1
POMBASE|SPBC1105.18c - symbol:SPBC1105.18c "peptide relea... 142 7.0e-09 1
UNIPROTKB|Q9Y5R4 - symbol:HEMK1 "HemK methyltransferase f... 155 3.5e-08 1
UNIPROTKB|E1BTM2 - symbol:HEMK1 "Uncharacterized protein"... 152 8.2e-08 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 168/306 (54%), Positives = 223/306 (72%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M K+E+ R EL+ LL V N ++ + REH+ L P++E Y YKK+ E++
Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
+E+L D EM+ A E+ ++R ++E EIK L+LP+D ND RN+ +EIRAGTGGDES
Sbjct: 61 NRELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDES 120
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
ALF DL RMY RF+ERN WK E++S S SE GG+KEI+A I G V++KLK+ESG HRV
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRV 180
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
QRVP+TE QGRIHTSACTVAV+PEA++IE ++INPADL+ID YRASGAGGQH+NKT+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLPEAEDIE-VDINPADLKIDVYRASGAGGQHVNKTESAV 239
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKK 304
RITHIPTGIVV+CQ++RSQ KN+A A+K+L +I D +EQ + A R+ +GS +
Sbjct: 240 RITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSGDRS 299
Query: 305 SPLNIF 310
+ +
Sbjct: 300 ERIRTY 305
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 162/300 (54%), Positives = 221/300 (73%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +++KLE +R +E+ LL + + + + RE++ L + + +++++ E
Sbjct: 1 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE 60
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
DI TA+ ML+D EMR A DE+ AK++ +E +++ L+LPKD +D+RN F+E+RAGTG
Sbjct: 61 DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG 120
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+ALF DL RMY R++E W+ EI+S S E GGYKEIIA+I G VY +LKFESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG 180
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
HRVQRVP TE+QGRIHTSACTVAV+PE + E +INPADLRIDT+R+SGAGGQH+N T
Sbjct: 181 GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT 240
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
DSA+RITH+PTGIVV+CQ++RSQHKNKA AL +L ARI +++ ++Q A RR L+GS
Sbjct: 241 DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS 300
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 153/312 (49%), Positives = 223/312 (71%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KL+ + R E+ LL+ V N+ Y + +E++ L PIV+ + +++ +
Sbjct: 1 MKPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK 60
Query: 61 DIITAKEMLN--DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
I +A+EM D E+R A +E+ + ++E ++K L++PKD ND+RN+F+EIRAG
Sbjct: 61 AIESAEEMQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
TGG+E+A+F DL RMY R++E W+ I+S E GG+KE+IAR+IG VYS+LKFE
Sbjct: 121 TGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGRIHTSACTVA++PE DEI+ I INPA+LRIDT+RASGAGGQH+N
Sbjct: 181 SGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
+TDSA+RITH+PTG+VV+CQ++RSQHKNKA A+ +L +++ ++ +Q A R+ L+
Sbjct: 241 RTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLV 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSERIRTY 312
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 157/312 (50%), Positives = 212/312 (67%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 157/312 (50%), Positives = 212/312 (67%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK +LSKLE +R +E+ LL V + + +E+S L I + + Y++ E
Sbjct: 1 MKASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKE 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D++ A+EM +D EMR A DEI AK I + E++ L+LPKD ND RN F+EIRAG
Sbjct: 61 DLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ +F DL RMY RF+E+ W+ E++S S +E GGYKE+IA++ G Y LKFE
Sbjct: 121 AGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE QGRIHTSACTVAV+PE E E I +DL+IDT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSA+RITH+PTGIVV+CQ++RSQHKNKA A+ +L ARI ++ ++ + + RR L+
Sbjct: 241 TTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLL 300
Query: 299 GSVQKKSPLNIF 310
GS + + +
Sbjct: 301 GSGDRSDRIRTY 312
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 149/312 (47%), Positives = 212/312 (67%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK + KLE +R +E+ LL+ ++ + + +E L + ++NNYK +
Sbjct: 1 MKSSVYQKLEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAED 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D TA+ ML +D +MR A +E AKK + DI E++ L+LP+D ND N F+EIRAG
Sbjct: 61 DFSTAELMLKDDDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E+ WK E+++ + SE GGYKE+I ++ G V+ +KFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP TE+QGR+HTSACTV V+PE E + I IN ADL++DT+RASGAGGQH+N
Sbjct: 181 SGGHRVQRVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTG+VV+CQ RSQHKN+A A+ +L AR++ ++ +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLV 300
Query: 299 GSVQKKSPLNIF 310
S + + +
Sbjct: 301 ASGDRSERIRTY 312
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 156/302 (51%), Positives = 210/302 (69%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
MK ++ KLE +R +E+ LL V + + +E+S L +V + Y++
Sbjct: 1 MKESVIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQA 60
Query: 61 DIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
D+ +AKEML +D EMR A +EI AK + +E E++ L+LPKD ND N FIEIRAG
Sbjct: 61 DLESAKEMLEEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAG 120
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+A+F DL RMY R++E N W+ EI+S + E GG+KEII ++ G Y KLKFE
Sbjct: 121 AGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFE 180
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
SG HRVQRVP+TE+QGR+HTSA TV V+ E E E I+INPADL++DT+R+SGAGGQH+N
Sbjct: 181 SGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVN 240
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
KTDSA+RITHIPTGIVV+CQ+ RSQHKN+A A+ +L ARI+ + +++S RR L+
Sbjct: 241 KTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLV 300
Query: 299 GS 300
S
Sbjct: 301 AS 302
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 149/309 (48%), Positives = 217/309 (70%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
M KL++ ++ +EL L++ EV + + + V+ H+ + IV++Y YKK ++I
Sbjct: 1 MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
A+ ML+ D + R E++ K+R ++E ++K L+LPKD ND++N+ +EIRAG GG
Sbjct: 61 AERMLDEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
+E+ALF DL RMY ++++R WK EI+ +++GG+KE+I I G VYS++KFESGV
Sbjct: 121 EEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE+ GRIHTS TVAV+PEA+E+E + INP DLRID + ASGAGGQH+NKT+
Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLPEAEEVE-VEINPNDLRIDVFCASGAGGQHVNKTE 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITHIPTGIVV CQ+++SQHKNK A+KIL AR+ D +EQ++ A R+ +G+
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAELASARKSQVGTG 299
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 300 DRSERIRTY 308
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 148/307 (48%), Positives = 208/307 (67%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDII 63
++ SKL+ F KR +EL+ LL+ ++ N+I +E L PIV Y K ++I
Sbjct: 1 MLASKLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIE 60
Query: 64 TAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDE 123
K +LND E+ A +E+ ++ +E EIK L+LPKD ND+RNIF+EIRAG GGDE
Sbjct: 61 ENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDE 120
Query: 124 SALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
++LFV DL++ Y R++E +K EI+S S +GG+KEII + G YS+LK+E G HR
Sbjct: 121 ASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHR 180
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
VQRVP+TE+QGR+HTSA TVAV+PE D+IE I INP DL++D R+SG GGQ +N TDSA
Sbjct: 181 VQRVPQTESQGRVHTSAITVAVMPEVDDIE-IEINPNDLKVDVMRSSGHGGQSVNTTDSA 239
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
VRITHIPTGIVV Q+ +SQHKNK A+K+L AR+ + + E+ + ++ R+ +GS +
Sbjct: 240 VRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDR 299
Query: 304 KSPLNIF 310
+ +
Sbjct: 300 SERIRTY 306
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 142/275 (51%), Positives = 195/275 (70%)
Query: 33 KDYCKKVREHSFLYPIVELYNNYKKINEDI----ITAKEMLNDLEMRNFALDEINLAKKR 88
+++ K +E++ L P VEL YKK+ E+ + K L D E+R ++ +
Sbjct: 31 QEFSKLSKEYAELKPKVELIARYKKLKEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDV 90
Query: 89 IFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEI 148
I +ELEIK+++LPKDK+D N+ +E+RAGTGGDE+ALF L MY +++ER W+FEI
Sbjct: 91 IPKLELEIKRMLLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEI 150
Query: 149 ISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPE 208
IS S +EIGGYKE A I G +V++KLKFESGVHRVQRVP+TE+ GRIHTS TVAV+PE
Sbjct: 151 ISISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPE 210
Query: 209 ADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKA 268
+++ D+ IN DLRID YR+SG GGQ +N TDSAVRITHIPTGIVV Q+++SQHKN+A
Sbjct: 211 PEDV-DVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRA 269
Query: 269 FALKILLARIKDSKLREQQSNTAKMRRLLIGSVQK 303
A+K+L R+ + + + Q + MR+ IGS ++
Sbjct: 270 KAMKVLRVRLYEIERNKVQQEISSMRKSQIGSGER 304
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 142/285 (49%), Positives = 203/285 (71%)
Query: 40 REHSFLYPIVELYNNYKKINEDIITAKEMLN----DLEMRNFALDEINLAKKRIFDIELE 95
RE+S L PI+ L YK ++I +E++N D E+R+ A DE ++ +K + + E
Sbjct: 37 REYSDLLPIMSLIEKYKSTQKEIAELEELVNSASTDPELRSLAKDESHIKQKLLPKLRHE 96
Query: 96 IKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSE 155
++ +LPKD++D RN +EIRAGTGG+E+ALFV +L RMY++++ER WK E I+ S +
Sbjct: 97 LQLSLLPKDRDDSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKVETINISTTG 156
Query: 156 IGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDI 215
IGGYKE I G +V+++LKFESGVHRVQRVP+TE+ GR+HTSA TVAV+PE +E+ D+
Sbjct: 157 IGGYKEASFSIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEV-DL 215
Query: 216 NINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILL 275
I+ DLRID YR+SG GGQ +N TDSAVRITHIPTGIVV Q+++SQHKNK+ ALK+L
Sbjct: 216 KIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLR 275
Query: 276 ARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNILLKYVT 320
AR+ + + ++++ +KMR+ IGS + + + N L +T
Sbjct: 276 ARLYNLEKQKREEEISKMRKSQIGSGDRSERIRTY--NFLQSRIT 318
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 140/308 (45%), Positives = 214/308 (69%)
Query: 7 SKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAK 66
+ LE+ S++ +L +L ++ + +E+S L P++ + + Y + +DI +
Sbjct: 5 NSLEELSQKFYKLKSMLEDPS-QLSVDSFVAASKEYSELLPVISVIDQYNILQKDIAGLE 63
Query: 67 EMLN----DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
E++N D E+++ A +E +K++ ++ ++K +LPKDK+D RN +EIRAGTGG+
Sbjct: 64 ELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTGGE 123
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ALFV DL RMY +++E+ WKFE I+ S + IGG+KEI I G NV+++LKFESGVH
Sbjct: 124 EAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFESGVH 183
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVP+TE GR+HTSA TVAV+PE +E+ D+ I+ DLRID YR+SG GGQ +N TDS
Sbjct: 184 RVQRVPETEASGRLHTSAATVAVLPEIEEV-DLKIDEKDLRIDVYRSSGPGGQSVNTTDS 242
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRITHIP+GIVV Q+++SQHKNK+ ALK+L AR+ + + +++ + ++MR+ IGS
Sbjct: 243 AVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDAEISQMRKSQIGSGD 302
Query: 303 KKSPLNIF 310
+ + +
Sbjct: 303 RSERIRTY 310
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 138/312 (44%), Positives = 203/312 (65%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEV---HNNIKDYCKKVREHSFLYPIVELYNNYKKINED 61
ML +L+ R ++L+ LL+ + N +++Y K E S + VE+Y YK + E
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSK---EQSDIQETVEVYREYKDVREQ 57
Query: 62 IITAKEMLND---LEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+ AK ML D EMR +E++ + + + +K L++PKD ND +N+ +E+R
Sbjct: 58 LKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 117
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GGDE+ALF DL RMY R++E WK EII S +E+GGYKEII I G ++KLKFE
Sbjct: 118 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 177
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
+G HRVQRVP+TE+ GRIHTS TVAV+PEA+E+E I+I+ D+R+DT+ +SG GGQ +N
Sbjct: 178 NGAHRVQRVPETESGGRIHTSTATVAVLPEAEEVE-IDIHEKDVRVDTFASSGPGGQSVN 236
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
T SAVR+TH+PTG+VV CQ+++SQ KNK A+K+L AR+ D +E Q+ + R+ +
Sbjct: 237 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAV 296
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 297 GTGDRSERIRTY 308
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 135/303 (44%), Positives = 204/303 (67%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
+L++ ++R + L+ + ++I K E+S L P+VE ++++ D+ A+
Sbjct: 6 RLDQITQRFQYLEAAMADGASGSDIAALAK---EYSDLRPVVEQIAAWRQLCADMDEARA 62
Query: 68 MLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALF 127
ML+D +M+ A +E+ L K R+ + E ++ +LPKD D R +EIR GTGGDE+ALF
Sbjct: 63 MLSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDEAALF 122
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
DLLRMY R++E WK E+I +E+GG KE++ARI G NV+++LK+ESGVHRVQRV
Sbjct: 123 AGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGVHRVQRV 182
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
P+TE+ GRIHTSA TVAV+PEA ++ DI I+P D+RIDT R+SGAGGQH+N TDSAVRIT
Sbjct: 183 PETESGGRIHTSAATVAVLPEAQDV-DIQIDPGDIRIDTMRSSGAGGQHVNTTDSAVRIT 241
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPL 307
H+P+GIVV +++SQH+N+ A+++L R+ D + + + R +G+ + +
Sbjct: 242 HLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLERQRLDRERSASRSAQVGTGDRSERI 300
Query: 308 NIF 310
+
Sbjct: 301 RTY 303
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 134/310 (43%), Positives = 202/310 (65%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYK----KINE 60
++ K+E K KEL L +V +N +Y K + S L +V ++ +K ++ E
Sbjct: 57 LIRKMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLE 116
Query: 61 DIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ AKE +D +M EIN K I ++E ++K L+LP D D RNI +E+RAGTG
Sbjct: 117 SKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTG 176
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESG 180
GDE+A++ DL+RMY R+SER+ WKF ++S S +E GGYK + I G VYSKLK+ESG
Sbjct: 177 GDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESG 236
Query: 181 VHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKT 240
VHRVQRVP+TETQGR+HTS TVA++PEADE+E + I+P D+ + + R+ GAGGQ++NK
Sbjct: 237 VHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTSARSGGAGGQNVNKV 295
Query: 241 DSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
++A+ + H P+GI + C +R+Q +NKA A ++L A++ + K+REQQ R+ +G+
Sbjct: 296 ETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGT 355
Query: 301 VQKKSPLNIF 310
+ + +
Sbjct: 356 GARSEKIRTY 365
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 128/312 (41%), Positives = 201/312 (64%)
Query: 5 MLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIIT 64
ML +LE KR +E++ +++ EV N+ + +E + L VE+Y YK I++++
Sbjct: 1 MLERLENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELED 60
Query: 65 AKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
K +L D +M++ EI +K + D+ ++ +LPKD ND ++I +EIRAGTGG
Sbjct: 61 TKNLLEIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTGG 120
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
DE+ LF DL +MY R++ WK E+I + + G KE++ + G +S+LK+E GV
Sbjct: 121 DEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGV 180
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP+TE GRIHTS TVAV+P+ +E+ DI+IN D+R+D + +SGAGGQ++ K
Sbjct: 181 HRVQRVPQTEASGRIHTSTATVAVLPQVEEV-DIDINMDDVRVDIFHSSGAGGQNVQKVA 239
Query: 242 SAVRITHIPTGIVVQCQNDRSQ--HKNKAFA-LKILLARIKDSKLREQQSNTAKMRRLLI 298
+A+R+THIPTG+VV CQ++RSQ +KNKAFA L+ L ++ SK+ E+++ + RR +
Sbjct: 240 TAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTES---RRAQV 296
Query: 299 GSVQKKSPLNIF 310
G + + +
Sbjct: 297 GQADRSEKIRTY 308
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 131/311 (42%), Positives = 198/311 (63%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVH----NNIKDYCKKVREHSFLYPIVELYNNYKKIN 59
+M +L R L L+ Q E + +K+R+ L I +L K+I+
Sbjct: 55 IMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKELRKLRDSMLL--INDLRAKQKEID 112
Query: 60 EDIITAKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGT 119
E +D +M + A+ E++ A + ++ + K +LPKD+ D+R+ +E+RAGT
Sbjct: 113 GLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAGT 172
Query: 120 GGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFES 179
GG+E++LF D+ RMY R+S++ WKF+I+ + S++ GYKE A I G +VY KLKFES
Sbjct: 173 GGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFES 232
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINK 239
G+HRVQR+P TE GRIHTSA +VA++P+ADE+ D+ + DLRIDTYR+ G+GGQH N
Sbjct: 233 GIHRVQRIPITEKSGRIHTSAISVAILPQADEV-DVQLRNEDLRIDTYRSGGSGGQHANT 291
Query: 240 TDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIG 299
T+SAVRI H+PTG++V Q++RSQH N+A ALK+L AR+ + + QS+ +K+R IG
Sbjct: 292 TNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIG 351
Query: 300 SVQKKSPLNIF 310
S + + +
Sbjct: 352 SGDRSGRIRTY 362
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 119/276 (43%), Positives = 182/276 (65%)
Query: 18 ELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNF 77
EL+ L +H+N + + R + L PIV + +D+ TA+E++ E +F
Sbjct: 17 ELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELVASDE--SF 74
Query: 78 ALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIR 137
A E+ + R+ +++ ++ ++ P+D +D +I +E+++G GG+ESALF DL RMYIR
Sbjct: 75 AA-EVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIR 133
Query: 138 FSERNYWKFEIISRSLSEIGGYKEIIARIIGL-----NVYSKLKFESGVHRVQRVPKTET 192
++ER+ W ++ + S++GGYK+ I V+S++KFE GVHRVQRVP TE+
Sbjct: 134 YAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTES 193
Query: 193 QGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 252
QGR+HTSA V V PE +E+ + I+ +DLRID +R+SG GGQ +N TDSAVRITH+PTG
Sbjct: 194 QGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTG 253
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQS 288
IVV CQN+RSQ +NK AL++L AR++ + E+Q+
Sbjct: 254 IVVTCQNERSQLQNKTRALQVLAARLQ--AMAEEQA 287
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 109/238 (45%), Positives = 160/238 (67%)
Query: 73 EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLL 132
++R A EI ++ I +++ +I L++P ++ D ++ +E+ AG GG E+ LF +++
Sbjct: 77 DLRKLAEREIVSCEEEIAELKHQIVLLLIPSEETDNSDLVMEVTAGVGGQEAMLFTSEIF 136
Query: 133 RMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTET 192
MY R++ WKFEI+ SEIGG + +A I GL+ Y +KFE GVHRVQRVPKTE
Sbjct: 137 DMYRRYAAYKKWKFEILEYFPSEIGGLRHAVASIAGLDAYKYMKFEGGVHRVQRVPKTEK 196
Query: 193 QGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 252
QGRIHTS TVA++P+ E+E + INP DLRI+T RASGAGGQH+N TDSAVRI HIPTG
Sbjct: 197 QGRIHTSTMTVAILPQPTEME-LKINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTG 255
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ +CQ +RSQ +NK A+++L A++ + KL E+ R++ IG+ + + +
Sbjct: 256 VTSECQQERSQIRNKEKAMQMLCAKLYNIKLEEENKKRNSARKIQIGTKGRSEKIRTY 313
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 545 (196.9 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 126/365 (34%), Positives = 209/365 (57%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
KH + K LE SK +++D LL + N + + R + L P+ + ++
Sbjct: 40 KHEAVQKYLETLSKEYQQVDHLLNA-DSKNEFEQRTLR-RRRADLSPVATAFQEIREAES 97
Query: 61 DIITAKEMLNDLEMRN------FALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
++ + M +L+ R+ AL+E K+I + ++ +L++PK+K DK ++ +E
Sbjct: 98 ELQELETMCRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKYDKSHVILE 157
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ AG TGGD F ++ MY +++ W F+I++ +EIGG A I G +VY
Sbjct: 158 VTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVY 217
Query: 173 SKLKFESGVHRVQRVPKTETQGR---IHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G HRVQR+P+T R IHT +V V+P+ +E+ D+ ++P DLRIDT+RA
Sbjct: 218 RHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEV-DVKVDPKDLRIDTFRA 276
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+NKTDSAVRI H+PTG+VV+CQ +RSQ NK AL+ L A++ + +Q S
Sbjct: 277 KGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQ 336
Query: 290 TAKMRRLLIGSVQKKSPLNIFETNILLKYVT--RLS----DVELIINNEKKLHKQEINIL 343
R+L +G+ + + + N VT R+S +++ I++ +++L K ++
Sbjct: 337 EQSARKLQLGTRAQSERIRTY--NFTQDRVTDHRISYDARNIKEILSGKEELDK----LI 390
Query: 344 NKLIQ 348
N+L++
Sbjct: 391 NRLLE 395
Score = 40 (19.1 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 493 LRFEPINALTDYSNGLSSI 511
L F + ALT+Y L S+
Sbjct: 394 LEFAEMEALTEYLENLQSV 412
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 119/279 (42%), Positives = 175/279 (62%)
Query: 60 EDIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
+++ + +L+D ++R A +EI +K I ++ +I L++P ++ DK ++ +E+ A
Sbjct: 76 QELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLILEVTA 135
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
G GG E+ LF +++ MY +++ W FE + SEIGG + A I G Y +KF
Sbjct: 136 GVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKF 195
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
E GVHRVQRVPKTE QGRIHTS TVA++P+ EI ++ INP DLRIDT RASGAGGQH+
Sbjct: 196 EGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEI-NLVINPKDLRIDTKRASGAGGQHV 254
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
N TDSAVRI H+PTGIV +CQ +RSQ KNK A+K L A++ +L E+ S R++
Sbjct: 255 NTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYNARKIQ 314
Query: 298 IGSVQKKSPLNI--FETNILLKY-VTR-LSDVELIINNE 332
IG+ + + F N + + + + L D+E + E
Sbjct: 315 IGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGE 353
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 119/279 (42%), Positives = 175/279 (62%)
Query: 60 EDIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRA 117
+++ + +L+D ++R A +EI +K I ++ +I L++P ++ DK ++ +E+ A
Sbjct: 76 QELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLILEVTA 135
Query: 118 GTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKF 177
G GG E+ LF +++ MY +++ W FE + SEIGG + A I G Y +KF
Sbjct: 136 GVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKF 195
Query: 178 ESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHI 237
E GVHRVQRVPKTE QGRIHTS TVA++P+ EI ++ INP DLRIDT RASGAGGQH+
Sbjct: 196 EGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEI-NLVINPKDLRIDTKRASGAGGQHV 254
Query: 238 NKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLL 297
N TDSAVRI H+PTGIV +CQ +RSQ KNK A+K L A++ +L E+ S R++
Sbjct: 255 NTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYNARKIQ 314
Query: 298 IGSVQKKSPLNI--FETNILLKY-VTR-LSDVELIINNE 332
IG+ + + F N + + + + L D+E + E
Sbjct: 315 IGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGE 353
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 115/275 (41%), Positives = 173/275 (62%)
Query: 38 KVREHSFLYPIVELYNNYKKINEDIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELE 95
KVR L +++L N ++ ++ + +L+D ++R A +EI L +K I ++ +
Sbjct: 58 KVRRPELL-AVIKLLNEKER---ELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQ 113
Query: 96 IKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSE 155
I L++P ++ D+ ++ +E+ AG GG E+ LF +++ MY +++ W FE + SE
Sbjct: 114 IILLLVPSEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSE 173
Query: 156 IGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDI 215
+GG + A I G Y +KFE GVHRVQRVPKTE QGR+HTS TVA++P+ EI ++
Sbjct: 174 LGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEI-NL 232
Query: 216 NINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILL 275
INP DLRIDT RASGAGGQH+N TDSAVRI H+PTG+V +CQ +RSQ KNK A+ L
Sbjct: 233 VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 292
Query: 276 ARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
A++ L E+ + R++ IGS + + +
Sbjct: 293 AKLYSMHLEEEINKRQNARKIQIGSKGRSEKIRTY 327
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 112/252 (44%), Positives = 165/252 (65%)
Query: 54 NYKKIN---EDIITAKEML--NDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDK 108
N KK+ +++ +++L ND E+ A E I D+ +I L++P++++D
Sbjct: 26 NIKKLEVKQKEMEDMQDLLKDNDPELLELAETEKEAVLADIQDLRQKILSLLIPEEESDM 85
Query: 109 RNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIG 168
+ +E+ AG GG E+ LF ++ MY ++ N W F+++ + SE+GG + A + G
Sbjct: 86 SELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSG 145
Query: 169 LNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYR 228
Y KLKFE+GVHRVQRVPKTE++GR HTS TVA++P+ EI INP DL+I+T R
Sbjct: 146 PLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEIS-FTINPKDLKIETKR 204
Query: 229 ASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQS 288
ASGAGGQH+N TDSAVRITH+PTG V +CQ +RSQ KNK A+K+L A++ ++L E+ S
Sbjct: 205 ASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEETS 264
Query: 289 NTAKMRRLLIGS 300
+ R+L IG+
Sbjct: 265 RRYQARKLQIGT 276
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 110/252 (43%), Positives = 164/252 (65%)
Query: 61 DIITAKEMLNDL--EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAG 118
+++ + +L+D ++R A +EI +K I ++ +I L++P ++ D+ ++ +E+ AG
Sbjct: 77 ELLETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEADENDLILEVTAG 136
Query: 119 TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFE 178
GG E+ LF +++ MY +++ W FEI+ SEIGG + A I G Y +KFE
Sbjct: 137 VGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASIGGSEAYKHMKFE 196
Query: 179 SGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHIN 238
GVHRVQRVPKTE QGRIHTS TVA++P+ EI ++ INP DLRIDT RASGAGGQH+N
Sbjct: 197 GGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEI-NLVINPKDLRIDTKRASGAGGQHVN 255
Query: 239 KTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLI 298
TDSAVRI H+PTG+V +CQ +RSQ KN+ A+K L A++ L E+ S R++ +
Sbjct: 256 TTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLEEETSKRYNARKVQV 315
Query: 299 GSVQKKSPLNIF 310
G+ + + +
Sbjct: 316 GTKGRSEKIRTY 327
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 127/360 (35%), Positives = 200/360 (55%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
KH L K +E +K + LD L + + D R H+ L P+ +Y ++ +
Sbjct: 73 KHKALQKYMEDLNKEYQTLDHCL--HHISASEGDRRSLTRRHAELAPLAVIYKEIQEAEQ 130
Query: 61 DIITAKEMLNDL------EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
I + M L +++ AL+E ++I + E+ + +LPK+K DK ++ +E
Sbjct: 131 AIEELESMCKSLNKQDEKQLQELALEERQTIAQKINMLYSELFQSLLPKEKYDKNDVILE 190
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ +G TGGD F ++ MY +S +W+FE+++ + ++ GG ARI G NVY
Sbjct: 191 VTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVY 250
Query: 173 SKLKFESGVHRVQRVPK---TETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G+HRVQR+P+ + RIHT +V V+P DE+ D+ ++P DLRIDT+RA
Sbjct: 251 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDEV-DVKVDPKDLRIDTFRA 309
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+N TDSAVR+ HIPTG+VV+CQ +RSQ KNK AL++L AR+ + + +
Sbjct: 310 KGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQ 369
Query: 290 TAKMRRLLIGSVQKKSPLNIFETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQR 349
R+L +G+ + + + N VT + + N K+ E L++LIQR
Sbjct: 370 QRSARKLQVGTRAQSERIRTY--NFTQDRVTD-HRIAYEVRNIKEFLCGE-KCLDQLIQR 425
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 116/274 (42%), Positives = 172/274 (62%)
Query: 66 KEMLNDL--EMRNFALDEINLAKKR-IFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGD 122
+++L D ++R A +E+ + KR + + L+I L++P ++ DK ++ +E+ AG GG
Sbjct: 82 EQLLRDENEDLRKLAENEMTSSSKRGVIFLYLQIILLLVPSEETDKNDLILEVTAGVGGQ 141
Query: 123 ESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVH 182
E+ LF +++ MY +++ W FE + SEIGG + A I GL Y +KFE GVH
Sbjct: 142 EAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVH 201
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
RVQRVPKTE QGRIHTS TVA++P+ EI ++ INP DLRI T RASGAGGQH+N TDS
Sbjct: 202 RVQRVPKTEKQGRIHTSTMTVAILPQPTEI-NLVINPKDLRIHTKRASGAGGQHVNTTDS 260
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
AVRI H+PTG+V +CQ +RSQ KN+ A+K L A++ L E+ S R++ +G+
Sbjct: 261 AVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTKG 320
Query: 303 KKSPLNI--FETNILLKY-VTR-LSDVELIINNE 332
+ + F N + + + + L D+E + E
Sbjct: 321 RSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGE 354
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 120/309 (38%), Positives = 184/309 (59%)
Query: 6 LSKLEKFSKRLKEL---DFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDI 62
L+ + K SK L+ + + L Q E+ K+ + + ++E K++ +
Sbjct: 79 LNLMGKKSKELRNMIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKELQTML 138
Query: 63 ITAKEMLNDLEMRNFALDEIN-LAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
+ +E D + + +IN L ++ I +E ++ +LP K+D + +EIRAGTGG
Sbjct: 139 V--EE--TDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGG 194
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
E+ LF D+ MY + + W FE + S++E+GGY+++ + G V+ LK+ESGV
Sbjct: 195 SEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGV 254
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TETQGRIHTS TVA++PE ++ DI I+ DL++D YR+SG GGQ +N TD
Sbjct: 255 HRVQRVPLTETQGRIHTSTITVAILPEPKDV-DIQIHDRDLKVDIYRSSGNGGQSVNTTD 313
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRITH+PTGI V Q++RSQH+N++ A+KIL ARI + + Q+ R IGS
Sbjct: 314 SAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNERVSERNAQIGSA 373
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 374 LRSERIRTY 382
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 119/311 (38%), Positives = 179/311 (57%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
KH L K +E +K + LD L V+ D R H+ L P+ +Y ++ +
Sbjct: 70 KHKALQKYMEDLNKEYRTLDQCLQHLSVNEG--DRKSLNRRHAELAPLAAIYQEIQEAEQ 127
Query: 61 DIITAKEMLNDL------EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
I M L +++ AL+E ++I + E+ + ++PK+K DK ++ IE
Sbjct: 128 AIEELDSMCKSLSKQDEKQLQELALEERQTIAEKINVLYSELFQSLVPKEKYDKNDVIIE 187
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ +G TGGD F ++ MY +S WKFE+++ + ++ GG ARI G NVY
Sbjct: 188 VTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVY 247
Query: 173 SKLKFESGVHRVQRVPKTETQGR---IHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E GVHRVQR+P+ R IHT +V V+P+ DE+ D+ ++P DLRIDT+RA
Sbjct: 248 KHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEV-DVKVDPKDLRIDTFRA 306
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+N TDSAVR+ HIPTG+VV+CQ +RSQ KNK AL++L AR+ + + +
Sbjct: 307 KGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQ 366
Query: 290 TAKMRRLLIGS 300
R+L +G+
Sbjct: 367 QQSTRKLQVGT 377
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 105/238 (44%), Positives = 156/238 (65%)
Query: 73 EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLL 132
+++ A EI L +K+I +++ +I L++P ++ D ++ +E+ AG GG E+ LF +++
Sbjct: 84 DLKKLAESEIALCQKQITELKHQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTSEMF 143
Query: 133 RMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTET 192
MY +++ W FE + SE+GG + A + G Y +KFE GVHRVQRVPKTE
Sbjct: 144 DMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPKTEK 203
Query: 193 QGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 252
QGRIHTS TVA++P+ EI+ + INP DLRIDT RASGAGGQH+N TDSAVRI H+PTG
Sbjct: 204 QGRIHTSTMTVAILPQPTEIKLV-INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTG 262
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
I+ +CQ +RSQ KN+ A+K L AR+ L E+ + R++ +G+ + + +
Sbjct: 263 IISECQQERSQLKNRELAMKKLRARLYSMHLEEETAKRYNARKIQVGTKGRSEKIRTY 320
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 106/238 (44%), Positives = 154/238 (64%)
Query: 73 EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLL 132
+++ A EI L +K I +++ I L++P + D ++ +E+ AG GG E+ LF +++
Sbjct: 84 DLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTSEMF 143
Query: 133 RMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTET 192
MY +++ W FE + SE+GG + A I G Y +KFE GVHRVQRVPKTE
Sbjct: 144 DMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPKTER 203
Query: 193 QGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 252
QGRIHTS TVA++P+ EI+ + INP DLRIDT RASGAGGQH+N TDSAVRI H+PTG
Sbjct: 204 QGRIHTSTMTVAILPQPTEIKLV-INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTG 262
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
I+ +CQ +RSQ KN+ A+K L AR+ +L E+ + R++ +G+ + + +
Sbjct: 263 IISECQQERSQLKNRELAMKKLRARLYSMRLEEETAKRYSARKIQVGTKGRSEKIRTY 320
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 125/360 (34%), Positives = 198/360 (55%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+H L K +E SK + LD L D R H+ L P+ +Y ++ +
Sbjct: 72 RHKALQKYMEDLSKEYQTLDRCLQHISAPEG--DRRSLNRRHAELAPLAVIYKEIQEAEQ 129
Query: 61 DIITAKEMLNDL------EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
I + M L +++ AL+E ++I + E+ + ++PK+K DK ++ +E
Sbjct: 130 AIEELESMCKSLNKQDEKQLQELALEEKRTIAQKINMLYHELFQSLVPKEKYDKNDVILE 189
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ +G TGGD F ++ MY +S +W FE+++ + ++ GG ARI G NVY
Sbjct: 190 VTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVY 249
Query: 173 SKLKFESGVHRVQRVPK---TETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G+HRVQR+P+ + RIHT +V V+P+ DE+ D+ ++P DLRIDT+RA
Sbjct: 250 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEV-DVKVDPKDLRIDTFRA 308
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+N TDSAVR+ H+PTG+VV+CQ +RSQ KNK AL++L AR+ + +++
Sbjct: 309 KGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKEKCQ 368
Query: 290 TAKMRRLLIGSVQKKSPLNIFETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQR 349
R+L +G+ + + + N VT + + N K+ E L+ LIQR
Sbjct: 369 QQSARKLQVGTRAQSERIRTY--NFTQDRVTD-HRIAYEVRNIKEFLCGE-KCLDLLIQR 424
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 115/311 (36%), Positives = 181/311 (58%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
KH L K +E SK + L+ L V+ + R H+ L P+ +Y ++ +
Sbjct: 84 KHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLN--RRHAELAPLAAIYQEIQETEQ 141
Query: 61 DIITAKEMLNDL------EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
I + M L +++ AL+E ++I + E+ + ++PK+K DK ++ +E
Sbjct: 142 AIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILE 201
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ AG TGGD F ++ MY +S +W+FE+++ + ++ GG ARI G VY
Sbjct: 202 VTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVY 261
Query: 173 SKLKFESGVHRVQRVPK---TETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G+HRVQR+P+ + RIHT +V V+P+ DE+ D+ ++P DLRIDT+RA
Sbjct: 262 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEV-DVKLDPKDLRIDTFRA 320
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+NKTDSAVR+ HIPTG+VV+CQ +RSQ KNK A ++L AR+ + + +
Sbjct: 321 KGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQ 380
Query: 290 TAKMRRLLIGS 300
R+L +G+
Sbjct: 381 QQSARKLQVGT 391
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 115/311 (36%), Positives = 181/311 (58%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
KH L K +E SK + L+ L V+ + R H+ L P+ +Y ++ +
Sbjct: 71 KHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLN--RRHAELAPLAAIYQEIQETEQ 128
Query: 61 DIITAKEMLNDL------EMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
I + M L +++ AL+E ++I + E+ + ++PK+K DK ++ +E
Sbjct: 129 AIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILE 188
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ AG TGGD F ++ MY +S +W+FE+++ + ++ GG ARI G VY
Sbjct: 189 VTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVY 248
Query: 173 SKLKFESGVHRVQRVPK---TETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G+HRVQR+P+ + RIHT +V V+P+ DE+ D+ ++P DLRIDT+RA
Sbjct: 249 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEV-DVKLDPKDLRIDTFRA 307
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+NKTDSAVR+ HIPTG+VV+CQ +RSQ KNK A ++L AR+ + + +
Sbjct: 308 KGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQ 367
Query: 290 TAKMRRLLIGS 300
R+L +G+
Sbjct: 368 QQSARKLQVGT 378
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 121/365 (33%), Positives = 206/365 (56%)
Query: 2 KHLMLSK-LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKIN- 59
KH L K +E +K + LD L + + N D R H+ L P+ +Y ++
Sbjct: 72 KHKALQKYMEDLNKEYQTLDQCL--QGISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQ 129
Query: 60 --EDIITAKEMLN---DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIE 114
E++ + + LN + +++ +E + ++I + E+ + ++PK+K D ++ +E
Sbjct: 130 AIEELESLCKSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILE 189
Query: 115 IRAG--TGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ +G TGGD F ++ MY +S +WKFE+++ + ++ GG ARI G +VY
Sbjct: 190 VTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVY 249
Query: 173 SKLKFESGVHRVQRVPK---TETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRA 229
LK+E G+HRVQR+P+ + RIHT +V V+P+ DE+ D+ ++P DLR+DT+RA
Sbjct: 250 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEV-DVKVDPKDLRVDTFRA 308
Query: 230 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSN 289
GAGGQH+N TDSAVR+ HIPTG+VV+CQ +RSQ KNK AL++L AR+ + + +
Sbjct: 309 RGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQ 368
Query: 290 TAKMRRLLIGSVQKKSPLNIFE------TNILLKYVTRLSDVELIINNEKKLHKQEINIL 343
R+L +G+ + + + T+ + Y R D++ + EK L + ++
Sbjct: 369 QQNARKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVR--DIKEFLRGEKCLDQ----LI 422
Query: 344 NKLIQ 348
+L+Q
Sbjct: 423 ERLLQ 427
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 116/282 (41%), Positives = 174/282 (61%)
Query: 14 KRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML---N 70
+RL+E++ L Q +V N + +E S L +V+ + K+ ED+ E+ +
Sbjct: 32 ERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEAD 91
Query: 71 DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVND 130
D E N A+ E++ ++++ +LE +++ + D + +++I+AG+GG E+ + +
Sbjct: 92 DEETFNEAVAELDALEEKL--AQLEFRRMF--SGEYDSADCYLDIQAGSGGTEAQDWASM 147
Query: 131 LLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKT 190
L RMY+R++E +K EII S E+ G K + +I G Y L+ E+GVHR+ R
Sbjct: 148 LERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPF 207
Query: 191 ETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIP 250
++ GR HTS + V PE D+ DI INPADLRID YR SGAGGQH+N+T+SAVRITHIP
Sbjct: 208 DSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRITHIP 267
Query: 251 TGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
TGIV QCQNDRSQHKNK A+K + A++ + L Q+ N K
Sbjct: 268 TGIVTQCQNDRSQHKNKDQAMKQMKAKLYE--LEMQKKNAEK 307
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 184/318 (57%)
Query: 4 LMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYK-KINEDI 62
L++ + EK+ LK+LD K++ I K + ++ L + + + YK K+NE +
Sbjct: 52 LLVKQAEKYEAELKDLD-----KDLSCGIHFDVNKQKHYAKLSALTDTFIEYKEKLNE-L 105
Query: 63 ITAKEML-NDLEMRNFALDEI-NLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTG 120
+ +EM+ +D +R A E L + + KL+ P DK ++ +E+R G G
Sbjct: 106 KSLQEMIVSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSL-LELRPGVG 164
Query: 121 GDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIG-GYKEIIARIIGLNVYSKLKFES 179
G E+ +F +LL MYI ++ WK+ IIS++ +E G G + I I Y +L+FE+
Sbjct: 165 GIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEA 224
Query: 180 GVHRVQRVPKTETQGRIHTSACTVAVIPE-ADE-IEDIN-----INPADLRIDTYRASGA 232
GVHRVQR+P TET+GR HTS V V+P+ DE + I+ P ++R+D RASG
Sbjct: 225 GVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGK 284
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQH+N TDSAVR+THIP+GIVV Q++RSQHKNKA A IL AR+ + + E++ K
Sbjct: 285 GGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERK 344
Query: 293 MRRLLIGSVQKKSPLNIF 310
R+ + S + + +
Sbjct: 345 ARKSQVSSTNRSDKIRTY 362
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 116/290 (40%), Positives = 166/290 (57%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNN-YKKINE--DIIT 64
K E RLKE++ L +++K +E + + +++ Y N + +N+ ++
Sbjct: 25 KPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENAFNALNDASELFD 84
Query: 65 AKEMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDES 124
ND E ++ + I LEI L+ +ND +N + I G GG ES
Sbjct: 85 LANSENDTETLEALFNDAPKLEDTI--TSLEISMLL--SGENDGKNAIVSIHPGAGGTES 140
Query: 125 ALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRV 184
+ + L RMY+RF ER +K E + E G K++ + G N Y LK E+G+HR+
Sbjct: 141 NDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRL 200
Query: 185 QRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAV 244
R ++ GR HTS +V V PE D+ +I I D+RID YRASGAGGQH+NKT+SAV
Sbjct: 201 VRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAV 260
Query: 245 RITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQ--SNTAK 292
RITH PTGIVVQCQNDRSQHKNKA A K+L +R+ + +L +QQ +NT +
Sbjct: 261 RITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE 310
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 110/285 (38%), Positives = 170/285 (59%)
Query: 17 KELDFLLTQK----EVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDL 72
KEL LT K + +N + K ++E + L +E Y K E++ ++L +
Sbjct: 29 KELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQEELTVLLQLLEEE 88
Query: 73 EMRNFALDEINLAKKRIFDIE-LEIKKLIL-PKDKNDKRNIFIEIRAGTGGDESALFVND 130
E A++ + AKK + + +EI+ L+ P DKN + + + AG GG E+ +V
Sbjct: 89 ENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKN---SAIVSLHAGAGGTEAQDWVEM 145
Query: 131 LLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKT 190
L RMY R++E +K E+I R L E G K + + G Y LK E GVHR+ R+
Sbjct: 146 LYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPF 205
Query: 191 ETQGRIHTSACTVAVIPE-ADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHI 249
+ GR HTS +V V+PE A++I +I + +L+I+T+R+ GAGGQH+NKT+SAVRITH+
Sbjct: 206 DFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKTESAVRITHL 265
Query: 250 PTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMR 294
PTGI V CQN+RSQ N+A A K+L A++ D ++++++ AK+R
Sbjct: 266 PTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLR 310
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 107/286 (37%), Positives = 170/286 (59%)
Query: 13 SKR--LKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLN 70
SKR ++EL+ + +N ++ K +RE + + +++L++ + +DI E L
Sbjct: 27 SKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDIRVLIE-LG 85
Query: 71 DLEMRNFALDEINLAKKRIF-DIE-LEIKKLIL-PKDKNDKRNIFIEIRAGTGGDESALF 127
+ LDE+ + ++E E ++++ P DKN + F+ I AG GG E+ +
Sbjct: 86 EEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKN---SCFVSINAGAGGTEAQDW 142
Query: 128 VNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRV 187
LLRMY+R+ ER WK EI + G K + G Y LK E+G+HR+ R+
Sbjct: 143 AEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRI 202
Query: 188 PKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRIT 247
++ R HTS +V V PE ++ +I I +DLR+DTYR+SGAGGQH+N TDSAVR+T
Sbjct: 203 SPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLT 262
Query: 248 HIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKM 293
H+PTGIVV CQ +RSQH NKA AL++L A++ + +L+E++ +++
Sbjct: 263 HLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASEL 308
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 98/271 (36%), Positives = 157/271 (57%)
Query: 48 IVELYNNYKKINEDIITAKEMLNDLEMRNFALDEI-NLAKKRIFDIELEIKKLILPKDKN 106
I+ +++ + + ++ I E+ +D ++ A +E+ ++ +I + E++ + P K
Sbjct: 86 ILSMFDKLETLTQEYIELTEITDDPDLYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKY 145
Query: 107 DKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARI 166
+ IE+R G GG+E++LF DLL MY+ F+ WK++IIS + G E I I
Sbjct: 146 ADKGCIIELRPGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSI 205
Query: 167 IGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININ-------P 219
L Y ++ ESGVHRVQR+P+TET+GR+HTS V V+P+ E + ++ P
Sbjct: 206 DTLGSYDIMRHESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAP 265
Query: 220 ADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIK 279
++RIDT RA G GGQH+N TDSAVR+ HIPTG++V Q++RSQ NKA A IL +R+
Sbjct: 266 GEVRIDTMRAGGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLA 325
Query: 280 DSKLREQQSNTAKMRRLLIGSVQKKSPLNIF 310
+ E+ K+R + S + + +
Sbjct: 326 QKEQEEEMLKQKKLRTDQVSSTDRSDKIKTY 356
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 97/211 (45%), Positives = 133/211 (63%)
Query: 126 LFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQ 185
LF +++ MY +++ W FE + SEIGG + A I GL Y +KFE GVHRVQ
Sbjct: 2 LFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQ 61
Query: 186 RVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
RVPKTE QGRIHTS TVA++P+ EI ++ INP DLRI T RASGAGGQH+N TDSAVR
Sbjct: 62 RVPKTEKQGRIHTSTMTVAILPQPTEI-NLVINPKDLRIHTKRASGAGGQHVNTTDSAVR 120
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKS 305
I H+PTG+V +CQ +RSQ KN+ A+K L A++ L E+ S R++ +G+ +
Sbjct: 121 IVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTKGRSE 180
Query: 306 PLNI--FETNILLKY-VTR-LSDVELIINNE 332
+ F N + + + + L D+E + E
Sbjct: 181 KIRTYNFPQNRVTDHRINKSLHDLETFMQGE 211
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 113/328 (34%), Positives = 182/328 (55%)
Query: 31 NIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEML---NDLEMRNFALDEINLAKK 87
N D K++ L + Y+ +K ++E I K+M +D E++ A+ EIN
Sbjct: 64 NDTDLAKRIAR---LRRVHNAYSKFKSLSEQISDLKQMEAQESDAEVKMMAVTEINEISN 120
Query: 88 RI-FDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKF 146
+I IE +++ +LP+ + IEIR G GG E+A+F N+L+ MY +++ W
Sbjct: 121 KIPKSIE-DLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNC 179
Query: 147 EIISRSLSE-IGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAV 205
+ IS+S + + E I I G Y L E GVHRVQR P TET+GR+HTS +V V
Sbjct: 180 KFISKSAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIV 239
Query: 206 IPEADEIEDINI-NPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQH 264
+P+ E ++ + ++++I+ R+ GAGGQH+N+T+SAVR+THIPTGI V Q+ RSQH
Sbjct: 240 LPQVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQH 299
Query: 265 KNKAFALKILLARIKD-SKLREQQSNTAKMRRLLIGS--VQKKSPLNIFETNILLKYVTR 321
+NK A +L +R+ + +E ++ K + + S +K N F N + +
Sbjct: 300 QNKEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYN-FNQNRVTDHRIG 358
Query: 322 LS--DVELIINNEKKLHK--QEINILNK 345
LS D+ + E+K + ++I I N+
Sbjct: 359 LSMHDLSTFMQGEEKFDEFLEKIRIWNR 386
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 109/287 (37%), Positives = 165/287 (57%)
Query: 10 EKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKI---NEDIITAK 66
E RL+E + + + +N ++ K +RE L +++Y + N ++I
Sbjct: 26 ETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGIETDLADNIELIELG 85
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
EM +D ++ A + ++R + ELE L + D + F+EI AG GG ES
Sbjct: 86 EMEDDQDVIKDAEAALKALRERAAEKELEA----LLDGEADGNDTFLEINAGAGGTESCD 141
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
+ + L RMY+R++E+ +K E+ S S + G K +I G N Y LK ESGVHR+ R
Sbjct: 142 WASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVR 201
Query: 187 VPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRI 246
+ + + HTS +V V P D+ +I +NP+D+RIDTYR+SGAGGQH+N TDSAVRI
Sbjct: 202 ISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRI 261
Query: 247 THIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKL--REQQSNTA 291
THIPTGIVV +++SQH+N+ A+K L +R+ +L R + N A
Sbjct: 262 THIPTGIVVT-SSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAA 307
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 104/280 (37%), Positives = 166/280 (59%)
Query: 16 LKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMR 75
L+ LD + + ++ + + E S + ++ + +K ++D+ EM++D + R
Sbjct: 34 LESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDR 93
Query: 76 NFALDEINLAKKRIFDIELEIKKL-ILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRM 134
+F L IN A+ + + + KK + + D + F+ IR+G GG ES+ +V LLRM
Sbjct: 94 DF-LATIN-AELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRM 151
Query: 135 YIRFSERNYWKF--EIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTET 192
Y +++E ++ +F E + E G K + +I G+ Y + ESG+HR+ R+ +
Sbjct: 152 YTKWAE-SFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDH 210
Query: 193 QGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTG 252
+ HTS +V V P D DI I DLRIDTYRASGAGGQH+NKT+SAVRITHIP+G
Sbjct: 211 AAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSG 270
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
+VVQCQ RSQH+N+A A +L +R+ + +L+E++ A+
Sbjct: 271 MVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQ 310
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 101/309 (32%), Positives = 172/309 (55%)
Query: 8 KLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKE 67
KL+ + + L++ ++ + N K Y + + L +V + + I +AK+
Sbjct: 30 KLQAYLESLRQ-EYYAVRVNAAGNSKSYARLAQ----LEGVVSALEQRRVLERHITSAKD 84
Query: 68 ML--NDLEMRNFALDE----INLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGG 121
M D +MR +E ++L K+ D L +++L+ D + + + AG GG
Sbjct: 85 MEAEKDEDMRELMREENEVYVDLLGKQ--DQAL-LQELLTLSDDEEYPALIFGLNAGAGG 141
Query: 122 DESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGV 181
E+ LF +L MY + E W++E + ++IGG + + G + + L++E+GV
Sbjct: 142 QEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGV 201
Query: 182 HRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTD 241
HRVQRVP TE GR+HTS ++ VIP +I+ ++I DL+I+T RASGAGGQH+N TD
Sbjct: 202 HRVQRVPATEKSGRMHTSTASITVIPRPADIQ-VHIAEKDLKIETKRASGAGGQHVNTTD 260
Query: 242 SAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSV 301
SAVRI H+PTG+ V+ Q++RSQ KN+ A+K L +R+ +L +++ ++ GS+
Sbjct: 261 SAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMATKKAQQGSL 320
Query: 302 QKKSPLNIF 310
+ + +
Sbjct: 321 NRNEKIRTY 329
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 109/262 (41%), Positives = 156/262 (59%)
Query: 36 CKKVREHSFLYPIVEL---YNNYKKINEDIIT-AKEMLNDLEMRNFALDEINLAKKRIFD 91
C++ R L EL YN Y ++ I E+LN+LE L E + KK
Sbjct: 58 CERARISKTLNSFTELEEEYNYYTELLSVINNDTDELLNELEAGLAKLKE-KVQKK---- 112
Query: 92 IELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNY-WKFEIIS 150
E++ L ++ D + FIEI++G GG ES + + L RMY+R++E + +K EI+
Sbjct: 113 ---EVECLF--SNEADHNDCFIEIQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVH 167
Query: 151 RSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEAD 210
+ E G K ++IG N Y K ESG+HR+ R+ + + HT+ ++ V P +
Sbjct: 168 KLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVIN 227
Query: 211 EIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFA 270
E +I I DLRIDTYRASGAGGQH+NKT+SAVRITHIP+GIVVQCQN+RSQH+N A A
Sbjct: 228 EDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEA 287
Query: 271 LKILLARIKDSKLREQQSNTAK 292
+L +R+ KL+E++ A+
Sbjct: 288 HNLLKSRLYQLKLQEKEKKMAE 309
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 89/246 (36%), Positives = 145/246 (58%)
Query: 71 DLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVND 130
+ E+R+ A++E+ + ++ I +K+ ++P+ + +EIR G GGDE+++F +
Sbjct: 104 EAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAFE 163
Query: 131 LLRMYIRFSERNYWKFEI--ISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVP 188
LL+MY+ F + + + R + E + + Y L+ ESGVHRVQRVP
Sbjct: 164 LLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVP 223
Query: 189 KTETQGRIHTSACTVAVIPE---------ADEIEDIN----INPADLRIDTYRASGAGGQ 235
TE +GR HTSA +V V+P A +D N I+P ++R + RASGAGGQ
Sbjct: 224 TTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQ 283
Query: 236 HINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRR 295
H+NKT+SA+R+TH+PTGIVV Q+ RSQH N+ A +IL A++ +++ ++ ++RR
Sbjct: 284 HVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQELVELRR 343
Query: 296 LLIGSV 301
+G +
Sbjct: 344 GAMGGI 349
Score = 247 (92.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 37 KKVREHSFLYPIVELYNNYKKINEDIITAKEMLND----LEMRNFALDEINLAKKRIFDI 92
K R L P+ + + + NE + ML D E+R+ A++E+ + ++ I
Sbjct: 66 KIARRAGELGPVAKAWAEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAI 125
Query: 93 ELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEI--IS 150
+K+ ++P+ + +EIR G GGDE+++F +LL+MY+ F + + +
Sbjct: 126 SDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLE 185
Query: 151 RSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIP 207
R + E + + Y L+ ESGVHRVQRVP TE +GR HTSA +V V+P
Sbjct: 186 RGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLP 242
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 92/255 (36%), Positives = 145/255 (56%)
Query: 34 DYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKKRIFD-- 91
D +++ ++ +E N K D + EM ++ ++ L E ++F
Sbjct: 109 DTINQIKNYNQTKQSIEELNLLSKEFNDYLEVVEMSKNIGDNDW-LKETRSLINQLFSNC 167
Query: 92 IELEIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISR 151
ELE+K L+ KD D + +EI+AG GG++S + L MY ++ R + EII
Sbjct: 168 SELEVKALMNGKD--DSKGCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDT 225
Query: 152 SLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADE 211
+ E G Y+ +I G N Y L+ E G+HR+ R+ + G+ HTS +V V P +D+
Sbjct: 226 ADGEFG-YRHASLKIDGHNAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPISDD 284
Query: 212 IEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFAL 271
INI+P DL +T R+SGAGGQH+NKT+SAVRI HIPTGI V ++RSQH+NK+ L
Sbjct: 285 SIKINIDPKDLHFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGL 344
Query: 272 KILLARIKDSKLREQ 286
+L +++ +L+++
Sbjct: 345 LLLKSKLYSHELKKK 359
>UNIPROTKB|Q83AD8 [details] [associations]
symbol:prmC "Release factor glutamine methyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_02126 InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR007848 InterPro:IPR019874
Pfam:PF05175 GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008276 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 HSSP:Q9WYV8 KO:K02493 OMA:GRKGFWK
ProtClustDB:PRK09328 RefSeq:NP_820939.1 ProteinModelPortal:Q83AD8
GeneID:1209877 KEGG:cbu:CBU_1964 PATRIC:17932671
BioCyc:CBUR227377:GJ7S-1938-MONOMER Uniprot:Q83AD8
Length = 277
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 96/255 (37%), Positives = 142/255 (55%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL+ V + S +L E +L+ + L+ ++RR+ GEPIAYI+G+KEF+ L L
Sbjct: 25 DAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNL 84
Query: 371 NITSDVLIPRPETELLVDLIVKKT-FEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATD 429
+T DVLIPRPETE+LV+ I+K ++K+++ ++GTGSG + I ATD
Sbjct: 85 KVTPDVLIPRPETEMLVEWILKNLPKDEKLRIADLGTGSGAVALAIAV-ERPHWTIDATD 143
Query: 430 ISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLN 489
S N F W L ++ ++ IV NPPYIP D HL
Sbjct: 144 NSQAALKIAEINAKQHEIK-NC--NFYHGEWCQALP--RRDYHAIVGNPPYIPDKDQHLQ 198
Query: 490 KGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGF 549
+ L+ EP AL S+GLS+IK I+ A YLV G LL+EHGY+Q+ + L+ G+
Sbjct: 199 Q--LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGY 256
Query: 550 SDIKSWRDLSGIERV 564
+I RDL+G+ R+
Sbjct: 257 REITDRRDLAGLSRM 271
>TIGR_CMR|CBU_1964 [details] [associations]
symbol:CBU_1964 "protein methyltransferase HemK"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008168 "methyltransferase
activity" evidence=ISS] HAMAP:MF_02126 InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR007848 InterPro:IPR019874
Pfam:PF05175 GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008276 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 HSSP:Q9WYV8 KO:K02493 OMA:GRKGFWK
ProtClustDB:PRK09328 RefSeq:NP_820939.1 ProteinModelPortal:Q83AD8
GeneID:1209877 KEGG:cbu:CBU_1964 PATRIC:17932671
BioCyc:CBUR227377:GJ7S-1938-MONOMER Uniprot:Q83AD8
Length = 277
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 96/255 (37%), Positives = 142/255 (55%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL+ V + S +L E +L+ + L+ ++RR+ GEPIAYI+G+KEF+ L L
Sbjct: 25 DAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNL 84
Query: 371 NITSDVLIPRPETELLVDLIVKKT-FEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATD 429
+T DVLIPRPETE+LV+ I+K ++K+++ ++GTGSG + I ATD
Sbjct: 85 KVTPDVLIPRPETEMLVEWILKNLPKDEKLRIADLGTGSGAVALAIAV-ERPHWTIDATD 143
Query: 430 ISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLN 489
S N F W L ++ ++ IV NPPYIP D HL
Sbjct: 144 NSQAALKIAEINAKQHEIK-NC--NFYHGEWCQALP--RRDYHAIVGNPPYIPDKDQHLQ 198
Query: 490 KGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGF 549
+ L+ EP AL S+GLS+IK I+ A YLV G LL+EHGY+Q+ + L+ G+
Sbjct: 199 Q--LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGY 256
Query: 550 SDIKSWRDLSGIERV 564
+I RDL+G+ R+
Sbjct: 257 REITDRRDLAGLSRM 271
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 104/291 (35%), Positives = 168/291 (57%)
Query: 9 LEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEM 68
+EK RL+E+ L+ + + ++E S + ++ + +D+I E+
Sbjct: 25 IEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKELSIQLDDLIEMIEL 84
Query: 69 LN-DLEMRNFA-LD-EINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESA 125
+ D E L+ E+ L K++I E+E L + D + +EI++G GG ES
Sbjct: 85 ASKDHEEETMKDLERELLLLKEKIQKKEIEC----LFSGEADGNDCLLEIQSGAGGTESN 140
Query: 126 LFVNDLLRMYIRFSERNYWKFE--IISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHR 183
+ LLRMY R++E Y KF+ I+ + E G K +++G N Y + E+GVHR
Sbjct: 141 DWAMMLLRMYTRWAEI-YHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHR 199
Query: 184 VQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSA 243
+ R+ + + HTS + V P + +I+I+ DL+IDTYRASGAGGQH+NKT+SA
Sbjct: 200 LVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQHVNKTESA 259
Query: 244 VRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLR--EQQSNTAK 292
+RITH+P+ IVVQ Q+ RSQH+NKA A+++L +R+ + +LR E++ N A+
Sbjct: 260 IRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAAR 310
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 101/287 (35%), Positives = 158/287 (55%)
Query: 10 EKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKK-INE--DIITAK 66
+K RLK L L + ++ ++ K REH L ++ +++ + E D++
Sbjct: 136 KKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLA 195
Query: 67 EMLNDLEMRNFALDEINLAKKRIFDIELEIKKLILPKDKNDKRNIFIEIRAGTGGDESAL 126
+ ND E+ + L + + +R+ E E++ L L D ND + +IE++AG GG ES
Sbjct: 196 KEENDSELESETLKAL-IDMRRVSK-EKELEAL-LSAD-NDPCSCYIEVQAGAGGTESND 251
Query: 127 FVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQR 186
+ ++ MY +++R + ++ + EI G K ++ G Y K E GVHR+ R
Sbjct: 252 WAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVR 311
Query: 187 VPKTETQGRIHTSACTVAVIPE-ADEIEDININPADLRIDTYRASGAGGQHINKTDSAVR 245
+ ++ R HTS VAVIP D + IN +DLRI+ +R+ GAGGQH N TDSAVR
Sbjct: 312 ISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVR 371
Query: 246 ITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
I HIPTGI CQN+RSQH NKA A+ +L +R+ ++ Q + A+
Sbjct: 372 IVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQ 418
>TIGR_CMR|CPS_3551 [details] [associations]
symbol:CPS_3551 "modification methylase, HemK family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR007848 InterPro:IPR019874 Pfam:PF05175 PROSITE:PS00092
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG2890 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 GO:GO:0018364 GO:GO:0036009 KO:K02493
OMA:GRKGFWK RefSeq:YP_270225.1 ProteinModelPortal:Q47Y95 SMR:Q47Y95
STRING:Q47Y95 GeneID:3519534 KEGG:cps:CPS_3551 PATRIC:21470033
BioCyc:CPSY167879:GI48-3579-MONOMER Uniprot:Q47Y95
Length = 285
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 92/256 (35%), Positives = 142/256 (55%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ ILL +V L+ EK++ +Q L+QRRI+GEPIAYI+G +EF+ L
Sbjct: 27 DAQILLCFVLDKERSYLLTWPEKEVTEQSEQQYLALLQRRIMGEPIAYIVGVQEFWSLPF 86
Query: 371 NITSDVLIPRPETELLVDLIVKKTFE-KKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATD 429
++ LIPRP+TE+LV+L+++ E + L++GTG+G N +I A D
Sbjct: 87 RVSPATLIPRPDTEVLVELVLEHFGELDTLHCLDLGTGTGAIALALASEQPNW-QIDAID 145
Query: 430 ISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLN 489
S + + +S+W+N + N +K F++IV+NPPYI D HL+
Sbjct: 146 FSLDAVKLAKQNAQDLHLSH---VNIFQSDWFNAV-NERK-FDVIVSNPPYIDALDKHLS 200
Query: 490 KGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGF 549
+GD+R EP +AL GL IK I + A K+L +G L EHG+ Q VR +L G+
Sbjct: 201 QGDVRCEPESALVADEQGLGDIKHIAQQALKFLNTHGSLFFEHGFEQGQAVRNILTALGY 260
Query: 550 SDIKSWRDLSGIERVT 565
++++ RD +G ER+T
Sbjct: 261 DNVQTVRDFNGHERIT 276
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 79/170 (46%), Positives = 109/170 (64%)
Query: 134 MYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPK---T 190
MY F+ W FE+ + + +E GG R+ G V+ LKFE G HRVQR+P+ +
Sbjct: 4 MYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEVGLS 63
Query: 191 ETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIP 250
RIHT TV V+P+ +E+ DI+I P DLRIDT+R+ GAGGQH+N TDSAVR+ H+P
Sbjct: 64 SRMQRIHTGTMTVIVLPQMEEV-DIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVHLP 122
Query: 251 TGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGS 300
TG V +CQ RSQ KN+ AL++L AR+ + +Q+ T RRL +G+
Sbjct: 123 TGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGT 172
>UNIPROTKB|P0ACC1 [details] [associations]
symbol:prmC "protein-(glutamine-N5) methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0036009 "protein-glutamine
N-methyltransferase activity" evidence=IDA] [GO:0010468 "regulation
of gene expression" evidence=IMP] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IDA] [GO:0006415 "translational termination" evidence=IMP]
[GO:0018364 "peptidyl-glutamine methylation" evidence=IDA]
[GO:0008276 "protein methyltransferase activity" evidence=IDA]
[GO:0006479 "protein methylation" evidence=IDA] HAMAP:MF_02126
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR019874
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR025714
Pfam:PF13847 GO:GO:0010468 GO:GO:0006415 EMBL:U18555 eggNOG:COG2890
HOGENOM:HOG000076274 TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534
GO:GO:0018364 GO:GO:0036009 KO:K02493 ProtClustDB:PRK09328
EMBL:D28567 EMBL:AB078778 PIR:I83570 RefSeq:NP_415730.1
RefSeq:YP_489479.1 PDB:1T43 PDB:2B3T PDBsum:1T43 PDBsum:2B3T
ProteinModelPortal:P0ACC1 SMR:P0ACC1 IntAct:P0ACC1
EnsemblBacteria:EBESCT00000004101 EnsemblBacteria:EBESCT00000018086
GeneID:12931119 GeneID:945779 KEGG:ecj:Y75_p1184 KEGG:eco:b1212
PATRIC:32117676 EchoBASE:EB2323 EcoGene:EG12424 OMA:EHGWTQG
BioCyc:EcoCyc:EG12424-MONOMER BioCyc:ECOL316407:JW1203-MONOMER
BioCyc:MetaCyc:EG12424-MONOMER EvolutionaryTrace:P0ACC1
Genevestigator:P0ACC1 Uniprot:P0ACC1
Length = 277
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 94/275 (34%), Positives = 149/275 (54%)
Query: 295 RLLIGSVQ-KKSPLNIFETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILG 353
R I +Q +SP + ILL++VT ++ E +L ++ L+ L+ RR G
Sbjct: 8 REAISQLQASESPRR--DAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDG 65
Query: 354 EPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXX 413
EPIA++ G +EF+ L L ++ LIPRP+TE LV+ + + E+ ++L++GTG+G
Sbjct: 66 EPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIAL 125
Query: 414 XXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNI 473
+ EIIA D NI I ++S+W++ L + F +
Sbjct: 126 ALAS-ERPDCEIIAVD-RMPDAVSLAQRNAQHLAIKNIHI--LQSDWFSALAGQQ--FAM 179
Query: 474 IVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHG 533
IV+NPPYI + D HL +GD+RFEP+ AL +G++ I I++ + LV G LL+EHG
Sbjct: 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239
Query: 534 YNQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGK 568
+ Q VR+ G+ D+++ RD ERVT G+
Sbjct: 240 WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 98/302 (32%), Positives = 171/302 (56%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K +LS + + KEL+ +T+ E + D+ + + + + +L N K+++E
Sbjct: 8 LKSRILSDMVRLDIAAKELE--ITELESASASPDFWQD--QQNAQKAMKKLAAN-KRVSE 62
Query: 61 DIITAKEMLNDLEMRNFAL--DEINLA---KKRIFDIELEIKKL---ILPKDKNDKRNIF 112
++ +NDL + FAL ++ +L ++ + + EI L + + D RN
Sbjct: 63 VWRGLEQRVNDL-LELFALTHEDPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNAL 121
Query: 113 IEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ + AG GG ES + LLRM++R++E+ + E++ +S E G K +I G Y
Sbjct: 122 LTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAY 181
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LK E GVHR+ R+ + HTS V V+PEA++ DI+I P D++ID +R+SG
Sbjct: 182 GFLKSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGP 241
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQ++ K +AVR+THIP+GIVV Q +RSQH+N+ A++IL +++ ++ ++ AK
Sbjct: 242 GGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAK 301
Query: 293 MR 294
++
Sbjct: 302 IK 303
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 98/302 (32%), Positives = 171/302 (56%)
Query: 1 MKHLMLSKLEKFSKRLKELDFLLTQKEVHNNIKDYCKKVREHSFLYPIVELYNNYKKINE 60
+K +LS + + KEL+ +T+ E + D+ + + + + +L N K+++E
Sbjct: 8 LKSRILSDMVRLDIAAKELE--ITELESASASPDFWQD--QQNAQKAMKKLAAN-KRVSE 62
Query: 61 DIITAKEMLNDLEMRNFAL--DEINLA---KKRIFDIELEIKKL---ILPKDKNDKRNIF 112
++ +NDL + FAL ++ +L ++ + + EI L + + D RN
Sbjct: 63 VWRGLEQRVNDL-LELFALTHEDPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNAL 121
Query: 113 IEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVY 172
+ + AG GG ES + LLRM++R++E+ + E++ +S E G K +I G Y
Sbjct: 122 LTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAY 181
Query: 173 SKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGA 232
LK E GVHR+ R+ + HTS V V+PEA++ DI+I P D++ID +R+SG
Sbjct: 182 GFLKSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGP 241
Query: 233 GGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAK 292
GGQ++ K +AVR+THIP+GIVV Q +RSQH+N+ A++IL +++ ++ ++ AK
Sbjct: 242 GGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAK 301
Query: 293 MR 294
++
Sbjct: 302 IK 303
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 78/129 (60%), Positives = 94/129 (72%)
Query: 150 SRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEA 209
S SL GG + A I G Y +KFE GVHRVQRVPKTE QGR+HTS TVA++P+
Sbjct: 32 SISLYFQGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQP 91
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
EI ++ INP DLRIDT RASGAGGQH+N TDSAVRI H+PTG+V +CQ +RSQ KNK
Sbjct: 92 TEI-NLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKEL 150
Query: 270 ALKILLARI 278
A+ L A++
Sbjct: 151 AMTKLRAKL 159
>TIGR_CMR|VC_2178 [details] [associations]
symbol:VC_2178 "hemK protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0006306 "DNA methylation" evidence=ISS]
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] [GO:0009007 "site-specific
DNA-methyltransferase (adenine-specific) activity" evidence=ISS]
HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0008276 eggNOG:COG2890 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 KO:K02493 OMA:GRKGFWK ProtClustDB:PRK09328
PIR:A82109 RefSeq:NP_231809.1 ProteinModelPortal:Q9KQ26 SMR:Q9KQ26
DNASU:2613314 GeneID:2613314 KEGG:vch:VC2178 PATRIC:20083369
Uniprot:Q9KQ26
Length = 286
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 92/267 (34%), Positives = 144/267 (53%)
Query: 302 QKKSPLNIFETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIG 361
Q S + +LL +V L+ +K L K + L L+ RR GEP+AYI+G
Sbjct: 18 QSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILG 77
Query: 362 KKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKN 421
++EF+ L L ++ LIPRP+TE LV+L + K +LL++GTG+G
Sbjct: 78 EREFWSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDLGTGTGAIALALASELPT 137
Query: 422 KIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYI 481
+ ++ D+ +N +F + +W++ L + K F +IV+NPPYI
Sbjct: 138 R-QVTGIDLRPEAAELARENATRLAI-HNA--QFFQGSWFSPLADGTK-FALIVSNPPYI 192
Query: 482 PKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVR 541
+ D HL+ GD+RFEP +AL NGL+ I+ I +A +L+ G LL EHGY+Q VR
Sbjct: 193 EENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVR 252
Query: 542 KLLFKYGFSDIKSWRDLSGIERVTQGK 568
+L G+ +I + +D +G +RVT G+
Sbjct: 253 TILRDLGYQNIITEQDYAGHDRVTLGQ 279
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 78/199 (39%), Positives = 122/199 (61%)
Query: 91 DIEL-EIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEII 149
DIE E++ L+ + D+R + IR+G GG ++A + L+RMYIR++E++ + E+
Sbjct: 110 DIEATEVRTLL--SGEYDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVF 167
Query: 150 SRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEA 209
S +E G K + Y L E G HR+ R+ + Q R TS V V+P
Sbjct: 168 DTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVV 227
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
+ + I+I D+R+D YR+SG GGQ +N TDSAVR+THIP+GIVV CQN++SQ +NK
Sbjct: 228 ETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIA 287
Query: 270 ALKILLARIKDSKLREQQS 288
A+++L A++ + K E+++
Sbjct: 288 AMRVLQAKLLERKRLEERA 306
>UNIPROTKB|Q8EAR4 [details] [associations]
symbol:prmC "Release factor glutamine methyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008276 InterPro:IPR025714
Pfam:PF13847 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 HSSP:Q9WYV8 KO:K02493 OMA:GRKGFWK
ProtClustDB:PRK09328 RefSeq:NP_719365.1 ProteinModelPortal:Q8EAR4
GeneID:1171477 KEGG:son:SO_3832 PATRIC:23527350 Uniprot:Q8EAR4
Length = 286
Score = 375 (137.1 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 81/258 (31%), Positives = 137/258 (53%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL Y + L EK L ++ +++QRR G P+A+I+G++EF+ L
Sbjct: 28 DAEVLLLYCLNKNRAYLYTWPEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87
Query: 371 NITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDI 430
+ LIPRP+TE+LV+ + E K+L++GTG+G + +I A D
Sbjct: 88 IVNDTTLIPRPDTEILVESALNLPLESNAKVLDLGTGTGAIALALAS-ERAAWQITAVDK 146
Query: 431 SXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNK 490
++ ++S+W++ + ++ F++IV+NPPYI + D HL++
Sbjct: 147 VEDAVALAKANRTNLKLEQ---VEILQSDWFSAVTSHD--FDLIVSNPPYIDEADEHLHQ 201
Query: 491 GDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFS 550
GD+RFEP +ALT G + + I K A YL NG +L+EHG+ Q+ +R L + G+
Sbjct: 202 GDVRFEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIELGYQ 261
Query: 551 DIKSWRDLSGIERVTQGK 568
++ + RD +R T GK
Sbjct: 262 NVATVRDFGSNDRCTMGK 279
>TIGR_CMR|SO_3832 [details] [associations]
symbol:SO_3832 "hemK family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008276 InterPro:IPR025714
Pfam:PF13847 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 HSSP:Q9WYV8 KO:K02493 OMA:GRKGFWK
ProtClustDB:PRK09328 RefSeq:NP_719365.1 ProteinModelPortal:Q8EAR4
GeneID:1171477 KEGG:son:SO_3832 PATRIC:23527350 Uniprot:Q8EAR4
Length = 286
Score = 375 (137.1 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 81/258 (31%), Positives = 137/258 (53%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL Y + L EK L ++ +++QRR G P+A+I+G++EF+ L
Sbjct: 28 DAEVLLLYCLNKNRAYLYTWPEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87
Query: 371 NITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDI 430
+ LIPRP+TE+LV+ + E K+L++GTG+G + +I A D
Sbjct: 88 IVNDTTLIPRPDTEILVESALNLPLESNAKVLDLGTGTGAIALALAS-ERAAWQITAVDK 146
Query: 431 SXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNK 490
++ ++S+W++ + ++ F++IV+NPPYI + D HL++
Sbjct: 147 VEDAVALAKANRTNLKLEQ---VEILQSDWFSAVTSHD--FDLIVSNPPYIDEADEHLHQ 201
Query: 491 GDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFS 550
GD+RFEP +ALT G + + I K A YL NG +L+EHG+ Q+ +R L + G+
Sbjct: 202 GDVRFEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIELGYQ 261
Query: 551 DIKSWRDLSGIERVTQGK 568
++ + RD +R T GK
Sbjct: 262 NVATVRDFGSNDRCTMGK 279
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 374 (136.7 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 84/241 (34%), Positives = 138/241 (57%)
Query: 73 EMRNFALDEINLAKKRIFDIEL-EIKKLILPKDKNDKRN-IFIEIRAGTGGDESALFVND 130
EMR A ++ ++ + + EL E+ I+P + D + IE+ G GG E+ LF +
Sbjct: 99 EMRKLAEVDVESIEENL-ETELQELAVKIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGE 157
Query: 131 LLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKT 190
LL MY + + N WK++ + +GG + + + G VY+K++FE+GVHRVQRVP
Sbjct: 158 LLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVN 217
Query: 191 ETQGRIHTSACTVAVIPEADEIEDININPAD-LRIDTYRASGAGGQHINKTDSAVRITHI 249
++ R+HTS +++V+PE +E+ + P+D ++I+ RASG GGQ++NK +AVR+TH
Sbjct: 218 DS--RMHTSTASISVLPEPEEVSVVV--PSDSVKIEAMRASGPGGQNVNKRSTAVRMTHK 273
Query: 250 PTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNI 309
TGI V C ++R QH N A K L A + ++ R+L +GS + +
Sbjct: 274 ETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAMLEKIVSKRKLQVGSKARAEKIRT 333
Query: 310 F 310
+
Sbjct: 334 Y 334
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 351 (128.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 88/240 (36%), Positives = 133/240 (55%)
Query: 106 NDKRN-IFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISR-SLSEIGGYKEII 163
ND +N I IE R G GG+E+ + +LL Y F+ERN K E I S S + KE +
Sbjct: 60 NDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENL 119
Query: 164 ARI-----IGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININ 218
I I +N+Y K ESG+H+V+R+PK +++ RIH+S TVA+ E IN
Sbjct: 120 RIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEIN 179
Query: 219 PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI 278
DL+I T+R+S GGQ++NK +S V I H PTGI +CQ +R+Q NK A+K L+ +I
Sbjct: 180 LKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKI 239
Query: 279 KDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNILLKYVT---RLSDVELIINNEKKL 335
+ + +E+++ R LI + + + + N Y+T ++LI + KL
Sbjct: 240 QHMESKEKENMVQHERAKLIKESNRSNRIRTY--NFFRGYITDHINKKKIDLIYFEKGKL 297
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 351 (128.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 88/240 (36%), Positives = 133/240 (55%)
Query: 106 NDKRN-IFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISR-SLSEIGGYKEII 163
ND +N I IE R G GG+E+ + +LL Y F+ERN K E I S S + KE +
Sbjct: 60 NDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENL 119
Query: 164 ARI-----IGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDININ 218
I I +N+Y K ESG+H+V+R+PK +++ RIH+S TVA+ E IN
Sbjct: 120 RIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEIN 179
Query: 219 PADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARI 278
DL+I T+R+S GGQ++NK +S V I H PTGI +CQ +R+Q NK A+K L+ +I
Sbjct: 180 LKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKI 239
Query: 279 KDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNILLKYVT---RLSDVELIINNEKKL 335
+ + +E+++ R LI + + + + N Y+T ++LI + KL
Sbjct: 240 QHMESKEKENMVQHERAKLIKESNRSNRIRTY--NFFRGYITDHINKKKIDLIYFEKGKL 297
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 307 (113.1 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 81/246 (32%), Positives = 129/246 (52%)
Query: 49 VELYNNYKKINEDIITAKEMLNDLEMRNFALDE--INLAKKRIFDIE-LEIKKLILPKDK 105
+ L + +K + ED T ++ +++ + +L E + + K+ ++ E+ +L+
Sbjct: 144 MRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLL--SGP 201
Query: 106 NDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRSLSEIGGYKEIIAR 165
DK + I AG GG ++ + + LLRMY+R+ E+ +K +++ S E G K
Sbjct: 202 YDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLE 261
Query: 166 IIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEA-DEIEDININPADLRI 224
I G Y + E G HR+ R ++G TS V V+P +E I I DL I
Sbjct: 262 IEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDI 321
Query: 225 DTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLR 284
RA G GGQ++NK ++AVRITHIPTG+ V+C +RSQ NK AL L A++ +
Sbjct: 322 SFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLM--VIA 379
Query: 285 EQQSNT 290
E+Q T
Sbjct: 380 EEQRAT 385
>TIGR_CMR|GSU_3103 [details] [associations]
symbol:GSU_3103 "modification methylase, HemK family"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006306 "DNA
methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] HAMAP:MF_02126
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR019874
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008276
HOGENOM:HOG000076274 TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534
KO:K02493 OMA:GRKGFWK ProtClustDB:PRK09328 RefSeq:NP_954144.1
ProteinModelPortal:Q748B2 GeneID:2688466 KEGG:gsu:GSU3103
PATRIC:22029061 BioCyc:GSUL243231:GH27-3085-MONOMER Uniprot:Q748B2
Length = 284
Score = 291 (107.5 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 81/273 (29%), Positives = 136/273 (49%)
Query: 299 GSVQKKSPLNI-FETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIA 357
G + +K N ET LL L V L +N +K L+ +E+ L+ RR EP+
Sbjct: 19 GYLAEKGVENARLETEWLLSAALGLDRVGLYVNFDKPLNPEELAACRGLVARRAKREPLQ 78
Query: 358 YIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXX 417
YI+G +EF GL +T VLIPR +TE++V+ +++ +L++G GSG
Sbjct: 79 YILGTQEFCGLDFVVTPSVLIPRHDTEVIVEEALRRA-PHAAAVLDIGVGSGCIAVALAK 137
Query: 418 YSKNKIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVAN 477
+ +++ + S + + + + + L + + F++IV+N
Sbjct: 138 QLPHA-QVVGVEQSPGAIALAQRNAER----HGARVTLFEGSLFEPLGDQR--FDLIVSN 190
Query: 478 PPYIPKGDIHLNKGDLR-FEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQ 536
PPYIP D+ + ++R +EP AL S+GL + IV A +YL G L++E G Q
Sbjct: 191 PPYIPTADLEALQPEVREYEPRAALDGGSDGLDFYRLIVPAAPEYLNPGGWLMVELGIGQ 250
Query: 537 SNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKI 569
+ V + + GF D + +D +GI+RV G+I
Sbjct: 251 AETVLGMFSRTGFCDCFTAQDPNGIDRVVGGRI 283
>TIGR_CMR|DET_1211 [details] [associations]
symbol:DET_1211 "modification methylase, HemK family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006306 "DNA
methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] HAMAP:MF_02126
InterPro:IPR004556 InterPro:IPR019874 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG2890 HOGENOM:HOG000076274
TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534 GO:GO:0018364 GO:GO:0036009
KO:K02493 ProtClustDB:PRK09328 OMA:FAILEIG RefSeq:YP_181924.1
ProteinModelPortal:Q3Z775 STRING:Q3Z775 GeneID:3229488
KEGG:det:DET1211 PATRIC:21609457
BioCyc:DETH243164:GJNF-1212-MONOMER Uniprot:Q3Z775
Length = 277
Score = 274 (101.5 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 77/257 (29%), Positives = 130/257 (50%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
E ILL++ +S V+L + E++LH + + ++RR+ GEP AYI G KEFYG
Sbjct: 25 EAEILLRHTLGISRVQLHLELERELHPDKEAAYFQTLKRRLEGEPSAYITGAKEFYGRAF 84
Query: 371 NITSDVLIPRPETELLVD--LIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIAT 428
+ VLIPRPETE L++ L + +++E + ++GTGSG K+ + AT
Sbjct: 85 QVDKRVLIPRPETEHLIEKALRIARSYESPY-IADIGTGSGAIAITLALELKDAY-VYAT 142
Query: 429 DISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHL 488
DIS + F + + L++ ++ +I++AN PY+P + L
Sbjct: 143 DISAEALEVARNNAAEYRLEKRL--MFYRGDL---LESLPEMVDILMANLPYVPTAEAGL 197
Query: 489 NKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKY- 547
KG EP++AL ++GL + ++ L G L+E G +QS ++ + +Y
Sbjct: 198 LKG----EPVSALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLANYIKEYL 253
Query: 548 GFSDIKSWRDLSGIERV 564
+ ++ D +GI RV
Sbjct: 254 PQAAVEISPDYAGIPRV 270
>TIGR_CMR|SPO_2460 [details] [associations]
symbol:SPO_2460 "modification methylase, HemK family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR002296
InterPro:IPR004556 InterPro:IPR019874 PRINTS:PR00507
PROSITE:PS00092 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003676 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 GO:GO:0018364 GO:GO:0036009 KO:K02493
OMA:GRKGFWK ProtClustDB:PRK09328 RefSeq:YP_167677.1
ProteinModelPortal:Q5LQM8 GeneID:3193801 KEGG:sil:SPO2460
PATRIC:23378319 Uniprot:Q5LQM8
Length = 271
Score = 266 (98.7 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 69/255 (27%), Positives = 123/255 (48%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL + R+ + + + L + ++LI R + P+++++G+++FYG
Sbjct: 19 DARLLLAHAARIEASRVTLIAPEDLAPEIAERYDQLISLRAVRVPVSHLVGERDFYGRRF 78
Query: 371 NITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDI 430
++ +VL PRPETE L++ + FE +L++G GSG + + D+
Sbjct: 79 KVSGEVLDPRPETETLIEAALNAPFEH---VLDLGVGSGAILVTLLA-ERPSATGLGVDL 134
Query: 431 SXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNK 490
S I+ +S+W+ ++ F++IV+NPPYI ++
Sbjct: 135 SEAACLQASANAVLHRVEARADIR--RSDWFGAVEGR---FDLIVSNPPYIALSEMEALA 189
Query: 491 GDLR-FEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGF 549
++R EP ALTD +GL + + I A YL+ G LL+E G Q+ V +L G
Sbjct: 190 PEVRRHEPELALTDGGDGLGAYRHIAAGAPDYLLPGGRLLVEIGPTQAQAVSRLFQAAGL 249
Query: 550 SDIKSWRDLSGIERV 564
S ++ DL G +RV
Sbjct: 250 SGLRVIPDLDGRDRV 264
>TIGR_CMR|NSE_0128 [details] [associations]
symbol:NSE_0128 "modification methylase, HemK family"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006306
"DNA methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR002052 InterPro:IPR004556 PROSITE:PS00092
GO:GO:0003676 GO:GO:0008276 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG2890 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536 KO:K02493
OMA:GRKGFWK ProtClustDB:PRK09328 RefSeq:YP_506028.1
ProteinModelPortal:Q2GER8 STRING:Q2GER8 GeneID:3932309
KEGG:nse:NSE_0128 PATRIC:22680361
BioCyc:NSEN222891:GHFU-164-MONOMER Uniprot:Q2GER8
Length = 289
Score = 244 (91.0 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 80/288 (27%), Positives = 139/288 (48%)
Query: 282 KLREQQSNTAKMRRLLIGS--VQKKSPLNIFETNILLKYVTRLSDVELIIN-NEKKLHKQ 338
K ++ S+ + RL+ GS + S + +LL +V L+ +LI+ NE Q
Sbjct: 5 KEKDYDSDMSIRARLIAGSRYLANWSSTPHLDAELLLAHVLSLNREQLILYCNEGMTDSQ 64
Query: 339 EINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETE-LLVDLIVK-KTFE 396
++ L++ R +A I+G+KEF+ + DVLIPRP+TE +LV L+ + K
Sbjct: 65 AMDF-EMLLKLR-KSHSVAAIVGEKEFWKHSFAVNKDVLIPRPDTETMLVALLSRYKKLT 122
Query: 397 KKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFI 456
+ +K++E+GTGSG +N + +K
Sbjct: 123 QPLKIVELGTGSGCVIISILKEFRNALGF---GFEKSRAAFYLTMHNMLKYGLRARLKLY 179
Query: 457 KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516
+ + + ++ ++IV+NPPY+ +G+I + +++ EP AL NG+ I+K
Sbjct: 180 RLGFESAMRVLSCKVDVIVSNPPYVRRGEIPYLQLEVQNEPRIALDGGFNGILPYFSILK 239
Query: 517 NASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERV 564
ASK L G + +E G + + V + Y F ++ +RDLSGIER+
Sbjct: 240 LASKILRPGGEIFLEIGSSWRDSV--VSANYPFKIVERYRDLSGIERI 285
>TIGR_CMR|BA_5571 [details] [associations]
symbol:BA_5571 "modification methylase, HemK family"
species:198094 "Bacillus anthracis str. Ames" [GO:0006306 "DNA
methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] HAMAP:MF_02126
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR019874
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
GO:GO:0008276 InterPro:IPR025714 Pfam:PF13847 HOGENOM:HOG000076274
TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534 HSSP:Q9WYV8
RefSeq:NP_847728.1 RefSeq:YP_022239.1 RefSeq:YP_031416.1
ProteinModelPortal:Q81JX2 DNASU:1085260
EnsemblBacteria:EBBACT00000008560 EnsemblBacteria:EBBACT00000015976
EnsemblBacteria:EBBACT00000024167 GeneID:1085260 GeneID:2816826
GeneID:2852041 KEGG:ban:BA_5571 KEGG:bar:GBAA_5571 KEGG:bat:BAS5177
KO:K02493 OMA:GRKGFWK ProtClustDB:PRK09328
BioCyc:BANT260799:GJAJ-5252-MONOMER
BioCyc:BANT261594:GJ7F-5431-MONOMER Uniprot:Q81JX2
Length = 283
Score = 233 (87.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 69/262 (26%), Positives = 128/262 (48%)
Query: 314 ILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNIT 373
I+L +V + + L++N +++ ++ + I + + G PI Y+IG + FYG +
Sbjct: 26 IVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVN 85
Query: 374 SDVLIPRPETE-LLVDLI--VKKTF-EKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATD 429
+VLIPRPETE L+V ++ +++ F ++K+ + ++GTGSG +KN + + D
Sbjct: 86 EEVLIPRPETEELIVGVLERIERHFGDEKLHVADIGTGSGAISITLALENKN-LHVYTVD 144
Query: 430 ISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIH-L 488
I+ + S +Y Q KL +++V+NPPYIP+ D L
Sbjct: 145 IAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQ---KL-DVVVSNPPYIPEEDWRGL 200
Query: 489 NKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFK-Y 547
+ EP AL +GL + ++ L K ++ E G Q V+ LL + +
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAF 260
Query: 548 GFSDIKSWRDLSGIERVTQGKI 569
+ ++ D++G +R+ +I
Sbjct: 261 PHAHVEVVFDINGKDRMVFAEI 282
>TAIR|locus:2164396 [details] [associations]
symbol:AT5G64150 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=ISS] [GO:0006479 "protein
methylation" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008276 "protein methyltransferase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0032259
"methylation" evidence=IEA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR002052 InterPro:IPR004556 PROSITE:PS00092
EMBL:CP002688 GO:GO:0003676 GO:GO:0008276 TIGRFAMs:TIGR00536
EMBL:AB008266 HSSP:Q9WYV8 UniGene:At.8462 EMBL:AY054582
EMBL:BT008475 IPI:IPI00535760 RefSeq:NP_201220.1 UniGene:At.8461
ProteinModelPortal:Q9FMI5 SMR:Q9FMI5 STRING:Q9FMI5 PRIDE:Q9FMI5
EnsemblPlants:AT5G64150.1 GeneID:836536 KEGG:ath:AT5G64150
TAIR:At5g64150 InParanoid:Q9FMI5 OMA:GRWADLG PhylomeDB:Q9FMI5
ProtClustDB:CLSN2686240 Genevestigator:Q9FMI5 Uniprot:Q9FMI5
Length = 377
Score = 247 (92.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 81/272 (29%), Positives = 130/272 (47%)
Query: 309 IFETNILLKYVTRLSDVELIINNEKKLH-KQEINILNKLIQRRI-LGEPIAYIIGKKEFY 366
+ E +I+ + L E+ N EK + + + L L ++RI P Y++G + +
Sbjct: 106 LIEDSIVDDPLVILHRSEIADNGEKNVKLRASLEELYDLWRQRIEKRRPFQYVVGCEHWR 165
Query: 367 GLVLNITSDVLIPRPETELLVD----LIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNK 422
LVL + VLIPRPETEL+VD L+ + + KK ++GTGSG ++
Sbjct: 166 DLVLCVEEGVLIPRPETELIVDMVEELVTRDEWFKKDIWADLGTGSGAIAIGIAKVLGSR 225
Query: 423 IEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYK-KLFNIIVANPPYI 481
+IATD+S I ++ + +W+ L++ + KL + V+NPPYI
Sbjct: 226 GRVIATDLSPVAIAVAGHNVQRYSLEGMIEVR--EGSWFEPLKDLEGKLVGL-VSNPPYI 282
Query: 482 PKGDIHLNKGDL-RFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIE-HGYNQSNL 539
P DI + ++ R EP AL +G S+ + AS+ L G + E +G QS +
Sbjct: 283 PSDDIPGLQAEVGRHEPKLALDGGIDGTDSLFHLCHGASRMLQPGGFFVFETNGEKQSKM 342
Query: 540 VRKLLF----KYGFSDIKSWRDLSGIERVTQG 567
+ + K FSD+K D +GI R G
Sbjct: 343 IVDYMMTSDLKDCFSDLKIVSDFAGINRFVTG 374
>TIGR_CMR|ECH_1063 [details] [associations]
symbol:ECH_1063 "modification methylase, HemK family"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006306
"DNA methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 PROSITE:PS00092 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003676 GO:GO:0008276
eggNOG:COG2890 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 KO:K02493 ProtClustDB:PRK09328
RefSeq:YP_507848.1 ProteinModelPortal:Q2GFD5 STRING:Q2GFD5
GeneID:3927380 KEGG:ech:ECH_1063 PATRIC:20577476 OMA:FAILEIG
BioCyc:ECHA205920:GJNR-1066-MONOMER Uniprot:Q2GFD5
Length = 280
Score = 227 (85.0 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 65/253 (25%), Positives = 124/253 (49%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ I++K++ ++ I++ ++K ++ + K++++R PI++IIGK+EF+
Sbjct: 26 DVEIIIKHLINTENLVTILDPHMPINKCDVEVFWKMVKQRSTNIPISHIIGKREFWSTDF 85
Query: 371 NITSDVLIPRPETELLVDLIVKKTFEKKIKLL--EMGTGSGXXXXXXXXYSKNKIEIIAT 428
+ SDVL PRP++E ++ + K +L+ + GTGSG +N + I A
Sbjct: 86 IVNSDVLDPRPDSETIISSVFAMYPCKNRRLIIGDFGTGSGCLLSILLLRYRNAVGI-AI 144
Query: 429 DISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHL 488
+ S I ++ S+W N + F++IV+NPPYI + I
Sbjct: 145 EKSVKAYRVAYQNFKNHGLYSRIKMRL--SSW-NTCYD---TFDLIVSNPPYIRRSKITT 198
Query: 489 NKGDLRF-EPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKY 547
+ +++ EP+ AL GL +I + L +NG+ ++E G +Q + +++ +Y
Sbjct: 199 LQPEVKLHEPMVALDGGPIGLEIYSQIFVIIKRCLKQNGVAILEIGEDQHQ-IHRIVHRY 257
Query: 548 GFSDIKSWRDLSG 560
G DLSG
Sbjct: 258 GLKFCTYHNDLSG 270
>TIGR_CMR|CHY_2562 [details] [associations]
symbol:CHY_2562 "modification methylase, HemK family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006306 "DNA methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] HAMAP:MF_02126
InterPro:IPR004556 InterPro:IPR019874 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG2890 HOGENOM:HOG000076274
TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534 GO:GO:0018364 GO:GO:0036009
KO:K02493 OMA:FAILEIG RefSeq:YP_361355.1 ProteinModelPortal:Q3A929
STRING:Q3A929 GeneID:3726765 KEGG:chy:CHY_2562 PATRIC:21278173
BioCyc:CHYD246194:GJCN-2561-MONOMER Uniprot:Q3A929
Length = 285
Score = 172 (65.6 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ +LL +V +S V + E+ L + E ++RR P+AY+IGKKEFYGL
Sbjct: 27 DAELLLAHVLGISRVAIYTRPERVLSEYEWERFVDHVERRASRIPLAYLIGKKEFYGLDF 86
Query: 371 NITSDVLIPRPETELLVDLIVKKTFEKK-IKLL-EMGTGSG 409
+T +VLIPRPETEL+V+ + + + +KL+ ++GTGSG
Sbjct: 87 FVTPEVLIPRPETELMVEEGINFLRQYRGLKLVADVGTGSG 127
Score = 102 (41.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 471 FNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530
F++I AN PYIP ++ +++ EP AL +GL + ++ A K L ++G++L+
Sbjct: 188 FSLITANLPYIPTEELSTLMPEVQKEPQIALDGGEDGLMLYRRLLPEAHKLLAEDGVMLL 247
Query: 531 EHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERV 564
E Q + K +IK +DL+G +R+
Sbjct: 248 EIAPYQGKAITAEAEKLYRVEIK--KDLAGHDRL 279
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 147 (56.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
+++ D IN +DL I T R+ G GGQ++NK ++AVRI H PT I V+ ++R+Q NK
Sbjct: 214 NKMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRN 273
Query: 270 ALKILLARI 278
ALK + ++
Sbjct: 274 ALKRIYEKL 282
Score = 128 (50.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 108 KRNIFIEIRAGTGGDESALFVNDLLRMYIRF----SERNYWKFEIISRSLSEIGGYKEII 163
K + + + +GTGG E+ F N L MYI++ R K+E+I S +E+G K++
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEVG-IKKVE 107
Query: 164 ARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDINI 217
+I G + E G+HR+ R Q + TS V VIP + D+N+
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLN-FNDLNV 160
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 147 (56.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
+++ D IN +DL I T R+ G GGQ++NK ++AVRI H PT I V+ ++R+Q NK
Sbjct: 214 NKMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRN 273
Query: 270 ALKILLARI 278
ALK + ++
Sbjct: 274 ALKRIYEKL 282
Score = 128 (50.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 108 KRNIFIEIRAGTGGDESALFVNDLLRMYIRF----SERNYWKFEIISRSLSEIGGYKEII 163
K + + + +GTGG E+ F N L MYI++ R K+E+I S +E+G K++
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEVG-IKKVE 107
Query: 164 ARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEIEDINI 217
+I G + E G+HR+ R Q + TS V VIP + D+N+
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLN-FNDLNV 160
>DICTYBASE|DDB_G0278505 [details] [associations]
symbol:DDB_G0278505 "HemK family methyltransferase"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002052 InterPro:IPR019874 PROSITE:PS00092
dictyBase:DDB_G0278505 EMBL:AAFI02000023 GO:GO:0003676
GO:GO:0008168 eggNOG:COG2890 TIGRFAMs:TIGR03534 RefSeq:XP_642405.1
ProteinModelPortal:Q54XZ7 STRING:Q54XZ7 EnsemblProtists:DDB0205497
GeneID:8621610 KEGG:ddi:DDB_G0278505 InParanoid:Q54XZ7 OMA:FFRMIRA
ProtClustDB:CLSZ2846845 Uniprot:Q54XZ7
Length = 343
Score = 151 (58.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 38/124 (30%), Positives = 73/124 (58%)
Query: 295 RLLIGSVQKKSPLNIFETNILLKYVTRLSDV--ELIINNEKK----LHKQEINILNKLIQ 348
+LL + + S + E+ +L+ +V +++D + + N+K + +E N L I+
Sbjct: 30 KLLKSNNELISNYSELESKLLVSHVLKINDHNDQYQLFNKKVQSRIISNEEYNQLQSFIE 89
Query: 349 RRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKL---LEMG 405
RR+ EPI YIIG + F+ LIPRP++E +++ I++++ EK++K+ L++G
Sbjct: 90 RRLNNEPINYIIGYRYFWKNKFFCNHSTLIPRPDSETIIEKIIEESKEKELKIKKILDLG 149
Query: 406 TGSG 409
TG+G
Sbjct: 150 TGTG 153
Score = 118 (46.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 462 NNLQNYKKLFNIIVANPPYIPKGDI-HLNKGDLRFEPINALTDYSNGLSSIKEIV----K 516
NN N K F+++++NPPYI + +LN +EP AL NGL K I +
Sbjct: 228 NNENNEK--FDLVISNPPYISNEEFKYLNPIVTEWEPKTALIADENGLKDYKSIASFLNE 285
Query: 517 NASKYLVKNGLLLIEHGYNQSNLVRKLLF-KYGFSDIKSWRDLSGIER 563
N L N L++ E G Q ++ ++ KY F I +DL+ I R
Sbjct: 286 NKDSLLSDNCLIVFEIGKGQEKDIQSIMENKYSFKYIGYKKDLNSIIR 333
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/89 (19%), Positives = 39/89 (43%)
Query: 28 VHNNIKDYCKKVREHSFLYPIVELYNNYKKINEDIITAKEMLNDLEMRNFALDEINLAKK 87
+H + + YC K+ + L + + K N ++I+ L + + L +IN
Sbjct: 4 IHLSKRFYCNKIINKNVLEILKDTKEKLLKSNNELISNYSELESKLLVSHVL-KINDHND 62
Query: 88 RIFDIELEIKKLILPKDKNDKRNIFIEIR 116
+ +++ I+ ++ ++ FIE R
Sbjct: 63 QYQLFNKKVQSRIISNEEYNQLQSFIERR 91
>TIGR_CMR|CJE_0822 [details] [associations]
symbol:CJE_0822 "modification methylase, HemK family"
species:195099 "Campylobacter jejuni RM1221" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0008170 "N-methyltransferase activity"
evidence=ISS] InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR007848 Pfam:PF05175 PROSITE:PS00092 GO:GO:0003676
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008276
eggNOG:COG2890 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536 KO:K02493
ProtClustDB:PRK09328 RefSeq:YP_178826.1 ProteinModelPortal:Q5HV59
STRING:Q5HV59 GeneID:3230772 KEGG:cjr:CJE0822 PATRIC:20043389
OMA:YIARGYP BioCyc:CJEJ195099:GJC0-837-MONOMER Uniprot:Q5HV59
Length = 271
Score = 195 (73.7 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 77/280 (27%), Positives = 124/280 (44%)
Query: 301 VQKKSPLNIFETN---ILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIA 357
++ KS L +E IL +Y+ + L +N + ++ + KLI+R GEP
Sbjct: 8 MEAKSSLKGYENEAVFILCEYLKK-DKAWLFLNQDIQIDHEPYF---KLIRRFKSGEPFE 63
Query: 358 YIIGKKEFYGLVLNITSDVLIPRPETELLV----DLIVKKTFEKKIKLLEMGTGSGXXXX 413
YI K +F+GL I +LIPR ++E+L+ +L K TF +LE+G GSG
Sbjct: 64 YIFEKVDFWGLEFKIKKGILIPRYDSEILLFQILNLCKKNTFNG---ILEIGFGSGILSI 120
Query: 414 XXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNI 473
+ ++I A DI+ + I K N + K+ ++
Sbjct: 121 ILA--KELGLKITACDINLKALELALENAKLHKVDHLIDFKLC------NFKQIKENYDF 172
Query: 474 IVANPPYIPKG---DIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530
I +NPPYI DI + K EP AL G ++EI+ + VK L
Sbjct: 173 IFSNPPYIKNSYPIDIWVQK-----EPKEALFGGEKGYEILEEIIHFSLDKKVK--FLAC 225
Query: 531 EHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIERVTQGKIS 570
E GY+Q ++ K+L++ F + ++D G R K +
Sbjct: 226 EFGYDQKEILEKILYQNNFI-VDFFKDEQGYNRAFVAKFT 264
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 180 (68.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFA---L 271
++I AD++++ YRASG GGQH N TDSAVRI H+PTGIVVQ RSQ +N+ A L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 272 KILLARIKDSKLREQQSNT----AKMRRL----LIGSVQK 303
+I L + ++ K +++ + T A+ +RL L+G +K
Sbjct: 63 RIALEK-RERKAKKRIATTVPRGAREKRLTEKKLVGMKKK 101
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 180 (68.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFA---L 271
++I AD++++ YRASG GGQH N TDSAVRI H+PTGIVVQ RSQ +N+ A L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 272 KILLARIKDSKLREQQSNT----AKMRRL----LIGSVQK 303
+I L + ++ K +++ + T A+ +RL L+G +K
Sbjct: 63 RIALEK-RERKAKKRIATTVPRGAREKRLTEKKLVGMKKK 101
>TIGR_CMR|APH_1200 [details] [associations]
symbol:APH_1200 "modification methylase, HemK family"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006306 "DNA
methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR019874 PROSITE:PS00092 GO:GO:0003676
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008276
eggNOG:COG2890 HOGENOM:HOG000076274 TIGRFAMs:TIGR00536
TIGRFAMs:TIGR03534 KO:K02493 ProtClustDB:PRK09328 OMA:FAILEIG
RefSeq:YP_505733.1 ProteinModelPortal:Q2GIR8 STRING:Q2GIR8
GeneID:3930238 KEGG:aph:APH_1200 PATRIC:20951182
BioCyc:APHA212042:GHPM-1205-MONOMER Uniprot:Q2GIR8
Length = 282
Score = 192 (72.6 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 57/240 (23%), Positives = 118/240 (49%)
Query: 311 ETNILLKYVTRLSDVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVL 370
+ ++ +V LS+ E++IN + + + ++I RR+ G P+++I+ ++EF+ +
Sbjct: 28 DARLIAGHVLGLSEHEVLINPDLVVTAAKTKEFFEVIARRLAGVPVSHILRRREFWSIDF 87
Query: 371 NITSDVLIPRPETELLVDLIVK-KTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATD 429
+ DVL PR +TE ++ +K ++I + ++GTG+ + KN + + A +
Sbjct: 88 AVGPDVLDPRQDTETIISEAIKLHNRNRRITIADLGTGTACIIIALLSHYKNAVGV-AFE 146
Query: 430 ISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLN 489
S + + +++W N K F++IV+NPPYI + I
Sbjct: 147 KSTKAYRIAHQNLQQHGMTGRVRLH--RASWEKC--NGK--FDLIVSNPPYIKRCKISGL 200
Query: 490 KGDLR-FEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYG 548
+ ++R +EP+ AL G+ +I + + L +G ++E G +Q + +R +YG
Sbjct: 201 QPEVRLYEPMVALDGGVRGMEKYLQIFEILRRCLKPDGKAILEIGEDQ-HAIRTEALRYG 259
>UNIPROTKB|Q9KQ83 [details] [associations]
symbol:prmB "50S ribosomal protein L3 glutamine
methyltransferase" species:243277 "Vibrio cholerae O1 biovar El Tor
str. N16961" [GO:0006306 "DNA methylation" evidence=ISS]
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] [GO:0009007 "site-specific
DNA-methyltransferase (adenine-specific) activity" evidence=ISS]
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR007848
InterPro:IPR017127 Pfam:PF05175 PIRSF:PIRSF037167 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0005622 GO:GO:0008276
GO:GO:0009007 eggNOG:COG2890 TIGRFAMs:TIGR00536 KO:K07320
OMA:IYYGHGT ProtClustDB:PRK11805 HAMAP:MF_02125 TIGRFAMs:TIGR03533
PIR:H82115 RefSeq:NP_231749.1 ProteinModelPortal:Q9KQ83
DNASU:2613374 GeneID:2613374 KEGG:vch:VC2118 PATRIC:20083263
Uniprot:Q9KQ83
Length = 314
Score = 188 (71.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 57/221 (25%), Positives = 107/221 (48%)
Query: 324 DVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPR-PE 382
DV + + + + + ++ ++I+R P+AY+ K F GL + S VL+PR P
Sbjct: 62 DVPPHVLSSRLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPI 121
Query: 383 TELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXX 442
EL+ + E+ +++++ TGSG + + E+ A DIS
Sbjct: 122 GELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACAN-AFPEAEVDAIDISVDALNVAEQNI 180
Query: 443 XXXXXXYNI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501
+ PI+ S+ + +L ++ +++IV NPPY+ + D+ + R EP L
Sbjct: 181 QDHGLEQQVFPIR---SDLFRDLP--QEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGL 235
Query: 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRK 542
S+GL + I+ NA YL +NG+L+ E G + +++ +
Sbjct: 236 AAGSDGLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQ 276
>TIGR_CMR|VC_2118 [details] [associations]
symbol:VC_2118 "adenine-specific methylase, putative"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006306 "DNA
methylation" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0009007 "site-specific DNA-methyltransferase
(adenine-specific) activity" evidence=ISS] InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR007848 InterPro:IPR017127
Pfam:PF05175 PIRSF:PIRSF037167 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0005622 GO:GO:0008276
GO:GO:0009007 eggNOG:COG2890 TIGRFAMs:TIGR00536 KO:K07320
OMA:IYYGHGT ProtClustDB:PRK11805 HAMAP:MF_02125 TIGRFAMs:TIGR03533
PIR:H82115 RefSeq:NP_231749.1 ProteinModelPortal:Q9KQ83
DNASU:2613374 GeneID:2613374 KEGG:vch:VC2118 PATRIC:20083263
Uniprot:Q9KQ83
Length = 314
Score = 188 (71.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 57/221 (25%), Positives = 107/221 (48%)
Query: 324 DVELIINNEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPR-PE 382
DV + + + + + ++ ++I+R P+AY+ K F GL + S VL+PR P
Sbjct: 62 DVPPHVLSSRLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPI 121
Query: 383 TELLVDLIVKKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXX 442
EL+ + E+ +++++ TGSG + + E+ A DIS
Sbjct: 122 GELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACAN-AFPEAEVDAIDISVDALNVAEQNI 180
Query: 443 XXXXXXYNI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501
+ PI+ S+ + +L ++ +++IV NPPY+ + D+ + R EP L
Sbjct: 181 QDHGLEQQVFPIR---SDLFRDLP--QEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGL 235
Query: 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRK 542
S+GL + I+ NA YL +NG+L+ E G + +++ +
Sbjct: 236 AAGSDGLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQ 276
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 170 (64.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
D++ ++ ++ ADL R+SGAGGQH+NKT + V+I H PTGI V+C DRSQ N+
Sbjct: 18 DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFL 77
Query: 270 ALKILLARIK 279
A + +L RI+
Sbjct: 78 ARREILERIE 87
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 170 (64.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 210 DEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAF 269
D++ ++ ++ ADL R+SGAGGQH+NKT + V+I H PTGI V+C DRSQ N+
Sbjct: 18 DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFL 77
Query: 270 ALKILLARIK 279
A + +L RI+
Sbjct: 78 ARREILERIE 87
>UNIPROTKB|Q8ECQ4 [details] [associations]
symbol:prmB "50S ribosomal protein L3 glutamine
methyltransferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR007848 InterPro:IPR017127
Pfam:PF05175 PIRSF:PIRSF037167 GO:GO:0003676 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008276 GO:GO:0009007
TIGRFAMs:TIGR00536 HOGENOM:HOG000076275 KO:K07320
ProtClustDB:PRK11805 HAMAP:MF_02125 TIGRFAMs:TIGR03533
RefSeq:NP_718643.2 HSSP:Q9WYV8 ProteinModelPortal:Q8ECQ4
GeneID:1170766 KEGG:son:SO_3080 PATRIC:23525798 OMA:VCKENIE
Uniprot:Q8ECQ4
Length = 305
Score = 185 (70.2 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 58/221 (26%), Positives = 107/221 (48%)
Query: 326 ELIINNEKKLHKQEINILNKLIQRRILGE-PIAYIIGKKEFYGLVLNITSDVLIPR-PET 383
++I++N K +I +LI RR+ P+ Y+ K F GL + VL+PR P
Sbjct: 53 QVILSNLTSSEKHKIV---ELIIRRVRERLPVPYLTNKARFAGLEFYVDERVLVPRSPIA 109
Query: 384 ELLVDLIVKKTFEKKI-KLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXX 442
E++ + + K + ++L++ TGSG Y ++ E+ A DIS
Sbjct: 110 EMIANRFGPWLYGKPVNRILDLCTGSGCIAIACA-YEFDEAEVDALDISEDALDVAQVNV 168
Query: 443 XXXXXXYNI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501
+ P++ S+ ++ + + +++IV+NPPY+ + DI + EP L
Sbjct: 169 ETLGVMDRVFPMQ---SDLFSAIPEGPQ-YDLIVSNPPYVDEEDIGDMPDEYHHEPAIGL 224
Query: 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRK 542
+GL K I+ NA++YL G+L++E G + +L+ +
Sbjct: 225 ASGRDGLDLTKRILANAAQYLTPTGILVVEVGNSMVHLMEQ 265
>TIGR_CMR|SO_3080 [details] [associations]
symbol:SO_3080 "hemK family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR007848
InterPro:IPR017127 Pfam:PF05175 PIRSF:PIRSF037167 GO:GO:0003676
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008276
GO:GO:0009007 TIGRFAMs:TIGR00536 HOGENOM:HOG000076275 KO:K07320
ProtClustDB:PRK11805 HAMAP:MF_02125 TIGRFAMs:TIGR03533
RefSeq:NP_718643.2 HSSP:Q9WYV8 ProteinModelPortal:Q8ECQ4
GeneID:1170766 KEGG:son:SO_3080 PATRIC:23525798 OMA:VCKENIE
Uniprot:Q8ECQ4
Length = 305
Score = 185 (70.2 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 58/221 (26%), Positives = 107/221 (48%)
Query: 326 ELIINNEKKLHKQEINILNKLIQRRILGE-PIAYIIGKKEFYGLVLNITSDVLIPR-PET 383
++I++N K +I +LI RR+ P+ Y+ K F GL + VL+PR P
Sbjct: 53 QVILSNLTSSEKHKIV---ELIIRRVRERLPVPYLTNKARFAGLEFYVDERVLVPRSPIA 109
Query: 384 ELLVDLIVKKTFEKKI-KLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXX 442
E++ + + K + ++L++ TGSG Y ++ E+ A DIS
Sbjct: 110 EMIANRFGPWLYGKPVNRILDLCTGSGCIAIACA-YEFDEAEVDALDISEDALDVAQVNV 168
Query: 443 XXXXXXYNI-PIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINAL 501
+ P++ S+ ++ + + +++IV+NPPY+ + DI + EP L
Sbjct: 169 ETLGVMDRVFPMQ---SDLFSAIPEGPQ-YDLIVSNPPYVDEEDIGDMPDEYHHEPAIGL 224
Query: 502 TDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRK 542
+GL K I+ NA++YL G+L++E G + +L+ +
Sbjct: 225 ASGRDGLDLTKRILANAAQYLTPTGILVVEVGNSMVHLMEQ 265
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 223 RIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKIL 274
R++T+R SG GGQH NK DSAVR+ H+PTGIV Q DRSQHKN+A AL L
Sbjct: 99 RLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRL 150
>UNIPROTKB|P39199 [details] [associations]
symbol:prmB "protein-glutamine N-methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0032775 "DNA methylation
on adenine" evidence=IEA] [GO:0009007 "site-specific
DNA-methyltransferase (adenine-specific) activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IDA] [GO:0036009
"protein-glutamine N-methyltransferase activity" evidence=IDA]
[GO:0006479 "protein methylation" evidence=IDA] [GO:0018364
"peptidyl-glutamine methylation" evidence=IMP] [GO:0008276 "protein
methyltransferase activity" evidence=IDA] InterPro:IPR002052
InterPro:IPR004556 InterPro:IPR007848 InterPro:IPR017127
Pfam:PF05175 PIRSF:PIRSF037167 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003676
GO:GO:0005622 EMBL:M27714 EMBL:Y00720 EMBL:M33021 GO:GO:0009007
eggNOG:COG2890 TIGRFAMs:TIGR00536 GO:GO:0018364 PIR:H65005
RefSeq:NP_416833.4 RefSeq:YP_490572.1 ProteinModelPortal:P39199
SMR:P39199 DIP:DIP-11976N IntAct:P39199 MINT:MINT-1267343
PRIDE:P39199 EnsemblBacteria:EBESCT00000001502
EnsemblBacteria:EBESCT00000015178 GeneID:12932066 GeneID:946805
KEGG:ecj:Y75_p2296 KEGG:eco:b2330 PATRIC:32120033 EchoBASE:EB2343
EcoGene:EG12449 HOGENOM:HOG000076275 KO:K07320 OMA:IYYGHGT
ProtClustDB:PRK11805 BioCyc:EcoCyc:EG12449-MONOMER
BioCyc:ECOL316407:JW5841-MONOMER BioCyc:MetaCyc:EG12449-MONOMER
Genevestigator:P39199 GO:GO:0036009 HAMAP:MF_02125
TIGRFAMs:TIGR03533 Uniprot:P39199
Length = 310
Score = 180 (68.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/203 (28%), Positives = 97/203 (47%)
Query: 342 ILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPR-PETELLVDLIVKKTFEKKIK 400
I+ ++I+R P+AY+ K F G + VL+PR P EL+ + ++
Sbjct: 76 IVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNKFAGLISKQPQH 135
Query: 401 LLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYN-IPIKFIKSN 459
+L+M TGSG Y+ E+ A DIS +N IPI+ S+
Sbjct: 136 ILDMCTGSGCIAIACA-YAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIR---SD 191
Query: 460 WYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNAS 519
+ +L K +++IV NPPY+ D+ + R EP L ++GL + I+ NA+
Sbjct: 192 LFRDLP--KVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAA 249
Query: 520 KYLVKNGLLLIEHGYNQSNLVRK 542
YL +G+L+ E G + +L+ +
Sbjct: 250 DYLADDGVLICEVGNSMVHLMEQ 272
>UNIPROTKB|B0B9D1 [details] [associations]
symbol:prmC "Release factor glutamine methyltransferase"
species:471472 "Chlamydia trachomatis 434/Bu" [GO:0006479 "protein
methylation" evidence=IDA] [GO:0008276 "protein methyltransferase
activity" evidence=IDA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IDA] [GO:0018364
"peptidyl-glutamine methylation" evidence=IGI] [GO:0036009
"protein-glutamine N-methyltransferase activity" evidence=IGI]
HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR007848 InterPro:IPR019874 Pfam:PF05175 GO:GO:0003676
EMBL:AM884176 GenomeReviews:AM884176_GR eggNOG:COG2890
HOGENOM:HOG000076274 TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534
GO:GO:0018364 GO:GO:0036009 KO:K02493 ProtClustDB:PRK09328
EMBL:AY600244 RefSeq:YP_001654363.1 ProteinModelPortal:B0B9D1
STRING:B0B9D1 GeneID:5858726 KEGG:ctb:CTL0279 PATRIC:20376054
OMA:HITGRAY BioCyc:CTRA471472:GJ9M-294-MONOMER Uniprot:B0B9D1
Length = 290
Score = 169 (64.5 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 57/236 (24%), Positives = 108/236 (45%)
Query: 331 NEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLI 390
++ KL +E ++ K +++R P AYI GK F G+ L +T VLIPR ETE+ V+ I
Sbjct: 41 HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLGVELQVTPQVLIPRQETEIFVEQI 100
Query: 391 VK--KTFEKKIKLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXX 448
+ + ++K ++ GSG + + + + +DIS
Sbjct: 101 IGYLQMHKEKTTFYDVCCGSGCIGLAVRKHCPH-VRVTLSDISPEALAIAESNARSNA-- 157
Query: 449 YNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLR-FEPINALTDYSNG 507
+ + F+ + ++ ++ +++V NPPY+ + + ++R EP AL +G
Sbjct: 158 --LAVDFLLGDLFDPF-SFPA--DVLVCNPPYLSYKEFFESDPEVRCHEPWKALVGGVSG 212
Query: 508 LSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLLFKYGFSDIKSWRDLSGIER 563
L I + K LV G+ +E G Q V+++ G + +D + ++R
Sbjct: 213 LEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKQIFHAKGIRG-RVLKDYAQLDR 267
>FB|FBgn0031817 [details] [associations]
symbol:CG9531 species:7227 "Drosophila melanogaster"
[GO:0004729 "oxygen-dependent protoporphyrinogen oxidase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008276 "protein methyltransferase activity" evidence=IEA]
[GO:0006479 "protein methylation" evidence=IEA] InterPro:IPR002052
InterPro:IPR004556 PROSITE:PS00092 GO:GO:0003676 GO:GO:0008276
TIGRFAMs:TIGR00536 HSSP:Q9WYV8 EMBL:AY061594
ProteinModelPortal:Q95R65 STRING:Q95R65 FlyBase:FBgn0031817
InParanoid:Q95R65 OrthoDB:EOG4WWQ17 Bgee:Q95R65 Uniprot:Q95R65
Length = 328
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/223 (23%), Positives = 103/223 (46%)
Query: 331 NEKKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLI 390
++ +L+ ++ + ++ R P+ +IIG+ +F + L + V IPRPETE + L+
Sbjct: 83 DQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTSPSVFIPRPETEEFMRLV 142
Query: 391 VKKTFEKK-IKLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXY 449
+ K + LLE+G GSG +S ++ A + S
Sbjct: 143 IDDHKNAKHVDLLEVGCGSGAMSLSML-HSLPQVVATAIERSKAATVLAAENAKMLGLLN 201
Query: 450 NIPIK---FIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIH-LNKGDLRFEPINALTDYS 505
+ + + ++ KK +++I++NPPY+ + L+ + +E +NAL S
Sbjct: 202 RFEVHNHTMEEDKYLPDVLKDKK-YDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 260
Query: 506 NGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL-FKY 547
+GL + + A ++L G L +E G + +V+ ++ KY
Sbjct: 261 DGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKY 303
>UNIPROTKB|Q10602 [details] [associations]
symbol:prmC "Release factor glutamine methyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_02126 InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842576
GO:GO:0003676 GO:GO:0008276 eggNOG:COG2890 TIGRFAMs:TIGR00536
KO:K02493 ProtClustDB:PRK09328 PIR:H70773 RefSeq:NP_215816.1
RefSeq:NP_335787.1 RefSeq:YP_006514677.1 ProteinModelPortal:Q10602
SMR:Q10602 DNASU:886950 EnsemblBacteria:EBMYCT00000001384
EnsemblBacteria:EBMYCT00000071568 GeneID:13319882 GeneID:886950
GeneID:924727 KEGG:mtc:MT1339 KEGG:mtu:Rv1300 KEGG:mtv:RVBD_1300
PATRIC:18124712 TubercuList:Rv1300 HOGENOM:HOG000076276 OMA:GIASARW
Uniprot:Q10602
Length = 304
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 346 LIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKIKLLEMG 405
++ R P+ ++IG F +VL++ V +PRPETE ++ ++ + +++
Sbjct: 58 IVTARARRVPLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLPARPLIVDAC 117
Query: 406 TGSGXXXXXXXXYSKN---KIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYN 462
TGSG + N K II D S P++ ++++
Sbjct: 118 TGSGALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGT------PVELVRADVTT 171
Query: 463 N--LQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASK 520
L +++V+NPPYIP + L + +P +AL +G++ I +V A +
Sbjct: 172 PRLLPELDGQVDLMVSNPPYIPDAAV-LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGR 230
Query: 521 YLVKNGLLLIEHGYNQSNLVRKLLFKYG-FSDIKSWRDLSGIER 563
+L GL +EH S+ L+ F D+++ +DL+G R
Sbjct: 231 WLRPGGLFAVEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPR 274
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 146 (56.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNT 290
G GGQ INKT+S V++THIPTG+VV CQ RSQ +N+A A + L ++ D N
Sbjct: 50 GPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDFYNPGTSRNA 109
Query: 291 AKMRR 295
M R
Sbjct: 110 VLMER 114
>MGI|MGI:1916786 [details] [associations]
symbol:Hemk1 "HemK methyltransferase family member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006479 "protein
methylation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0008276 "protein methyltransferase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 PROSITE:PS00092 MGI:MGI:1916786 GO:GO:0005739
GO:GO:0003676 GO:GO:0008276 KO:K00599 CTD:51409 eggNOG:COG2890
HOGENOM:HOG000076274 HOVERGEN:HBG081597 OMA:FSSWQPH
OrthoDB:EOG480HX3 TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534
EMBL:AL672070 EMBL:BC011431 EMBL:BC024428 IPI:IPI00121978
IPI:IPI00944140 RefSeq:NP_598745.2 UniGene:Mm.259467
ProteinModelPortal:Q921L7 STRING:Q921L7 PRIDE:Q921L7
Ensembl:ENSMUST00000035196 GeneID:69536 KEGG:mmu:69536
GeneTree:ENSGT00390000014125 InParanoid:Q921L7 NextBio:329700
CleanEx:MM_HEMK1 Genevestigator:Q921L7
GermOnline:ENSMUSG00000032579 Uniprot:Q921L7
Length = 340
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 333 KKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVK 392
K L Q++ + +L RR+ P+ YI+G+ +F GL L + V IPRPETE LV+ +++
Sbjct: 88 KPLTPQQLECIQELCGRRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLE 147
Query: 393 KTFEKK--IK------LLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXX 444
+ ++ ++ +LE+G GSG K ++A D
Sbjct: 148 EVAQRPHAVRAQDGPLILEVGCGSGAITLSLLSQLP-KSRVVAVDKEEAAVSLTHENAQR 206
Query: 445 XXXXYNIPIKFI---KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDL-RFEPINA 500
I I + +L + L +++V+NPPYI + D+ ++ +E + A
Sbjct: 207 LQLQDRIRIIHLDITSEGCCTHLLPWSPL-DLVVSNPPYIFRKDMEQLAPEICSYEDLVA 265
Query: 501 LTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL 544
L G+ I I+ A + L +G + +E LV L
Sbjct: 266 LDGGDEGMDIITHILTLAPQLLNASGSIFLEVDPRHPELVSSWL 309
>RGD|1308293 [details] [associations]
symbol:Hemk1 "HemK methyltransferase family member 1"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0008276 "protein methyltransferase activity"
evidence=IEA] InterPro:IPR002052 InterPro:IPR004556
InterPro:IPR019874 PROSITE:PS00092 RGD:1308293 GO:GO:0005739
GO:GO:0003676 EMBL:CH473954 GO:GO:0008276 KO:K00599 CTD:51409
eggNOG:COG2890 HOGENOM:HOG000076274 HOVERGEN:HBG081597 OMA:FSSWQPH
OrthoDB:EOG480HX3 TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534
GeneTree:ENSGT00390000014125 EMBL:BC161944 IPI:IPI00373553
RefSeq:NP_001100323.1 UniGene:Rn.37790 STRING:B1WBZ2
Ensembl:ENSRNOT00000020781 GeneID:300989 KEGG:rno:300989
UCSC:RGD:1308293 NextBio:647850 Genevestigator:B1WBZ2
Uniprot:B1WBZ2
Length = 340
Score = 163 (62.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 333 KKLHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVK 392
K L Q++ + +L R+ P+ YI+G+ +F GL L + V IPRPETE LV+ +++
Sbjct: 88 KPLTPQQLECIQELCNHRLQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLE 147
Query: 393 KTFEKK--IK------LLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXX 444
+ ++ ++ +LE+G GSG K ++IA D
Sbjct: 148 EVAQRPPAVRAQDGPLILEVGCGSGAIALSLLSQLP-KTQVIAVDKEEAAVSLTLENAQR 206
Query: 445 XXXXYNIPIKFI---KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLR-FEPINA 500
I I + +L + + +++V+NPPYI + D+ ++R +E + A
Sbjct: 207 LQLQDRIRIIHLDITSEGCCTHLLPWGPM-DLVVSNPPYIFRKDMEQLAPEIRSYEDLVA 265
Query: 501 LTDYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL 544
L G+ I I+ A L +G + +E LV L
Sbjct: 266 LDGGDEGMDIITHILTLAPWLLNASGSIFLEVDPRHPELVSSWL 309
>ZFIN|ZDB-GENE-050208-185 [details] [associations]
symbol:hemk1 "HemK methyltransferase family member
1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008276 "protein methyltransferase activity"
evidence=IEA] [GO:0006479 "protein methylation" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002052
InterPro:IPR004556 PROSITE:PS00092 ZFIN:ZDB-GENE-050208-185
GO:GO:0003676 GO:GO:0008276 OMA:FSSWQPH TIGRFAMs:TIGR00536
GeneTree:ENSGT00390000014125 EMBL:CR847825 IPI:IPI00884776
Ensembl:ENSDART00000113157 Bgee:F1QJH5 Uniprot:F1QJH5
Length = 342
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 62/225 (27%), Positives = 102/225 (45%)
Query: 345 KLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVK--KTFEKKIKLL 402
KL +R+ P+ Y+I + +F L L + V IPRPETE LV L+++ ++ L
Sbjct: 108 KLCSKRLTRMPVQYVIEEWDFRDLTLKMKPPVFIPRPETEELVGLVLEDFESIRGDFHGL 167
Query: 403 EMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYN 462
E+G GSG S ++ + A D S + + +
Sbjct: 168 EVGCGSGAISLSLLR-SLPQLRVFALDQSQDAVCLTMENANRLGLQDRLEVHHLDVVKDA 226
Query: 463 NLQNYK-KLFNIIVANPPYIPKGDIHLNKGDL-RFEPINALTDYSNGLSSIKEIVKNASK 520
++ K + IV+NPPYI D+ + ++ FE AL S+GL I+ I+ ASK
Sbjct: 227 DVILSKCNPVDFIVSNPPYILSQDMEALQTEIFGFEDHAALDGGSDGLFVIRPILALASK 286
Query: 521 YLVKNGLLLIEHGYNQSNLVRKLLFKY--GFSDIKSWRDLSGIER 563
L K G + +E ++++L+ + F ++S DLS R
Sbjct: 287 LLTKQGRVYLEVSSCHPPVIQQLVMETMPEFIYLESRCDLSNRPR 331
>POMBASE|SPBC1105.18c [details] [associations]
symbol:SPBC1105.18c "peptide release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006415 "translational
termination" evidence=IC] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
PomBase:SPBC1105.18c GO:GO:0005739 EMBL:CU329671 Gene3D:3.30.160.20
GO:GO:0032543 eggNOG:COG1186 GO:GO:0004045 GO:GO:0003747
GO:GO:0006415 OrthoDB:EOG4WHCWF RefSeq:NP_596474.2
ProteinModelPortal:Q9Y811 STRING:Q9Y811 EnsemblFungi:SPBC1105.18c.1
GeneID:2539814 KEGG:spo:SPBC1105.18c NextBio:20800963
Uniprot:Q9Y811
Length = 162
Score = 142 (55.0 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 197 HTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQ 256
HT C+ P ++E + D+ G GGQ INKT ++ HIPTGI+V+
Sbjct: 31 HTWYCSKKETPY--QLE--RLQEEDIEETFICGKGPGGQKINKTSIVAQVKHIPTGIIVR 86
Query: 257 CQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQKKSPLNIFETNILL 316
Q+ RS+ +N+ A K L ++ + K K++R+ V+KK E
Sbjct: 87 SQDTRSREQNRCIARKRLTEKVDEFKHGNDSLLARKVQRI----VKKKKQR---EKKSKR 139
Query: 317 KYVTRLSDVELIINNEKKLHKQEI 340
KY ++ D + +NN + KQ++
Sbjct: 140 KYGNKIDDQDSSLNNNEA--KQDV 161
>UNIPROTKB|Q9Y5R4 [details] [associations]
symbol:HEMK1 "HemK methyltransferase family member 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008170
"N-methyltransferase activity" evidence=IEA] [GO:0008276 "protein
methyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002052 InterPro:IPR002295
InterPro:IPR004556 InterPro:IPR019874 PRINTS:PR00506
PROSITE:PS00092 GO:GO:0005739 GO:GO:0003677 GO:GO:0006306
GO:GO:0008276 KO:K00599 GO:GO:0008170 EMBL:AF131220 EMBL:AF172244
EMBL:BC000781 IPI:IPI00007739 RefSeq:NP_057257.1 UniGene:Hs.517987
UniGene:Hs.599362 ProteinModelPortal:Q9Y5R4 SMR:Q9Y5R4
STRING:Q9Y5R4 DMDM:18203634 PRIDE:Q9Y5R4 DNASU:51409
Ensembl:ENST00000232854 Ensembl:ENST00000434410
Ensembl:ENST00000455834 GeneID:51409 KEGG:hsa:51409 UCSC:uc003dau.3
CTD:51409 GeneCards:GC03P050606 HGNC:HGNC:24923 HPA:HPA034701
HPA:HPA034702 neXtProt:NX_Q9Y5R4 PharmGKB:PA134884011
eggNOG:COG2890 HOGENOM:HOG000076274 HOVERGEN:HBG081597
InParanoid:Q9Y5R4 OMA:FSSWQPH OrthoDB:EOG480HX3 PhylomeDB:Q9Y5R4
GenomeRNAi:51409 NextBio:54953 ArrayExpress:Q9Y5R4 Bgee:Q9Y5R4
CleanEx:HS_HEMK1 Genevestigator:Q9Y5R4 GermOnline:ENSG00000114735
TIGRFAMs:TIGR00536 TIGRFAMs:TIGR03534 Uniprot:Q9Y5R4
Length = 338
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/222 (24%), Positives = 96/222 (43%)
Query: 335 LHKQEINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKT 394
L Q++ + +L RR+ P+ YI+G+ +F GL L + V IPRPETE LV+ ++++
Sbjct: 89 LTSQQLQCIRELSSRRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEV 148
Query: 395 FEKKIK--------LLEMGTGSGXXXXXXXXYSKNKIEIIATD---ISXXXXXXXXXXXX 443
++ +LE+G GSG +IA D +
Sbjct: 149 AQRSHAVGSPGSPLILEVGCGSGAISLSLLSQLPQS-RVIAVDKREAAISLTHENAQRLR 207
Query: 444 XXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLR-FEPINALT 502
+ I + + +L + + ++IV+NPPY+ D+ ++R +E AL
Sbjct: 208 LQDRIWIIHLDMTSERSWTHLP-WGPM-DLIVSNPPYVFHQDMEQLAPEIRSYEDPAALD 265
Query: 503 DYSNGLSSIKEIVKNASKYLVKNGLLLIEHGYNQSNLVRKLL 544
G+ I I+ A + L +G + +E LV L
Sbjct: 266 GGEEGMDIITHILALAPRLLKDSGSIFLEVDPRHPELVSSWL 307
>UNIPROTKB|E1BTM2 [details] [associations]
symbol:HEMK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008276 "protein methyltransferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR002052
InterPro:IPR004556 PROSITE:PS00092 GO:GO:0005739 GO:GO:0003676
GO:GO:0008276 OMA:FSSWQPH TIGRFAMs:TIGR00536
GeneTree:ENSGT00390000014125 EMBL:AADN02056541 IPI:IPI00587872
ProteinModelPortal:E1BTM2 Ensembl:ENSGALT00000003536
ArrayExpress:E1BTM2 Uniprot:E1BTM2
Length = 348
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 54/208 (25%), Positives = 96/208 (46%)
Query: 335 LHKQEINILN-KLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIV-- 391
+ +++I L+ K ++R + P+ Y++G+ +F L L + V IPRPETE L+ L+V
Sbjct: 101 VQQEQIQQLSCKRLERHRM--PVQYVLGEWDFQNLTLKMRPPVFIPRPETEDLISLVVEE 158
Query: 392 --KKTFEKKIK---LLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXX 446
+K+F + +LE+G GSG ++A D
Sbjct: 159 ESRKSFSVAVPPPVILEIGCGSGAIALSLLCKIPQS-RVLAVDKEEAAVDLTRENVHRLQ 217
Query: 447 XXYNIPIKFIKSNWYNNLQNYKKL--FNIIVANPPYIPKGDI-HLNKGDLRFEPINALTD 503
I + + Y + ++ + IV+NPPY+ D+ L+ LR+E ++AL
Sbjct: 218 LQGRIHVLHHNVS-YGSAKHLLPWGPMDFIVSNPPYVFHEDMASLDAEILRYEDLDALDG 276
Query: 504 YSNGLSSIKEIVKNASKYLVKNGLLLIE 531
+G+ IK I+ A L +G + +E
Sbjct: 277 GDDGMRVIKTILTLAPTLLKDSGSVFLE 304
>UNIPROTKB|F1NSN8 [details] [associations]
symbol:F1NSN8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:AADN02034888 EMBL:AADN02034889
EMBL:AADN02034890 EMBL:AADN02034891 EMBL:AADN02034892
IPI:IPI00587441 Ensembl:ENSGALT00000005399 Uniprot:F1NSN8
Length = 141
Score = 132 (51.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKIL 274
+ + A+L+ R G GGQ NKT + V + H+P+GIVV+C RS KN+ A +IL
Sbjct: 30 VELTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREIL 89
Query: 275 LARIKDSKLREQQSNTAK 292
++ D + + S+ K
Sbjct: 90 QEKV-DLFYKGEDSDVFK 106
>FB|FBgn0050100 [details] [associations]
symbol:CG30100 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720 EMBL:AE013599
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:BT030757 RefSeq:NP_725560.1
UniGene:Dm.38081 SMR:A1ZAD7 STRING:A1ZAD7
EnsemblMetazoa:FBtr0087140 GeneID:246457 KEGG:dme:Dmel_CG30100
UCSC:CG30100-RA FlyBase:FBgn0050100 eggNOG:NOG295143
InParanoid:A1ZAD7 OMA:CHTHRLA OrthoDB:EOG4JH9Z9 NextBio:842552
Uniprot:A1ZAD7
Length = 146
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 217 INPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLA 276
+ +D+ R SG GGQ +NKT + V + H+PT I V+C R KN+ A K+LL
Sbjct: 30 LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89
Query: 277 RIKDSKLREQQSNTAKMR 294
++ D L + S A+++
Sbjct: 90 KL-DVHLNGEHSIAAQVK 106
>TIGR_CMR|CPS_3151 [details] [associations]
symbol:CPS_3151 "protein-(glutamine-N5) methyltransferase,
ribosomal protein L3-specific" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008276 "protein methyltransferase
activity" evidence=ISS] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=ISS] [GO:0018364
"peptidyl-glutamine methylation" evidence=ISS] [GO:0042273
"ribosomal large subunit biogenesis" evidence=ISS]
InterPro:IPR002052 InterPro:IPR004556 InterPro:IPR007848
InterPro:IPR017127 Pfam:PF05175 PIRSF:PIRSF037167 PROSITE:PS00092
GO:GO:0003676 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0009007 eggNOG:COG2890 TIGRFAMs:TIGR00536 GO:GO:0018364
HOGENOM:HOG000076275 KO:K07320 OMA:IYYGHGT ProtClustDB:PRK11805
GO:GO:0036009 HAMAP:MF_02125 TIGRFAMs:TIGR03533 RefSeq:YP_269848.1
ProteinModelPortal:Q47ZC2 STRING:Q47ZC2 GeneID:3520746
KEGG:cps:CPS_3151 PATRIC:21469289
BioCyc:CPSY167879:GI48-3200-MONOMER Uniprot:Q47ZC2
Length = 314
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 341 NILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKKI- 399
NIL QR +P+AYI F L + VL+PR L++ F ++
Sbjct: 75 NILALFEQRIETQQPVAYITNLAYFAQLPFYVDERVLVPRSPIGELIEKHFDPYFSEQNP 134
Query: 400 --KLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYN-IPIKFI 456
++L++ TGSG Y + E+ A D+S IPI+
Sbjct: 135 PQRILDLCTGSGCIAIACASYFPDA-EVDAVDLSLDALNVAEINIENHGLSEQVIPIQ-- 191
Query: 457 KSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLRFEPINALTDYSNGLSSIKEIVK 516
S+ ++ + K +++IV NPPY+ + DI + EP L +GL ++ I+
Sbjct: 192 -SDVFSGVTAQK--YDLIVTNPPYVDQEDIDSLPAEFTHEPEMGLGCGEDGLDIVRIILA 248
Query: 517 NASKYLVKNGLLLIEHGYNQ 536
++ YL +G+L+ E G +Q
Sbjct: 249 ESALYLNDDGVLICEVGNSQ 268
>UNIPROTKB|Q9H3J6 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=NAS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
EMBL:CH471054 eggNOG:COG1186 GO:GO:0003747 EMBL:AF061733
EMBL:AK095982 EMBL:BC018145 EMBL:BC020885 EMBL:BC062329
IPI:IPI00019211 IPI:IPI00382906 RefSeq:NP_001137377.1
RefSeq:NP_001181924.1 RefSeq:NP_689482.1 UniGene:Hs.319128
ProteinModelPortal:Q9H3J6 SMR:Q9H3J6 IntAct:Q9H3J6 STRING:Q9H3J6
PhosphoSite:Q9H3J6 DMDM:74733574 PRIDE:Q9H3J6 DNASU:91574
Ensembl:ENST00000253233 Ensembl:ENST00000366329
Ensembl:ENST00000429587 GeneID:91574 KEGG:hsa:91574 UCSC:uc001uen.3
CTD:91574 GeneCards:GC12P123717 HGNC:HGNC:26784 HPA:HPA038194
MIM:613541 MIM:613559 neXtProt:NX_Q9H3J6 Orphanet:254930
Orphanet:70474 PharmGKB:PA162377963 HOGENOM:HOG000217812
HOVERGEN:HBG094928 InParanoid:Q9H3J6 OMA:WESSKNV OrthoDB:EOG4T784Q
PhylomeDB:Q9H3J6 GenomeRNAi:91574 NextBio:77303 ArrayExpress:Q9H3J6
Bgee:Q9H3J6 CleanEx:HS_C12orf65 Genevestigator:Q9H3J6
Uniprot:Q9H3J6
Length = 166
Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 35/105 (33%), Positives = 51/105 (48%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKIL 274
++++ +L + G GGQ NKT + V + HIP+GIVV+C RS +N+ A KIL
Sbjct: 53 LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKIL 112
Query: 275 LARIKDSKLREQQSNTAKMRRLLIGSVQ--KKSPLNIFETNILLK 317
++ D + S K +R Q KK E LLK
Sbjct: 113 QEKV-DVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLK 156
>MGI|MGI:1919900 [details] [associations]
symbol:2810006K23Rik "RIKEN cDNA 2810006K23 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 MGI:MGI:1919900
GO:GO:0005739 Gene3D:3.30.160.20 eggNOG:COG1186 GO:GO:0003747
HOGENOM:HOG000217812 HOVERGEN:HBG094928 OrthoDB:EOG4T784Q
EMBL:AK012682 EMBL:AK039255 EMBL:AK140664 EMBL:BC046909
IPI:IPI00465979 IPI:IPI00856726 RefSeq:NP_001128189.1
RefSeq:NP_082586.1 UniGene:Mm.121658 PDB:2RSM PDBsum:2RSM
ProteinModelPortal:Q80VP5 SMR:Q80VP5 STRING:Q80VP5 PaxDb:Q80VP5
PRIDE:Q80VP5 Ensembl:ENSMUST00000077376 Ensembl:ENSMUST00000111477
GeneID:72650 KEGG:mmu:72650 UCSC:uc008zpm.1 UCSC:uc008zpn.1
GeneTree:ENSGT00390000012759 InParanoid:Q80VP5 OMA:ELMSSEA
NextBio:336653 Bgee:Q80VP5 CleanEx:MM_2810006K23RIK
Genevestigator:Q80VP5 Uniprot:Q80VP5
Length = 184
Score = 131 (51.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 199 SACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 258
+A TV V D + +N ++L + G GGQ NKT + V + H+P+GIVV+C
Sbjct: 40 AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99
Query: 259 NDRSQHKNKAFALKILLARI 278
RS +N+ A K+L ++
Sbjct: 100 QTRSVDQNRKIARKVLQEKV 119
>SGD|S000004271 [details] [associations]
symbol:YLR281C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0006415 "translational
termination" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 SGD:S000004271
GO:GO:0005739 Gene3D:3.30.160.20 EMBL:BK006945 EMBL:U17243
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812
GeneTree:ENSGT00390000012759 EMBL:AY557931 PIR:S50367
RefSeq:NP_013383.1 ProteinModelPortal:Q05863 SMR:Q05863
DIP:DIP-2590N STRING:Q05863 EnsemblFungi:YLR281C GeneID:850987
KEGG:sce:YLR281C CYGD:YLR281c OMA:KHERARA OrthoDB:EOG4WHCWF
NextBio:967507 Genevestigator:Q05863 GermOnline:YLR281C
Uniprot:Q05863
Length = 155
Score = 123 (48.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 231 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLAR 277
G GGQ INK +S V++ H PTGIVV+CQ RS+ +N+ A ++ LAR
Sbjct: 47 GPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLA-RLKLAR 92
>UNIPROTKB|E2RK46 [details] [associations]
symbol:HEMK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008276 "protein methyltransferase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002052
InterPro:IPR004556 PROSITE:PS00092 GO:GO:0005739 GO:GO:0003676
GO:GO:0008276 KO:K00599 CTD:51409 OMA:FSSWQPH TIGRFAMs:TIGR00536
GeneTree:ENSGT00390000014125 EMBL:AAEX03012216 RefSeq:XP_533816.2
Ensembl:ENSCAFT00000016351 GeneID:476613 KEGG:cfa:476613
Uniprot:E2RK46
Length = 358
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 339 EINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFEKK 398
++ + +L RR+ P+ YI+G+ +F GL L + V IPRPETE LV+ ++++ +
Sbjct: 93 QLQCIQELSSRRLQRMPVQYILGEWDFQGLSLKMAPPVFIPRPETEELVEWVLEEVAQSP 152
Query: 399 IKL--------LEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXXXXXYN 450
+ LE+G GSG +IA D
Sbjct: 153 CAMGTQDGPLILEVGCGSGAISLSLLSQLPQS-RVIAVDKGEAAICLTEENAQRLRLLDR 211
Query: 451 I---PIKF-IKSNWYNNLQNYKKLFNIIVANPPYIPKGDIHLNKGDLR-FEPINALTDYS 505
I P+ ++ +W + L + + +++V+NPPYI D+ ++R +E AL
Sbjct: 212 IRIVPLDVTLEGSWAHLLP-WGPV-DLVVSNPPYIFHQDMEQLAPEIRSYEDPLALDGGE 269
Query: 506 NGLSSIKEIVKNASKYLVKNGLLLIE 531
G+ I I+ A L +G + +E
Sbjct: 270 EGMDIIIHILALARWLLKDSGSIFLE 295
>UNIPROTKB|F5H4X5 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 HGNC:HGNC:26784
EMBL:AC073857 EMBL:AC068768 IPI:IPI01014644 Ensembl:ENST00000543139
ArrayExpress:F5H4X5 Bgee:F5H4X5 Uniprot:F5H4X5
Length = 138
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKIL 274
++++ +L + G GGQ NKT + V + HIP+GIVV+C RS +N+ A KIL
Sbjct: 53 LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKIL 112
Query: 275 LARIKDSKLREQQSNTAKMRR 295
++ D + S K +R
Sbjct: 113 QEKV-DVFYNGENSPVHKEKR 132
>UNIPROTKB|F1M2Z8 [details] [associations]
symbol:RGD1563482 "Protein RGD1563482" species:10116
"Rattus norvegicus" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 RGD:1563482 IPI:IPI00370893
Ensembl:ENSRNOT00000001421 ArrayExpress:F1M2Z8 Uniprot:F1M2Z8
Length = 183
Score = 125 (49.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 199 SACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQ 258
+A + V + D + +N ++L + G GGQ NKT + V + H+P+GIVV+C
Sbjct: 39 AATAMQVAGKKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 98
Query: 259 NDRSQHKNKAFALKILLARI 278
RS +N+ A KIL ++
Sbjct: 99 QTRSVDQNRKMARKILQEKV 118
>UNIPROTKB|F1MC55 [details] [associations]
symbol:HEMK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008276
"protein methyltransferase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002052
InterPro:IPR004556 PROSITE:PS00092 GO:GO:0005739 GO:GO:0003676
GO:GO:0008276 OMA:FSSWQPH TIGRFAMs:TIGR00536
GeneTree:ENSGT00390000014125 EMBL:DAAA02054407 IPI:IPI00711052
UniGene:Bt.51775 ProteinModelPortal:F1MC55
Ensembl:ENSBTAT00000005382 Uniprot:F1MC55
Length = 321
Score = 108 (43.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 339 EINILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKKTFE-K 397
++ + +L R+ P+ YI+G+ +F GL L + V IPRPETE LV+ ++++ +
Sbjct: 86 QLQCIQELSSYRLQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGP 145
Query: 398 KIK-------LLEMGTGSG 409
++ +LE+G GSG
Sbjct: 146 RVVGAEGGPLILEVGCGSG 164
Score = 70 (29.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 472 NIIVANPPYIPKGDI-HLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGLLLI 530
+++V+NPPY+ D+ +L LR+E AL G+ I I+ A + L +G + +
Sbjct: 228 DLVVSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQLLKDSGSIFL 287
Query: 531 E 531
E
Sbjct: 288 E 288
>UNIPROTKB|F1RFL3 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:CU462966
Ensembl:ENSSSCT00000010716 Uniprot:F1RFL3
Length = 187
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 183 RVQRVPKTETQGRIHTSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDS 242
R+ + P T G T+ V + D ++++ +L + G GGQ NKT +
Sbjct: 27 RLCQKPALLTPG---TAGAPVQAAGKKDRPALLSLDERELEEQFVKGHGPGGQATNKTSN 83
Query: 243 AVRITHIPTGIVVQCQNDRSQHKNKAFALKILLARIKDSKLREQQSNTAKMRRLLIGSVQ 302
V + HIP+GIVV+C RS +N+ A +IL ++ D + S K +R Q
Sbjct: 84 CVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQEKV-DVFYNGENSPVYKEKREAEKRKQ 142
Query: 303 --KKSPLNIFETNILLK 317
KK E LLK
Sbjct: 143 ERKKRAKETLEKKKLLK 159
>UNIPROTKB|F1MLX1 [details] [associations]
symbol:C17H12orf65 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:DAAA02045238 IPI:IPI00704175
Ensembl:ENSBTAT00000027321 Uniprot:F1MLX1
Length = 173
Score = 120 (47.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 198 TSACTVAVIPEADEIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQC 257
T A V + D ++++ +L + G GGQ NKT + V + H+P+GIVV+C
Sbjct: 37 TVATPVQAAGKKDRPTLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKC 96
Query: 258 QNDRSQHKNKAFALKILLARI 278
RS +N+ A +IL ++
Sbjct: 97 HQTRSVDQNRKLARRILQEKV 117
>UNIPROTKB|E1C5S6 [details] [associations]
symbol:HEMK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008276 "protein methyltransferase activity" evidence=IEA]
InterPro:IPR002052 InterPro:IPR004556 PROSITE:PS00092 GO:GO:0003676
GO:GO:0008276 TIGRFAMs:TIGR00536 GeneTree:ENSGT00390000014125
EMBL:AADN02056541 IPI:IPI00822266 Ensembl:ENSGALT00000036290
ArrayExpress:E1C5S6 Uniprot:E1C5S6
Length = 306
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/209 (23%), Positives = 95/209 (45%)
Query: 335 LHKQEINILN-KLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKK 393
+ +++I L+ K ++R + P+ Y++G+ +F L L + V IPRPETE +++++ ++
Sbjct: 101 VQQEQIQQLSCKRLERHRM--PVQYVLGEWDFQNLTLKMRPPVFIPRPETEKIIEVVGEE 158
Query: 394 -TFEKKI-------KLLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXX 445
T + +LE+G GSG ++A D
Sbjct: 159 VTCGHFVIIAVPPPVILEIGCGSGAIALSLLCKIPQS-RVLAVDKEEAAVDLTRENVHRL 217
Query: 446 XXXYNIPIKFIKSNWYNNLQNYKKL--FNIIVANPPYIPKGDI-HLNKGDLRFEPINALT 502
I + + Y + ++ + IV+NPPY+ D+ L+ LR+E ++AL
Sbjct: 218 QLQGRIHVLHHNVS-YGSAKHLLPWGPMDFIVSNPPYVFHEDMASLDAEILRYEDLDALD 276
Query: 503 DYSNGLSSIKEIVKNASKYLVKNGLLLIE 531
+G+ IK I+ A L +G + +E
Sbjct: 277 GGDDGMRVIKTILTLAPTLLKDSGSVFLE 305
>UNIPROTKB|I3LL60 [details] [associations]
symbol:HEMK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008276
"protein methyltransferase activity" evidence=IEA] [GO:0008170
"N-methyltransferase activity" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002052 InterPro:IPR002295 InterPro:IPR004556
PRINTS:PR00506 PROSITE:PS00092 GO:GO:0005739 GO:GO:0003677
GO:GO:0006306 GO:GO:0008276 GO:GO:0008170 OMA:FSSWQPH
TIGRFAMs:TIGR00536 GeneTree:ENSGT00390000014125 EMBL:CU467603
EMBL:AEMK01189878 Ensembl:ENSSSCT00000029175 Uniprot:I3LL60
Length = 342
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/211 (23%), Positives = 93/211 (44%)
Query: 335 LHKQEINILNKLIQRRILGE-PIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDLIVKK 393
L + ++ + +L R+ P+ YI G+ +F+GL L + +I RPETE LV+ ++++
Sbjct: 91 LTRWQLRYIQELSSYRLQTRMPVQYIPGEWDFHGLSLKMVPPAIILRPETEELVEWVLEE 150
Query: 394 TFEKKIK--------LLEMGTGSGXXXXXXXXYSKNKIEIIATDISXXXXXXXXXXXXXX 445
++ +LE+G GSG ++IA D
Sbjct: 151 VTQRPHAVGAHGGPLILEVGCGSGAISLSLLSKLPES-QVIAVDKGEAAICLTHENAQRL 209
Query: 446 XXXYNI---PIKF-IKSNWYNNLQNYKKLFNIIVANPPYIPKGDIH-LNKGDLRFEPINA 500
I P+ ++ NW + L + + +++++NPPY+ D+ L L +E A
Sbjct: 210 QLQDRIRIIPLDVTLEQNWAHLLP-WGPV-DLVISNPPYVFHRDMEQLAPEILSYEDPTA 267
Query: 501 LTDYSNGLSSIKEIVKNASKYLVKNGLLLIE 531
L G+ I I+ A + L +G + +E
Sbjct: 268 LDGGEEGMDIITHILALAPRLLKDSGSIFLE 298
>CGD|CAL0005884 [details] [associations]
symbol:orf19.499 species:5476 "Candida albicans" [GO:0006451
"translational readthrough" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR004556 CGD:CAL0005884 GO:GO:0008276 EMBL:AACQ01000055
EMBL:AACQ01000054 eggNOG:COG2890 TIGRFAMs:TIGR00536
RefSeq:XP_717362.1 RefSeq:XP_717451.1 ProteinModelPortal:Q5A6Q5
STRING:Q5A6Q5 GeneID:3640910 GeneID:3640975 KEGG:cal:CaO19.499
KEGG:cal:CaO19.8129 Uniprot:Q5A6Q5
Length = 306
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 51/168 (30%), Positives = 76/168 (45%)
Query: 332 EKKLHKQEI--NILNKLIQRRILGEPIAYIIGKKEFYGLVLNITSDVLIPRPETELLVDL 389
E K KQE+ N + +R P+ YI+G + F GL + VLIPR ETE +
Sbjct: 35 ELKWIKQELPKEDWNDAVNQRYQLVPLQYILGSQPFGGLNIKCKQGVLIPRWETEEWCNK 94
Query: 390 IV---KKTFEKKIKLLEMGTGSGXXXXXXXXYSKNKI--EIIATDISXXXXXXXXXXXXX 444
+V K+T K++ +L+ TG+G + N I +I D+S
Sbjct: 95 LVETLKQTHVKQLVVLDACTGTGCIPLLIG-HELNNIAPKIYGLDVSGKAFDLANENLSL 153
Query: 445 XXXXY-NIPI--KFIKSNWYNNLQNYKKL----FNIIVANPPYIPKGD 485
Y N PI KF + ++ + KL N++ +NPPYIP D
Sbjct: 154 YKQRYPNNPIDLKFYLGDVFD-AEIMDKLGLPKINLLTSNPPYIPYHD 200
>GENEDB_PFALCIPARUM|PF13_0016 [details] [associations]
symbol:PF13_0016 "methyl transferase-like
protein, putative" species:5833 "Plasmodium falciparum" [GO:0008170
"N-methyltransferase activity" evidence=ISS] InterPro:IPR002052
InterPro:IPR004557 PROSITE:PS00092 GO:GO:0003676 InterPro:IPR025714
Pfam:PF13847 EMBL:AL844509 GO:GO:0008170 HOGENOM:HOG000219949
PANTHER:PTHR18895:SF8 RefSeq:XP_001349758.1
ProteinModelPortal:Q8IET4 EnsemblProtists:PF13_0016:mRNA
GeneID:813995 KEGG:pfa:PF13_0016 EuPathDB:PlasmoDB:PF3D7_1303100
OMA:NIRRCEL ProtClustDB:CLSZ2433278 Uniprot:Q8IET4
Length = 222
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 372 ITSDVLIPRPETELLVDLIVKKT--FEKKIKL-LEMGTGSGXXXXXXXXY--SKNK-IEI 425
I +DV +P +T V+ + ++ + I + LEMG+GSG S+NK I++
Sbjct: 20 IRNDVYLPSSDTFTFVEALEEEVDKISQDINIVLEMGSGSGYIILSLYEMLLSRNKKIDM 79
Query: 426 I-ATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKG 484
+ DI+ +N+ I I++N +NN++ + LF+I++ NPPY+ G
Sbjct: 80 LYCVDINKKACECIKNLTYENKI-FNVEI--IRNNLFNNIRRCE-LFDIVLFNPPYVITG 135
Query: 485 DIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGL--LLIEHGYNQSNLVRK 542
+NK DL Y G I + + + YL G+ LL+E +SN+ ++
Sbjct: 136 PDEMNKTDLTASYAGG--KY--GREIIMKFLLDIHNYLSNKGVIYLLLE----KSNIPQE 187
Query: 543 LL 544
+L
Sbjct: 188 IL 189
>UNIPROTKB|Q8IET4 [details] [associations]
symbol:PF13_0016 "Methyl transferase-like protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0008170
"N-methyltransferase activity" evidence=ISS] InterPro:IPR002052
InterPro:IPR004557 PROSITE:PS00092 GO:GO:0003676 InterPro:IPR025714
Pfam:PF13847 EMBL:AL844509 GO:GO:0008170 HOGENOM:HOG000219949
PANTHER:PTHR18895:SF8 RefSeq:XP_001349758.1
ProteinModelPortal:Q8IET4 EnsemblProtists:PF13_0016:mRNA
GeneID:813995 KEGG:pfa:PF13_0016 EuPathDB:PlasmoDB:PF3D7_1303100
OMA:NIRRCEL ProtClustDB:CLSZ2433278 Uniprot:Q8IET4
Length = 222
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 372 ITSDVLIPRPETELLVDLIVKKT--FEKKIKL-LEMGTGSGXXXXXXXXY--SKNK-IEI 425
I +DV +P +T V+ + ++ + I + LEMG+GSG S+NK I++
Sbjct: 20 IRNDVYLPSSDTFTFVEALEEEVDKISQDINIVLEMGSGSGYIILSLYEMLLSRNKKIDM 79
Query: 426 I-ATDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKG 484
+ DI+ +N+ I I++N +NN++ + LF+I++ NPPY+ G
Sbjct: 80 LYCVDINKKACECIKNLTYENKI-FNVEI--IRNNLFNNIRRCE-LFDIVLFNPPYVITG 135
Query: 485 DIHLNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNGL--LLIEHGYNQSNLVRK 542
+NK DL Y G I + + + YL G+ LL+E +SN+ ++
Sbjct: 136 PDEMNKTDLTASYAGG--KY--GREIIMKFLLDIHNYLSNKGVIYLLLE----KSNIPQE 187
Query: 543 LL 544
+L
Sbjct: 188 IL 189
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 51/187 (27%), Positives = 86/187 (45%)
Query: 95 EIKKLILPKDKNDKRNIFIEIRAGTGGDESALFVNDLLRMYIRFSERNYWKFEIISRS-- 152
E+ KL+ +D+ D + I++G+ G +S ++ ++ MYI+++ER + +
Sbjct: 157 EMSKLL--RDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSL 214
Query: 153 LSEIGGYKEIIARIIGLNVYSKLKFESGVHRVQRVPKTETQGRIHTSACTVAVIPEADEI 212
LS G Y L E GVHR+ + T + SA TV +IP
Sbjct: 215 LSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI-ISSTSNE---ECSA-TVDIIPLFLRA 269
Query: 213 E-DININPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFAL 271
D + DL I +Y A H ++ V I HIP+G+ +Q +R++ N+ AL
Sbjct: 270 SPDFEVKEGDL-IVSYPAKE---DH-KIAENMVCIHHIPSGVTLQSSGERNRFANRIKAL 324
Query: 272 KILLARI 278
L A++
Sbjct: 325 NRLKAKL 331
>UNIPROTKB|E2QXR1 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 OMA:ELMSSEA EMBL:AAEX03014643
Ensembl:ENSCAFT00000012030 Uniprot:E2QXR1
Length = 239
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 217 INPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHKNKAFALKILLA 276
++ ++L + G GGQ NKT + V + HIP+GIVV+C RS +N+ A +IL
Sbjct: 128 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARQILQE 187
Query: 277 RIKDSKLREQQSNTAKMRRLLIGSVQ--KKSPLNIFETNILLKYVTRLS 323
++ D + S K ++ Q K+ E LLK + LS
Sbjct: 188 KV-DIFYNGENSIVYKEKQEAEKKKQERKRRAKETLEKKKLLKELRELS 235
>DICTYBASE|DDB_G0292048 [details] [associations]
symbol:DDB_G0292048 "N(6)-adenine-specific DNA
methyltransferase 1" species:44689 "Dictyostelium discoideum"
[GO:0032259 "methylation" evidence=IEA] [GO:0008276 "protein
methyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006479 "protein
methylation" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002052 InterPro:IPR004557 PROSITE:PS00092
dictyBase:DDB_G0292048 EMBL:AAFI02000187 GO:GO:0003676
GO:GO:0008168 eggNOG:COG2890 OMA:GIEASWA PANTHER:PTHR18895:SF8
TIGRFAMs:TIGR00537 RefSeq:XP_629789.1 ProteinModelPortal:Q54DT3
STRING:Q54DT3 EnsemblProtists:DDB0184184 GeneID:8628466
KEGG:ddi:DDB_G0292048 InParanoid:Q54DT3 ProtClustDB:CLSZ2728738
Uniprot:Q54DT3
Length = 257
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 43/186 (23%), Positives = 86/186 (46%)
Query: 375 DVLIPRPETELLVDLIVKKTFE--KKIK---LLEMGTGSGXXXXXXXXYSKNKIE--IIA 427
DV P ++ L +D + +K +E K++K +LE+G+GSG N ++
Sbjct: 28 DVYEPSEDSYLFIDSL-QKDYENIKEMKPFIMLEIGSGSGFVITFLAKLLGNDGSKYYMS 86
Query: 428 TDISXXXXXXXXXXXXXXXXXYNIPIKFIKSNWYNNLQNYKKLFNIIVANPPYIPKGDIH 487
TDI+ N+ + + +++ ++++ K +I++ NPPY+P
Sbjct: 87 TDINPKAAIASSKTSIEN----NVHLDVLNTSFVSSIERLKGSIDILLFNPPYVPTPSEE 142
Query: 488 LNKGDLRFEPINALTDYSNGLSSIKEIVKNASKYLVKNG---LLLIEHGYNQSNLVRKLL 544
+N+G + + + NG I +++ L K G ++L++ N+ V +L
Sbjct: 143 VNEGGI----VASWAGGINGREVIDKLLPQIPSILSKKGFFYIVLVQE--NKPKQVISIL 196
Query: 545 FKYGFS 550
+YGFS
Sbjct: 197 GEYGFS 202
>UNIPROTKB|P40711 [details] [associations]
symbol:arfB "peptidyl-tRNA hydrolase, ribosome rescue
factor" species:83333 "Escherichia coli K-12" [GO:0006415
"translational termination" evidence=IEA] [GO:0003747 "translation
release factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0072344 "rescue of stalled ribosome" evidence=IDA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0043022 EMBL:D49445 EMBL:U70214
GO:GO:0072344 EMBL:L38619 EMBL:U18345 PIR:G64743 RefSeq:NP_414733.1
RefSeq:YP_488494.1 PDB:4DH9 PDBsum:4DH9 ProteinModelPortal:P40711
SMR:P40711 IntAct:P40711 PRIDE:P40711
EnsemblBacteria:EBESCT00000003139 EnsemblBacteria:EBESCT00000014361
GeneID:12934377 GeneID:946046 KEGG:ecj:Y75_p0188 KEGG:eco:b0191
PATRIC:32115495 EchoBASE:EB2258 EcoGene:EG12354 eggNOG:COG1186
HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ ProtClustDB:PRK09256
BioCyc:EcoCyc:EG12354-MONOMER BioCyc:ECOL316407:JW0187-MONOMER
BioCyc:MetaCyc:EG12354-MONOMER Genevestigator:P40711 GO:GO:0004045
GO:GO:0003747 Uniprot:P40711
Length = 140
Score = 83 (34.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 215 ININPADLRIDTYRASGAGGQHINKTDSAVRI 246
+ I +L I RA GAGGQH+NKT +A+ +
Sbjct: 8 VAIPDGELEITAIRAQGAGGQHVNKTSTAIHL 39
Score = 62 (26.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/58 (37%), Positives = 27/58 (46%)
Query: 253 IVVQCQNDRSQHKNKAFALKILLARIKD----SKLREQQSNT-AKMRRLLIGSVQKKS 305
IV++ Q RSQ N+ AL L+A IK+ K R T A R L QK S
Sbjct: 70 IVIKAQEYRSQELNREAALARLVAMIKELTTEKKARRPTRPTRASKERRLASKAQKSS 127
>GENEDB_PFALCIPARUM|PFD0480w [details] [associations]
symbol:PFD0480w "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 EMBL:AL844503
GO:GO:0003747 RefSeq:XP_001351412.1 ProteinModelPortal:Q8I1W0
EnsemblProtists:PFD0480w:mRNA GeneID:812393 KEGG:pfa:PFD0480w
EuPathDB:PlasmoDB:PF3D7_0409700 HOGENOM:HOG000283979
ProtClustDB:CLSZ2432220 Uniprot:Q8I1W0
Length = 194
Score = 106 (42.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 211 EIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT---GIVVQCQNDRSQHKNK 267
++EDI + P+ + + +GAGGQ +NKT++ V I + I+++C R N+
Sbjct: 68 KLEDIGVYPSHMEEMFVKGTGAGGQKVNKTNNCVIIKYKNNQNNNIIIKCHKYRCLQNNR 127
Query: 268 AFALKILLARI---KDSKLRE--QQSNTAKMRRLLIGSVQKKSPLN 308
+A ++L +I K+ RE + K + L + +K +N
Sbjct: 128 IYARELLYKKITSLKEKAEREIIHKEEKEKRKILRLSEKEKNESIN 173
Score = 42 (19.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 133 RMYIRFSERNYWKFEIISRSLSEIGGY 159
++Y+ +N F++I + L +IG Y
Sbjct: 51 KVYLNTLSKN--NFDVIQKKLEDIGVY 75
>UNIPROTKB|Q8I1W0 [details] [associations]
symbol:PFD0480w "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 EMBL:AL844503 GO:GO:0003747
RefSeq:XP_001351412.1 ProteinModelPortal:Q8I1W0
EnsemblProtists:PFD0480w:mRNA GeneID:812393 KEGG:pfa:PFD0480w
EuPathDB:PlasmoDB:PF3D7_0409700 HOGENOM:HOG000283979
ProtClustDB:CLSZ2432220 Uniprot:Q8I1W0
Length = 194
Score = 106 (42.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 211 EIEDININPADLRIDTYRASGAGGQHINKTDSAVRITHIPT---GIVVQCQNDRSQHKNK 267
++EDI + P+ + + +GAGGQ +NKT++ V I + I+++C R N+
Sbjct: 68 KLEDIGVYPSHMEEMFVKGTGAGGQKVNKTNNCVIIKYKNNQNNNIIIKCHKYRCLQNNR 127
Query: 268 AFALKILLARI---KDSKLRE--QQSNTAKMRRLLIGSVQKKSPLN 308
+A ++L +I K+ RE + K + L + +K +N
Sbjct: 128 IYARELLYKKITSLKEKAEREIIHKEEKEKRKILRLSEKEKNESIN 173
Score = 42 (19.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 133 RMYIRFSERNYWKFEIISRSLSEIGGY 159
++Y+ +N F++I + L +IG Y
Sbjct: 51 KVYLNTLSKN--NFDVIQKKLEDIGVY 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 570 545 0.00095 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 608 (65 KB)
Total size of DFA: 277 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 48.53u 0.11s 48.64t Elapsed: 00:01:00
Total cpu time: 48.56u 0.11s 48.67t Elapsed: 00:01:05
Start: Thu Aug 15 14:31:57 2013 End: Thu Aug 15 14:33:02 2013
WARNINGS ISSUED: 1