Query psy2398
Match_columns 433
No_of_seqs 242 out of 3062
Neff 10.2
Searched_HMMs 29240
Date Sat Aug 17 00:00:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 2.1E-53 7.3E-58 415.9 27.8 351 8-431 3-386 (464)
2 2gv8_A Monooxygenase; FMO, FAD 100.0 3.1E-51 1.1E-55 400.1 29.1 347 5-431 4-409 (447)
3 3gwf_A Cyclohexanone monooxyge 100.0 8.7E-46 3E-50 367.1 30.4 367 7-379 8-455 (540)
4 4ap3_A Steroid monooxygenase; 100.0 1.3E-44 4.6E-49 359.3 29.1 368 6-379 20-469 (549)
5 3uox_A Otemo; baeyer-villiger 100.0 2.1E-44 7.3E-49 357.5 29.8 368 6-379 8-464 (545)
6 4a9w_A Monooxygenase; baeyer-v 100.0 8.2E-44 2.8E-48 337.9 29.6 344 7-382 3-353 (357)
7 1w4x_A Phenylacetone monooxyge 100.0 1.2E-43 4.2E-48 353.7 29.7 369 6-380 15-465 (542)
8 3d1c_A Flavin-containing putat 100.0 6.3E-38 2.2E-42 298.9 24.9 316 7-385 4-343 (369)
9 2zbw_A Thioredoxin reductase; 100.0 2.4E-36 8.3E-41 284.1 24.8 296 6-380 4-316 (335)
10 3lzw_A Ferredoxin--NADP reduct 100.0 9.4E-37 3.2E-41 286.4 19.7 291 6-380 6-314 (332)
11 3fbs_A Oxidoreductase; structu 100.0 9.3E-36 3.2E-40 275.2 24.3 281 8-381 3-292 (297)
12 2q7v_A Thioredoxin reductase; 100.0 2.4E-35 8.3E-40 276.0 24.7 287 6-380 7-311 (325)
13 2q0l_A TRXR, thioredoxin reduc 100.0 2.9E-35 9.9E-40 273.8 24.3 287 7-380 1-308 (311)
14 3f8d_A Thioredoxin reductase ( 100.0 1.5E-35 5.3E-40 277.0 22.0 285 7-380 15-316 (323)
15 3ab1_A Ferredoxin--NADP reduct 100.0 8.1E-35 2.8E-39 276.4 23.9 296 6-380 13-327 (360)
16 3itj_A Thioredoxin reductase 1 100.0 4.4E-35 1.5E-39 275.8 20.7 289 6-380 21-334 (338)
17 3r9u_A Thioredoxin reductase; 100.0 3.1E-34 1E-38 267.3 23.2 287 5-379 2-310 (315)
18 2a87_A TRXR, TR, thioredoxin r 100.0 3.2E-34 1.1E-38 269.6 22.6 286 6-379 13-314 (335)
19 3cty_A Thioredoxin reductase; 100.0 9.8E-34 3.4E-38 264.4 23.8 286 7-380 16-315 (319)
20 1trb_A Thioredoxin reductase; 100.0 5.8E-34 2E-38 266.1 21.6 290 6-380 4-313 (320)
21 1vdc_A NTR, NADPH dependent th 100.0 5.4E-34 1.8E-38 267.9 20.7 287 6-379 7-321 (333)
22 1fl2_A Alkyl hydroperoxide red 100.0 1.3E-33 4.3E-38 262.6 21.4 284 8-380 2-304 (310)
23 4a5l_A Thioredoxin reductase; 100.0 9.2E-34 3.1E-38 264.0 19.4 290 6-378 3-309 (314)
24 4gcm_A TRXR, thioredoxin reduc 100.0 2.9E-33 1E-37 260.3 21.0 285 5-378 4-303 (312)
25 3klj_A NAD(FAD)-dependent dehy 100.0 1.8E-34 6.3E-39 274.8 6.0 279 6-380 8-295 (385)
26 3l8k_A Dihydrolipoyl dehydroge 100.0 6.1E-32 2.1E-36 264.8 23.7 299 7-379 4-333 (466)
27 4b63_A L-ornithine N5 monooxyg 100.0 8.1E-32 2.8E-36 265.4 24.2 356 6-379 38-485 (501)
28 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.6E-31 5.5E-36 264.8 26.3 284 6-379 211-514 (521)
29 3oc4_A Oxidoreductase, pyridin 100.0 4.8E-32 1.6E-36 264.7 21.2 290 8-380 3-315 (452)
30 3ef6_A Toluene 1,2-dioxygenase 100.0 8.1E-33 2.8E-37 266.6 14.6 288 8-380 3-310 (410)
31 4fk1_A Putative thioredoxin re 100.0 8.6E-32 2.9E-36 249.4 20.7 284 5-379 4-298 (304)
32 2bc0_A NADH oxidase; flavoprot 100.0 1.8E-32 6.2E-37 270.2 16.5 290 8-380 36-362 (490)
33 1mo9_A ORF3; nucleotide bindin 100.0 2.1E-32 7.3E-37 271.5 16.8 310 5-380 41-379 (523)
34 4eqs_A Coenzyme A disulfide re 100.0 3.1E-32 1.1E-36 264.2 17.5 294 8-382 1-314 (437)
35 2gqw_A Ferredoxin reductase; f 100.0 6.8E-33 2.3E-37 266.9 12.7 292 1-381 1-310 (408)
36 1xhc_A NADH oxidase /nitrite r 100.0 2.2E-33 7.4E-38 266.2 8.7 280 7-380 8-298 (367)
37 3kd9_A Coenzyme A disulfide re 100.0 1.5E-31 5.2E-36 261.0 22.0 288 7-380 3-316 (449)
38 1dxl_A Dihydrolipoamide dehydr 100.0 4E-32 1.4E-36 266.9 17.7 310 5-379 4-342 (470)
39 3lxd_A FAD-dependent pyridine 100.0 8.4E-33 2.9E-37 267.3 12.4 291 6-380 8-322 (415)
40 2hqm_A GR, grase, glutathione 100.0 4.8E-32 1.6E-36 266.4 17.4 307 6-380 10-348 (479)
41 3ics_A Coenzyme A-disulfide re 100.0 2.1E-32 7.1E-37 276.0 15.0 292 6-378 35-352 (588)
42 1onf_A GR, grase, glutathione 100.0 7.2E-32 2.5E-36 266.4 17.6 302 8-380 3-372 (500)
43 2qae_A Lipoamide, dihydrolipoy 100.0 4.7E-32 1.6E-36 266.1 15.9 309 7-379 2-340 (468)
44 1zmd_A Dihydrolipoyl dehydroge 100.0 4.8E-32 1.6E-36 266.4 15.9 309 6-379 5-345 (474)
45 1xdi_A RV3303C-LPDA; reductase 100.0 3.5E-32 1.2E-36 268.9 14.6 308 8-379 3-342 (499)
46 1ebd_A E3BD, dihydrolipoamide 100.0 8.2E-32 2.8E-36 263.4 16.5 305 7-379 3-333 (455)
47 3urh_A Dihydrolipoyl dehydroge 100.0 1E-32 3.5E-37 272.3 10.2 305 7-380 25-364 (491)
48 1v59_A Dihydrolipoamide dehydr 100.0 7.3E-33 2.5E-37 272.6 9.0 308 6-380 4-351 (478)
49 2wpf_A Trypanothione reductase 100.0 8.4E-32 2.9E-36 265.3 16.2 306 6-380 6-356 (495)
50 3ntd_A FAD-dependent pyridine 100.0 1.5E-32 5.2E-37 276.2 10.8 292 8-380 2-339 (565)
51 3iwa_A FAD-dependent pyridine 100.0 2.6E-32 8.9E-37 268.2 12.1 300 7-380 3-330 (472)
52 1ojt_A Surface protein; redox- 100.0 5.9E-32 2E-36 266.1 14.1 305 6-380 5-350 (482)
53 3ic9_A Dihydrolipoamide dehydr 100.0 3.9E-33 1.3E-37 274.7 5.5 304 7-378 8-337 (492)
54 3fg2_P Putative rubredoxin red 100.0 1.9E-32 6.6E-37 263.7 9.9 287 8-380 2-311 (404)
55 2r9z_A Glutathione amide reduc 100.0 2.5E-31 8.6E-36 260.0 17.3 303 6-380 3-328 (463)
56 2a8x_A Dihydrolipoyl dehydroge 100.0 1.2E-31 4.2E-36 262.8 14.8 303 7-378 3-333 (464)
57 3s5w_A L-ornithine 5-monooxyge 100.0 3.9E-31 1.3E-35 259.6 18.4 332 7-377 30-445 (463)
58 4dna_A Probable glutathione re 100.0 2.3E-31 7.7E-36 260.7 16.2 303 6-380 4-332 (463)
59 2eq6_A Pyruvate dehydrogenase 100.0 2.2E-31 7.5E-36 260.6 15.5 302 7-380 6-335 (464)
60 1fec_A Trypanothione reductase 100.0 4.4E-31 1.5E-35 260.0 17.3 308 6-380 2-352 (490)
61 2v3a_A Rubredoxin reductase; a 100.0 6.2E-31 2.1E-35 251.5 17.7 289 6-380 3-307 (384)
62 2yqu_A 2-oxoglutarate dehydrog 100.0 2.6E-31 8.9E-36 259.8 15.3 304 8-379 2-327 (455)
63 3o0h_A Glutathione reductase; 100.0 1.3E-30 4.4E-35 256.7 20.1 305 6-381 25-353 (484)
64 1ges_A Glutathione reductase; 100.0 3.2E-31 1.1E-35 258.5 15.5 303 6-380 3-329 (450)
65 1zk7_A HGII, reductase, mercur 100.0 4.8E-31 1.6E-35 258.8 16.8 305 6-379 3-334 (467)
66 3qfa_A Thioredoxin reductase 1 100.0 2.9E-31 1E-35 262.9 15.0 308 6-380 31-381 (519)
67 3dgh_A TRXR-1, thioredoxin red 100.0 2.1E-31 7.1E-36 262.4 13.5 308 6-380 8-353 (483)
68 2cdu_A NADPH oxidase; flavoenz 100.0 1.2E-31 4E-36 262.1 11.2 293 8-380 1-318 (452)
69 3dk9_A Grase, GR, glutathione 100.0 1.6E-31 5.4E-36 263.0 12.0 302 6-379 19-356 (478)
70 3dgz_A Thioredoxin reductase 2 100.0 1.3E-31 4.3E-36 264.2 10.9 308 6-380 5-353 (488)
71 1lvl_A Dihydrolipoamide dehydr 100.0 1.8E-30 6.2E-35 253.7 18.9 302 6-379 4-330 (458)
72 3lad_A Dihydrolipoamide dehydr 100.0 1.2E-30 4E-35 256.8 17.4 307 6-380 2-344 (476)
73 1q1r_A Putidaredoxin reductase 100.0 1.8E-31 6.3E-36 258.6 10.2 290 7-380 4-320 (431)
74 3cgb_A Pyridine nucleotide-dis 100.0 8.6E-31 2.9E-35 257.5 14.8 291 7-380 36-354 (480)
75 1nhp_A NADH peroxidase; oxidor 100.0 4.9E-30 1.7E-34 250.2 18.7 287 8-380 1-317 (447)
76 2vdc_G Glutamate synthase [NAD 100.0 1E-30 3.6E-35 253.7 12.9 291 6-379 121-442 (456)
77 4b1b_A TRXR, thioredoxin reduc 100.0 5.3E-31 1.8E-35 259.7 9.3 309 8-382 43-387 (542)
78 2x8g_A Thioredoxin glutathione 100.0 1E-28 3.5E-33 249.5 18.7 307 6-380 106-460 (598)
79 3h8l_A NADH oxidase; membrane 100.0 7.7E-30 2.6E-34 246.2 9.2 281 8-380 2-335 (409)
80 4g6h_A Rotenone-insensitive NA 100.0 5.8E-30 2E-34 251.7 6.3 290 6-379 41-399 (502)
81 3sx6_A Sulfide-quinone reducta 100.0 1.7E-28 5.8E-33 238.5 15.1 290 6-380 3-343 (437)
82 1lqt_A FPRA; NADP+ derivative, 100.0 5.6E-29 1.9E-33 241.9 8.7 299 7-380 3-386 (456)
83 3k30_A Histamine dehydrogenase 100.0 1.2E-28 4.2E-33 252.2 9.8 270 6-379 390-673 (690)
84 1m6i_A Programmed cell death p 99.9 1.7E-29 5.7E-34 248.8 0.5 307 6-380 10-353 (493)
85 1o94_A Tmadh, trimethylamine d 99.9 5.5E-28 1.9E-32 248.3 8.1 279 6-380 388-699 (729)
86 1cjc_A Protein (adrenodoxin re 99.9 1E-27 3.5E-32 233.3 9.4 163 5-208 4-201 (460)
87 2gag_A Heterotetrameric sarcos 99.9 5.9E-27 2E-31 246.9 14.7 279 7-383 128-446 (965)
88 1ps9_A 2,4-dienoyl-COA reducta 99.9 5.8E-27 2E-31 239.2 10.3 289 6-376 372-671 (671)
89 3h28_A Sulfide-quinone reducta 99.9 9.6E-27 3.3E-31 225.8 6.1 285 8-380 3-332 (430)
90 3vrd_B FCCB subunit, flavocyto 99.9 5.9E-25 2E-29 211.5 17.5 293 7-385 2-332 (401)
91 1gte_A Dihydropyrimidine dehyd 99.9 1.1E-25 3.6E-30 239.0 11.7 291 7-378 187-505 (1025)
92 1y56_A Hypothetical protein PH 99.9 7.8E-25 2.7E-29 215.5 15.1 256 7-384 108-380 (493)
93 3hyw_A Sulfide-quinone reducta 99.9 1.4E-25 4.9E-30 217.3 3.3 284 8-380 3-332 (430)
94 2gqf_A Hypothetical protein HI 99.7 8.7E-17 3E-21 153.6 6.9 136 7-147 4-171 (401)
95 2cul_A Glucose-inhibited divis 99.6 6E-15 2E-19 130.3 15.1 124 7-147 3-128 (232)
96 3fpz_A Thiazole biosynthetic e 99.6 4.1E-18 1.4E-22 158.9 -8.5 148 7-206 65-216 (326)
97 2ywl_A Thioredoxin reductase r 99.6 7.3E-15 2.5E-19 124.4 9.0 161 175-380 3-170 (180)
98 3v76_A Flavoprotein; structura 99.5 6.2E-14 2.1E-18 134.3 10.5 141 5-148 25-191 (417)
99 2e5v_A L-aspartate oxidase; ar 99.5 9.7E-14 3.3E-18 135.5 10.3 195 9-213 1-248 (472)
100 2ywl_A Thioredoxin reductase r 99.4 2.3E-12 7.8E-17 108.9 13.7 109 7-143 1-109 (180)
101 3cgv_A Geranylgeranyl reductas 99.4 3.2E-12 1.1E-16 122.3 13.6 136 7-144 4-162 (397)
102 3rp8_A Flavoprotein monooxygen 99.4 7.3E-13 2.5E-17 127.3 8.6 137 6-146 22-183 (407)
103 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 1.5E-12 5.2E-17 121.9 9.2 131 8-142 2-163 (342)
104 3fmw_A Oxygenase; mithramycin, 99.3 3.2E-12 1.1E-16 127.4 11.8 137 7-145 49-208 (570)
105 2xdo_A TETX2 protein; tetracyc 99.3 4E-12 1.4E-16 121.7 12.0 137 6-146 25-184 (398)
106 3nix_A Flavoprotein/dehydrogen 99.3 8.2E-12 2.8E-16 120.4 14.3 137 6-144 4-166 (421)
107 2qa1_A PGAE, polyketide oxygen 99.3 7.5E-12 2.5E-16 123.0 14.0 140 4-145 8-166 (500)
108 2qa2_A CABE, polyketide oxygen 99.3 8.3E-12 2.8E-16 122.7 12.9 139 5-145 10-167 (499)
109 3ihg_A RDME; flavoenzyme, anth 99.3 2.7E-11 9.4E-16 120.4 15.8 138 5-144 3-183 (535)
110 2vou_A 2,6-dihydroxypyridine h 99.3 5E-12 1.7E-16 121.0 9.6 131 6-145 4-154 (397)
111 3ces_A MNMG, tRNA uridine 5-ca 99.3 5.7E-12 2E-16 125.0 10.3 174 6-204 27-221 (651)
112 3alj_A 2-methyl-3-hydroxypyrid 99.3 4.7E-12 1.6E-16 120.3 9.2 131 7-145 11-161 (379)
113 3e1t_A Halogenase; flavoprotei 99.3 1.9E-11 6.5E-16 120.8 13.9 143 1-145 1-173 (512)
114 2x3n_A Probable FAD-dependent 99.3 3.9E-12 1.3E-16 121.8 8.5 139 5-145 4-167 (399)
115 1yvv_A Amine oxidase, flavin-c 99.3 3.9E-11 1.3E-15 111.9 15.1 136 8-147 3-165 (336)
116 2i0z_A NAD(FAD)-utilizing dehy 99.3 1E-11 3.5E-16 120.6 10.4 139 7-147 26-194 (447)
117 3dje_A Fructosyl amine: oxygen 99.3 2.7E-11 9.1E-16 117.5 13.4 63 85-149 160-226 (438)
118 3oz2_A Digeranylgeranylglycero 99.3 2.9E-11 9.9E-16 115.4 13.4 137 7-145 4-163 (397)
119 2bry_A NEDD9 interacting prote 99.3 7E-12 2.4E-16 123.1 7.7 132 6-146 91-232 (497)
120 3nlc_A Uncharacterized protein 99.2 7.6E-11 2.6E-15 116.1 14.0 136 7-144 107-277 (549)
121 2gmh_A Electron transfer flavo 99.2 1.7E-10 5.9E-15 115.4 15.7 137 7-145 35-218 (584)
122 2r0c_A REBC; flavin adenine di 99.2 8.7E-11 3E-15 116.9 13.5 134 7-145 26-197 (549)
123 3dme_A Conserved exported prot 99.2 7.8E-11 2.7E-15 111.3 12.5 60 84-145 148-210 (369)
124 3atr_A Conserved archaeal prot 99.2 3.2E-11 1.1E-15 117.4 9.6 134 6-145 5-163 (453)
125 2zxi_A TRNA uridine 5-carboxym 99.2 3.7E-11 1.3E-15 118.8 9.8 175 6-205 26-221 (637)
126 1rp0_A ARA6, thiazole biosynth 99.2 2.8E-10 9.5E-15 103.4 14.4 130 7-143 39-190 (284)
127 1k0i_A P-hydroxybenzoate hydro 99.2 2.3E-11 8E-16 116.2 7.5 137 8-146 3-165 (394)
128 3cp8_A TRNA uridine 5-carboxym 99.2 7.5E-11 2.6E-15 117.0 11.0 177 6-205 20-216 (641)
129 4hb9_A Similarities with proba 99.2 5.8E-11 2E-15 113.9 9.9 134 8-146 2-168 (412)
130 3i3l_A Alkylhalidase CMLS; fla 99.2 3.1E-10 1E-14 113.4 15.2 136 7-144 23-188 (591)
131 2uzz_A N-methyl-L-tryptophan o 99.2 1.1E-10 3.7E-15 110.5 11.3 63 85-150 148-210 (372)
132 3ps9_A TRNA 5-methylaminomethy 99.2 2.5E-10 8.6E-15 116.6 14.4 60 84-145 415-474 (676)
133 1y56_B Sarcosine oxidase; dehy 99.1 2.4E-10 8.3E-15 108.6 12.6 58 84-144 147-205 (382)
134 3c96_A Flavin-containing monoo 99.1 1.9E-10 6.6E-15 110.4 11.8 138 7-146 4-171 (410)
135 2dkh_A 3-hydroxybenzoate hydro 99.1 3E-10 1E-14 115.0 13.6 140 6-145 31-212 (639)
136 1ryi_A Glycine oxidase; flavop 99.1 2.2E-10 7.6E-15 108.8 11.4 61 82-145 160-220 (382)
137 3nyc_A D-arginine dehydrogenas 99.1 8.3E-11 2.9E-15 111.7 8.0 59 84-145 152-210 (381)
138 1y0p_A Fumarate reductase flav 99.1 7.9E-10 2.7E-14 110.6 14.5 137 7-145 126-318 (571)
139 3pvc_A TRNA 5-methylaminomethy 99.1 3E-10 1E-14 116.2 11.5 60 84-145 410-470 (689)
140 1qo8_A Flavocytochrome C3 fuma 99.1 1.1E-09 3.7E-14 109.5 14.7 138 6-145 120-313 (566)
141 4dgk_A Phytoene dehydrogenase; 99.1 5.9E-10 2E-14 109.9 12.6 54 88-143 223-277 (501)
142 3k7m_X 6-hydroxy-L-nicotine ox 99.1 5.9E-10 2E-14 107.7 11.4 41 7-47 1-41 (431)
143 2oln_A NIKD protein; flavoprot 99.1 6.2E-10 2.1E-14 106.3 11.4 57 85-144 152-208 (397)
144 2gf3_A MSOX, monomeric sarcosi 99.1 2.1E-09 7.2E-14 102.3 14.5 58 85-145 149-206 (389)
145 2gag_B Heterotetrameric sarcos 99.0 1.4E-09 4.9E-14 104.0 12.3 59 83-144 171-230 (405)
146 3jsk_A Cypbp37 protein; octame 99.0 2.2E-09 7.5E-14 98.6 11.7 131 7-144 79-251 (344)
147 2qcu_A Aerobic glycerol-3-phos 99.0 8.5E-09 2.9E-13 101.4 16.3 60 84-145 147-211 (501)
148 1pn0_A Phenol 2-monooxygenase; 99.0 2E-09 6.8E-14 109.3 11.4 137 7-145 8-231 (665)
149 3da1_A Glycerol-3-phosphate de 99.0 2.6E-09 9E-14 106.3 11.7 59 84-144 168-232 (561)
150 3i6d_A Protoporphyrinogen oxid 99.0 6.3E-09 2.1E-13 101.6 14.2 41 104-144 249-289 (470)
151 4at0_A 3-ketosteroid-delta4-5a 98.9 1.3E-08 4.4E-13 100.4 15.8 39 7-45 41-79 (510)
152 3c4n_A Uncharacterized protein 98.9 3.5E-10 1.2E-14 108.4 4.3 58 84-144 170-236 (405)
153 2aqj_A Tryptophan halogenase, 98.9 2E-09 6.7E-14 107.0 9.8 60 83-145 162-223 (538)
154 1d4d_A Flavocytochrome C fumar 98.9 2.2E-08 7.5E-13 100.0 16.7 137 7-145 126-318 (572)
155 2e4g_A Tryptophan halogenase; 98.9 1.9E-09 6.5E-14 107.3 9.0 60 83-145 191-253 (550)
156 2yqu_A 2-oxoglutarate dehydrog 98.9 1.3E-08 4.6E-13 98.9 14.4 102 6-149 166-267 (455)
157 3ka7_A Oxidoreductase; structu 98.9 5.4E-09 1.8E-13 100.7 11.4 40 8-47 1-40 (425)
158 2pyx_A Tryptophan halogenase; 98.9 1E-08 3.6E-13 101.5 13.2 60 83-145 172-234 (526)
159 3nrn_A Uncharacterized protein 98.9 4.8E-09 1.6E-13 101.0 10.3 41 8-48 1-41 (421)
160 1s3e_A Amine oxidase [flavin-c 98.9 7.4E-09 2.5E-13 102.5 11.1 42 6-47 3-44 (520)
161 2weu_A Tryptophan 5-halogenase 98.9 5.4E-09 1.9E-13 103.3 9.7 60 83-145 170-231 (511)
162 1pj5_A N,N-dimethylglycine oxi 98.9 8.8E-09 3E-13 107.6 11.3 58 84-144 149-207 (830)
163 2v3a_A Rubredoxin reductase; a 98.9 2.6E-08 9.1E-13 94.5 13.7 101 7-148 145-245 (384)
164 3kkj_A Amine oxidase, flavin-c 98.8 2.1E-09 7.2E-14 97.1 5.8 41 8-48 3-43 (336)
165 2eq6_A Pyruvate dehydrogenase 98.8 2.9E-08 1E-12 96.6 14.2 102 7-150 169-275 (464)
166 2gjc_A Thiazole biosynthetic e 98.8 2.2E-08 7.6E-13 91.4 12.2 104 7-117 65-176 (326)
167 2r9z_A Glutathione amide reduc 98.8 5.1E-08 1.7E-12 94.9 14.4 102 6-149 165-267 (463)
168 1ges_A Glutathione reductase; 98.8 5E-08 1.7E-12 94.6 13.4 102 6-149 166-268 (450)
169 1ebd_A E3BD, dihydrolipoamide 98.8 6.3E-08 2.1E-12 94.1 13.9 102 6-149 169-273 (455)
170 4b1b_A TRXR, thioredoxin reduc 98.8 8.6E-08 2.9E-12 94.5 14.6 103 4-149 220-322 (542)
171 3lov_A Protoporphyrinogen oxid 98.8 1.6E-08 5.6E-13 98.9 9.1 40 7-46 4-45 (475)
172 2wdq_A Succinate dehydrogenase 98.8 2.3E-08 7.9E-13 100.0 10.1 142 1-145 1-207 (588)
173 1v59_A Dihydrolipoamide dehydr 98.7 9E-08 3.1E-12 93.6 13.6 102 6-149 182-290 (478)
174 1kf6_A Fumarate reductase flav 98.7 8.8E-08 3E-12 96.0 13.5 138 6-146 4-199 (602)
175 3c4a_A Probable tryptophan hyd 98.7 3.4E-09 1.2E-13 100.6 2.6 121 8-145 1-144 (381)
176 1ojt_A Surface protein; redox- 98.7 7.8E-08 2.7E-12 94.1 11.9 101 6-148 184-288 (482)
177 3axb_A Putative oxidoreductase 98.7 6.8E-08 2.3E-12 93.7 11.4 58 84-144 179-254 (448)
178 2rgh_A Alpha-glycerophosphate 98.7 1.2E-07 4E-12 94.6 13.3 39 6-44 31-69 (571)
179 1onf_A GR, grase, glutathione 98.7 1.6E-07 5.3E-12 92.4 14.0 101 7-149 176-278 (500)
180 2hqm_A GR, grase, glutathione 98.7 1.3E-07 4.3E-12 92.5 13.1 101 6-148 184-287 (479)
181 1nhp_A NADH peroxidase; oxidor 98.7 6.7E-08 2.3E-12 93.7 11.0 102 6-149 148-249 (447)
182 1xdi_A RV3303C-LPDA; reductase 98.7 1.8E-07 6.3E-12 91.9 14.0 101 6-148 181-281 (499)
183 1zmd_A Dihydrolipoyl dehydroge 98.7 1.8E-07 6.2E-12 91.3 13.6 103 6-149 177-285 (474)
184 2a8x_A Dihydrolipoyl dehydroge 98.7 1.7E-07 6E-12 91.2 13.2 102 6-149 170-274 (464)
185 1chu_A Protein (L-aspartate ox 98.7 6E-08 2.1E-12 96.0 9.9 39 5-44 6-44 (540)
186 1fec_A Trypanothione reductase 98.7 2E-07 7E-12 91.3 13.4 102 6-149 186-291 (490)
187 1lvl_A Dihydrolipoamide dehydr 98.7 9.1E-08 3.1E-12 93.0 10.8 101 6-150 170-272 (458)
188 2qae_A Lipoamide, dihydrolipoy 98.7 2.2E-07 7.6E-12 90.5 13.6 102 6-149 173-279 (468)
189 2wpf_A Trypanothione reductase 98.7 2.2E-07 7.6E-12 91.1 13.6 101 6-148 190-294 (495)
190 1mo9_A ORF3; nucleotide bindin 98.7 1.7E-07 5.7E-12 92.7 12.8 99 8-148 215-318 (523)
191 2bs2_A Quinol-fumarate reducta 98.7 3.1E-07 1.1E-11 92.7 14.8 38 5-42 3-40 (660)
192 3oc4_A Oxidoreductase, pyridin 98.6 3E-07 1E-11 89.2 14.1 101 7-149 147-247 (452)
193 3iwa_A FAD-dependent pyridine 98.6 1.9E-07 6.6E-12 91.1 12.8 101 7-148 159-260 (472)
194 3lxd_A FAD-dependent pyridine 98.6 2.9E-07 1E-11 88.3 13.8 101 7-148 152-253 (415)
195 3urh_A Dihydrolipoyl dehydroge 98.6 3.6E-07 1.2E-11 89.6 14.6 102 6-149 197-303 (491)
196 3ic9_A Dihydrolipoamide dehydr 98.6 3.4E-07 1.2E-11 89.7 14.3 102 6-150 173-278 (492)
197 3o0h_A Glutathione reductase; 98.6 2.1E-07 7.3E-12 91.1 12.8 102 6-149 190-291 (484)
198 1zk7_A HGII, reductase, mercur 98.6 2.9E-07 9.8E-12 89.7 13.7 99 6-148 175-273 (467)
199 3ef6_A Toluene 1,2-dioxygenase 98.6 1E-07 3.4E-12 91.3 10.2 101 7-148 143-243 (410)
200 2e1m_A L-glutamate oxidase; L- 98.6 3E-08 1E-12 92.9 6.2 45 5-49 42-87 (376)
201 2gqw_A Ferredoxin reductase; f 98.6 2.6E-07 8.8E-12 88.4 12.8 97 7-148 145-241 (408)
202 3fg2_P Putative rubredoxin red 98.6 3.9E-07 1.3E-11 87.0 13.9 101 7-148 142-243 (404)
203 1dxl_A Dihydrolipoamide dehydr 98.6 1.8E-07 6.2E-12 91.3 11.8 102 6-149 176-282 (470)
204 3lad_A Dihydrolipoamide dehydr 98.6 4.4E-07 1.5E-11 88.7 14.1 102 6-149 179-283 (476)
205 3ntd_A FAD-dependent pyridine 98.6 3.4E-07 1.2E-11 91.5 13.5 100 7-148 151-269 (565)
206 2cdu_A NADPH oxidase; flavoenz 98.6 3.8E-07 1.3E-11 88.4 13.4 102 7-149 149-250 (452)
207 1q1r_A Putidaredoxin reductase 98.6 3.5E-07 1.2E-11 88.1 12.7 100 7-147 149-251 (431)
208 2h88_A Succinate dehydrogenase 98.6 4.4E-07 1.5E-11 90.9 13.6 59 85-145 154-218 (621)
209 4gde_A UDP-galactopyranose mut 98.6 2.6E-08 8.9E-13 98.4 4.4 43 5-47 8-51 (513)
210 4gut_A Lysine-specific histone 98.6 1.6E-07 5.6E-12 96.3 10.4 39 7-45 336-374 (776)
211 2bc0_A NADH oxidase; flavoprot 98.6 3.3E-07 1.1E-11 89.8 11.8 102 6-149 193-294 (490)
212 3cgb_A Pyridine nucleotide-dis 98.6 2.6E-07 8.9E-12 90.3 10.9 100 6-148 185-284 (480)
213 3s5w_A L-ornithine 5-monooxyge 98.5 7.1E-07 2.4E-11 86.9 13.7 164 6-181 226-417 (463)
214 3dk9_A Grase, GR, glutathione 98.5 9.5E-07 3.2E-11 86.3 14.0 102 6-149 186-296 (478)
215 4dna_A Probable glutathione re 98.5 7.6E-07 2.6E-11 86.6 13.0 101 6-149 169-271 (463)
216 1m6i_A Programmed cell death p 98.5 1E-06 3.5E-11 86.4 13.7 101 7-148 180-284 (493)
217 1v0j_A UDP-galactopyranose mut 98.5 1.2E-07 4E-12 90.4 5.8 49 1-49 1-50 (399)
218 1xhc_A NADH oxidase /nitrite r 98.5 4E-07 1.4E-11 85.7 9.3 93 8-148 144-236 (367)
219 2b9w_A Putative aminooxidase; 98.4 2E-07 7E-12 89.6 6.7 48 1-49 1-49 (424)
220 3dgh_A TRXR-1, thioredoxin red 98.4 2.3E-06 8E-11 83.6 14.1 100 6-148 186-291 (483)
221 2bcg_G Secretory pathway GDP d 98.4 1.9E-07 6.4E-12 90.6 6.1 43 6-48 10-52 (453)
222 3ics_A Coenzyme A-disulfide re 98.4 1.1E-06 3.7E-11 88.3 11.8 98 7-148 187-284 (588)
223 2zbw_A Thioredoxin reductase; 98.4 1.4E-06 4.8E-11 80.8 11.5 98 7-148 152-254 (335)
224 4eqs_A Coenzyme A disulfide re 98.4 6.9E-07 2.3E-11 86.1 9.6 96 7-148 147-242 (437)
225 3d1c_A Flavin-containing putat 98.4 1.4E-06 4.9E-11 81.9 11.6 107 7-148 166-274 (369)
226 1trb_A Thioredoxin reductase; 98.4 1.9E-06 6.4E-11 79.4 12.1 98 7-148 145-249 (320)
227 3l8k_A Dihydrolipoyl dehydroge 98.4 1.9E-06 6.5E-11 83.9 12.6 100 6-149 171-275 (466)
228 3gyx_A Adenylylsulfate reducta 98.4 3.4E-08 1.2E-12 99.6 -0.6 35 7-41 22-62 (662)
229 3dgz_A Thioredoxin reductase 2 98.4 4.4E-06 1.5E-10 81.8 14.4 101 6-149 184-290 (488)
230 1jnr_A Adenylylsulfate reducta 98.4 8.2E-06 2.8E-10 82.5 16.6 35 7-41 22-60 (643)
231 1rsg_A FMS1 protein; FAD bindi 98.3 2.6E-07 8.8E-12 91.3 4.5 42 6-47 7-49 (516)
232 3hdq_A UDP-galactopyranose mut 98.3 4.7E-07 1.6E-11 85.5 5.9 44 6-49 28-71 (397)
233 3kd9_A Coenzyme A disulfide re 98.3 1.9E-06 6.4E-11 83.5 10.1 99 7-148 148-246 (449)
234 3ab1_A Ferredoxin--NADP reduct 98.3 3.2E-06 1.1E-10 79.3 10.8 98 7-148 163-265 (360)
235 4dsg_A UDP-galactopyranose mut 98.3 7E-07 2.4E-11 87.3 6.0 44 5-48 7-51 (484)
236 2yg5_A Putrescine oxidase; oxi 98.3 4.7E-07 1.6E-11 87.9 4.6 42 6-47 4-45 (453)
237 2jae_A L-amino acid oxidase; o 98.2 1.1E-06 3.8E-11 86.1 6.2 42 5-46 9-50 (489)
238 3qfa_A Thioredoxin reductase 1 98.2 1.9E-05 6.5E-10 77.8 15.1 101 6-149 209-318 (519)
239 3nks_A Protoporphyrinogen oxid 98.2 9.5E-07 3.2E-11 86.3 5.0 41 8-48 3-45 (477)
240 2ivd_A PPO, PPOX, protoporphyr 98.2 1.1E-06 3.6E-11 86.0 5.3 42 6-47 15-56 (478)
241 1sez_A Protoporphyrinogen oxid 98.2 1.3E-06 4.5E-11 85.9 5.5 43 6-48 12-54 (504)
242 4g6h_A Rotenone-insensitive NA 98.2 5E-06 1.7E-10 81.4 9.4 95 8-142 218-330 (502)
243 1i8t_A UDP-galactopyranose mut 98.2 1.3E-06 4.5E-11 82.1 5.1 41 8-48 2-42 (367)
244 2x8g_A Thioredoxin glutathione 98.2 2.9E-05 9.8E-10 78.0 15.1 100 6-148 285-397 (598)
245 1rp0_A ARA6, thiazole biosynth 98.2 4E-06 1.4E-10 75.8 8.0 34 174-207 40-74 (284)
246 2iid_A L-amino-acid oxidase; f 98.1 1.7E-06 5.7E-11 85.1 5.6 43 5-47 31-73 (498)
247 2q7v_A Thioredoxin reductase; 98.1 1.3E-05 4.5E-10 73.8 11.2 95 7-148 152-251 (325)
248 3itj_A Thioredoxin reductase 1 98.1 8.8E-06 3E-10 75.3 10.0 95 7-148 173-273 (338)
249 2bi7_A UDP-galactopyranose mut 98.1 1.8E-06 6E-11 81.7 5.3 41 8-48 4-44 (384)
250 2q0l_A TRXR, thioredoxin reduc 98.1 8.9E-06 3E-10 74.5 9.6 95 7-148 143-243 (311)
251 3f8d_A Thioredoxin reductase ( 98.1 1.2E-05 4.2E-10 73.8 10.6 94 7-147 154-252 (323)
252 2vvm_A Monoamine oxidase N; FA 98.1 1.9E-06 6.4E-11 84.6 5.2 39 8-46 40-78 (495)
253 3hyw_A Sulfide-quinone reducta 98.1 5E-06 1.7E-10 80.0 7.5 105 174-321 3-112 (430)
254 3cty_A Thioredoxin reductase; 98.1 2.1E-05 7.1E-10 72.3 11.2 94 7-148 155-254 (319)
255 1fl2_A Alkyl hydroperoxide red 98.1 2.2E-05 7.4E-10 71.8 11.1 94 7-148 144-244 (310)
256 3klj_A NAD(FAD)-dependent dehy 98.1 1.7E-06 5.9E-11 81.8 3.7 88 7-148 146-233 (385)
257 1d5t_A Guanine nucleotide diss 98.1 3.9E-06 1.3E-10 80.7 6.3 44 6-49 5-48 (433)
258 1c0p_A D-amino acid oxidase; a 98.1 3.9E-06 1.3E-10 78.8 6.0 36 5-40 4-39 (363)
259 3r9u_A Thioredoxin reductase; 98.0 1.4E-05 4.7E-10 73.2 9.1 95 7-148 147-246 (315)
260 3ihm_A Styrene monooxygenase A 98.0 3E-06 1E-10 81.5 4.1 34 7-40 22-55 (430)
261 3fbs_A Oxidoreductase; structu 98.0 2.1E-05 7.2E-10 71.3 9.4 88 7-148 141-228 (297)
262 1vdc_A NTR, NADPH dependent th 98.0 1.8E-05 6.1E-10 73.2 9.0 95 7-148 159-261 (333)
263 3p1w_A Rabgdi protein; GDI RAB 98.0 5.8E-06 2E-10 79.7 5.3 44 6-49 19-62 (475)
264 3vrd_B FCCB subunit, flavocyto 98.0 9.8E-06 3.3E-10 77.2 6.8 106 172-323 1-113 (401)
265 1b37_A Protein (polyamine oxid 98.0 6.3E-06 2.2E-10 80.3 5.5 43 6-48 3-46 (472)
266 3lzw_A Ferredoxin--NADP reduct 98.0 3.1E-05 1.1E-09 71.4 9.9 94 7-148 154-252 (332)
267 2xve_A Flavin-containing monoo 97.9 3.8E-05 1.3E-09 74.5 10.7 84 7-150 197-280 (464)
268 2a87_A TRXR, TR, thioredoxin r 97.9 1.2E-05 4.2E-10 74.4 6.6 96 7-149 155-255 (335)
269 3sx6_A Sulfide-quinone reducta 97.9 1.6E-05 5.6E-10 76.6 7.1 108 174-324 5-118 (437)
270 2z3y_A Lysine-specific histone 97.9 1.1E-05 3.7E-10 81.9 5.6 42 6-47 106-147 (662)
271 2cul_A Glucose-inhibited divis 97.9 1.2E-05 4E-10 70.3 5.0 176 174-380 4-231 (232)
272 2xag_A Lysine-specific histone 97.9 1.3E-05 4.4E-10 82.9 6.0 42 6-47 277-318 (852)
273 2gv8_A Monooxygenase; FMO, FAD 97.9 4.2E-05 1.4E-09 73.9 9.3 83 7-150 212-296 (447)
274 3pl8_A Pyranose 2-oxidase; sub 97.8 1.2E-05 4.2E-10 80.7 5.3 41 6-46 45-85 (623)
275 3g5s_A Methylenetetrahydrofola 97.8 2.3E-05 7.9E-10 72.6 5.9 36 7-42 1-36 (443)
276 3k30_A Histamine dehydrogenase 97.8 2.4E-05 8.3E-10 79.9 6.3 98 7-147 523-625 (690)
277 3h8l_A NADH oxidase; membrane 97.8 3.9E-05 1.3E-09 73.2 7.3 35 174-208 2-39 (409)
278 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00011 3.8E-09 72.3 10.4 94 7-148 355-455 (521)
279 3h28_A Sulfide-quinone reducta 97.7 5.3E-05 1.8E-09 72.8 7.9 107 174-323 3-114 (430)
280 3g3e_A D-amino-acid oxidase; F 97.7 1.5E-05 5E-10 74.4 3.4 33 8-40 1-39 (351)
281 2gag_A Heterotetrameric sarcos 97.6 0.00018 6.1E-09 76.1 10.4 90 8-148 285-385 (965)
282 4a5l_A Thioredoxin reductase; 97.6 0.00014 4.7E-09 66.5 8.5 34 7-40 152-185 (314)
283 4a9w_A Monooxygenase; baeyer-v 97.6 9.2E-05 3.2E-09 68.8 6.3 33 7-40 163-195 (357)
284 2vdc_G Glutamate synthase [NAD 97.5 0.00018 6E-09 69.5 8.3 36 6-41 263-299 (456)
285 1o94_A Tmadh, trimethylamine d 97.5 0.00013 4.4E-09 74.9 6.8 98 7-148 528-648 (729)
286 3ayj_A Pro-enzyme of L-phenyla 97.5 3.4E-05 1.2E-09 77.8 2.5 36 7-42 56-100 (721)
287 4fk1_A Putative thioredoxin re 97.5 0.00018 6.1E-09 65.5 7.0 32 175-206 8-39 (304)
288 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00059 2E-08 69.4 10.8 130 6-147 493-629 (671)
289 3gwf_A Cyclohexanone monooxyge 97.4 0.0019 6.4E-08 63.7 13.7 33 174-206 9-42 (540)
290 4gcm_A TRXR, thioredoxin reduc 97.3 0.00072 2.5E-08 61.7 9.4 36 7-42 145-180 (312)
291 4ap3_A Steroid monooxygenase; 97.3 0.00099 3.4E-08 65.9 11.0 33 174-206 22-54 (549)
292 3alj_A 2-methyl-3-hydroxypyrid 97.3 0.00084 2.9E-08 63.1 9.5 35 173-207 11-45 (379)
293 1lqt_A FPRA; NADP+ derivative, 97.3 0.00092 3.1E-08 64.5 9.9 36 7-42 147-203 (456)
294 1cjc_A Protein (adrenodoxin re 97.3 0.0013 4.5E-08 63.5 10.9 35 7-41 145-200 (460)
295 3uox_A Otemo; baeyer-villiger 97.3 0.0011 3.9E-08 65.4 10.5 33 174-206 10-42 (545)
296 1kdg_A CDH, cellobiose dehydro 97.2 0.00022 7.6E-09 70.7 5.1 36 6-41 6-41 (546)
297 1gte_A Dihydropyrimidine dehyd 97.2 0.0026 9.1E-08 67.7 13.5 92 7-142 332-440 (1025)
298 2vou_A 2,6-dihydroxypyridine h 97.2 0.00054 1.8E-08 64.9 6.9 35 173-207 5-39 (397)
299 2bry_A NEDD9 interacting prote 97.2 0.00024 8.3E-09 69.4 4.4 35 173-207 92-126 (497)
300 1vg0_A RAB proteins geranylger 97.2 0.00044 1.5E-08 68.8 6.2 44 6-49 7-50 (650)
301 3t37_A Probable dehydrogenase; 97.1 0.00025 8.6E-09 69.9 4.3 36 6-41 16-52 (526)
302 3v76_A Flavoprotein; structura 97.1 0.0003 1E-08 67.1 3.9 34 174-207 28-61 (417)
303 1ju2_A HydroxynitrIle lyase; f 97.0 0.00031 1.1E-08 69.3 3.6 35 7-42 26-60 (536)
304 3q9t_A Choline dehydrogenase a 97.0 0.00043 1.5E-08 68.7 4.4 36 6-41 5-41 (577)
305 1n4w_A CHOD, cholesterol oxida 97.0 0.00054 1.8E-08 67.1 5.0 38 6-43 4-41 (504)
306 2xdo_A TETX2 protein; tetracyc 96.9 0.0048 1.6E-07 58.3 10.8 35 173-207 26-60 (398)
307 2x3n_A Probable FAD-dependent 96.9 0.0026 8.7E-08 60.2 8.9 34 174-207 7-40 (399)
308 3qvp_A Glucose oxidase; oxidor 96.8 0.00072 2.5E-08 67.1 4.4 35 6-40 18-53 (583)
309 4b63_A L-ornithine N5 monooxyg 96.8 0.0057 1.9E-07 59.8 10.6 36 6-41 245-282 (501)
310 1w4x_A Phenylacetone monooxyge 96.8 0.0035 1.2E-07 61.9 9.0 33 174-206 17-49 (542)
311 1coy_A Cholesterol oxidase; ox 96.8 0.00099 3.4E-08 65.2 5.0 36 6-41 10-45 (507)
312 4hb9_A Similarities with proba 96.8 0.0025 8.6E-08 60.3 7.6 34 174-207 2-35 (412)
313 3nlc_A Uncharacterized protein 96.8 0.00097 3.3E-08 65.6 4.6 34 173-206 107-140 (549)
314 1gpe_A Protein (glucose oxidas 96.7 0.0011 3.9E-08 66.0 4.9 37 6-42 23-60 (587)
315 2jbv_A Choline oxidase; alcoho 96.7 0.0011 3.6E-08 65.6 4.7 37 6-42 12-49 (546)
316 1yvv_A Amine oxidase, flavin-c 96.6 0.011 3.7E-07 54.2 10.7 33 174-206 3-35 (336)
317 2g1u_A Hypothetical protein TM 96.6 0.002 7E-08 52.0 4.9 36 5-40 17-52 (155)
318 3llv_A Exopolyphosphatase-rela 96.6 0.0024 8.2E-08 50.6 5.2 35 6-40 5-39 (141)
319 3fim_B ARYL-alcohol oxidase; A 96.6 0.00086 3E-08 66.3 2.9 36 7-42 2-38 (566)
320 3rp8_A Flavoprotein monooxygen 96.6 0.0088 3E-07 56.6 9.8 36 172-207 22-57 (407)
321 2gqf_A Hypothetical protein HI 96.5 0.0016 5.5E-08 61.7 4.3 33 175-207 6-38 (401)
322 3ces_A MNMG, tRNA uridine 5-ca 96.4 0.0068 2.3E-07 60.4 7.8 33 174-206 29-61 (651)
323 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.0054 1.8E-07 52.5 5.9 36 170-205 28-63 (223)
324 3nix_A Flavoprotein/dehydrogen 96.2 0.0045 1.5E-07 58.9 5.5 33 174-206 6-38 (421)
325 1k0i_A P-hydroxybenzoate hydro 96.1 0.0075 2.6E-07 56.8 6.4 33 175-207 4-36 (394)
326 3qj4_A Renalase; FAD/NAD(P)-bi 96.1 0.015 5.3E-07 53.5 8.1 33 174-206 2-37 (342)
327 3fwz_A Inner membrane protein 96.0 0.0098 3.4E-07 46.9 5.7 34 7-40 7-40 (140)
328 1lss_A TRK system potassium up 96.0 0.0069 2.3E-07 47.6 4.6 34 7-40 4-37 (140)
329 3cp8_A TRNA uridine 5-carboxym 96.0 0.02 6.8E-07 57.0 8.7 33 174-206 22-54 (641)
330 2i0z_A NAD(FAD)-utilizing dehy 95.9 0.0095 3.3E-07 57.2 6.3 33 175-207 28-60 (447)
331 2hmt_A YUAA protein; RCK, KTN, 95.9 0.0085 2.9E-07 47.2 4.9 35 6-40 5-39 (144)
332 3ic5_A Putative saccharopine d 95.9 0.0072 2.5E-07 45.8 4.3 35 6-40 4-39 (118)
333 2zxi_A TRNA uridine 5-carboxym 95.9 0.015 5.3E-07 57.6 7.5 32 175-206 29-60 (637)
334 1id1_A Putative potassium chan 95.8 0.014 4.9E-07 46.7 5.7 33 7-39 3-35 (153)
335 3i3l_A Alkylhalidase CMLS; fla 95.7 0.029 9.7E-07 55.9 8.8 34 173-206 23-56 (591)
336 3atr_A Conserved archaeal prot 95.7 0.013 4.6E-07 56.3 6.1 33 175-207 8-40 (453)
337 3ado_A Lambda-crystallin; L-gu 95.6 0.012 4.3E-07 53.2 5.1 39 1-40 1-39 (319)
338 1y6j_A L-lactate dehydrogenase 95.5 0.012 4.1E-07 53.6 4.9 40 1-40 1-42 (318)
339 1f0y_A HCDH, L-3-hydroxyacyl-C 95.2 0.02 6.9E-07 51.7 5.3 35 6-40 14-48 (302)
340 3g0o_A 3-hydroxyisobutyrate de 95.2 0.017 6E-07 52.2 4.9 40 1-40 1-40 (303)
341 2dpo_A L-gulonate 3-dehydrogen 95.2 0.019 6.6E-07 52.2 5.1 36 5-40 4-39 (319)
342 1y56_A Hypothetical protein PH 95.2 0.038 1.3E-06 53.7 7.6 48 96-147 267-314 (493)
343 1pzg_A LDH, lactate dehydrogen 95.1 0.024 8.1E-07 52.0 5.5 36 5-40 7-43 (331)
344 3c85_A Putative glutathione-re 95.0 0.027 9.3E-07 46.6 5.2 34 7-40 39-73 (183)
345 3lk7_A UDP-N-acetylmuramoylala 95.0 0.023 7.8E-07 54.6 5.1 35 6-40 8-42 (451)
346 3kkj_A Amine oxidase, flavin-c 94.9 0.013 4.4E-07 51.7 3.0 33 175-207 4-36 (336)
347 2vvm_A Monoamine oxidase N; FA 94.9 0.051 1.7E-06 52.8 7.4 56 88-145 257-313 (495)
348 4e12_A Diketoreductase; oxidor 94.8 0.031 1E-06 50.0 5.2 34 7-40 4-37 (283)
349 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.033 1.1E-06 47.5 5.1 34 6-39 30-63 (223)
350 2x5o_A UDP-N-acetylmuramoylala 94.7 0.023 7.9E-07 54.4 4.2 35 7-41 5-39 (439)
351 3l4b_C TRKA K+ channel protien 94.6 0.029 9.9E-07 48.0 4.4 32 9-40 2-33 (218)
352 3i83_A 2-dehydropantoate 2-red 94.6 0.032 1.1E-06 50.9 4.9 33 8-40 3-35 (320)
353 4dio_A NAD(P) transhydrogenase 94.6 0.036 1.2E-06 51.7 5.2 35 7-41 190-224 (405)
354 3l6d_A Putative oxidoreductase 94.4 0.055 1.9E-06 48.9 6.1 40 1-40 1-42 (306)
355 2ewd_A Lactate dehydrogenase,; 94.4 0.039 1.3E-06 50.2 5.1 34 7-40 4-38 (317)
356 3vtf_A UDP-glucose 6-dehydroge 94.4 0.032 1.1E-06 52.8 4.5 36 5-40 19-54 (444)
357 3k96_A Glycerol-3-phosphate de 94.4 0.045 1.5E-06 50.6 5.4 35 6-40 28-62 (356)
358 3hn2_A 2-dehydropantoate 2-red 94.3 0.038 1.3E-06 50.2 4.6 33 8-40 3-35 (312)
359 4dgk_A Phytoene dehydrogenase; 94.3 0.016 5.5E-07 56.4 2.3 34 174-207 2-35 (501)
360 4ffl_A PYLC; amino acid, biosy 94.2 0.044 1.5E-06 50.9 5.0 35 7-41 1-35 (363)
361 2g1u_A Hypothetical protein TM 94.2 0.037 1.3E-06 44.4 3.9 42 165-206 11-52 (155)
362 3p2y_A Alanine dehydrogenase/p 94.2 0.038 1.3E-06 51.1 4.4 34 7-40 184-217 (381)
363 3eag_A UDP-N-acetylmuramate:L- 94.1 0.049 1.7E-06 49.8 5.0 35 6-40 3-38 (326)
364 2raf_A Putative dinucleotide-b 94.1 0.055 1.9E-06 45.9 5.0 35 7-41 19-53 (209)
365 3ghy_A Ketopantoate reductase 94.1 0.056 1.9E-06 49.6 5.3 32 8-39 4-35 (335)
366 3qha_A Putative oxidoreductase 94.1 0.044 1.5E-06 49.3 4.5 35 7-41 15-49 (296)
367 3doj_A AT3G25530, dehydrogenas 94.0 0.052 1.8E-06 49.2 5.0 37 5-41 19-55 (310)
368 3ktd_A Prephenate dehydrogenas 94.0 0.064 2.2E-06 49.2 5.6 40 1-40 2-41 (341)
369 3gg2_A Sugar dehydrogenase, UD 94.0 0.048 1.6E-06 52.2 4.9 33 8-40 3-35 (450)
370 1kyq_A Met8P, siroheme biosynt 94.0 0.036 1.2E-06 49.0 3.6 35 6-40 12-46 (274)
371 2ew2_A 2-dehydropantoate 2-red 94.0 0.048 1.6E-06 49.4 4.7 33 8-40 4-36 (316)
372 1t2d_A LDH-P, L-lactate dehydr 94.0 0.062 2.1E-06 48.9 5.3 35 6-40 3-38 (322)
373 3g17_A Similar to 2-dehydropan 93.9 0.049 1.7E-06 49.0 4.5 33 8-40 3-35 (294)
374 1b0a_A Protein (fold bifunctio 93.9 0.12 4E-06 45.6 6.7 37 170-206 156-193 (288)
375 1kyq_A Met8P, siroheme biosynt 93.8 0.044 1.5E-06 48.4 3.8 36 170-205 10-45 (274)
376 2c2x_A Methylenetetrahydrofola 93.8 0.11 3.7E-06 45.7 6.2 37 170-206 155-194 (281)
377 3tl2_A Malate dehydrogenase; c 93.8 0.071 2.4E-06 48.3 5.3 34 6-39 7-41 (315)
378 3g79_A NDP-N-acetyl-D-galactos 93.7 0.059 2E-06 51.8 4.9 36 6-41 17-54 (478)
379 2hjr_A Malate dehydrogenase; m 93.7 0.063 2.2E-06 49.0 4.9 33 8-40 15-48 (328)
380 3pqe_A L-LDH, L-lactate dehydr 93.7 0.065 2.2E-06 48.8 4.9 36 5-40 3-40 (326)
381 1ks9_A KPA reductase;, 2-dehyd 93.7 0.066 2.2E-06 47.8 5.0 32 9-40 2-33 (291)
382 4a26_A Putative C-1-tetrahydro 93.6 0.18 6.1E-06 44.8 7.4 37 170-206 162-199 (300)
383 3pid_A UDP-glucose 6-dehydroge 93.6 0.062 2.1E-06 50.8 4.7 35 6-41 35-69 (432)
384 1lld_A L-lactate dehydrogenase 93.6 0.065 2.2E-06 48.7 4.8 34 7-40 7-42 (319)
385 2a9f_A Putative malic enzyme ( 93.4 0.066 2.2E-06 49.5 4.5 35 6-40 187-222 (398)
386 2y0c_A BCEC, UDP-glucose dehyd 93.4 0.065 2.2E-06 51.7 4.7 34 7-40 8-41 (478)
387 3p2o_A Bifunctional protein fo 93.4 0.13 4.5E-06 45.3 6.1 37 170-206 157-194 (285)
388 2qyt_A 2-dehydropantoate 2-red 93.3 0.049 1.7E-06 49.4 3.6 34 5-38 6-45 (317)
389 3l07_A Bifunctional protein fo 93.3 0.14 4.7E-06 45.2 6.2 37 170-206 158-195 (285)
390 3k7m_X 6-hydroxy-L-nicotine ox 93.3 0.051 1.7E-06 51.7 3.8 74 282-356 219-306 (431)
391 1x13_A NAD(P) transhydrogenase 93.3 0.077 2.6E-06 49.9 4.8 34 7-40 172-205 (401)
392 3ihm_A Styrene monooxygenase A 93.3 0.04 1.4E-06 52.5 3.0 34 173-206 22-55 (430)
393 4a5o_A Bifunctional protein fo 93.2 0.17 5.7E-06 44.7 6.5 37 170-206 158-195 (286)
394 3pdu_A 3-hydroxyisobutyrate de 93.2 0.068 2.3E-06 47.8 4.2 33 8-40 2-34 (287)
395 2vns_A Metalloreductase steap3 93.2 0.1 3.4E-06 44.5 5.0 35 6-40 27-61 (215)
396 1bg6_A N-(1-D-carboxylethyl)-L 93.1 0.083 2.8E-06 48.8 4.9 34 7-40 4-37 (359)
397 1a4i_A Methylenetetrahydrofola 93.1 0.15 5.3E-06 45.2 6.2 37 170-206 162-199 (301)
398 3k6j_A Protein F01G10.3, confi 93.1 0.099 3.4E-06 49.8 5.3 35 6-40 53-87 (460)
399 1l7d_A Nicotinamide nucleotide 93.1 0.097 3.3E-06 49.0 5.2 34 7-40 172-205 (384)
400 1vl6_A Malate oxidoreductase; 93.1 0.08 2.7E-06 48.8 4.5 35 6-40 191-226 (388)
401 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.04 1.4E-06 43.6 2.1 34 7-40 21-54 (144)
402 3ego_A Probable 2-dehydropanto 93.0 0.089 3.1E-06 47.6 4.7 32 8-40 3-34 (307)
403 1zej_A HBD-9, 3-hydroxyacyl-CO 93.0 0.093 3.2E-06 46.9 4.7 34 6-40 11-44 (293)
404 3gpi_A NAD-dependent epimerase 93.0 0.12 4.2E-06 45.9 5.6 33 8-40 4-36 (286)
405 2h78_A Hibadh, 3-hydroxyisobut 92.9 0.081 2.8E-06 47.7 4.3 35 6-40 2-36 (302)
406 3d0o_A L-LDH 1, L-lactate dehy 92.9 0.095 3.3E-06 47.6 4.8 34 6-39 5-40 (317)
407 3oz2_A Digeranylgeranylglycero 92.9 0.05 1.7E-06 50.8 3.0 33 175-207 6-38 (397)
408 3qsg_A NAD-binding phosphogluc 92.9 0.078 2.7E-06 48.1 4.2 34 6-39 23-57 (312)
409 3mog_A Probable 3-hydroxybutyr 92.9 0.11 3.9E-06 50.0 5.4 35 6-40 4-38 (483)
410 3vps_A TUNA, NAD-dependent epi 92.9 0.12 4E-06 46.8 5.4 37 5-41 5-42 (321)
411 1ldn_A L-lactate dehydrogenase 92.9 0.11 3.7E-06 47.2 5.0 39 1-40 1-41 (316)
412 3ngx_A Bifunctional protein fo 92.8 0.2 6.7E-06 43.9 6.4 36 171-206 148-184 (276)
413 2q3e_A UDP-glucose 6-dehydroge 92.8 0.083 2.8E-06 50.9 4.4 35 6-40 4-40 (467)
414 4a7p_A UDP-glucose dehydrogena 92.7 0.1 3.4E-06 49.8 4.8 35 7-41 8-42 (446)
415 2uyy_A N-PAC protein; long-cha 92.7 0.14 4.8E-06 46.4 5.6 34 7-40 30-63 (316)
416 3g5s_A Methylenetetrahydrofola 92.7 0.079 2.7E-06 49.2 3.8 34 174-207 2-35 (443)
417 3l9w_A Glutathione-regulated p 92.7 0.12 4.1E-06 48.8 5.2 36 6-41 3-38 (413)
418 4dll_A 2-hydroxy-3-oxopropiona 92.6 0.11 3.8E-06 47.3 4.7 35 6-40 30-64 (320)
419 3dtt_A NADP oxidoreductase; st 92.6 0.12 4.1E-06 45.0 4.8 35 6-40 18-52 (245)
420 4e4t_A Phosphoribosylaminoimid 92.6 0.16 5.5E-06 48.1 6.0 37 5-41 33-69 (419)
421 1zcj_A Peroxisomal bifunctiona 92.5 0.12 4E-06 49.7 5.1 34 7-40 37-70 (463)
422 3pef_A 6-phosphogluconate dehy 92.5 0.1 3.5E-06 46.6 4.4 34 8-41 2-35 (287)
423 4huj_A Uncharacterized protein 92.5 0.074 2.5E-06 45.5 3.3 34 7-40 23-57 (220)
424 1jw9_B Molybdopterin biosynthe 92.5 0.11 3.6E-06 45.5 4.3 33 8-40 32-65 (249)
425 3nrn_A Uncharacterized protein 92.4 0.069 2.4E-06 50.6 3.3 33 174-206 1-33 (421)
426 3orq_A N5-carboxyaminoimidazol 92.4 0.17 5.8E-06 47.2 5.9 36 6-41 11-46 (377)
427 1pjc_A Protein (L-alanine dehy 92.4 0.13 4.4E-06 47.7 4.9 34 7-40 167-200 (361)
428 3c24_A Putative oxidoreductase 92.4 0.15 5.1E-06 45.5 5.3 34 7-40 11-45 (286)
429 2v6b_A L-LDH, L-lactate dehydr 92.3 0.12 4.2E-06 46.5 4.7 32 9-40 2-35 (304)
430 1mv8_A GMD, GDP-mannose 6-dehy 92.3 0.1 3.4E-06 49.9 4.2 32 9-40 2-33 (436)
431 1ur5_A Malate dehydrogenase; o 92.3 0.14 4.9E-06 46.2 5.0 33 8-40 3-36 (309)
432 3cky_A 2-hydroxymethyl glutara 92.3 0.11 3.9E-06 46.6 4.4 35 6-40 3-37 (301)
433 3d1l_A Putative NADP oxidoredu 92.2 0.12 3.9E-06 45.7 4.3 34 7-40 10-44 (266)
434 1z82_A Glycerol-3-phosphate de 92.1 0.14 4.6E-06 47.0 4.8 34 7-40 14-47 (335)
435 3dhn_A NAD-dependent epimerase 92.1 0.11 3.9E-06 44.3 4.0 35 6-40 3-38 (227)
436 4e21_A 6-phosphogluconate dehy 92.0 0.15 5E-06 47.2 4.9 34 7-40 22-55 (358)
437 3hwr_A 2-dehydropantoate 2-red 92.0 0.14 4.7E-06 46.6 4.7 33 7-40 19-51 (318)
438 3gvi_A Malate dehydrogenase; N 92.0 0.17 5.8E-06 46.0 5.1 34 7-40 7-41 (324)
439 2oln_A NIKD protein; flavoprot 92.0 0.092 3.1E-06 49.3 3.5 33 175-207 6-38 (397)
440 3ka7_A Oxidoreductase; structu 91.9 0.081 2.8E-06 50.1 3.1 33 174-206 1-33 (425)
441 2o3j_A UDP-glucose 6-dehydroge 91.9 0.13 4.6E-06 49.6 4.6 34 7-40 9-44 (481)
442 1ryi_A Glycine oxidase; flavop 91.9 0.08 2.7E-06 49.3 2.9 33 174-206 18-50 (382)
443 2pv7_A T-protein [includes: ch 91.8 0.22 7.7E-06 44.7 5.7 34 7-40 21-55 (298)
444 2eez_A Alanine dehydrogenase; 91.7 0.17 5.8E-06 47.0 4.9 34 7-40 166-199 (369)
445 3dme_A Conserved exported prot 91.7 0.094 3.2E-06 48.4 3.2 33 174-206 5-37 (369)
446 2yg5_A Putrescine oxidase; oxi 91.7 0.24 8.2E-06 47.3 6.2 52 91-145 217-269 (453)
447 2g5c_A Prephenate dehydrogenas 91.6 0.18 6.2E-06 44.8 4.9 33 8-40 2-36 (281)
448 1hyh_A L-hicdh, L-2-hydroxyiso 91.6 0.15 5.2E-06 46.1 4.4 33 8-40 2-36 (309)
449 3p7m_A Malate dehydrogenase; p 91.6 0.21 7.2E-06 45.3 5.3 34 7-40 5-39 (321)
450 2cvz_A Dehydrogenase, 3-hydrox 91.6 0.15 5.3E-06 45.4 4.4 32 8-40 2-33 (289)
451 3ius_A Uncharacterized conserv 91.6 0.16 5.3E-06 45.2 4.4 34 7-40 5-38 (286)
452 4g65_A TRK system potassium up 91.6 0.083 2.8E-06 50.7 2.7 34 7-40 3-36 (461)
453 2vhw_A Alanine dehydrogenase; 91.6 0.18 6.2E-06 47.0 4.9 34 7-40 168-201 (377)
454 4ezb_A Uncharacterized conserv 91.5 0.15 5.2E-06 46.3 4.3 33 8-40 25-58 (317)
455 3c4a_A Probable tryptophan hyd 91.5 0.091 3.1E-06 49.1 2.9 34 174-207 1-36 (381)
456 2r6j_A Eugenol synthase 1; phe 91.5 0.21 7.2E-06 45.2 5.3 34 7-40 11-45 (318)
457 3phh_A Shikimate dehydrogenase 91.5 0.22 7.4E-06 43.8 5.1 34 7-40 118-151 (269)
458 2uzz_A N-methyl-L-tryptophan o 91.4 0.079 2.7E-06 49.2 2.4 32 175-206 4-35 (372)
459 1id1_A Putative potassium chan 91.4 0.16 5.3E-06 40.5 3.9 34 173-206 3-36 (153)
460 2i6t_A Ubiquitin-conjugating e 91.4 0.17 5.8E-06 45.5 4.5 35 6-40 13-49 (303)
461 1yj8_A Glycerol-3-phosphate de 91.4 0.15 5.2E-06 47.5 4.3 34 8-41 22-62 (375)
462 4gwg_A 6-phosphogluconate dehy 91.4 0.22 7.4E-06 47.9 5.4 36 6-41 3-38 (484)
463 2iid_A L-amino-acid oxidase; f 91.4 0.095 3.3E-06 50.9 3.0 34 173-206 33-66 (498)
464 2gf3_A MSOX, monomeric sarcosi 91.4 0.1 3.5E-06 48.7 3.2 32 175-206 5-36 (389)
465 1c0p_A D-amino acid oxidase; a 91.4 0.12 4.1E-06 47.8 3.5 33 174-206 7-39 (363)
466 1guz_A Malate dehydrogenase; o 91.3 0.19 6.6E-06 45.4 4.8 32 9-40 2-35 (310)
467 1dlj_A UDP-glucose dehydrogena 91.3 0.14 4.9E-06 48.1 4.1 31 9-40 2-32 (402)
468 1txg_A Glycerol-3-phosphate de 91.3 0.16 5.4E-06 46.4 4.3 30 9-38 2-31 (335)
469 3ggo_A Prephenate dehydrogenas 91.3 0.25 8.4E-06 44.8 5.4 33 8-40 34-68 (314)
470 2aef_A Calcium-gated potassium 91.2 0.09 3.1E-06 45.4 2.3 34 6-40 8-41 (234)
471 3dfu_A Uncharacterized protein 91.2 0.067 2.3E-06 45.9 1.5 35 5-39 4-38 (232)
472 1jay_A Coenzyme F420H2:NADP+ o 91.2 0.2 6.7E-06 42.4 4.4 32 9-40 2-34 (212)
473 2jae_A L-amino acid oxidase; o 91.2 0.45 1.5E-05 46.0 7.5 53 90-143 240-295 (489)
474 3c96_A Flavin-containing monoo 91.1 0.13 4.4E-06 48.5 3.6 34 174-207 5-39 (410)
475 1pjq_A CYSG, siroheme synthase 91.1 0.22 7.5E-06 47.7 5.1 34 6-39 11-44 (457)
476 3cgv_A Geranylgeranyl reductas 91.1 0.12 4E-06 48.4 3.2 32 175-206 6-37 (397)
477 2b9w_A Putative aminooxidase; 91.0 0.36 1.2E-05 45.6 6.6 53 88-143 205-257 (424)
478 1nyt_A Shikimate 5-dehydrogena 91.0 0.23 7.9E-06 43.9 4.9 34 7-40 119-152 (271)
479 4gbj_A 6-phosphogluconate dehy 91.0 0.15 5.1E-06 45.8 3.6 34 8-41 6-39 (297)
480 3vku_A L-LDH, L-lactate dehydr 91.0 0.22 7.6E-06 45.2 4.8 36 5-40 7-44 (326)
481 1y56_B Sarcosine oxidase; dehy 90.9 0.11 3.7E-06 48.4 2.8 33 174-206 6-38 (382)
482 2e1m_A L-glutamate oxidase; L- 90.9 0.13 4.6E-06 47.7 3.3 34 172-205 43-76 (376)
483 4gde_A UDP-galactopyranose mut 90.9 0.12 4.2E-06 50.2 3.2 32 175-206 12-44 (513)
484 2egg_A AROE, shikimate 5-dehyd 90.9 0.23 7.8E-06 44.6 4.7 34 7-40 141-175 (297)
485 1vpd_A Tartronate semialdehyde 90.8 0.19 6.4E-06 45.1 4.2 33 8-40 6-38 (299)
486 3k5i_A Phosphoribosyl-aminoimi 90.8 0.23 7.8E-06 46.8 4.9 34 6-40 23-56 (403)
487 1a5z_A L-lactate dehydrogenase 90.8 0.2 6.7E-06 45.6 4.3 32 9-40 2-35 (319)
488 2p4q_A 6-phosphogluconate dehy 90.7 0.27 9.4E-06 47.5 5.5 33 8-40 11-43 (497)
489 3gt0_A Pyrroline-5-carboxylate 90.7 0.29 9.9E-06 42.5 5.2 33 8-40 3-39 (247)
490 3d3w_A L-xylulose reductase; u 90.7 0.34 1.2E-05 41.8 5.7 40 1-40 1-41 (244)
491 1b37_A Protein (polyamine oxid 90.7 0.51 1.8E-05 45.3 7.4 40 104-143 230-269 (472)
492 3rui_A Ubiquitin-like modifier 90.7 0.25 8.7E-06 44.9 4.8 34 7-40 34-68 (340)
493 3nyc_A D-arginine dehydrogenas 90.6 0.12 4.3E-06 47.9 2.9 33 173-206 9-41 (381)
494 2gf2_A Hibadh, 3-hydroxyisobut 90.6 0.24 8.3E-06 44.3 4.7 32 9-40 2-33 (296)
495 3h8v_A Ubiquitin-like modifier 90.6 0.2 6.7E-06 44.7 4.0 34 7-40 36-70 (292)
496 2rir_A Dipicolinate synthase, 90.6 0.26 8.9E-06 44.3 4.9 35 6-40 156-190 (300)
497 3d4o_A Dipicolinate synthase s 90.6 0.26 8.9E-06 44.1 4.8 35 6-40 154-188 (293)
498 2f1k_A Prephenate dehydrogenas 90.5 0.25 8.6E-06 43.8 4.7 32 9-40 2-33 (279)
499 2gag_B Heterotetrameric sarcos 90.5 0.13 4.4E-06 48.3 2.9 33 174-206 22-56 (405)
500 1d5t_A Guanine nucleotide diss 90.5 0.39 1.3E-05 45.7 6.3 56 86-143 234-289 (433)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=2.1e-53 Score=415.94 Aligned_cols=351 Identities=23% Similarity=0.369 Sum_probs=288.8
Q ss_pred CcEEEECCChHHHHHHHHHHh---cCCC---eEEEccCCCCCCcccCCCC----------CCccccceEeecCCCcccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSE---GNIN---YDLYEMESDLGGVWNSQAS----------CGRVYPSLHLISPKFNTQVP 71 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~---~g~~---v~v~e~~~~~Gg~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 71 (433)
+||+|||||++|+++|..|++ .|++ |+|||+.+.+||+|.+... .+.+|+.+..+.++..+.|+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 9999999999999997532 24578888888888888888
Q ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC--eEEEEEcc---C--cEEEeCEEEEcc
Q psy2398 72 DYPMPDN----YPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED--IWEVELSN---G--KKKKYDFIAVCN 140 (433)
Q Consensus 72 ~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~--~~~v~~~~---g--~~~~~d~vIvAt 140 (433)
+++++.. .+.++++.++.+|++++++++++..+++++++|+.|+.+++ .|.|++.+ | .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 8776532 25688899999999999999998666999999999998754 89999865 3 468999999999
Q ss_pred CCCCCCCCCCCCC--CCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCC
Q psy2398 141 GAQRVARYPNYSG--YFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKP 218 (433)
Q Consensus 141 G~~s~p~~p~i~g--~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~ 218 (433)
|+++.|+.|+++| .|.+.++|+..++++..+.+|+|+|||+|.||+|+|.+|++.+++|+++.|++... +.
T Consensus 163 G~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~-~~------ 235 (464)
T 2xve_A 163 GHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM-GY------ 235 (464)
T ss_dssp CSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC-CC------
T ss_pred CCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC-CC------
Confidence 9988999999999 67888999999998888899999999999999999999999999999999876310 10
Q ss_pred hhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEE
Q psy2398 219 TPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVH 298 (433)
Q Consensus 219 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~ 298 (433)
.+ ..+|.+.+.|+++++.+|+
T Consensus 236 ----------~~-------------------------------------------------~~~V~~~~~V~~i~~~~V~ 256 (464)
T 2xve_A 236 ----------KW-------------------------------------------------PENWDERPNLVRVDTENAY 256 (464)
T ss_dssp ----------CC-------------------------------------------------CTTEEECSCEEEECSSEEE
T ss_pred ----------CC-------------------------------------------------CCceEEcCCeEEEeCCEEE
Confidence 00 0156666788899888999
Q ss_pred ecCCceeeccEEEEccCCCCCCCCCCcc-cccccCC-cc-ccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHH
Q psy2398 299 FVDDTHIEVDTIIYATGYNRHFPFIDKE-KLEWKLG-IP-DLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSY 375 (433)
Q Consensus 299 ~~dG~~~~~D~vi~atG~~~~~~~l~~~-~~~~~~~-~~-~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~ 375 (433)
+.||+++++|.||+||||+|+++||+.+ .+..+++ .+ .+|+++++++.|+|||+||+.. +..++.++.||+++|++
T Consensus 257 ~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~-~~~~~~a~~qa~~~a~~ 335 (464)
T 2xve_A 257 FADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQ-WYSFNMFDAQAWYARDV 335 (464)
T ss_dssp ETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCC-SSCHHHHHHHHHHHHHH
T ss_pred ECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcccccccceEecCCCCCEEEEeCccc-ccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999853 4444444 44 7888888999999999999876 46789999999999999
Q ss_pred HhhhhcCCCcchhHHHHhhcCCCccC-CCccccCCCceeeeeHHHHHHHHHHhhccc
Q psy2398 376 IQAFIRKSKGYLKFLNAKKNDNPDLG-QDYFIDSHRHLWEVDFWKFIKCARMYRDML 431 (433)
Q Consensus 376 i~g~~~lp~~~~~~~~m~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 431 (433)
|.|+.+||+. ++|.+++++... ...|....++.. . .+.|+|+|++++|+.
T Consensus 336 l~G~~~lP~~----~~m~~~~~~~~~~~~~~~~~~~~~~-~-~~~Y~~~l~~~~g~~ 386 (464)
T 2xve_A 336 IMGRLPLPSK----EEMKADSMAWREKELTLVTAEEMYT-Y-QGDYIQNLIDMTDYP 386 (464)
T ss_dssp HTTSSCCCCH----HHHHHHHHHHHHHHHTCCSHHHHHH-H-HHHHHHHHHTTSSSC
T ss_pred HcCCCCCcCH----HHHHHHHHHHHHHhhccCCCCCccc-c-HHHHHHHHHHHcCCC
Confidence 9999999997 899877532111 112321122210 0 368999999999985
No 2
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=3.1e-51 Score=400.10 Aligned_cols=347 Identities=22% Similarity=0.339 Sum_probs=286.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCCCCCCcccCCCC----------------------------CCc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMESDLGGVWNSQAS----------------------------CGR 54 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~~~Gg~~~~~~~----------------------------~~~ 54 (433)
...+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.+... .+.
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 346899999999999999999999999 99999999999999988642 134
Q ss_pred cccceEeecCCCcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc---Cc--
Q psy2398 55 VYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN---GK-- 129 (433)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g~-- 129 (433)
+|..+..+.++.++.|++++++...+.++.+.++.+|+.+++++++. .++++++|+.++.+++.|.|++.+ |.
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~ 161 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKKDGSWVVTYKGTKAGSPI 161 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEETTEEEEEEEESSTTCCE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeCCCeEEEEEeecCCCCee
Confidence 55666666666677788888887777889999999999999998754 689999999999888899999876 65
Q ss_pred -EEEeCEEEEccCCCCCCCCCCCCC--C----CCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCc-EEE
Q psy2398 130 -KKKYDFIAVCNGAQRVARYPNYSG--Y----FSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEK-VYH 201 (433)
Q Consensus 130 -~~~~d~vIvAtG~~s~p~~p~i~g--~----~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~-V~~ 201 (433)
++.||+||+|||+++.|++|+++| . +.+.++|+..++++..+.+++|+|||+|.||+|+|.+|++.+++ |++
T Consensus 162 ~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l 241 (447)
T 2gv8_A 162 SKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQ 241 (447)
T ss_dssp EEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEE
T ss_pred EEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEE
Confidence 789999999999999999999999 3 36789999999998888999999999999999999999999999 999
Q ss_pred EEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCC
Q psy2398 202 STRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHG 281 (433)
Q Consensus 202 ~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (433)
+.|++.+ +...
T Consensus 242 ~~r~~~~---------------------------------------------------------------------l~~~ 252 (447)
T 2gv8_A 242 SLLGGGD---------------------------------------------------------------------IQNE 252 (447)
T ss_dssp ECTTCCS---------------------------------------------------------------------CBCS
T ss_pred EeCCCCc---------------------------------------------------------------------CCCC
Confidence 9987631 0112
Q ss_pred CeeecCCceee--eCCeEEecCCce-eeccEEEEccCCCCCCCC-----CCcc--cccccCC-ccccccccccCCCCcEE
Q psy2398 282 DILPKDDIKNL--NGNIVHFVDDTH-IEVDTIIYATGYNRHFPF-----IDKE--KLEWKLG-IPDLFIHIAPRNLDNIF 350 (433)
Q Consensus 282 ~v~~~~~v~~~--~~~~v~~~dG~~-~~~D~vi~atG~~~~~~~-----l~~~--~~~~~~~-~~~~~~~~~~~~~p~i~ 350 (433)
+|...+.|+++ ++.+|++.||++ +++|.||+||||+|+++| |+.. .+..++. ...+|.+++.+++|+||
T Consensus 253 ~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~ 332 (447)
T 2gv8_A 253 SLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLA 332 (447)
T ss_dssp SEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEE
T ss_pred CeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEE
Confidence 56666778888 456899999987 799999999999999999 8742 2222222 24678888889999999
Q ss_pred EEccccccCChhhHHHHHHHHHHHHHhhhhcCCCcchhHHHHhhcCCCc----cCCCccccCCCceee-eeHHHHHHHHH
Q psy2398 351 FFGFVNAAAGLGDGLRLQGQFIRSYIQAFIRKSKGYLKFLNAKKNDNPD----LGQDYFIDSHRHLWE-VDFWKFIKCAR 425 (433)
Q Consensus 351 ~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~~lp~~~~~~~~m~~~~~~~----~~~~~~~~~~~~~~~-~~~~~y~~~~~ 425 (433)
|+||+... ..++.++.||+++|++|.|+.+||+. ++|++|.+++ ...++ ..|... .++..|+++|+
T Consensus 333 ~~G~~~~~-~~~~~a~~qa~~~a~~~~g~~~lp~~----~~m~~~~~~~~~~~~~~~~----~~~~~~~~~~~~y~~~l~ 403 (447)
T 2gv8_A 333 FVGLALHV-VPFPTSQAQAAFLARVWSGRLKLPSK----EEQLKWQDELMFSLSGANN----MYHSLDYPKDATYINKLH 403 (447)
T ss_dssp ESSCCBSS-CHHHHHHHHHHHHHHHHTTSSCCCCH----HHHHHHHHHHHHHHTTCGG----GTTBCTTTHHHHHHHHHH
T ss_pred EEeccccc-cCchHHHHHHHHHHHHHcCCCCCcCH----HHHHHHHHHHHHHhcCCCc----ceeecCCccHHHHHHHHH
Confidence 99999875 47899999999999999999999998 9999996432 12211 114433 46789999999
Q ss_pred Hhhccc
Q psy2398 426 MYRDML 431 (433)
Q Consensus 426 ~~~~~~ 431 (433)
+++|..
T Consensus 404 ~~~~~~ 409 (447)
T 2gv8_A 404 DWCKQA 409 (447)
T ss_dssp HHHHTC
T ss_pred HHhCcc
Confidence 999864
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=8.7e-46 Score=367.10 Aligned_cols=367 Identities=20% Similarity=0.276 Sum_probs=291.7
Q ss_pred CCcEEEECCChHHHHHHHHHH-hcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCC----CCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELS-EGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYP----MPDNYPV 81 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~-~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 81 (433)
++||+|||||++|+++|..|+ +.|++|+|||+.+.+||+|..+ .|++..++.+...+.++..+ .+.+...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~-----~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~ 82 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN-----RYPGALSDTESHLYRFSFDRDLLQESTWKTT 82 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC-----CCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc-----CCCCceecCCcceeeeccccccccCCCCccc
Confidence 479999999999999999999 8999999999999999999876 48888888777766665321 1233345
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC--CeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE--DIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSG 157 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~--~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g 157 (433)
++.+.++.+|+...++++++..+++++++|+.++.++ +.|+|++.+|+++.||+||+|||.++.|+.|+++| .|.+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g 162 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEG 162 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCC
Confidence 6788999999999999999977899999999999884 48999999998899999999999988999999999 6899
Q ss_pred ceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhH--HhH-hhchhhc---
Q psy2398 158 EILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQ--WML-QLGNKFS--- 231 (433)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~--~~~-~~p~~~~--- 231 (433)
..+|+..+.....+.+|+|+|||+|.||+|+|.+|++.+.+|+++.|++.|++|......+... .+. .+|....
T Consensus 163 ~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 242 (540)
T 3gwf_A 163 ETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAK 242 (540)
T ss_dssp EEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHH
T ss_pred CEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHH
Confidence 9999999888778899999999999999999999999999999999999999998754332211 111 1111100
Q ss_pred ------------------CchHH----------------------------------HHHHHHHHHHhcCCCCcCCCCCC
Q psy2398 232 ------------------SKEET----------------------------------MAYIKQVFKLAGFDGVDYGLKKP 259 (433)
Q Consensus 232 ------------------~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 259 (433)
.+++. ..+.....+....++.....+.|
T Consensus 243 ~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P 322 (540)
T 3gwf_A 243 NSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMP 322 (540)
T ss_dssp TSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCC
T ss_pred hccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCC
Confidence 00000 01111111122233333344567
Q ss_pred CCCCCCCCCccChhhhhcccCCCeeec----CCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCCCc------cccc
Q psy2398 260 DHPLDAAHPIMNSQILYHIGHGDILPK----DDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFIDK------EKLE 329 (433)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~------~~~~ 329 (433)
+ .+++.++.+++++.+.+..++|++. ..|+++++++|.++||+++++|+||+||||+++..++.. ++..
T Consensus 323 ~-~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~ 401 (540)
T 3gwf_A 323 K-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLH 401 (540)
T ss_dssp C-SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCB
T ss_pred C-CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcC
Confidence 7 8899999999999999999999975 689999999999999999999999999999998644432 2221
Q ss_pred c---cCCccccccccccCCCCcEEEE-ccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 330 W---KLGIPDLFIHIAPRNLDNIFFF-GFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 330 ~---~~~~~~~~~~~~~~~~p~i~~i-G~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
. -.+.+..|.++..+++||+|++ |...+.++.+.++|.|++|+++.|...
T Consensus 402 l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~~ 455 (540)
T 3gwf_A 402 INDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGYA 455 (540)
T ss_dssp HHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 1 1256789999999999999999 766555677889999999999999644
No 4
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.3e-44 Score=359.27 Aligned_cols=368 Identities=19% Similarity=0.265 Sum_probs=287.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCC----CCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYP----MPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 81 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+ .|++..++.+...+.++..+ .+.+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~-----~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~ 94 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWN-----RYPGARCDVESIDYSYSFSPELEQEWNWSEK 94 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----CCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-----CCCCceeCCCchhcccccccccccCCCCccC
Confidence 34799999999999999999999999999999999999999866 48888888887777665331 1244456
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC--CeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE--DIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSG 157 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~--~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g 157 (433)
++.+.++.+|++..++++++..+++++++|+.++.++ +.|+|++.+|+++.||+||+|||.++.|+.|+++| .|.+
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g 174 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTG 174 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCC
Confidence 7889999999999999999877899999999999874 48999999998899999999999888999999999 6889
Q ss_pred ceeccCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhH--HhH-hhchhhcC-
Q psy2398 158 EILHSMDYK-SPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQ--WML-QLGNKFSS- 232 (433)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~--~~~-~~p~~~~~- 232 (433)
..+|+..+. +..++.+|+|+|||+|.||+|+|..|++.+++|+++.|++.|++|+.....+... .+. .+|.....
T Consensus 175 ~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~ 254 (549)
T 4ap3_A 175 DIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLS 254 (549)
T ss_dssp EEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHH
T ss_pred ceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHH
Confidence 999999888 5677889999999999999999999999999999999999999998654332211 111 11111100
Q ss_pred --------------------chHHHH--------------------------------HHHHHHHHhcCCCCcCCCCCCC
Q psy2398 233 --------------------KEETMA--------------------------------YIKQVFKLAGFDGVDYGLKKPD 260 (433)
Q Consensus 233 --------------------~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~ 260 (433)
+++... +.....+....+..-.....|.
T Consensus 255 r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~ 334 (549)
T 4ap3_A 255 RESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPK 334 (549)
T ss_dssp HHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCS
T ss_pred HhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC
Confidence 000101 1111111111222222334576
Q ss_pred -CCCCCCCCccChhhhhcccCCCeeec----CCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCCCcc------ccc
Q psy2398 261 -HPLDAAHPIMNSQILYHIGHGDILPK----DDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFIDKE------KLE 329 (433)
Q Consensus 261 -~~~~~~~~~~~~~~~~~~~~~~v~~~----~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~------~~~ 329 (433)
+...+.++.+++++.+.+..++|++. ..|+++++++|.++|| ++++|+||+||||+++..++... +..
T Consensus 335 ~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~ 413 (549)
T 4ap3_A 335 DHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEIVGRGGRT 413 (549)
T ss_dssp SCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESSTTGGGSEEECGGGCB
T ss_pred CCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccccccCceeEECCCCcC
Confidence 88899999999999999999999975 6899999999999999 99999999999999987555422 111
Q ss_pred c---cCCccccccccccCCCCcEEEEccccc---cCChhhHHHHHHHHHHHHHhhh
Q psy2398 330 W---KLGIPDLFIHIAPRNLDNIFFFGFVNA---AAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 330 ~---~~~~~~~~~~~~~~~~p~i~~iG~~~~---~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
. -.+.+..|.++..+++||+|++.-..+ .++...++|.|++|+++.|...
T Consensus 414 l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~ 469 (549)
T 4ap3_A 414 LKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYL 469 (549)
T ss_dssp HHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHH
Confidence 1 124678999999999999999855442 3467788999999999999644
No 5
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=2.1e-44 Score=357.49 Aligned_cols=368 Identities=22% Similarity=0.306 Sum_probs=284.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCC----CCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPM----PDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 81 (433)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+ +|++..+..+...+.++..+. ..+...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~-----~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~ 82 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN-----RYPGCRLDTESYAYGYFALKGIIPEWEWSEN 82 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----CCTTCBCSSCHHHHCHHHHTTSSTTCCCSBS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-----CCCceeecCchhhcccccCcccccCCCcccc
Confidence 45799999999999999999999999999999999999999876 588888777766665542221 234446
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe--CCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY--EDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSG 157 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~--~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g 157 (433)
++.+.++.+|++..++++++..+++++++|+.++.+ ++.|.|++.+|+++.||+||+|||.++.|+.|+++| .|.+
T Consensus 83 ~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g 162 (545)
T 3uox_A 83 FASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKG 162 (545)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCC
Confidence 788999999999999999997789999999999987 468999999998899999999999888999999999 7889
Q ss_pred ceeccCCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhH--HhH-hhc
Q psy2398 158 EILHSMDYKSP-------DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQ--WML-QLG 227 (433)
Q Consensus 158 ~~~~~~~~~~~-------~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~--~~~-~~p 227 (433)
..+|+..+... .++.+|+|+|||+|.||+|+|.+|++.+++||++.|++.|++|+.....+... .+. .+|
T Consensus 163 ~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p 242 (545)
T 3uox_A 163 ESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYP 242 (545)
T ss_dssp EEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHH
T ss_pred CeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhH
Confidence 99999888765 66789999999999999999999999999999999999999998654332211 111 122
Q ss_pred hhhc---------------------CchHHHH---------------------------------HHHHHHHHhcCCCCc
Q psy2398 228 NKFS---------------------SKEETMA---------------------------------YIKQVFKLAGFDGVD 253 (433)
Q Consensus 228 ~~~~---------------------~~~~~~~---------------------------------~~~~~~~~~~~~~~~ 253 (433)
..+. .++++.. ......+....++.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~ 322 (545)
T 3uox_A 243 TILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVV 322 (545)
T ss_dssp HHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHH
T ss_pred HHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1110 0011111 111111111122222
Q ss_pred CCCCCC-CCCCCCCCCccChhhhhcccCCCeeec----CCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCCCcc--
Q psy2398 254 YGLKKP-DHPLDAAHPIMNSQILYHIGHGDILPK----DDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFIDKE-- 326 (433)
Q Consensus 254 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~-- 326 (433)
.....| .+...+.++.+++++.+.+..++|++. ..|+++++++|.++|| ++++|+||+||||+++..++...
T Consensus 323 ~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i 401 (545)
T 3uox_A 323 AEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDI 401 (545)
T ss_dssp HHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSSCSCTTSEE
T ss_pred HHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCccccccccCCCceE
Confidence 234467 688899999999999999999999975 6899999999999999 99999999999999876554322
Q ss_pred ----cccc---cCCccccccccccCCCCcEEEEccccc---cCChhhHHHHHHHHHHHHHhhh
Q psy2398 327 ----KLEW---KLGIPDLFIHIAPRNLDNIFFFGFVNA---AAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 327 ----~~~~---~~~~~~~~~~~~~~~~p~i~~iG~~~~---~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+... -...+..|.++..+++||+|++.-..+ .++...++|.|++++++.|...
T Consensus 402 ~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~ 464 (545)
T 3uox_A 402 RGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYM 464 (545)
T ss_dssp ECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHH
Confidence 2111 124678899999999999999865553 2466788999999999999643
No 6
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=8.2e-44 Score=337.94 Aligned_cols=344 Identities=21% Similarity=0.349 Sum_probs=275.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.+. |+.+.+..+.....++.++.+.....++.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA------WHSLHLFSPAGWSSIPGWPMPASQGPYPARA 76 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS------CTTCBCSSCGGGSCCSSSCCCCCSSSSCBHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC------CCCcEecCchhhhhCCCCCCCCCccCCCCHH
Confidence 4799999999999999999999999999999999999999986 7888888888888888888887777888999
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSM 163 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~ 163 (433)
++.+|+.++++++++ .++++++|+.++.+++.|. |++.++ ++.||+||+|||.++.|.+|+++| .+.+..+|+.
T Consensus 77 ~~~~~l~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~ 153 (357)
T 4a9w_A 77 EVLAYLAQYEQKYAL--PVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSA 153 (357)
T ss_dssp HHHHHHHHHHHHTTC--CEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGG
T ss_pred HHHHHHHHHHHHcCC--EEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEec
Confidence 999999999999998 4899999999999989999 998887 799999999999988999999999 7788899999
Q ss_pred CCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHH
Q psy2398 164 DYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQV 243 (433)
Q Consensus 164 ~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 243 (433)
.+.....+.+++|+|||+|.+|+|+|..|++.+ +|+++.|++..++|....+.... .++.. .+.+
T Consensus 154 ~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~-- 218 (357)
T 4a9w_A 154 HYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLF-------ERATE-----RWKA-- 218 (357)
T ss_dssp GCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHH-------TC--------------
T ss_pred cCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHH-------HHHHH-----HHhc--
Confidence 999888889999999999999999999999998 59999998655656543221100 11111 0000
Q ss_pred HHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCC
Q psy2398 244 FKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFI 323 (433)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l 323 (433)
.. ...+ .+........+.+++.+...+..+.+.....+++++..++.+.||+++++|.||+|||++|+++++
T Consensus 219 --~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l 290 (357)
T 4a9w_A 219 --QQ-----EGRE-PDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHL 290 (357)
T ss_dssp -----------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCCBCCCCGGG
T ss_pred --cc-----cccC-CCcccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCCcCCCCccc
Confidence 00 0000 001111123345667777788888888888999999999999999999999999999999999999
Q ss_pred CcccccccCCccccccc-cccCCCCcEEEEc--cccc-cCChhhHHHHHHHHHHHHHhhhhcC
Q psy2398 324 DKEKLEWKLGIPDLFIH-IAPRNLDNIFFFG--FVNA-AAGLGDGLRLQGQFIRSYIQAFIRK 382 (433)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-~~~~~~p~i~~iG--~~~~-~~~~~~~a~~qa~~~a~~i~g~~~l 382 (433)
+...+..+.+++.+++. ++.++.|+||++| |+.. .+..+..|..||+.+|.+|...++-
T Consensus 291 ~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 291 KGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CcccccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 87666655567777776 5789999999999 5554 3455667899999999998776543
No 7
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1.2e-43 Score=353.75 Aligned_cols=369 Identities=18% Similarity=0.292 Sum_probs=283.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCC----CCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPM----PDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 81 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+ +|++..+..+...+.++..+. ..+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~-----~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~ 89 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWN-----RYPGARCDIESIEYCYSFSEEVLQEWNWTER 89 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----CCTTCBCSSCTTTSSCCSCHHHHHHCCCCBS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccc-----CCCceeecccccccccccChhhhhccCcccc
Confidence 35799999999999999999999999999999999999999866 577777777666665542221 123335
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC--CeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE--DIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSG 157 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~--~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g 157 (433)
++.+.++.+|++.+++++++..+++++++|++++.++ +.|+|++.+|+++.||+||+|||.++.|+.|+++| .|.|
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G 169 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAG 169 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCS
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCC
Confidence 7789999999999999998777899999999999873 58999999988899999999999999999999999 6889
Q ss_pred ceeccCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHH--hHh-hchh----
Q psy2398 158 EILHSMDYK-SPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQW--MLQ-LGNK---- 229 (433)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~--~~~-~p~~---- 229 (433)
..+|+..+. +..++.+|+|+|||+|.||+|+|..+++.+.+|+++.|++.|++|+.......... +.. +|..
T Consensus 170 ~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~ 249 (542)
T 1w4x_A 170 NLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREES 249 (542)
T ss_dssp EEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHH
T ss_pred ceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHH
Confidence 999998887 44567899999999999999999999999999999999999888875432221110 000 1110
Q ss_pred ----------------hcC-chH--------------------------------HHHHHHHHHHHhcCCCCcCCCCCC-
Q psy2398 230 ----------------FSS-KEE--------------------------------TMAYIKQVFKLAGFDGVDYGLKKP- 259 (433)
Q Consensus 230 ----------------~~~-~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~- 259 (433)
+.. +++ ...+.....+....+........|
T Consensus 250 ~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~ 329 (542)
T 1w4x_A 250 RNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPK 329 (542)
T ss_dssp HTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCC
T ss_pred HhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCC
Confidence 000 000 001111111111223322333456
Q ss_pred CCCCCCCCCccChhhhhcccCCCeee----cCCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCCCccc------cc
Q psy2398 260 DHPLDAAHPIMNSQILYHIGHGDILP----KDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFIDKEK------LE 329 (433)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~----~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~~------~~ 329 (433)
++.+++.++.+++++.+.+..++|++ ...|+++++++|.++| +++++|+||+||||+++..++.... ..
T Consensus 330 ~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~ 408 (542)
T 1w4x_A 330 GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFKIDIRGVGNVA 408 (542)
T ss_dssp SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCB
T ss_pred CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccccCcCceeeECCCCCC
Confidence 68889999999999999999999996 4689999999999999 8999999999999999766543221 11
Q ss_pred c---cCCccccccccccCCCCcEEEE-ccccc--cCChhhHHHHHHHHHHHHHhhhh
Q psy2398 330 W---KLGIPDLFIHIAPRNLDNIFFF-GFVNA--AAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 330 ~---~~~~~~~~~~~~~~~~p~i~~i-G~~~~--~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
. -.+.+..|..+..+++||+|++ |+.++ .++....+|.|+++++++|....
T Consensus 409 l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 409 LKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp HHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 1 1245677888889999999998 98854 34566899999999999997654
No 8
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.3e-38 Score=298.93 Aligned_cols=316 Identities=19% Similarity=0.215 Sum_probs=223.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCCCCCCcccCCCCCCccccceEeecCCC---cccCCCCCC--CCC--
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF---NTQVPDYPM--PDN-- 78 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~-- 78 (433)
.+||+|||||++|+++|..|++.|. +|+|||+.+ +||.|....... ....+.. .+.+.++.. +..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~ 76 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKST------RTITPSFTSNGFGMPDMNAISMDTSP 76 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTC------BCSSCCCCCGGGTCCCTTCSSTTCCH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccc------cccCcchhcccCCchhhhhccccccc
Confidence 4799999999999999999999999 999999988 999987642211 1111111 111111110 111
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCC
Q psy2398 79 ----YPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGY 154 (433)
Q Consensus 79 ----~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~ 154 (433)
...++.+.++.+|+..+++++++ .++++++|+.++.+++.|.|++.++ ++.||+||+|||+++.|.+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~---- 149 (369)
T 3d1c_A 77 AFTFNEEHISGETYAEYLQVVANHYEL--NIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPF---- 149 (369)
T ss_dssp HHHHCCSSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCS----
T ss_pred cccccccCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCC----
Confidence 12356778899999999999988 5888999999998777899998877 589999999999966554443
Q ss_pred CCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCch
Q psy2398 155 FSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKE 234 (433)
Q Consensus 155 ~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~ 234 (433)
+..+|+..+.....+++++|+|||+|.+|+|+|..|++.+.+|+++.|++.+..+.+..... ++..+..
T Consensus 150 --~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~-------~~~~~~~-- 218 (369)
T 3d1c_A 150 --KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVR-------LSPYTRQ-- 218 (369)
T ss_dssp --SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTS-------CCHHHHH--
T ss_pred --CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCcc-------CCHHHHH--
Confidence 45678877877777788999999999999999999999999999999987643222111000 1111111
Q ss_pred HHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCC-eee--cCCceee--eCC--eEEecCCceee-
Q psy2398 235 ETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGD-ILP--KDDIKNL--NGN--IVHFVDDTHIE- 306 (433)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~~v~~~--~~~--~v~~~dG~~~~- 306 (433)
.+.+ .+.... |.+ ...|.++ ++. .+.+.||+++.
T Consensus 219 ---~l~~-----------------------------------~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~ 260 (369)
T 3d1c_A 219 ---RLGN-----------------------------------VIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHT 260 (369)
T ss_dssp ---HHHH-----------------------------------HHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEE
T ss_pred ---HHHH-----------------------------------HHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEecc
Confidence 1111 111222 443 4566777 333 46788998765
Q ss_pred ccEEEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccC----ChhhHHHHHHHHHHHHHhhhhcC
Q psy2398 307 VDTIIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAA----GLGDGLRLQGQFIRSYIQAFIRK 382 (433)
Q Consensus 307 ~D~vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~----~~~~~a~~qa~~~a~~i~g~~~l 382 (433)
+|.||+|||++|+++++....+....+++.+++..+.++.|+||++||++... ..+..++.||+++|++|.++.++
T Consensus 261 ~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~ 340 (369)
T 3d1c_A 261 PHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGL 340 (369)
T ss_dssp SSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTC
T ss_pred CCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCC
Confidence 69999999999998666544444344567788877889999999999998542 22346889999999999999999
Q ss_pred CCc
Q psy2398 383 SKG 385 (433)
Q Consensus 383 p~~ 385 (433)
|+.
T Consensus 341 p~~ 343 (369)
T 3d1c_A 341 PAK 343 (369)
T ss_dssp CCC
T ss_pred CCc
Confidence 997
No 9
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-36 Score=284.08 Aligned_cols=296 Identities=18% Similarity=0.239 Sum_probs=218.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++.... ..++.+ .....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~------~~~~~~------~~~~~~-------~~~~~ 64 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL------YPEKYI------YDVAGF-------PKVYA 64 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT------CTTSEE------CCSTTC-------SSEEH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc------CCCcee------eccCCC-------CCCCH
Confidence 46899999999999999999999999999999999999988654 222111 111111 11346
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCC-CCCCCCCCC--CCCCceecc
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQR-VARYPNYSG--YFSGEILHS 162 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s-~p~~p~i~g--~~~g~~~~~ 162 (433)
.++.+++.+.++++++ .++++++|+.++.+++.|.|++.++.++.||+||+|||..+ .|..|+++| .+.+..+|.
T Consensus 65 ~~~~~~l~~~~~~~~~--~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~ 142 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNP--VYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYY 142 (335)
T ss_dssp HHHHHHHHHHHGGGCC--EEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEES
T ss_pred HHHHHHHHHHHHHcCC--EEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEE
Confidence 7888899888888887 58889999999988778999998887899999999999865 578888888 455443433
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHH
Q psy2398 163 MDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQ 242 (433)
Q Consensus 163 ~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (433)
. +.+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+. +. + ...+.
T Consensus 143 ~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-~~-----~-------------------~~~~~ 196 (335)
T 2zbw_A 143 A-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-AH-----E-------------------ASVKE 196 (335)
T ss_dssp S-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-SC-----H-------------------HHHHH
T ss_pred e-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-cc-----H-------------------HHHHH
Confidence 2 344455678999999999999999999999999999999886421 10 0 11111
Q ss_pred HHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC----eEEec---CC--ceeeccEEE
Q psy2398 243 VFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFV---DD--THIEVDTII 311 (433)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~---dG--~~~~~D~vi 311 (433)
+.+.+ ....|++ ...+.++.+. .|.+. +| .++++|.||
T Consensus 197 l~~~l-------------------------------~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi 245 (335)
T 2zbw_A 197 LMKAH-------------------------------EEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVL 245 (335)
T ss_dssp HHHHH-------------------------------HTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred HHhcc-------------------------------ccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEE
Confidence 11111 1113332 2345555432 57776 77 568999999
Q ss_pred EccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEcccccc---CChhhHHHHHHHHHHHHHhhhh
Q psy2398 312 YATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAA---AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 312 ~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~---~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|||++|+.++++...+..+.+++.++. .+.++.|+||++|||+.. +..+..|..||+.+|.++.+.+
T Consensus 246 ~a~G~~p~~~~l~~~~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 316 (335)
T 2zbw_A 246 ILAGYITKLGPLANWGLALEKNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYA 316 (335)
T ss_dssp ECCCEEEECGGGGGSCCCEETTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCCchHhhhcceeccCCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 9999999998887655555556677765 457899999999999853 3466778899999999887654
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=9.4e-37 Score=286.44 Aligned_cols=291 Identities=17% Similarity=0.220 Sum_probs=222.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... |+..... .++.+ .....
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~------~~~~~~~------~~~~~-------~~~~~ 66 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL------YPEKYIY------DVAGF-------PKIRA 66 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH------CTTSEEC------CSTTC-------SSEEH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc------CCCceEe------ccCCC-------CCCCH
Confidence 45799999999999999999999999999999999999999643 3322211 11111 11247
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC-eEEEEEccCcEEEeCEEEEccCCCC-CCCCCCCCC--CCCCceec
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED-IWEVELSNGKKKKYDFIAVCNGAQR-VARYPNYSG--YFSGEILH 161 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~-~~~v~~~~g~~~~~d~vIvAtG~~s-~p~~p~i~g--~~~g~~~~ 161 (433)
.++.+++.++++++++ +++++++|+.++..++ .|.|++.+++ +.||+||+|||..+ .|..|+++| .|.+..+|
T Consensus 67 ~~~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~ 143 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQ--TICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLH 143 (332)
T ss_dssp HHHHHHHHHHHTTSCC--EEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEE
T ss_pred HHHHHHHHHHHHHhCC--cEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEE
Confidence 8899999999998887 6888999999998755 8999998876 99999999999865 788899999 56677777
Q ss_pred cCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHH
Q psy2398 162 SMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIK 241 (433)
Q Consensus 162 ~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (433)
+ .+.+...+++++++|||+|.+|+|+|..|.+.+.+|+++.|++.. .+. + ...+
T Consensus 144 ~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~-~~~-------~-----------------~~~~ 197 (332)
T 3lzw_A 144 Y-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF-RAH-------E-----------------HSVE 197 (332)
T ss_dssp S-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC-SSC-------H-----------------HHHH
T ss_pred E-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC-Ccc-------H-----------------HHHH
Confidence 7 666666778999999999999999999999999999999988642 110 0 1111
Q ss_pred HHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC----eEEecC-----CceeeccEE
Q psy2398 242 QVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFVD-----DTHIEVDTI 310 (433)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~d-----G~~~~~D~v 310 (433)
.+. ...|.+ ...+.++... .|.+.+ +.++++|.|
T Consensus 198 ~l~-----------------------------------~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~v 242 (332)
T 3lzw_A 198 NLH-----------------------------------ASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDL 242 (332)
T ss_dssp HHH-----------------------------------HSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEE
T ss_pred HHh-----------------------------------cCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEE
Confidence 110 112332 3345555543 377766 456899999
Q ss_pred EEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccc---cCChhhHHHHHHHHHHHHHhhhh
Q psy2398 311 IYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNA---AAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 311 i~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~---~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
|+|+|++|+.++++...+..+.+++.++. .+.++.|+||++|||+. .+..+..|..||+.+|.++....
T Consensus 243 v~a~G~~p~~~~~~~~~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 314 (332)
T 3lzw_A 243 IVNYGFVSSLGPIKNWGLDIEKNSIVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYM 314 (332)
T ss_dssp EECCCEECCCGGGGGSSCCEETTEEECCT-TSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccCCCchHHhhcCccccCCeEEeCC-CCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhh
Confidence 99999999999988666666666777766 45688999999999984 34567788999999998887654
No 11
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.3e-36 Score=275.18 Aligned_cols=281 Identities=14% Similarity=0.104 Sum_probs=214.0
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHHH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSM 87 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (433)
+||+|||||++|+++|..|++.|++|+|||+....++.+... ..+.. .......+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~------------------~~~~~-------~~~~~~~~ 57 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS------------------HGFLG-------QDGKAPGE 57 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC------------------CSSTT-------CTTCCHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh------------------cCCcC-------CCCCCHHH
Confidence 799999999999999999999999999999976433222111 00100 12356788
Q ss_pred HHHHHHHHHHHcC-CCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccCC
Q psy2398 88 MLDYLRSYAKKFD-VYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSMD 164 (433)
Q Consensus 88 ~~~~l~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~~ 164 (433)
+.+++.+.+++++ + ..++++|+.++++++.|.|++.++.++.||+||+|||. .|..|+++| .+.+..++...
T Consensus 58 ~~~~~~~~~~~~~~v---~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~--~~~~~~~~g~~~~~~~~~~~~~ 132 (297)
T 3fbs_A 58 IIAEARRQIERYPTI---HWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV--TDELPEIAGLRERWGSAVFHCP 132 (297)
T ss_dssp HHHHHHHHHTTCTTE---EEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC--EEECCCCBTTGGGBTTTEESCH
T ss_pred HHHHHHHHHHhcCCe---EEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC--CCCCCCCCCchhhcCCeeEEcc
Confidence 8999999888873 3 23366999999988889999999888999999999999 788899998 45555566655
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHH
Q psy2398 165 YKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVF 244 (433)
Q Consensus 165 ~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 244 (433)
+.....+++++|+|||+|.+|+|+|..|.+.+ +|+++.+++..+ .. .+.+.
T Consensus 133 ~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~-----------------~~---------~~~~~-- 183 (297)
T 3fbs_A 133 YCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEP-----------------DA---------DQHAL-- 183 (297)
T ss_dssp HHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCC-----------------CH---------HHHHH--
T ss_pred cCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCC-----------------CH---------HHHHH--
Confidence 55556677999999999999999999999998 999998775310 01 11111
Q ss_pred HHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee-cCCceeeeCC-eEEecCCceeeccEEEEccCCCCCCCC
Q psy2398 245 KLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP-KDDIKNLNGN-IVHFVDDTHIEVDTIIYATGYNRHFPF 322 (433)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~v~~~~~~-~v~~~dG~~~~~D~vi~atG~~~~~~~ 322 (433)
+....|++ ...++++.+. .|.+.||+++++|.||+|||++|+.++
T Consensus 184 ---------------------------------l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~ 230 (297)
T 3fbs_A 184 ---------------------------------LAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDW 230 (297)
T ss_dssp ---------------------------------HHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSC
T ss_pred ---------------------------------HHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchh
Confidence 11113332 3567777765 799999999999999999999999998
Q ss_pred CCcccccccC---C-ccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhhhc
Q psy2398 323 IDKEKLEWKL---G-IPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAFIR 381 (433)
Q Consensus 323 l~~~~~~~~~---~-~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~~ 381 (433)
++...+..+. + ++.++.. +.++.|+||++|||+..+..+..|..||+.+|.++.....
T Consensus 231 ~~~~g~~~~~~~~G~~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 231 IEKLGCAVEEGPMGSTIVTDPM-KQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp HHHHTCCEEEETTEEEECCCTT-CBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCccccCCCCceEEeCCC-CccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHh
Confidence 8765554432 3 4555554 6789999999999998777888999999999999876543
No 12
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.4e-35 Score=276.04 Aligned_cols=287 Identities=15% Similarity=0.162 Sum_probs=212.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|++||+. .+||.|..... +..++.+ +.....
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------------~~~~~~~------~~~~~~ 64 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE---------------VENFPGF------PEPIAG 64 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC---------------BCCSTTC------SSCBCH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc---------------cccCCCC------CCCCCH
Confidence 3579999999999999999999999999999998 78998876411 0011111 113457
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe--CCe-EEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCcee
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY--EDI-WEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEIL 160 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~--~~~-~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~ 160 (433)
.++.+++.+.++++++ .+++ .+|+.++.+ ++. |.|.+.++.++.||+||+|||. .|..|+++| .+.+..+
T Consensus 65 ~~~~~~l~~~~~~~gv--~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~--~~~~~~i~g~~~~~~~~~ 139 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGA--KVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA--DPRKLGIPGEDNFWGKGV 139 (325)
T ss_dssp HHHHHHHHHHHHHTTC--EEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE--EECCCCCTTTTTTBTTTE
T ss_pred HHHHHHHHHHHHHcCC--EEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC--CcCCCCCCChhhccCceE
Confidence 8899999999999887 4665 589999886 443 8888888888999999999998 788888988 4555555
Q ss_pred ccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 161 HSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 161 ~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
|.....+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+... . .+.
T Consensus 140 ~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~---------~~~ 194 (325)
T 2q7v_A 140 STCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN----------------K---------VAQ 194 (325)
T ss_dssp ESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC----------------H---------HHH
T ss_pred EEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc----------------h---------HHH
Confidence 554443334466899999999999999999999999999999988642100 0 111
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC----eEEec---CCc--eeeccE
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFV---DDT--HIEVDT 309 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~---dG~--~~~~D~ 309 (433)
+.+. ....|++ ...++++.+. +|.+. +|+ ++++|.
T Consensus 195 ~~l~----------------------------------~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~ 240 (325)
T 2q7v_A 195 ARAF----------------------------------ANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDG 240 (325)
T ss_dssp HHHH----------------------------------TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSE
T ss_pred HHHH----------------------------------hcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCE
Confidence 1111 0113332 3345555432 46665 676 689999
Q ss_pred EEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhhhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
||+|||++|+.++++.. +..+ .+++.+++. +.++.|+||++|||+.. +..+..|..||+.+|.++....
T Consensus 241 vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 311 (325)
T 2q7v_A 241 VFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDE-IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQL 311 (325)
T ss_dssp EEECSCEEESCGGGTTT-SCBCTTSCBCCBTT-TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCChHHHhhh-cccCCCccEecCCC-CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998754 4443 456666665 57899999999999875 4677889999999999987654
No 13
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.9e-35 Score=273.82 Aligned_cols=287 Identities=16% Similarity=0.223 Sum_probs=213.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++||+|||||++|+++|..|++.|+ +|++||+. ..||.|..... +..++. .+.....
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~---------------~~~~~~------~~~~~~~ 58 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE---------------IENYPG------VKEVVSG 58 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC---------------BCCSTT------CCSCBCH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc---------------cccCCC------CcccCCH
Confidence 3799999999999999999999999 99999995 68888765411 001111 1123567
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSM 163 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~ 163 (433)
.++.+++.+.++++++ .+++ ++|+.++.+++.|.+++.++.++.||+||+|||. .|..|+++| .|.+..+|..
T Consensus 59 ~~~~~~l~~~~~~~~v--~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~--~~~~~~~~g~~~~~~~~~~~~ 133 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGL--KHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG--SPKRTGIKGESEYWGKGVSTC 133 (311)
T ss_dssp HHHHHHHHHHHHTTSC--EEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE--EECCCCCBTHHHHBTTTEESC
T ss_pred HHHHHHHHHHHHHcCC--EEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC--CCCCCCCCChhhccCCcEEEe
Confidence 8899999999998887 4666 7899999888889998888888999999999998 778899988 4545555554
Q ss_pred CCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHH
Q psy2398 164 DYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQV 243 (433)
Q Consensus 164 ~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 243 (433)
...+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+... . .+.+.+
T Consensus 134 ~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~---------~~~~~l 188 (311)
T 2q0l_A 134 ATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA----------------P---------ITLEHA 188 (311)
T ss_dssp HHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC----------------H---------HHHHHH
T ss_pred ecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC----------------H---------HHHHHH
Confidence 443334456899999999999999999999999999999987642100 0 111111
Q ss_pred HHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC-----eEEec---CCc--eeeccEEE
Q psy2398 244 FKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN-----IVHFV---DDT--HIEVDTII 311 (433)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~-----~v~~~---dG~--~~~~D~vi 311 (433)
. ....|.+ ...+.++... .|.+. +|+ ++++|.||
T Consensus 189 ~----------------------------------~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi 234 (311)
T 2q0l_A 189 K----------------------------------NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFF 234 (311)
T ss_dssp H----------------------------------TCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEE
T ss_pred h----------------------------------hCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEE
Confidence 1 0113433 3345555432 46665 676 68999999
Q ss_pred EccCCCCCCCCCCccc----cccc-CCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhhhh
Q psy2398 312 YATGYNRHFPFIDKEK----LEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 312 ~atG~~~~~~~l~~~~----~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|+|++|+.++++... +..+ .+++.++.. +.++.|+||++|||+.. +..+..|..||+.+|.++...+
T Consensus 235 ~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 235 IFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFS-MKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp ECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccChhhhhcccccceeEeccCCCEEeCCc-cccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999987542 4443 456666654 57899999999999875 4677889999999999987643
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.5e-35 Score=277.00 Aligned_cols=285 Identities=18% Similarity=0.208 Sum_probs=214.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
++||+|||||++|+++|..|++.|++|+|||+. +||.|.+... ...++.+ ......
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~---------------~~~~~~~-------~~~~~~ 70 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI---------------VDDYLGL-------IEIQAS 70 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE---------------ECCSTTS-------TTEEHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc---------------ccccCCC-------CCCCHH
Confidence 479999999999999999999999999999998 8998876310 0001111 113468
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSMD 164 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~~ 164 (433)
++.+++.+.++++++ ++++ ++|+.++.+++.|.+++.++.++.||+||+|||. .|..|+++| .+.+..+|...
T Consensus 71 ~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~--~~~~~~i~g~~~~~~~~~~~~~ 145 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEV--PVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGV--KRRKLGVPGEQEFAGRGISYCS 145 (323)
T ss_dssp HHHHHHHHHHHTTTC--CEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCC--EECCCCCTTTTTTBTTTEESCH
T ss_pred HHHHHHHHHHHHcCC--EEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCC--CCccCCCCchhhhcCCceEEec
Confidence 899999999999888 4777 8999999888889999998888999999999999 688899998 55556666555
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHH
Q psy2398 165 YKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVF 244 (433)
Q Consensus 165 ~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 244 (433)
..+...+.+++|+|||+|.+|+|+|..|.+.+.+|+++.|++... +. + .+.+.+.
T Consensus 146 ~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-~~-----~-------------------~~~~~~~ 200 (323)
T 3f8d_A 146 VADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-AQ-----P-------------------IYVETVK 200 (323)
T ss_dssp HHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-SC-----H-------------------HHHHHHH
T ss_pred cCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-cC-----H-------------------HHHHHHH
Confidence 555556778999999999999999999999999999999886421 10 0 1111111
Q ss_pred HHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC----eEEecC---Cc--eeeccEEEEc
Q psy2398 245 KLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFVD---DT--HIEVDTIIYA 313 (433)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~d---G~--~~~~D~vi~a 313 (433)
....|.+ ...+.++... .|.+.+ |+ ++++|.||+|
T Consensus 201 ----------------------------------~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a 246 (323)
T 3f8d_A 201 ----------------------------------KKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIE 246 (323)
T ss_dssp ----------------------------------TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred ----------------------------------hCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEE
Confidence 1113443 3345666533 477766 77 6899999999
Q ss_pred cCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc---CChhhHHHHHHHHHHHHHhhhh
Q psy2398 314 TGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA---AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 314 tG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~---~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|++|+.++++...+.. ..+++.++. .+.++.|+||++|||+.. +..+..|..||+.+|.++....
T Consensus 247 ~G~~p~~~~~~~~g~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 247 IGFDPPTDFAKSNGIETDTNGYIKVDE-WMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp CCEECCHHHHHHTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCChhHHhhcCeeecCCCcEecCC-CceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHH
Confidence 99999988887655554 345666655 557899999999999874 5677889999999988886543
No 15
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=8.1e-35 Score=276.42 Aligned_cols=296 Identities=19% Similarity=0.249 Sum_probs=215.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++.... ...+.+ .....
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~------~~~~~~------~~~~~~-------~~~~~ 73 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL------YPEKHI------YDVAGF-------PEVPA 73 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT------CTTSEE------CCSTTC-------SSEEH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc------CCCccc------ccCCCC-------CCCCH
Confidence 35799999999999999999999999999999999999988643 121110 011110 01246
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEccCcEEEeCEEEEccCCCC-CCCCCCCCC---CCCCcee
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSNGKKKKYDFIAVCNGAQR-VARYPNYSG---YFSGEIL 160 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~g~~~~~d~vIvAtG~~s-~p~~p~i~g---~~~g~~~ 160 (433)
.++.+++.+.++++++ .++++++|+.++.++ +.|.|++.++.++.||+||+|||..+ .|..|+++| .+.+..+
T Consensus 74 ~~~~~~l~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v 151 (360)
T 3ab1_A 74 IDLVESLWAQAERYNP--DVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSV 151 (360)
T ss_dssp HHHHHHHHHHHHTTCC--EEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTE
T ss_pred HHHHHHHHHHHHHhCC--EEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceE
Confidence 7888999998888887 588899999999874 48999998888899999999999965 577777776 3444334
Q ss_pred ccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 161 HSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 161 ~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
|.. +++...+.+++|+|||+|.+|+|+|..|.+.+.+|+++.|++.+. +. + ...
T Consensus 152 ~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-~~-----~-------------------~~~ 205 (360)
T 3ab1_A 152 YYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-GH-----G-------------------KTA 205 (360)
T ss_dssp ESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-SC-----S-------------------HHH
T ss_pred EEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-CC-----H-------------------HHH
Confidence 332 344556678999999999999999999999999999999886421 10 0 000
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeC--C---eEEec--CC--ceeeccE
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNG--N---IVHFV--DD--THIEVDT 309 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~--~---~v~~~--dG--~~~~~D~ 309 (433)
+. +.+......|++ ...+.++.. . .|.+. +| .++++|.
T Consensus 206 ~~-------------------------------l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~ 254 (360)
T 3ab1_A 206 HE-------------------------------VERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADR 254 (360)
T ss_dssp HS-------------------------------SHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSE
T ss_pred HH-------------------------------HHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCE
Confidence 00 011111113443 234555542 2 56664 78 4689999
Q ss_pred EEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEcccccc---CChhhHHHHHHHHHHHHHhhhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAA---AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~---~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
||+|||++|+.++++...+..+.+++.++. .+.++.|+||++|||+.. +..+..|..||+.+|.++.+..
T Consensus 255 vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 327 (360)
T 3ab1_A 255 LLILIGFKSNLGPLARWDLELYENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYI 327 (360)
T ss_dssp EEECCCBCCSCGGGGGSSCCEETTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHhhccccccCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhc
Confidence 999999999998887655555556777766 457889999999999853 3566788899999998887654
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=4.4e-35 Score=275.79 Aligned_cols=289 Identities=19% Similarity=0.222 Sum_probs=216.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC----CCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME----SDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~----~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (433)
.++||+|||||++|+++|..|++.|++|+|||+. ..+||.|..... ...++. ++.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~---------------~~~~~~------~~~ 79 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE---------------IENFPG------FPD 79 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE---------------ECCSTT------CTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh---------------hcccCC------Ccc
Confidence 4589999999999999999999999999999994 478888876410 011111 123
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cCcEEEeCEEEEccCCCCCCCCCCCCC--CCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NGKKKKYDFIAVCNGAQRVARYPNYSG--YFS 156 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~ 156 (433)
+....++.+++...++++++ .+++++ |+.++.+++.|.+++. ++.++.||+||+|||. .|..|+++| .+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv--~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~--~~~~~~~~g~~~~~ 154 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGT--EIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA--SAKRMHLPGEETYW 154 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTC--EEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE--EECCCCCTTHHHHB
T ss_pred cCCHHHHHHHHHHHHHHcCC--EEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC--CcCCCCCCCchhcc
Confidence 45578999999999999988 588887 9999988888999884 5667999999999999 788999998 455
Q ss_pred CceeccCCCCCCC--CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCch
Q psy2398 157 GEILHSMDYKSPD--QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKE 234 (433)
Q Consensus 157 g~~~~~~~~~~~~--~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~ 234 (433)
+..++........ .+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++.+... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~~--------------------~-- 212 (338)
T 3itj_A 155 QKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAS--------------------T-- 212 (338)
T ss_dssp TTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC--------------------H--
T ss_pred CccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCCC--------------------H--
Confidence 5555554433333 467899999999999999999999999999999988642110 0
Q ss_pred HHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC-----eEEecC-----C
Q psy2398 235 ETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN-----IVHFVD-----D 302 (433)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~-----~v~~~d-----G 302 (433)
.+.+.+. ....|++ ...+.++... .|.+.+ +
T Consensus 213 ---~~~~~l~----------------------------------~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~ 255 (338)
T 3itj_A 213 ---IMQKRAE----------------------------------KNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEE 255 (338)
T ss_dssp ---HHHHHHH----------------------------------HCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEE
T ss_pred ---HHHHHHH----------------------------------hcCCeEEeecceeEEEEcccCcEEEEEEEECCCCce
Confidence 1111111 0113333 3455666432 267765 4
Q ss_pred ceeeccEEEEccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhhhh
Q psy2398 303 THIEVDTIIYATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 303 ~~~~~D~vi~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
.++++|.||+|||++|+.++++. .+.. +.+++.+.+..+.++.|+||++|||+.. +..+..|..||+.+|.++...+
T Consensus 256 ~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 334 (338)
T 3itj_A 256 TDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYL 334 (338)
T ss_dssp EEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHH
Confidence 57999999999999999998875 5554 3556666677778999999999999964 4566788999999998887654
No 17
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=3.1e-34 Score=267.28 Aligned_cols=287 Identities=18% Similarity=0.250 Sum_probs=213.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEE-EccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDL-YEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v-~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..++||+|||||++|+++|..|++.|++|++ +|+ +.+||.|..... +..++. .+...
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~---------------~~~~~~------~~~~~ 59 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE---------------IENYPG------VAQVM 59 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC---------------BCCSTT------CCSCB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece---------------eccCCC------CCCCC
Confidence 3568999999999999999999999999999 999 678998876511 000111 11234
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC--CeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCce
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE--DIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEI 159 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~--~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~ 159 (433)
...++..++.++++++++ .++++ +|+.+ .++ +.|.+++..+.++.||+||+|||. .|..|+++| .+.+..
T Consensus 60 ~~~~~~~~~~~~~~~~~v--~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~--~~~~~~~~g~~~~~~~~ 133 (315)
T 3r9u_A 60 DGISFMAPWSEQCMRFGL--KHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGS--APKKAGFKGEDEFFGKG 133 (315)
T ss_dssp CHHHHHHHHHHHHTTTCC--EEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCE--EECCCCCBTTTTTBTTT
T ss_pred CHHHHHHHHHHHHHHcCc--EEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCC--CCCCCCCCChhhcCCCe
Confidence 678999999999999988 47766 88999 776 789853333228999999999998 889999998 566666
Q ss_pred eccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHH
Q psy2398 160 LHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAY 239 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (433)
+|+..+.....+.+++++|||+|.+|+|+|..|.+.+.+|+++.+++.+... . .+
T Consensus 134 ~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~----------------~---------~~ 188 (315)
T 3r9u_A 134 VSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA----------------P---------ST 188 (315)
T ss_dssp EESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC----------------H---------HH
T ss_pred EEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC----------------H---------HH
Confidence 7766655555667899999999999999999999999999999988642100 0 11
Q ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeCC-----eEEec--CCc--eeecc
Q psy2398 240 IKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNGN-----IVHFV--DDT--HIEVD 308 (433)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~~-----~v~~~--dG~--~~~~D 308 (433)
.+... ....|+ ....+.++... .+.+. +|+ ++++|
T Consensus 189 ~~~~~----------------------------------~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D 234 (315)
T 3r9u_A 189 VEKVK----------------------------------KNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVP 234 (315)
T ss_dssp HHHHH----------------------------------HCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCS
T ss_pred HHHHH----------------------------------hcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecC
Confidence 11111 011333 34456666432 26665 886 68999
Q ss_pred EEEEccCCCCCCCCCCc---cc-cccc-CCccccccccccCCCCcEEEEccccc-cCChhhHHHHHHHHHHHHHhhh
Q psy2398 309 TIIYATGYNRHFPFIDK---EK-LEWK-LGIPDLFIHIAPRNLDNIFFFGFVNA-AAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 309 ~vi~atG~~~~~~~l~~---~~-~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~-~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
.||+|+|++|+.++++. .. +..+ .+++.++. .+.++.|+||++|||+. .+..+..|..||+.+|.++...
T Consensus 235 ~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (315)
T 3r9u_A 235 GIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAY 310 (315)
T ss_dssp CEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCchhhhcccccceeeecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHH
Confidence 99999999999988875 21 4443 35666665 55789999999999975 3466788999999999888654
No 18
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-34 Score=269.55 Aligned_cols=286 Identities=15% Similarity=0.175 Sum_probs=209.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|++||+. ..||.|..... ...++.+ +.....
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------------~~~~~~~------~~~~~~ 70 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD---------------VENYPGF------RNGITG 70 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC---------------BCCSTTC------TTCBCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch---------------hhhcCCC------CCCCCH
Confidence 4579999999999999999999999999999975 68888765411 0011111 112356
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEE-EEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceecc
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEV-ELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHS 162 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v-~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~ 162 (433)
.++.+++.+.++++++ .+++++ |+.++. .+.|.| .+.++.++.||+||+|||. .|..|+++| .+.+..+|+
T Consensus 71 ~~~~~~l~~~~~~~~v--~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~--~~~~~~i~g~~~~~~~~~~~ 144 (335)
T 2a87_A 71 PELMDEMREQALRFGA--DLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGA--AARYLQVPGEQELLGRGVSS 144 (335)
T ss_dssp HHHHHHHHHHHHHTTC--EEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCE--EECCCCCTHHHHTBTTTEES
T ss_pred HHHHHHHHHHHHHcCC--EEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCC--CccCCCCCchHhccCCceEE
Confidence 7889999999998887 477776 888887 667888 7878878999999999998 788889988 455555555
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHH
Q psy2398 163 MDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQ 242 (433)
Q Consensus 163 ~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (433)
........+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+... . .+.+.
T Consensus 145 ~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~----------------~---------~~~~~ 199 (335)
T 2a87_A 145 CATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS----------------K---------IMLDR 199 (335)
T ss_dssp CHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC----------------T---------THHHH
T ss_pred eeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc----------------H---------HHHHH
Confidence 4333333356899999999999999999999999999999988642110 0 11111
Q ss_pred HHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC----eEEec---CC--ceeeccEEE
Q psy2398 243 VFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFV---DD--THIEVDTII 311 (433)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~---dG--~~~~~D~vi 311 (433)
+. ....|++ ...+.++.+. .+.+. +| +++++|.||
T Consensus 200 ~~----------------------------------~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi 245 (335)
T 2a87_A 200 AR----------------------------------NNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVF 245 (335)
T ss_dssp HH----------------------------------HCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEE
T ss_pred Hh----------------------------------ccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEE
Confidence 11 1113333 3345555433 36665 45 468999999
Q ss_pred EccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhhh
Q psy2398 312 YATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 312 ~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+|||++|+.++++ ..+.. ..+++.+++..+.++.|+||++|||+.. ......|..||+.+|.++...
T Consensus 246 ~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~ 314 (335)
T 2a87_A 246 VAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERW 314 (335)
T ss_dssp ECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999887 34444 3466777776778999999999999875 345677888888888877543
No 19
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.8e-34 Score=264.43 Aligned_cols=286 Identities=14% Similarity=0.167 Sum_probs=206.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
.+||+|||||++|+++|..|++.|++|++||+ ...||.|..... +..++.+ ......
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~---------------~~~~~~~-------~~~~~~ 72 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPL---------------VENYLGF-------KSIVGS 72 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSC---------------BCCBTTB-------SSBCHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccch---------------hhhcCCC-------cccCHH
Confidence 47999999999999999999999999999999 468888765411 0001110 124567
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSMD 164 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~~ 164 (433)
++.+++.+.++++++ .+++ .+|..++.+++.|.|.+ ++.++.||+||+|||. .|..|+++| .+.+..+|...
T Consensus 73 ~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~--~~~~~~i~g~~~~~~~~~~~~~ 146 (319)
T 3cty_A 73 ELAKLFADHAANYAK--IREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGT--THKHLGVKGESEYFGKGTSYCS 146 (319)
T ss_dssp HHHHHHHHHHHTTSE--EEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCE--EECCCCCBTTTTTBTTTEESCH
T ss_pred HHHHHHHHHHHHcCC--EEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCC--CcccCCCCChHHhCCceEEEEE
Confidence 888889888888876 4665 68999998888888887 4567999999999998 678888888 33334444332
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHH
Q psy2398 165 YKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVF 244 (433)
Q Consensus 165 ~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 244 (433)
..+...+.+++++|||+|.+|+|+|..|++.+.+|++++|++.+... . .+.+.+.
T Consensus 147 ~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~----------------~---------~l~~~l~ 201 (319)
T 3cty_A 147 TCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE----------------N---------AYVQEIK 201 (319)
T ss_dssp HHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC----------------H---------HHHHHHH
T ss_pred ecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC----------------H---------HHHHHHh
Confidence 22223456899999999999999999999999999999987642100 0 1111111
Q ss_pred HHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC-----eEEec---CCc--eeeccEEEEcc
Q psy2398 245 KLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN-----IVHFV---DDT--HIEVDTIIYAT 314 (433)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~-----~v~~~---dG~--~~~~D~vi~at 314 (433)
..++ ++.....+.++... ++.+. +|+ ++++|.||+||
T Consensus 202 --------~~gv-------------------------~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (319)
T 3cty_A 202 --------KRNI-------------------------PYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYV 248 (319)
T ss_dssp --------HTTC-------------------------CEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECC
T ss_pred --------cCCc-------------------------EEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEee
Confidence 0111 22223344454321 45664 676 58999999999
Q ss_pred CCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhhhh
Q psy2398 315 GYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 315 G~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
|++|+.++++...+..+ .+++.++.. +.++.|+||++|||+.. ...+..|..||+.+|.++...+
T Consensus 249 G~~p~~~~l~~~gl~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 315 (319)
T 3cty_A 249 GLIPQTSFLKDSGVKLDERGYIVVDSR-QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDS 315 (319)
T ss_dssp CEEECCGGGTTSCCCBCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccChHHHhhccccccCCccEeCCCC-CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999886555543 356666655 57899999999999875 3567789999999999987654
No 20
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=5.8e-34 Score=266.07 Aligned_cols=290 Identities=20% Similarity=0.284 Sum_probs=208.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|++||+. ..||.|..... ...++. ++.....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------------~~~~~~------~~~~~~~ 61 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE---------------VENWPG------DPNDLTG 61 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB---------------CCCSTT------CCSSCBH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh---------------hhhCCC------CCCCCCH
Confidence 3479999999999999999999999999999974 68887765310 001111 1122456
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSM 163 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~ 163 (433)
.++.+++...++++++ .+++++ |+.++.+.+.|.+ +.++.++.||+||+|||. .|..|+++| .+.+..+|+.
T Consensus 62 ~~~~~~~~~~~~~~~~--~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~--~~~~~~~~g~~~~~~~~~~~~ 135 (320)
T 1trb_A 62 PLLMERMHEHATKFET--EIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGA--SARYLGLPSEEAFKGRGVSAC 135 (320)
T ss_dssp HHHHHHHHHHHHHTTC--EEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCE--EECCCCCHHHHHTBTTTEESC
T ss_pred HHHHHHHHHHHHHCCC--EEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCC--CcCCCCCCChHHhCCceeEec
Confidence 7888999999998887 477775 8888877778888 667778999999999998 678888888 4444445544
Q ss_pred CCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHH
Q psy2398 164 DYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQV 243 (433)
Q Consensus 164 ~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 243 (433)
...+.....+++|+|||+|.+|+|+|..|.+.+.+|+++.|++.+... . .+.+.+
T Consensus 136 ~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~---------~~~~~l 190 (320)
T 1trb_A 136 ATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE----------------K---------ILIKRL 190 (320)
T ss_dssp HHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC----------------H---------HHHHHH
T ss_pred ccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC----------------H---------HHHHHH
Confidence 333333456899999999999999999999999999999988642110 0 111111
Q ss_pred HHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC-----eEEecC----C--ceeeccEE
Q psy2398 244 FKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN-----IVHFVD----D--THIEVDTI 310 (433)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~-----~v~~~d----G--~~~~~D~v 310 (433)
.+.+ ....|++ ...+.++... +|.+.+ | .++++|.|
T Consensus 191 ~~~l-------------------------------~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~v 239 (320)
T 1trb_A 191 MDKV-------------------------------ENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239 (320)
T ss_dssp HHHH-------------------------------HTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEE
T ss_pred HHhc-------------------------------ccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEE
Confidence 1111 1113443 4456666432 266665 5 46899999
Q ss_pred EEccCCCCCCCCCCcccccccCCcccccccc----ccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHhhhh
Q psy2398 311 IYATGYNRHFPFIDKEKLEWKLGIPDLFIHI----APRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 311 i~atG~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~g~~ 380 (433)
|+|||++|+.++++ ..+..+++++.++..+ +.++.|+||++|||+..+ .....|..||+.+|..+...+
T Consensus 240 v~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 313 (320)
T 1trb_A 240 FVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYL 313 (320)
T ss_dssp EECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHH
Confidence 99999999998887 3344445566666653 578899999999998753 456778899999998886554
No 21
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=5.4e-34 Score=267.86 Aligned_cols=287 Identities=18% Similarity=0.228 Sum_probs=205.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEcc----CCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEM----ESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~----~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (433)
.++||+|||||++|+++|..|++.|++|++||+ ....||.|..... ...++.+ +.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---------------~~~~~~~------~~ 65 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD---------------VENFPGF------PE 65 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE---------------ECCSTTC------TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc---------------cccCCCC------cc
Confidence 347999999999999999999999999999998 5567776654310 0011111 12
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--C----C
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--Y----F 155 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~----~ 155 (433)
.....++.+++.+.+++.++ .+++++ |..++.+++.|+|++ ++.++.||+||+|||. .|..|+++| . |
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv--~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~--~~~~~~~~g~~~~~~~~ 139 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGT--TIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGA--VAKRLSFVGSGEVLGGF 139 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTC--EEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCE--EECCCCCBTCSSSSSCC
T ss_pred CCCHHHHHHHHHHHHHHCCC--EEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCC--CcCCCCCCCcccccccc
Confidence 23467888999999988887 477775 888887777888888 6778999999999999 678888888 2 4
Q ss_pred CCceeccCCCCCCCC--CCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCc
Q psy2398 156 SGEILHSMDYKSPDQ--IRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSK 233 (433)
Q Consensus 156 ~g~~~~~~~~~~~~~--~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~ 233 (433)
.+..+|+........ ..+++|+|||+|.+|+|+|..|.+.+.+|+++.|++.+... .
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~----------------~----- 198 (333)
T 1vdc_A 140 WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS----------------K----- 198 (333)
T ss_dssp BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCSC----------------H-----
T ss_pred ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCcc----------------H-----
Confidence 444455443322222 56899999999999999999999999999999988642100 0
Q ss_pred hHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC-------eEEec---C
Q psy2398 234 EETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN-------IVHFV---D 301 (433)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~-------~v~~~---d 301 (433)
.+.+... ....|++ ...+.++.+. .|.+. +
T Consensus 199 ----~~~~~~~----------------------------------~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~ 240 (333)
T 1vdc_A 199 ----IMQQRAL----------------------------------SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVT 240 (333)
T ss_dssp ----HHHHHHH----------------------------------TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTT
T ss_pred ----HHHHHHH----------------------------------hCCCeeEecCCceEEEeCCCCccceeeEEEEecCC
Confidence 1111111 1113433 3345555422 26665 4
Q ss_pred C--ceeeccEEEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHh
Q psy2398 302 D--THIEVDTIIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQ 377 (433)
Q Consensus 302 G--~~~~~D~vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~ 377 (433)
| .++++|.||+|||++|+.++++. .+..+ .+++.+++..+.++.|+||++|||+..+ .....|..||+.+|.++.
T Consensus 241 g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 319 (333)
T 1vdc_A 241 GDVSDLKVSGLFFAIGHEPATKFLDG-GVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAE 319 (333)
T ss_dssp CCEEEEECSEEEECSCEEESCGGGTT-SSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEecCEEEEEeCCccchHHhhc-cccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHH
Confidence 5 46899999999999999998873 44443 4667777766788999999999998753 456678888888777665
Q ss_pred hh
Q psy2398 378 AF 379 (433)
Q Consensus 378 g~ 379 (433)
..
T Consensus 320 ~~ 321 (333)
T 1vdc_A 320 HY 321 (333)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 22
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.3e-33 Score=262.59 Aligned_cols=284 Identities=17% Similarity=0.168 Sum_probs=206.8
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHHH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSM 87 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (433)
+||+|||||++|+++|..|++.|++|+++|+ ..||.|..... . ..+.. ..+....+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~----~-----------~~~~~-------~~~~~~~~ 57 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVD----I-----------ENYIS-------VPKTEGQK 57 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCE----E-----------CCBTT-------BSSEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccc----c-----------ccccC-------cCCCCHHH
Confidence 7999999999999999999999999999986 47888875310 0 00000 02345678
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEe---CCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceecc
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQY---EDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHS 162 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~---~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~ 162 (433)
+.+++.++++++++ .++++++|+.++.+ ++.|.|++.++.++.||+||+|||+ .|..|+++| .+.+..+|.
T Consensus 58 ~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~--~~~~~~~~g~~~~~~~~~~~ 133 (310)
T 1fl2_A 58 LAGALKVHVDEYDV--DVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA--KWRNMNVPGEDQYRTKGVTY 133 (310)
T ss_dssp HHHHHHHHHHTSCE--EEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE--EECCCCCTTTTTTBTTTEES
T ss_pred HHHHHHHHHHHcCC--eEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC--CcCCCCCCChhhcccceeEE
Confidence 89999999988887 58888899999865 2479999988878999999999998 678888888 454444554
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHH
Q psy2398 163 MDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQ 242 (433)
Q Consensus 163 ~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (433)
........+.+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+... . .+.+.
T Consensus 134 ~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~---------~~~~~ 188 (310)
T 1fl2_A 134 CPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----------------Q---------VLQDK 188 (310)
T ss_dssp CHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC----------------H---------HHHHH
T ss_pred eccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc----------------H---------HHHHH
Confidence 3332233456899999999999999999999999999999988742100 0 11111
Q ss_pred HHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeCC-----eEEecC---Cc--eeeccEE
Q psy2398 243 VFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNGN-----IVHFVD---DT--HIEVDTI 310 (433)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~-----~v~~~d---G~--~~~~D~v 310 (433)
+. . ...|++ ...+.++.+. .+.+.+ |+ ++++|.|
T Consensus 189 l~----~------------------------------~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~v 234 (310)
T 1fl2_A 189 LR----S------------------------------LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGI 234 (310)
T ss_dssp HH----T------------------------------CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred Hh----h------------------------------CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEE
Confidence 11 0 013332 3345555432 466654 54 5899999
Q ss_pred EEccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHhhhh
Q psy2398 311 IYATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 311 i~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~g~~ 380 (433)
|+|||++|+.++++.. +.. ..+++.+++.+ .++.|+||++|||+..+ .....|..||+.+|.++...+
T Consensus 235 i~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~-~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 235 FVQIGLLPNTNWLEGA-VERNRMGEIIIDAKC-ETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp EECSCEEESCGGGTTT-SCBCTTSCBCCCTTC-BCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCccCchHHhcc-ccccCCCcEEcCCCC-ccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHH
Confidence 9999999999888753 444 34566666654 68999999999998754 456788899999998887543
No 23
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=9.2e-34 Score=264.01 Aligned_cols=290 Identities=17% Similarity=0.186 Sum_probs=195.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+||||||+|++||..|+++|++|+|||+.. .||.+... .+++... +..++.+ +.....
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~G----~~~~~~~------i~~~~g~------~~~i~~ 65 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAGG----QLTTTTI------IENFPGF------PNGIDG 65 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTTC----GGGGSSE------ECCSTTC------TTCEEH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccCC----CcCChHH------hhhccCC------cccCCH
Confidence 57999999999999999999999999999999864 55555432 1221111 1112111 123456
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceeccC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHSM 163 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~~ 163 (433)
.++.+.+...+++++. ......+..+....+.+.+.+.++.++.||+||+|||+ .|+.|++|| .+.+..++..
T Consensus 66 ~~l~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~--~~~~~~ipG~~~~~~~~~~~~ 140 (314)
T 4a5l_A 66 NELMMNMRTQSEKYGT---TIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA--TAKRMHVPGEDKYWQNGVSAC 140 (314)
T ss_dssp HHHHHHHHHHHHHTTC---EEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE--EECCCCCTTHHHHBTTTEESC
T ss_pred HHHHHHHHHHHhhcCc---EEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccc--cccccCCCccccccccceeee
Confidence 7888888888988876 23345666666666777788888888999999999998 899999999 3333444443
Q ss_pred CCCCC--CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHH
Q psy2398 164 DYKSP--DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIK 241 (433)
Q Consensus 164 ~~~~~--~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (433)
.+... ..+++++++|||+|.+|+|+|..|++.|.+||+++|.+....+. ....
T Consensus 141 ~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~-------------------------~~~~ 195 (314)
T 4a5l_A 141 AICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASK-------------------------TMQE 195 (314)
T ss_dssp HHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCH-------------------------HHHH
T ss_pred hhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccc-------------------------hhhh
Confidence 33322 23568999999999999999999999999999999876421110 1111
Q ss_pred HHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeee---C--CeEE-----ecCCceeeccE
Q psy2398 242 QVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLN---G--NIVH-----FVDDTHIEVDT 309 (433)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~---~--~~v~-----~~dG~~~~~D~ 309 (433)
... . .. .+.. ...+.++. . ..+. ..+++++++|.
T Consensus 196 ~~~---~-~~------------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~ 241 (314)
T 4a5l_A 196 RVL---N-HP------------------------------KIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAG 241 (314)
T ss_dssp HHH---T-CT------------------------------TEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSE
T ss_pred hhh---c-cc------------------------------ceeeEeeeeeEEEEeeeeccceeEEeecccccceeecccc
Confidence 100 0 00 0000 00111111 0 1122 23456799999
Q ss_pred EEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~g 378 (433)
|++|+|++|+..++... +....++..+++ .+.|+.|+|||+|||+..+ .....|..|++.+|..+..
T Consensus 242 vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~ 309 (314)
T 4a5l_A 242 LFYAIGHSPNSKFLGGQ-VKTADDGYILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEK 309 (314)
T ss_dssp EEECSCEEESCGGGTTS-SCBCTTSCBCCB-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEecccccChhHhccc-ceEcCCeeEeCC-CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999998754 333334444555 4589999999999998754 3566777788888776643
No 24
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-33 Score=260.34 Aligned_cols=285 Identities=16% Similarity=0.125 Sum_probs=192.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
+..|||+||||||+|++||..|++.|++|+|||+. .+||++.+..+ .+ .++.+ ....
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~----i~-----------~~p~~-------~~~~ 60 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEE----VE-----------NFPGF-------EMIT 60 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----BC-----------CSTTC-------SSBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccc----cC-----------CcCCc-------cccc
Confidence 34599999999999999999999999999999985 68888765411 10 11111 1234
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceecc
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHS 162 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~ 162 (433)
..++.........+... .+..+..+..... .. ..+...++.++.||+||+|||+ .|+.|++|| .+.+..++.
T Consensus 61 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~d~liiAtGs--~~~~~~ipG~~~~~~~~v~~ 134 (312)
T 4gcm_A 61 GPDLSTKMFEHAKKFGA--VYQYGDIKSVEDK-GE-YKVINFGNKELTAKAVIIATGA--EYKKIGVPGEQELGGRGVSY 134 (312)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEECCCCEEEEC-SS-CEEEECSSCEEEEEEEEECCCE--EECCCCCTTTTTTBTTTEES
T ss_pred hHHHHHHHHHHHhhccc--cccceeeeeeeee-ec-ceeeccCCeEEEeceeEEcccC--ccCcCCCCChhhhCCccEEe
Confidence 56666666666666554 3444444433332 22 2344456678999999999998 899999999 455556665
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHH
Q psy2398 163 MDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQ 242 (433)
Q Consensus 163 ~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (433)
....+...+++|+|+|||+|++|+|+|..|++.+.+||+++|++.. +|.. ...+.
T Consensus 135 ~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-~~~~------------------------~~~~~ 189 (312)
T 4gcm_A 135 CAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL-RAQR------------------------ILQDR 189 (312)
T ss_dssp CHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC-CSCH------------------------HHHHH
T ss_pred eeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc-Ccch------------------------hHHHH
Confidence 5555555677999999999999999999999999999999988742 1110 00111
Q ss_pred HHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecC-----Cceeee----CCe-EEe--cCCceeeccEE
Q psy2398 243 VFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKD-----DIKNLN----GNI-VHF--VDDTHIEVDTI 310 (433)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----~v~~~~----~~~-v~~--~dG~~~~~D~v 310 (433)
.. ... .+.... .+...+ ... ... .++..+++|.|
T Consensus 190 ~~---~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (312)
T 4gcm_A 190 AF---KND-------------------------------KIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGV 235 (312)
T ss_dssp HH---HCT-------------------------------TEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEE
T ss_pred HH---Hhc-------------------------------CcceeeecceeeeeccccccccceeeeecCCceeEEeeeeE
Confidence 00 000 111000 000000 001 111 23346899999
Q ss_pred EEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHHHHHHHhh
Q psy2398 311 IYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 311 i~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~~a~~i~g 378 (433)
++++|.+|+..++....+..+.+.+.+++ .+.|+.|+||++|||+.. ...+..|..|++.+|.++..
T Consensus 236 ~~~~g~~~~~~~~~~~g~~~~~G~I~vd~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 236 FIYIGMKPLTAPFKDLGITNDVGYIVTKD-DMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp EECSCEEESCGGGGGGTCBCTTSCBCCCT-TSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcCchhHHhcceecCCCeEeeCC-CCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999998887665555556666665 558999999999999864 35677888999999888854
No 25
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.8e-34 Score=274.83 Aligned_cols=279 Identities=16% Similarity=0.176 Sum_probs=192.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
+.++|+|||||++|+++|..|...+.+|+|||+.+..+. ..+ ..+. .+. .....
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y----~~~---~l~~-------~l~------------g~~~~ 61 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY----YRP---RLNE-------IIA------------KNKSI 61 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB----CGG---GHHH-------HHH------------SCCCG
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc----ccC---hhhH-------HHc------------CCCCH
Confidence 457999999999999999999778899999999876541 100 0000 000 00111
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDY 165 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~ 165 (433)
.++..+..++.+++++ .++++++|+.|+++.+ +|++.+++++.||+||+|||+ .|+.|+++|.. .+.+....
T Consensus 62 ~~l~~~~~~~~~~~~i--~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~--~p~~p~i~G~~--~v~~~~~~ 133 (385)
T 3klj_A 62 DDILIKKNDWYEKNNI--KVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS--IANKIKVPHAD--EIFSLYSY 133 (385)
T ss_dssp GGTBSSCHHHHHHTTC--EEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE--EECCCCCTTCS--CEECCSSH
T ss_pred HHccCCCHHHHHHCCC--EEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC--CcCCCCCCCCC--CeEEeCCH
Confidence 1222223344556677 5888999999987544 677888888999999999998 89999999822 33333322
Q ss_pred CCCCCC-----CCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 166 KSPDQI-----RNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 166 ~~~~~~-----~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
.+...+ .+++|+|||+|.+|+|+|..|++.+.+|+++.+++.+ +++. +.. ...
T Consensus 134 ~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~-l~~~----------------~~~-----~~~ 191 (385)
T 3klj_A 134 DDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP-LERQ----------------LDR-----DGG 191 (385)
T ss_dssp HHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS-CTTT----------------SCH-----HHH
T ss_pred HHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc-chhh----------------cCH-----HHH
Confidence 222212 2789999999999999999999999999999988752 2221 111 111
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEecCCceeeccEEEEccCCCCCC
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHF 320 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~ 320 (433)
+.+.+.+. ..++ ++.....++++ |+++++|.||+|||++|+.
T Consensus 192 ~~~~~~l~----~~gV-------------------------~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~ 233 (385)
T 3klj_A 192 LFLKDKLD----RLGI-------------------------KIYTNSNFEEM---------GDLIRSSCVITAVGVKPNL 233 (385)
T ss_dssp HHHHHHHH----TTTC-------------------------EEECSCCGGGC---------HHHHHHSEEEECCCEEECC
T ss_pred HHHHHHHH----hCCC-------------------------EEEeCCEEEEc---------CeEEecCeEEECcCcccCh
Confidence 11111111 1111 22233445444 6778999999999999999
Q ss_pred CCCCcccccccCCccccccccccCCCCcEEEEcccccc----CChhhHHHHHHHHHHHHHhhhh
Q psy2398 321 PFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAA----AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~----~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
++++...+..++ ++.++ ..+.++.|+||++|||+.. +..+..|..||+.+|.+|.|+.
T Consensus 234 ~~~~~~gl~~~~-gi~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 234 DFIKDTEIASKR-GILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp GGGTTSCCCBSS-SEEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhcCCCcCC-CEEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 998876666654 45555 4557899999999999862 4567899999999999999864
No 26
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=6.1e-32 Score=264.85 Aligned_cols=299 Identities=16% Similarity=0.120 Sum_probs=199.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC-C---cccCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK-F---NTQVPDYPMPDNYPVY 82 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~ 82 (433)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.+.. |.++..+.... . +..++.. ...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~g----ciPsk~l~~~a~~~~~~~~~~~~------~~~ 73 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSG----CVPSKTVREVIQTAWRLTNIANV------KIP 73 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHHHHCS------CCC
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccC----CCchHHHHHHHHHHHHHHhcccC------CCC
Confidence 58999999999999999999999999999999999999998642 22221111000 0 0000000 011
Q ss_pred CCHHHHHH------------HHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcE--EEeCEEEEccCCCCCCCC
Q psy2398 83 PNHSMMLD------------YLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKK--KKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 83 ~~~~~~~~------------~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~--~~~d~vIvAtG~~s~p~~ 148 (433)
.....+.. ++....++.++ .+. ..++..++ .+.+.|.+.+++. +.||+||+|||+ .|..
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~-~g~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~--~p~~ 146 (466)
T 3l8k_A 74 LDFSTVQDRKDYVQELRFKQHKRNMSQYETL--TFY-KGYVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGA--ETAK 146 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCTTE--EEE-SEEEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCE--EECC
T ss_pred cCHHHHHHHHHhheeccccchHHHHHHhCCC--EEE-EeEEEEec--CCeEEEEcCCCcEEEEecCEEEECCCC--CccC
Confidence 22222222 22222223333 222 33555554 5788998888888 999999999998 8999
Q ss_pred CCCCCCCCCceeccCCCC---CCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHh
Q psy2398 149 PNYSGYFSGEILHSMDYK---SPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQ 225 (433)
Q Consensus 149 p~i~g~~~g~~~~~~~~~---~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 225 (433)
|+++|.. .+.++.++. ......+++++|||+|.+|+|+|..+.+.+.+|+++.|.+.. +|..
T Consensus 147 p~i~G~~--~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~------------ 211 (466)
T 3l8k_A 147 LRLPGVE--YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA-LITL------------ 211 (466)
T ss_dssp CCCTTGG--GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS-CTTS------------
T ss_pred CCCCCcc--ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC-CCCC------------
Confidence 9999821 233333322 111224689999999999999999999999999999988642 2211
Q ss_pred hchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC---Ce--EEec
Q psy2398 226 LGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG---NI--VHFV 300 (433)
Q Consensus 226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~---~~--v~~~ 300 (433)
+.. .+.+.+.+.+. + ++.....++++.. .. +.++
T Consensus 212 ----~d~-----~~~~~l~~~l~-------v-------------------------~i~~~~~v~~i~~~~~~~v~v~~~ 250 (466)
T 3l8k_A 212 ----EDQ-----DIVNTLLSILK-------L-------------------------NIKFNSPVTEVKKIKDDEYEVIYS 250 (466)
T ss_dssp ----CCH-----HHHHHHHHHHC-------C-------------------------CEECSCCEEEEEEEETTEEEEEEC
T ss_pred ----CCH-----HHHHHHHhcCE-------E-------------------------EEEECCEEEEEEEcCCCcEEEEEE
Confidence 011 11222111111 1 3444455666643 22 5666
Q ss_pred --CCc--eeeccEEEEccCCCCCCCC-CCcccccccCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHH
Q psy2398 301 --DDT--HIEVDTIIYATGYNRHFPF-IDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSY 375 (433)
Q Consensus 301 --dG~--~~~~D~vi~atG~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~ 375 (433)
||+ ++++|.||+|||++|+.++ ++..++..+.+++.++ ..+.++.|+||++|||+..+...+.|..||+.+|.+
T Consensus 251 ~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 329 (466)
T 3l8k_A 251 TKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVD-ETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANN 329 (466)
T ss_dssp CTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCC-TTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHH
T ss_pred ecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeEC-CCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHH
Confidence 676 7899999999999999884 4555555543445554 556789999999999998778888999999999999
Q ss_pred Hhhh
Q psy2398 376 IQAF 379 (433)
Q Consensus 376 i~g~ 379 (433)
|.|.
T Consensus 330 i~~~ 333 (466)
T 3l8k_A 330 IMAN 333 (466)
T ss_dssp HHTT
T ss_pred HhCC
Confidence 9975
No 27
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=8.1e-32 Score=265.41 Aligned_cols=356 Identities=16% Similarity=0.156 Sum_probs=208.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC--------------CeEEEccCCCCCCcccCCCCCCccccceEeecC--CCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI--------------NYDLYEMESDLGGVWNSQASCGRVYPSLHLISP--KFNTQ 69 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~--------------~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~--~~~~~ 69 (433)
+.+||+||||||+||++|.+|.+.|. ..+.+|+.+.++ |... .++++..++.+ +.+.+
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g----~~~p~~~~q~~fl~Dlvt 111 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSG----MLVPGSKMQISFIKDLAT 111 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGG----GCCTTCBCSSCGGGSSST
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCC----CCCCCccccccchhhhcc
Confidence 45799999999999999999987643 456677766654 6543 34566555543 22222
Q ss_pred CCC-----------------CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC--------CeEEEE
Q psy2398 70 VPD-----------------YPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE--------DIWEVE 124 (433)
Q Consensus 70 ~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~--------~~~~v~ 124 (433)
+.+ ++++.+...|+++.++.+|++.++++++. +++|+++|++|++.. +.|+|+
T Consensus 112 l~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~~~~~~~~~~V~ 189 (501)
T 4b63_A 112 LRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDPSSSVVDFFTVR 189 (501)
T ss_dssp TTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSSTTSSCBCEEEEE
T ss_pred ccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeeccccccccccccceEEEE
Confidence 221 11223344689999999999999999764 699999999999862 369999
Q ss_pred EccC-----cEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCCCC------CCCCCCCeEEEEcCCCCHHHHHHHHh
Q psy2398 125 LSNG-----KKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDYKS------PDQIRNKRVLVVGAGNSGCDIAVDAS 193 (433)
Q Consensus 125 ~~~g-----~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~~~------~~~~~~~~v~VvG~G~sg~d~a~~l~ 193 (433)
+.++ .++.++.||+|||. .|.+|...+ |.+.++|+..|.. ...++||+|+|||+|.||+|++.+|+
T Consensus 190 ~~~~~~g~~~~~~ar~vVlatG~--~P~iP~~~~-~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~ 266 (501)
T 4b63_A 190 SRNVETGEISARRTRKVVIAIGG--TAKMPSGLP-QDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQ 266 (501)
T ss_dssp EEETTTCCEEEEEEEEEEECCCC--EECCCTTSC-CCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHH
T ss_pred EecCCCceEEEEEeCEEEECcCC--CCCCCCCCC-CCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHH
Confidence 8764 25889999999997 788876654 6789999999875 45689999999999999999999998
Q ss_pred cc--CCcEEEEEecCceeecccCCCCCh-------hHHhHhhchhhcC---------------chHHHHHHHHHHH-Hhc
Q psy2398 194 HH--SEKVYHSTRRGYHYYPKFIDGKPT-------PQWMLQLGNKFSS---------------KEETMAYIKQVFK-LAG 248 (433)
Q Consensus 194 ~~--~~~V~~~~r~~~~~~p~~~~~~~~-------~~~~~~~p~~~~~---------------~~~~~~~~~~~~~-~~~ 248 (433)
+. +.+|+++.|++.++ |........ ..++..+|...+. ......+.+.+.+ .+.
T Consensus 267 ~~~~~~~v~~~~R~~~~~-p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~ 345 (501)
T 4b63_A 267 KRYPNSRTTLIMRDSAMR-PSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVK 345 (501)
T ss_dssp HHSTTCEEEEECSSSSCC-BCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCceEEEEeCCCccc-cccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccC
Confidence 75 78999999998653 332111110 0111112222111 0000011111110 111
Q ss_pred CCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEecCCceeeccEEEEccCCCCCCC-CCCcc-
Q psy2398 249 FDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFP-FIDKE- 326 (433)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~-~l~~~- 326 (433)
+ .... ...+.+...... .........+++.+...+.++++.++.+.||+++++|+||+||||+++.+ +|...
T Consensus 346 ~-~~~~---~~~~~l~~~~~v--~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~ 419 (501)
T 4b63_A 346 N-PDET---QWQHRILPERKI--TRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKV 419 (501)
T ss_dssp C-SCGG---GCSSEEECSEEE--EEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGG
T ss_pred C-Cccc---ccceeecCCcce--eeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchh
Confidence 1 0000 000001100000 01111223445555555667778889999999999999999999999864 33221
Q ss_pred -cccc-cCCcccccccc-------ccCCCCcEEEEcccccc----CChhhHHHHHHHHHHHHHhhh
Q psy2398 327 -KLEW-KLGIPDLFIHI-------APRNLDNIFFFGFVNAA----AGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 327 -~~~~-~~~~~~~~~~~-------~~~~~p~i~~iG~~~~~----~~~~~~a~~qa~~~a~~i~g~ 379 (433)
.+.. ..+.+.+..++ .....++||+.|.+... .+...+...-+..+++.|.|+
T Consensus 420 ~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~~~l~g~ 485 (501)
T 4b63_A 420 QHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQSIFGE 485 (501)
T ss_dssp GGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHH
T ss_pred hhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHHHHHhcc
Confidence 1122 22344443322 11235779999865421 122233222333456666664
No 28
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.6e-31 Score=264.76 Aligned_cols=284 Identities=16% Similarity=0.167 Sum_probs=209.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..+||+|||||++|+++|..|++.|++|+++|+ .+||.|..... . ..+... .+...
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~----~-----------~~~~~~-------~~~~~ 266 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVD----I-----------ENYISV-------PKTEG 266 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSC----B-----------CCBTTB-------SSBCH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccc----c-----------cccCCC-------CCCCH
Confidence 468999999999999999999999999999996 47888875410 0 001000 13457
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe---CCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCcee
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY---EDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEIL 160 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~---~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~ 160 (433)
.++.+++...++++++ .++++++|+.++++ ++.|.|++.+|.++.||+||+|||+ .|+.|+++| .+.+..+
T Consensus 267 ~~l~~~l~~~~~~~gv--~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~--~~~~~~ipG~~~~~~~~v 342 (521)
T 1hyu_A 267 QKLAGALKAHVSDYDV--DVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA--KWRNMNVPGEDQYRTKGV 342 (521)
T ss_dssp HHHHHHHHHHHHTSCE--EEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE--EECCCCCTTTTTTTTTTE
T ss_pred HHHHHHHHHHHHHcCC--EEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC--CcCCCCCCChhhhcCceE
Confidence 7889999999998887 58889999999864 3479999988888999999999998 678888888 5555555
Q ss_pred ccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 161 HSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 161 ~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
+.........+.+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+... . .+.
T Consensus 343 ~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~----------------~---------~l~ 397 (521)
T 1hyu_A 343 TYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD----------------Q---------VLQ 397 (521)
T ss_dssp ECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSC----------------H---------HHH
T ss_pred EEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcC----------------H---------HHH
Confidence 655554444567999999999999999999999999999999987643100 0 111
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccC-CCeee--cCCceeeeCC-----eEEecC---Cc--eeec
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGH-GDILP--KDDIKNLNGN-----IVHFVD---DT--HIEV 307 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~--~~~v~~~~~~-----~v~~~d---G~--~~~~ 307 (433)
+. + .. .+|++ ...++++.+. ++.+.+ |+ ++++
T Consensus 398 ~~----l-------------------------------~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~ 442 (521)
T 1hyu_A 398 DK----V-------------------------------RSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVAL 442 (521)
T ss_dssp HH----H-------------------------------TTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEEC
T ss_pred HH----H-------------------------------hcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEc
Confidence 11 1 11 13333 3345555432 356654 54 5899
Q ss_pred cEEEEccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHhhh
Q psy2398 308 DTIIYATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 308 D~vi~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~g~ 379 (433)
|.||+|+|++|+.++++.. +.. ..+++.++.. +.++.|+||++|||+..+ ..+..|..||+.+|..+...
T Consensus 443 D~vi~a~G~~pn~~~l~~~-l~~~~~G~I~Vd~~-~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 514 (521)
T 1hyu_A 443 AGIFVQIGLLPNTHWLEGA-LERNRMGEIIIDAK-CETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDY 514 (521)
T ss_dssp SEEEECCCEEESCGGGTTT-SCBCTTSCBCCCTT-CBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECcCCCCCchHHhhh-hccCCCCcEEeCCC-CCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHH
Confidence 9999999999999998753 444 3455666554 468999999999998754 45678888999888877653
No 29
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-32 Score=264.69 Aligned_cols=290 Identities=14% Similarity=0.160 Sum_probs=194.8
Q ss_pred CcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
+||+|||||++|+++|..|++. |.+|+|||+++.+|...... ..+.. .. ....
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~----~~~~~------~~---------------~~~~ 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGL----SAYFN------HT---------------INEL 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccc----hhhhc------CC---------------CCCH
Confidence 6999999999999999999998 89999999998765211000 00000 00 0000
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-cCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-NGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMD 164 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~ 164 (433)
.++..+......++++ .++++++|+.++.+.+.+.+... ++.++.||+||+|||+ .|..|+++|.....+++...
T Consensus 58 ~~~~~~~~~~~~~~gi--~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~--~p~~p~i~g~~~~~v~~~~~ 133 (452)
T 3oc4_A 58 HEARYITEEELRRQKI--QLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA--SQFSTQIRGSQTEKLLKYKF 133 (452)
T ss_dssp ---CCCCHHHHHHTTE--EEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC--CBCCCCCBTTTCTTEEEGGG
T ss_pred HHhhcCCHHHHHHCCC--EEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc--ccCCCCCCCCCCCCEEEeCC
Confidence 1111112233455666 47789999999887787777522 3456899999999999 88999999832334555544
Q ss_pred CCCCCC-----CCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHH
Q psy2398 165 YKSPDQ-----IRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAY 239 (433)
Q Consensus 165 ~~~~~~-----~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (433)
+.+... ..+++++|||+|.+|+|+|..+.+.+.+|+++.|.+.. +|+. +.. .+
T Consensus 134 ~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~~~----------------~d~-----~~ 191 (452)
T 3oc4_A 134 LSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL-LPKY----------------FDK-----EM 191 (452)
T ss_dssp CC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS-STTT----------------CCH-----HH
T ss_pred HHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc-cccc----------------CCH-----HH
Confidence 433322 25789999999999999999999999999999988752 2211 111 11
Q ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee--CCe--EEecCCceeeccEEEEccC
Q psy2398 240 IKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN--GNI--VHFVDDTHIEVDTIIYATG 315 (433)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~--~~~--v~~~dG~~~~~D~vi~atG 315 (433)
.+.+.+.+.. .++ ++.....|+++. +.. |.+++| ++++|.||+|||
T Consensus 192 ~~~l~~~l~~----~GV-------------------------~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G 241 (452)
T 3oc4_A 192 VAEVQKSLEK----QAV-------------------------IFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALN 241 (452)
T ss_dssp HHHHHHHHHT----TTE-------------------------EEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSC
T ss_pred HHHHHHHHHH----cCC-------------------------EEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcC
Confidence 1111111110 111 233456677765 222 556666 899999999999
Q ss_pred CCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEccccccC----------ChhhHHHHHHHHHHHHHhhhh
Q psy2398 316 YNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAA----------GLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 316 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~----------~~~~~a~~qa~~~a~~i~g~~ 380 (433)
++|+.++++.. +.. .++++.+++ .+.++.|+||++|||+..+ ..++.|..||+.+|.+|.|..
T Consensus 242 ~~p~~~~l~~~-~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 242 LHPQLAYLDKK-IQRNLDQTIAVDA-YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp CBCCCSSCCTT-SCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred CCCChHHHHhh-hccCCCCCEEECc-CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 99999988754 444 345566665 4578999999999998642 467889999999999998864
No 30
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=8.1e-33 Score=266.61 Aligned_cols=288 Identities=17% Similarity=0.160 Sum_probs=195.8
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCC--eEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNIN--YDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~--v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++|+|||||++|+++|..|++.|.+ |++||+.+..+... +.+ ++..... ... +... ...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~----------~~l----~~~~~~g-~~~-~~~~--~~~- 63 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR----------PSL----SKAVLDG-SLE-RPPI--LAE- 63 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS----------GGG----GTHHHHT-SSS-SCCB--SSC-
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC----------ccc----cHHHhCC-CCC-HHHh--cCC-
Confidence 5999999999999999999999987 99999987653110 000 0000000 000 0000 000
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDY 165 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~ 165 (433)
.++.++.++ +++++++|+.++.+. +.|++.++.++.||+||+|||+ .|..|+++|.-...+.+....
T Consensus 64 -------~~~~~~~~i--~~~~~~~v~~id~~~--~~v~~~~g~~~~~d~lvlAtG~--~p~~~~ipG~~~~~v~~~~~~ 130 (410)
T 3ef6_A 64 -------ADWYGEARI--DMLTGPEVTALDVQT--RTISLDDGTTLSADAIVIATGS--RARTMALPGSQLPGVVTLRTY 130 (410)
T ss_dssp -------TTHHHHTTC--EEEESCCEEEEETTT--TEEEETTSCEEECSEEEECCCE--EECCCCCTTTTSTTEECCCSH
T ss_pred -------HHHHHHCCC--EEEeCCEEEEEECCC--CEEEECCCCEEECCEEEEccCC--cccCCCCCCccccceEEeccH
Confidence 122345566 588899999998643 4778888888999999999998 789999998222233332222
Q ss_pred CCC-----CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 166 KSP-----DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 166 ~~~-----~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
.+. ....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.++ ++. ++..+.. .+.
T Consensus 131 ~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-~~~------------~~~~~~~-----~l~ 192 (410)
T 3ef6_A 131 GDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-VRV------------LGRRIGA-----WLR 192 (410)
T ss_dssp HHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-HHH------------HCHHHHH-----HHH
T ss_pred HHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-hhh------------cCHHHHH-----HHH
Confidence 111 11247899999999999999999999999999999887532 110 1111111 111
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEEecCCceeeccEEEEccCC
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVHFVDDTHIEVDTIIYATGY 316 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~~~dG~~~~~D~vi~atG~ 316 (433)
+.+. ..++ ++.....|+++.+. .|.++||+++++|.||+|||+
T Consensus 193 ~~l~--------~~GV-------------------------~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 193 GLLT--------ELGV-------------------------QVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHHH--------HHTC-------------------------EEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred HHHH--------HCCC-------------------------EEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 1111 0111 33345567777643 688999999999999999999
Q ss_pred CCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC---------hhhHHHHHHHHHHHHHhhhh
Q psy2398 317 NRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG---------LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~---------~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|+.++++...+..+ +++.++. .+.++.|+||++|||+..+. .+..|..||+.+|.+|.|+.
T Consensus 240 ~p~~~l~~~~gl~~~-~gi~vd~-~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 240 EPADQLARQAGLACD-RGVIVDH-CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp EECCHHHHHTTCCBS-SSEECCT-TSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred eecHHHHHhCCCccC-CeEEEcc-CeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 999988876666665 4455554 44789999999999986432 36899999999999999874
No 31
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=8.6e-32 Score=249.36 Aligned_cols=284 Identities=13% Similarity=0.142 Sum_probs=193.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+.+||+||||||+|++||.+|++.|++|+|||+. ..||.+..+ |+ .++.. ....
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~------~~--------------~~~~~----~~~~ 58 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQN------SH--------------GFITR----DGIK 58 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSC------BC--------------CSTTC----TTBC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeee------cC--------------CccCC----CCCC
Confidence 35699999999999999999999999999999986 456655433 11 11100 1234
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceec
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILH 161 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~ 161 (433)
..++.+...+.+.+++. ...+...+..+... .+.+++.+.++.++.||+||+|||+ .|+.|++|| .+.+..++
T Consensus 59 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs--~p~~p~i~G~~~~~~~~v~ 134 (304)
T 4fk1_A 59 PEEFKEIGLNEVMKYPS--VHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM--QEEFPSIPNVREYYGKSLF 134 (304)
T ss_dssp HHHHHHHHHHHHTTSTT--EEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC--EEECCSCTTHHHHBTTTEE
T ss_pred HHHHHHHHHHHHHhcCC--EEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC--ccccccccCccccccceee
Confidence 56666666666666553 23344556666554 6778999999999999999999998 899999999 45555455
Q ss_pred cCCCCCCCCCCCCeEEEEcCCCC-HHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHH
Q psy2398 162 SMDYKSPDQIRNKRVLVVGAGNS-GCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYI 240 (433)
Q Consensus 162 ~~~~~~~~~~~~~~v~VvG~G~s-g~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (433)
.........+++++++|||+|.. +.|+|..+...+.+|+++.+.... . . ...
T Consensus 135 ~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~-~-----------------~---------~~~ 187 (304)
T 4fk1_A 135 SCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL-S-----------------Q---------TIM 187 (304)
T ss_dssp SCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC-C-----------------H---------HHH
T ss_pred eccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc-h-----------------h---------hhh
Confidence 44444445567888999998865 568888888889999988776421 0 0 111
Q ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee-----CCeEEecCCceeeccEEEEccC
Q psy2398 241 KQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN-----GNIVHFVDDTHIEVDTIIYATG 315 (433)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~-----~~~v~~~dG~~~~~D~vi~atG 315 (433)
+.+. . .++ .+ ....++.+. -..|.++||+++++|.+|+++|
T Consensus 188 ~~l~----~----~g~-------------------------~~-~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 188 DELS----N----KNI-------------------------PV-ITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPT 233 (304)
T ss_dssp HHHH----T----TTC-------------------------CE-ECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCE
T ss_pred hhhh----c----cce-------------------------eE-eeeeEEEeecCCCeeeeeeccccceeeecceeeeec
Confidence 1111 0 000 01 111233332 1457889999999999988888
Q ss_pred CCCCCCCCCcccccccC-CccccccccccCCCCcEEEEccccccC-ChhhHHHHHHHHHHHHHhhh
Q psy2398 316 YNRHFPFIDKEKLEWKL-GIPDLFIHIAPRNLDNIFFFGFVNAAA-GLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 316 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~p~i~~iG~~~~~~-~~~~~a~~qa~~~a~~i~g~ 379 (433)
.+++..++....++.+. +++.+++ .+.|+.|+|||+|||+..+ ..+..|..|++.+|..+...
T Consensus 234 ~~~~~~~~~~~g~~~~~~G~I~vd~-~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~ 298 (304)
T 4fk1_A 234 FFRPNQFIEQLGCELQSNGTFVIDD-FGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSD 298 (304)
T ss_dssp EECSSCHHHHTTCCCCTTSSSCSST-TCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCChhhhhcCeEECCCCCEEECc-CCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 88877777766666543 4465554 5589999999999998643 44667888888888777543
No 32
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.8e-32 Score=270.15 Aligned_cols=290 Identities=14% Similarity=0.194 Sum_probs=193.6
Q ss_pred CcEEEECCChHHHHHHHHHHhcC---CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN---INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g---~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
+||+|||||++|+++|..|++.| .+|+|||+.+.++..+.. .+ ......... +..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~---~~~~~~~~~------~~~------ 93 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MA---LWIGEQIAG------PEG------ 93 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HH---HHHTTSSSC------SGG------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cc---hhhcCccCC------HHH------
Confidence 79999999999999999999988 999999998765422110 00 000000000 000
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-cCcEEEeCEEEEccCCCCCCCCCCCCC-C-------C
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-NGKKKKYDFIAVCNGAQRVARYPNYSG-Y-------F 155 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~g~~~~~d~vIvAtG~~s~p~~p~i~g-~-------~ 155 (433)
+.....+.++++++ .++++++|+.++.+.+.+.+... ++.++.||+||+|||+ .|..|+++| . |
T Consensus 94 ---~~~~~~~~~~~~gv--~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~--~p~~p~i~G~~~~~~~~~f 166 (490)
T 2bc0_A 94 ---LFYSDKEELESLGA--KVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS--QPILPPIKGAEIKEGSLEF 166 (490)
T ss_dssp ---GBSCCHHHHHHTTC--EEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE--EECCCSCBTCCBCTTCTTC
T ss_pred ---hhhcCHHHHHhCCC--EEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC--CcCCCCCCCcccccccccc
Confidence 00011233445676 47789999999876676666521 2346899999999997 888898888 3 1
Q ss_pred ---CCceeccCCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHh
Q psy2398 156 ---SGEILHSMDYKSPD-------QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQ 225 (433)
Q Consensus 156 ---~g~~~~~~~~~~~~-------~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 225 (433)
...+++...+.+.. ...+++|+|||+|.+|+|+|..|++.+.+|+++.|++.. +|+.
T Consensus 167 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-l~~~------------ 233 (490)
T 2bc0_A 167 EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC-LAGY------------ 233 (490)
T ss_dssp CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST-TTTT------------
T ss_pred ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch-hhhH------------
Confidence 12344433222111 145899999999999999999999999999999988642 2211
Q ss_pred hchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEEecC
Q psy2398 226 LGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVHFVD 301 (433)
Q Consensus 226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~~~d 301 (433)
+.. .+.+.+.+.+. ..++ ++.....|+++.+. .+.+ |
T Consensus 234 ----~~~-----~~~~~l~~~l~----~~GV-------------------------~i~~~~~v~~i~~~~~v~~v~~-~ 274 (490)
T 2bc0_A 234 ----YDR-----DLTDLMAKNME----EHGI-------------------------QLAFGETVKEVAGNGKVEKIIT-D 274 (490)
T ss_dssp ----SCH-----HHHHHHHHHHH----TTTC-------------------------EEEETCCEEEEECSSSCCEEEE-S
T ss_pred ----HHH-----HHHHHHHHHHH----hCCe-------------------------EEEeCCEEEEEEcCCcEEEEEE-C
Confidence 111 11111111111 1111 33345566666542 2444 7
Q ss_pred CceeeccEEEEccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHH
Q psy2398 302 DTHIEVDTIIYATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQ 370 (433)
Q Consensus 302 G~~~~~D~vi~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~ 370 (433)
|+++++|.||+|||++|+.++++.. +.. .++++.+++. +.++.|+||++|||+.. ...+..|..||+
T Consensus 275 g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~-~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~ 352 (490)
T 2bc0_A 275 KNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKR-QETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGI 352 (490)
T ss_dssp SCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTT-CBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHH
T ss_pred CcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCC-cccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHH
Confidence 8889999999999999999988755 554 3455666654 57899999999999863 246788999999
Q ss_pred HHHHHHhhhh
Q psy2398 371 FIRSYIQAFI 380 (433)
Q Consensus 371 ~~a~~i~g~~ 380 (433)
.+|.+|.|..
T Consensus 353 ~aa~~i~g~~ 362 (490)
T 2bc0_A 353 VAAHNACGTD 362 (490)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHhcCCC
Confidence 9999999864
No 33
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.98 E-value=2.1e-32 Score=271.53 Aligned_cols=310 Identities=15% Similarity=0.128 Sum_probs=208.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCC-CCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYP-MPDNY 79 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~ 79 (433)
..++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|.+.. |.+...+.... .+..+..+. ++...
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g----~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 116 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNA----CVPHHLFSDCAAELMLARTFSGQYWFPDMT 116 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHS----HHHHHHHHHHHHHHHHHHHTTTSTTCCCCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccC----cCchHHHHHHHHHHHHHhhhhhcCcHHHHH
Confidence 3468999999999999999999999999999999988999987542 12211111000 000011111 12222
Q ss_pred CCCCCHHHHHHHHHH-------HH-----HHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 80 PVYPNHSMMLDYLRS-------YA-----KKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 80 ~~~~~~~~~~~~l~~-------~~-----~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
..+++..++.+++.. +. ++.++ .+.++.++..++. . .|.+. +..+.||+||+|||+ .|.
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--~--~v~~~-g~~~~~d~lViATGs--~p~ 187 (523)
T 1mo9_A 117 EKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--H--TVEAA-GKVFKAKNLILAVGA--GPG 187 (523)
T ss_dssp TCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--T--EEEET-TEEEEBSCEEECCCE--ECC
T ss_pred hhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--C--EEEEC-CEEEEeCEEEECCCC--CCC
Confidence 233446677666643 33 55566 3555667777653 3 45554 567999999999998 889
Q ss_pred CCCCCCCCCCceeccCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhh
Q psy2398 148 YPNYSGYFSGEILHSMDYK-SPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQL 226 (433)
Q Consensus 148 ~p~i~g~~~g~~~~~~~~~-~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 226 (433)
.|+++|.....++++.++. ......+++++|||+|.+|+|+|..+.+.+.+|+++.+.+. ++|..
T Consensus 188 ~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~-~l~~~------------- 253 (523)
T 1mo9_A 188 TLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP-LKLIK------------- 253 (523)
T ss_dssp CCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT-TTTCC-------------
T ss_pred CCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc-ccccc-------------
Confidence 9999982222355555444 34444559999999999999999999999999999998864 22211
Q ss_pred chhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C------eEE
Q psy2398 227 GNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N------IVH 298 (433)
Q Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~------~v~ 298 (433)
+..+.. .+.+. +. ..++ ++.....|+++.. . .|.
T Consensus 254 ~~~~~~-----~l~~~----l~----~~GV-------------------------~i~~~~~V~~i~~~~~~~v~~~~v~ 295 (523)
T 1mo9_A 254 DNETRA-----YVLDR----MK----EQGM-------------------------EIISGSNVTRIEEDANGRVQAVVAM 295 (523)
T ss_dssp SHHHHH-----HHHHH----HH----HTTC-------------------------EEESSCEEEEEEECTTSBEEEEEEE
T ss_pred cHHHHH-----HHHHH----HH----hCCc-------------------------EEEECCEEEEEEEcCCCceEEEEEE
Confidence 111111 11111 11 1111 2333445555532 2 366
Q ss_pred ecCCc-eeeccEEEEccCCCCCCC-CCCccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHH
Q psy2398 299 FVDDT-HIEVDTIIYATGYNRHFP-FIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSY 375 (433)
Q Consensus 299 ~~dG~-~~~~D~vi~atG~~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~ 375 (433)
+++|+ ++++|.||+|||++|+.+ +++..++..+ .+++.+++. +.++.|+||++|||+..+...+.|..||+.+|.+
T Consensus 296 ~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~ 374 (523)
T 1mo9_A 296 TPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEY-LQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARN 374 (523)
T ss_dssp ETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTT-SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHH
T ss_pred ECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCC-CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHH
Confidence 77887 899999999999999988 6776566553 455666654 5789999999999998777888999999999999
Q ss_pred Hhhhh
Q psy2398 376 IQAFI 380 (433)
Q Consensus 376 i~g~~ 380 (433)
+.|..
T Consensus 375 i~g~~ 379 (523)
T 1mo9_A 375 VMGEK 379 (523)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 99853
No 34
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.98 E-value=3.1e-32 Score=264.17 Aligned_cols=294 Identities=16% Similarity=0.172 Sum_probs=199.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++|+|||||++|++||..|+++| .+|+|||+.+..++... +.+... .... ..........
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-------~l~~~~---~~~~--------~~~~~~~~~~ 62 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-------ALPYVI---GEVV--------EDRRYALAYT 62 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-------GHHHHH---TTSS--------CCGGGTBCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-------hhHHHH---cCCc--------cchhhhhhcC
Confidence 47999999999999999999987 47999999875432100 011000 0000 0000001111
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc---CcEEEeCEEEEccCCCCCCCCCCCCC--CCCCcee
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN---GKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEIL 160 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~ 160 (433)
. ..+.++.++ .++.+++|+.++.......+.... +..+.||+||+|||+ .|+.|+++| .+..+.+
T Consensus 63 ~------~~~~~~~~i--~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs--~p~~p~i~g~~~~~~~~~ 132 (437)
T 4eqs_A 63 P------EKFYDRKQI--TVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA--SANSLGFESDITFTLRNL 132 (437)
T ss_dssp H------HHHHHHHCC--EEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE--EECCCCCCCTTEECCSSH
T ss_pred H------HHHHHhcCC--EEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC--ccccccccCceEEeeccH
Confidence 1 233455677 478899999998766666665443 235889999999998 889999988 2222111
Q ss_pred ccCCC-CCC-CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHH
Q psy2398 161 HSMDY-KSP-DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMA 238 (433)
Q Consensus 161 ~~~~~-~~~-~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~ 238 (433)
..... ... ....+++++|||+|.+|+|+|..+.+.+.+||+++|.+. ++|.. +..+.. .
T Consensus 133 ~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~-ll~~~-------------d~~~~~-----~ 193 (437)
T 4eqs_A 133 EDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK-INKLM-------------DADMNQ-----P 193 (437)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC-CSTTS-------------CGGGGH-----H
T ss_pred HHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecc-ccccc-------------cchhHH-----H
Confidence 11000 000 012367999999999999999999999999999998875 22321 111111 2
Q ss_pred HHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEecCCceeeccEEEEccCCCC
Q psy2398 239 YIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNR 318 (433)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~ 318 (433)
+.+.+. ..++ ++.....|+++++..+.+++|+++++|.||+|+|++|
T Consensus 194 ~~~~l~--------~~gV-------------------------~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 194 ILDELD--------KREI-------------------------PYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp HHHHHH--------HTTC-------------------------CEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHhh--------ccce-------------------------EEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceec
Confidence 222211 1122 4556778899999999999999999999999999999
Q ss_pred CCCCCCcccccccC-CccccccccccCCCCcEEEEccccccC----------ChhhHHHHHHHHHHHHHhhhhcC
Q psy2398 319 HFPFIDKEKLEWKL-GIPDLFIHIAPRNLDNIFFFGFVNAAA----------GLGDGLRLQGQFIRSYIQAFIRK 382 (433)
Q Consensus 319 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~p~i~~iG~~~~~~----------~~~~~a~~qa~~~a~~i~g~~~l 382 (433)
+..+++..++..+. +++.+++ .+.|+.||||++|||+..+ ..++.|..||+.+|++|.|....
T Consensus 241 n~~~~~~~gl~~~~~G~I~vd~-~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~ 314 (437)
T 4eqs_A 241 NSKFIESSNIKLDRKGFIPVND-KFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTI 314 (437)
T ss_dssp SCGGGTTSSCCCCTTSCEECCT-TCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTC
T ss_pred CcHHHHhhhhhhccCCcEecCC-CccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 99999877776643 4565554 5578999999999998532 35778999999999999987543
No 35
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.98 E-value=6.8e-33 Score=266.86 Aligned_cols=292 Identities=14% Similarity=0.128 Sum_probs=195.0
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDN 78 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (433)
|+.+..++||+|||||++|+++|..|++.|. +|++||+.+.++. ..+ ..+ +.+..- .. +..
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~----~~~---~~~-------~~~~~~-~~--~~~ 63 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY----DRP---PLS-------KDFMAH-GD--AEK 63 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB----CSG---GGG-------THHHHH-CC--GGG
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc----cCC---CCC-------HHHhCC-Cc--hhh
Confidence 4433456899999999999999999999988 5999999875421 100 000 000000 00 000
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCC-CCCCCC
Q psy2398 79 YPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNY-SGYFSG 157 (433)
Q Consensus 79 ~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i-~g~~~g 157 (433)
. +++ .++++++ .++++++|+.++.+ .++|++.++.++.||+||+|||+ .|..|++ +|.. .
T Consensus 64 --~---------~~~-~~~~~~v--~~~~~~~v~~i~~~--~~~v~~~~g~~~~~d~lviAtG~--~~~~~~i~~G~~-~ 124 (408)
T 2gqw_A 64 --I---------RLD-CKRAPEV--EWLLGVTAQSFDPQ--AHTVALSDGRTLPYGTLVLATGA--APRALPTLQGAT-M 124 (408)
T ss_dssp --S---------BCC-CTTSCSC--EEEETCCEEEEETT--TTEEEETTSCEEECSEEEECCCE--EECCCGGGTTCS-S
T ss_pred --h---------hHH-HHHHCCC--EEEcCCEEEEEECC--CCEEEECCCCEEECCEEEECCCC--CCCCCCccCCCC-C
Confidence 0 000 1233455 57788889998763 45788888888999999999998 8888888 8822 2
Q ss_pred ceeccCCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcC
Q psy2398 158 EILHSMDYKSP-----DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSS 232 (433)
Q Consensus 158 ~~~~~~~~~~~-----~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~ 232 (433)
.+.+.....+. ....+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+. ++|+. ++..+..
T Consensus 125 ~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-~l~~~------------~~~~~~~ 191 (408)
T 2gqw_A 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR-LMSRA------------APATLAD 191 (408)
T ss_dssp CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS-SSTTT------------SCHHHHH
T ss_pred cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc-ccccc------------cCHHHHH
Confidence 23332221111 112478999999999999999999999999999998864 22211 0111111
Q ss_pred chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEecCCceeeccEEEE
Q psy2398 233 KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFVDDTHIEVDTIIY 312 (433)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~dG~~~~~D~vi~ 312 (433)
.+.+.+. ..++ ++.....++++.+..|.++||+++++|.||+
T Consensus 192 -----~l~~~l~--------~~GV-------------------------~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~ 233 (408)
T 2gqw_A 192 -----FVARYHA--------AQGV-------------------------DLRFERSVTGSVDGVVLLDDGTRIAADMVVV 233 (408)
T ss_dssp -----HHHHHHH--------HTTC-------------------------EEEESCCEEEEETTEEEETTSCEEECSEEEE
T ss_pred -----HHHHHHH--------HcCc-------------------------EEEeCCEEEEEECCEEEECCCCEEEcCEEEE
Confidence 1111111 1112 3444566777764478899999999999999
Q ss_pred ccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC----------hhhHHHHHHHHHHHHHhhhhc
Q psy2398 313 ATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG----------LGDGLRLQGQFIRSYIQAFIR 381 (433)
Q Consensus 313 atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~----------~~~~a~~qa~~~a~~i~g~~~ 381 (433)
|+|++|+.++++...+..++ ++.++. .+.++.|+||++|||+..+. .+..|..||+.+|.+|.|...
T Consensus 234 a~G~~p~~~l~~~~gl~~~~-gi~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~ 310 (408)
T 2gqw_A 234 GIGVLANDALARAAGLACDD-GIFVDA-YGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA 310 (408)
T ss_dssp CSCEEECCHHHHHHTCCBSS-SEECCT-TCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS
T ss_pred CcCCCccHHHHHhCCCCCCC-CEEECC-CCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC
Confidence 99999998888765565554 466655 45789999999999986431 467899999999999998654
No 36
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=2.2e-33 Score=266.22 Aligned_cols=280 Identities=15% Similarity=0.171 Sum_probs=192.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..||+|||||++|+++|..|++.| +|+|||+.+..+ +... ..+.. +.. .....
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~-----~l~~~-------~~g------------~~~~~ 60 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKP-----MLSHY-------IAG------------FIPRN 60 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCST-----THHHH-------HTT------------SSCGG
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccc-----hhHHH-------HhC------------CCCHH
Confidence 369999999999999999999999 999999986432 1100 01000 000 00011
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDYK 166 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~~ 166 (433)
++..+..++.++.++ .++++++|+.++++ .+.|+ .++.++.||+||+|||+ .|..|+++| ...+++.....
T Consensus 61 ~~~~~~~~~~~~~~v--~~~~g~~v~~id~~--~~~V~-~~g~~~~~d~lViATGs--~p~~p~i~G--~~~v~~~~~~~ 131 (367)
T 1xhc_A 61 RLFPYSLDWYRKRGI--EIRLAEEAKLIDRG--RKVVI-TEKGEVPYDTLVLATGA--RAREPQIKG--KEYLLTLRTIF 131 (367)
T ss_dssp GGCSSCHHHHHHHTE--EEECSCCEEEEETT--TTEEE-ESSCEEECSEEEECCCE--EECCCCSBT--GGGEECCCSHH
T ss_pred HhccCCHHHHHhCCc--EEEECCEEEEEECC--CCEEE-ECCcEEECCEEEECCCC--CCCCCCCCC--cCCEEEEcCHH
Confidence 111112233455666 47778889888763 35566 56778999999999998 889999988 22344433332
Q ss_pred CCCCC-----CCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHH
Q psy2398 167 SPDQI-----RNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIK 241 (433)
Q Consensus 167 ~~~~~-----~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (433)
+...+ ++++++|||+|.+|+|+|..|++.+.+|+++.|.+.. +| . +..+.. .+.+
T Consensus 132 ~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~-~-------------~~~~~~-----~l~~ 191 (367)
T 1xhc_A 132 DADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF-LG-L-------------DEELSN-----MIKD 191 (367)
T ss_dssp HHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC-TT-C-------------CHHHHH-----HHHH
T ss_pred HHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee-cc-C-------------CHHHHH-----HHHH
Confidence 22111 3589999999999999999999999999999988642 22 1 011111 1111
Q ss_pred HHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeCCeEEecCCceeeccEEEEccCCCCC
Q psy2398 242 QVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRH 319 (433)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~ 319 (433)
.+ ....|+ ....+++++...+.++||+ +++|.||+|+|++|+
T Consensus 192 ~l-----------------------------------~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 192 ML-----------------------------------EETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HH-----------------------------------HHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEEC
T ss_pred HH-----------------------------------HHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcC
Confidence 11 111343 3556778877789999998 999999999999999
Q ss_pred CCCCCcccccccCCccccccccccCCCCcEEEEcccccc----CChhhHHHHHHHHHHHHHhhhh
Q psy2398 320 FPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAA----AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~----~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
.++++...+..++ ++.+++ .+.++.|+||++|||+.. +..++.|..||+.+|.++.|..
T Consensus 236 ~~ll~~~gl~~~~-gi~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 298 (367)
T 1xhc_A 236 VDLARRSGIHTGR-GILIDD-NFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEP 298 (367)
T ss_dssp CHHHHHTTCCBSS-SEECCT-TSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCCCC-CEEECC-CcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCC
Confidence 8877765565543 455554 457889999999999743 3467899999999999999853
No 37
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.98 E-value=1.5e-31 Score=261.01 Aligned_cols=288 Identities=17% Similarity=0.219 Sum_probs=192.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++||+|||||++|+++|..|++. +.+|+|||+.+.+++.... . |........
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~-------~-------------------p~~~~~~~~ 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG-------I-------------------PYVVEGLST 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC-------C-------------------ccccCCCCC
Confidence 47999999999999999999998 7899999998765421110 0 000001111
Q ss_pred HHHHHHHH-HHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC-cEEEeCEEEEccCCCCCCCCCCCCC-CCCCceec
Q psy2398 85 HSMMLDYL-RSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG-KKKKYDFIAVCNGAQRVARYPNYSG-YFSGEILH 161 (433)
Q Consensus 85 ~~~~~~~l-~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g-~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~~ 161 (433)
..++..+. ..+.+++++ .++++++|+.++. +.+.+.+.++ .++.||+||+|||+ .|..|+++| ...+ ++.
T Consensus 57 ~~~~~~~~~~~~~~~~gi--~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG~--~p~~p~i~G~~~~~-v~~ 129 (449)
T 3kd9_A 57 PDKLMYYPPEVFIKKRGI--DLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANGA--SPQVPAIEGVNLKG-VFT 129 (449)
T ss_dssp ---------CTHHHHTTC--EEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCCE--EECCCSCBTTTSTT-EEC
T ss_pred HHHhhhcCHHHHHHhcCc--EEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCCC--CCCCCCCCCCCCCC-EEE
Confidence 22222222 334467787 5888999988864 5677877776 37899999999998 889999988 3222 222
Q ss_pred cCCCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCch
Q psy2398 162 SMDYKS-------PDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKE 234 (433)
Q Consensus 162 ~~~~~~-------~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~ 234 (433)
.....+ ...+.+++++|||+|.+|+|+|..+.+.+.+|+++.|++.. +++ .+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~~----------------~~~~-- 190 (449)
T 3kd9_A 130 ADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV-LRR----------------SFDK-- 190 (449)
T ss_dssp SCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST-TTT----------------TSCH--
T ss_pred eCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc-chh----------------hcCH--
Confidence 211111 11236889999999999999999999999999999988742 221 0111
Q ss_pred HHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC---eEEecCCceeeccEEE
Q psy2398 235 ETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN---IVHFVDDTHIEVDTII 311 (433)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~---~v~~~dG~~~~~D~vi 311 (433)
.+.+.+.+.+... + ++.....+.++.+. ...+.+|.++++|.||
T Consensus 191 ---~~~~~l~~~l~~~-----v-------------------------~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv 237 (449)
T 3kd9_A 191 ---EVTDILEEKLKKH-----V-------------------------NLRLQEITMKIEGEERVEKVVTDAGEYKAELVI 237 (449)
T ss_dssp ---HHHHHHHHHHTTT-----S-------------------------EEEESCCEEEEECSSSCCEEEETTEEEECSEEE
T ss_pred ---HHHHHHHHHHHhC-----c-------------------------EEEeCCeEEEEeccCcEEEEEeCCCEEECCEEE
Confidence 1111111111111 1 33445566666543 2356788889999999
Q ss_pred EccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHHHHHHHHhhhh
Q psy2398 312 YATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 312 ~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|||++|+.++++..++..+ .+++.+++ .+.++.|+||++|||+.. ..+++.|..||+.+|.++.|..
T Consensus 238 ~a~G~~p~~~l~~~~gl~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 238 LATGIKPNIELAKQLGVRIGETGAIWTNE-KMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp ECSCEEECCHHHHHTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred EeeCCccCHHHHHhCCccCCCCCCEEECC-CCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 99999999888775555553 34566655 457899999999999741 2467889999999999999864
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=4e-32 Score=266.86 Aligned_cols=310 Identities=17% Similarity=0.159 Sum_probs=203.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----Cccc-CCCCCCC--C
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQ-VPDYPMP--D 77 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~--~ 77 (433)
+.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... +.++..+.... .+.. +..+..+ .
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g----~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~ 79 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVG----CIPSKALLHSSHMYHEAKHSFANHGVKVSN 79 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHS----HHHHHHHHHHHHHHHHHHHTHHHHTEEESC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcC----ccchHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4568999999999999999999999999999999989999987542 12211100000 0000 0000000 0
Q ss_pred ---CCCCCC-CHH----HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCC
Q psy2398 78 ---NYPVYP-NHS----MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 78 ---~~~~~~-~~~----~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~ 147 (433)
.+..+. ... .+.+.+...+++.++ .+.+++.+. + +.+.+.|.+.+| .++.||+||+|||+ .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs--~p~ 152 (470)
T 1dxl_A 80 VEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGS--DVK 152 (470)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCE--EEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCC--CCC
Confidence 000000 011 123334555666677 477776543 3 457788877776 67999999999998 788
Q ss_pred CCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhc
Q psy2398 148 YPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLG 227 (433)
Q Consensus 148 ~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p 227 (433)
.|+++|.....++++.+...... .+++++|||+|.+|+|+|..|.+.+.+|+++.+.+.. +|.. +
T Consensus 153 ~p~~~g~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~-l~~~-------------~ 217 (470)
T 1dxl_A 153 SLPGVTIDEKKIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI-VPTM-------------D 217 (470)
T ss_dssp CBTTBCCCSSSEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS-STTS-------------C
T ss_pred CCCCCCCCcccEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc-cccc-------------c
Confidence 88888721123555555444333 4689999999999999999999999999999988642 2211 1
Q ss_pred hhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEEec---
Q psy2398 228 NKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVHFV--- 300 (433)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~~~--- 300 (433)
.. +.+.+.+.+. ..++ ++.....+.++... .+.+.
T Consensus 218 ~~---------~~~~l~~~l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~~~ 259 (470)
T 1dxl_A 218 AE---------IRKQFQRSLE----KQGM-------------------------KFKLKTKVVGVDTSGDGVKLTVEPSA 259 (470)
T ss_dssp HH---------HHHHHHHHHH----HSSC-------------------------CEECSEEEEEEECSSSSEEEEEEESS
T ss_pred HH---------HHHHHHHHHH----HcCC-------------------------EEEeCCEEEEEEEcCCeEEEEEEecC
Confidence 11 1111111111 1111 23333455666432 24444
Q ss_pred CC--ceeeccEEEEccCCCCCCCC--CCccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHH
Q psy2398 301 DD--THIEVDTIIYATGYNRHFPF--IDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSY 375 (433)
Q Consensus 301 dG--~~~~~D~vi~atG~~~~~~~--l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~ 375 (433)
+| +++++|.||+|+|++|+.++ ++...+..+ .+++.+++. +.++.|+||++|||+..+...+.|..||+.+|.+
T Consensus 260 ~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 338 (470)
T 1dxl_A 260 GGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNER-FSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEY 338 (470)
T ss_dssp SCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTT-CBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHH
T ss_pred CCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcC-CccCCCCEEEEeccCCCCccHHHHHHHHHHHHHH
Confidence 55 57999999999999999988 444455553 355777665 5689999999999988767788999999999999
Q ss_pred Hhhh
Q psy2398 376 IQAF 379 (433)
Q Consensus 376 i~g~ 379 (433)
+.|.
T Consensus 339 i~g~ 342 (470)
T 1dxl_A 339 LAGK 342 (470)
T ss_dssp HTTS
T ss_pred HcCC
Confidence 9985
No 39
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.98 E-value=8.4e-33 Score=267.27 Aligned_cols=291 Identities=15% Similarity=0.094 Sum_probs=196.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCC--eEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNIN--YDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~--v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.++||+|||||++|+++|..|++.|.+ |++||+.+..+..... .++... ....
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~--------------l~~~~~-----------~~~~ 62 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP--------------LSKEYL-----------AREK 62 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG--------------GGTTTT-----------TTSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc--------------CCHHHH-----------cCCC
Confidence 457999999999999999999999987 9999998754311000 000000 0000
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSM 163 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~ 163 (433)
...++..+...+..+.++ .++++++|+.++.+ .+.|++.++..+.||+||+|||+ .|..|+++|.-...+.+..
T Consensus 63 ~~~~~~~~~~~~~~~~~i--~~~~~~~v~~id~~--~~~v~~~~g~~~~~d~lvlAtG~--~~~~~~i~g~~~~~v~~~~ 136 (415)
T 3lxd_A 63 TFERICIRPAQFWEDKAV--EMKLGAEVVSLDPA--AHTVKLGDGSAIEYGKLIWATGG--DPRRLSCVGADLAGVHAVR 136 (415)
T ss_dssp CSGGGBSSCHHHHHHTTE--EEEETCCEEEEETT--TTEEEETTSCEEEEEEEEECCCE--ECCCCBTTSSCCBTEECCC
T ss_pred CHHHhccCCHHHHHHCCc--EEEeCCEEEEEECC--CCEEEECCCCEEEeeEEEEccCC--ccCCCCCCCccccCEEEEc
Confidence 011111122334455666 57888899998764 34677888888999999999998 8899999882112222211
Q ss_pred CCCCCC-----CCC-CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHH
Q psy2398 164 DYKSPD-----QIR-NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETM 237 (433)
Q Consensus 164 ~~~~~~-----~~~-~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~ 237 (433)
...+.. ... +++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+ +++. ++.
T Consensus 137 ~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~-l~~~------------~~~--------- 194 (415)
T 3lxd_A 137 TKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV-LARV------------AGE--------- 194 (415)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST-TTTT------------SCH---------
T ss_pred CHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch-hhhh------------cCH---------
Confidence 111100 112 789999999999999999999999999999988752 1211 011
Q ss_pred HHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC-----eEEecCCceeeccEEEE
Q psy2398 238 AYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN-----IVHFVDDTHIEVDTIIY 312 (433)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~-----~v~~~dG~~~~~D~vi~ 312 (433)
.+.+.+.+.+. ..++ ++.....|+++... .|.++||+++++|.||+
T Consensus 195 ~~~~~l~~~l~----~~GV-------------------------~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 195 ALSEFYQAEHR----AHGV-------------------------DLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIV 245 (415)
T ss_dssp HHHHHHHHHHH----HTTC-------------------------EEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHH----hCCC-------------------------EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 11111111111 1111 34445677777532 57889999999999999
Q ss_pred ccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC-----------hhhHHHHHHHHHHHHHhhhh
Q psy2398 313 ATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG-----------LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 313 atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~-----------~~~~a~~qa~~~a~~i~g~~ 380 (433)
|||++|+.++++...+..++ ++.++. .+.++.|+||++|||+..+. .++.|..||+.+|++|.|+.
T Consensus 246 a~G~~p~~~l~~~~gl~~~~-gi~vd~-~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 246 GIGIVPCVGALISAGASGGN-GVDVDE-FCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp CSCCEESCHHHHHTTCCCSS-SEECCT-TCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCccChHHHHhCCCCcCC-CEEECC-CCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 99999999888766666553 455554 45788999999999986543 35789999999999999874
No 40
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.8e-32 Score=266.39 Aligned_cols=307 Identities=19% Similarity=0.188 Sum_probs=197.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCC---
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDN--- 78 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--- 78 (433)
.++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.+.. |.+...+.... .+.....+.....
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~g----ciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 84 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVG----CVPKKVMWYASDLATRVSHANEYGLYQNLPL 84 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHS----HHHHHHHHHHHHHHHHHTTTTTTTBSTTSCC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccC----cHHHHHHHHHHHHHHHHHhHHhcCccccccc
Confidence 4589999999999999999999999999999997 6899987531 22221110000 0000011111000
Q ss_pred -C-CCCCCHHHHHHH-----------HHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc--EEEeCEEEEccCCC
Q psy2398 79 -Y-PVYPNHSMMLDY-----------LRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK--KKKYDFIAVCNGAQ 143 (433)
Q Consensus 79 -~-~~~~~~~~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~--~~~~d~vIvAtG~~ 143 (433)
. ........+.++ +....+..++ .+..+ ++..+ +.+.+.+.+.++. ++.||+||+|||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs- 158 (479)
T 2hqm_A 85 DKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFN--KDGNVEVQKRDNTTEVYSANHILVATGG- 158 (479)
T ss_dssp SGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEEC--TTSCEEEEESSSCCEEEEEEEEEECCCE-
T ss_pred ccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCC-
Confidence 0 011122233222 2233334444 23333 34433 3456778777776 7999999999998
Q ss_pred CCCCCC-CCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHH
Q psy2398 144 RVARYP-NYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQW 222 (433)
Q Consensus 144 s~p~~p-~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~ 222 (433)
.|..| +++|. ...+++.++.... ..+++++|||+|.+|+|+|..|.+.+.+|+++.+.+.. +|..
T Consensus 159 -~p~~p~~i~g~--~~~~~~~~~~~l~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-l~~~--------- 224 (479)
T 2hqm_A 159 -KAIFPENIPGF--ELGTDSDGFFRLE-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV-LRKF--------- 224 (479)
T ss_dssp -EECCCTTSTTG--GGSBCHHHHHHCS-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS-CTTS---------
T ss_pred -CCCCCCCCCCc--ccccchHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc-cccc---------
Confidence 88888 88882 1223333222222 24789999999999999999999999999999988652 2321
Q ss_pred hHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC------Ce
Q psy2398 223 MLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG------NI 296 (433)
Q Consensus 223 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~------~~ 296 (433)
+..+.. .+.+.+. ..++ ++.....|+++.+ ..
T Consensus 225 ----d~~~~~-----~l~~~l~--------~~Gv-------------------------~i~~~~~v~~i~~~~~~~~~~ 262 (479)
T 2hqm_A 225 ----DECIQN-----TITDHYV--------KEGI-------------------------NVHKLSKIVKVEKNVETDKLK 262 (479)
T ss_dssp ----CHHHHH-----HHHHHHH--------HHTC-------------------------EEECSCCEEEEEECC-CCCEE
T ss_pred ----CHHHHH-----HHHHHHH--------hCCe-------------------------EEEeCCEEEEEEEcCCCcEEE
Confidence 111111 1111111 0111 3333455666642 25
Q ss_pred EEecCC-ceeeccEEEEccCCCCCCCC-CCccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHH
Q psy2398 297 VHFVDD-THIEVDTIIYATGYNRHFPF-IDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIR 373 (433)
Q Consensus 297 v~~~dG-~~~~~D~vi~atG~~~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a 373 (433)
|.++|| +++++|.||+|+|++|+..+ ++..++..+ ++++.+++. +.++.|+||++|||...+..++.|..||+.+|
T Consensus 263 v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa 341 (479)
T 2hqm_A 263 IHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEY-QNTNVPNIYSLGDVVGKVELTPVAIAAGRKLS 341 (479)
T ss_dssp EEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTT-CBCSSTTEEECGGGTTSSCCHHHHHHHHHHHH
T ss_pred EEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCC-CccCCCCEEEEEecCCCcccHHHHHHHHHHHH
Confidence 778899 78999999999999999865 555555553 455666655 47899999999999876678889999999999
Q ss_pred HHHhhhh
Q psy2398 374 SYIQAFI 380 (433)
Q Consensus 374 ~~i~g~~ 380 (433)
.+|.|..
T Consensus 342 ~~i~~~~ 348 (479)
T 2hqm_A 342 NRLFGPE 348 (479)
T ss_dssp HHHHSCG
T ss_pred HHhcCCC
Confidence 9998754
No 41
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.98 E-value=2.1e-32 Score=276.02 Aligned_cols=292 Identities=14% Similarity=0.221 Sum_probs=204.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.+++|+|||||++|+++|..|++. |.+|+|||+.+.++ |... ..+. . .... ...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~~-----~lp~---~-------~~g~-------~~~ 90 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FANC-----GLPY---Y-------IGGV-------ITE 90 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGG-----GHHH---H-------HTTS-------SCC
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccCC-----CCch---h-------hcCc-------CCC
Confidence 357999999999999999999998 89999999988764 1100 0000 0 0000 011
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEccCCCCCCCCCCCCCC-CCCce
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-SNGK--KKKYDFIAVCNGAQRVARYPNYSGY-FSGEI 159 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~--~~~~d~vIvAtG~~s~p~~p~i~g~-~~g~~ 159 (433)
....+..++..+++++++ .++++++|+.++.+.+.+.+.. .++. .+.||+||+|||+ .|..|+++|. ....+
T Consensus 91 ~~~~~~~~~~~~~~~~gi--~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~--~p~~p~i~G~~~~~~v 166 (588)
T 3ics_A 91 RQKLLVQTVERMSKRFNL--DIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA--KPIVPSIPGIEEAKAL 166 (588)
T ss_dssp GGGGBSSCHHHHHHHTTC--EEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE--EECCCCCTTTTTCTTE
T ss_pred hHHhhccCHHHHHHhcCc--EEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC--CCCCCCCCCcccCCCe
Confidence 122344567777888888 5889999999998778777765 3454 6899999999998 8899999982 22234
Q ss_pred eccCCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcC
Q psy2398 160 LHSMDYKSPD-------QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSS 232 (433)
Q Consensus 160 ~~~~~~~~~~-------~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~ 232 (433)
++.....+.. ...+++++|||+|.+|+|+|..+++.+.+|+++.+.+. ++|.. +.
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------~~---- 228 (588)
T 3ics_A 167 FTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ-VMPPI-------------DY---- 228 (588)
T ss_dssp EECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SCTTS-------------CH----
T ss_pred EEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc-ccccC-------------CH----
Confidence 4433322211 13578999999999999999999999999999998764 22321 01
Q ss_pred chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--CeEEecCCceeeccEE
Q psy2398 233 KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--NIVHFVDDTHIEVDTI 310 (433)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~~v~~~dG~~~~~D~v 310 (433)
.+.+.+.+.+. ..++ ++.....|+++.. ..|.+++|+++++|.|
T Consensus 229 -----~~~~~l~~~l~----~~GV-------------------------~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~V 274 (588)
T 3ics_A 229 -----EMAAYVHEHMK----NHDV-------------------------ELVFEDGVDALEENGAVVRLKSGSVIQTDML 274 (588)
T ss_dssp -----HHHHHHHHHHH----HTTC-------------------------EEECSCCEEEEEGGGTEEEETTSCEEECSEE
T ss_pred -----HHHHHHHHHHH----HcCC-------------------------EEEECCeEEEEecCCCEEEECCCCEEEcCEE
Confidence 11111111111 0111 3334556777754 6789999999999999
Q ss_pred EEccCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHHHHHHHHhh
Q psy2398 311 IYATGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 311 i~atG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~~~a~~i~g 378 (433)
|+|||++|+.++++..++.. +.+++.+++ .+.++.|+||++|||+.. ...++.|..||+.+|.+|.|
T Consensus 275 i~a~G~~p~~~~l~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 275 ILAIGVQPESSLAKGAGLALGVRGTIKVNE-KFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp EECSCEEECCHHHHHTTCCBCGGGCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEccCCCCChHHHHhcCceEcCCCCEEECC-ccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 99999999988877655555 345566654 457899999999999841 24667899999999999998
No 42
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=7.2e-32 Score=266.40 Aligned_cols=302 Identities=17% Similarity=0.184 Sum_probs=188.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCCCCCCCCCCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 83 (433)
+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+.. |.+...+... ..+.....+.+... . ..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~g----c~P~k~l~~~a~~~~~~~~~~~~g~~~~-~-~~ 75 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVG----CVPKKIMFNAASVHDILENSRHYGFDTK-F-SF 75 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTS----HHHHHHHHHHHHHHHHHHHGGGGTCCCC-C-CC
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccC----CcchHHHHHHHHHHHHHHhhHhcCCccC-C-cc
Confidence 89999999999999999999999999999998 5899987642 2222111000 00000011111100 0 11
Q ss_pred CHHHH-----------HHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-----------ccCcEEEeCEEEEccC
Q psy2398 84 NHSMM-----------LDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-----------SNGKKKKYDFIAVCNG 141 (433)
Q Consensus 84 ~~~~~-----------~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-----------~~g~~~~~d~vIvAtG 141 (433)
....+ ...+....++.++ .+..++ +..++ .+.+.+.. .++.++.||+||+|||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~id--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtG 150 (500)
T 1onf_A 76 NLPLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGT-ASFLS--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVG 150 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CCCC----------------------------CBSSEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEee--CCEEEEEeccccccccccCCCceEEEeCEEEECCC
Confidence 22222 2233344455566 355443 22232 23333432 1245689999999999
Q ss_pred CCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhH
Q psy2398 142 AQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQ 221 (433)
Q Consensus 142 ~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~ 221 (433)
+ .|..|+++|. ..++++.++..... +++++|||+|.+|+|+|..|++.+.+|+++.|.+.. +|..
T Consensus 151 s--~p~~p~i~G~--~~~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-l~~~-------- 215 (500)
T 1onf_A 151 N--KPVFPPVKGI--ENTISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI-LRKF-------- 215 (500)
T ss_dssp C--CBCCCSCTTG--GGCEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS-CTTS--------
T ss_pred C--CCCCCCCCCC--CcccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc-Cccc--------
Confidence 8 8889999982 13455555544444 789999999999999999999999999999988752 2321
Q ss_pred HhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC-----Ce
Q psy2398 222 WMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG-----NI 296 (433)
Q Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~-----~~ 296 (433)
+..+.. .+.+. +. ..++ ++.....++++.+ ..
T Consensus 216 -----d~~~~~-----~l~~~----l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~~ 252 (500)
T 1onf_A 216 -----DESVIN-----VLEND----MK----KNNI-------------------------NIVTFADVVEIKKVSDKNLS 252 (500)
T ss_dssp -----CHHHHH-----HHHHH----HH----HTTC-------------------------EEECSCCEEEEEESSTTCEE
T ss_pred -----chhhHH-----HHHHH----HH----hCCC-------------------------EEEECCEEEEEEEcCCceEE
Confidence 011111 11111 11 1111 3334456666642 25
Q ss_pred EEecCCce-eeccEEEEccCCCCCCCC--CCcccccccCCccccccccccCCCCcEEEEcccc-----------------
Q psy2398 297 VHFVDDTH-IEVDTIIYATGYNRHFPF--IDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVN----------------- 356 (433)
Q Consensus 297 v~~~dG~~-~~~D~vi~atG~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~----------------- 356 (433)
+.++||++ +++|.||+|+|++|+.++ ++...+..+.+++.+++. +.++.|+||++|||+
T Consensus 253 v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~ 331 (500)
T 1onf_A 253 IHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDEN-QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLY 331 (500)
T ss_dssp EEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTT-CBCSSSSEEECSTTEEEC--------------
T ss_pred EEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCC-cccCCCCEEEEecccccccccccccccccccc
Confidence 67889988 999999999999999864 454455555556766665 468999999999998
Q ss_pred -----------------ccCChhhHHHHHHHHHHHHHhhhh
Q psy2398 357 -----------------AAAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 357 -----------------~~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
..+.+++.|..||+.+|.+|.|..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 372 (500)
T 1onf_A 332 NEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKK 372 (500)
T ss_dssp ----------------CBCCCCHHHHHHHHHHHHHHHHSCT
T ss_pred ccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCC
Confidence 234567889999999999998753
No 43
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.98 E-value=4.7e-32 Score=266.07 Aligned_cols=309 Identities=13% Similarity=0.123 Sum_probs=199.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCC----ccc-CCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF----NTQ-VPDYPMPDNYPV 81 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~ 81 (433)
++||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... |.++..+..... +.. +..+..+.....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g----~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVG----CIPSKALLHATHLYHDAHANFARYGLMGGEGV 77 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHHTHHHHTEECGGGC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcC----cHhHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 37999999999999999999999999999999989999987541 222211100000 000 000000000000
Q ss_pred CCCHHH-----------HHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCCC
Q psy2398 82 YPNHSM-----------MLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 82 ~~~~~~-----------~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
...... +...+....++.++ .+..++.+ .+ +.+.+.|.+.+| .++.||+||+|||+ .|..
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i--~~~~~~v~~~~G~~~~~~~d~lviAtG~--~p~~ 150 (468)
T 2qae_A 78 TMDSAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEGS-FE--TAHSIRVNGLDGKQEMLETKKTIIATGS--EPTE 150 (468)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEE-EE--ETTEEEEEETTSCEEEEEEEEEEECCCE--EECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-Ee--eCCEEEEEecCCceEEEEcCEEEECCCC--CcCC
Confidence 011122 22233455556666 35555433 33 457788888777 67999999999998 8888
Q ss_pred CCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhch
Q psy2398 149 PNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGN 228 (433)
Q Consensus 149 p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~ 228 (433)
|+++|.....++++.++..... .+++++|||+|.+|+|+|..+.+.+.+|+++.|.+. ++|.. +.
T Consensus 151 p~~~g~~~~~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------d~ 215 (468)
T 2qae_A 151 LPFLPFDEKVVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR-CAPTL-------------DE 215 (468)
T ss_dssp BTTBCCCSSSEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSTTS-------------CH
T ss_pred CCCCCCCcCceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc-ccccC-------------CH
Confidence 8888721123555544443333 478999999999999999999999999999998864 22321 11
Q ss_pred hhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----CeEEec--CC
Q psy2398 229 KFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----NIVHFV--DD 302 (433)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~~v~~~--dG 302 (433)
.+.. .+.+.+. . ..++ ++.....|.++.. ..+.+. +|
T Consensus 216 ~~~~-----~l~~~l~---~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~~~g 258 (468)
T 2qae_A 216 DVTN-----ALVGALA---K----NEKM-------------------------KFMTSTKVVGGTNNGDSVSLEVEGKNG 258 (468)
T ss_dssp HHHH-----HHHHHHH---H----HTCC-------------------------EEECSCEEEEEEECSSSEEEEEECC--
T ss_pred HHHH-----HHHHHHh---h----cCCc-------------------------EEEeCCEEEEEEEcCCeEEEEEEcCCC
Confidence 1111 1111110 1 0111 2333445566642 234554 67
Q ss_pred --ceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccc-cCChhhHHHHHHHHHHHHH
Q psy2398 303 --THIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNA-AAGLGDGLRLQGQFIRSYI 376 (433)
Q Consensus 303 --~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~-~~~~~~~a~~qa~~~a~~i 376 (433)
+++++|.||+|+|++|+.+++ +...+..+ .+++.+++. +.++.|+||++|||+. .+...+.|..||+.+|.++
T Consensus 259 ~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i 337 (468)
T 2qae_A 259 KRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDH-FETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEIL 337 (468)
T ss_dssp -EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTT-SBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHH
T ss_pred ceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCC-cccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHH
Confidence 579999999999999999885 33344443 355776655 5789999999999998 6778889999999999999
Q ss_pred hhh
Q psy2398 377 QAF 379 (433)
Q Consensus 377 ~g~ 379 (433)
.|+
T Consensus 338 ~~~ 340 (468)
T 2qae_A 338 AGK 340 (468)
T ss_dssp TTC
T ss_pred cCC
Confidence 985
No 44
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.97 E-value=4.8e-32 Score=266.41 Aligned_cols=309 Identities=15% Similarity=0.095 Sum_probs=200.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCC----cc--cCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF----NT--QVPDYPMPDNY 79 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~ 79 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|.+.. |.++..+..... +. .+..+.++...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g----~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~ 80 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVG----CIPSKALLNNSHYYHMAHGTDFASRGIEMSE 80 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHSSHHHHTTEEESC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccC----ccchHHHHHHHHHHHHhhhhhHhhCccccCC
Confidence 347999999999999999999999999999999989999987642 222111100000 00 00001110000
Q ss_pred CCCCCHHHHH-----------HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc-C-cEEEeCEEEEccCCCCCC
Q psy2398 80 PVYPNHSMML-----------DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN-G-KKKKYDFIAVCNGAQRVA 146 (433)
Q Consensus 80 ~~~~~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~-g-~~~~~d~vIvAtG~~s~p 146 (433)
.......+. ..+....++.++ .+..++. ..+ +.+.+.|++.+ + .++.||+||+|||+ .|
T Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs--~p 152 (474)
T 1zmd_A 81 -VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGYG-KIT--GKNQVTATKADGGTQVIDTKNILIATGS--EV 152 (474)
T ss_dssp -EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEE-EEE--ETTEEEEECTTSCEEEEEEEEEEECCCE--EE
T ss_pred -CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEe--cCCEEEEEecCCCcEEEEeCEEEECCCC--CC
Confidence 001122222 223445556666 4666643 333 46778888776 4 56999999999998 78
Q ss_pred CCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhh
Q psy2398 147 RYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQL 226 (433)
Q Consensus 147 ~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 226 (433)
..|+++|.....++++.++..... .+++++|||+|.+|+|+|..|.+.+.+|+++.+.+. ++|+. +
T Consensus 153 ~~p~i~g~~~~~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-~l~~~------------~ 218 (474)
T 1zmd_A 153 TPFPGITIDEDTIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH-VGGVG------------I 218 (474)
T ss_dssp CCCTTCCCCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSCSS------------C
T ss_pred CCCCCCCCCcCcEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc-cCCcc------------c
Confidence 888888821223566655554443 368999999999999999999999999999998864 23311 0
Q ss_pred chhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C---eEEe--
Q psy2398 227 GNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N---IVHF-- 299 (433)
Q Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~---~v~~-- 299 (433)
+..+.. .+.+. +. ..++ ++.....|.++.. . .+.+
T Consensus 219 ~~~~~~-----~l~~~----l~----~~Gv-------------------------~i~~~~~v~~i~~~~~~~~~v~~~~ 260 (474)
T 1zmd_A 219 DMEISK-----NFQRI----LQ----KQGF-------------------------KFKLNTKVTGATKKSDGKIDVSIEA 260 (474)
T ss_dssp CHHHHH-----HHHHH----HH----HTTC-------------------------EEECSEEEEEEEECTTSCEEEEEEE
T ss_pred CHHHHH-----HHHHH----HH----HCCC-------------------------EEEeCceEEEEEEcCCceEEEEEEe
Confidence 011111 11111 11 0111 2223334555542 1 2332
Q ss_pred ---cCCceeeccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHH
Q psy2398 300 ---VDDTHIEVDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIR 373 (433)
Q Consensus 300 ---~dG~~~~~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a 373 (433)
.+|+++++|.||+|+|++|+.++|. ...+..+ .+++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|
T Consensus 261 ~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa 339 (474)
T 1zmd_A 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTR-FQTKIPNIYAIGDVVAGPMLAHKAEDEGIICV 339 (474)
T ss_dssp TTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcC-CccCCCCEEEeeecCCCCccHHHHHHHHHHHH
Confidence 3567899999999999999998853 3344443 355776665 56899999999999987777889999999999
Q ss_pred HHHhhh
Q psy2398 374 SYIQAF 379 (433)
Q Consensus 374 ~~i~g~ 379 (433)
.++.|.
T Consensus 340 ~~i~~~ 345 (474)
T 1zmd_A 340 EGMAGG 345 (474)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999986
No 45
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=3.5e-32 Score=268.91 Aligned_cols=308 Identities=13% Similarity=0.139 Sum_probs=203.7
Q ss_pred CcEEEECCChHHHHHHHHHHhc---CCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCCCCCCCCC-
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG---NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPDYPMPDNY- 79 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~---g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~- 79 (433)
+||+|||||++|+++|..|++. |++|+|||+.+ +||+|.... +.++..+... ..+..+..+.++...
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g----~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDD----CVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTS----HHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcC----ccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 7999999999999999999999 99999999988 999887542 2222111100 000111111111000
Q ss_pred CCCCCHHH-----------HHHHHHHHHHHcCCCcceEeCcEEEEEEEe----CCeEEEEEccCc--EEEeCEEEEccCC
Q psy2398 80 PVYPNHSM-----------MLDYLRSYAKKFDVYNHSIFNTEVINLEQY----EDIWEVELSNGK--KKKYDFIAVCNGA 142 (433)
Q Consensus 80 ~~~~~~~~-----------~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~----~~~~~v~~~~g~--~~~~d~vIvAtG~ 142 (433)
........ +..++..++++.++ .+..++ +..++.. ++.+.|.+.+++ .+.||+||+|||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGA 154 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCC
Confidence 00112222 23334566667777 466664 5555431 256777777776 7999999999998
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHH
Q psy2398 143 QRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQW 222 (433)
Q Consensus 143 ~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~ 222 (433)
.|..|+++|.....++++.+...... .+++++|||+|.+|+|+|..+.+.+.+|+++.+.+. ++|..
T Consensus 155 --~p~~p~i~g~~~~~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~-~l~~~--------- 221 (499)
T 1xdi_A 155 --SPRILPSAQPDGERILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH-VLPYE--------- 221 (499)
T ss_dssp --EECCCGGGCCCSSSEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS-SSCCS---------
T ss_pred --CCCCCCCCCCCcCcEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc-ccccc---------
Confidence 88888888721223555555544433 368999999999999999999999999999998864 22321
Q ss_pred hHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEE
Q psy2398 223 MLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVH 298 (433)
Q Consensus 223 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~ 298 (433)
+..+.. .+.+. +. ..|+ ++.....|+++... .+.
T Consensus 222 ----d~~~~~-----~l~~~----l~----~~GV-------------------------~i~~~~~V~~i~~~~~~v~v~ 259 (499)
T 1xdi_A 222 ----DADAAL-----VLEES----FA----ERGV-------------------------RLFKNARAASVTRTGAGVLVT 259 (499)
T ss_dssp ----SHHHHH-----HHHHH----HH----HTTC-------------------------EEETTCCEEEEEECSSSEEEE
T ss_pred ----CHHHHH-----HHHHH----HH----HCCC-------------------------EEEeCCEEEEEEEeCCEEEEE
Confidence 011111 11111 11 1111 23334556666422 355
Q ss_pred ecCCceeeccEEEEccCCCCCCCC--CCcccccccC-CccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHH
Q psy2398 299 FVDDTHIEVDTIIYATGYNRHFPF--IDKEKLEWKL-GIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSY 375 (433)
Q Consensus 299 ~~dG~~~~~D~vi~atG~~~~~~~--l~~~~~~~~~-~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~ 375 (433)
+.+|+++++|.||+|+|++|+.++ ++..++..+. +++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|.+
T Consensus 260 ~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~ 338 (499)
T 1xdi_A 260 MTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRV-SRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYH 338 (499)
T ss_dssp ETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSS-SBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHH
T ss_pred ECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHH
Confidence 678889999999999999999988 4544555543 55666655 5789999999999998777788999999999999
Q ss_pred Hhhh
Q psy2398 376 IQAF 379 (433)
Q Consensus 376 i~g~ 379 (433)
+.|.
T Consensus 339 i~g~ 342 (499)
T 1xdi_A 339 ALGE 342 (499)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 9986
No 46
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=8.2e-32 Score=263.39 Aligned_cols=305 Identities=15% Similarity=0.203 Sum_probs=199.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 82 (433)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.... |.++..+.... .+..+..+..+.....
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g----~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~- 76 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVG----CIPSKALISASHRYEQAKHSEEMGIKAENVT- 76 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTS----HHHHHHHHHHHHHHHHHHTCGGGTEECCSCE-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcC----chhhHHHHHHHHHHHHHHHHHhcCcccCCCc-
Confidence 479999999999999999999999999999998 7899886541 22211100000 0000000000000000
Q ss_pred CCHH-----------HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC-cEEEeCEEEEccCCCCCCCCCC
Q psy2398 83 PNHS-----------MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG-KKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 83 ~~~~-----------~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g-~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
.... .+.+++...+++.++ .+..++.+. + +.+.+.|++.++ .++.||+||+|||+ .|..|+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATGs--~p~~~~ 149 (455)
T 1ebd_A 77 IDFAKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATGS--RPIELP 149 (455)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCCE--EECCBT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecCC--CCCCCC
Confidence 1111 133444556666676 466666543 3 467788888776 67999999999998 788888
Q ss_pred CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhh
Q psy2398 151 YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKF 230 (433)
Q Consensus 151 i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~ 230 (433)
++|. ...+.++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+. ++|.. +..+
T Consensus 150 ~~g~-~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------~~~~ 213 (455)
T 1ebd_A 150 NFKF-SNRILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE-ILSGF-------------EKQM 213 (455)
T ss_dssp TBCC-CSSEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS-SSTTS-------------CHHH
T ss_pred CCCc-cceEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc-ccccc-------------CHHH
Confidence 8771 223555544433333 368999999999999999999999999999998864 22311 0111
Q ss_pred cCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--Ce--EEec---CCc
Q psy2398 231 SSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--NI--VHFV---DDT 303 (433)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~~--v~~~---dG~ 303 (433)
.. .+.+. +. ..++ ++.....|.++.+ .. +.+. +|+
T Consensus 214 ~~-----~l~~~----l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~~g~~~ 255 (455)
T 1ebd_A 214 AA-----IIKKR----LK----KKGV-------------------------EVVTNALAKGAEEREDGVTVTYEANGETK 255 (455)
T ss_dssp HH-----HHHHH----HH----HTTC-------------------------EEEESEEEEEEEEETTEEEEEEEETTEEE
T ss_pred HH-----HHHHH----HH----HCCC-------------------------EEEeCCEEEEEEEeCCeEEEEEEeCCcee
Confidence 11 11111 11 1111 2333445555542 22 3443 456
Q ss_pred eeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 304 HIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 304 ~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
++++|.||+|+|++|+.+++ +...+..+ .+++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|.++.|.
T Consensus 256 ~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 256 TIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQ-CRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp EEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred EEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 79999999999999999884 44445543 355776665 57899999999999887777889999999999999985
No 47
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.97 E-value=1e-32 Score=272.27 Aligned_cols=305 Identities=16% Similarity=0.130 Sum_probs=192.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcc-----cCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNT-----QVPDYPMPDNYPV 81 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 81 (433)
++||+|||||++|+++|..|++.|++|+|||+.+.+||+|.+.. |++...+..+.... .+..+.......
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~g----ciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~- 99 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVG----CIPSKALLHASEMFHQAQHGLEALGVEVANP- 99 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc----chhhHHHHHHHHHHHHHHhhHhhcCcccCCC-
Confidence 47999999999999999999999999999999999999988652 23322211110000 011111110000
Q ss_pred CCCHHHHHH-----------HHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCCC
Q psy2398 82 YPNHSMMLD-----------YLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 82 ~~~~~~~~~-----------~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
......+.. .+....+..++ .+..+. +.. .+.+.+.|.+.+| .++.||+||+|||+ .|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~--~~~~~~~v~~~~g~~~~~~~d~lViATGs--~p-- 170 (491)
T 3urh_A 100 KLNLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQGT-GKV--LGQGKVSVTNEKGEEQVLEAKNVVIATGS--DV-- 170 (491)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEE--CSSSEEEEECTTSCEEEEECSEEEECCCE--EC--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEE-EEE--ecCCEEEEEeCCCceEEEEeCEEEEccCC--CC--
Confidence 111122222 22333344454 233332 222 2356778877766 46899999999998 33
Q ss_pred CCCCC-C--CCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHh
Q psy2398 149 PNYSG-Y--FSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQ 225 (433)
Q Consensus 149 p~i~g-~--~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 225 (433)
|.+|| . +.+..+++..........+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+.. +|..
T Consensus 171 ~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~~~------------ 237 (491)
T 3urh_A 171 AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI-LGGM------------ 237 (491)
T ss_dssp CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS-SSSS------------
T ss_pred CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc-cccC------------
Confidence 45565 2 455444443333333445789999999999999999999999999999988642 2211
Q ss_pred hchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeee--CC--eEEe
Q psy2398 226 LGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLN--GN--IVHF 299 (433)
Q Consensus 226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~--~~--~v~~ 299 (433)
+..+.. .+.+. + ....|.+ ...+.++. +. .+.+
T Consensus 238 -d~~~~~-----~l~~~----l-------------------------------~~~gV~v~~~~~v~~i~~~~~~~~v~~ 276 (491)
T 3urh_A 238 -DGEVAK-----QLQRM----L-------------------------------TKQGIDFKLGAKVTGAVKSGDGAKVTF 276 (491)
T ss_dssp -CHHHHH-----HHHHH----H-------------------------------HHTTCEEECSEEEEEEEEETTEEEEEE
T ss_pred -CHHHHH-----HHHHH----H-------------------------------HhCCCEEEECCeEEEEEEeCCEEEEEE
Confidence 011111 11111 1 1112332 33455553 22 2455
Q ss_pred cC---C--ceeeccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHH
Q psy2398 300 VD---D--THIEVDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQF 371 (433)
Q Consensus 300 ~d---G--~~~~~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~ 371 (433)
.+ | +++++|.||+|||++|+.++|. ...+..+ .+++.+++. +.++.|+||++|||...+...+.|..||+.
T Consensus 277 ~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~ 355 (491)
T 3urh_A 277 EPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH-FQTSIAGVYAIGDVVRGPMLAHKAEDEGVA 355 (491)
T ss_dssp EETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHH
T ss_pred EecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCC-CCCCCCCEEEEEecCCCccchhHHHHHHHH
Confidence 53 5 5689999999999999998853 3344443 455666654 578999999999999777888999999999
Q ss_pred HHHHHhhhh
Q psy2398 372 IRSYIQAFI 380 (433)
Q Consensus 372 ~a~~i~g~~ 380 (433)
+|.++.|..
T Consensus 356 aa~~i~g~~ 364 (491)
T 3urh_A 356 VAEIIAGQA 364 (491)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHcCCC
Confidence 999999864
No 48
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=7.3e-33 Score=272.65 Aligned_cols=308 Identities=19% Similarity=0.147 Sum_probs=198.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----Ccc-cCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNT-QVPDYPMPDNYP 80 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~ 80 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... |.++..+.... .+. .+..+..+....
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g----~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~ 79 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVG----CIPSKALLNNSHLFHQMHTEAQKRGIDVNGD 79 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHHTSGGGTEEECSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceec----cHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 458999999999999999999999999999999889999886542 12211100000 000 000000000000
Q ss_pred CCCCHHHHH-----------HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cE------EEeCEEEEccC
Q psy2398 81 VYPNHSMML-----------DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KK------KKYDFIAVCNG 141 (433)
Q Consensus 81 ~~~~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~------~~~d~vIvAtG 141 (433)
......++. ..+...+++.++ .+.+++.+.. +.+.+.|++.+| .+ +.||+||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 80 IKINVANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcC
Confidence 011222222 223444556666 4666765542 456788887666 56 99999999999
Q ss_pred CCCCCCCCCCCC-CCCC-ceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCCh
Q psy2398 142 AQRVARYPNYSG-YFSG-EILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPT 219 (433)
Q Consensus 142 ~~s~p~~p~i~g-~~~g-~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~ 219 (433)
+ .| +.++| .+.+ .+.++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.|++. ++|..
T Consensus 155 s--~p--~~~~g~~~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~------ 222 (478)
T 1v59_A 155 S--EV--TPFPGIEIDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ-IGASM------ 222 (478)
T ss_dssp E--EE--CCCTTCCCCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSSSS------
T ss_pred C--CC--CCCCCCCCCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc-ccccc------
Confidence 8 44 23444 3333 4555555544433 378999999999999999999999999999998875 22211
Q ss_pred hHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----C
Q psy2398 220 PQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----N 295 (433)
Q Consensus 220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~ 295 (433)
+. .+.+.+.+.+. ..++ ++.....++++.. .
T Consensus 223 -------~~---------~~~~~l~~~l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~ 257 (478)
T 1v59_A 223 -------DG---------EVAKATQKFLK----KQGL-------------------------DFKLSTKVISAKRNDDKN 257 (478)
T ss_dssp -------CH---------HHHHHHHHHHH----HTTC-------------------------EEECSEEEEEEEEETTTT
T ss_pred -------CH---------HHHHHHHHHHH----HCCC-------------------------EEEeCCEEEEEEEecCCC
Confidence 01 11111111111 0111 2222334555542 2
Q ss_pred --eEEec-----CCceeeccEEEEccCCCCCCC--CCCccccccc-CCccccccccccCCCCcEEEEccccccCChhhHH
Q psy2398 296 --IVHFV-----DDTHIEVDTIIYATGYNRHFP--FIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGL 365 (433)
Q Consensus 296 --~v~~~-----dG~~~~~D~vi~atG~~~~~~--~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a 365 (433)
.+.+. +|+++++|.||+|+|++|+.+ +++...+..+ .+++.+++. +.++.|+||++|||+..+.+.+.|
T Consensus 258 ~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A 336 (478)
T 1v59_A 258 VVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQ-FNSKFPHIKVVGDVTFGPMLAHKA 336 (478)
T ss_dssp EEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTT-SBCSSTTEEECGGGSSSCCCHHHH
T ss_pred eEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcC-CccCCCCEEEeeccCCCcccHHHH
Confidence 34554 456799999999999999988 6666566654 455777665 568999999999999877778899
Q ss_pred HHHHHHHHHHHhhhh
Q psy2398 366 RLQGQFIRSYIQAFI 380 (433)
Q Consensus 366 ~~qa~~~a~~i~g~~ 380 (433)
..||+.+|.++.|..
T Consensus 337 ~~~g~~aa~~i~~~~ 351 (478)
T 1v59_A 337 EEEGIAAVEMLKTGH 351 (478)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999999853
No 49
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=8.4e-32 Score=265.27 Aligned_cols=306 Identities=16% Similarity=0.165 Sum_probs=198.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-cCCCeEEEc--------cCCCCCCcccCCCCCCccccceEeecCCC----cccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE-GNINYDLYE--------MESDLGGVWNSQASCGRVYPSLHLISPKF----NTQVPD 72 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e--------~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 72 (433)
.++||+|||||++|+++|..|++ .|++|+||| +...+||+|.+.. |+|...+..... +..+..
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~g----ciP~k~l~~~a~~~~~~~~~~~ 81 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVG----CVPKKLMVTGAQYMDHLRESAG 81 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHS----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCC----cchHHHHHHHHHHHHHHhHHHh
Confidence 35899999999999999999999 999999999 3567999987642 333221111000 000111
Q ss_pred CCCCCCCC-CCCCHHHHHHHHHHH-----------HHHc-CCCcceEeCcEEEEEEEeCCeEEEEEc---c-----CcEE
Q psy2398 73 YPMPDNYP-VYPNHSMMLDYLRSY-----------AKKF-DVYNHSIFNTEVINLEQYEDIWEVELS---N-----GKKK 131 (433)
Q Consensus 73 ~~~~~~~~-~~~~~~~~~~~l~~~-----------~~~~-~~~~~i~~~~~V~~v~~~~~~~~v~~~---~-----g~~~ 131 (433)
+.+....+ ......++.++.+.+ .++. ++ .+..+ ++..++ .. +|++. + +..+
T Consensus 82 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~--~~--~v~v~~~~~~~~~~~~~~ 154 (495)
T 2wpf_A 82 FGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLES--KN--VVVVRETADPKSAVKERL 154 (495)
T ss_dssp TTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEE--TT--EEEEESSSSTTSCEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEee--CC--EEEEeecCCccCCCCeEE
Confidence 11110000 012234444443333 2333 54 34444 344443 33 45544 3 5579
Q ss_pred EeCEEEEccCCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhcc---CCcEEEEEecCce
Q psy2398 132 KYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHH---SEKVYHSTRRGYH 208 (433)
Q Consensus 132 ~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~---~~~V~~~~r~~~~ 208 (433)
.||+||+|||+ .|..|+++|. ..++++.++..... .+++++|||+|.+|+|+|..|.+. +.+|+++.|.+.
T Consensus 155 ~~d~lViATGs--~p~~p~i~G~--~~~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~- 228 (495)
T 2wpf_A 155 QADHILLATGS--WPQMPAIPGI--EHCISSNEAFYLPE-PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL- 228 (495)
T ss_dssp EEEEEEECCCE--EECCCCCTTG--GGCEEHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS-
T ss_pred EcCEEEEeCCC--CcCCCCCCCc--cccccHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc-
Confidence 99999999998 8889999882 12444444444333 368999999999999999999999 999999998874
Q ss_pred eecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCC
Q psy2398 209 YYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDD 288 (433)
Q Consensus 209 ~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 288 (433)
++|.+ +..+.. .+.+. +. ..++ ++.....
T Consensus 229 ~l~~~-------------d~~~~~-----~l~~~----l~----~~GV-------------------------~i~~~~~ 257 (495)
T 2wpf_A 229 ILRGF-------------DETIRE-----EVTKQ----LT----ANGI-------------------------EIMTNEN 257 (495)
T ss_dssp SCTTS-------------CHHHHH-----HHHHH----HH----HTTC-------------------------EEEESCC
T ss_pred ccccc-------------CHHHHH-----HHHHH----HH----hCCC-------------------------EEEeCCE
Confidence 22321 011111 11111 11 1111 3444556
Q ss_pred ceeeeC-----CeEEecCCceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCC
Q psy2398 289 IKNLNG-----NIVHFVDDTHIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAG 360 (433)
Q Consensus 289 v~~~~~-----~~v~~~dG~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~ 360 (433)
|+++.. ..|.++||+++++|.||+|+|++|+.++| +...+..+ .+++.+++. +.++.|+||++|||+..+.
T Consensus 258 v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~ 336 (495)
T 2wpf_A 258 PAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEF-SRTNVPNIYAIGDITDRLM 336 (495)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTT-CBCSSTTEEECGGGGCSCC
T ss_pred EEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCC-CccCCCCEEEEeccCCCcc
Confidence 666642 25778899999999999999999998854 44445544 455666654 5789999999999997667
Q ss_pred hhhHHHHHHHHHHHHHhhhh
Q psy2398 361 LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 361 ~~~~a~~qa~~~a~~i~g~~ 380 (433)
+++.|..||+.+|.+|.|..
T Consensus 337 l~~~A~~~g~~aa~~i~g~~ 356 (495)
T 2wpf_A 337 LTPVAINEGAALVDTVFGNK 356 (495)
T ss_dssp CHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHHHHHhcCCC
Confidence 88899999999999999853
No 50
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=1.5e-32 Score=276.19 Aligned_cols=292 Identities=16% Similarity=0.167 Sum_probs=197.1
Q ss_pred CcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++|+|||||++|+++|..|++. +.+|+|||+.+..+.. .. ..+. . +... .....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~--~~-----~l~~---~-------~~~~-------~~~~~ 57 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA--NC-----GLPY---H-------ISGE-------IAQRS 57 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC--GG-----GHHH---H-------HTSS-------SCCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc--cc-----CchH---H-------hcCC-------cCChH
Confidence 5999999999999999999998 7899999998866411 00 0000 0 0000 00112
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-cCc--EEEeCEEEEccCCCCCCCCCCCCCCCCCceecc
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-NGK--KKKYDFIAVCNGAQRVARYPNYSGYFSGEILHS 162 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~g~--~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~ 162 (433)
..+.+++..+.+++++ .++++++|+.++.+.+.+.+... ++. ++.||+||+|||+ .|..|+++|.....+.+.
T Consensus 58 ~~~~~~~~~~~~~~~i--~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~--~p~~p~ipG~~~~~v~~~ 133 (565)
T 3ntd_A 58 ALVLQTPESFKARFNV--EVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA--APIVPPIPGVDNPLTHSL 133 (565)
T ss_dssp GGBCCCHHHHHHHHCC--EEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE--EECCCCCTTCCSTTEECC
T ss_pred HhhccCHHHHHHhcCc--EEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC--CCCCCCCCCCCCCCEEEe
Confidence 2334555666777787 58889999999887777777652 233 6899999999998 899999998322223333
Q ss_pred CCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchH
Q psy2398 163 MDYKSPD-------QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEE 235 (433)
Q Consensus 163 ~~~~~~~-------~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~ 235 (433)
....+.. ...+++|+|||+|.+|+|+|..|.+.+.+|+++.|++. ++|.. +..+..
T Consensus 134 ~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------~~~~~~--- 196 (565)
T 3ntd_A 134 RNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ-VMTPV-------------DREMAG--- 196 (565)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS-SCTTS-------------CHHHHH---
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc-cchhc-------------CHHHHH---
Confidence 2221111 13578999999999999999999999999999999874 22311 011111
Q ss_pred HHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC---------------------
Q psy2398 236 TMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--------------------- 294 (433)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--------------------- 294 (433)
.+.+. +. ..++ ++.....++++..
T Consensus 197 --~l~~~----l~----~~GV-------------------------~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 241 (565)
T 3ntd_A 197 --FAHQA----IR----DQGV-------------------------DLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK 241 (565)
T ss_dssp --HHHHH----HH----HTTC-------------------------EEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT
T ss_pred --HHHHH----HH----HCCC-------------------------EEEeCCeEEEEeccccccccccccccccccccCC
Confidence 11111 11 0111 2222333333321
Q ss_pred C--eEEecCCceeeccEEEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc----------CCh
Q psy2398 295 N--IVHFVDDTHIEVDTIIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGL 361 (433)
Q Consensus 295 ~--~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~ 361 (433)
. .+.+.||+++++|.||+|||++|+.++++..++..+ .+++.++. .+.++.|+||++|||+.. ...
T Consensus 242 ~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~ 320 (565)
T 3ntd_A 242 GHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNA-MMQTSDPAIYAVGDAVEEQDFVTGQACLVPL 320 (565)
T ss_dssp CEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCT-TCBCSSTTEEECGGGBCEEBTTTCCEECCCC
T ss_pred CcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECC-CcccCCCCEEEeeeeEeeccccCCceeeccc
Confidence 1 466789999999999999999999888765555553 35566665 457899999999999731 235
Q ss_pred hhHHHHHHHHHHHHHhhhh
Q psy2398 362 GDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 362 ~~~a~~qa~~~a~~i~g~~ 380 (433)
++.|..||+.+|++|.|+.
T Consensus 321 ~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 321 AGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 7789999999999999864
No 51
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.97 E-value=2.6e-32 Score=268.16 Aligned_cols=300 Identities=15% Similarity=0.155 Sum_probs=186.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++||+|||||++|+++|..|++. |.+|+|||+++.++ |... ..+. ....... ... ..++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~-----gl~~---~~~g~~~------~~~--~~~~~ 64 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGC-----GIPY---YVSGEVS------NIE--SLQAT 64 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--cccc-----ccch---hhcCCCC------chH--Hhccc
Confidence 37999999999999999999998 89999999988753 1110 0000 0000000 000 00111
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEccCCCCCCCCCCCCCCCCCceec
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-SNGK--KKKYDFIAVCNGAQRVARYPNYSGYFSGEILH 161 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~--~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~ 161 (433)
..++..+...+.+++++ .++++++|+.++.+.+.+.+.. .++. .+.||+||+|||+ .|..|+++|.....+.+
T Consensus 65 ~~~~~~~~~~~~~~~gi--~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~--~p~~p~i~G~~~~~v~~ 140 (472)
T 3iwa_A 65 PYNVVRDPEFFRINKDV--EALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS--KANRPPVEGMDLAGVTP 140 (472)
T ss_dssp ----------------C--EEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE--EECCCSCTTTTSBTEEE
T ss_pred cchhccCHHHHhhhcCc--EEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC--CcCCCCCCCCCCCCEEE
Confidence 12245566666666777 4788999999988777777765 2244 6899999999998 88999999821222333
Q ss_pred cCCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhcc-CCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCc
Q psy2398 162 SMDYKSPD-------QIRNKRVLVVGAGNSGCDIAVDASHH-SEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSK 233 (433)
Q Consensus 162 ~~~~~~~~-------~~~~~~v~VvG~G~sg~d~a~~l~~~-~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~ 233 (433)
.....+.. ...+++++|||+|.+|+|+|..+.+. +.+|+++.+.+. ++|+. ++.
T Consensus 141 ~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~-~l~~~------------~~~----- 202 (472)
T 3iwa_A 141 VTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQ-IMPGF------------TSK----- 202 (472)
T ss_dssp CCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSS-SSTTT------------SCH-----
T ss_pred eCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCc-ccccc------------cCH-----
Confidence 22221111 13478999999999999999999999 999999998864 22211 001
Q ss_pred hHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C--eEEecCCceeeccE
Q psy2398 234 EETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N--IVHFVDDTHIEVDT 309 (433)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~--~v~~~dG~~~~~D~ 309 (433)
.+.+.+.+.+. ..++ ++.....|+++.. . .+.+.||+++++|.
T Consensus 203 ----~~~~~l~~~l~----~~GV-------------------------~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~ 249 (472)
T 3iwa_A 203 ----SLSQMLRHDLE----KNDV-------------------------VVHTGEKVVRLEGENGKVARVITDKRTLDADL 249 (472)
T ss_dssp ----HHHHHHHHHHH----HTTC-------------------------EEECSCCEEEEEESSSBEEEEEESSCEEECSE
T ss_pred ----HHHHHHHHHHH----hcCC-------------------------EEEeCCEEEEEEccCCeEEEEEeCCCEEEcCE
Confidence 11111111111 0111 2333456666643 2 26788999999999
Q ss_pred EEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHHHHHHHHhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~~~a~~i~g 378 (433)
||+|||++|+.++++..++..+ .+++.+++ .+.++.|+||++|||+.. ...++.|..||+.+|++|.|
T Consensus 250 Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 250 VILAAGVSPNTQLARDAGLELDPRGAIIVDT-RMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp EEECSCEEECCHHHHHHTCCBCTTCCEECCT-TCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred EEECCCCCcCHHHHHhCCccCCCCCCEEECC-CcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 9999999999887765455553 45566665 457899999999999832 23567899999999999998
Q ss_pred hh
Q psy2398 379 FI 380 (433)
Q Consensus 379 ~~ 380 (433)
..
T Consensus 329 ~~ 330 (472)
T 3iwa_A 329 GD 330 (472)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 52
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=5.9e-32 Score=266.09 Aligned_cols=305 Identities=15% Similarity=0.127 Sum_probs=199.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... +.++..+.... .+..+..+..+... .
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g----~~psk~ll~~~~~~~~~~~~~~~gi~~~~-~ 79 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG----CIPSKALLHNAAVIDEVRHLAANGIKYPE-P 79 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHS----HHHHHHHHHHHHHHHHHHHGGGGTCCCCC-C
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeec----ccchHHHHHHHHHHHHHHHHHhCCcccCC-C
Confidence 358999999999999999999999999999999888999876531 22211100000 00000001111000 0
Q ss_pred CCCHHHHH-----------HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC------------cEEEeCEEEE
Q psy2398 82 YPNHSMML-----------DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG------------KKKKYDFIAV 138 (433)
Q Consensus 82 ~~~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g------------~~~~~d~vIv 138 (433)
......+. +.+...+++.++ .+..++.+. .+.+.+.+++.++ .++.||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lVi 154 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCII 154 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEE
Confidence 11222222 223445556666 455555433 3456777776555 5689999999
Q ss_pred ccCCCCCCCCCC-CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCC
Q psy2398 139 CNGAQRVARYPN-YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGK 217 (433)
Q Consensus 139 AtG~~s~p~~p~-i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~ 217 (433)
|||+ .|..|+ ++. ...++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+. ++|..
T Consensus 155 AtGs--~p~~~~~i~~--~~~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~-~l~~~---- 224 (482)
T 1ojt_A 155 AAGS--RVTKLPFIPE--DPRIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG-LMQGA---- 224 (482)
T ss_dssp CCCE--EECCCSSCCC--CTTEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS-SSTTS----
T ss_pred CCCC--CCCCCCCCCc--cCcEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc-ccccc----
Confidence 9999 677776 553 224555554444333 378999999999999999999999999999998875 22321
Q ss_pred ChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeC-
Q psy2398 218 PTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNG- 294 (433)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~- 294 (433)
+. .+.+.+.+.+ ....|.+ ...+.++.+
T Consensus 225 ---------~~---------~~~~~l~~~l-------------------------------~~~gV~i~~~~~v~~i~~~ 255 (482)
T 1ojt_A 225 ---------DR---------DLVKVWQKQN-------------------------------EYRFDNIMVNTKTVAVEPK 255 (482)
T ss_dssp ---------CH---------HHHHHHHHHH-------------------------------GGGEEEEECSCEEEEEEEE
T ss_pred ---------CH---------HHHHHHHHHH-------------------------------HhcCCEEEECCEEEEEEEc
Confidence 01 1111111111 1113333 445666642
Q ss_pred ---CeEEecC----CceeeccEEEEccCCCCCCCCC--CcccccccC-CccccccccccCCCCcEEEEccccccCChhhH
Q psy2398 295 ---NIVHFVD----DTHIEVDTIIYATGYNRHFPFI--DKEKLEWKL-GIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDG 364 (433)
Q Consensus 295 ---~~v~~~d----G~~~~~D~vi~atG~~~~~~~l--~~~~~~~~~-~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~ 364 (433)
..+.+.| |+++++|.||+|+|++|+.++| +...+..+. +++.+++. +.++.|+||++|||+..+.+.+.
T Consensus 256 ~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~l~~~ 334 (482)
T 1ojt_A 256 EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQ-MRTNVPHIYAIGDIVGQPMLAHK 334 (482)
T ss_dssp TTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTT-SBCSSTTEEECGGGTCSSCCHHH
T ss_pred CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCC-cccCCCCEEEEEcccCCCccHHH
Confidence 2466777 7789999999999999999875 444455543 55766664 57899999999999987777889
Q ss_pred HHHHHHHHHHHHhhhh
Q psy2398 365 LRLQGQFIRSYIQAFI 380 (433)
Q Consensus 365 a~~qa~~~a~~i~g~~ 380 (433)
|..||+.+|.++.|..
T Consensus 335 A~~~g~~aa~~i~g~~ 350 (482)
T 1ojt_A 335 AVHEGHVAAENCAGHK 350 (482)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999999853
No 53
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.97 E-value=3.9e-33 Score=274.73 Aligned_cols=304 Identities=17% Similarity=0.153 Sum_probs=194.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 82 (433)
++||+|||||++|+++|..|++.|++|+|||++ .+||+|.+.. |.|+..+.... ....++.+.++... ..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~g----ciPsk~l~~~a~~~~~~~~~~~~g~~~~~-~~ 81 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVG----CMPSKLLIAAADASYHASQTDLFGIQVDR-IS 81 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHS----HHHHHHHHHHHHHHHHHTCGGGGTEECSE-EE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccC----hhcCHHHHHHHHHHHHHhhhhhcCcCCCC-Cc
Confidence 489999999999999999999999999999996 4999986542 33322211110 00111111111000 11
Q ss_pred CCHHHHHHHHHHHHHHcCC----------CcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDV----------YNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYS 152 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~----------~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~ 152 (433)
....++.+++..+.+++.. ...+..+ ...- .+.++|.+.++.++.||+||+|||+ .|..|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~----~~~~~v~~~~~~~~~~d~lViATGs--~p~~p~~~ 154 (492)
T 3ic9_A 82 VNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKF----LDEHTLQVDDHSQVIAKRIVIATGS--RPNYPEFL 154 (492)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEE----EETTEEEETTTEEEEEEEEEECCCE--ECCCCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEE----ecCCEEEEcCCcEEEeCEEEEccCC--CCcCCCCC
Confidence 3345555555544443211 0001111 1111 1234677777778999999999997 88888766
Q ss_pred CCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcC
Q psy2398 153 GYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSS 232 (433)
Q Consensus 153 g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~ 232 (433)
+.....++++.++..... .+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.. +|.. +.
T Consensus 155 ~~~~~~v~t~~~~~~~~~-~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-l~~~-------------d~---- 215 (492)
T 3ic9_A 155 AAAGSRLLTNDNLFELND-LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV-ANLQ-------------DE---- 215 (492)
T ss_dssp HTTGGGEECHHHHTTCSS-CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC-TTCC-------------CH----
T ss_pred CccCCcEEcHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc-cccC-------------CH----
Confidence 533334555544444333 3789999999999999999999999999999998752 2221 01
Q ss_pred chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCC-CeeecCCceeeeC--C--eEEec--CC--c
Q psy2398 233 KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHG-DILPKDDIKNLNG--N--IVHFV--DD--T 303 (433)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~v~~~~~--~--~v~~~--dG--~ 303 (433)
.+.+.+.+.+. .. ++.....++++.. . .+.+. +| .
T Consensus 216 -----~~~~~l~~~l~-------------------------------~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~ 259 (492)
T 3ic9_A 216 -----EMKRYAEKTFN-------------------------------EEFYFDAKARVISTIEKEDAVEVIYFDKSGQKT 259 (492)
T ss_dssp -----HHHHHHHHHHH-------------------------------TTSEEETTCEEEEEEECSSSEEEEEECTTCCEE
T ss_pred -----HHHHHHHHHHh-------------------------------hCcEEEECCEEEEEEEcCCEEEEEEEeCCCceE
Confidence 11111111111 11 2223344555532 2 24454 77 5
Q ss_pred eeeccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhh
Q psy2398 304 HIEVDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 304 ~~~~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g 378 (433)
++++|.||+|||++|+.++|+ ...+..+ .+.+.++...+.++.|+||++|||...+.+.+.|..||+.+|.++.+
T Consensus 260 ~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 260 TESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp EEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 799999999999999999854 3345543 44555552566789999999999998778888999999999999987
No 54
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.9e-32 Score=263.68 Aligned_cols=287 Identities=13% Similarity=0.103 Sum_probs=191.8
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC--CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++|+|||||++|+++|..|++.|. +|+|||+.+..+.. . + . .++....... .+.. .
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~--~------~----l~~~~l~~~~--~~~~---~--- 59 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ--R--P------P----LSKAYLKSGG--DPNS---L--- 59 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC--S--G------G----GGTGGGGSCC--CTTS---S---
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC--C--c------c----CCHHHHCCCC--CHHH---c---
Confidence 689999999999999999999998 89999998754211 0 0 0 0000000000 0000 0
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC-CCCCceeccCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG-YFSGEILHSMD 164 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~~~~~ 164 (433)
......+..+.++ +++. ++|+.++.+.. .+++.++.++.||+||+|||+ .|..|+++| ... .+.+...
T Consensus 60 ---~~~~~~~~~~~~i--~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~--~p~~~~i~g~~~~-~v~~~~~ 128 (404)
T 3fg2_P 60 ---MFRPEKFFQDQAI--ELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGA--RNRMLDVPNASLP-DVLYLRT 128 (404)
T ss_dssp ---BSSCHHHHHHTTE--EEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCE--EECCCCSTTTTST-TEECCSS
T ss_pred ---cCCCHHHHHhCCC--EEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCC--CccCCCCCCCCCC-cEEEECC
Confidence 0111233445566 4666 88888876444 677788888999999999998 888999888 322 2222111
Q ss_pred CCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHH
Q psy2398 165 YKSP-----DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAY 239 (433)
Q Consensus 165 ~~~~-----~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (433)
..+. ....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+. ++. ++. .+
T Consensus 129 ~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-~~~------------~~~---------~~ 186 (404)
T 3fg2_P 129 LDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-ARV------------VTP---------EI 186 (404)
T ss_dssp HHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-TTT------------SCH---------HH
T ss_pred HHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch-hhc------------cCH---------HH
Confidence 1111 11257899999999999999999999999999999886421 111 011 11
Q ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC-----eEEecCCceeeccEEEEcc
Q psy2398 240 IKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN-----IVHFVDDTHIEVDTIIYAT 314 (433)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~-----~v~~~dG~~~~~D~vi~at 314 (433)
.+.+.+.+. ..++ ++.....|+++... .|.++||+++++|.||+||
T Consensus 187 ~~~l~~~l~----~~GV-------------------------~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 187 SSYFHDRHS----GAGI-------------------------RMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGV 237 (404)
T ss_dssp HHHHHHHHH----HTTC-------------------------EEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECC
T ss_pred HHHHHHHHH----hCCc-------------------------EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECc
Confidence 111111111 1111 33334567777532 5788999999999999999
Q ss_pred CCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC----------hhhHHHHHHHHHHHHHhhhh
Q psy2398 315 GYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG----------LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 315 G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~----------~~~~a~~qa~~~a~~i~g~~ 380 (433)
|++|+.++++..++..++ ++.++. .+.++.|+||++|||+..+. .+..|..||+.+|.+|.|+.
T Consensus 238 G~~p~~~l~~~~gl~~~~-Gi~vd~-~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 238 GVIPNVEIAAAAGLPTAA-GIIVDQ-QLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp CEEECCHHHHHTTCCBSS-SEEECT-TSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred CCccCHHHHHhCCCCCCC-CEEECC-CcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 999999888766666654 355554 45788999999999986432 36889999999999999874
No 55
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=2.5e-31 Score=260.02 Aligned_cols=303 Identities=16% Similarity=0.195 Sum_probs=194.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (433)
+++||+|||||++|+++|..|++.|++|+|||+. .+||+|.+.. |.+...+.... .+.....+.+.... .
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g----ciP~k~l~~~a~~~~~~~~~~~~g~~~~~-~ 76 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVG----CVPKKVMWYASHLAEAVRDAPGFGVQASG-G 76 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHS----HHHHHHHHHHHHHHHHHHHGGGGTBCCC---
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcC----chhHHHHHHHHHHHHHHhhhhhcCcccCC-C
Confidence 4689999999999999999999999999999997 7899987542 22221110000 00000011110000 1
Q ss_pred CCCHHHHHHHH-----------HHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCC
Q psy2398 82 YPNHSMMLDYL-----------RSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 82 ~~~~~~~~~~l-----------~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
......+.++. ....++.++ .+..+ ++..++ .. .|++ ++.++.||+||+|||+ .|..|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--~~--~v~~-~g~~~~~d~lviAtGs--~p~~p~ 146 (463)
T 2r9z_A 77 TLDWPRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVD--AH--TIEV-EGQRLSADHIVIATGG--RPIVPR 146 (463)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEE--TT--EEEE-TTEEEEEEEEEECCCE--EECCCS
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEcc--CC--EEEE-CCEEEEcCEEEECCCC--CCCCCC
Confidence 12223333332 223344455 34444 333343 23 4555 5667999999999998 888999
Q ss_pred CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhh
Q psy2398 151 YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKF 230 (433)
Q Consensus 151 i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~ 230 (433)
++|. ..++++.++..... .+++++|||+|.+|+|+|..|.+.+.+|+++.+++.. ++.. +..+
T Consensus 147 i~G~--~~~~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~-l~~~-------------~~~~ 209 (463)
T 2r9z_A 147 LPGA--ELGITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL-LFQF-------------DPLL 209 (463)
T ss_dssp CTTG--GGSBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS-STTS-------------CHHH
T ss_pred CCCc--cceecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc-cccc-------------CHHH
Confidence 9882 12333333322222 3689999999999999999999999999999988642 2211 0111
Q ss_pred cCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----CeEEecCCc-ee
Q psy2398 231 SSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----NIVHFVDDT-HI 305 (433)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~~v~~~dG~-~~ 305 (433)
.. .+.+. +. ..++ ++.....++++.. ..+.++||+ ++
T Consensus 210 ~~-----~l~~~----l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~G~~~i 251 (463)
T 2r9z_A 210 SA-----TLAEN----MH----AQGI-------------------------ETHLEFAVAALERDAQGTTLVAQDGTRLE 251 (463)
T ss_dssp HH-----HHHHH----HH----HTTC-------------------------EEESSCCEEEEEEETTEEEEEETTCCEEE
T ss_pred HH-----HHHHH----HH----HCCC-------------------------EEEeCCEEEEEEEeCCeEEEEEeCCcEEE
Confidence 11 11111 11 0111 2333455666643 257788999 89
Q ss_pred eccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhhh
Q psy2398 306 EVDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 306 ~~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
++|.||+|||++|+.++|. ...+..+ .+++.+++. +.++.|+||++|||...+...+.|..||+.+|.++.|..
T Consensus 252 ~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 328 (463)
T 2r9z_A 252 GFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAY-QNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQ 328 (463)
T ss_dssp EESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTT-SBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred EcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCC-CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999998653 2344443 455666655 478999999999998766788899999999999998853
No 56
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=1.2e-31 Score=262.81 Aligned_cols=303 Identities=17% Similarity=0.197 Sum_probs=198.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----Ccc-cCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNT-QVPDYPMPDNYPV 81 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~ 81 (433)
++||+|||||++|+++|..|++.|++|+|||+. .+||.|.... +.++..+.... .+. .+..+..+ .. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g----~~psk~ll~~~~~~~~~~~~~~~~g~~-~~-~ 75 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVG----CIPSKALLRNAELVHIFTKDAKAFGIS-GE-V 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHS----HHHHHHHHHHHHHHHHHHHHTTTTTEE-EC-C
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccC----chhhHHHHHHHHHHHHHHHHHHhcCCC-CC-C
Confidence 379999999999999999999999999999998 7888876431 12211100000 000 00011111 00 0
Q ss_pred CCCH-----------HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCCC
Q psy2398 82 YPNH-----------SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 82 ~~~~-----------~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
.... ..+.+.+.+.+++.++ .++.++.+. .+.+.+.+.+.+| .++.||+||+|||+ .|..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~--~~~~ 148 (464)
T 2a8x_A 76 TFDYGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGS--STRL 148 (464)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCE--EECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCC--CCCC
Confidence 0111 1233344556666666 466555432 2457788888777 67999999999998 7788
Q ss_pred CCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhch
Q psy2398 149 PNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGN 228 (433)
Q Consensus 149 p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~ 228 (433)
|+++|. ...++++.+...... .+++++|||+|.+|+|+|..|.+.+.+|+++.|.+. ++|.. +.
T Consensus 149 ~~~~g~-~~~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------~~ 212 (464)
T 2a8x_A 149 VPGTSL-SANVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR-ALPNE-------------DA 212 (464)
T ss_dssp CTTCCC-BTTEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSTTS-------------CH
T ss_pred CCCCCC-CceEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc-ccccc-------------CH
Confidence 888871 223555444433333 468999999999999999999999999999998864 33321 11
Q ss_pred hhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEEec-CC-
Q psy2398 229 KFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVHFV-DD- 302 (433)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~~~-dG- 302 (433)
.+.. .+.+.+. ..++ ++.....++++.+. .+.+. +|
T Consensus 213 ~~~~-----~l~~~l~--------~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~~g~ 254 (464)
T 2a8x_A 213 DVSK-----EIEKQFK--------KLGV-------------------------TILTATKVESIADGGSQVTVTVTKDGV 254 (464)
T ss_dssp HHHH-----HHHHHHH--------HHTC-------------------------EEECSCEEEEEEECSSCEEEEEESSSC
T ss_pred HHHH-----HHHHHHH--------HcCC-------------------------EEEeCcEEEEEEEcCCeEEEEEEcCCc
Confidence 1111 1111111 0111 23334456666421 24454 67
Q ss_pred -ceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhh
Q psy2398 303 -THIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 303 -~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g 378 (433)
+++++|.||+|+|++|+.+++ +...+..+ .+++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|.++.|
T Consensus 255 ~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 255 AQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDY-MRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp EEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTT-SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcC-CccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 579999999999999999885 33344443 356777665 4689999999999998777788999999999999998
No 57
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=3.9e-31 Score=259.57 Aligned_cols=332 Identities=18% Similarity=0.229 Sum_probs=201.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcC-----CCeEEEccCCCCCCcccCCCCCCccccceEeec-----------CCCcccC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGN-----INYDLYEMESDLGGVWNSQASCGRVYPSLHLIS-----------PKFNTQV 70 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g-----~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 70 (433)
++||+|||||++|+++|..|++.| ++|+|||+.+.+| |.... ..+...+.. +...+.|
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~~ 103 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNT----LVSQSELQISFLKDLVSLRNPTSPYSF 103 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGG----CCSSCBCSSCTTSSSSTTTCTTCTTSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCC----CCCCCcCCcchhhccccccCCCCCCCh
Confidence 469999999999999999999999 9999999999887 54421 111111111 1111111
Q ss_pred CCCC--------CCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe---CCeE--EEEEccCc----EEEe
Q psy2398 71 PDYP--------MPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY---EDIW--EVELSNGK----KKKY 133 (433)
Q Consensus 71 ~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~---~~~~--~v~~~~g~----~~~~ 133 (433)
..+. ++.+...++.+.++.+|++.++++++. .++++++|+.|+.+ ++.| .|++.++. ++.|
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~ 181 (463)
T 3s5w_A 104 VNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT 181 (463)
T ss_dssp HHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE
T ss_pred hHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe
Confidence 0000 001112456789999999999999886 69999999999986 4555 67776665 7999
Q ss_pred CEEEEccCCCCCCCCCCCCCCCCC--ceeccCCCCCC-CCC-----CCCeEEEEcCCCCHHHHHHHHhcc--CCcEEEEE
Q psy2398 134 DFIAVCNGAQRVARYPNYSGYFSG--EILHSMDYKSP-DQI-----RNKRVLVVGAGNSGCDIAVDASHH--SEKVYHST 203 (433)
Q Consensus 134 d~vIvAtG~~s~p~~p~i~g~~~g--~~~~~~~~~~~-~~~-----~~~~v~VvG~G~sg~d~a~~l~~~--~~~V~~~~ 203 (433)
|+||+|||+ .|.+|+....+.+ .++|+..+... ..+ ++++|+|||+|.+|+|+|.+|++. +.+|++++
T Consensus 182 d~lVlAtG~--~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~ 259 (463)
T 3s5w_A 182 RALVVSPGG--TPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMIL 259 (463)
T ss_dssp SEEEECCCC--EECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred CEEEECCCC--CCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEE
Confidence 999999998 7888863223445 67888776542 333 589999999999999999999998 99999999
Q ss_pred ecCceeecccCCCCChh---------HHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChh-
Q psy2398 204 RRGYHYYPKFIDGKPTP---------QWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQ- 273 (433)
Q Consensus 204 r~~~~~~p~~~~~~~~~---------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 273 (433)
|++. ++|... .+.. .++..++...+. .+.+. .... .+. .++.+
T Consensus 260 r~~~-~~p~~~--~~~~~~~~~p~~~~~~~~l~~~~~~-----~~~~~----~~~~--~~~-------------~~~~~~ 312 (463)
T 3s5w_A 260 RASA-LKPADD--SPFVNEVFAPKFTDLIYSREHAERE-----RLLRE----YHNT--NYS-------------VVDTDL 312 (463)
T ss_dssp SSSS-CCBCCC--CHHHHGGGSHHHHHHHHHSCHHHHH-----HHHHH----TGGG--TSS-------------CBCHHH
T ss_pred eCCC-CcCccC--CccchhccChhHHHHHhcCCHHHHH-----HHHHH----hhcc--CCC-------------cCCHHH
Confidence 9886 344321 1100 001111111111 11111 0000 000 00000
Q ss_pred --------hhhcc-cCCCeee--cCCceeeeC--Ce--EEec---CCce--eeccEEEEccCCCCC--CCCCCccccccc
Q psy2398 274 --------ILYHI-GHGDILP--KDDIKNLNG--NI--VHFV---DDTH--IEVDTIIYATGYNRH--FPFIDKEKLEWK 331 (433)
Q Consensus 274 --------~~~~~-~~~~v~~--~~~v~~~~~--~~--v~~~---dG~~--~~~D~vi~atG~~~~--~~~l~~~~~~~~ 331 (433)
+...+ ...++.+ ...|+++.. .. +.+. +|+. +++|.||+|||++|+ .++|+......
T Consensus 313 ~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~- 391 (463)
T 3s5w_A 313 IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL- 391 (463)
T ss_dssp HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-
Confidence 00001 1123443 334555542 22 5555 7765 899999999999999 67776432211
Q ss_pred CCccccccccccCC----CCcEEEEcccccc-----CChhhHHHHHHHHHHHHHh
Q psy2398 332 LGIPDLFIHIAPRN----LDNIFFFGFVNAA-----AGLGDGLRLQGQFIRSYIQ 377 (433)
Q Consensus 332 ~~~~~~~~~~~~~~----~p~i~~iG~~~~~-----~~~~~~a~~qa~~~a~~i~ 377 (433)
+.+.+..++.... .|+||++|||... +.+-..+..+++.++..+.
T Consensus 392 -g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 392 -GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp -C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred -CCcccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 4555555443332 5679999998742 2233345566665544443
No 58
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=2.3e-31 Score=260.73 Aligned_cols=303 Identities=14% Similarity=0.099 Sum_probs=195.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 81 (433)
.++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.+.. |.+...+..+ ..+..+..+.+....+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~g----cip~k~l~~~~~~~~~~~~~~~~g~~~~~~- 77 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRG----CVPKKLYVYASQFAEHFEDAAGFGWTVGES- 77 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHS----HHHHHHHHHHHHHHHHHHHGGGGTEEECCC-
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccC----chhhHHHHHHHHHHHHHHHHHhcCcccCCC-
Confidence 458999999999999999999999999999999 67999887532 2222110000 0000011111100000
Q ss_pred CCCHH-----------HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-ccCcEEEeCEEEEccCCCCCCC-C
Q psy2398 82 YPNHS-----------MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-SNGKKKKYDFIAVCNGAQRVAR-Y 148 (433)
Q Consensus 82 ~~~~~-----------~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~~~~~d~vIvAtG~~s~p~-~ 148 (433)
..... .+..++....+..++ .+..+ ++..++ ...+.+ .++..+.||+||+|||+ .|. .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~----~~~v~~~~~~~~~~~d~lviAtG~--~p~~~ 148 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELAG----PNTVKLLASGKTVTAERIVIAVGG--HPSPH 148 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEESS----SSEEEETTTTEEEEEEEEEECCCE--EECCC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEee----CCEEEEecCCeEEEeCEEEEecCC--CcccC
Confidence 11112 223334444455555 23333 333332 235555 46678999999999998 888 8
Q ss_pred CCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhch
Q psy2398 149 PNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGN 228 (433)
Q Consensus 149 p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~ 228 (433)
|+++|.. .+.++.++..... .+++++|||+|.+|+|+|..+.+.+.+|+++.+.+... |.. +.
T Consensus 149 p~i~G~~--~~~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-~~~-------------~~ 211 (463)
T 4dna_A 149 DALPGHE--LCITSNEAFDLPA-LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-SRF-------------DQ 211 (463)
T ss_dssp TTSTTGG--GCBCHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTS-------------CH
T ss_pred CCCCCcc--ccccHHHHhhhhc-CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-ccc-------------CH
Confidence 9999821 2333333333322 37899999999999999999999999999999886422 211 11
Q ss_pred hhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC-----eEE-ecCC
Q psy2398 229 KFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN-----IVH-FVDD 302 (433)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~-----~v~-~~dG 302 (433)
.+.. .+.+. +. ..++ ++.....|+++... .|. +++|
T Consensus 212 ~~~~-----~l~~~----l~----~~Gv-------------------------~i~~~~~v~~i~~~~~~~~~v~~~~~g 253 (463)
T 4dna_A 212 DMRR-----GLHAA----ME----EKGI-------------------------RILCEDIIQSVSADADGRRVATTMKHG 253 (463)
T ss_dssp HHHH-----HHHHH----HH----HTTC-------------------------EEECSCCEEEEEECTTSCEEEEESSSC
T ss_pred HHHH-----HHHHH----HH----HCCC-------------------------EEECCCEEEEEEEcCCCEEEEEEcCCC
Confidence 1111 11111 11 0111 33334566666431 467 7888
Q ss_pred ceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 303 THIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 303 ~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+ +++|.||+|||++|+.++| +...+..+ ++++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|.++.|.
T Consensus 254 ~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 254 E-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAF-SRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp E-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTT-CBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSS
T ss_pred e-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcC-CCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 8 9999999999999999884 44455553 455666655 46899999999999987778889999999999999986
Q ss_pred h
Q psy2398 380 I 380 (433)
Q Consensus 380 ~ 380 (433)
.
T Consensus 332 ~ 332 (463)
T 4dna_A 332 N 332 (463)
T ss_dssp C
T ss_pred C
Confidence 4
No 59
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=2.2e-31 Score=260.62 Aligned_cols=302 Identities=14% Similarity=0.131 Sum_probs=194.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCC----cccCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF----NTQVPDYPMPDNYPVY 82 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 82 (433)
++||+|||||++|+++|..|++.|.+|+|||+.+ +||+|.+.. |.++..+..... +..+..+..+ .. ..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g----~iP~k~l~~~~~~~~~~~~~~~~g~~-~~-~~ 78 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVG----CIPTKALLHAAETLHHLKVAEGFGLK-AK-PE 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTS----HHHHHHHHHHHHHHHHHHHHGGGTEE-CC-CE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcC----hHHHHHHHHHHHHHHHHHhHHhcCCC-CC-CC
Confidence 4899999999999999999999999999999987 999987542 222211110000 0000001111 00 01
Q ss_pred CCHHHH-------HHH----HHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCC-
Q psy2398 83 PNHSMM-------LDY----LRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPN- 150 (433)
Q Consensus 83 ~~~~~~-------~~~----l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~- 150 (433)
.....+ .++ +...+++.++ .+..++.+ .+ +.+ ++++. +.++.||+||+|||+ .|..|+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~-~~--~~~--~v~v~-g~~~~~d~lViATGs--~p~~p~g 148 (464)
T 2eq6_A 79 LDLKKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFAR-LV--GPK--EVEVG-GERYGAKSLILATGS--EPLELKG 148 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCEE-EE--ETT--EEEET-TEEEEEEEEEECCCE--EECCBTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeEE-Ec--cCC--EEEEc-cEEEEeCEEEEcCCC--CCCCCCC
Confidence 112222 222 2344555666 45656543 23 234 34444 567999999999998 788775
Q ss_pred CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhh
Q psy2398 151 YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKF 230 (433)
Q Consensus 151 i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~ 230 (433)
+++ .+.++++.++.......+++++|||+|.+|+|+|..|++.+.+|+++.+.+. ++|.. +..+
T Consensus 149 i~~--~~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~l~~~-------------~~~~ 212 (464)
T 2eq6_A 149 FPF--GEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE-ILPQG-------------DPET 212 (464)
T ss_dssp BCC--SSSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSTTS-------------CHHH
T ss_pred CCC--CCcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc-ccccc-------------CHHH
Confidence 665 2246666655555443578999999999999999999999999999998864 22211 0111
Q ss_pred cCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C--eEEec-C--Cc
Q psy2398 231 SSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N--IVHFV-D--DT 303 (433)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~--~v~~~-d--G~ 303 (433)
.. .+.+. +. ..++ ++.....+++++. . .+.+. + |+
T Consensus 213 ~~-----~l~~~----l~----~~gV-------------------------~i~~~~~v~~i~~~~~~~~v~~~~~~~g~ 254 (464)
T 2eq6_A 213 AA-----LLRRA----LE----KEGI-------------------------RVRTKTKAVGYEKKKDGLHVRLEPAEGGE 254 (464)
T ss_dssp HH-----HHHHH----HH----HTTC-------------------------EEECSEEEEEEEEETTEEEEEEEETTCCS
T ss_pred HH-----HHHHH----HH----hcCC-------------------------EEEcCCEEEEEEEeCCEEEEEEeecCCCc
Confidence 11 11111 11 0111 2222334555542 2 35565 6 87
Q ss_pred --eeeccEEEEccCCCCCCCCC--Ccccccc-cCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhh
Q psy2398 304 --HIEVDTIIYATGYNRHFPFI--DKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 304 --~~~~D~vi~atG~~~~~~~l--~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g 378 (433)
++++|.||+|+|++|+.+++ +...+.. .++++.+++. +.++.|+||++|||+..+.+.+.|..||+.+|.++.|
T Consensus 255 ~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 255 GEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNAR-METSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTT-CBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred eeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 79999999999999999875 3334444 3455766655 5789999999999998777888999999999999998
Q ss_pred hh
Q psy2398 379 FI 380 (433)
Q Consensus 379 ~~ 380 (433)
..
T Consensus 334 ~~ 335 (464)
T 2eq6_A 334 KD 335 (464)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 60
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=4.4e-31 Score=259.96 Aligned_cols=308 Identities=16% Similarity=0.161 Sum_probs=197.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-cCCCeEEEc--------cCCCCCCcccCCCCCCccccceEeecCCC----cccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE-GNINYDLYE--------MESDLGGVWNSQASCGRVYPSLHLISPKF----NTQVPD 72 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e--------~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 72 (433)
.++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.+.. |.|+..+..... +.....
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~g----ciPsk~l~~~a~~~~~~~~~~~ 77 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVG----CVPKKLMVTGANYMDTIRESAG 77 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHS----HHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCC----cchhhHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999 999999999 3567999987642 233211110000 000000
Q ss_pred CCCCCCCC-CCCCHHHHHH-----------HHHHHHHHc-CCCcceEeCcEEEEEEEeCCeEEEEE---ccC---cEEEe
Q psy2398 73 YPMPDNYP-VYPNHSMMLD-----------YLRSYAKKF-DVYNHSIFNTEVINLEQYEDIWEVEL---SNG---KKKKY 133 (433)
Q Consensus 73 ~~~~~~~~-~~~~~~~~~~-----------~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~v~~---~~g---~~~~~ 133 (433)
+.+..... .......+.+ ++....++. ++ .+..++ +..++ .+.+.+.. .++ ..+.|
T Consensus 78 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g~-~~~i~--~~~v~v~~~~~~~g~~~~~~~~ 152 (490)
T 1fec_A 78 FGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQGF-GALQD--NHTVLVRESADPNSAVLETLDT 152 (490)
T ss_dssp GTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEeE-EEEee--CCEEEEEeeccCCCCceEEEEc
Confidence 10000000 0012223332 223333444 55 344443 55553 45555543 255 57999
Q ss_pred CEEEEccCCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhcc---CCcEEEEEecCceee
Q psy2398 134 DFIAVCNGAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHH---SEKVYHSTRRGYHYY 210 (433)
Q Consensus 134 d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~---~~~V~~~~r~~~~~~ 210 (433)
|+||+|||+ .|..|+++|. ..++++.++..... .+++++|||+|.+|+|+|..|.+. +.+|+++.+.+. ++
T Consensus 153 d~lviAtGs--~p~~p~i~g~--~~~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~-~l 226 (490)
T 1fec_A 153 EYILLATGS--WPQHLGIEGD--DLCITSNEAFYLDE-APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM-IL 226 (490)
T ss_dssp EEEEECCCE--EECCCCSBTG--GGCBCHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS-SS
T ss_pred CEEEEeCCC--CCCCCCCCCc--cceecHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC-cc
Confidence 999999998 8888988882 12333333333332 368999999999999999999999 999999998874 22
Q ss_pred cccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCce
Q psy2398 211 PKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIK 290 (433)
Q Consensus 211 p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~ 290 (433)
|.. +..+.. .+.+.+. ..++ ++.....+.
T Consensus 227 ~~~-------------d~~~~~-----~l~~~l~--------~~GV-------------------------~i~~~~~v~ 255 (490)
T 1fec_A 227 RGF-------------DSELRK-----QLTEQLR--------ANGI-------------------------NVRTHENPA 255 (490)
T ss_dssp TTS-------------CHHHHH-----HHHHHHH--------HTTE-------------------------EEEETCCEE
T ss_pred ccc-------------CHHHHH-----HHHHHHH--------hCCC-------------------------EEEeCCEEE
Confidence 321 111111 1111111 0111 333455666
Q ss_pred eeeC-----CeEEecCCceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChh
Q psy2398 291 NLNG-----NIVHFVDDTHIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLG 362 (433)
Q Consensus 291 ~~~~-----~~v~~~dG~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~ 362 (433)
++.. ..|.++||+++++|.||+|+|++|+.++| +..++..+ .+++.+++. +.++.|+||++|||+..+..+
T Consensus 256 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~-~~t~~~~IyA~GD~~~~~~l~ 334 (490)
T 1fec_A 256 KVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAY-SKTNVDNIYAIGDVTDRVMLT 334 (490)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTT-CBCSSTTEEECGGGGCSCCCH
T ss_pred EEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCC-CccCCCCEEEEeccCCCccCH
Confidence 6642 25678899899999999999999998854 44445554 456666655 578999999999999766788
Q ss_pred hHHHHHHHHHHHHHhhhh
Q psy2398 363 DGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 363 ~~a~~qa~~~a~~i~g~~ 380 (433)
+.|..||+.+|.+|.|..
T Consensus 335 ~~A~~~g~~aa~~i~g~~ 352 (490)
T 1fec_A 335 PVAINEGAAFVDTVFANK 352 (490)
T ss_dssp HHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 899999999999999853
No 61
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=6.2e-31 Score=251.54 Aligned_cols=289 Identities=17% Similarity=0.167 Sum_probs=195.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.++||+|||||++|+++|..|++.| .+|+++|++. |+.|... .++. ......
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~-----~l~~-------------------~~~~~~ 56 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKP-----MLST-------------------GFSKNK 56 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGG-----GGGG-------------------TTTTTC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcc-----cccH-------------------HHhCCC
Confidence 4589999999999999999999998 4689999865 3222211 0000 000112
Q ss_pred CHHHHH-HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceecc
Q psy2398 84 NHSMML-DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHS 162 (433)
Q Consensus 84 ~~~~~~-~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~ 162 (433)
...++. .++..+++++++ .+.++++|..++.+. ++|++.+ ..+.||+||+|||+ .|..|+++|.....++++
T Consensus 57 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~--~~v~~~~-~~~~~d~lviAtG~--~p~~p~i~g~~~~~v~~~ 129 (384)
T 2v3a_A 57 DADGLAMAEPGAMAEQLNA--RILTHTRVTGIDPGH--QRIWIGE-EEVRYRDLVLAWGA--EPIRVPVEGDAQDALYPI 129 (384)
T ss_dssp CHHHHEEECHHHHHHHTTC--EEECSCCCCEEEGGG--TEEEETT-EEEECSEEEECCCE--EECCCCCBSTTTTCEEEC
T ss_pred CHHHhhccCHHHHHHhCCc--EEEeCCEEEEEECCC--CEEEECC-cEEECCEEEEeCCC--CcCCCCCCCcCcCCEEEE
Confidence 233332 245666677777 477788888887643 3566654 46999999999998 888999988322345554
Q ss_pred CCCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHH
Q psy2398 163 MDYKSPD-----QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETM 237 (433)
Q Consensus 163 ~~~~~~~-----~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~ 237 (433)
..+.+.. ...+++++|||+|.+|+|+|..+.+.+.+|+++.+.+. ++++. ++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~~------------~~~--------- 187 (384)
T 2v3a_A 130 NDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ-VMPGL------------LHP--------- 187 (384)
T ss_dssp SSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS-SSTTT------------SCH---------
T ss_pred CCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc-hhhcc------------cCH---------
Confidence 4432211 12378999999999999999999999999999998764 22211 011
Q ss_pred HHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C--eEEecCCceeeccEEEEc
Q psy2398 238 AYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N--IVHFVDDTHIEVDTIIYA 313 (433)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~--~v~~~dG~~~~~D~vi~a 313 (433)
.+.+.+.+.+. ..++ ++.....+.++.. . .+.+.||+++++|.||+|
T Consensus 188 ~~~~~l~~~l~----~~gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 188 AAAKAVQAGLE----GLGV-------------------------RFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHHHHHH----TTTC-------------------------EEEESCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHH----HcCC-------------------------EEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEEC
Confidence 11111111111 1111 3344556666642 2 567889999999999999
Q ss_pred cCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccC----ChhhHHHHHHHHHHHHHhhhh
Q psy2398 314 TGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAA----GLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 314 tG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~----~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+|++|+.++++...+..+++ +.++.. +.++.|+||++|||+... ..+..|..||+.+|.+|.|..
T Consensus 239 ~G~~p~~~l~~~~g~~~~~g-i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~ 307 (384)
T 2v3a_A 239 VGLRPRTELAFAAGLAVNRG-IVVDRS-LRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP 307 (384)
T ss_dssp SCEEECCHHHHHTTCCBSSS-EEECTT-CBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcCHHHHHHCCCCCCCC-EEECCC-CCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 99999988776555655544 666554 578999999999998521 246678999999999999863
No 62
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=2.6e-31 Score=259.83 Aligned_cols=304 Identities=18% Similarity=0.143 Sum_probs=197.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCC----CcccCCCCCCCCCCCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPK----FNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 83 (433)
+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... |.++..+.... .+.. ..+..+... ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g----~~p~k~l~~~~~~~~~~~~-~~~g~~~~~-~~~ 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVG----CIPSKALLETTERIYEAKK-GLLGAKVKG-VEL 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHS----HHHHHHHHHHHHHHHHHHH-CCTTEEECC-EEE
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceec----chhHHHHHHHHHHHHHHhh-hcCCcccCC-Ccc
Confidence 7999999999999999999999999999999988999987542 22221110000 0000 001100000 001
Q ss_pred CHHHHH-----------HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCC
Q psy2398 84 NHSMML-----------DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYS 152 (433)
Q Consensus 84 ~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~ 152 (433)
....+. ..+...+++.++ .+..++.+ .+ +.+.+.|.+ ++.++.||+||+|||+ .|..|+++
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i--~~~~~~v~~-~g~~~~~d~lviAtG~--~p~~~~~~ 147 (455)
T 2yqu_A 76 DLPALMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTAR-FL--SERKVLVEE-TGEELEARYILIATGS--APLIPPWA 147 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEE-ES--SSSEEEETT-TCCEEEEEEEEECCCE--EECCCTTB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEE-Ee--cCCeEEEee-CCEEEEecEEEECCCC--CCCCCCCC
Confidence 122222 223444555566 35555433 22 345566655 5678999999999998 78888888
Q ss_pred CCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcC
Q psy2398 153 GYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSS 232 (433)
Q Consensus 153 g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~ 232 (433)
|.....++++.++..... .+++++|||+|.+|+|+|..|.+.+.+|+++.+++.. +|.. +..+..
T Consensus 148 g~~~~~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~-l~~~-------------~~~~~~ 212 (455)
T 2yqu_A 148 QVDYERVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI-LPTM-------------DLEVSR 212 (455)
T ss_dssp CCCSSSEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS-CTTS-------------CHHHHH
T ss_pred CCCcCcEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc-cccc-------------CHHHHH
Confidence 721224556555544433 3689999999999999999999999999999988642 2311 011111
Q ss_pred chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee--CCe--EEecCCceeecc
Q psy2398 233 KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN--GNI--VHFVDDTHIEVD 308 (433)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~--~~~--v~~~dG~~~~~D 308 (433)
.+.+.+. ..++ ++.....+++++ +.. +.+++|+++++|
T Consensus 213 -----~l~~~l~--------~~Gv-------------------------~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D 254 (455)
T 2yqu_A 213 -----AAERVFK--------KQGL-------------------------TIRTGVRVTAVVPEAKGARVELEGGEVLEAD 254 (455)
T ss_dssp -----HHHHHHH--------HHTC-------------------------EEECSCCEEEEEEETTEEEEEETTSCEEEES
T ss_pred -----HHHHHHH--------HCCC-------------------------EEEECCEEEEEEEeCCEEEEEECCCeEEEcC
Confidence 1111111 0011 333345666664 223 455688899999
Q ss_pred EEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 309 TIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 309 ~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
.||+|||++|+.+++ +...+... .+.+.+++. +.++.|+||++||+...+.+.+.|..||+.+|.++.|.
T Consensus 255 ~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 255 RVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEH-LRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp EEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTT-SBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEECcCCCcCCCCCChhhcCCccCCCCcEeECCC-cccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 999999999998874 43344443 355666655 56889999999999987777889999999999999985
No 63
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.97 E-value=1.3e-30 Score=256.65 Aligned_cols=305 Identities=16% Similarity=0.157 Sum_probs=194.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 81 (433)
..+||+|||||++|+++|..|++.|++|+|||+ ..+||+|.+.. |.+...+... ..+..+..+.+....+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~g----cip~k~l~~~a~~~~~~~~~~~~g~~~~~~- 98 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRG----CVPKKLYFYASQYAQEFSKSIGFGWKYADP- 98 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHS----HHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccC----ccccHHHHHHHHHHHHHHHHHhCCcccCCC-
Confidence 457999999999999999999999999999999 67999887642 2222111100 0000011111110001
Q ss_pred CCCHH-----------HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-cCcEEEeCEEEEccCCCCCCC-C
Q psy2398 82 YPNHS-----------MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-NGKKKKYDFIAVCNGAQRVAR-Y 148 (433)
Q Consensus 82 ~~~~~-----------~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~g~~~~~d~vIvAtG~~s~p~-~ 148 (433)
..... .+.+++....+..++ .+..+ .+..++ .. .+.+. ++..+.||+||+|||+ .|. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~--~~--~v~v~~~~~~~~~d~lviAtG~--~p~~~ 169 (484)
T 3o0h_A 99 IFNWEKLVAAKNKEISRLEGLYREGLQNSNV--HIYES-RAVFVD--EH--TLELSVTGERISAEKILIATGA--KIVSN 169 (484)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEE--TT--EEEETTTCCEEEEEEEEECCCE--EECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEee--CC--EEEEecCCeEEEeCEEEEccCC--CcccC
Confidence 11111 233334444555565 24333 444443 23 45554 6678999999999998 788 8
Q ss_pred CCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhch
Q psy2398 149 PNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGN 228 (433)
Q Consensus 149 p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~ 228 (433)
|+++|. ..+.++..+..... .+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.. ++.. +.
T Consensus 170 p~i~G~--~~~~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~-l~~~-------------~~ 232 (484)
T 3o0h_A 170 SAIKGS--DLCLTSNEIFDLEK-LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI-LRNF-------------DY 232 (484)
T ss_dssp --CBTG--GGSBCTTTGGGCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS-STTS-------------CH
T ss_pred CCCCCc--cccccHHHHHhHHh-cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc-cccc-------------CH
Confidence 888881 12333333333322 4789999999999999999999999999999988642 2211 11
Q ss_pred hhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC----eEEecCCce
Q psy2398 229 KFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN----IVHFVDDTH 304 (433)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~----~v~~~dG~~ 304 (433)
.+.. .+.+.+.+ .++ ++.....|+++... .+.+.+|++
T Consensus 233 ~~~~-----~l~~~l~~--------~Gv-------------------------~i~~~~~V~~i~~~~~~v~v~~~~g~~ 274 (484)
T 3o0h_A 233 DLRQ-----LLNDAMVA--------KGI-------------------------SIIYEATVSQVQSTENCYNVVLTNGQT 274 (484)
T ss_dssp HHHH-----HHHHHHHH--------HTC-------------------------EEESSCCEEEEEECSSSEEEEETTSCE
T ss_pred HHHH-----HHHHHHHH--------CCC-------------------------EEEeCCEEEEEEeeCCEEEEEECCCcE
Confidence 1111 11111110 011 23334566666432 577889999
Q ss_pred eeccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhhhc
Q psy2398 305 IEVDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAFIR 381 (433)
Q Consensus 305 ~~~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~~ 381 (433)
+++|.||+|||++|+..+|. ...+..+ .+++.++.. +.++.|+||++|||+..+.+.+.|..||+.+|.++.|...
T Consensus 275 i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~ 353 (484)
T 3o0h_A 275 ICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEK-MTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTS 353 (484)
T ss_dssp EEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTT-SBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC---
T ss_pred EEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCC-CCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999998854 3344443 355666544 5689999999999998777888999999999999998643
No 64
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=3.2e-31 Score=258.46 Aligned_cols=303 Identities=19% Similarity=0.168 Sum_probs=193.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCC----cc-cCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF----NT-QVPDYPMPDNYP 80 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~ 80 (433)
.++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.+.. |.+...+..... +. ....+.++...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~g----ciP~k~l~~~a~~~~~~~~~~~~~g~~~~~- 76 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVG----CVPKKVMWHAAQIREAIHMYGPDYGFDTTI- 76 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHS----HHHHHHHHHHHHHHHHHHTTGGGGTEEEEE-
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccC----ccChHHHHHHHHHHHHHHHHHHhcCccCCC-
Confidence 4589999999999999999999999999999997 7899987531 222211100000 00 00000000000
Q ss_pred CCCCHHHHHHH-----------HHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 81 VYPNHSMMLDY-----------LRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 81 ~~~~~~~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.......+.++ +....++.++ .+..++ ++.++ .. .|.+ ++..+.||+||+|||+ .|..|
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~i~--~~--~v~~-~g~~~~~d~lviAtGs--~p~~p 146 (450)
T 1ges_A 77 NKFNWETLIASRTAYIDRIHTSYENVLGKNNV--DVIKGF-ARFVD--AK--TLEV-NGETITADHILIATGG--RPSHP 146 (450)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CEEEE--TT--EEEE-TTEEEEEEEEEECCCE--EECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEec--CC--EEEE-CCEEEEeCEEEECCCC--CCCCC
Confidence 01112223222 2233344555 344443 33443 33 4545 5677999999999998 88899
Q ss_pred CCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchh
Q psy2398 150 NYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNK 229 (433)
Q Consensus 150 ~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~ 229 (433)
+++|. ....++.++..... .+++++|||+|.+|+|+|..|++.+.+|+++.+.+.. +|.. +..
T Consensus 147 ~i~g~--~~~~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~-------------~~~ 209 (450)
T 1ges_A 147 DIPGV--EYGIDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP-LPSF-------------DPM 209 (450)
T ss_dssp CSTTG--GGSBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS-STTS-------------CHH
T ss_pred CCCCc--cceecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch-hhhh-------------hHH
Confidence 99882 12233333322222 3689999999999999999999999999999987642 2211 111
Q ss_pred hcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC-----CeEEecCCce
Q psy2398 230 FSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG-----NIVHFVDDTH 304 (433)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~-----~~v~~~dG~~ 304 (433)
+.. .+.+.+. ..++ ++.....+.++.. ..+.++||++
T Consensus 210 ~~~-----~l~~~l~--------~~Gv-------------------------~i~~~~~v~~i~~~~~~~~~v~~~~g~~ 251 (450)
T 1ges_A 210 ISE-----TLVEVMN--------AEGP-------------------------QLHTNAIPKAVVKNTDGSLTLELEDGRS 251 (450)
T ss_dssp HHH-----HHHHHHH--------HHSC-------------------------EEECSCCEEEEEECTTSCEEEEETTSCE
T ss_pred HHH-----HHHHHHH--------HCCC-------------------------EEEeCCEEEEEEEeCCcEEEEEECCCcE
Confidence 111 1111111 0111 2333445666642 2577889999
Q ss_pred eeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhhh
Q psy2398 305 IEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 305 ~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
+++|.||+|+|++|+.++| +...+..+ .+++.+++.+ .++.|+||++|||...+..++.|..||+.+|.+|.|..
T Consensus 252 i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 329 (450)
T 1ges_A 252 ETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQ-NTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNK 329 (450)
T ss_dssp EEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTS-BCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred EEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCC-ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999865 33344443 4556666654 78999999999998766788899999999999998853
No 65
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=4.8e-31 Score=258.82 Aligned_cols=305 Identities=17% Similarity=0.180 Sum_probs=193.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCc----ccCCCC-CCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFN----TQVPDY-PMPDNYP 80 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~ 80 (433)
.++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+.. |+++..+...... ...+.+ ..+....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g----~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 77 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVG----CVPSKIMIRAAHIAHLRRESPFDGGIAATVP 77 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHS----HHHHHHHHHHHHHHHHHHCCTTTTTSCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCC----ccchHHHHHHHHHHHHHhhhhhcCCccCCCC
Confidence 4689999999999999999999999999999998 7999987642 2222111000000 000110 0110001
Q ss_pred CCCCHHHHH-------HHHH-----HHHHHc-CCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCC
Q psy2398 81 VYPNHSMML-------DYLR-----SYAKKF-DVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 81 ~~~~~~~~~-------~~l~-----~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~ 145 (433)
......+. ++++ ...++. ++ .+..+ ++..++ .+.+.|.+.+| .++.||+||+|||+ .
T Consensus 78 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs--~ 149 (467)
T 1zk7_A 78 -TIDRSKLLAQQQARVDELRHAKYEGILGGNPAI--TVVHG-EARFKD--DQSLTVRLNEGGERVVMFDRCLVATGA--S 149 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEEE-EEEEEE--TTEEEEEETTSSEEEEECSEEEECCCE--E
T ss_pred -ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEEE-EEEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCC--C
Confidence 11122222 2232 122222 33 23322 344443 56788888777 67999999999997 8
Q ss_pred CCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHh
Q psy2398 146 ARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQ 225 (433)
Q Consensus 146 p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 225 (433)
|..|+++|.....++++.+...... .+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.. +| .
T Consensus 150 p~~p~i~G~~~~~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~-~------------ 214 (467)
T 1zk7_A 150 PAVPPIPGLKESPYWTSTEALASDT-IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF-FR-E------------ 214 (467)
T ss_dssp ECCCCCTTTTTSCCBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT-TT-S------------
T ss_pred CCCCCCCCCCcCceecHHHHhcccc-cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc-CC-C------------
Confidence 8999999821112344433333222 3789999999999999999999999999999988642 22 1
Q ss_pred hchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee--CC--eEEecC
Q psy2398 226 LGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN--GN--IVHFVD 301 (433)
Q Consensus 226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~--~~--~v~~~d 301 (433)
+. .+.+.+.+.+. ..++ ++.....|.++. +. .+.++
T Consensus 215 -~~---------~~~~~l~~~l~----~~Gv-------------------------~i~~~~~v~~i~~~~~~~~v~~~- 254 (467)
T 1zk7_A 215 -DP---------AIGEAVTAAFR----AEGI-------------------------EVLEHTQASQVAHMDGEFVLTTT- 254 (467)
T ss_dssp -CH---------HHHHHHHHHHH----HTTC-------------------------EEETTCCEEEEEEETTEEEEEET-
T ss_pred -CH---------HHHHHHHHHHH----hCCC-------------------------EEEcCCEEEEEEEeCCEEEEEEC-
Confidence 01 11111111111 0111 233344566654 22 24444
Q ss_pred CceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhh
Q psy2398 302 DTHIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 302 G~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g 378 (433)
+.++++|.||+|+|++|+..++ +...+..+ ++.+.+++. +.++.|+||++|||+..+...+.|..||+.+|.++.+
T Consensus 255 ~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 255 HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQG-MRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTT-CBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTT
T ss_pred CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 5679999999999999998764 33344443 345666554 5789999999999998777788999999999999987
Q ss_pred h
Q psy2398 379 F 379 (433)
Q Consensus 379 ~ 379 (433)
.
T Consensus 334 ~ 334 (467)
T 1zk7_A 334 G 334 (467)
T ss_dssp C
T ss_pred C
Confidence 5
No 66
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=2.9e-31 Score=262.92 Aligned_cols=308 Identities=16% Similarity=0.138 Sum_probs=192.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC--------CCCCcccCCCCCCccccceEeecCCC----cccCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES--------DLGGVWNSQASCGRVYPSLHLISPKF----NTQVPDY 73 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~--------~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 73 (433)
..+||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|.+.. |.|...+..+.. ...+..+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G----ciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG----CIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS----HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC----ccchHHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999999999999854 6899887652 333222111100 0011111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHH-----------HHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc--EEEeCEEEEcc
Q psy2398 74 PMPDNYPVYPNHSMMLDYLRSYA-----------KKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK--KKKYDFIAVCN 140 (433)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~--~~~~d~vIvAt 140 (433)
..............+.++.+.+. +..++ .+ +...+..++ .+.+.|.+.+|+ ++.||+||+||
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV--~~-i~g~a~~~d--~~~v~v~~~~g~~~~i~~d~lViAT 181 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKV--VY-ENAYGQFIG--PHRIKATNNKGKEKIYSAERFLIAT 181 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECSEEEEEE--TTEEEEECTTCCCCEEEEEEEEECC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEEEEEEee--CCEEEEEcCCCCEEEEECCEEEEEC
Confidence 11111111233444444444333 23344 12 233444433 466777776664 79999999999
Q ss_pred CCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChh
Q psy2398 141 GAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTP 220 (433)
Q Consensus 141 G~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~ 220 (433)
|+ .|..|+++|. ...++++.++..... ..++++|||+|.+|+|+|..|++.+.+|+++.|+. +++.+
T Consensus 182 Gs--~p~~p~i~G~-~~~~~t~~~~~~l~~-~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~--~l~~~------- 248 (519)
T 3qfa_A 182 GE--RPRYLGIPGD-KEYCISSDDLFSLPY-CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI--LLRGF------- 248 (519)
T ss_dssp CE--EECCCCCTTH-HHHCBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTS-------
T ss_pred CC--CcCCCCCCCc-cCceEcHHHHhhhhh-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc--ccccC-------
Confidence 98 8999999981 112334434433333 35679999999999999999999999999999752 33321
Q ss_pred HHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCC---ceeeeC---
Q psy2398 221 QWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDD---IKNLNG--- 294 (433)
Q Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---v~~~~~--- 294 (433)
+..+.. .+.+. +. ..++ ++..... ++...+
T Consensus 249 ------d~~~~~-----~~~~~----l~----~~GV-------------------------~v~~~~~v~~v~~~~~~~~ 284 (519)
T 3qfa_A 249 ------DQDMAN-----KIGEH----ME----EHGI-------------------------KFIRQFVPIKVEQIEAGTP 284 (519)
T ss_dssp ------CHHHHH-----HHHHH----HH----HTTC-------------------------EEEESEEEEEEEEEECCTT
T ss_pred ------CHHHHH-----HHHHH----HH----HCCC-------------------------EEEeCCeEEEEEEccCCCC
Confidence 011111 11111 11 0111 2222222 333332
Q ss_pred Ce--EE--ecCCc---eeeccEEEEccCCCCCCCCC--Cccccccc--CCccccccccccCCCCcEEEEcccc-ccCChh
Q psy2398 295 NI--VH--FVDDT---HIEVDTIIYATGYNRHFPFI--DKEKLEWK--LGIPDLFIHIAPRNLDNIFFFGFVN-AAAGLG 362 (433)
Q Consensus 295 ~~--v~--~~dG~---~~~~D~vi~atG~~~~~~~l--~~~~~~~~--~~~~~~~~~~~~~~~p~i~~iG~~~-~~~~~~ 362 (433)
.. +. ..+|. ++++|.||+|||++|+.++| +...+..+ .+++.+++. +.++.|+||++|||. ..+...
T Consensus 285 ~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~-~~Ts~~~IyA~GD~~~g~~~~~ 363 (519)
T 3qfa_A 285 GRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDE-EQTNVPYIYAIGDILEDKVELT 363 (519)
T ss_dssp CEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTT-SBCSSTTEEECGGGBSSSCCCH
T ss_pred ceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCC-CccCCCCEEEEEeccCCCCccH
Confidence 22 22 24553 46899999999999999874 44445553 456776665 578999999999998 446778
Q ss_pred hHHHHHHHHHHHHHhhhh
Q psy2398 363 DGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 363 ~~a~~qa~~~a~~i~g~~ 380 (433)
+.|..||+.+|.+|.|..
T Consensus 364 ~~A~~~g~~aa~~i~g~~ 381 (519)
T 3qfa_A 364 PVAIQAGRLLAQRLYAGS 381 (519)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 899999999999998764
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=2.1e-31 Score=262.40 Aligned_cols=308 Identities=17% Similarity=0.183 Sum_probs=195.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC-------C--CCCCcccCCCCCCccccceEeecCCC----cccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME-------S--DLGGVWNSQASCGRVYPSLHLISPKF----NTQVPD 72 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~-------~--~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 72 (433)
..+||+|||||++|+++|..|++.|.+|+|||+. . .+||+|.+.. |.|+..+..+.. ......
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~g----ciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG----CIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHS----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccC----chhhHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999942 1 3899987642 333222111100 000001
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH-----------HcCCCcceEeCcEEEEEEEeCCeEEEEEccCc-EEEeCEEEEcc
Q psy2398 73 YPMPDNYPVYPNHSMMLDYLRSYAK-----------KFDVYNHSIFNTEVINLEQYEDIWEVELSNGK-KKKYDFIAVCN 140 (433)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~-~~~~d~vIvAt 140 (433)
+.+............+.++...+.+ ..++ .+ +...+..+ +.+.+.+.+.++. ++.||+||+||
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~-~~g~a~~~--~~~~v~v~~~~g~~~~~~d~lviAT 158 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKV--EY-INGLGSFV--DSHTLLAKLKSGERTITAQTFVIAV 158 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECSEEEEE--ETTEEEEECTTCCEEEEEEEEEECC
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEeEEEEc--cCCEEEEEeCCCeEEEEcCEEEEeC
Confidence 1111111112344455454444433 2233 12 23333322 3567778777764 69999999999
Q ss_pred CCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChh
Q psy2398 141 GAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTP 220 (433)
Q Consensus 141 G~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~ 220 (433)
|+ .|..|+++|. ....+++.++..... .+++++|||+|.+|+|+|..+++.+.+|+++.|.. +++..
T Consensus 159 Gs--~p~~p~i~G~-~~~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~l~~~------- 225 (483)
T 3dgh_A 159 GG--RPRYPDIPGA-VEYGITSDDLFSLDR-EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI--VLRGF------- 225 (483)
T ss_dssp CE--EECCCSSTTH-HHHCBCHHHHTTCSS-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC--SSTTS-------
T ss_pred CC--CcCCCCCCCc-ccccCcHHHHhhhhh-cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCccc-------
Confidence 97 8999999981 011233333333322 36799999999999999999999999999998743 22321
Q ss_pred HHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C---
Q psy2398 221 QWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N--- 295 (433)
Q Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~--- 295 (433)
+..+.. .+.+. +. ..++ ++.....+.++.. .
T Consensus 226 ------d~~~~~-----~l~~~----l~----~~Gv-------------------------~i~~~~~v~~i~~~~~~~~ 261 (483)
T 3dgh_A 226 ------DQQMAE-----LVAAS----ME----ERGI-------------------------PFLRKTVPLSVEKQDDGKL 261 (483)
T ss_dssp ------CHHHHH-----HHHHH----HH----HTTC-------------------------CEEETEEEEEEEECTTSCE
T ss_pred ------CHHHHH-----HHHHH----HH----hCCC-------------------------EEEeCCEEEEEEEcCCCcE
Confidence 011111 11111 11 1111 3333444555542 1
Q ss_pred eEEecCCc-----eeeccEEEEccCCCCCCCCC--CcccccccCCccccccccccCCCCcEEEEccccc-cCChhhHHHH
Q psy2398 296 IVHFVDDT-----HIEVDTIIYATGYNRHFPFI--DKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNA-AAGLGDGLRL 367 (433)
Q Consensus 296 ~v~~~dG~-----~~~~D~vi~atG~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~-~~~~~~~a~~ 367 (433)
.+.+.+|. ++++|.||+|||++|+.+++ +...+..+.+++.+++. +.++.|+||++|||+. .+...+.|..
T Consensus 262 ~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~A~~ 340 (483)
T 3dgh_A 262 LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQ-EATNVANIYAVGDIIYGKPELTPVAVL 340 (483)
T ss_dssp EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCCTT-CBCSSTTEEECSTTBTTSCCCHHHHHH
T ss_pred EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEECcC-CccCCCCEEEEEcccCCCCccHHHHHH
Confidence 36666654 68999999999999999887 33445554466777655 4789999999999974 4667889999
Q ss_pred HHHHHHHHHhhhh
Q psy2398 368 QGQFIRSYIQAFI 380 (433)
Q Consensus 368 qa~~~a~~i~g~~ 380 (433)
||+.+|.+|.|..
T Consensus 341 ~g~~aa~~i~g~~ 353 (483)
T 3dgh_A 341 AGRLLARRLYGGS 353 (483)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999864
No 68
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=1.2e-31 Score=262.07 Aligned_cols=293 Identities=14% Similarity=0.175 Sum_probs=194.8
Q ss_pred CcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
+||+|||||++|+++|..|++. |.+|+|||+.+.++..... .+. ........+ ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~~~---~~~g~~~~~-------------~~ 57 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-------IAL---YLGKEIKNN-------------DP 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-------HHH---HHTTCBGGG-------------CG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-------chh---hhcCCcccC-------------CH
Confidence 5899999999999999999998 9999999998765321100 000 000000000 00
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-c--CcEEEeCEEEEccCCCCCCCCCCCCCCCCCceecc
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-N--GKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHS 162 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~--g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~ 162 (433)
.++...+...++++++ .++++++|..++.+.+.+.+... + +.++.||+||+|||+ .|..|+++|.-...+++.
T Consensus 58 ~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs--~p~~p~i~g~~~~~v~~~ 133 (452)
T 2cdu_A 58 RGLFYSSPEELSNLGA--NVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS--KPTVPPIPGIDSSRVYLC 133 (452)
T ss_dssp GGGBSCCHHHHHHTTC--EEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE--EECCCCCTTTTSTTEEEC
T ss_pred HHhhhcCHHHHHHcCC--EEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC--CcCCCCCCCCCCCCEEEe
Confidence 0011112233455677 57789999999876676666542 1 356999999999997 889999998212234444
Q ss_pred CCCCCCCC-----CCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHH
Q psy2398 163 MDYKSPDQ-----IRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETM 237 (433)
Q Consensus 163 ~~~~~~~~-----~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~ 237 (433)
..+.+... ..+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.. +|+. +..
T Consensus 134 ~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-l~~~----------------~~~----- 191 (452)
T 2cdu_A 134 KNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV-LYKY----------------FDK----- 191 (452)
T ss_dssp SSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST-TTTT----------------SCH-----
T ss_pred CcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch-hhhh----------------hhh-----
Confidence 33322211 24789999999999999999999999999999988642 2211 111
Q ss_pred HHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--CeE--EecCCceeeccEEEEc
Q psy2398 238 AYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--NIV--HFVDDTHIEVDTIIYA 313 (433)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~~v--~~~dG~~~~~D~vi~a 313 (433)
.+.+.+.+.+. ..++ ++.....|+++.. ..+ ...||+++++|.||+|
T Consensus 192 ~~~~~l~~~l~----~~Gv-------------------------~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a 242 (452)
T 2cdu_A 192 EFTDILAKDYE----AHGV-------------------------NLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILC 242 (452)
T ss_dssp HHHHHHHHHHH----HTTC-------------------------EEEESSCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred hHHHHHHHHHH----HCCC-------------------------EEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEEC
Confidence 11111111111 1111 3444566777753 333 3348888999999999
Q ss_pred cCCCCCCCCCCcccccc-cCCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHHHHHHHHhhhh
Q psy2398 314 TGYNRHFPFIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 314 tG~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
||++|+.++++.. +.. .++++.+++. +.++.|+||++|||+.. ...++.|..||+.+|.++.|..
T Consensus 243 ~G~~p~~~ll~~~-l~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 243 IGFRPNTELLKGK-VAMLDNGAIITDEY-MHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp CCEEECCGGGTTT-SCBCTTSCBCCCTT-SBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred cCCCCCHHHHHHh-hhcCCCCCEEECCC-cCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 9999999988755 555 3455666665 57899999999999863 2467899999999999998863
No 69
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=1.6e-31 Score=263.03 Aligned_cols=302 Identities=18% Similarity=0.183 Sum_probs=192.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPDYPMPDNYPV 81 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 81 (433)
.++||+|||||++|+++|..|++.|++|+|||+. .+||+|.+.. |.+...+... ..+..+..+.++... .
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~g----c~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~ 92 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVG----CVPKKVMWNTAVHSEFMHDHADYGFPSCE-G 92 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHS----HHHHHHHHHHHHHHHHHTTTTTTTSCCCC-C
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccC----ccchHHHHHHHHHHHHHHHHHhcCccCCC-C
Confidence 3589999999999999999999999999999976 7899987642 2222111100 011111122221111 1
Q ss_pred CCCHHHHHHHHHHH-----------HHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC-
Q psy2398 82 YPNHSMMLDYLRSY-----------AKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP- 149 (433)
Q Consensus 82 ~~~~~~~~~~l~~~-----------~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p- 149 (433)
......+.++.+.+ .+..++ .+..+ ++..++ ...+.+. .++.++.||+||+|||+ .|..|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~~~--~~~~~v~-~~g~~~~~d~lviAtG~--~p~~p~ 164 (478)
T 3dk9_A 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIRG-HAAFTS--DPKPTIE-VSGKKYTAPHILIATGG--MPSTPH 164 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEECS--CSSCEEE-ETTEEEECSCEEECCCE--EECCCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEee--CCeEEEE-ECCEEEEeeEEEEccCC--CCCCCC
Confidence 22334444443333 333344 23323 222222 3345666 35567999999999997 88888
Q ss_pred --CCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhc
Q psy2398 150 --NYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLG 227 (433)
Q Consensus 150 --~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p 227 (433)
+++|.. ...++..+...... +++++|||+|.+|+|+|..+++.+.+|+++.|.+..+ |.. +
T Consensus 165 ~~~i~G~~--~~~~~~~~~~~~~~-~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~-------------d 227 (478)
T 3dk9_A 165 ESQIPGAS--LGITSDGFFQLEEL-PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-RSF-------------D 227 (478)
T ss_dssp TTTSTTGG--GSBCHHHHTTCCSC-CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTS-------------C
T ss_pred cCCCCCCc--eeEchHHhhchhhc-CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-ccc-------------C
Confidence 888821 23344444333333 6899999999999999999999999999999876532 321 1
Q ss_pred hhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee--cCCceeeeC--C----eEEe
Q psy2398 228 NKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP--KDDIKNLNG--N----IVHF 299 (433)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~--~----~v~~ 299 (433)
..+.. .+.+. + ....|.+ ...++++.. . .+.+
T Consensus 228 ~~~~~-----~~~~~----l-------------------------------~~~gv~i~~~~~v~~i~~~~~~~~~~v~~ 267 (478)
T 3dk9_A 228 SMIST-----NCTEE----L-------------------------------ENAGVEVLKFSQVKEVKKTLSGLEVSMVT 267 (478)
T ss_dssp HHHHH-----HHHHH----H-------------------------------HHTTCEEETTEEEEEEEECSSSEEEEEEE
T ss_pred HHHHH-----HHHHH----H-------------------------------HHCCCEEEeCCEEEEEEEcCCCcEEEEEE
Confidence 11111 11111 1 1112332 334555531 1 2455
Q ss_pred cC---C----ceeeccEEEEccCCCCCCCCC--Ccccccc-cCCccccccccccCCCCcEEEEccccccCChhhHHHHHH
Q psy2398 300 VD---D----THIEVDTIIYATGYNRHFPFI--DKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQG 369 (433)
Q Consensus 300 ~d---G----~~~~~D~vi~atG~~~~~~~l--~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa 369 (433)
.+ | .++++|.||+|||++|+.++| +...+.. +.+++.+++. +.++.|+||++|||...+...+.|..||
T Consensus 268 ~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g 346 (478)
T 3dk9_A 268 AVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEF-QNTNVKGIYAVGDVCGKALLTPVAIAAG 346 (478)
T ss_dssp CCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTT-CBCSSTTEEECGGGGCSSCCHHHHHHHH
T ss_pred ccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCC-cccCCCCEEEEEecCCCCccHhHHHHHH
Confidence 54 2 568999999999999999865 3334444 3455666654 4789999999999997777888999999
Q ss_pred HHHHHHHhhh
Q psy2398 370 QFIRSYIQAF 379 (433)
Q Consensus 370 ~~~a~~i~g~ 379 (433)
+.+|.+|.|.
T Consensus 347 ~~aa~~i~~~ 356 (478)
T 3dk9_A 347 RKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHcCC
Confidence 9999999886
No 70
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=1.3e-31 Score=264.16 Aligned_cols=308 Identities=18% Similarity=0.160 Sum_probs=193.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEcc--------CCCCCCcccCCCCCCccccceEeecCCC----cccCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEM--------ESDLGGVWNSQASCGRVYPSLHLISPKF----NTQVPDY 73 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~--------~~~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 73 (433)
..+||+|||||++|+++|..|++.|.+|+|||+ ...+||+|.+.. |.|+..+..... +.....+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~g----ciPsk~l~~~~~~~~~~~~~~~~ 80 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG----CIPKKLMHQAALLGGMIRDAHHY 80 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHS----HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccC----CcccHHHHHHHHHHHHHHHHHhc
Confidence 458999999999999999999999999999997 557999987652 333322211100 0011111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-----------HcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEcc
Q psy2398 74 PMPDNYPVYPNHSMMLDYLRSYAK-----------KFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCN 140 (433)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAt 140 (433)
.+............+.++.+.+.+ ..++. + +...+..+ +.+.+.+.+.+| .++.||+||+||
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~-i~g~~~~~--~~~~v~v~~~~g~~~~~~~d~lViAT 155 (488)
T 3dgz_A 81 GWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK--Y-FNIKASFV--DEHTVRGVDKGGKATLLSAEHIVIAT 155 (488)
T ss_dssp TCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--E-ECCEEEES--SSSEEEEECTTSCEEEEEEEEEEECC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--E-EEEEEEEc--cCCeEEEEeCCCceEEEECCEEEEcC
Confidence 111111123344444444433332 23331 2 23333322 245677776666 468999999999
Q ss_pred CCCCCCCCCC-CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCCh
Q psy2398 141 GAQRVARYPN-YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPT 219 (433)
Q Consensus 141 G~~s~p~~p~-i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~ 219 (433)
|+ .|..|+ ++|. ....+++.++..... .+++++|||+|.+|+|+|..|++.+.+|+++.|.. ++|.+
T Consensus 156 Gs--~p~~p~~i~G~-~~~~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~------ 223 (488)
T 3dgz_A 156 GG--RPRYPTQVKGA-LEYGITSDDIFWLKE-SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGF------ 223 (488)
T ss_dssp CE--EECCCSSCBTH-HHHCBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTS------
T ss_pred CC--CCCCCCCCCCc-ccccCcHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccC------
Confidence 98 899998 9981 011233333333333 36789999999999999999999999999999864 23321
Q ss_pred hHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee---CC-
Q psy2398 220 PQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN---GN- 295 (433)
Q Consensus 220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~---~~- 295 (433)
+..+.. .+.+.+. ..++ ++.....+.++. +.
T Consensus 224 -------d~~~~~-----~l~~~l~--------~~gv-------------------------~~~~~~~v~~i~~~~~~~ 258 (488)
T 3dgz_A 224 -------DQQMSS-----LVTEHME--------SHGT-------------------------QFLKGCVPSHIKKLPTNQ 258 (488)
T ss_dssp -------CHHHHH-----HHHHHHH--------HTTC-------------------------EEEETEEEEEEEECTTSC
T ss_pred -------CHHHHH-----HHHHHHH--------HCCC-------------------------EEEeCCEEEEEEEcCCCc
Confidence 111111 1111111 0111 222233344442 22
Q ss_pred -eEEecC---Cc--eeeccEEEEccCCCCCCCCCC--ccccccc--CCccccccccccCCCCcEEEEcccc-ccCChhhH
Q psy2398 296 -IVHFVD---DT--HIEVDTIIYATGYNRHFPFID--KEKLEWK--LGIPDLFIHIAPRNLDNIFFFGFVN-AAAGLGDG 364 (433)
Q Consensus 296 -~v~~~d---G~--~~~~D~vi~atG~~~~~~~l~--~~~~~~~--~~~~~~~~~~~~~~~p~i~~iG~~~-~~~~~~~~ 364 (433)
.+.+.+ |+ ++++|.||+|||++|+.++|. ...+..+ .+++.+++. +.++.|+||++|||+ ..+...+.
T Consensus 259 ~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~ 337 (488)
T 3dgz_A 259 LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQ-EATSVPHIYAIGDVAEGRPELTPT 337 (488)
T ss_dssp EEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTT-SBCSSTTEEECGGGBTTCCCCHHH
T ss_pred EEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCC-CccCCCCEEEeEEecCCCCcchhH
Confidence 355544 55 478999999999999998853 3445544 455666654 578999999999997 34567788
Q ss_pred HHHHHHHHHHHHhhhh
Q psy2398 365 LRLQGQFIRSYIQAFI 380 (433)
Q Consensus 365 a~~qa~~~a~~i~g~~ 380 (433)
|..||+.+|.++.|..
T Consensus 338 A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 338 AIKAGKLLAQRLFGKS 353 (488)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999999864
No 71
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.8e-30 Score=253.72 Aligned_cols=302 Identities=16% Similarity=0.220 Sum_probs=195.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecC----CCcccCCC---CCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISP----KFNTQVPD---YPMPDN 78 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~ 78 (433)
.++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|.+.. |.++..+... ..+..+.. +..+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g----~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~ 78 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIG----CIPSKALIHVAEQFHQASRFTEPSPLGISVA 78 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHS----HHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcC----cHhHHHHHHHHHHHHHHhhcccccccCcccC
Confidence 458999999999999999999999999999999 68999987542 2332211100 00001111 111111
Q ss_pred CCCCCCHHHHHHH-----------HHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 79 YPVYPNHSMMLDY-----------LRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 79 ~~~~~~~~~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
. .......+..+ +..+.++.++ .+..++.+. + +.. +|++.+ .++.||+||+|||+ .|.
T Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~~-~--~~~--~v~v~~-~~~~~d~lviATGs--~p~ 147 (458)
T 1lvl_A 79 S-PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAKV-L--DGK--QVEVDG-QRIQCEHLLLATGS--SSV 147 (458)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEEE-E--ETT--EEEETT-EEEECSEEEECCCE--EEC
T ss_pred C-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEEE-c--cCC--EEEEee-EEEEeCEEEEeCCC--CCC
Confidence 1 11223333322 3345556676 366565433 3 233 555555 67999999999998 777
Q ss_pred CCC-CCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhh
Q psy2398 148 YPN-YSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQL 226 (433)
Q Consensus 148 ~p~-i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 226 (433)
.|+ ++. .+.++++.++..... .+++++|||+|.+|+|+|..|++.+.+|+++.+.+.. +|..
T Consensus 148 ~~~~~~~--~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~------------- 210 (458)
T 1lvl_A 148 ELPMLPL--GGPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI-LPTY------------- 210 (458)
T ss_dssp CBTTBCC--BTTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS-STTS-------------
T ss_pred CCCCCCc--cCcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc-cccc-------------
Confidence 665 442 234666655554433 4789999999999999999999999999999988752 2311
Q ss_pred chhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEec--CC--
Q psy2398 227 GNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFV--DD-- 302 (433)
Q Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~--dG-- 302 (433)
+..+.. .+.+.+. ..++ ++.....+++++...+.+. +|
T Consensus 211 ~~~~~~-----~l~~~l~--------~~gv-------------------------~i~~~~~v~~i~~~~v~v~~~~G~~ 252 (458)
T 1lvl_A 211 DSELTA-----PVAESLK--------KLGI-------------------------ALHLGHSVEGYENGCLLANDGKGGQ 252 (458)
T ss_dssp CHHHHH-----HHHHHHH--------HHTC-------------------------EEETTCEEEEEETTEEEEECSSSCC
T ss_pred CHHHHH-----HHHHHHH--------HCCC-------------------------EEEECCEEEEEEeCCEEEEECCCce
Confidence 111111 1111111 0011 2223345566654324443 67
Q ss_pred ceeeccEEEEccCCCCCCCCC--CcccccccCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 303 THIEVDTIIYATGYNRHFPFI--DKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 303 ~~~~~D~vi~atG~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+++++|.||+|||++|+.+++ +..++..+.+++.+++. +.++.|+||++|||+..+...+.|..||+.+|.++.|.
T Consensus 253 ~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 253 LRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDER-CQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp CEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTT-CBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCC-CcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 579999999999999999875 43344443235666654 56889999999999987778889999999999999984
No 72
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=1.2e-30 Score=256.76 Aligned_cols=307 Identities=16% Similarity=0.116 Sum_probs=193.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC------CCCcccCCCCCCccccceEeecCCCc-----ccCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD------LGGVWNSQASCGRVYPSLHLISPKFN-----TQVPDYP 74 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~------~Gg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 74 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+. +||+|.+.. |.+...+...... ..+..+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~g----ciPsk~l~~~~~~~~~~~~~~~~~g 77 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVG----CIPSKALLDSSYKFHEAHESFKLHG 77 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHS----HHHHHHHHHHHHHHHHHHTTSGGGT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCcccccc----HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999874 455554321 1221110000000 0001111
Q ss_pred CCCCCCCCCCHHHHHHH-----------HHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccC
Q psy2398 75 MPDNYPVYPNHSMMLDY-----------LRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNG 141 (433)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG 141 (433)
+.... .......+.++ +....++.++ .+..++ +.. .+.+.+.+.+.++ ..+.||+||+|||
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~--~~~~~~~v~~~~g~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 78 ISTGE-VAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFEGH-GKL--LAGKKVEVTAADGSSQVLDTENVILASG 151 (476)
T ss_dssp EECSC-CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESE-EEE--CSTTCEEEECTTSCEEEECCSCEEECCC
T ss_pred cccCC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEE--ecCCEEEEEcCCCceEEEEcCEEEEcCC
Confidence 10000 11122222222 2233444455 244333 222 2356778877776 4689999999999
Q ss_pred CCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhH
Q psy2398 142 AQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQ 221 (433)
Q Consensus 142 ~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~ 221 (433)
+ .|..|+..+.....++++.+..... ..+++++|||+|.+|+|+|..+.+.+.+|+++.|.+.. +|..
T Consensus 152 ~--~p~~~~~~~~~~~~v~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~-------- 219 (476)
T 3lad_A 152 S--KPVEIPPAPVDQDVIVDSTGALDFQ-NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF-LPAV-------- 219 (476)
T ss_dssp E--EECCCTTSCCCSSSEEEHHHHTSCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS-STTS--------
T ss_pred C--CCCCCCCCCCCcccEEechhhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc-Cccc--------
Confidence 8 7776655542223455555444433 34789999999999999999999999999999988642 2211
Q ss_pred HhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeC----C
Q psy2398 222 WMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNG----N 295 (433)
Q Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~----~ 295 (433)
+. .+.+.+.+.+ ....|. ....+.++.. .
T Consensus 220 -----~~---------~~~~~l~~~l-------------------------------~~~Gv~v~~~~~v~~i~~~~~~~ 254 (476)
T 3lad_A 220 -----DE---------QVAKEAQKIL-------------------------------TKQGLKILLGARVTGTEVKNKQV 254 (476)
T ss_dssp -----CH---------HHHHHHHHHH-------------------------------HHTTEEEEETCEEEEEEECSSCE
T ss_pred -----CH---------HHHHHHHHHH-------------------------------HhCCCEEEECCEEEEEEEcCCEE
Confidence 11 1111111111 111333 3455666642 2
Q ss_pred eEEecCC---ceeeccEEEEccCCCCCCCCC--Cccccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHH
Q psy2398 296 IVHFVDD---THIEVDTIIYATGYNRHFPFI--DKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQG 369 (433)
Q Consensus 296 ~v~~~dG---~~~~~D~vi~atG~~~~~~~l--~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa 369 (433)
.+.+.++ +++++|.||+|||++|+.+++ +...+..+ .+++.+++. +.++.|+||++|||...+...+.|..||
T Consensus 255 ~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g 333 (476)
T 3lad_A 255 TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDY-CATSVPGVYAIGDVVRGAMLAHKASEEG 333 (476)
T ss_dssp EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTT-SBCSSTTEEECGGGSSSCCCHHHHHHHH
T ss_pred EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCC-cccCCCCEEEEEccCCCcccHHHHHHHH
Confidence 3566655 578999999999999998864 44445543 355666655 5689999999999997777888999999
Q ss_pred HHHHHHHhhhh
Q psy2398 370 QFIRSYIQAFI 380 (433)
Q Consensus 370 ~~~a~~i~g~~ 380 (433)
+.+|.+|.|+.
T Consensus 334 ~~aa~~i~g~~ 344 (476)
T 3lad_A 334 VVVAERIAGHK 344 (476)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHhcCCC
Confidence 99999999864
No 73
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=1.8e-31 Score=258.58 Aligned_cols=290 Identities=15% Similarity=0.111 Sum_probs=191.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+|||||++|+++|..|++.|. +|++||+.+.++. ..+ ..++.+.... ..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~----~~~----------~l~~~~~~~~-----------~~ 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH----HLP----------PLSKAYLAGK-----------AT 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB----CSG----------GGGTTTTTTC-----------SC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC----cCC----------CCcHHHhCCC-----------CC
Confidence 4799999999999999999999998 7999998765421 100 0000000000 00
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC-CCCC-c-eec
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG-YFSG-E-ILH 161 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g-~-~~~ 161 (433)
...+.....+++++.++ .++++++|+.++.++. .|++.++.++.||+||+|||+ .|..|+++| .+.+ . +.+
T Consensus 59 ~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~--~p~~~~i~G~~~~~~~~v~~ 132 (431)
T 1q1r_A 59 AESLYLRTPDAYAAQNI--QLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGG--RPRPLPVASGAVGKANNFRY 132 (431)
T ss_dssp SGGGBSSCHHHHHHTTE--EEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE--EECCCGGGTTHHHHSTTEEE
T ss_pred hHHhcccCHHHHHhCCC--EEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCC--CccCCCCCCcccCCCceEEE
Confidence 00000011233455666 5788899999986443 677778888999999999999 888898888 3222 1 222
Q ss_pred cCCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHH
Q psy2398 162 SMDYKSP-----DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEET 236 (433)
Q Consensus 162 ~~~~~~~-----~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~ 236 (433)
.....+. ....+++|+|||+|.+|+|+|..|.+.|.+|+++.+.+.. +++. ++..+..
T Consensus 133 ~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~-l~~~------------~~~~~~~---- 195 (431)
T 1q1r_A 133 LRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV-LERV------------TAPPVSA---- 195 (431)
T ss_dssp SSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST-TTTT------------SCHHHHH----
T ss_pred ECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc-ccch------------hhHHHHH----
Confidence 1111110 1124789999999999999999999999999999987642 2211 0111111
Q ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----C---eEEecCCceeeccE
Q psy2398 237 MAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----N---IVHFVDDTHIEVDT 309 (433)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~---~v~~~dG~~~~~D~ 309 (433)
.+.+.+. ..++ ++.....++++.+ . .|.+.||+++++|.
T Consensus 196 -~l~~~l~--------~~GV-------------------------~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~ 241 (431)
T 1q1r_A 196 -FYEHLHR--------EAGV-------------------------DIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADL 241 (431)
T ss_dssp -HHHHHHH--------HHTC-------------------------EEECSCCEEEEEECTTTCCEEEEEETTSCEEECSE
T ss_pred -HHHHHHH--------hCCe-------------------------EEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCE
Confidence 1111111 0111 2333455666643 2 47788999999999
Q ss_pred EEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC----------hhhHHHHHHHHHHHHHhhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG----------LGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~----------~~~~a~~qa~~~a~~i~g~ 379 (433)
||+|+|++|+.++++...+..++ ++.+++ .+.++.|+||++|||+..+. .+..|..||+.+|.+|.|.
T Consensus 242 Vv~a~G~~p~~~l~~~~gl~~~~-gi~Vd~-~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 319 (431)
T 1q1r_A 242 VIAGIGLIPNCELASAAGLQVDN-GIVINE-HMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGK 319 (431)
T ss_dssp EEECCCEEECCHHHHHTTCCBSS-SEECCT-TSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCCcCcchhhccCCCCCC-CEEECC-CcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCC
Confidence 99999999998888766665553 455554 45789999999999986432 4578999999999999986
Q ss_pred h
Q psy2398 380 I 380 (433)
Q Consensus 380 ~ 380 (433)
.
T Consensus 320 ~ 320 (431)
T 1q1r_A 320 V 320 (431)
T ss_dssp C
T ss_pred C
Confidence 4
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=8.6e-31 Score=257.55 Aligned_cols=291 Identities=15% Similarity=0.245 Sum_probs=192.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++||+|||||++|+++|..|++. |.+|+|||+.+..++.... .+.. .... ...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~~~~---~~~~---------------~~~ 90 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-------LPYV---ISGA---------------IAS 90 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-------HHHH---HTTS---------------SSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-------cchh---hcCC---------------cCC
Confidence 47999999999999999999996 8999999998765421110 0000 0000 000
Q ss_pred HHHHH-HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEccCCCCCCCCCCCCC-CCCCce
Q psy2398 85 HSMML-DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-SNGK--KKKYDFIAVCNGAQRVARYPNYSG-YFSGEI 159 (433)
Q Consensus 85 ~~~~~-~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~--~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~ 159 (433)
..++. .+...+.+++++ .++++++|+.++.+.+.+.+.. .+|+ ++.||+||+|||+ .|..|+++| ... .+
T Consensus 91 ~~~l~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~--~p~~p~i~G~~~~-~v 165 (480)
T 3cgb_A 91 TEKLIARNVKTFRDKYGI--DAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV--RPVMPEWEGRDLQ-GV 165 (480)
T ss_dssp GGGGBSSCHHHHHHTTCC--EEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE--EECCCCCBTTTSB-TE
T ss_pred HHHhhhcCHHHHHhhcCC--EEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC--cccCCCCCCccCC-CE
Confidence 11111 112333455577 5788899999987777777765 3455 6899999999998 889999998 322 34
Q ss_pred eccCCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcC
Q psy2398 160 LHSMDYKSPD-------QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSS 232 (433)
Q Consensus 160 ~~~~~~~~~~-------~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~ 232 (433)
++.....+.. ...+++|+|||+|.+|+|+|..+.+.+.+|+++.+++.. ++.. +.
T Consensus 166 ~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~-------------~~---- 227 (480)
T 3cgb_A 166 HLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHI-GTIY-------------DG---- 227 (480)
T ss_dssp ECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGT-TSSS-------------CH----
T ss_pred EEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCch-hhcC-------------CH----
Confidence 4433222111 126899999999999999999999999999999987642 2210 11
Q ss_pred chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCC-eE--EecCCceeeccE
Q psy2398 233 KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGN-IV--HFVDDTHIEVDT 309 (433)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~-~v--~~~dG~~~~~D~ 309 (433)
.+.+.+.+.+. ..++ ++.....|+++.+. .+ ...++.++++|.
T Consensus 228 -----~~~~~l~~~l~----~~Gv-------------------------~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~ 273 (480)
T 3cgb_A 228 -----DMAEYIYKEAD----KHHI-------------------------EILTNENVKAFKGNERVEAVETDKGTYKADL 273 (480)
T ss_dssp -----HHHHHHHHHHH----HTTC-------------------------EEECSCCEEEEEESSBEEEEEETTEEEECSE
T ss_pred -----HHHHHHHHHHH----HcCc-------------------------EEEcCCEEEEEEcCCcEEEEEECCCEEEcCE
Confidence 11111111111 1111 23334456666432 22 233556799999
Q ss_pred EEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEccccccC----------ChhhHHHHHHHHHHHHHhh
Q psy2398 310 IIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAA----------GLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 310 vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~----------~~~~~a~~qa~~~a~~i~g 378 (433)
||+|+|++|+.++++...+..+ ++++.+++. +.++.|+||++|||+... .++..|..||+.+|.++.|
T Consensus 274 vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~-~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 274 VLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAY-MQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp EEECSCEEESCGGGTTSCCCBCTTSCBCCCTT-SBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEECcCCCcChHHHHhCCcccCCCCCEEECCC-ccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 9999999999988876656553 456666654 578899999999998431 3578899999999999988
Q ss_pred hh
Q psy2398 379 FI 380 (433)
Q Consensus 379 ~~ 380 (433)
..
T Consensus 353 ~~ 354 (480)
T 3cgb_A 353 KR 354 (480)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 75
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=4.9e-30 Score=250.23 Aligned_cols=287 Identities=16% Similarity=0.174 Sum_probs=191.6
Q ss_pred CcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
+||+|||||++|+++|..|++. |.+|+|||+.+.+|.. ... .+. ...... ...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~~------~~~---~~~~~~---------------~~~ 55 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-SAG------MQL---YLEGKV---------------KDV 55 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-GGG------HHH---HHTTSS---------------CCG
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-ccc------chh---hhcCcc---------------CCH
Confidence 4899999999999999999998 8999999998765411 000 000 000000 000
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEccCCCCCCCCCCCCC-CCCCceec
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL-SNGK--KKKYDFIAVCNGAQRVARYPNYSG-YFSGEILH 161 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~--~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~~ 161 (433)
.++..+.....+++++ .+++++.|..++.+.+.+.+.. .+|+ ++.||+||+|||+ .|..|+++| ... .+++
T Consensus 56 ~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~--~p~~p~i~G~~~~-~v~~ 130 (447)
T 1nhp_A 56 NSVRYMTGEKMESRGV--NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA--VPFELDIPGKDLD-NIYL 130 (447)
T ss_dssp GGSBSCCHHHHHHTTC--EEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE--EECCCCSTTTTSB-SEEC
T ss_pred HHhhcCCHHHHHHCCC--EEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC--CcCCCCCCCCCCC-CeEE
Confidence 1111112233445677 5778999999987667666654 2354 3899999999998 889999998 322 3444
Q ss_pred cCCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCch
Q psy2398 162 SMDYKSP-------DQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKE 234 (433)
Q Consensus 162 ~~~~~~~-------~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~ 234 (433)
...+.+. ....+++++|||+|.+|+|+|..+++.+.+|+++.+.+.. +++. +..
T Consensus 131 ~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-l~~~----------------~~~-- 191 (447)
T 1nhp_A 131 MRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP-LGVY----------------LDK-- 191 (447)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST-TTTT----------------CCH--
T ss_pred ECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc-cccc----------------CCH--
Confidence 4332211 1125789999999999999999999999999999987642 2211 100
Q ss_pred HHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeCC----eEEecCCceeecc
Q psy2398 235 ETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNGN----IVHFVDDTHIEVD 308 (433)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~~----~v~~~dG~~~~~D 308 (433)
.+.+.+.+.+ ....++ ....++++... .+.+ +|.++++|
T Consensus 192 ---~~~~~l~~~l-------------------------------~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d 236 (447)
T 1nhp_A 192 ---EFTDVLTEEM-------------------------------EANNITIATGETVERYEGDGRVQKVVT-DKNAYDAD 236 (447)
T ss_dssp ---HHHHHHHHHH-------------------------------HTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECS
T ss_pred ---HHHHHHHHHH-------------------------------HhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECC
Confidence 1111111111 111333 34566666532 2444 67789999
Q ss_pred EEEEccCCCCCCCCCCccccccc-CCccccccccccCCCCcEEEEcccccc----------CChhhHHHHHHHHHHHHHh
Q psy2398 309 TIIYATGYNRHFPFIDKEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA----------AGLGDGLRLQGQFIRSYIQ 377 (433)
Q Consensus 309 ~vi~atG~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~----------~~~~~~a~~qa~~~a~~i~ 377 (433)
.||+|||++|+.++++.. +..+ ++++.++.. +.++.|+||++|||+.. ...++.|..||+.+|.++.
T Consensus 237 ~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~-~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 237 LVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEY-MRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp EEEECSCEEESCGGGTTT-SCBCTTSCBCCCTT-CBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred EEEECcCCCCChHHHHhh-hhhcCCCcEEECcc-ccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 999999999999988755 5543 455666654 57889999999999852 2467889999999999998
Q ss_pred hhh
Q psy2398 378 AFI 380 (433)
Q Consensus 378 g~~ 380 (433)
|..
T Consensus 315 g~~ 317 (447)
T 1nhp_A 315 EPV 317 (447)
T ss_dssp SCC
T ss_pred CCC
Confidence 853
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=1e-30 Score=253.71 Aligned_cols=291 Identities=19% Similarity=0.213 Sum_probs=184.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..++|+|||||++|+++|..|++.|++|+|||+.+.+||.|.+..+ .+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip-----------------------------~~~~~ 171 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIP-----------------------------GFKLE 171 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSC-----------------------------TTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCC-----------------------------CccCC
Confidence 4579999999999999999999999999999999999998876411 11122
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC-CCCCceeccCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG-YFSGEILHSMD 164 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~~~~~ 164 (433)
.++.++..++++++++ ++++++.|. . .+++++. ...||+||+|||+. .|+.++++| ...+ +.+..+
T Consensus 172 ~~~~~~~~~~l~~~gv--~~~~~~~v~------~--~v~~~~~-~~~~d~vvlAtG~~-~~~~~~ipG~~~~g-v~~a~~ 238 (456)
T 2vdc_G 172 KSVVERRVKLLADAGV--IYHPNFEVG------R--DASLPEL-RRKHVAVLVATGVY-KARDIKAPGSGLGN-IVAALD 238 (456)
T ss_dssp HHHHHHHHHHHHHTTC--EEETTCCBT------T--TBCHHHH-HSSCSEEEECCCCC-EECCTTCSCCTTTT-EEEHHH
T ss_pred HHHHHHHHHHHHHCCc--EEEeCCEec------c--EEEhhHh-HhhCCEEEEecCCC-CCCCCCCCCCcCCC-cEEHHH
Confidence 4566677777888887 577776642 1 1222232 25799999999984 467778888 3333 222111
Q ss_pred C---------CC--------CCCCCCCeEEEEcCCCCHHHHHHHHhccCC-cEEEEEecCceeecccCCCCChhHHhHhh
Q psy2398 165 Y---------KS--------PDQIRNKRVLVVGAGNSGCDIAVDASHHSE-KVYHSTRRGYHYYPKFIDGKPTPQWMLQL 226 (433)
Q Consensus 165 ~---------~~--------~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 226 (433)
+ .. .....+|+|+|||+|.+|+|+|..+.+.+. +|+++.|++...+|..
T Consensus 239 ~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~------------- 305 (456)
T 2vdc_G 239 YLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGS------------- 305 (456)
T ss_dssp HHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSC-------------
T ss_pred HHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCC-------------
Confidence 0 00 123568999999999999999999999876 5999999875333321
Q ss_pred chhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee---ecC-Cceee--eC-CeEEe
Q psy2398 227 GNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL---PKD-DIKNL--NG-NIVHF 299 (433)
Q Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~-~v~~~--~~-~~v~~ 299 (433)
. ...+...+ .++. ...+..+.+....+++. +.. ..... ++ .....
T Consensus 306 ---~-------~e~~~~~~--------~Gv~----------~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~ 357 (456)
T 2vdc_G 306 ---Q-------REVAHAEE--------EGVE----------FIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQV 357 (456)
T ss_dssp ---H-------HHHHHHHH--------TTCE----------EECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEE
T ss_pred ---H-------HHHHHHHH--------CCCE----------EEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccc
Confidence 0 00111110 0110 00000000000011110 000 00000 00 00111
Q ss_pred cCC--ceeeccEEEEccCCCCCCC--CCCcccccc-cCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHH
Q psy2398 300 VDD--THIEVDTIIYATGYNRHFP--FIDKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRS 374 (433)
Q Consensus 300 ~dG--~~~~~D~vi~atG~~~~~~--~l~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~ 374 (433)
.+| .++++|.||+|+|++|+.. +++...+.. ..+.+.++...+.|+.|+||++||+...+.++..|..||+.+|.
T Consensus 358 ~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~ 437 (456)
T 2vdc_G 358 IEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAE 437 (456)
T ss_dssp EEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHH
Confidence 133 3589999999999999864 666555544 34667777665679999999999998877778889999999988
Q ss_pred HHhhh
Q psy2398 375 YIQAF 379 (433)
Q Consensus 375 ~i~g~ 379 (433)
+|.+.
T Consensus 438 ~i~~~ 442 (456)
T 2vdc_G 438 GIHAY 442 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87643
No 77
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.97 E-value=5.3e-31 Score=259.70 Aligned_cols=309 Identities=17% Similarity=0.134 Sum_probs=195.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccC--------CCCCCcccCCCCCCccccceEeecCCCccc-----CCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEME--------SDLGGVWNSQASCGRVYPSLHLISPKFNTQ-----VPDYP 74 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~--------~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 74 (433)
|||+||||||+|+.+|..++++|.+|+|||+. ..+||+|.+.. |.|+..+.....+.. ...+.
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~G----CIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVG----CVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHS----HHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccc----hHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 79999999999999999999999999999974 34899887763 344322211110000 00000
Q ss_pred CCCCCCCCCCHHHHHHHHHHH-----------HHHcCCCcceEeCcEEEEEEEeCCeEEEEEc----cCcEEEeCEEEEc
Q psy2398 75 MPDNYPVYPNHSMMLDYLRSY-----------AKKFDVYNHSIFNTEVINLEQYEDIWEVELS----NGKKKKYDFIAVC 139 (433)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~----~g~~~~~d~vIvA 139 (433)
..... .......+.++.+.. .++.++. + +.....-+ +.+...|... +++++++|++|||
T Consensus 119 i~~~~-~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~--~-i~G~a~f~--~~~~v~V~~~~~~~~~~~i~a~~iiIA 192 (542)
T 4b1b_A 119 WKFDN-LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK--Y-INGLAKLK--DKNTVSYYLKGDLSKEETVTGKYILIA 192 (542)
T ss_dssp EEEEE-EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--E-ECEEEEEE--ETTEEEEEEC--CCCEEEEEEEEEEEC
T ss_pred cccCc-ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--E-EeeeEEEc--CCCcceEeecccCCceEEEeeeeEEec
Confidence 00000 001223333333332 2233431 1 12221111 2455555443 2346899999999
Q ss_pred cCCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCCh
Q psy2398 140 NGAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPT 219 (433)
Q Consensus 140 tG~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~ 219 (433)
||+ .|.+|+..+.....++.+.+..+.... +++++|||+|.+|+|+|..+++.|.+||++.|.. ++|..+
T Consensus 193 TGs--~P~~P~~~~~~~~~~~ts~~~l~l~~l-P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~--~L~~~D----- 262 (542)
T 4b1b_A 193 TGC--RPHIPDDVEGAKELSITSDDIFSLKKD-PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI--VLRGFD----- 262 (542)
T ss_dssp CCE--EECCCSSSBTHHHHCBCHHHHTTCSSC-CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC--SSTTSC-----
T ss_pred cCC--CCCCCCcccCCCccccCchhhhccccC-CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc--cccccc-----
Confidence 998 899886554111234455555555554 5789999999999999999999999999998753 344321
Q ss_pred hHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee--CC--
Q psy2398 220 PQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN--GN-- 295 (433)
Q Consensus 220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~--~~-- 295 (433)
. ...+.+.+.+. ..++ .+.....++++. +.
T Consensus 263 --------~---------ei~~~l~~~l~----~~gi-------------------------~~~~~~~v~~~~~~~~~~ 296 (542)
T 4b1b_A 263 --------Q---------QCAVKVKLYME----EQGV-------------------------MFKNGILPKKLTKMDDKI 296 (542)
T ss_dssp --------H---------HHHHHHHHHHH----HTTC-------------------------EEEETCCEEEEEEETTEE
T ss_pred --------h---------hHHHHHHHHHH----hhcc-------------------------eeecceEEEEEEecCCeE
Confidence 1 11111111111 1111 233344455553 22
Q ss_pred eEEecCCceeeccEEEEccCCCCCCCCCCcccc--ccc-CCccccccccccCCCCcEEEEcccccc-CChhhHHHHHHHH
Q psy2398 296 IVHFVDDTHIEVDTIIYATGYNRHFPFIDKEKL--EWK-LGIPDLFIHIAPRNLDNIFFFGFVNAA-AGLGDGLRLQGQF 371 (433)
Q Consensus 296 ~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~-~~~~~~a~~qa~~ 371 (433)
.+.+.++.++++|.|++|+|++||+..|..+.. ..+ .+.....+..+.|+.|+|||+||+... +.+.+.|..|++.
T Consensus 297 ~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~ 376 (542)
T 4b1b_A 297 LVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEI 376 (542)
T ss_dssp EEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHH
T ss_pred EEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHH
Confidence 356788889999999999999999998876644 332 345556677889999999999999864 5678899999999
Q ss_pred HHHHHhhhhcC
Q psy2398 372 IRSYIQAFIRK 382 (433)
Q Consensus 372 ~a~~i~g~~~l 382 (433)
++.++.|....
T Consensus 377 aa~~i~g~~~~ 387 (542)
T 4b1b_A 377 LARRLFKDSDE 387 (542)
T ss_dssp HHHHHHSCCCC
T ss_pred HHHHHhcCCCc
Confidence 99999986543
No 78
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=1e-28 Score=249.46 Aligned_cols=307 Identities=17% Similarity=0.200 Sum_probs=185.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC-C-------CCCCcccCCCCCCccccceEeecCCC----cccCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME-S-------DLGGVWNSQASCGRVYPSLHLISPKF----NTQVPDY 73 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~-~-------~~Gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 73 (433)
.++||+||||||+|+++|..|++.|++|+|||+. + .+||+|.+.. ++|+..+..... ......+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g----~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVG----CIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccC----CCchHHHHHHHHHHHHHhhHHhC
Confidence 4589999999999999999999999999999973 2 3677665431 233221111000 0000000
Q ss_pred C--CCCCCCCCCCHHHHHHHHHHHHHHc-----------CCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEE
Q psy2398 74 P--MPDNYPVYPNHSMMLDYLRSYAKKF-----------DVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAV 138 (433)
Q Consensus 74 ~--~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIv 138 (433)
. .+.. .......++.++++.+++++ ++ .+ ....+..++ .....+...+| .++.||+||+
T Consensus 182 g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~-~~~~~~~~~--~~~v~v~~~~g~~~~~~~d~lvi 255 (598)
T 2x8g_A 182 GWSLDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV--TY-LNAKGRLIS--PHEVQITDKNQKVSTITGNKIIL 255 (598)
T ss_dssp TCCCCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECSEEEEEE--TTEEEEECTTCCEEEEEEEEEEE
T ss_pred CccccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCc--EE-EEEEEEEcC--CCEEEEEeCCCCeEEEEeCEEEE
Confidence 0 0100 01234466666666555432 22 11 122333332 34455555555 4689999999
Q ss_pred ccCCCCCCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCC
Q psy2398 139 CNGAQRVARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKP 218 (433)
Q Consensus 139 AtG~~s~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~ 218 (433)
|||+ .|+.|+++|.. ...+++.++... ...+++|+|||+|.+|+|+|..|++.|.+|+++.|+ .++|..
T Consensus 256 AtGs--~p~~p~i~G~~-~~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~----- 324 (598)
T 2x8g_A 256 ATGE--RPKYPEIPGAV-EYGITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGF----- 324 (598)
T ss_dssp CCCE--EECCCSSTTHH-HHCEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTS-----
T ss_pred eCCC--CCCCCCCCCcc-cceEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcC-----
Confidence 9997 89999999810 012333332222 234678999999999999999999999999999987 233321
Q ss_pred hhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceee------
Q psy2398 219 TPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNL------ 292 (433)
Q Consensus 219 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~------ 292 (433)
+..+.. .+.+.+. ..++ .+.....+.++
T Consensus 325 --------d~~~~~-----~~~~~l~--------~~gv-------------------------~i~~~~~v~~v~~~~~~ 358 (598)
T 2x8g_A 325 --------DQQMAE-----KVGDYME--------NHGV-------------------------KFAKLCVPDEIKQLKVV 358 (598)
T ss_dssp --------CHHHHH-----HHHHHHH--------HTTC-------------------------EEEETEEEEEEEEEECC
T ss_pred --------CHHHHH-----HHHHHHH--------hCCC-------------------------EEEECCeEEEEEecccc
Confidence 011111 1111111 0111 11111112222
Q ss_pred --eC---CeE----EecCCceee--ccEEEEccCCCCCCCCCC--ccccccc-CCccccccccccCCCCcEEEEccccc-
Q psy2398 293 --NG---NIV----HFVDDTHIE--VDTIIYATGYNRHFPFID--KEKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNA- 357 (433)
Q Consensus 293 --~~---~~v----~~~dG~~~~--~D~vi~atG~~~~~~~l~--~~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~- 357 (433)
.. ..+ .+.+|++++ +|.||+|+|++|+.++|. ...+..+ .+++.+++. +.++.|+||++||++.
T Consensus 359 ~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~-~~ts~~~VyA~GD~~~~ 437 (598)
T 2x8g_A 359 DTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDD-EQTTVSNVYAIGDINAG 437 (598)
T ss_dssp BTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTT-SBCSSTTEEECGGGBTT
T ss_pred ccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCC-CcCCCCCEEEEeeecCC
Confidence 11 222 245787655 999999999999988753 3344443 355666665 5789999999999954
Q ss_pred cCChhhHHHHHHHHHHHHHhhhh
Q psy2398 358 AAGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 358 ~~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
.+..++.|..||+.+|.+|.+..
T Consensus 438 ~~~~~~~A~~~g~~aa~~i~~~~ 460 (598)
T 2x8g_A 438 KPQLTPVAIQAGRYLARRLFAGA 460 (598)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCccHHHHHHhHHHHHHHHhcCC
Confidence 35677889999999999998754
No 79
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.96 E-value=7.7e-30 Score=246.19 Aligned_cols=281 Identities=13% Similarity=0.086 Sum_probs=186.6
Q ss_pred CcEEEECCChHHHHHHHHHHh---cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSE---GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~---~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++|+|||||++|+++|..|++ .|.+|+|||+++..+..... + . .......
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~--------~--------------~-----~~~~~~~ 54 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL--------P--------------H-----VAIGVRD 54 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS--------C--------------C-----CCSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch--------h--------------h-----cccCCcC
Confidence 589999999999999999999 89999999998754211000 0 0 0001111
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc----EEEeCEEEEccCCCCCCCCCCCCC-CCCCce
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK----KKKYDFIAVCNGAQRVARYPNYSG-YFSGEI 159 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~----~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~ 159 (433)
..++..++.+.+++.++ ++..+ +|+.++.+.. .|++.++. ++.||+||+|||. .|..|.++| .. ..
T Consensus 55 ~~~~~~~~~~~~~~~gv--~~~~~-~v~~i~~~~~--~V~~~~g~~~~~~~~~d~lViAtG~--~~~~~~ipG~~~--~~ 125 (409)
T 3h8l_A 55 VDELKVDLSEALPEKGI--QFQEG-TVEKIDAKSS--MVYYTKPDGSMAEEEYDYVIVGIGA--HLATELVKGWDK--YG 125 (409)
T ss_dssp CCCEEEEHHHHTGGGTC--EEEEC-EEEEEETTTT--EEEEECTTSCEEEEECSEEEECCCC--EECGGGSBTHHH--HC
T ss_pred HHHHHHHHHHHHhhCCe--EEEEe-eEEEEeCCCC--EEEEccCCcccceeeCCEEEECCCC--CcCccCCCChhh--cC
Confidence 12223445555666677 35555 8888876555 45555543 3899999999998 888888888 21 22
Q ss_pred eccCCCCCCCCCC------CCeEEEEcCC-------------------C------CHHHHHHHHh----ccC----CcEE
Q psy2398 160 LHSMDYKSPDQIR------NKRVLVVGAG-------------------N------SGCDIAVDAS----HHS----EKVY 200 (433)
Q Consensus 160 ~~~~~~~~~~~~~------~~~v~VvG~G-------------------~------sg~d~a~~l~----~~~----~~V~ 200 (433)
.+...+.....+. .++++|||+| . .++|+|..++ +.+ .+|+
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~ 205 (409)
T 3h8l_A 126 YSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVT 205 (409)
T ss_dssp EESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEE
T ss_pred cCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEE
Confidence 2322222211111 2567799999 2 3678886554 445 3899
Q ss_pred EEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccC
Q psy2398 201 HSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGH 280 (433)
Q Consensus 201 ~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (433)
++.+.+ .+|.. +..+.. .+.+.+. .
T Consensus 206 ~~~~~~--~l~~~-------------~~~~~~-----~~~~~l~-----------------------------------~ 230 (409)
T 3h8l_A 206 VFSPGE--YLSDL-------------SPNSRK-----AVASIYN-----------------------------------Q 230 (409)
T ss_dssp EECSSS--SSTTB-------------CHHHHH-----HHHHHHH-----------------------------------H
T ss_pred EEeCCc--ccccc-------------CHHHHH-----HHHHHHH-----------------------------------H
Confidence 998876 33321 011111 1111111 1
Q ss_pred CCee--ecCCceeeeCCeEEecCCceeeccEEEEccCCCCCCCCCCcc--cccccCCccccccccccCCCCcEEEEcccc
Q psy2398 281 GDIL--PKDDIKNLNGNIVHFVDDTHIEVDTIIYATGYNRHFPFIDKE--KLEWKLGIPDLFIHIAPRNLDNIFFFGFVN 356 (433)
Q Consensus 281 ~~v~--~~~~v~~~~~~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~ 356 (433)
.+|+ ....|++++++.|.++||+++++|.||+|+|++|+ +++... .+....+++.++..+..+++||||++||++
T Consensus 231 ~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~ 309 (409)
T 3h8l_A 231 LGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDAN 309 (409)
T ss_dssp HTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGB
T ss_pred CCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhc
Confidence 1344 35678899988999999999999999999999998 566544 333345678888877666999999999998
Q ss_pred cc--CChhhHHHHHHHHHHHHHhhhh
Q psy2398 357 AA--AGLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 357 ~~--~~~~~~a~~qa~~~a~~i~g~~ 380 (433)
.. +.....|+.||+.+|++|.+..
T Consensus 310 ~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 310 SMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 63 5677889999999999998876
No 80
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.96 E-value=5.8e-30 Score=251.67 Aligned_cols=290 Identities=16% Similarity=0.216 Sum_probs=180.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++++|||||||++|+++|+.|.+.+++|+|||+++.. . |..+...... +....
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~----------~~PlL~~va~---------------G~l~~ 93 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--L----------FTPLLPSAPV---------------GTVDE 93 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--E----------CGGGGGGTTT---------------TSSCG
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--c----------cccchhHHhh---------------ccccH
Confidence 4578999999999999999999999999999997632 1 1111000000 00111
Q ss_pred HHHHHHHHHHHHHcCCCcceE-eCcEEEEEEEeCCeEEEEE------------------ccCcEEEeCEEEEccCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSI-FNTEVINLEQYEDIWEVEL------------------SNGKKKKYDFIAVCNGAQRVA 146 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~-~~~~V~~v~~~~~~~~v~~------------------~~g~~~~~d~vIvAtG~~s~p 146 (433)
.++...++.+.....- .+. ...+|+.|+.+.+..++.. .++.++.||++|+|||+ .|
T Consensus 94 ~~i~~p~~~~~~~~~~--~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs--~~ 169 (502)
T 4g6h_A 94 KSIIEPIVNFALKKKG--NVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA--EP 169 (502)
T ss_dssp GGGEEEHHHHHTTCSS--CEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC--EE
T ss_pred HHhhhhHHHHHHhhcC--CeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc--cc
Confidence 1111112222221111 233 3567888887666655543 23457999999999998 88
Q ss_pred CCCCCCC--CCC---CceeccCCCC--------------C--CCCCCCCeEEEEcCCCCHHHHHHHHhccC---------
Q psy2398 147 RYPNYSG--YFS---GEILHSMDYK--------------S--PDQIRNKRVLVVGAGNSGCDIAVDASHHS--------- 196 (433)
Q Consensus 147 ~~p~i~g--~~~---g~~~~~~~~~--------------~--~~~~~~~~v~VvG~G~sg~d~a~~l~~~~--------- 196 (433)
+.|++|| +.. ..+-++..++ . ++.....+++|||+|++|+|+|.+|+..+
T Consensus 170 ~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~ 249 (502)
T 4g6h_A 170 NTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLP 249 (502)
T ss_dssp CCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCH
T ss_pred ccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcc
Confidence 9999998 110 0000000000 0 00011247999999999999999988642
Q ss_pred -----CcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccC
Q psy2398 197 -----EKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMN 271 (433)
Q Consensus 197 -----~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (433)
.+|+++.+.+. ++|.+ +..+.. .+.+.+. ..|+
T Consensus 250 ~~~~~~~V~lve~~~~-il~~~-------------~~~~~~-----~~~~~L~--------~~GV--------------- 287 (502)
T 4g6h_A 250 ALAEEVQIHLVEALPI-VLNMF-------------EKKLSS-----YAQSHLE--------NTSI--------------- 287 (502)
T ss_dssp HHHHHCEEEEECSSSS-SSTTS-------------CHHHHH-----HHHHHHH--------HTTC---------------
T ss_pred cccccceeEEeccccc-cccCC-------------CHHHHH-----HHHHHHH--------hcce---------------
Confidence 57999988765 33321 122222 2222111 1122
Q ss_pred hhhhhcccCCCeeecCCceeeeCCeEEe----cCCc----eeeccEEEEccCCCCCCCCCCc----ccccc-cCCccccc
Q psy2398 272 SQILYHIGHGDILPKDDIKNLNGNIVHF----VDDT----HIEVDTIIYATGYNRHFPFIDK----EKLEW-KLGIPDLF 338 (433)
Q Consensus 272 ~~~~~~~~~~~v~~~~~v~~~~~~~v~~----~dG~----~~~~D~vi~atG~~~~~~~l~~----~~~~~-~~~~~~~~ 338 (433)
++.....|++++++.+.+ .||+ ++++|.||||+|.+|+ |++.. ..... ..+++.++
T Consensus 288 ----------~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~-~~~~~l~~~~~~~~~~~g~I~Vd 356 (502)
T 4g6h_A 288 ----------KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR-PVITDLFKKIPEQNSSKRGLAVN 356 (502)
T ss_dssp ----------EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC-HHHHHHHHHSGGGTTCCSSEEBC
T ss_pred ----------eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC-HHHHhHHHhccccccCCCceeEC
Confidence 344456678888777654 4664 5899999999999998 43321 11122 34677888
Q ss_pred cccccCCCCcEEEEcccccc--CChhhHHHHHHHHHHHHHhhh
Q psy2398 339 IHIAPRNLDNIFFFGFVNAA--AGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 339 ~~~~~~~~p~i~~iG~~~~~--~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+.+..+++||||++|||+.. +...+.|..||+++|++|.+.
T Consensus 357 ~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 357 DFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 87777799999999999854 467789999999999998654
No 81
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.96 E-value=1.7e-28 Score=238.52 Aligned_cols=290 Identities=15% Similarity=0.175 Sum_probs=190.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHh---cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE---GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~---~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
.+++|+|||||++|+++|..|++ .|++|+|||+.+... |.... +......
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~------------~~~~~---------------~~~~~g~ 55 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ------------FVPSN---------------PWVGVGW 55 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE------------CGGGH---------------HHHHHTS
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc------------ccCCc---------------cccccCc
Confidence 46899999999999999999999 799999999987431 10000 0000022
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCcee
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEIL 160 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~ 160 (433)
....++...+..++++.++. +. ..+|+.++.+.+ .|+++++.++.||+||+|||+ .|+.|.++| .+.+...
T Consensus 56 ~~~~~~~~~l~~~~~~~gv~--~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~--~~~~~~ipG~~~~~~~~~ 128 (437)
T 3sx6_A 56 KERDDIAFPIRHYVERKGIH--FI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGP--KLAFENVPGSDPHEGPVQ 128 (437)
T ss_dssp SCHHHHEEECHHHHHTTTCE--EE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCC--EECGGGSTTCSTTTSSEE
T ss_pred cCHHHHHHHHHHHHHHCCCE--EE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCC--CcCcccCCCCCcccCcce
Confidence 33455666667777777773 43 578999886544 678888888999999999998 888888888 2223333
Q ss_pred ccCCCCCCCC--------CCCCeEEEEcCCCCH------HHHHHHHh----ccCCc-----EEEEEecCceeecccCCCC
Q psy2398 161 HSMDYKSPDQ--------IRNKRVLVVGAGNSG------CDIAVDAS----HHSEK-----VYHSTRRGYHYYPKFIDGK 217 (433)
Q Consensus 161 ~~~~~~~~~~--------~~~~~v~VvG~G~sg------~d~a~~l~----~~~~~-----V~~~~r~~~~~~p~~~~~~ 217 (433)
+.+.+.+... .++++++|||+|.+| +|+|..++ +.+.+ |+++.+.+.. .+....+.
T Consensus 129 ~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~-~~~~l~~~ 207 (437)
T 3sx6_A 129 SICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYI-GHLGIQGV 207 (437)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSST-TCTTTTCC
T ss_pred ecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccc-cccccCcc
Confidence 3222222111 114567899997665 88885554 44543 9999987631 11000110
Q ss_pred ChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeCC
Q psy2398 218 PTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNGN 295 (433)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~~ 295 (433)
+ . ... .+.+ .+....|+ ....|+++++.
T Consensus 208 ~---------~-~~~-----~~~~-----------------------------------~l~~~gI~~~~~~~v~~v~~~ 237 (437)
T 3sx6_A 208 G---------D-SKG-----ILTK-----------------------------------GLKEEGIEAYTNCKVTKVEDN 237 (437)
T ss_dssp T---------T-HHH-----HHHH-----------------------------------HHHHTTCEEECSEEEEEEETT
T ss_pred h---------H-HHH-----HHHH-----------------------------------HHHHCCCEEEcCCEEEEEECC
Confidence 0 0 000 1111 11111344 34567888888
Q ss_pred eEEecC---------CceeeccEEEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccC-------
Q psy2398 296 IVHFVD---------DTHIEVDTIIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAA------- 359 (433)
Q Consensus 296 ~v~~~d---------G~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~------- 359 (433)
.+.+.+ +.++++|.+++|+|++++.++.+.+.+..+.+++.+++.+..+++||||++|||+..+
T Consensus 238 ~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~ 317 (437)
T 3sx6_A 238 KMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPV 317 (437)
T ss_dssp EEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSS
T ss_pred eEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcC
Confidence 877765 6679999999999999875544433443355778888877666999999999998632
Q ss_pred -----ChhhHHHHHHHHHHHHHhhhh
Q psy2398 360 -----GLGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 360 -----~~~~~a~~qa~~~a~~i~g~~ 380 (433)
.....|..||+.+|.+|...+
T Consensus 318 ~~~~pk~~~~A~~qg~~aA~ni~~~l 343 (437)
T 3sx6_A 318 PTGAPKTGYMIESMVSAAVHNIKADL 343 (437)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 356789999999999997543
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.95 E-value=5.6e-29 Score=241.94 Aligned_cols=299 Identities=17% Similarity=0.195 Sum_probs=181.6
Q ss_pred CCcEEEECCChHHHHHHHHHHh-c------CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSE-G------NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNY 79 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~-~------g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (433)
+++|+|||||++|+.+|..|++ . |.+|+|||+.+.+||.|.+.. .
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv-----~----------------------- 54 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGV-----A----------------------- 54 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTS-----C-----------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccccc-----C-----------------------
Confidence 4799999999999999999999 7 999999999988998886541 0
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC-CCCCc
Q psy2398 80 PVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG-YFSGE 158 (433)
Q Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~ 158 (433)
+.++...++..++..++++.++ +++.++.+ +. .|++.++ .+.||+||+|||+. .|+.|++|| .+.+
T Consensus 55 p~~~~~~~~~~~~~~~~~~~~v--~~~~~v~v------~~--~v~~~~~-~~~~d~lViAtG~~-~~~~~~ipG~~~~g- 121 (456)
T 1lqt_A 55 PDHPKIKSISKQFEKTAEDPRF--RFFGNVVV------GE--HVQPGEL-SERYDAVIYAVGAQ-SDRMLNIPGEDLPG- 121 (456)
T ss_dssp TTCTGGGGGHHHHHHHHTSTTE--EEEESCCB------TT--TBCHHHH-HHHSSEEEECCCCC-EECCCCCTTTTSTT-
T ss_pred CCCCCHHHHHHHHHHHHhcCCC--EEEeeEEE------CC--EEEECCC-eEeCCEEEEeeCCC-CCCCCCCCCCCCCC-
Confidence 1223344566777777776665 34445332 11 2344444 37899999999982 267778888 4443
Q ss_pred eeccCCC-----------CCCCCCCCCeEEEEcCCCCHHHHHHHHhcc---------------------CCcEEEEEecC
Q psy2398 159 ILHSMDY-----------KSPDQIRNKRVLVVGAGNSGCDIAVDASHH---------------------SEKVYHSTRRG 206 (433)
Q Consensus 159 ~~~~~~~-----------~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~---------------------~~~V~~~~r~~ 206 (433)
++++.++ ++...+.+++|+|||+|++|+|+|..|++. .++|+++.|++
T Consensus 122 v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 122 SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 4433322 233345789999999999999999999974 36999999987
Q ss_pred ceeecccCCCCChhHHh--Hhhc--------hhhc-C--------chHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCC
Q psy2398 207 YHYYPKFIDGKPTPQWM--LQLG--------NKFS-S--------KEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAH 267 (433)
Q Consensus 207 ~~~~p~~~~~~~~~~~~--~~~p--------~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (433)
... +.+. ..++. ..+| ..+. . +....+..+.+.+....... +.
T Consensus 202 ~~~-~~f~----~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~------- 263 (456)
T 1lqt_A 202 PLQ-AAFT----TLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPR------PG------- 263 (456)
T ss_dssp GGG-CCCC----HHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-C------TT-------
T ss_pred hhh-hccC----hHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCC------CC-------
Confidence 422 1110 00000 0011 0110 0 00000112222222221100 00
Q ss_pred CccChhhhhcccCCCeee--cCCceeeeCC----eEEec----------------CC--ceeeccEEEEccCCCCCCCCC
Q psy2398 268 PIMNSQILYHIGHGDILP--KDDIKNLNGN----IVHFV----------------DD--THIEVDTIIYATGYNRHFPFI 323 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~v~~--~~~v~~~~~~----~v~~~----------------dG--~~~~~D~vi~atG~~~~~~~l 323 (433)
..+|.+ ...+.++.+. .|.+. +| +++++|.||+|+||+|+. +
T Consensus 264 ------------~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l- 329 (456)
T 1lqt_A 264 ------------HRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T- 329 (456)
T ss_dssp ------------SEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-
T ss_pred ------------CceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-
Confidence 002222 1223333221 23332 45 358999999999999985 3
Q ss_pred Ccccccc-cCCccccccccccCCCCcEEEEccccccCC-hhhHHHHHHHHHHHHHhhhh
Q psy2398 324 DKEKLEW-KLGIPDLFIHIAPRNLDNIFFFGFVNAAAG-LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 324 ~~~~~~~-~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~-~~~~a~~qa~~~a~~i~g~~ 380 (433)
. .+.. ..+++.+++....++.|+||++|||...+. .+..+..||+.+|.+|.+..
T Consensus 330 ~--gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 330 P--GLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp T--TSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHH
T ss_pred C--CCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 2 2333 234566666655478999999999986443 45678899999998886553
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=1.2e-28 Score=252.19 Aligned_cols=270 Identities=13% Similarity=0.085 Sum_probs=189.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... ..+.+...
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~---------------------------~~p~~~~~ 442 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES---------------------------ALPGLSAW 442 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH---------------------------TSTTCGGG
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc---------------------------CCCchhHH
Confidence 457999999999999999999999999999999999999876520 01122334
Q ss_pred HHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC------CCCCCCCCCCCCc
Q psy2398 86 SMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV------ARYPNYSGYFSGE 158 (433)
Q Consensus 86 ~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~------p~~p~i~g~~~g~ 158 (433)
.++.+|+...++++ ++ .+++++.| +..++..+.||+||+|||+... |..|+++|.....
T Consensus 443 ~~~~~~~~~~~~~~~gv--~~~~~~~v------------~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~ 508 (690)
T 3k30_A 443 GRVKEYREAVLAELPNV--EIYRESPM------------TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQ 508 (690)
T ss_dssp GHHHHHHHHHHHTCTTE--EEESSCCC------------CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSE
T ss_pred HHHHHHHHHHHHHcCCC--EEEECCee------------cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCc
Confidence 66778888888876 65 35656543 1223345789999999999432 5678888833345
Q ss_pred eeccCCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHH
Q psy2398 159 ILHSMDYKSPDQIRNKRVLVVG--AGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEET 236 (433)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~VvG--~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~ 236 (433)
++++.++.......+++|+||| +|.+|+|+|..|.+.+.+|+++.+.+.. .+... +..+..
T Consensus 509 v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l-~~~~~------------~~~~~~---- 571 (690)
T 3k30_A 509 VLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV-SSWTN------------NTFEVN---- 571 (690)
T ss_dssp EECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST-TGGGG------------GGTCHH----
T ss_pred EEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc-ccccc------------cchhHH----
Confidence 6666665555556788999999 9999999999999999999999987642 11100 000000
Q ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEec-----CCceeeccEEE
Q psy2398 237 MAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFV-----DDTHIEVDTII 311 (433)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~-----dG~~~~~D~vi 311 (433)
.+.+.+. ..++ ++.....|.++++.++.+. +++++++|.||
T Consensus 572 -~l~~~l~--------~~GV-------------------------~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV 617 (690)
T 3k30_A 572 -RIQRRLI--------ENGV-------------------------ARVTDHAVVAVGAGGVTVRDTYASIERELECDAVV 617 (690)
T ss_dssp -HHHHHHH--------HTTC-------------------------EEEESEEEEEEETTEEEEEETTTCCEEEEECSEEE
T ss_pred -HHHHHHH--------HCCC-------------------------EEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEE
Confidence 1111111 0111 3334556778877665543 45579999999
Q ss_pred EccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhh
Q psy2398 312 YATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAF 379 (433)
Q Consensus 312 ~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~ 379 (433)
+|||++|+..+++..... +. .++.|+||++|||.... .+..|..||+.+|.+|.+.
T Consensus 618 ~A~G~~p~~~l~~~l~~~---~~--------~t~~~~VyaiGD~~~~~-~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 618 MVTARLPREELYLDLVAR---RD--------AGEIASVRGIGDAWAPG-TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp EESCEEECCHHHHHHHHH---HH--------HTSCSEEEECGGGTSCB-CHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCCChHHHHHHhhh---hc--------ccCCCCEEEEeCCCchh-hHHHHHHHHHHHHHHHHhh
Confidence 999999998766531111 00 67899999999998744 4456999999999999876
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.95 E-value=1.7e-29 Score=248.76 Aligned_cols=307 Identities=14% Similarity=0.178 Sum_probs=185.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCc-cccceEeecCCCcccCCCCCCCCCC---
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGR-VYPSLHLISPKFNTQVPDYPMPDNY--- 79 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 79 (433)
..+||+|||||++|+++|..|++. |.+|+|||+.+.++.... +.+. .+....... .....|..++.....
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~---~lsk~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP---PLSKELWFSDDPNV-TKTLRFKQWNGKERSIYF 85 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG---GGGTGGGCC--CTH-HHHCEEECTTSCEEESBS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC---CCCHHhhcCCccch-hhcccccccccccccccc
Confidence 457999999999999999999887 889999999876541110 0000 000000000 000001011000000
Q ss_pred ---CCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCC-
Q psy2398 80 ---PVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYF- 155 (433)
Q Consensus 80 ---~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~- 155 (433)
..+....++.+ ..+.++ .++++++|+.++.+. ++|++.+|.++.||+||+|||+ .|+.|++++..
T Consensus 86 ~~~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~--~~V~~~~g~~i~yd~lviATGs--~p~~~~~~~~~~ 154 (493)
T 1m6i_A 86 QPPSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD--NMVKLNDGSQITYEKCLIATGG--TPRSLSAIDRAG 154 (493)
T ss_dssp SCGGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG--TEEEETTSCEEEEEEEEECCCE--EECCCHHHHTSC
T ss_pred cchHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCC--CCCCCCCccccc
Confidence 00111111000 112344 467788999988643 4678888888999999999998 77777655411
Q ss_pred ---CCceeccCCCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHhc----cCCcEEEEEecCceeecccCCCCChhHHh
Q psy2398 156 ---SGEILHSMDYKSPD-----QIRNKRVLVVGAGNSGCDIAVDASH----HSEKVYHSTRRGYHYYPKFIDGKPTPQWM 223 (433)
Q Consensus 156 ---~g~~~~~~~~~~~~-----~~~~~~v~VvG~G~sg~d~a~~l~~----~~~~V~~~~r~~~~~~p~~~~~~~~~~~~ 223 (433)
...+.......+.. ...+++|+|||+|.+|+|+|..|++ .+.+|+++.+++.+ +++.
T Consensus 155 ~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-~~~~---------- 223 (493)
T 1m6i_A 155 AEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-MGKI---------- 223 (493)
T ss_dssp HHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST-TTTT----------
T ss_pred ccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc-cccc----------
Confidence 11121111111100 1247899999999999999999987 36789998876531 1111
Q ss_pred HhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C--eEEe
Q psy2398 224 LQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N--IVHF 299 (433)
Q Consensus 224 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~--~v~~ 299 (433)
+|..+.. .+.+ .+. ..++ ++.....|+++.+ . .|.+
T Consensus 224 --l~~~~~~-----~~~~----~l~----~~GV-------------------------~v~~~~~V~~i~~~~~~~~v~l 263 (493)
T 1m6i_A 224 --LPEYLSN-----WTME----KVR----REGV-------------------------KVMPNAIVQSVGVSSGKLLIKL 263 (493)
T ss_dssp --SCHHHHH-----HHHH----HHH----TTTC-------------------------EEECSCCEEEEEEETTEEEEEE
T ss_pred --CCHHHHH-----HHHH----HHH----hcCC-------------------------EEEeCCEEEEEEecCCeEEEEE
Confidence 1111111 1111 111 1111 2333456676642 2 4678
Q ss_pred cCCceeeccEEEEccCCCCCCCCCCccccccc--CCccccccccccCCCCcEEEEccccccC---------ChhhHHHHH
Q psy2398 300 VDDTHIEVDTIIYATGYNRHFPFIDKEKLEWK--LGIPDLFIHIAPRNLDNIFFFGFVNAAA---------GLGDGLRLQ 368 (433)
Q Consensus 300 ~dG~~~~~D~vi~atG~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~p~i~~iG~~~~~~---------~~~~~a~~q 368 (433)
.||+++++|.||+|+|++|+..+++...+..+ .+++.++..+ .+ .|+||++|||+... ..+..|..|
T Consensus 264 ~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l-~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~q 341 (493)
T 1m6i_A 264 KDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAEL-QA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVS 341 (493)
T ss_dssp TTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTC-EE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHH
T ss_pred CCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCc-cc-CCCeeEeeeeEeccCcccCccccchHHHHHHH
Confidence 89999999999999999999988876556554 3567666654 44 69999999998531 235689999
Q ss_pred HHHHHHHHhhhh
Q psy2398 369 GQFIRSYIQAFI 380 (433)
Q Consensus 369 a~~~a~~i~g~~ 380 (433)
|+.+|.++.|..
T Consensus 342 g~~aa~ni~g~~ 353 (493)
T 1m6i_A 342 GRLAGENMTGAA 353 (493)
T ss_dssp HHHHHHHHTSCC
T ss_pred HHHHHHHhcCCC
Confidence 999999999863
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=5.5e-28 Score=248.27 Aligned_cols=279 Identities=16% Similarity=0.153 Sum_probs=180.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.+.. .++ .+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~----~~p-----------------------g~~~~ 440 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA----ALP-----------------------GLGEW 440 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT----TST-----------------------TCGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc----cCC-----------------------ChHHH
Confidence 357999999999999999999999999999999999999887631 011 11223
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC------CCCCCCCC--CCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV------ARYPNYSG--YFSG 157 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~------p~~p~i~g--~~~g 157 (433)
..+.+|+...++.+. ..+..++.+.. + ..++++++..+.||+||+|||+... |..|+++| .+..
T Consensus 441 ~~~~~~~~~~i~~~~-----~~~~~~v~i~~-~--~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~ 512 (729)
T 1o94_A 441 SYHRDYRETQITKLL-----KKNKESQLALG-Q--KPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLP 512 (729)
T ss_dssp HHHHHHHHHHHHHHH-----HHSTTCEEECS-C--CCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTST
T ss_pred HHHHHHHHHHHHHhh-----cccCCceEEEe-C--eEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCC
Confidence 455566655555430 00111111111 1 1233344445789999999999432 56788888 3345
Q ss_pred ceeccCCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchH
Q psy2398 158 EILHSMDYKSPDQIRNKRVLVVG--AGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEE 235 (433)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~VvG--~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~ 235 (433)
.++++.++.......+++|+||| +|.+|+|+|..|++.+.+|+++.+++ +.++.. ++.. ..
T Consensus 513 ~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~-----------~~~~-~~--- 575 (729)
T 1o94_A 513 DQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMH-----------FTLE-YP--- 575 (729)
T ss_dssp TEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHH-----------HTTC-HH---
T ss_pred CEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--cccccc-----------cccc-HH---
Confidence 56666555444455689999999 99999999999999999999999886 222100 0000 00
Q ss_pred HHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEe----cCC-ce------
Q psy2398 236 TMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHF----VDD-TH------ 304 (433)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~----~dG-~~------ 304 (433)
.+.+.+. ..++ ++.....+.++.+..+.+ .++ ++
T Consensus 576 --~~~~~l~--------~~GV-------------------------~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~ 620 (729)
T 1o94_A 576 --NMMRRLH--------ELHV-------------------------EELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPG 620 (729)
T ss_dssp --HHHHHHH--------HTTC-------------------------EEECSEEEEEEETTEEEEEETTCSCSCCCCCCTT
T ss_pred --HHHHHHH--------hCCC-------------------------EEEcCcEEEEEECCeEEEEEecCCceEEeccccc
Confidence 1111111 0111 122233455555544433 232 22
Q ss_pred ------------eeccEEEEccCCCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHH
Q psy2398 305 ------------IEVDTIIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFI 372 (433)
Q Consensus 305 ------------~~~D~vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~ 372 (433)
+++|.||+|+|++|+..+++... . .. +..+.++.|+||++|||.. +..+..|..||+.+
T Consensus 621 ~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~--~-----~v-d~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~a 691 (729)
T 1o94_A 621 VSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELK--A-----RE-SEWAENDIKGIYLIGDAEA-PRLIADATFTGHRV 691 (729)
T ss_dssp SCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHH--H-----TG-GGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHH
T ss_pred ccccccCCcceeeeCCEEEECCCCCCChHHHHHHh--h-----hc-ccccccCCCCeEEEeCccc-hhhHHHHHHHHHHH
Confidence 89999999999999988765211 1 11 2345678999999999986 45566799999999
Q ss_pred HHHHhhhh
Q psy2398 373 RSYIQAFI 380 (433)
Q Consensus 373 a~~i~g~~ 380 (433)
|.+|.+..
T Consensus 692 A~~i~~~l 699 (729)
T 1o94_A 692 AREIEEAN 699 (729)
T ss_dssp HHTTTSSC
T ss_pred HHHhhhhc
Confidence 99997753
No 86
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.94 E-value=1e-27 Score=233.33 Aligned_cols=163 Identities=19% Similarity=0.301 Sum_probs=115.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
..+++|+|||||++|+.+|..|++.| .+|+|||+.+.+||.|.+.. . +.+
T Consensus 4 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~-----~-----------------------p~~ 55 (460)
T 1cjc_A 4 EQTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGV-----A-----------------------PDH 55 (460)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTS-----C-----------------------TTC
T ss_pred CCCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeeccc-----C-----------------------CCC
Confidence 34689999999999999999999998 89999999998888886541 0 112
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC-CCCCceec
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG-YFSGEILH 161 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~~ 161 (433)
+...++..++.+++++.++ .+++++.|. . .|++.+. .+.||+||+|||+. .++.|++|| ...+ +++
T Consensus 56 ~~~~~~~~~~~~~~~~~gv--~~~~~~~v~------~--~V~~~~~-~~~~d~lVlAtGs~-~~~~~~ipG~~~~g-v~~ 122 (460)
T 1cjc_A 56 PEVKNVINTFTQTARSDRC--AFYGNVEVG------R--DVTVQEL-QDAYHAVVLSYGAE-DHQALDIPGEELPG-VFS 122 (460)
T ss_dssp GGGGGHHHHHHHHHTSTTE--EEEBSCCBT------T--TBCHHHH-HHHSSEEEECCCCC-EECCCCCTTTTSTT-EEE
T ss_pred ccHHHHHHHHHHHHHhCCc--EEEeeeEEe------e--EEEeccc-eEEcCEEEEecCcC-CCCCCCCCCCCCCc-EEE
Confidence 2234566777777777776 466665541 1 2333332 36899999999993 247788888 4333 333
Q ss_pred cCCC----------CCCC-CCCCCeEEEEcCCCCHHHHHHHHh--------------------ccCC-cEEEEEecCce
Q psy2398 162 SMDY----------KSPD-QIRNKRVLVVGAGNSGCDIAVDAS--------------------HHSE-KVYHSTRRGYH 208 (433)
Q Consensus 162 ~~~~----------~~~~-~~~~~~v~VvG~G~sg~d~a~~l~--------------------~~~~-~V~~~~r~~~~ 208 (433)
+.++ .... .+.+++|+|||+|++|+|+|..|+ +.+. +|+++.|++..
T Consensus 123 ~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 123 ARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp HHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred HHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 3222 1211 346899999999999999999999 4454 79999998753
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.94 E-value=5.9e-27 Score=246.88 Aligned_cols=279 Identities=14% Similarity=0.143 Sum_probs=186.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|. ..+ ... ++ . ....
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~~~------k~~---------i~---------~-~~~~ 181 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-DTA------GEQ---------ID---------G-MDSS 181 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-GSS------CCE---------ET---------T-EEHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-cCC------ccc---------cC---------C-CCHH
Confidence 46899999999999999999999999999999999999887 310 000 00 0 1123
Q ss_pred HHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCC---------eEEEEE------ccCcEEEeCEEEEccCCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYED---------IWEVEL------SNGKKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 87 ~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~---------~~~v~~------~~g~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
++...+.+....+ ++ .++.+++|..+...+. .+.+.+ .++..+.||+||+|||+ .|+.|+
T Consensus 182 ~~~~~~~~~l~~~~~v--~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs--~p~~~~ 257 (965)
T 2gag_A 182 AWIEQVTSELAEAEET--THLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA--HERPIV 257 (965)
T ss_dssp HHHHHHHHHHHHSTTE--EEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE--EECCCC
T ss_pred HHHHHHHHHHhhcCCc--EEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCC--ccCCCC
Confidence 4444444444444 55 4777888888764221 111211 11235899999999998 788888
Q ss_pred CCC-CCCCceeccCCC---C-CCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHh
Q psy2398 151 YSG-YFSGEILHSMDY---K-SPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQ 225 (433)
Q Consensus 151 i~g-~~~g~~~~~~~~---~-~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 225 (433)
++| ...+ ++++..+ . .....++++|+|||+|.+|+|+|..|++.|.+|+++.+++... +
T Consensus 258 ipG~~~~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-~-------------- 321 (965)
T 2gag_A 258 FENNDRPG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-A-------------- 321 (965)
T ss_dssp CBTCCSTT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-H--------------
T ss_pred CCCCCCCC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-h--------------
Confidence 988 4333 3333211 1 1123457899999999999999999999999999999886421 0
Q ss_pred hchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC--C----eEEe
Q psy2398 226 LGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG--N----IVHF 299 (433)
Q Consensus 226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~--~----~v~~ 299 (433)
. .+.+. ..++ ++.....+.++.+ . .|.+
T Consensus 322 ------------~-~~~l~--------~~GV-------------------------~v~~~~~v~~i~~~~~~~v~~v~~ 355 (965)
T 2gag_A 322 ------------A-AAQAV--------ADGV-------------------------QVISGSVVVDTEADENGELSAIVV 355 (965)
T ss_dssp ------------H-HHHHH--------HTTC-------------------------CEEETEEEEEEEECTTSCEEEEEE
T ss_pred ------------h-HHHHH--------hCCe-------------------------EEEeCCEeEEEeccCCCCEEEEEE
Confidence 0 00000 1112 3333444555543 1 4666
Q ss_pred cC-------C--ceeeccEEEEccCCCCCCCCCCcccccccCCccccccccc----cCCCCcEEEEccccccCChhhHHH
Q psy2398 300 VD-------D--THIEVDTIIYATGYNRHFPFIDKEKLEWKLGIPDLFIHIA----PRNLDNIFFFGFVNAAAGLGDGLR 366 (433)
Q Consensus 300 ~d-------G--~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~p~i~~iG~~~~~~~~~~~a~ 366 (433)
.+ | +++++|.||+|+|++|+..++... ++.+.+++.+. .++.|+||++|||+....+ ..|.
T Consensus 356 ~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l-~~A~ 429 (965)
T 2gag_A 356 AELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT-ASAL 429 (965)
T ss_dssp EEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH-HHHH
T ss_pred EeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCCCCCEEEEEecCCchhH-HHHH
Confidence 54 5 568999999999999998876532 23333333322 3789999999999876555 4899
Q ss_pred HHHHHHHHHHhhhhcCC
Q psy2398 367 LQGQFIRSYIQAFIRKS 383 (433)
Q Consensus 367 ~qa~~~a~~i~g~~~lp 383 (433)
.||+.+|.++.+.....
T Consensus 430 ~~G~~aA~~i~~~lg~~ 446 (965)
T 2gag_A 430 STGAATGAAAATAAGFA 446 (965)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999998876543
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=5.8e-27 Score=239.21 Aligned_cols=289 Identities=15% Similarity=0.165 Sum_probs=177.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... .. +.....
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~----~~-----------------------~~~~~~ 424 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK----QI-----------------------PGKEEF 424 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT----TS-----------------------TTCTTH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc----cC-----------------------CCHHHH
Confidence 357999999999999999999999999999999999999876430 00 011123
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEE-EeCEEEEccCCCCCCCCCCCCCCCCCceeccCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKK-KYDFIAVCNGAQRVARYPNYSGYFSGEILHSMD 164 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~-~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~ 164 (433)
.++.+++...++++++ .+++++.|.. ..+ .||+||+|||+ .|+.|+++|.-...+++..+
T Consensus 425 ~~~~~~~~~~~~~~gv--~~~~~~~v~~---------------~~~~~~d~lviAtG~--~p~~~~i~G~~~~~v~~~~~ 485 (671)
T 1ps9_A 425 YETLRYYRRMIEVTGV--TLKLNHTVTA---------------DQLQAFDETILASGI--VPRTPPIDGIDHPKVLSYLD 485 (671)
T ss_dssp HHHHHHHHHHHHHHTC--EEEESCCCCS---------------SSSCCSSEEEECCCE--EECCCCCBTTTSTTEEEHHH
T ss_pred HHHHHHHHHHHHHcCC--EEEeCcEecH---------------HHhhcCCEEEEccCC--CcCCCCCCCCCCCcEeeHHH
Confidence 4556677777777787 4777765421 124 89999999998 88999999832234555554
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec--CceeecccCCCCChhHHhHhhchhhcCchHHHHHHHH
Q psy2398 165 YKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR--GYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQ 242 (433)
Q Consensus 165 ~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~--~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (433)
+.......+++|+|||+|.+|+|+|..|++.|.+|+++... ..|-......... .+....|..
T Consensus 486 ~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~--~~~~~~~~~------------- 550 (671)
T 1ps9_A 486 VLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAG--GLSPQGMQI------------- 550 (671)
T ss_dssp HHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGG--GBCTTCCCC-------------
T ss_pred HhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccc--ccccccccc-------------
Confidence 44444566899999999999999999999988766542100 0000000000000 000000000
Q ss_pred HHHHhcCCCCcCCCCCCCCCCCC--CCCccChhhhhcccCCCeee--cCCceeeeCCeEEe-cCC--ceeeccEEEEccC
Q psy2398 243 VFKLAGFDGVDYGLKKPDHPLDA--AHPIMNSQILYHIGHGDILP--KDDIKNLNGNIVHF-VDD--THIEVDTIIYATG 315 (433)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~--~~~v~~~~~~~v~~-~dG--~~~~~D~vi~atG 315 (433)
.......-+..+...... ..+.....+.+.+....|++ ...++++++.++.+ .+| +++++|.||+|+|
T Consensus 551 -----~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G 625 (671)
T 1ps9_A 551 -----PRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAG 625 (671)
T ss_dssp -----CCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCC
T ss_pred -----CCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCC
Confidence 000000000000000000 00001111223333335554 45577888777777 688 5699999999999
Q ss_pred CCCCCCCCCcccccccCCccccccccccCCCCcEEEEccccccCC-hhhHHHHHHHHHHHHH
Q psy2398 316 YNRHFPFIDKEKLEWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG-LGDGLRLQGQFIRSYI 376 (433)
Q Consensus 316 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~-~~~~a~~qa~~~a~~i 376 (433)
++|+..+++.. ....++||++|||..... ....|..||+.+|.+|
T Consensus 626 ~~p~~~l~~~l----------------~~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 626 QEPNRALAQPL----------------IDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp EEECCTTHHHH----------------HTTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHH----------------HhcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 99998876521 112378999999986543 4678999999999864
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.93 E-value=9.6e-27 Score=225.79 Aligned_cols=285 Identities=16% Similarity=0.155 Sum_probs=176.1
Q ss_pred CcEEEECCChHHHHHHHHHHh--cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSE--GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~--~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
+||+|||||++|+++|..|++ .|++|+|||+++..++.... +... . .....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~--------~~~~---~----------------g~~~~ 55 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF--------PHLA---M----------------GWRKF 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH--------HHHH---H----------------TCSCG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc--------chhc---c----------------CccCH
Confidence 699999999999999999999 78999999998765421100 0000 0 00000
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDY 165 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~ 165 (433)
.++...+...+++.++ ++. ..+|+.++.+.. .|++.++.++.||+||+|||+ .|..|.+.. .+...+....
T Consensus 56 ~~~~~~~~~~~~~~gv--~~~-~~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~--~~~~pg~~~--~g~~~~~~~~ 126 (430)
T 3h28_A 56 EDISVPLAPLLPKFNI--EFI-NEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGP--KLVFGAEGQ--EENSTSICTA 126 (430)
T ss_dssp GGSEEESTTTGGGGTE--EEE-CSCEEEEETTTT--EEEETTCCEEECSEEEECCCC--EEECCSBTH--HHHSCCCSSH
T ss_pred HHHHHHHHHHHHhcCC--EEE-EEEEEEEECCCC--EEEECCCcEEECCEEEEcCCc--ccccCCCCC--cCCccCcCCH
Confidence 1111112223334455 244 458888876444 677788888999999999998 666663321 1111111111
Q ss_pred CCCCC--------CCCCeEEEEcCCCCH------HHHHHHHh----ccC----CcEEEEEecCceeecccCCCCChhHHh
Q psy2398 166 KSPDQ--------IRNKRVLVVGAGNSG------CDIAVDAS----HHS----EKVYHSTRRGYHYYPKFIDGKPTPQWM 223 (433)
Q Consensus 166 ~~~~~--------~~~~~v~VvG~G~sg------~d~a~~l~----~~~----~~V~~~~r~~~~~~p~~~~~~~~~~~~ 223 (433)
.+... .++++++|||+|.+| +|+|..++ +.+ .+|+++.+.+.. .+....+.+
T Consensus 127 ~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~-~~~~l~~~~----- 200 (430)
T 3h28_A 127 EHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYL-GHFGVGGIG----- 200 (430)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSST-TCTTTTCST-----
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccc-cccccCcch-----
Confidence 11100 124567899998765 88886554 344 478888876531 000000000
Q ss_pred HhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee--ecCCceeeeCCeEEecC
Q psy2398 224 LQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL--PKDDIKNLNGNIVHFVD 301 (433)
Q Consensus 224 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~v~~~~~~~v~~~d 301 (433)
. ... .+. +.+....|+ ....|+++++..+.+++
T Consensus 201 ----~-~~~-----~l~-----------------------------------~~l~~~GV~i~~~~~v~~v~~~~v~~~~ 235 (430)
T 3h28_A 201 ----A-SKR-----LVE-----------------------------------DLFAERNIDWIANVAVKAIEPDKVIYED 235 (430)
T ss_dssp ----T-HHH-----HHH-----------------------------------HHHHHTTCEEECSCEEEEECSSEEEEEC
T ss_pred ----H-HHH-----HHH-----------------------------------HHHHHCCCEEEeCCEEEEEeCCeEEEEe
Confidence 0 000 111 111111343 45678888888888887
Q ss_pred ----CceeeccEEEEccCCCCCCCCCCc--ccccccCC-ccccccccccCCCCcEEEEcccccc------------CChh
Q psy2398 302 ----DTHIEVDTIIYATGYNRHFPFIDK--EKLEWKLG-IPDLFIHIAPRNLDNIFFFGFVNAA------------AGLG 362 (433)
Q Consensus 302 ----G~~~~~D~vi~atG~~~~~~~l~~--~~~~~~~~-~~~~~~~~~~~~~p~i~~iG~~~~~------------~~~~ 362 (433)
|+++++|.||+|+|++++. ++.. ..+....+ ++.+++.+..+++||||++|||+.. +...
T Consensus 236 ~~~~g~~i~~D~vv~a~G~~~~~-~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~ 314 (430)
T 3h28_A 236 LNGNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTG 314 (430)
T ss_dssp TTSCEEEEECSEEEEECEEECCH-HHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCH
T ss_pred cCCCceEEeeeEEEECCCCccch-hHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchH
Confidence 7889999999999999873 3332 23433456 7888887766699999999999864 2356
Q ss_pred hHHHHHHHHHHHHHhhhh
Q psy2398 363 DGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 363 ~~a~~qa~~~a~~i~g~~ 380 (433)
..|..||+.+|++|...+
T Consensus 315 ~~A~~~g~~aa~ni~~~l 332 (430)
T 3h28_A 315 MMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 789999999999987654
No 90
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.93 E-value=5.9e-25 Score=211.52 Aligned_cols=293 Identities=13% Similarity=0.104 Sum_probs=176.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.++|+|||||++|+++|..|++.+ .+|+|||+++..... + .+... ..... .
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-----p---~~~~v----~~g~~---------------~ 54 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-----Y---MSNEV----IGGDR---------------E 54 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-----T---THHHH----HHTSS---------------C
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-----c---CHHHH----hcCCC---------------C
Confidence 368999999999999999998875 589999987642110 0 00000 00000 0
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCC-Cceec
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFS-GEILH 161 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~-g~~~~ 161 (433)
..++..-+.. ....++. ....+|+.|+++.+ ++++.++.++.||+||+|||+ .+..|+++| ... ....|
T Consensus 55 ~~~~~~~~~~-~~~~gv~---~i~~~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~--~~~~~~i~G~~e~~~~~~~~ 126 (401)
T 3vrd_B 55 LASLRVGYDG-LRAHGIQ---VVHDSALGIDPDKK--LVKTAGGAEFAYDRCVVAPGI--DLLYDKIEGYSEALAAKLPH 126 (401)
T ss_dssp GGGGEECSHH-HHHTTCE---EECSCEEEEETTTT--EEEETTSCEEECSEEEECCCE--EECGGGSBTCCSGGGGTSCC
T ss_pred HHHHhhCHHH-HHHCCCE---EEEeEEEEEEccCc--EEEecccceeecceeeeccCC--ccccCCccCchhhcccCccc
Confidence 0000000111 2234552 33568888887444 677888889999999999998 888888888 211 12223
Q ss_pred cCCCCCC--------CCCCCCeEEEEcCCCC-------HHH----HHHHHhcc--CCcEEEEEecCceeecccCCCCChh
Q psy2398 162 SMDYKSP--------DQIRNKRVLVVGAGNS-------GCD----IAVDASHH--SEKVYHSTRRGYHYYPKFIDGKPTP 220 (433)
Q Consensus 162 ~~~~~~~--------~~~~~~~v~VvG~G~s-------g~d----~a~~l~~~--~~~V~~~~r~~~~~~p~~~~~~~~~ 220 (433)
+....+. ..+.....+|+++|.. +.| ++..+.+. ..+|+++.+.+.....
T Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~--------- 197 (401)
T 3vrd_B 127 AWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQ--------- 197 (401)
T ss_dssp CSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTH---------
T ss_pred eeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccccc---------
Confidence 2221111 1123344455554432 334 44444433 4678888766532100
Q ss_pred HHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeee----CCe
Q psy2398 221 QWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLN----GNI 296 (433)
Q Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~----~~~ 296 (433)
. .+.+.+.+.+....+..++ ++.....+..++ ...
T Consensus 198 -------~---------~~~~~~~~~~~~~l~~~gi-------------------------~v~~~~~v~~v~~~~~~~~ 236 (401)
T 3vrd_B 198 -------A---------QFTKGWERLYGFGTENALI-------------------------EWHPGPDAAVVKTDTEAMT 236 (401)
T ss_dssp -------H---------HHHHHHHHHSCTTSTTCSE-------------------------EEECTTTTCEEEEETTTTE
T ss_pred -------c---------cccHHHHHHHHHHHHhcCc-------------------------EEEeCceEEEEEecccceE
Confidence 0 1222222222222222222 233344454443 356
Q ss_pred EEecCCceeeccEEEEccCCCCCCCCCCcccccccCCccccccc-cccCCCCcEEEEcccccc---CChhhHHHHHHHHH
Q psy2398 297 VHFVDDTHIEVDTIIYATGYNRHFPFIDKEKLEWKLGIPDLFIH-IAPRNLDNIFFFGFVNAA---AGLGDGLRLQGQFI 372 (433)
Q Consensus 297 v~~~dG~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~p~i~~iG~~~~~---~~~~~~a~~qa~~~ 372 (433)
+.+.||+++++|.+++++|.+|+ +++....+..+.+++.+++. +..+++||||++|||+.. +...+.|..||+.+
T Consensus 237 v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~ 315 (401)
T 3vrd_B 237 VETSFGETFKAAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVA 315 (401)
T ss_dssp EEETTSCEEECSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHH
T ss_pred EEcCCCcEEEeeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHH
Confidence 88999999999999999999987 66665666556678888877 567899999999999753 34567899999999
Q ss_pred HHHHh----hhhcCCCc
Q psy2398 373 RSYIQ----AFIRKSKG 385 (433)
Q Consensus 373 a~~i~----g~~~lp~~ 385 (433)
|++|. |+...|..
T Consensus 316 A~ni~~~l~G~~~~~~~ 332 (401)
T 3vrd_B 316 AAAVVALLKGEEPGTPS 332 (401)
T ss_dssp HHHHHHHHHTCCCCCCC
T ss_pred HHHHHHHhcCCCCCCcc
Confidence 99886 44444544
No 91
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=1.1e-25 Score=238.96 Aligned_cols=291 Identities=17% Similarity=0.200 Sum_probs=176.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.+||+||||||+|+++|..|++.|+ +|+|||+.+.+||.+.+..+ .+...
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip-----------------------------~~~~~ 237 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIP-----------------------------QFRLP 237 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSC-----------------------------TTTSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCC-----------------------------cccCC
Confidence 4699999999999999999999999 79999999899998755411 11112
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCC-CC-CCCCceeccC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNY-SG-YFSGEILHSM 163 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i-~g-~~~g~~~~~~ 163 (433)
.++.++..++.+++++ .+++++.+.. ..+++.++..+.||+||+|||+. .|+.+++ +| .....++++.
T Consensus 238 ~~~~~~~~~~~~~~gv--~~~~~~~v~~-------~~v~~~~~~~~~~d~vvlAtGa~-~p~~l~~~~G~~~~~gv~~a~ 307 (1025)
T 1gte_A 238 YDVVNFEIELMKDLGV--KIICGKSLSE-------NEITLNTLKEEGYKAAFIGIGLP-EPKTDDIFQGLTQDQGFYTSK 307 (1025)
T ss_dssp HHHHHHHHHHHHTTTC--EEEESCCBST-------TSBCHHHHHHTTCCEEEECCCCC-EECCCGGGTTCCTTTTEEEHH
T ss_pred HHHHHHHHHHHHHCCc--EEEcccEecc-------ceEEhhhcCccCCCEEEEecCCC-CCCCCCCCCCCCCCCCEEEhH
Confidence 3455666667777777 4777765521 12333344447899999999983 3554443 33 1111233222
Q ss_pred CC--------------CC-CCCCCCCeEEEEcCCCCHHHHHHHHhccCC-cEEEEEecCceeecccCCCCChhHHhHhhc
Q psy2398 164 DY--------------KS-PDQIRNKRVLVVGAGNSGCDIAVDASHHSE-KVYHSTRRGYHYYPKFIDGKPTPQWMLQLG 227 (433)
Q Consensus 164 ~~--------------~~-~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p 227 (433)
++ .. .....+++|+|||+|.+|+|+|..+.+.|. +||+++|++...+|...
T Consensus 308 ~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~------------- 374 (1025)
T 1gte_A 308 DFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVP------------- 374 (1025)
T ss_dssp HHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCH-------------
T ss_pred HHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCH-------------
Confidence 11 11 112236799999999999999999999985 89999998743333210
Q ss_pred hhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcc-cCCCee-ecCCceeee--CCeEEecCC-
Q psy2398 228 NKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHI-GHGDIL-PKDDIKNLN--GNIVHFVDD- 302 (433)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~-~~~~v~~~~--~~~v~~~dG- 302 (433)
...+... ..++. ...+....+.. ..+++. +.-.-.+.+ +..+.. +|
T Consensus 375 ----------~e~~~~~--------~~Gv~----------~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~-~g~ 425 (1025)
T 1gte_A 375 ----------EEVELAK--------EEKCE----------FLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNED-EDQ 425 (1025)
T ss_dssp ----------HHHHHHH--------HTTCE----------EECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEE-EEE
T ss_pred ----------HHHHHHH--------HcCCE----------EEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccC-CCc
Confidence 0001100 00110 00000000000 011111 000000000 111111 22
Q ss_pred -ceeeccEEEEccCCCCC-CCCCCc-cccccc-CCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhh
Q psy2398 303 -THIEVDTIIYATGYNRH-FPFIDK-EKLEWK-LGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQA 378 (433)
Q Consensus 303 -~~~~~D~vi~atG~~~~-~~~l~~-~~~~~~-~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g 378 (433)
.++++|.||+|+|++|+ ..++.. ..+..+ .+++.+++..+.|+.|+||++||+...+.....|..||+.+|.+|.+
T Consensus 426 ~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 426 IVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp EEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 35899999999999875 344432 234443 45677766566889999999999998667778899999999999975
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=7.8e-25 Score=215.49 Aligned_cols=256 Identities=17% Similarity=0.212 Sum_probs=173.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
++||+|||||++|+++|..|++. .+|+|||+.+.+||.|.... +. ...+ +. ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~-----~~---------~~g~---------~~--~~~ 161 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKG-----IK---------QEGF---------NK--DSR 161 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTC-----SE---------ETTT---------TE--EHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccc-----cc---------cCCC---------CC--CHH
Confidence 36899999999999999999999 99999999999999877541 00 0000 01 223
Q ss_pred HHHHHHHHHHHHc--CCCcceEeCcEEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEccCCCCCCCCCCCCC-CCCCcee
Q psy2398 87 MMLDYLRSYAKKF--DVYNHSIFNTEVINLEQYEDIWEVEL-SNGK--KKKYDFIAVCNGAQRVARYPNYSG-YFSGEIL 160 (433)
Q Consensus 87 ~~~~~l~~~~~~~--~~~~~i~~~~~V~~v~~~~~~~~v~~-~~g~--~~~~d~vIvAtG~~s~p~~p~i~g-~~~g~~~ 160 (433)
++. ..+.+.+ ++ .++++++|..++.+++.+.+.. .++. .+.||+||+|||+ .|..|+++| ...+ ++
T Consensus 162 ~~~---~~l~~~l~~~v--~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa--~~~~~~~~g~~~~g-v~ 233 (493)
T 1y56_A 162 KVV---EELVGKLNENT--KIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA--IDSTMLFENNDMPG-VF 233 (493)
T ss_dssp HHH---HHHHHTCCTTE--EEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE--EECCCCCTTTTSTT-EE
T ss_pred HHH---HHHHHHHhcCC--EEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC--CccCCCCCCCCCCC-EE
Confidence 333 3333333 44 4677899999988766666654 3443 5899999999998 788888888 4333 33
Q ss_pred ccCCCC---C-CCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHH
Q psy2398 161 HSMDYK---S-PDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEET 236 (433)
Q Consensus 161 ~~~~~~---~-~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~ 236 (433)
+..++. . ....++++++|+|+|.+|+| ..+.+.|-+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV~v~~----------------------------------- 276 (493)
T 1y56_A 234 RRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWGIDYVH----------------------------------- 276 (493)
T ss_dssp EHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTCEEEE-----------------------------------
T ss_pred EcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCcEEEe-----------------------------------
Confidence 222111 0 11345789999999999998 333333333221
Q ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----CeEEecCCceeeccEEEE
Q psy2398 237 MAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----NIVHFVDDTHIEVDTIIY 312 (433)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~~v~~~dG~~~~~D~vi~ 312 (433)
...+.++.+ ..+.+++|+++++|.||+
T Consensus 277 -------------------------------------------------~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~ 307 (493)
T 1y56_A 277 -------------------------------------------------IPNVKRVEGNEKVERVIDMNNHEYKVDALIF 307 (493)
T ss_dssp -------------------------------------------------CSSEEEEECSSSCCEEEETTCCEEECSEEEE
T ss_pred -------------------------------------------------CCeeEEEecCCceEEEEeCCCeEEEeCEEEE
Confidence 112222221 235678899999999999
Q ss_pred ccCCCCCCCCCCcccccc---cCCccccccccccCCCCcEEEEccccccCChhhHHHHHHHHHHHHHhhhhcCCC
Q psy2398 313 ATGYNRHFPFIDKEKLEW---KLGIPDLFIHIAPRNLDNIFFFGFVNAAAGLGDGLRLQGQFIRSYIQAFIRKSK 384 (433)
Q Consensus 313 atG~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~~~~~a~~qa~~~a~~i~g~~~lp~ 384 (433)
|+|++|+..++....+.. ..+++...+..+. +.|+||++||++.. ..+..|..||+.+|.++.+...+..
T Consensus 308 a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~~lg~~~ 380 (493)
T 1y56_A 308 ADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILKEFGYDA 380 (493)
T ss_dssp CCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 999999988876554432 2344442333334 78999999999874 4567899999999999998765543
No 93
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.91 E-value=1.4e-25 Score=217.27 Aligned_cols=284 Identities=16% Similarity=0.197 Sum_probs=162.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
++|+|||||++|+++|..|++.+ ++|+|||+++... |..+.......... .
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~------------~~p~l~~v~~g~~~---------------~ 55 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG------------FTPAFPHLAMGWRK---------------F 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE------------CGGGHHHHHHTCSC---------------G
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc------------cCccHHHHhcCCCC---------------H
Confidence 58999999999999999999865 7899999986431 11000000000000 0
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCCCCCCceeccCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSGYFSGEILHSMDY 165 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g~~~g~~~~~~~~ 165 (433)
+++...++.+.++.++ ++ ...+|+.|+.+.+ +|++++|+++.||+||+|||+ .+. ++++|. .. |...+
T Consensus 56 ~~i~~~~~~~~~~~gv--~~-i~~~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~--~~~-~~i~G~-~e---~~~~~ 123 (430)
T 3hyw_A 56 EDISVPLAPLLPKFNI--EF-INEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGP--KLV-FGAEGQ-EE---NSTSI 123 (430)
T ss_dssp GGSEEESTTTGGGGTE--EE-ECSCEEEEETTTT--EEEETTCCEEECSEEEECCCC--EEE-CCSBTH-HH---HSCCC
T ss_pred HHhhhcHHHHHHHCCc--EE-EEeEEEEEECCCC--EEEECCCCEEECCEEEEeCCC--Ccc-CCccCc-cc---CcCCc
Confidence 0000011122333444 23 3558889887544 688889989999999999998 443 457770 00 11111
Q ss_pred CCCC----------C-CCCCeEEEEcCCC------CHHHHHHHHh----ccC----CcEEEEEecCceeecccCCCCChh
Q psy2398 166 KSPD----------Q-IRNKRVLVVGAGN------SGCDIAVDAS----HHS----EKVYHSTRRGYHYYPKFIDGKPTP 220 (433)
Q Consensus 166 ~~~~----------~-~~~~~v~VvG~G~------sg~d~a~~l~----~~~----~~V~~~~r~~~~~~p~~~~~~~~~ 220 (433)
++.+ + ..++.++|+|+|. .+.|++..+. +.+ .+|+++...+. ++.+....
T Consensus 124 ~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~--l~~~~~~~--- 198 (430)
T 3hyw_A 124 CTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPY--LGHFGVGG--- 198 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSS--TTCTTTTC---
T ss_pred ccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccch--hhhccchh---
Confidence 1111 1 1244566666653 1234444333 222 35676665442 11110000
Q ss_pred HHhHhhchhhcCchHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeCCeEEec
Q psy2398 221 QWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNGNIVHFV 300 (433)
Q Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~ 300 (433)
+.... ...+..+ ...++ ++.....|++++.+.+.+.
T Consensus 199 ------~~~~~------~~l~~~l-------~~~GV-------------------------~~~~~~~v~~v~~~~~~~~ 234 (430)
T 3hyw_A 199 ------IGASK------RLVEDLF-------AERNI-------------------------DWIANVAVKAIEPDKVIYE 234 (430)
T ss_dssp ------STTHH------HHHHHHH-------HHTTC-------------------------EEECSCEEEEECSSEEEEE
T ss_pred ------hHHHH------HHHHHHH-------HhCCe-------------------------EEEeCceEEEEeCCceEEE
Confidence 00000 1111111 01111 3344567888888888776
Q ss_pred C--C--ceeeccEEEEccCCCCCCCCCCccc--ccccC-CccccccccccCCCCcEEEEccccccC------------Ch
Q psy2398 301 D--D--THIEVDTIIYATGYNRHFPFIDKEK--LEWKL-GIPDLFIHIAPRNLDNIFFFGFVNAAA------------GL 361 (433)
Q Consensus 301 d--G--~~~~~D~vi~atG~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~~~~p~i~~iG~~~~~~------------~~ 361 (433)
+ | .++++|.+|+++|.+++ +++.... +..+. +.+.++..+..+++||||++|||+..+ ..
T Consensus 235 ~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~ 313 (430)
T 3hyw_A 235 DLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKT 313 (430)
T ss_dssp CTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCC
T ss_pred eeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchH
Confidence 4 3 46899999999999997 5544332 22233 345666666669999999999998532 34
Q ss_pred hhHHHHHHHHHHHHHhhhh
Q psy2398 362 GDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 362 ~~~a~~qa~~~a~~i~g~~ 380 (433)
.+.|..||+.+|++|....
T Consensus 314 a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 314 GMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5689999999999997554
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.65 E-value=8.7e-17 Score=153.60 Aligned_cols=136 Identities=15% Similarity=0.232 Sum_probs=91.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc--------CCCCCCccccceEe-ecCCCccc----CC--
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN--------SQASCGRVYPSLHL-ISPKFNTQ----VP-- 71 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~--------~~~~~~~~~~~~~~-~~~~~~~~----~~-- 71 (433)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.|. ..+. .+.+...+ ..+..... |.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNL--EVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEES--SCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCC--ccCHHHhccCCHHHHHHHHHhCCHH
Confidence 48999999999999999999999999999999987754332 1110 00100000 00000000 00
Q ss_pred ---------CCCC--CCCCCCCC--CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe----CCeEEEEEccCcEEEeC
Q psy2398 72 ---------DYPM--PDNYPVYP--NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY----EDIWEVELSNGKKKKYD 134 (433)
Q Consensus 72 ---------~~~~--~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~----~~~~~v~~~~g~~~~~d 134 (433)
..+. ..+...|+ ...++.+++.+.+++.++ +++++++|+.+..+ ++.|.|++.++ ++.+|
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 0000 00111122 567888899998988888 69999999999876 56788988776 79999
Q ss_pred EEEEccCCCCCCC
Q psy2398 135 FIAVCNGAQRVAR 147 (433)
Q Consensus 135 ~vIvAtG~~s~p~ 147 (433)
.||+|||.++.|.
T Consensus 159 ~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 159 NLIVATGGLSMPG 171 (401)
T ss_dssp EEEECCCCSSCGG
T ss_pred EEEECCCCccCCC
Confidence 9999999987554
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.62 E-value=6e-15 Score=130.28 Aligned_cols=124 Identities=14% Similarity=0.062 Sum_probs=84.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
.+||+|||||++|+.+|..|++.|.+|+++|+.....|.+... ..... ........+.+ ..-+.+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~-----~~~~~--~~~~~~~~~~d-------~~g~~~~ 68 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLP-----PKPPF--PPGSLLERAYD-------PKDERVW 68 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC-----CCSCC--CTTCHHHHHCC-------TTCCCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCc-----ccccc--chhhHHhhhcc-------CCCCCHH
Confidence 4899999999999999999999999999999984433332211 00000 00000001110 0112567
Q ss_pred HHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 87 MMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 87 ~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
.+.+++.+.+++. ++ .++ +++|+++..+++. +.|.+.+|.++.+|.||+|||.++...
T Consensus 69 ~~~~~l~~~~~~~~gv--~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 69 AFHARAKYLLEGLRPL--HLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHHHHHHTCTTE--EEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred HHHHHHHHHHHcCCCc--EEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 8889999888886 76 355 6789999887655 467888887899999999999965443
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.60 E-value=4.1e-18 Score=158.86 Aligned_cols=148 Identities=8% Similarity=0.046 Sum_probs=99.4
Q ss_pred CCcEEEECCChHHHHHHHHHHh--cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSE--GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~--~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+||||||+||+||.+|++ .|++|+|||+.+.+||.+.+... ..+...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~~~~~l~---------------------- 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMR---------------------- 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TCCCEEEE----------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cCCHHHHH----------------------
Confidence 4799999999999999999975 59999999999999997765411 11111100
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCCCCC--CCCCceecc
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPNYSG--YFSGEILHS 162 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~i~g--~~~g~~~~~ 162 (433)
+.+..+.+++++. +..+. ......+.++++++. .++.+.++| .+.+.....
T Consensus 120 -----~~~~~~~~e~Gv~--~~~~~------------------~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 172 (326)
T 3fpz_A 120 -----KPAHLFLQELEIP--YEDEG------------------DYVVVKHAALFISTV--LSKVLQLPNVKLFNATCVED 172 (326)
T ss_dssp -----TTTHHHHHHTTCC--CEECS------------------SEEEESCHHHHHHHH--HHHHHTSTTEEEETTEEEEE
T ss_pred -----HHHHHHHHHcCCE--EEECC------------------cceecceeEEEEcch--hhhccccccceeecccccce
Confidence 1112334556652 33221 122344455666665 666777777 444443333
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 163 MDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 163 ~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
...+....+.+++++|+|+|.+++|.|..+...+.++++..+..
T Consensus 173 ~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 173 LVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp EEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred eeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 33444456678999999999999999999999999999887654
No 97
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.56 E-value=7.3e-15 Score=124.43 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=101.1
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccC--CCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFI--DGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGV 252 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (433)
+|+|||+|.+|+++|..|++.+.+|+++.+++... ++.. ...+ .+|..... . .+.+.+.+.+.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~-~~~~~~~~~~------~~~~~~~~-~---~~~~~l~~~~~---- 67 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV-KGVSRVPNYP------GLLDEPSG-E---ELLRRLEAHAR---- 67 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT-TTCSCCCCST------TCTTCCCH-H---HHHHHHHHHHH----
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc-cCchhhhccC------CCcCCCCH-H---HHHHHHHHHHH----
Confidence 69999999999999999999999999999886321 1100 0000 00000000 0 11111111111
Q ss_pred cCCCCCCCCCCCCCCCccChhhhhcccCCCeeecCCceeeeC----CeEEecCCceeeccEEEEccCCCCCCCCCCcccc
Q psy2398 253 DYGLKKPDHPLDAAHPIMNSQILYHIGHGDILPKDDIKNLNG----NIVHFVDDTHIEVDTIIYATGYNRHFPFIDKEKL 328 (433)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~~v~~~dG~~~~~D~vi~atG~~~~~~~l~~~~~ 328 (433)
..++ ++... .+++++. ..+.+++| ++++|.||+|||.+|++ ++...+
T Consensus 68 ~~gv-------------------------~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~g~ 118 (180)
T 2ywl_A 68 RYGA-------------------------EVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL--PSLLGL 118 (180)
T ss_dssp HTTC-------------------------EEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH--HHHHTC
T ss_pred HcCC-------------------------EEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc--cccCCC
Confidence 0111 23334 5555532 24667788 89999999999999853 222233
Q ss_pred cccCCccccccccccCCCCcEEEEccccccCC-hhhHHHHHHHHHHHHHhhhh
Q psy2398 329 EWKLGIPDLFIHIAPRNLDNIFFFGFVNAAAG-LGDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~p~i~~iG~~~~~~~-~~~~a~~qa~~~a~~i~g~~ 380 (433)
..+.+.+.+++ .+.++.|+||++||++.... .+..|..||+.+|.++.+..
T Consensus 119 ~~~~g~i~vd~-~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 119 TRRGAYIDTDE-GGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp CEETTEECCCT-TCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCceEEeCC-CCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHh
Confidence 33434444544 45778999999999998654 77889999999999998764
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.49 E-value=6.2e-14 Score=134.28 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=93.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCC------cc-ccceEeecCCCcc----cCC--
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCG------RV-YPSLHLISPKFNT----QVP-- 71 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~------~~-~~~~~~~~~~~~~----~~~-- 71 (433)
+..+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.+....... .. ........+.... .|.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 4568999999999999999999999999999999998765442110000 00 0000000010000 000
Q ss_pred ---------CCCC--CCCCCC--CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEE
Q psy2398 72 ---------DYPM--PDNYPV--YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAV 138 (433)
Q Consensus 72 ---------~~~~--~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIv 138 (433)
..+. ...... .....++.+.+.+.+++.++ .++++++|+.+..+++.|.|++.++ ++.+|.||+
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVERTASGFRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEEETTEEEEEETTE-EEEESEEEE
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEE
Confidence 0000 000001 12457888899998988888 6999999999998888899999887 799999999
Q ss_pred ccCCCCCCCC
Q psy2398 139 CNGAQRVARY 148 (433)
Q Consensus 139 AtG~~s~p~~ 148 (433)
|||.++.|..
T Consensus 182 AtG~~S~p~~ 191 (417)
T 3v76_A 182 ASGGKSIPKM 191 (417)
T ss_dssp CCCCSSCGGG
T ss_pred CCCCccCCCC
Confidence 9999886554
No 99
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.47 E-value=9.7e-14 Score=135.49 Aligned_cols=195 Identities=12% Similarity=0.090 Sum_probs=103.8
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC--------CCCCccccceE--------e-----------
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ--------ASCGRVYPSLH--------L----------- 61 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~--------~~~~~~~~~~~--------~----------- 61 (433)
||+|||||++|+++|..|++.|.+|+|+||. ..||.-... .+.......+. +
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 555532111 00000000000 0
Q ss_pred ecCC---Cc----ccCCC-CC-CC-CCCC-----CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeE-EEEE
Q psy2398 62 ISPK---FN----TQVPD-YP-MP-DNYP-----VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIW-EVEL 125 (433)
Q Consensus 62 ~~~~---~~----~~~~~-~~-~~-~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~-~v~~ 125 (433)
..+. .+ ..|.. .. .+ ...+ .-.....+.+.+.+.+++.++ .++.+++| .+..+++.. -+..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv--~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGI--PIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTC--CEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCC--EEEECcEE-EEEEeCCEEEEEEE
Confidence 0000 00 00100 00 00 0000 011245677777777777787 58899999 998776543 2333
Q ss_pred c-cCcEEEeCEEEEccCCCCCCCCCCCCC---CCCCceeccC-----CCCCCCCCCC-CeEEEEcCCCCHHHHHHHHhcc
Q psy2398 126 S-NGKKKKYDFIAVCNGAQRVARYPNYSG---YFSGEILHSM-----DYKSPDQIRN-KRVLVVGAGNSGCDIAVDASHH 195 (433)
Q Consensus 126 ~-~g~~~~~d~vIvAtG~~s~p~~p~i~g---~~~g~~~~~~-----~~~~~~~~~~-~~v~VvG~G~sg~d~a~~l~~~ 195 (433)
. ++..+.+|.||+|||.++ ..+++.. ..+|.-+... ...+.+.+.. ..++++|+| +++++..+...
T Consensus 157 ~~~~g~~~a~~VVlAtGg~~--~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~ 232 (472)
T 2e5v_A 157 EKRGLVEDVDKLVLATGGYS--YLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGE 232 (472)
T ss_dssp TTTEEECCCSEEEECCCCCG--GGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHT
T ss_pred EeCCCeEEeeeEEECCCCCc--ccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCC
Confidence 2 222477999999999954 3333321 2233211100 1112221111 234556766 88888777777
Q ss_pred CCcEEEEEecCceeeccc
Q psy2398 196 SEKVYHSTRRGYHYYPKF 213 (433)
Q Consensus 196 ~~~V~~~~r~~~~~~p~~ 213 (433)
|..+ +..+ +..+++++
T Consensus 233 G~~~-v~~~-g~rf~~~~ 248 (472)
T 2e5v_A 233 GAQI-INEN-GERFLFNY 248 (472)
T ss_dssp TCEE-EETT-CCCGGGGT
T ss_pred ceEE-ECCC-CCCCCccC
Confidence 7766 4433 33345543
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.42 E-value=2.3e-12 Score=108.94 Aligned_cols=109 Identities=17% Similarity=0.266 Sum_probs=84.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
++||+|||||++|+.+|..|++.|.+|+++|+.+.. +... ..+..++.+ +......
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~~---------------~~~~~~~~~------~~~~~~~ 56 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKGV---------------SRVPNYPGL------LDEPSGE 56 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTTC---------------SCCCCSTTC------TTCCCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccCc---------------hhhhccCCC------cCCCCHH
Confidence 369999999999999999999999999999997632 1110 001111111 1124578
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~ 143 (433)
++.+++.+.+++.++ +++++ +|+.++.+++.+.+++.++ ++.+|.||+|+|..
T Consensus 57 ~~~~~l~~~~~~~gv--~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 57 ELLRRLEAHARRYGA--EVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHTTC--EEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHcCC--EEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 899999999999998 58888 9999998777789998888 79999999999984
No 101
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.38 E-value=3.2e-12 Score=122.29 Aligned_cols=136 Identities=10% Similarity=0.114 Sum_probs=91.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCC-------------C----CccccceEeecCCCc--
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQAS-------------C----GRVYPSLHLISPKFN-- 67 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~-------------~----~~~~~~~~~~~~~~~-- 67 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+..|+....... . ...+.......+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 479999999999999999999999999999998876653322210 0 000111111111111
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEc---cCcEEEeCEEEEccCCC
Q psy2398 68 TQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELS---NGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~---~g~~~~~d~vIvAtG~~ 143 (433)
..+..............+..+.+++.+.+.+.|+ .++++++|+.+..+++.+. |++. ++.++.+|.||.|+|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 1111110001111234678899999999988887 5899999999998888777 7763 44579999999999997
Q ss_pred C
Q psy2398 144 R 144 (433)
Q Consensus 144 s 144 (433)
|
T Consensus 162 s 162 (397)
T 3cgv_A 162 S 162 (397)
T ss_dssp C
T ss_pred h
Confidence 6
No 102
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.37 E-value=7.3e-13 Score=127.25 Aligned_cols=137 Identities=18% Similarity=0.234 Sum_probs=90.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCc---ccCCCC----------------CCccccceEeecCC-
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGV---WNSQAS----------------CGRVYPSLHLISPK- 65 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~---~~~~~~----------------~~~~~~~~~~~~~~- 65 (433)
+.+||+|||||++|+++|..|++.|++|+|||+.+..+.. +..... .........+....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4589999999999999999999999999999998764210 000000 00011111111111
Q ss_pred --CcccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEcc
Q psy2398 66 --FNTQVPDYPMP---DNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCN 140 (433)
Q Consensus 66 --~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAt 140 (433)
....++..... ........+..+.+.+.+.+.. . .++++++|+.++.+++.++|++.+|+++.+|.||.|+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECC
Confidence 11111100000 0111234578888888888766 3 6899999999999989999999999899999999999
Q ss_pred CCCCCC
Q psy2398 141 GAQRVA 146 (433)
Q Consensus 141 G~~s~p 146 (433)
|.+|.-
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 997643
No 103
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.35 E-value=1.5e-12 Score=121.95 Aligned_cols=131 Identities=18% Similarity=0.266 Sum_probs=87.5
Q ss_pred CcEEEECCChHHHHHHHHHHh---cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCC------------------
Q psy2398 8 IKLCIIGGGPLGIGLGRELSE---GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKF------------------ 66 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~---~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~------------------ 66 (433)
+||+|||||++|+++|..|++ .|++|+||||.+.+||.+...... .+..........
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~--~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSP--HNPQCTADLGAQYITCTPHYAKKHQRFYDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECS--SCTTCEEESSCCCEEECSSHHHHTHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecC--CCCCceEecCCceEEcCchHHHHHHHHHHH
Confidence 699999999999999999999 899999999999999877643110 000011110000
Q ss_pred ------cccCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEE
Q psy2398 67 ------NTQVPD----YPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFI 136 (433)
Q Consensus 67 ------~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~v 136 (433)
...+.. .........+.....+..+++.+++..+. .++++++|++|+.++++|+|++.+|..+.||.|
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~v 157 (342)
T 3qj4_A 80 LLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLI 157 (342)
T ss_dssp HHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEECSSSEEEEESSSCCEEESEE
T ss_pred HHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEE
Confidence 000000 00000111122233345566666666666 699999999999988889999988877899999
Q ss_pred EEccCC
Q psy2398 137 AVCNGA 142 (433)
Q Consensus 137 IvAtG~ 142 (433)
|+|+..
T Consensus 158 V~A~p~ 163 (342)
T 3qj4_A 158 VLTMPV 163 (342)
T ss_dssp EECSCH
T ss_pred EECCCH
Confidence 999985
No 104
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.35 E-value=3.2e-12 Score=127.40 Aligned_cols=137 Identities=18% Similarity=0.195 Sum_probs=89.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCC--C-------CCccccceE-----ee---cCCC---
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQA--S-------CGRVYPSLH-----LI---SPKF--- 66 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~--~-------~~~~~~~~~-----~~---~~~~--- 66 (433)
.+||+|||||++|+++|..|++.|++|+|||+.+..+....... + .-.++..+. .. ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 47999999999999999999999999999999876431100000 0 000000000 00 0000
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE--ccC-cEEEeCEEEEccCCC
Q psy2398 67 NTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL--SNG-KKKKYDFIAVCNGAQ 143 (433)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~--~~g-~~~~~d~vIvAtG~~ 143 (433)
...+.....+........+..+.+.+.+.+++.++ .++++++|+.++.+++.++|++ .+| .++++|+||.|+|.+
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 11111111111112346788999999999888777 5889999999998888888887 567 679999999999998
Q ss_pred CC
Q psy2398 144 RV 145 (433)
Q Consensus 144 s~ 145 (433)
|.
T Consensus 207 S~ 208 (570)
T 3fmw_A 207 ST 208 (570)
T ss_dssp CH
T ss_pred ch
Confidence 73
No 105
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.35 E-value=4e-12 Score=121.67 Aligned_cols=137 Identities=20% Similarity=0.348 Sum_probs=87.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC-----CCcccCCCCCC-------ccccce---------EeecC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL-----GGVWNSQASCG-------RVYPSL---------HLISP 64 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~-----Gg~~~~~~~~~-------~~~~~~---------~~~~~ 64 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.. |+.|......+ .+++.+ .+...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 4579999999999999999999999999999998653 33333221100 000000 11111
Q ss_pred CCcccCCCC-CCC-CCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCC
Q psy2398 65 KFNTQVPDY-PMP-DNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGA 142 (433)
Q Consensus 65 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~ 142 (433)
.....+... +.. ........+..+.+++.+.+.. . .++++++|+.++.+++.|+|++.+|.++.+|.||.|+|.
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 000000000 000 0011134577777777665432 2 589999999999887789999999888999999999999
Q ss_pred CCCC
Q psy2398 143 QRVA 146 (433)
Q Consensus 143 ~s~p 146 (433)
+|..
T Consensus 181 ~S~v 184 (398)
T 2xdo_A 181 MSKV 184 (398)
T ss_dssp TCSC
T ss_pred chhH
Confidence 7743
No 106
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.35 E-value=8.2e-12 Score=120.42 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=89.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC----CCCcccCCCC--------------CC-ccccceEeecCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD----LGGVWNSQAS--------------CG-RVYPSLHLISPKF 66 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~----~Gg~~~~~~~--------------~~-~~~~~~~~~~~~~ 66 (433)
..+||+|||||++|+++|..|++.|++|+|+|+.+. .|........ .. .............
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 348999999999999999999999999999999863 2322211100 00 0000111111111
Q ss_pred cc--cCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE--EEEccCc--EEEeCEEEEc
Q psy2398 67 NT--QVPDYPMP-DNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE--VELSNGK--KKKYDFIAVC 139 (433)
Q Consensus 67 ~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~--v~~~~g~--~~~~d~vIvA 139 (433)
.. .+...... ........+..+.+.+.+.+.+.|+ .++++++|+.++.+++.+. +.+.+|+ ++.+|.||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 11 11111000 1111245688999999999988888 6999999999998876654 4456776 6999999999
Q ss_pred cCCCC
Q psy2398 140 NGAQR 144 (433)
Q Consensus 140 tG~~s 144 (433)
+|.++
T Consensus 162 ~G~~s 166 (421)
T 3nix_A 162 SGYGR 166 (421)
T ss_dssp CGGGC
T ss_pred CCCch
Confidence 99865
No 107
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.34 E-value=7.5e-12 Score=123.04 Aligned_cols=140 Identities=14% Similarity=0.174 Sum_probs=92.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC--CC-------CCccccceEeecCCCc-------
Q psy2398 4 KNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ--AS-------CGRVYPSLHLISPKFN------- 67 (433)
Q Consensus 4 ~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~--~~-------~~~~~~~~~~~~~~~~------- 67 (433)
+++.+||+||||||+|+++|..|++.|++|+|||+.+..+..-.-. .+ .-.++..+....+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 3456899999999999999999999999999999987653210000 00 0001110000000000
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc---EEEeCEEEEccCCCC
Q psy2398 68 TQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK---KKKYDFIAVCNGAQR 144 (433)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~---~~~~d~vIvAtG~~s 144 (433)
..+.....+.......++..+.+.+.+.+.+.++ .++++++|+.++.+++.+++++.++. ++++|+||.|+|.+|
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0010000000011234578899999999988887 69999999999998888999887764 789999999999987
Q ss_pred C
Q psy2398 145 V 145 (433)
Q Consensus 145 ~ 145 (433)
.
T Consensus 166 ~ 166 (500)
T 2qa1_A 166 S 166 (500)
T ss_dssp H
T ss_pred H
Confidence 4
No 108
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.32 E-value=8.3e-12 Score=122.69 Aligned_cols=139 Identities=15% Similarity=0.148 Sum_probs=91.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC--CC-------CCccccceE----ee---cCCCcc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ--AS-------CGRVYPSLH----LI---SPKFNT 68 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~--~~-------~~~~~~~~~----~~---~~~~~~ 68 (433)
+..+||+||||||+|+++|..|++.|++|+|||+.+..+..-.-. .+ .-.++..+. .. ......
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 456899999999999999999999999999999987653210000 00 000000000 00 000000
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc---EEEeCEEEEccCCCCC
Q psy2398 69 QVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK---KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~---~~~~d~vIvAtG~~s~ 145 (433)
.+.....+.......++..+.+.+.+.+.+.++ .++++++|+.++.+++.+++++.++. ++++|+||.|+|.+|.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 111110000011234578899999999988887 69999999999988788899888764 7899999999999874
No 109
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.31 E-value=2.7e-11 Score=120.42 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=92.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCC--C-----------------CCccccc---e---
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQA--S-----------------CGRVYPS---L--- 59 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~--~-----------------~~~~~~~---~--- 59 (433)
...+||+|||||++|+++|..|+++|++|+|||+.+..+..-.... + ....+.. .
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 3568999999999999999999999999999999875431100000 0 0000000 0
Q ss_pred Eeec--CCCcc----cCCC----CCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC----eEEEE
Q psy2398 60 HLIS--PKFNT----QVPD----YPM-PDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED----IWEVE 124 (433)
Q Consensus 60 ~~~~--~~~~~----~~~~----~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~----~~~v~ 124 (433)
.... ...+. .+.. ... ........++..+.+++.+.+++.++ .++++++|+.++.+++ .++++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~~~~~~~v~v~ 160 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQHDDDAGAGVTAR 160 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEECGGGCSEEEEE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEECCCCccccEEEE
Confidence 0000 00000 0000 000 00112345788999999999998887 6999999999999877 89998
Q ss_pred EccC---cEEEeCEEEEccCCCC
Q psy2398 125 LSNG---KKKKYDFIAVCNGAQR 144 (433)
Q Consensus 125 ~~~g---~~~~~d~vIvAtG~~s 144 (433)
+.++ .++.+|+||.|+|.+|
T Consensus 161 ~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 161 LAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEETTEEEEEEEEEEEECCCTTC
T ss_pred EEcCCCeEEEEeCEEEECCCCcc
Confidence 8876 6799999999999987
No 110
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.30 E-value=5e-12 Score=120.97 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=85.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC----CCcccCCCC-------C-------CccccceEeecC--C
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL----GGVWNSQAS-------C-------GRVYPSLHLISP--K 65 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~----Gg~~~~~~~-------~-------~~~~~~~~~~~~--~ 65 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.. |+.+..... . ............ .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 4589999999999999999999999999999998653 111111000 0 000000001000 0
Q ss_pred CcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 66 FNTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
.... ..+.+ .....+..+.+++.+.+ .++ .++++++|+.++.+++.++|++.+|.++.+|.||.|+|.+|.
T Consensus 84 ~~~~--~~~~~---~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 84 ERVG--SVPAD---WRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CEEE--EEECC---CCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred Cccc--cccCc---ccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 0000 00000 01234567777776654 244 689999999999888889999999888999999999999774
No 111
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.30 E-value=5.7e-12 Score=125.00 Aligned_cols=174 Identities=14% Similarity=0.075 Sum_probs=103.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC-CCCCcccCCCCCCcc-----ccceEeecCCCc--------ccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES-DLGGVWNSQASCGRV-----YPSLHLISPKFN--------TQVP 71 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~-~~Gg~~~~~~~~~~~-----~~~~~~~~~~~~--------~~~~ 71 (433)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|...... ..+.. ...+. .....+ ..|.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnp-s~ggia~~~lv~ei~-algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNP-AIGGIGKGHLVKEVD-ALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSS-EEESTTHHHHHHHHH-HTTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccc-cccchhhHHHHHHHH-HhccHHHHHhhhcccchh
Confidence 45899999999999999999999999999999974 344211100 00000 00000 000000 0000
Q ss_pred CC---CCCCCC--CCCCCHHHHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCC
Q psy2398 72 DY---PMPDNY--PVYPNHSMMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 72 ~~---~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
.. ..+... .....+..+.+.+.+.+++ .++ .+ ++++|+.+..+++. +.|.+.+|..+.||.||+|||.++
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 00 000000 0113456788888888887 466 35 67799999876544 568888888899999999999954
Q ss_pred CCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEe
Q psy2398 145 VARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTR 204 (433)
Q Consensus 145 ~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r 204 (433)
..+.++|... +...+ +| |.+|.+++..|.+.|.+|+.+..
T Consensus 182 --~~~~i~G~~~--------------~~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 182 --DGKIHIGLDN--------------YSGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp --CCEEECC-------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred --cCccccCccc--------------CCCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 4444555100 01223 56 88899999999999999998864
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.30 E-value=4.7e-12 Score=120.34 Aligned_cols=131 Identities=17% Similarity=0.157 Sum_probs=87.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC---C----------------CCCccccceEeecCC-C
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ---A----------------SCGRVYPSLHLISPK-F 66 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~---~----------------~~~~~~~~~~~~~~~-~ 66 (433)
.+||+|||||++|+++|..|++.|++|+|||+.+..++.-... . ............... .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4799999999999999999999999999999987664310000 0 000001111111110 0
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 67 NTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
+..++ .+........+..+.+++.+.+.+.++ .++++++|+.++. ++ .|++.+|.++.+|.||+|+|.+|.
T Consensus 91 ~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKET---FNGLPWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEEC---GGGCCEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeecc---CCCCceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccHH
Confidence 00010 000001234678899999999988887 6999999999987 44 888888888999999999999663
No 113
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.30 E-value=1.9e-11 Score=120.78 Aligned_cols=143 Identities=18% Similarity=0.129 Sum_probs=89.0
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC----CCCcccCCC-C--------------CCcccc-ceE
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD----LGGVWNSQA-S--------------CGRVYP-SLH 60 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~----~Gg~~~~~~-~--------------~~~~~~-~~~ 60 (433)
|+|....+||+|||||++|+++|..|++.|++|+|||+.+. .|..+.... . ...... ...
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 55555568999999999999999999999999999999863 222211100 0 000000 000
Q ss_pred eecCCC----cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe---EEEEEccCc--E
Q psy2398 61 LISPKF----NTQVPDYPMP-DNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI---WEVELSNGK--K 130 (433)
Q Consensus 61 ~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~---~~v~~~~g~--~ 130 (433)
...... ...+...+.. ........+..+.+++.+.+.+.++ +++++++|+.+..+++. +.+...+|+ +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~ 158 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLFEGERAVGVRYRNTEGVELM 158 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEETTEEEEEEEECSSSCEEE
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEECCEEEEEEEEeCCCCEEE
Confidence 000000 0011111100 1111235688999999999988887 68999999999988664 444455564 7
Q ss_pred EEeCEEEEccCCCCC
Q psy2398 131 KKYDFIAVCNGAQRV 145 (433)
Q Consensus 131 ~~~d~vIvAtG~~s~ 145 (433)
+.+|.||+|+|.+|.
T Consensus 159 i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 159 AHARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEEEECCCTTCS
T ss_pred EEcCEEEECCCcchH
Confidence 899999999999763
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.29 E-value=3.9e-12 Score=121.78 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=91.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCC---CcccCCCC----------------CCccccceEeecCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLG---GVWNSQAS----------------CGRVYPSLHLISPK 65 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~G---g~~~~~~~----------------~~~~~~~~~~~~~~ 65 (433)
..++||+|||||++|+++|..|++.|++|+|+|+.+... ........ ..............
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 345899999999999999999999999999999986541 10000000 00001111111100
Q ss_pred --CcccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCeE--EEEEccCcEEEeCEEEEc
Q psy2398 66 --FNTQVPDYPMP-DNYPVYPNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDIW--EVELSNGKKKKYDFIAVC 139 (433)
Q Consensus 66 --~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~--~v~~~~g~~~~~d~vIvA 139 (433)
....++..... ........+..+.+.+.+.+.+. ++ +++++++|+.++.+++.+ .|++.+|+++.+|.||+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~A 161 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGA 161 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEEC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEEC
Confidence 01111110000 00112356888999999888877 66 589999999999887778 899988888999999999
Q ss_pred cCCCCC
Q psy2398 140 NGAQRV 145 (433)
Q Consensus 140 tG~~s~ 145 (433)
+|.+|.
T Consensus 162 dG~~s~ 167 (399)
T 2x3n_A 162 DGIASY 167 (399)
T ss_dssp CCTTCH
T ss_pred CCCChH
Confidence 999764
No 115
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.29 E-value=3.9e-11 Score=111.92 Aligned_cols=136 Identities=16% Similarity=0.277 Sum_probs=84.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCC-------cccc----------------ceEeecC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCG-------RVYP----------------SLHLISP 64 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~-------~~~~----------------~~~~~~~ 64 (433)
+||+|||||++|+++|..|++.|++|+|||+.+..||.+....... ..+. .......
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 7999999999999999999999999999999998888665421000 0000 0000000
Q ss_pred CCcccCCCC---CCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEE-eCEEEEcc
Q psy2398 65 KFNTQVPDY---PMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKK-YDFIAVCN 140 (433)
Q Consensus 65 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~-~d~vIvAt 140 (433)
.....+... ........+.....+....+.+++ ++ .++++++|+.++.++++|+|++.+|.... +|+||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECS
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcC
Confidence 000000000 000011111111222333333333 56 58999999999998888999999887664 99999999
Q ss_pred CCCCCCC
Q psy2398 141 GAQRVAR 147 (433)
Q Consensus 141 G~~s~p~ 147 (433)
|..+..+
T Consensus 159 g~~~~~~ 165 (336)
T 1yvv_A 159 PAPQAST 165 (336)
T ss_dssp CHHHHGG
T ss_pred CHHHHHH
Confidence 9865444
No 116
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=1e-11 Score=120.56 Aligned_cols=139 Identities=19% Similarity=0.231 Sum_probs=90.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCC------CCccccceEee---cCCC----cccCC--
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQAS------CGRVYPSLHLI---SPKF----NTQVP-- 71 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~------~~~~~~~~~~~---~~~~----~~~~~-- 71 (433)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+....... ....+..+... .+.. +..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 479999999999999999999999999999998877643211000 00000000000 0000 00000
Q ss_pred ---------CCCC-----CCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEE
Q psy2398 72 ---------DYPM-----PDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFI 136 (433)
Q Consensus 72 ---------~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~v 136 (433)
..+. ...++.......+.+.+.+.+++.++ +++++++|+.+..+++. |.|++.+|.++.+|.|
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~V 183 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEYENGQTKAVILQTGEVLETNHV 183 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEETTEEEEEEETTCCEEECSCE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEecCCcEEEEEECCCCEEECCEE
Confidence 0000 00001111357788888888888888 68999999999987666 8899988877999999
Q ss_pred EEccCCCCCCC
Q psy2398 137 AVCNGAQRVAR 147 (433)
Q Consensus 137 IvAtG~~s~p~ 147 (433)
|+|||.++.|.
T Consensus 184 VlAtGg~s~~~ 194 (447)
T 2i0z_A 184 VIAVGGKSVPQ 194 (447)
T ss_dssp EECCCCSSSGG
T ss_pred EECCCCCcCCC
Confidence 99999987543
No 117
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.28 E-value=2.7e-11 Score=117.48 Aligned_cols=63 Identities=17% Similarity=0.111 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCc---EEEEEEEeCCeEE-EEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNT---EVINLEQYEDIWE-VELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~---~V~~v~~~~~~~~-v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
...+.+.+.+.+++.|+ ++++++ +|+++..+++.+. |++.+|.++.||.||+|+|.++....+
T Consensus 160 ~~~~~~~L~~~a~~~Gv--~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGV--KFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC
T ss_pred HHHHHHHHHHHHHhcCC--EEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC
Confidence 46788888888888888 699999 9999998888888 999988789999999999998654333
No 118
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.27 E-value=2.9e-11 Score=115.36 Aligned_cols=137 Identities=10% Similarity=0.112 Sum_probs=87.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCC------------C--C---CccccceEeecCCCccc
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQA------------S--C---GRVYPSLHLISPKFNTQ 69 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~------------~--~---~~~~~~~~~~~~~~~~~ 69 (433)
.|||+||||||+|+++|..|+++|++|+||||++.+|....... + . ...........+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 48999999999999999999999999999999877653211000 0 0 00011222222211110
Q ss_pred --CCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE--ccC--cEEEeCEEEEccCCC
Q psy2398 70 --VPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL--SNG--KKKKYDFIAVCNGAQ 143 (433)
Q Consensus 70 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~--~~g--~~~~~d~vIvAtG~~ 143 (433)
+..............+..+.+.+.+.+...|+ .++++++|+.+..+++...... .++ .++++|.||.|+|.+
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 00000001111234688999999999988887 5899999999988766544322 223 358899999999997
Q ss_pred CC
Q psy2398 144 RV 145 (433)
Q Consensus 144 s~ 145 (433)
|.
T Consensus 162 S~ 163 (397)
T 3oz2_A 162 SE 163 (397)
T ss_dssp CH
T ss_pred cH
Confidence 64
No 119
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.25 E-value=7e-12 Score=123.15 Aligned_cols=132 Identities=16% Similarity=0.162 Sum_probs=88.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccce-EeecCCCccc-CCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSL-HLISPKFNTQ-VPDYPMPDNYPVYP 83 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~ 83 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.+|+..... .++.. .......+.. ...+. .......
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~-----~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~ 163 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLH-----LWPFTIHDLRALGAKKFYGRFC--TGTLDHI 163 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEE-----CCHHHHHHHHTTTHHHHCTTTT--CTTCCEE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCccc-----CChhHHHHHHHcCCcccccccc--ccccccC
Confidence 45899999999999999999999999999999998776432111 01100 0000000000 00000 0001123
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe---CCeEEEEE--c-cC--cEEEeCEEEEccCCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY---EDIWEVEL--S-NG--KKKKYDFIAVCNGAQRVA 146 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~---~~~~~v~~--~-~g--~~~~~d~vIvAtG~~s~p 146 (433)
.+.++.+++.+.+++.++ .++++++|+.++.+ ++.|.|++ . +| .++.+|+||+|+|.+|.+
T Consensus 164 ~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 164 SIRQLQLLLLKVALLLGV--EIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp EHHHHHHHHHHHHHHTTC--EEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 468889999998888887 69999999999874 35688887 3 44 358999999999996644
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.23 E-value=7.6e-11 Score=116.05 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=86.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCC-------CcccCCCC-----------CCccccceEeecCCCc-
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLG-------GVWNSQAS-----------CGRVYPSLHLISPKFN- 67 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~G-------g~~~~~~~-----------~~~~~~~~~~~~~~~~- 67 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.|..... ....++.-.+......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 3799999999999999999999999999999987652 22322110 0000000000000000
Q ss_pred -c-------cCCCCCCCCC--CCC--C---CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC-eEEEEEccCcEE
Q psy2398 68 -T-------QVPDYPMPDN--YPV--Y---PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED-IWEVELSNGKKK 131 (433)
Q Consensus 68 -~-------~~~~~~~~~~--~~~--~---~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~-~~~v~~~~g~~~ 131 (433)
. .+..+..+.. ... . .....+.+.+.+.+++.++ .++++++|+.+..+++ .+.|++.+++++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~~~~~v~gV~l~~G~~i 264 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMEDGQITGVTLSNGEEI 264 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEESSSBEEEEEETTSCEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEeCCEEEEEEECCCCEE
Confidence 0 0000000000 000 1 1136677788888888887 6999999999998755 456888888889
Q ss_pred EeCEEEEccCCCC
Q psy2398 132 KYDFIAVCNGAQR 144 (433)
Q Consensus 132 ~~d~vIvAtG~~s 144 (433)
.+|.||+|+|.++
T Consensus 265 ~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 265 KSRHVVLAVGHSA 277 (549)
T ss_dssp ECSCEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999966
No 121
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.21 E-value=1.7e-10 Score=115.43 Aligned_cols=137 Identities=16% Similarity=0.239 Sum_probs=89.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhc------CCCeEEEccCCCCCCcccCCCC---C------------Ccccc------ce
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG------NINYDLYEMESDLGGVWNSQAS---C------------GRVYP------SL 59 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~------g~~v~v~e~~~~~Gg~~~~~~~---~------------~~~~~------~~ 59 (433)
.+||+|||||++|+++|..|++. |++|+||||.+.+|+....... . +.... .+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 37999999999999999999999 9999999999877654211110 0 00000 01
Q ss_pred EeecCCCcccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeE-EEEEcc------C
Q psy2398 60 HLISPKFNTQVPDYP---MPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIW-EVELSN------G 128 (433)
Q Consensus 60 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~-~v~~~~------g 128 (433)
.+........++..+ +.........+..+.++|.+.+++.++ .++++++|+.+..++ +.. .|++.+ |
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 111111111122111 111111235678999999999998887 599999999998864 333 366652 3
Q ss_pred ---------cEEEeCEEEEccCCCCC
Q psy2398 129 ---------KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 129 ---------~~~~~d~vIvAtG~~s~ 145 (433)
.++.+|+||+|+|.+|.
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCH
T ss_pred CcccccCCceEEECCEEEEeeCCCch
Confidence 57999999999999764
No 122
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.21 E-value=8.7e-11 Score=116.91 Aligned_cols=134 Identities=14% Similarity=0.182 Sum_probs=87.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCC--C-----------------CCcccc---c-eEeec
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQA--S-----------------CGRVYP---S-LHLIS 63 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~--~-----------------~~~~~~---~-~~~~~ 63 (433)
.+||+|||||++|+++|..|++.|++|+|||+.+..+....-.. + .+.... . .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 47999999999999999999999999999999876542211000 0 000000 0 11110
Q ss_pred --CCCcccCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc---C--
Q psy2398 64 --PKFNTQVPDYPM--------PDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN---G-- 128 (433)
Q Consensus 64 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g-- 128 (433)
...+..+..... ........++..+.+++.+.+.+. ++++++|+.++.+++.+++++.+ |
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRDDHVRATITDLRTGAT 180 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeCCEEEEEEEECCCCCE
Confidence 011111110000 000112345778888888888764 78999999999887888888765 5
Q ss_pred cEEEeCEEEEccCCCCC
Q psy2398 129 KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 129 ~~~~~d~vIvAtG~~s~ 145 (433)
.++.+|+||.|+|.+|.
T Consensus 181 ~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 181 RAVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEEECCCTTCH
T ss_pred EEEEeCEEEECCCCCcH
Confidence 46899999999999874
No 123
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.21 E-value=7.8e-11 Score=111.25 Aligned_cols=60 Identities=10% Similarity=0.127 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEccC--cEEEeCEEEEccCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSNG--KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g--~~~~~d~vIvAtG~~s~ 145 (433)
....+.+.+.+.+++.|+ +++++++|+++..++++ |.|++.+| .++.+|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGA--QLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 356788888888888888 68999999999987554 89998887 47999999999999763
No 124
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.20 E-value=3.2e-11 Score=117.41 Aligned_cols=134 Identities=16% Similarity=0.063 Sum_probs=87.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC--CCcccCCCC----------CCc-------cccceEeecCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL--GGVWNSQAS----------CGR-------VYPSLHLISPKF 66 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~--Gg~~~~~~~----------~~~-------~~~~~~~~~~~~ 66 (433)
..+||+|||||++|+++|..|++.|++|+|+|+.+.. |..+....- ... .+.......+..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 3589999999999999999999999999999998753 222111000 000 000011111110
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEc---cCc--EEEeCEEEEcc
Q psy2398 67 NTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELS---NGK--KKKYDFIAVCN 140 (433)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~---~g~--~~~~d~vIvAt 140 (433)
...+ +.+. ......+..+.+.+.+.+.+.++ .++++++|+.+..+++.+. |++. +|+ ++.+|.||+|+
T Consensus 85 ~~~~---~~~~-~~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 85 QTVW---TVNG-EGFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp SCEE---EEEE-EEEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred ceEE---eECC-CcEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 0000 0000 01234678899999998888887 6999999999998776654 5443 565 68999999999
Q ss_pred CCCCC
Q psy2398 141 GAQRV 145 (433)
Q Consensus 141 G~~s~ 145 (433)
|.+|.
T Consensus 159 G~~s~ 163 (453)
T 3atr_A 159 GYSRS 163 (453)
T ss_dssp GGGCT
T ss_pred CCchh
Confidence 99764
No 125
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.20 E-value=3.7e-11 Score=118.77 Aligned_cols=175 Identities=13% Similarity=0.129 Sum_probs=108.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC-CCCCcccCCCCCCc-----cccceEeecCCCc--------ccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES-DLGGVWNSQASCGR-----VYPSLHLISPKFN--------TQVP 71 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~-~~Gg~~~~~~~~~~-----~~~~~~~~~~~~~--------~~~~ 71 (433)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|+.-... ..+. ....+.. ....+ ..|.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnp-s~GGia~g~lv~elda-lgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNP-AIGGIAKGIVVREIDA-LGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCS-EEECTTHHHHHHHHHH-HTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccc-cccccchHHHHHHHHH-hhhHHHHHhhhccccee
Confidence 35899999999999999999999999999999974 454311000 0000 0000000 00000 0000
Q ss_pred CCC---CCC-CCC-CCCCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCC
Q psy2398 72 DYP---MPD-NYP-VYPNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 72 ~~~---~~~-~~~-~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
... -+. +.+ ....+..+.+.+.+.+++. ++ .+ ++++|+.+..+++. +.|.+.+|..+.+|.||+|||.+
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~- 179 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF- 179 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC-
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC-
Confidence 000 000 000 1224577888888888874 66 35 57899999876554 45888888889999999999994
Q ss_pred CCCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec
Q psy2398 145 VARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR 205 (433)
Q Consensus 145 ~p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~ 205 (433)
++.+.++|. .... ..+ + |+.++.+++..|.+.|.++..+.+.
T Consensus 180 -s~~~~~~G~----~~~~----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~tg 221 (637)
T 2zxi_A 180 -LNGVIYIGD----KMIP----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKTG 221 (637)
T ss_dssp -BTCEEEETT----EEEE----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEEE
T ss_pred -ccCceeccc----eecC----------CCC---C-CchhHHHHHHHHHhcCCceEEecCC
Confidence 444445551 1111 112 2 3678899999999999888877654
No 126
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.19 E-value=2.8e-10 Score=103.45 Aligned_cols=130 Identities=13% Similarity=0.227 Sum_probs=80.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCCCCCCc-ccCCCCCCccccceEeecCC--CcccCCCCCCCCCCCC-
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMESDLGGV-WNSQASCGRVYPSLHLISPK--FNTQVPDYPMPDNYPV- 81 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~~~Gg~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~- 81 (433)
.+||+|||||++|+++|..|++. |++|+|+|+.+.+||. |... ..+..+...... .+..+ ..++......
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~----~~~~~~~~~~~~~~~l~~~-G~~~~~~~~~~ 113 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGG----QLFSAMIVRKPAHLFLDEI-GVAYDEQDTYV 113 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCS----TTCCCEEEETTTHHHHHHH-TCCCEECSSEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCC----cchHHHHcCcHHHHHHHHc-CCCcccCCCEE
Confidence 47999999999999999999997 9999999999887653 3221 112222111110 00000 0111000000
Q ss_pred -CCCHHHHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCeE-EEEEc---------cC-----cEEEeCEEEEccCCC
Q psy2398 82 -YPNHSMMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDIW-EVELS---------NG-----KKKKYDFIAVCNGAQ 143 (433)
Q Consensus 82 -~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~-~v~~~---------~g-----~~~~~d~vIvAtG~~ 143 (433)
.....++...+.+.+.+ .++ .++++++|+.+..+++.. .+.+. ++ .++.+|.||+|||..
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred EecCHHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 11456666666666654 466 588999999998876543 33332 22 568999999999983
No 127
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.18 E-value=2.3e-11 Score=116.16 Aligned_cols=137 Identities=16% Similarity=0.246 Sum_probs=86.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC------CCc--ccCCC--------C-----CCccccceEeecCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL------GGV--WNSQA--------S-----CGRVYPSLHLISPKF 66 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~------Gg~--~~~~~--------~-----~~~~~~~~~~~~~~~ 66 (433)
+||+|||||++|+++|..|++.|++|+|+|+.+.. ++. +.... . ....+..........
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999997631 111 00000 0 000011111111110
Q ss_pred cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEE-ccCc--EEEeCEEEEccC
Q psy2398 67 NTQVPDYPMP-DNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVEL-SNGK--KKKYDFIAVCNG 141 (433)
Q Consensus 67 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~-~~g~--~~~~d~vIvAtG 141 (433)
...+...... ........+..+.+.+.+.+.+.++ .++++++|++++.+ ++.+.|++ .+|. ++.+|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 0000000000 0011123567788888888877777 69999999999875 35678887 6776 689999999999
Q ss_pred CCCCC
Q psy2398 142 AQRVA 146 (433)
Q Consensus 142 ~~s~p 146 (433)
.+|..
T Consensus 161 ~~S~v 165 (394)
T 1k0i_A 161 FHGIS 165 (394)
T ss_dssp TTCST
T ss_pred CCcHH
Confidence 98754
No 128
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.18 E-value=7.5e-11 Score=116.99 Aligned_cols=177 Identities=11% Similarity=0.078 Sum_probs=107.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC-CCCCcccCCCCCC----ccccceEeecCCC--------cccCC-
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES-DLGGVWNSQASCG----RVYPSLHLISPKF--------NTQVP- 71 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~-~~Gg~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~- 71 (433)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|+.+......+ .....+.. .... ...|.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~a-l~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDA-LGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHH-HTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHh-cccHHHHHHHhcCCchhh
Confidence 45899999999999999999999999999999975 4555332110000 00000000 0000 00000
Q ss_pred --CCCCCCCC-C-CCCCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCeEE-EEEccCcEEEeCEEEEccCCCCC
Q psy2398 72 --DYPMPDNY-P-VYPNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDIWE-VELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 72 --~~~~~~~~-~-~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~-v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
...-+... + ....+..+.+.+.+.++++ ++ .+ ++..|+.+..+++.+. |.+.+|..+.+|.||+|||.++.
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00000000 0 1234667888888888775 66 35 4668999887777665 88888888999999999999542
Q ss_pred CCCCCCCCCCCCceeccCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec
Q psy2398 146 ARYPNYSGYFSGEILHSMDYKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR 205 (433)
Q Consensus 146 p~~p~i~g~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~ 205 (433)
.+.+.| .... .+.+++ |+.++++++..|.+.|.+|..+...
T Consensus 176 --~~i~~G----~~~~----------~~g~~v---G~~~a~~la~~L~~~G~kv~~l~tG 216 (641)
T 3cp8_A 176 --GLIHIG----MDHF----------PGGRST---AEPPVEGLTESLASLGFSFGRLKTG 216 (641)
T ss_dssp --CEEEET----TEEE----------ECSSST---TSCCBCSHHHHHHHTTCCEEEEEEE
T ss_pred --ccceee----eeee----------cccccc---CCchhhhhHHHHHhCCceEEeecCC
Confidence 222222 1100 011211 3678899999999999998776543
No 129
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.18 E-value=5.8e-11 Score=113.94 Aligned_cols=134 Identities=16% Similarity=0.232 Sum_probs=79.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCc-----ccCCCCC-------C-----------ccc--cceEee
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGV-----WNSQASC-------G-----------RVY--PSLHLI 62 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~-----~~~~~~~-------~-----------~~~--~~~~~~ 62 (433)
.+|+||||||+||++|..|+++|++|+||||.+..... ....... . ..+ ......
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 48999999999999999999999999999997654211 0000000 0 000 000000
Q ss_pred cCC-CcccCCC--CCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEEccCcEEEeC
Q psy2398 63 SPK-FNTQVPD--YPMPDNYP----VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVELSNGKKKKYD 134 (433)
Q Consensus 63 ~~~-~~~~~~~--~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~~~g~~~~~d 134 (433)
... ....... .+...... ....+..+.+.+.+ . +...++++++|+.++.. ++.++|++.+|+++++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~--~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ad 156 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---G--LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVD 156 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHT---T--CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEES
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHh---h--ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEee
Confidence 000 0000000 00000000 01224444444432 2 33469999999999876 56789999999999999
Q ss_pred EEEEccCCCCCC
Q psy2398 135 FIAVCNGAQRVA 146 (433)
Q Consensus 135 ~vIvAtG~~s~p 146 (433)
.||.|+|.+|.-
T Consensus 157 lvVgADG~~S~v 168 (412)
T 4hb9_A 157 VLVGADGSNSKV 168 (412)
T ss_dssp EEEECCCTTCHH
T ss_pred EEEECCCCCcch
Confidence 999999998743
No 130
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=3.1e-10 Score=113.36 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=88.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC-CC-----------------CC-ccccceEeecC--C
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ-AS-----------------CG-RVYPSLHLISP--K 65 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~-~~-----------------~~-~~~~~~~~~~~--~ 65 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+...... .+ .. ........... .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 4799999999999999999999999999999985432111000 00 00 00000000000 0
Q ss_pred C--cccCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEEc-cC--cEEEeCEE
Q psy2398 66 F--NTQVPDYPM---PDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVELS-NG--KKKKYDFI 136 (433)
Q Consensus 66 ~--~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~~-~g--~~~~~d~v 136 (433)
. ...+..... .........+..+.+++.+.+++.|+ .++++++|+.+..+ ++.+.|++. +| .++.+|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 0 001111100 00111235688999999999988887 58899999999875 667888887 56 46999999
Q ss_pred EEccCCCC
Q psy2398 137 AVCNGAQR 144 (433)
Q Consensus 137 IvAtG~~s 144 (433)
|.|+|.+|
T Consensus 181 V~AdG~~S 188 (591)
T 3i3l_A 181 IDAGGSGG 188 (591)
T ss_dssp EECCGGGC
T ss_pred EECCCCcc
Confidence 99999966
No 131
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.17 E-value=1.1e-10 Score=110.53 Aligned_cols=63 Identities=19% Similarity=0.278 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
...+.+.+.+.+++.++ +++++++|++++.+++.|.|++.++ ++.+|.||+|+|.++....+.
T Consensus 148 ~~~l~~~l~~~~~~~G~--~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~ 210 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGC--AQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLPE 210 (372)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTSTT
T ss_pred HHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhccc
Confidence 45777888888888887 5888999999998777788988877 499999999999976544443
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.16 E-value=2.5e-10 Score=116.62 Aligned_cols=60 Identities=12% Similarity=0.277 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
....+...+.+.+++.|+ .++++++|+++..++++|.|++.+|.++.+|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGL--QIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 356778888888888887 699999999999988889999988778999999999999753
No 133
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.15 E-value=2.4e-10 Score=108.56 Aligned_cols=58 Identities=16% Similarity=0.071 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEccCcEEEeCEEEEccCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~~g~~~~~d~vIvAtG~~s 144 (433)
....+.+.+.+.+++.++ +++++++|++++.+++.|. |++.++ ++.+|.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGA--KLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 467788888888888887 6889999999998877887 888776 799999999999975
No 134
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.14 E-value=1.9e-10 Score=110.39 Aligned_cols=138 Identities=17% Similarity=0.138 Sum_probs=87.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCC-eEEEccCCCCCCcccC---CCC----------------CCccccceEeecCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNIN-YDLYEMESDLGGVWNS---QAS----------------CGRVYPSLHLISPKF 66 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~-v~v~e~~~~~Gg~~~~---~~~----------------~~~~~~~~~~~~~~~ 66 (433)
.+||+|||||++|+++|..|++.|++ |+|||+.+..+....- ... .......+.......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 48999999999999999999999999 9999998765421110 000 000000111111100
Q ss_pred --cccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCeEEEEEcc---C--cEEEeCEE
Q psy2398 67 --NTQVPDY-PMPDNYP-VYPNHSMMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDIWEVELSN---G--KKKKYDFI 136 (433)
Q Consensus 67 --~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g--~~~~~d~v 136 (433)
+...+.. ......+ ....+..+.+++.+.+.+ .+.. .++++++|+.++. ++++++++.+ | .++.+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~-~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQ-AVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTT-SEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCc-EEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEE
Confidence 0000000 0000011 234578888999888865 3521 5899999999988 6678888765 6 46899999
Q ss_pred EEccCCCCCC
Q psy2398 137 AVCNGAQRVA 146 (433)
Q Consensus 137 IvAtG~~s~p 146 (433)
|.|+|.+|..
T Consensus 162 V~AdG~~S~v 171 (410)
T 3c96_A 162 VGADGIHSAV 171 (410)
T ss_dssp EECCCTTCHH
T ss_pred EECCCccchh
Confidence 9999998754
No 135
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.14 E-value=3e-10 Score=115.02 Aligned_cols=140 Identities=16% Similarity=0.212 Sum_probs=89.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-cCCCeEEEccCCCCCCcccCCC--C-----------------CCccccceEeecC-
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE-GNINYDLYEMESDLGGVWNSQA--S-----------------CGRVYPSLHLISP- 64 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e~~~~~Gg~~~~~~--~-----------------~~~~~~~~~~~~~- 64 (433)
..+||+|||||++||++|..|++ .|++|+|||+.+..+....-.. + .+..........+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 45799999999999999999999 9999999999876532111000 0 0000011111110
Q ss_pred ----CCcc---cCCCCCCCC-CC-CCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC----eEEEEEc-----
Q psy2398 65 ----KFNT---QVPDYPMPD-NY-PVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED----IWEVELS----- 126 (433)
Q Consensus 65 ----~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~----~~~v~~~----- 126 (433)
..+. .++...... .. .....+..+.++|.+.+.+.++...++++++|+.++.+++ .+.+++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 0010 011000000 01 1235678899999999998875335899999999998642 5777765
Q ss_pred -cC--cEEEeCEEEEccCCCCC
Q psy2398 127 -NG--KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 127 -~g--~~~~~d~vIvAtG~~s~ 145 (433)
+| .++++|+||.|+|.+|.
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCH
T ss_pred CCCCeEEEEeCEEEECCCcchH
Confidence 35 46899999999999874
No 136
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.13 E-value=2.2e-10 Score=108.81 Aligned_cols=61 Identities=13% Similarity=0.099 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 82 YPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
......+.+.+.+.+++.++ +++++++|++++.+++.|.|++.++ ++.+|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGA--EIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTC--EEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCC--EEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH
Confidence 34567888888888888887 5888999999988777788888776 7999999999999754
No 137
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.12 E-value=8.3e-11 Score=111.66 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
....+.+.+.+.+++.|+ +++++++|+++..+++.|.|++.++ ++.+|.||+|+|.++.
T Consensus 152 ~~~~~~~~l~~~a~~~Gv--~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQG--QVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHH
Confidence 456778888888888887 5889999999999888899998877 7999999999999753
No 138
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.10 E-value=7.9e-10 Score=110.63 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=86.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCC-----CCccc------cceE------------eec
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQAS-----CGRVY------PSLH------------LIS 63 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~-----~~~~~------~~~~------------~~~ 63 (433)
.+||+|||||++|+++|..|++.|.+|+|+||.+..||....... ..... .+.. ...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 579999999999999999999999999999999988775433211 00000 0000 000
Q ss_pred CC--------------Cc----ccCCCC--CCCCCCC-------CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEE
Q psy2398 64 PK--------------FN----TQVPDY--PMPDNYP-------VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQ 116 (433)
Q Consensus 64 ~~--------------~~----~~~~~~--~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~ 116 (433)
+. ++ ..|... .....++ .......+.+.|.+.+++.++ .++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeEE
Confidence 00 00 001000 0000000 012357788889998988888 6999999999988
Q ss_pred eC-CeE-EEEEc--cCc--EEEeCEEEEccCCCCC
Q psy2398 117 YE-DIW-EVELS--NGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 117 ~~-~~~-~v~~~--~g~--~~~~d~vIvAtG~~s~ 145 (433)
++ +.. -|.+. +|+ ++.+|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 65 432 23333 564 5889999999999753
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.10 E-value=3e-10 Score=116.17 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc-EEEeCEEEEccCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK-KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~-~~~~d~vIvAtG~~s~ 145 (433)
....+.+.+.+.+++.|+ .++++++|+++..++++|.|.+.+|. ++.+|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGM--TCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 356777888888888887 69999999999998778999998876 7999999999999753
No 140
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.09 E-value=1.1e-09 Score=109.50 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=86.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCC-----CCc------cccceE------------ee
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQAS-----CGR------VYPSLH------------LI 62 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~-----~~~------~~~~~~------------~~ 62 (433)
..+||+|||||++|+++|..|++.|.+|+||||.+..||....... ... ...+.. ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 3479999999999999999999999999999999887764322110 000 000000 00
Q ss_pred cCC--------------Cc----ccC------CCCCCCCCC-C--CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEE
Q psy2398 63 SPK--------------FN----TQV------PDYPMPDNY-P--VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLE 115 (433)
Q Consensus 63 ~~~--------------~~----~~~------~~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~ 115 (433)
.+. ++ ..| .....+... + .......+.+.|.+.+++.++ .++++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEEE
Confidence 000 00 000 000000000 0 112367788889888988888 599999999998
Q ss_pred EeC-Ce---EEEEEccCc--EEEeCEEEEccCCCCC
Q psy2398 116 QYE-DI---WEVELSNGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 116 ~~~-~~---~~v~~~~g~--~~~~d~vIvAtG~~s~ 145 (433)
.++ +. +.+...+|+ ++.+|.||+|||.++.
T Consensus 278 ~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 765 54 333333564 5889999999999764
No 141
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.08 E-value=5.9e-10 Score=109.92 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEccCcEEEeCEEEEccCCC
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELSNGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~~g~~~~~d~vIvAtG~~ 143 (433)
+.+.+.+.+++.|. .|+++++|++|..++++++ |++.+|+++.||.||.+++..
T Consensus 223 l~~aL~~~~~~~Gg--~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 223 LVQGMIKLFQDLGG--EVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHTTC--EEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred hHHHHHHHHHHhCC--ceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 44445555666666 6999999999999888776 889999999999999998863
No 142
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.06 E-value=5.9e-10 Score=107.73 Aligned_cols=41 Identities=27% Similarity=0.365 Sum_probs=38.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
++||+|||||++|++||..|++.|.+|+|+|+++.+||.+.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 37999999999999999999999999999999988988765
No 143
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.06 E-value=6.2e-10 Score=106.33 Aligned_cols=57 Identities=16% Similarity=0.037 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
...+.+.+.+.+++.++ .++++++|+++..+++.|.|++.++ ++.+|.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv--~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGA--TLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCC--EEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 35667777777878787 5899999999998878888888766 699999999999864
No 144
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.05 E-value=2.1e-09 Score=102.28 Aligned_cols=58 Identities=21% Similarity=0.200 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
...+.+.+.+.+++.++ +++++++|++++.+++.|.|++.++ ++.+|.||+|+|.++.
T Consensus 149 ~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 149 SENCIRAYRELAEARGA--KVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCC--EEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 46788888888888888 5888999999998777788888766 6999999999998653
No 145
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.03 E-value=1.4e-09 Score=104.01 Aligned_cols=59 Identities=17% Similarity=0.182 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC-eEEEEEccCcEEEeCEEEEccCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED-IWEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~-~~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
.....+.+.+.+.+++.++ +++++++|+.+..+++ .+.|++.++ ++.+|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGV--DIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCC--EEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 3456788888888888887 6899999999998644 477888877 699999999999865
No 146
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.00 E-value=2.2e-09 Score=98.62 Aligned_cols=131 Identities=16% Similarity=0.248 Sum_probs=79.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCC-cccCCCCCCccccceEeecCCCcccCCC--CCCCC--CC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGG-VWNSQASCGRVYPSLHLISPKFNTQVPD--YPMPD--NY 79 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~ 79 (433)
.+||+|||||++|+++|..|+++ |++|+|+|+...+|| .|... ..+...... +.....+.. .++.. .+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g----~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~ 153 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGG----QLFSAMVMR-KPADVFLDEVGVPYEDEGDY 153 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCB----TTCCCEEEE-TTTHHHHHHHTCCCEECSSE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCC----ccchhhhcc-hHHHHHHHHcCCcccccCCe
Confidence 47999999999999999999997 999999999987764 44322 122222222 111110000 00000 01
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeC-----------------CeEEE---EE------c------
Q psy2398 80 PVYPNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYE-----------------DIWEV---EL------S------ 126 (433)
Q Consensus 80 ~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~-----------------~~~~v---~~------~------ 126 (433)
.......++.+.+.+.+... ++ .+++++.|+.+..++ +...| .+ .
T Consensus 154 ~~~~~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~ 231 (344)
T 3jsk_A 154 VVVKHAALFTSTVLSKVLQRPNV--KLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQS 231 (344)
T ss_dssp EEESCHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSS
T ss_pred EEEecHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCccc
Confidence 11123456667777666663 66 588899998887653 21111 11 1
Q ss_pred --cCcEEEeCEEEEccCCCC
Q psy2398 127 --NGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 127 --~g~~~~~d~vIvAtG~~s 144 (433)
+..++.+++||+|||+.+
T Consensus 232 ~~d~~~i~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 232 AMDPNTINAPVIISTTGHDG 251 (344)
T ss_dssp CCBCEEEECSEEEECCCSSS
T ss_pred ccCceEEEcCEEEECCCCCc
Confidence 224689999999999854
No 147
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.99 E-value=8.5e-09 Score=101.44 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cCc--EEEeCEEEEccCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g~--~~~~d~vIvAtG~~s~ 145 (433)
....+...+.+.+.+.|+ .++++++|+++..+++.|.|++. +|+ ++.+|.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv--~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGG--EVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 356777888888888887 58889999999988778888874 454 6899999999999753
No 148
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.97 E-value=2e-09 Score=109.26 Aligned_cols=137 Identities=16% Similarity=0.172 Sum_probs=86.6
Q ss_pred CCcEEEECCChHHHHHHHHHHh-----cCCCeEEEccCCCCCCc---ccCCC----------------CCCccccceEee
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSE-----GNINYDLYEMESDLGGV---WNSQA----------------SCGRVYPSLHLI 62 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~-----~g~~v~v~e~~~~~Gg~---~~~~~----------------~~~~~~~~~~~~ 62 (433)
.+||+||||||+||++|..|++ .|++|+|||+.+..... ..... ........+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 99999999997643210 00000 001111111111
Q ss_pred cCC---Ccc---cCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHcC---CCcceEeCcEEEEEEEeC--------CeEEE
Q psy2398 63 SPK---FNT---QVPDYPM--PDNYPVYPNHSMMLDYLRSYAKKFD---VYNHSIFNTEVINLEQYE--------DIWEV 123 (433)
Q Consensus 63 ~~~---~~~---~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~i~~~~~V~~v~~~~--------~~~~v 123 (433)
.+. .+. .+++... ........++..+.++|.+.+.+.+ + .++++++|+.++.++ ..+++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEecCcccccCCCCCEEE
Confidence 110 010 0111000 0011123568889999999888876 5 599999999998864 35666
Q ss_pred EEc------------------------------------------cC--cEEEeCEEEEccCCCCC
Q psy2398 124 ELS------------------------------------------NG--KKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 124 ~~~------------------------------------------~g--~~~~~d~vIvAtG~~s~ 145 (433)
++. +| .++++|+||.|+|.+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW 231 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCH
Confidence 653 34 46899999999999875
No 149
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.96 E-value=2.6e-09 Score=106.30 Aligned_cols=59 Identities=7% Similarity=-0.105 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEcc---C--cEEEeCEEEEccCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSN---G--KKKKYDFIAVCNGAQR 144 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~---g--~~~~~d~vIvAtG~~s 144 (433)
....+...+...+.+.|. .++++++|+++..+++. |.|++.+ | .++.+|.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~--~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGA--VALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 346677777777888887 58999999999988665 4576654 3 3689999999999975
No 150
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.96 E-value=6.3e-09 Score=101.60 Aligned_cols=41 Identities=22% Similarity=0.245 Sum_probs=37.0
Q ss_pred ceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCC
Q psy2398 104 HSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 104 ~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
.|+++++|++|+.++++|.|++.+|+++.||.||+|+....
T Consensus 249 ~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 249 KVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred EEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 68999999999998778999999998899999999998743
No 151
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.95 E-value=1.3e-08 Score=100.36 Aligned_cols=39 Identities=21% Similarity=0.315 Sum_probs=36.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCc
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGV 45 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~ 45 (433)
.+||+|||||++||++|..|++.|.+|+|+||.+..||.
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999988764
No 152
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.94 E-value=3.5e-10 Score=108.37 Aligned_cols=58 Identities=16% Similarity=0.019 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEE---------EEEEeCCeEEEEEccCcEEEeCEEEEccCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVI---------NLEQYEDIWEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~---------~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
....+.+.+.+.+++.++ .+.++++|+ .+..+++.|.|.+.++ ++.+|.||+|+|.++
T Consensus 170 ~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGA--GLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp CHHHHHHHHHHHHHTTTC--EEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHCCC--EEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 346678888888888787 588899999 7776666677766665 799999999999975
No 153
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.94 E-value=2e-09 Score=107.03 Aligned_cols=60 Identities=18% Similarity=0.406 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC--eEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED--IWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~--~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
..+..+.+++.+.+++.++ .++++ +|+.++.+++ .+.|++.+|.++.+|.||+|+|.+|.
T Consensus 162 i~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGV--NRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCC--EEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 3568889999999988887 57888 8999988633 36788888878999999999999664
No 154
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.92 E-value=2.2e-08 Score=100.03 Aligned_cols=137 Identities=16% Similarity=0.121 Sum_probs=84.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCC-----CCccccceEe-ecC-----------C----
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQAS-----CGRVYPSLHL-ISP-----------K---- 65 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~-----~~~~~~~~~~-~~~-----------~---- 65 (433)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..||....... .......... .+. .
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 469999999999999999999999999999999888765432210 0000000000 000 0
Q ss_pred ----------------Cc----ccCC------CCCCCCCC-C--CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEE
Q psy2398 66 ----------------FN----TQVP------DYPMPDNY-P--VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQ 116 (433)
Q Consensus 66 ----------------~~----~~~~------~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~ 116 (433)
++ ..|. ....+... + .......+.+.|.+.+++.++ +++++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEEE
Confidence 00 0000 00000000 0 012356788889888988888 6999999999976
Q ss_pred eC-Ce-EEEEEc--cCc--EEEeCEEEEccCCCCC
Q psy2398 117 YE-DI-WEVELS--NGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 117 ~~-~~-~~v~~~--~g~--~~~~d~vIvAtG~~s~ 145 (433)
++ +. +-|.+. +|+ ++.+|.||+|||.++.
T Consensus 284 ~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 284 DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp C--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 54 43 234433 554 5889999999999653
No 155
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.92 E-value=1.9e-09 Score=107.31 Aligned_cols=60 Identities=18% Similarity=0.326 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEeCCe--EEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQYEDI--WEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~~~~--~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
..+..+.+++.+.+++. |+ .++++ +|+.+..++++ +.|++.+|.++.+|.||+|+|.+|.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 56788999999999988 88 58889 99999876433 6788888878999999999998653
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.91 E-value=1.3e-08 Score=98.87 Aligned_cols=102 Identities=19% Similarity=0.139 Sum_probs=83.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||++|+.+|..|++.|.+|+++|+.+.+. + . ..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------------------------~----~--~~ 207 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--------------------------------P----T--MD 207 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------T----T--SC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------------c----c--cC
Confidence 34789999999999999999999999999999876431 0 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.+++.+.+++.++.++.+|.||+|+|. .|+.+
T Consensus 208 ~~~~~~l~~~l~~~Gv--~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~--~p~~~ 267 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGL--TIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGR--RPYTE 267 (455)
T ss_dssp HHHHHHHHHHHHHHTC--EEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE--EECCT
T ss_pred HHHHHHHHHHHHHCCC--EEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCC--CcCCC
Confidence 5667777777788888 589999999999887778888878888999999999998 55554
No 157
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.91 E-value=5.4e-09 Score=100.73 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=37.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
+||+|||||++||+||..|++.|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999999887654
No 158
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.90 E-value=1e-08 Score=101.49 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCe--EEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDI--WEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~--~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
..+..+.+++.+.+.+ .++ .++++ +|+.++.++++ +.|++.+|.++.+|.||.|+|.+|.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGV--THIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4578899999999988 788 58888 69999886433 4677777767999999999999764
No 159
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.89 E-value=4.8e-09 Score=100.98 Aligned_cols=41 Identities=20% Similarity=0.366 Sum_probs=37.7
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
+||+|||||++||++|..|++.|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999886543
No 160
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.87 E-value=7.4e-09 Score=102.53 Aligned_cols=42 Identities=21% Similarity=0.447 Sum_probs=38.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
.++||+|||||++||+||..|++.|++|+|+|+++.+||...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 457999999999999999999999999999999999988653
No 161
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.86 E-value=5.4e-09 Score=103.25 Aligned_cols=60 Identities=20% Similarity=0.237 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe--EEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI--WEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~--~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
..+..+.+.+.+.+.+.|+ .++++ +|+.++.++++ +.|++.+|+++.+|.||.|+|.+|.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGV--RHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4578899999999988887 58888 99999886433 6788888878999999999999764
No 162
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.85 E-value=8.8e-09 Score=107.63 Aligned_cols=58 Identities=19% Similarity=0.167 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeE-EEEEccCcEEEeCEEEEccCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIW-EVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~-~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
....+.+.+.+.+++.|+ +++++++|++++.+++.+ .|.+.+| ++.||.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv--~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGV--TYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCC--EEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 456788888888888887 588899999999876664 5777776 799999999999975
No 163
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.85 E-value=2.6e-08 Score=94.51 Aligned_cols=101 Identities=17% Similarity=0.230 Sum_probs=83.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. . ....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------~-~~~~ 187 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------------------------G-LLHP 187 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------T-TSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------------------------c-ccCH
Confidence 57899999999999999999999999999998764310 0 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ +++++++|++++.+++.+.+++.+|+++.+|.||+|+|. .|+.
T Consensus 188 ~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~--~p~~ 245 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGV--RFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL--RPRT 245 (384)
T ss_dssp HHHHHHHHHHHTTTC--EEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHcCC--EEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC--CcCH
Confidence 667788888888888 589999999999887788899988888999999999998 4443
No 164
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.85 E-value=2.1e-09 Score=97.14 Aligned_cols=41 Identities=24% Similarity=0.477 Sum_probs=38.6
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
+||+||||||+||+||..|+++|++|+||||.+.+||.+..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 79999999999999999999999999999999999987653
No 165
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.85 E-value=2.9e-08 Score=96.63 Aligned_cols=102 Identities=23% Similarity=0.287 Sum_probs=83.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.. ....
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~~ 210 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP--------------------------------------QGDP 210 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------------------------TSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc--------------------------------------ccCH
Confidence 47899999999999999999999999999998765410 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-c--Cc--EEEeCEEEEccCCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-N--GK--KKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~--g~--~~~~d~vIvAtG~~s~p~~p~ 150 (433)
++.+.+.+..++.++ +++++++|++++.+++.+.+++. + |+ ++.+|.||+|+|. .|+.+.
T Consensus 211 ~~~~~l~~~l~~~gV--~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~--~p~~~~ 275 (464)
T 2eq6_A 211 ETAALLRRALEKEGI--RVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR--KPRTEG 275 (464)
T ss_dssp HHHHHHHHHHHHTTC--EEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE--EESCTT
T ss_pred HHHHHHHHHHHhcCC--EEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc--ccCCCC
Confidence 677788888888888 59999999999987777778775 5 66 7999999999998 666543
No 166
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.84 E-value=2.2e-08 Score=91.42 Aligned_cols=104 Identities=18% Similarity=0.369 Sum_probs=64.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCC-CcccCCCCCCccccceEeecCC--CcccCCCCCCCC--CC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLG-GVWNSQASCGRVYPSLHLISPK--FNTQVPDYPMPD--NY 79 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~G-g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~ 79 (433)
.+||+|||||++|+++|..|++. |++|+|+|+.+..| |.|... ..+......... .+..+ ..++.. .+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g----~~~~~~~~~~~~~~~L~~~-Gv~~~~~g~~ 139 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGG----QLFSAMVMRKPAHLFLQEL-EIPYEDEGDY 139 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCG----GGCCCEEEETTTHHHHHHT-TCCCEECSSE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccC----cccchhhhhhHHHHHHHhh-CcccccCCCe
Confidence 35999999999999999999998 99999999998887 445322 122222222110 00000 011100 00
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCcceEeCcEEEEEEEe
Q psy2398 80 PVYPNHSMMLDYLRSYAKKF-DVYNHSIFNTEVINLEQY 117 (433)
Q Consensus 80 ~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~v~~~ 117 (433)
.......++.+.+.+.+... ++ .++.+++|+.+..+
T Consensus 140 ~~~~~~~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 140 VVVKHAALFISTVLSKVLQLPNV--KLFNATCVEDLVTR 176 (326)
T ss_dssp EEESCHHHHHHHHHHHHHTSTTE--EEETTEEEEEEEEC
T ss_pred EEEcchHHHHHHHHHHHHHhcCc--EEEecceeeeeeec
Confidence 01113566677777767664 66 57889999999775
No 167
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.81 E-value=5.1e-08 Score=94.87 Aligned_cols=102 Identities=17% Similarity=0.194 Sum_probs=83.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .+ .
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------~~--~ 206 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF------------------------------------QF--D 206 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------TS--C
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc------------------------------------cc--C
Confidence 357899999999999999999999999999998765410 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCc-EEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGK-KKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~-~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.+++.+.|++.+|+ ++.+|.||+|+|. .|+..
T Consensus 207 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~--~p~~~ 267 (463)
T 2r9z_A 207 PLLSATLAENMHAQGI--ETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR--APNTR 267 (463)
T ss_dssp HHHHHHHHHHHHHTTC--EEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE--EESCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC--CcCCC
Confidence 4566777777888888 58999999999987667888898888 8999999999998 66653
No 168
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.79 E-value=5e-08 Score=94.62 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=82.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.. .+ .
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~~--~ 207 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP------------------------------------SF--D 207 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------TS--C
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh------------------------------------hh--h
Confidence 357899999999999999999999999999998765310 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.++ +.+.+++.+|+++.+|.||+|+|. .|+..
T Consensus 208 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~--~p~~~ 268 (450)
T 1ges_A 208 PMISETLVEVMNAEGP--QLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR--EPAND 268 (450)
T ss_dssp HHHHHHHHHHHHHHSC--EEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE--EESCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC--CcCCC
Confidence 4567777788888888 589999999998764 347888888888999999999998 66654
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.78 E-value=6.3e-08 Score=94.11 Aligned_cols=102 Identities=23% Similarity=0.239 Sum_probs=81.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+.. . ..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~~ 210 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS------------------------------------G--FE 210 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------T--SC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------------------------------------c--cC
Confidence 357999999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|++++.+++...+++. ++.++.+|.||+|+|. .|+.+
T Consensus 211 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~--~p~~~ 273 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGV--EVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGR--RPNTD 273 (455)
T ss_dssp HHHHHHHHHHHHHTTC--EEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCE--EESCS
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCC--CcccC
Confidence 5667778888888888 58999999999987766777764 3457899999999998 56543
No 170
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.77 E-value=8.6e-08 Score=94.46 Aligned_cols=103 Identities=15% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCC
Q psy2398 4 KNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYP 83 (433)
Q Consensus 4 ~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
...+.+++|||||+.|+..|..+++.|.+|+++++...+ +.
T Consensus 220 ~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L-------------------------------------~~-- 260 (542)
T 4b1b_A 220 KKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL-------------------------------------RG-- 260 (542)
T ss_dssp SSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS-------------------------------------TT--
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc-------------------------------------cc--
Confidence 345689999999999999999999999999999875322 01
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
...++.+.+....++.++ .+++++.+..++..++...+.+.++..+.+|.|++|+|. .|+..
T Consensus 261 ~D~ei~~~l~~~l~~~gi--~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR--~Pnt~ 322 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR--KGDID 322 (542)
T ss_dssp SCHHHHHHHHHHHHHTTC--EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE--EESCG
T ss_pred cchhHHHHHHHHHHhhcc--eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc--cCCcc
Confidence 125677888888888888 589999999999988999999998888999999999997 66654
No 171
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.76 E-value=1.6e-08 Score=98.85 Aligned_cols=40 Identities=30% Similarity=0.458 Sum_probs=37.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCCcc
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGGVW 46 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg~~ 46 (433)
++||+|||||++||++|..|++.| .+|+|+|+++.+||.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCcee
Confidence 479999999999999999999999 9999999999888853
No 172
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.75 E-value=2.3e-08 Score=99.95 Aligned_cols=142 Identities=11% Similarity=0.055 Sum_probs=84.5
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCc---------ccCCCC-CCccccceE---eecCCCc
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGV---------WNSQAS-CGRVYPSLH---LISPKFN 67 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~---------~~~~~~-~~~~~~~~~---~~~~~~~ 67 (433)
|++....+||+|||||++|+++|..|++.|.+|+|+||....+|. +..... ..+ +.... +......
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds-~~~~~~d~~~~g~~~ 79 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDN-WEWHMYDTVKGSDYI 79 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCC-HHHHHHHHHHHTTTC
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCC-HHHHHHHHHHhcCCC
Confidence 565555689999999999999999999999999999998755321 111110 000 00000 0000000
Q ss_pred ------------------------ccCCCCC--------CCCC--------CCC--C---CCHHHHHHHHHHHHHHcCCC
Q psy2398 68 ------------------------TQVPDYP--------MPDN--------YPV--Y---PNHSMMLDYLRSYAKKFDVY 102 (433)
Q Consensus 68 ------------------------~~~~~~~--------~~~~--------~~~--~---~~~~~~~~~l~~~~~~~~~~ 102 (433)
..|.... .+.. ... + .....+.+.+.+.+.+.++
T Consensus 80 ~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv- 158 (588)
T 2wdq_A 80 GDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHT- 158 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCC-
Confidence 0010000 0000 000 0 0135677888888888787
Q ss_pred cceEeCcEEEEEEEe-CCe-EEEEE---ccCc--EEEeCEEEEccCCCCC
Q psy2398 103 NHSIFNTEVINLEQY-EDI-WEVEL---SNGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 103 ~~i~~~~~V~~v~~~-~~~-~~v~~---~~g~--~~~~d~vIvAtG~~s~ 145 (433)
.+++++.|+.+..+ ++. +-|.. .+++ .+.++.||+|||.++.
T Consensus 159 -~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 159 -TIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp -EEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred -EEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 69999999999875 443 23333 3454 5889999999999753
No 173
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.74 E-value=9e-08 Score=93.64 Aligned_cols=102 Identities=19% Similarity=0.300 Sum_probs=82.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||+.|+.+|..|++.|.+|+++|+.+.+... ..
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~~ 223 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------------------------MD 223 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------------------------SC
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------------------------cC
Confidence 3578999999999999999999999999999998754110 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEE--eCCeEEEEEc-----cCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQ--YEDIWEVELS-----NGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~--~~~~~~v~~~-----~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|++++. +++.+.+++. ++.++.+|.||+|+|. .|+..
T Consensus 224 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p~~~ 290 (478)
T 1v59_A 224 GEVAKATQKFLKKQGL--DFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR--RPYIA 290 (478)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE--EECCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC--CcCCC
Confidence 5677888888888888 5999999999987 5566777765 3457899999999998 66554
No 174
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.73 E-value=8.8e-08 Score=95.97 Aligned_cols=138 Identities=11% Similarity=0.122 Sum_probs=80.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcC--CCeEEEccCCCCCC--------cccCCCCCCccccce---EeecCCCc-----
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGN--INYDLYEMESDLGG--------VWNSQASCGRVYPSL---HLISPKFN----- 67 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~~~Gg--------~~~~~~~~~~~~~~~---~~~~~~~~----- 67 (433)
..+||+|||||++|+++|..|++.| .+|+|+||....++ ......+..+ +... .+.....+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds-~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDS-FEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCC-HHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCC-HHHHHHHHHHhcCCCCCHHH
Confidence 4579999999999999999999999 99999999765432 1111000000 0000 00000000
Q ss_pred -------------------ccCCCCC--------CCCC-CC--CCC---CHHHHHHHHHHHHHHcC-CCcceEeCcEEEE
Q psy2398 68 -------------------TQVPDYP--------MPDN-YP--VYP---NHSMMLDYLRSYAKKFD-VYNHSIFNTEVIN 113 (433)
Q Consensus 68 -------------------~~~~~~~--------~~~~-~~--~~~---~~~~~~~~l~~~~~~~~-~~~~i~~~~~V~~ 113 (433)
..|.... ++.. .+ .+. ....+...+.+.+.+.+ + .+++++.|+.
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv--~i~~~~~v~~ 160 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQI--QRFDEHFVLD 160 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTE--EEEETEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCc--EEEeCCEEEE
Confidence 0011000 0000 00 001 13567777777777666 5 5888999999
Q ss_pred EEEeCCe---EEEE-EccCc--EEEeCEEEEccCCCCCC
Q psy2398 114 LEQYEDI---WEVE-LSNGK--KKKYDFIAVCNGAQRVA 146 (433)
Q Consensus 114 v~~~~~~---~~v~-~~~g~--~~~~d~vIvAtG~~s~p 146 (433)
+..+++. ..+. +.+|+ .+.++.||+|||.++..
T Consensus 161 l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 161 ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp EEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred EEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 9887553 2222 24565 58999999999997644
No 175
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.71 E-value=3.4e-09 Score=100.57 Aligned_cols=121 Identities=16% Similarity=0.225 Sum_probs=76.7
Q ss_pred CcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCC---CCcccCCCC--C----Cccc-c-----------ceEeecC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDL---GGVWNSQAS--C----GRVY-P-----------SLHLISP 64 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~---Gg~~~~~~~--~----~~~~-~-----------~~~~~~~ 64 (433)
+||+|||||++|+++|..|++. |++|+|+|+.+.. |+....... . .... . ...+...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999999 9999999998765 321111000 0 0000 0 0000000
Q ss_pred CCcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCC
Q psy2398 65 KFNTQVPDYPMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQR 144 (433)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s 144 (433)
... +.. ...... ....+.++.+.+.+.+...++ .++++++|+.++.. .++.+|.||+|+|.+|
T Consensus 81 g~~--~~~-~~~~~~-~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 81 NEP--SLM-STGVLL-CGVERRGLVHALRDKCRSQGI--AIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SSE--EEC-CCCSCE-EEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred Cee--EEe-cCCCce-eeecHHHHHHHHHHHHHHCCC--EEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 000 000 000000 134688999999999988887 58999998877531 1258999999999987
Q ss_pred C
Q psy2398 145 V 145 (433)
Q Consensus 145 ~ 145 (433)
.
T Consensus 144 ~ 144 (381)
T 3c4a_A 144 K 144 (381)
T ss_dssp G
T ss_pred h
Confidence 6
No 176
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.70 E-value=7.8e-08 Score=94.11 Aligned_cols=101 Identities=24% Similarity=0.257 Sum_probs=82.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.. . -.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------~--~~ 225 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ------------------------------------G--AD 225 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------------------------T--SC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------------------------c--cC
Confidence 357999999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc----CcEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN----GKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~----g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.++ +++++++|.+++.+++...+++.+ ++++.+|.||+|+|. .|+.
T Consensus 226 ~~~~~~l~~~l~~~gV--~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~--~p~~ 288 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFD--NIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR--APNG 288 (482)
T ss_dssp HHHHHHHHHHHGGGEE--EEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE--EECG
T ss_pred HHHHHHHHHHHHhcCC--EEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC--CcCC
Confidence 5667777777877787 589999999999877777788776 667899999999998 5554
No 177
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.70 E-value=6.8e-08 Score=93.68 Aligned_cols=58 Identities=24% Similarity=0.293 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEE---------------eCCe-EEEEEccCcEE--EeCEEEEccCCCC
Q psy2398 84 NHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQ---------------YEDI-WEVELSNGKKK--KYDFIAVCNGAQR 144 (433)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~---------------~~~~-~~v~~~~g~~~--~~d~vIvAtG~~s 144 (433)
....+.+.+.+.+++.|+ +++++++|+++.. +++. |.|.+.+| ++ .+|.||+|+|.++
T Consensus 179 ~~~~l~~~L~~~~~~~Gv--~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGV--EFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHhCCC--EEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 456788888888888887 5889999999987 4443 56788777 58 9999999999865
No 178
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.70 E-value=1.2e-07 Score=94.65 Aligned_cols=39 Identities=33% Similarity=0.543 Sum_probs=35.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGG 44 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg 44 (433)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 458999999999999999999999999999999865444
No 179
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=1.6e-07 Score=92.40 Aligned_cols=101 Identities=16% Similarity=0.304 Sum_probs=82.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . -..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~d~ 217 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR------------------------------------K--FDE 217 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT------------------------------------T--SCH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc------------------------------------c--cch
Confidence 57899999999999999999999999999998765410 0 125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEccCcE-EEeCEEEEccCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSNGKK-KKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~g~~-~~~d~vIvAtG~~s~p~~p 149 (433)
++.+.+.+..++.++ +++++++|++++.++ +.+.+++.+|++ +.+|.||+|+|. .|+..
T Consensus 218 ~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~--~p~~~ 278 (500)
T 1onf_A 218 SVINVLENDMKKNNI--NIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR--SPDTE 278 (500)
T ss_dssp HHHHHHHHHHHHTTC--EEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB--CCTTT
T ss_pred hhHHHHHHHHHhCCC--EEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC--CcCCC
Confidence 667778888888888 599999999998753 447888888877 999999999998 56553
No 180
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.3e-07 Score=92.52 Aligned_cols=101 Identities=11% Similarity=0.125 Sum_probs=81.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~d 225 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR------------------------------------K--FD 225 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------T--SC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc------------------------------------c--cC
Confidence 357899999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe--EEEEEccC-cEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI--WEVELSNG-KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~--~~v~~~~g-~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.|+ +++++++|++++.++++ ..|++.+| .++.+|.||+|+|. .|+.
T Consensus 226 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~--~p~~ 287 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGI--NVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR--KSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHHTC--EEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHhCCe--EEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC--CCcc
Confidence 4567777777888888 59999999999875433 77888888 78999999999998 5655
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.69 E-value=6.7e-08 Score=93.67 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=79.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..++++|||+|++|+.+|..|++.|.+|+++|+.+.+... ...
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~ 190 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------------------------YLD 190 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------------TCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------------------------cCC
Confidence 4679999999999999999999999999999987643110 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.++..+.+.+ ++.++.+|.||+|+|. .|+.+
T Consensus 191 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~--~p~~~ 249 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNI--TIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGV--RPNTA 249 (447)
T ss_dssp HHHHHHHHHHHHTTTE--EEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCE--EESCG
T ss_pred HHHHHHHHHHHHhCCC--EEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCC--CCChH
Confidence 5677888888888887 5889999999986533334555 4567999999999998 56544
No 182
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.68 E-value=1.8e-07 Score=91.91 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=83.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~d 222 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP------------------------------------Y--ED 222 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC------------------------------------C--SS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------c--cC
Confidence 357899999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.|+ +++++++|++++.+++.+.+++.++.++.+|.||+|+|. .|+.
T Consensus 223 ~~~~~~l~~~l~~~GV--~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~--~p~~ 281 (499)
T 1xdi_A 223 ADAALVLEESFAERGV--RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGS--VPNT 281 (499)
T ss_dssp HHHHHHHHHHHHHTTC--EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE--EECC
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCC--CcCC
Confidence 4677788888888898 599999999999876667888888888999999999998 5554
No 183
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.67 E-value=1.8e-07 Score=91.34 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=81.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-.
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~-----~~~ 219 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG--------------------------------V-----GID 219 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC--------------------------------S-----SCC
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC--------------------------------c-----ccC
Confidence 357899999999999999999999999999998765410 0 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEE-----ccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVEL-----SNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~-----~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|++++.+++. +.+++ .++.++.+|.||+|+|. .|+..
T Consensus 220 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~--~p~~~ 285 (474)
T 1zmd_A 220 MEISKNFQRILQKQGF--KFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR--RPFTK 285 (474)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE--EECCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC--CcCCC
Confidence 5677788888888898 59999999999886554 66664 34567999999999998 56543
No 184
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.67 E-value=1.7e-07 Score=91.20 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=81.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~~ 211 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP------------------------------------N--ED 211 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------T--SC
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------c--cC
Confidence 357999999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc-cC--cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS-NG--KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~-~g--~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|++++.+++...+++. +| .++.+|.||+|+|. .|+..
T Consensus 212 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~--~p~~~ 274 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGV--TILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF--APNVE 274 (464)
T ss_dssp HHHHHHHHHHHHHHTC--EEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE--EECCS
T ss_pred HHHHHHHHHHHHHcCC--EEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC--CccCC
Confidence 5667778888888888 59999999999886655667765 55 56899999999998 66553
No 185
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.66 E-value=6e-08 Score=95.99 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGG 44 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg 44 (433)
...+||+|||||++|+++|..|++ |.+|+|+||....+|
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 345899999999999999999999 999999999886654
No 186
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.66 E-value=2e-07 Score=91.27 Aligned_cols=102 Identities=15% Similarity=0.143 Sum_probs=83.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc---CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG---NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~---g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
...+++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------------------------------------~- 228 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR------------------------------------G- 228 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST------------------------------------T-
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc------------------------------------c-
Confidence 357999999999999999999999 999999999865410 0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
-..++.+.+.+..++.++ +++++++|++++.++ +.+.|++.+|+++.+|.||+|+|. .|+..
T Consensus 229 -~d~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~--~p~~~ 291 (490)
T 1fec_A 229 -FDSELRKQLTEQLRANGI--NVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR--VPRSQ 291 (490)
T ss_dssp -SCHHHHHHHHHHHHHTTE--EEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE--EESCT
T ss_pred -cCHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC--CcCcc
Confidence 024667788888888888 589999999998864 357888888888999999999998 56553
No 187
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=9.1e-08 Score=92.98 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=78.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||++|+.+|..|++.|.+|+++|+.+.+.. . ..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~~ 211 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP------------------------------------T--YD 211 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------------------------T--SC
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc------------------------------------c--cC
Confidence 357899999999999999999999999999999865410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
.++.+++.+..++.++ +++++++|++++. + .+.++..+| .++.+|.||+|+|. .|+.+.
T Consensus 212 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~--~p~~~~ 272 (458)
T 1lvl_A 212 SELTAPVAESLKKLGI--ALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGR--RPRTKG 272 (458)
T ss_dssp HHHHHHHHHHHHHHTC--EEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCE--EECCSS
T ss_pred HHHHHHHHHHHHHCCC--EEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCC--CcCCCC
Confidence 4566777777888888 5899999999986 3 355553345 57999999999998 666543
No 188
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.66 E-value=2.2e-07 Score=90.55 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=80.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~d 214 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP------------------------------------T--LD 214 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------T--SC
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc------------------------------------c--CC
Confidence 357899999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHH-HHcCCCcceEeCcEEEEEEEeCCeEEEEEc--cC--cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYA-KKFDVYNHSIFNTEVINLEQYEDIWEVELS--NG--KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~-~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~--~g--~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+.. ++.++ +++++++|++++.+++.+.+++. +| .++.+|.||+|+|. .|+..
T Consensus 215 ~~~~~~l~~~l~~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~--~p~~~ 279 (468)
T 2qae_A 215 EDVTNALVGALAKNEKM--KFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR--RPFTG 279 (468)
T ss_dssp HHHHHHHHHHHHHHTCC--EEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE--EECCT
T ss_pred HHHHHHHHHHHhhcCCc--EEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc--ccCCC
Confidence 55677788888 88888 58999999999887656777765 55 56899999999998 55543
No 189
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.66 E-value=2.2e-07 Score=91.11 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=82.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc---CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG---NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~---g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
...+++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------------------------------------~- 232 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR------------------------------------G- 232 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT------------------------------------T-
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc------------------------------------c-
Confidence 357899999999999999999999 999999998765410 0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
-..++.+.+.+..++.++ +++++++|++++.++ +...|++.+|+++.+|.||+|+|. .|+.
T Consensus 233 -~d~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~--~p~~ 294 (495)
T 2wpf_A 233 -FDETIREEVTKQLTANGI--EIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR--IPRT 294 (495)
T ss_dssp -SCHHHHHHHHHHHHHTTC--EEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE--EECC
T ss_pred -cCHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC--cccc
Confidence 124567778888888888 599999999998764 357888888888999999999998 5554
No 190
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.65 E-value=1.7e-07 Score=92.67 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=81.7
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHHH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSM 87 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (433)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------~--~~~~ 256 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL------------------------------------I--KDNE 256 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------------------------------------C--CSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc------------------------------------c--ccHH
Confidence 7899999999999999999999999999998765410 0 1256
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe----EEEEEccCc-EEEeCEEEEccCCCCCCCC
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI----WEVELSNGK-KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~----~~v~~~~g~-~~~~d~vIvAtG~~s~p~~ 148 (433)
+.+++.+..++.|+ +++++++|++++.++++ +.|++.+|+ ++.+|.||+|+|. .|+.
T Consensus 257 ~~~~l~~~l~~~GV--~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~--~p~~ 318 (523)
T 1mo9_A 257 TRAYVLDRMKEQGM--EIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE--QPRS 318 (523)
T ss_dssp HHHHHHHHHHHTTC--EEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC--EECC
T ss_pred HHHHHHHHHHhCCc--EEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC--ccCC
Confidence 77888888888888 59999999999876444 778888876 7999999999998 5554
No 191
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.65 E-value=3.1e-07 Score=92.69 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL 42 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~ 42 (433)
...+||+|||||++|++||..|++.|.+|+|+||....
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 34589999999999999999999999999999998654
No 192
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.65 E-value=3e-07 Score=89.22 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=82.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~-~~d~ 189 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP------------------------------------K-YFDK 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------T-TCCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc------------------------------------c-cCCH
Confidence 46899999999999999999999999999998765410 0 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
++.+.+.+..++.++ +++++++|++++..++.+.|.++++ ++.+|.||+|+|. .|+..
T Consensus 190 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~--~p~~~ 247 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAV--IFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL--HPQLA 247 (452)
T ss_dssp HHHHHHHHHHHTTTE--EEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC--BCCCS
T ss_pred HHHHHHHHHHHHcCC--EEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC--CCChH
Confidence 677788888888888 5899999999997666667888777 7999999999998 55554
No 193
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.64 E-value=1.9e-07 Score=91.11 Aligned_cols=101 Identities=19% Similarity=0.244 Sum_probs=83.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..+++|||+|++|+.+|..|.+. |.+|+++++.+.+.. . ...
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~------------------------------------~-~~~ 201 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP------------------------------------G-FTS 201 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST------------------------------------T-TSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc------------------------------------c-ccC
Confidence 57899999999999999999999 999999998764310 0 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.++ +++++++|++++.+++...+.+.+|+++.+|.||+|+|. .|+.
T Consensus 202 ~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~--~p~~ 260 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDV--VVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV--SPNT 260 (472)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHhcCC--EEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC--CcCH
Confidence 5677888888888888 589999999998867777788888888999999999998 5543
No 194
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.64 E-value=2.9e-07 Score=88.25 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=83.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+-. .....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------------~~~~~ 194 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-------------------------------------RVAGE 194 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------------TTSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-------------------------------------hhcCH
Confidence 57899999999999999999999999999998764310 01136
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+++.+..++.|+ +++++++|+++..+++. ..|++.+|+++.+|.||+|+|. .|+.
T Consensus 195 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~--~p~~ 253 (415)
T 3lxd_A 195 ALSEFYQAEHRAHGV--DLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI--VPCV 253 (415)
T ss_dssp HHHHHHHHHHHHTTC--EEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC--EESC
T ss_pred HHHHHHHHHHHhCCC--EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC--ccCh
Confidence 677888888888898 58999999999886544 4688889989999999999998 5554
No 195
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.64 E-value=3.6e-07 Score=89.62 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=82.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~d 238 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------------------------------------G--MD 238 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------------------------------------S--SC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------------------------------------c--CC
Confidence 457899999999999999999999999999998765410 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc---C--cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN---G--KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g--~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ .++++++|++++.+++...+++.+ | .++.+|.||+|+|. .|+..
T Consensus 239 ~~~~~~l~~~l~~~gV--~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~--~p~~~ 303 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGI--DFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR--KPSTD 303 (491)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC--EECCT
T ss_pred HHHHHHHHHHHHhCCC--EEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC--ccCCC
Confidence 5667778888888888 589999999999887777777763 4 57899999999998 66654
No 196
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.64 E-value=3.4e-07 Score=89.75 Aligned_cols=102 Identities=18% Similarity=0.248 Sum_probs=80.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~d 214 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--------------------------------------LQD 214 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--------------------------------------CCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--------------------------------------cCC
Confidence 457999999999999999999999999999999875410 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc--cC--cEEEeCEEEEccCCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS--NG--KKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~--~g--~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
.++.+.+.+..++. + +++++++|+.++.+++...+++. +| .++.+|.||+|+|. .|+...
T Consensus 215 ~~~~~~l~~~l~~~-V--~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~--~p~~~~ 278 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-F--YFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR--KANVDK 278 (492)
T ss_dssp HHHHHHHHHHHHTT-S--EEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC--EESCSS
T ss_pred HHHHHHHHHHHhhC-c--EEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC--ccCCCC
Confidence 45666676666654 6 58899999999987667777775 56 57899999999998 666543
No 197
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.64 E-value=2.1e-07 Score=91.07 Aligned_cols=102 Identities=17% Similarity=0.253 Sum_probs=84.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .+ .
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------------------------------------~~--~ 231 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR------------------------------------NF--D 231 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------TS--C
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc------------------------------------cc--C
Confidence 357899999999999999999999999999998764310 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+.+++.++ +++++++|++++.+++.+.|++.+|+++.+|.||+|+|. .|+..
T Consensus 232 ~~~~~~l~~~l~~~Gv--~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~--~p~~~ 291 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGI--SIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR--VPNTT 291 (484)
T ss_dssp HHHHHHHHHHHHHHTC--EEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE--EECCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC--CcCCC
Confidence 4567777777888888 589999999999877778899999888999999999998 55544
No 198
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.63 E-value=2.9e-07 Score=89.75 Aligned_cols=99 Identities=8% Similarity=0.126 Sum_probs=81.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~-------~~ 215 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--------------------------------R-------ED 215 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------T-------SC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--------------------------------C-------CC
Confidence 35789999999999999999999999999999876430 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.|+ +++++++|++++.+++.+.+.+++ .++.+|.||+|+|. .|+.
T Consensus 216 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~v~~~~-~~i~aD~Vv~a~G~--~p~~ 273 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGI--EVLEHTQASQVAHMDGEFVLTTTH-GELRADKLLVATGR--TPNT 273 (467)
T ss_dssp HHHHHHHHHHHHHTTC--EEETTCCEEEEEEETTEEEEEETT-EEEEESEEEECSCE--EESC
T ss_pred HHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeCCEEEEEECC-cEEEcCEEEECCCC--CcCC
Confidence 5677888888888888 589999999999877778888764 57999999999998 5554
No 199
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.63 E-value=1e-07 Score=91.30 Aligned_cols=101 Identities=20% Similarity=0.260 Sum_probs=82.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ..-..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------------~~~~~ 185 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-------------------------------------RVLGR 185 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-------------------------------------HHHCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-------------------------------------hhcCH
Confidence 57899999999999999999999999999998764310 00025
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ +++++++|.+++.++....|++.+|+++.+|.||+|+|. .|+.
T Consensus 186 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~--~p~~ 243 (410)
T 3ef6_A 186 RIGAWLRGLLTELGV--QVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA--EPAD 243 (410)
T ss_dssp HHHHHHHHHHHHHTC--EEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHCCC--EEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC--eecH
Confidence 667788888888888 589999999998766556788889989999999999998 5553
No 200
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.63 E-value=3e-08 Score=92.90 Aligned_cols=45 Identities=20% Similarity=0.372 Sum_probs=41.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC-CCCCCcccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME-SDLGGVWNSQ 49 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~-~~~Gg~~~~~ 49 (433)
...+||+|||||++||++|..|++.|++|+|+|++ +.+||.|...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 35689999999999999999999999999999999 9999987643
No 201
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.63 E-value=2.6e-07 Score=88.37 Aligned_cols=97 Identities=23% Similarity=0.364 Sum_probs=79.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~-~~~~ 187 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------------------------------R-AAPA 187 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------T-TSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------------c-ccCH
Confidence 57899999999999999999999999999998765410 0 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ +++++++|++++ ++ .|++.+|.++.+|.||+|+|. .|+.
T Consensus 188 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~--~p~~ 241 (408)
T 2gqw_A 188 TLADFVARYHAAQGV--DLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGV--LAND 241 (408)
T ss_dssp HHHHHHHHHHHHTTC--EEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHcCc--EEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCC--CccH
Confidence 567788888888898 589999999998 34 677888888999999999998 5543
No 202
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.62 E-value=3.9e-07 Score=87.05 Aligned_cols=101 Identities=15% Similarity=0.255 Sum_probs=82.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~-------------------------------------~~~~~ 184 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA-------------------------------------RVVTP 184 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------------TTSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh-------------------------------------hccCH
Confidence 46899999999999999999999999999998764310 01135
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ +++++++|++++.+++. ..|++.+|+++.+|.||+|+|. .|+.
T Consensus 185 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~--~p~~ 243 (404)
T 3fg2_P 185 EISSYFHDRHSGAGI--RMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV--IPNV 243 (404)
T ss_dssp HHHHHHHHHHHHTTC--EEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE--EECC
T ss_pred HHHHHHHHHHHhCCc--EEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC--ccCH
Confidence 677888888888898 58999999999887554 4588889989999999999998 5543
No 203
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=1.8e-07 Score=91.27 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=81.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--------------------------------------~~~ 217 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP--------------------------------------TMD 217 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------------------------TSC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--------------------------------------ccc
Confidence 357899999999999999999999999999998765410 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cC--cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NG--KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g--~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|.+++.+++...+++. +| .++.+|.||+|+|. .|+..
T Consensus 218 ~~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p~~~ 282 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGM--KFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR--TPFTS 282 (470)
T ss_dssp HHHHHHHHHHHHHSSC--CEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCE--EECCT
T ss_pred HHHHHHHHHHHHHcCC--EEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCC--CcCCC
Confidence 5677888888888888 59999999999876555666664 34 57899999999998 55543
No 204
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.61 E-value=4.4e-07 Score=88.65 Aligned_cols=102 Identities=17% Similarity=0.187 Sum_probs=82.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~ 220 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP--------------------------------------AVD 220 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------------------------TSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc--------------------------------------ccC
Confidence 457899999999999999999999999999998765410 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC---cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG---KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g---~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.+++...+++.++ ..+.+|.||+|+|. .|+..
T Consensus 221 ~~~~~~l~~~l~~~Gv--~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~--~p~~~ 283 (476)
T 3lad_A 221 EQVAKEAQKILTKQGL--KILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR--RPVTT 283 (476)
T ss_dssp HHHHHHHHHHHHHTTE--EEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE--EECCT
T ss_pred HHHHHHHHHHHHhCCC--EEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC--cccCC
Confidence 5677778888888888 5889999999998777777877654 56899999999998 66554
No 205
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.60 E-value=3.4e-07 Score=91.50 Aligned_cols=100 Identities=18% Similarity=0.259 Sum_probs=82.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~~ 192 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT--------------------------------------PVDR 192 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT--------------------------------------TSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch--------------------------------------hcCH
Confidence 46899999999999999999999999999998764310 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-------------------CCeEEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-------------------EDIWEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-------------------~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
++.+.+.+..++.++ +++++++|.+++.+ ++...+.+.+|+++.+|.||+|+|. .|+
T Consensus 193 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~--~p~ 268 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGV--DLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV--RPE 268 (565)
T ss_dssp HHHHHHHHHHHHTTC--EEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE--EEC
T ss_pred HHHHHHHHHHHHCCC--EEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC--ccc
Confidence 667778888888888 58999999999873 5677888888888999999999998 554
Q ss_pred C
Q psy2398 148 Y 148 (433)
Q Consensus 148 ~ 148 (433)
.
T Consensus 269 ~ 269 (565)
T 3ntd_A 269 T 269 (565)
T ss_dssp C
T ss_pred h
Confidence 3
No 206
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.60 E-value=3.8e-07 Score=88.44 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=80.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . .-..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~-~~~~ 191 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY------------------------------------K-YFDK 191 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT------------------------------------T-TSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh------------------------------------h-hhhh
Confidence 47899999999999999999999999999998764310 0 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
++.+.+.+..++.++ +++++++|++++.+++.......++.++.+|.||+|+|. .|+.+
T Consensus 192 ~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~--~p~~~ 250 (452)
T 2cdu_A 192 EFTDILAKDYEAHGV--NLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGF--RPNTE 250 (452)
T ss_dssp HHHHHHHHHHHHTTC--EEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCE--EECCG
T ss_pred hHHHHHHHHHHHCCC--EEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCC--CCCHH
Confidence 677788888888898 599999999998756655433346778999999999998 55543
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.59 E-value=3.5e-07 Score=88.06 Aligned_cols=100 Identities=16% Similarity=0.247 Sum_probs=80.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------~-~~~~ 191 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE------------------------------------R-VTAP 191 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------------------------T-TSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------------c-hhhH
Confidence 57899999999999999999999999999998764310 0 0124
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEE--eCCe-EEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQ--YEDI-WEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~--~~~~-~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
++.+.+.+..++.|+ +++++++|++++. +++. ..|++.+|.++.+|.||+|+|. .|+
T Consensus 192 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~--~p~ 251 (431)
T 1q1r_A 192 PVSAFYEHLHREAGV--DIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL--IPN 251 (431)
T ss_dssp HHHHHHHHHHHHHTC--EEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE--EEC
T ss_pred HHHHHHHHHHHhCCe--EEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC--CcC
Confidence 567777888888888 5899999999987 4333 4788888888999999999998 554
No 208
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.59 E-value=4.4e-07 Score=90.93 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeE-EEEE---ccCc--EEEeCEEEEccCCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIW-EVEL---SNGK--KKKYDFIAVCNGAQRV 145 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~-~v~~---~~g~--~~~~d~vIvAtG~~s~ 145 (433)
...+...+.+.+.+.++ +++.++.|+.+..+++.. -|.. .+|+ .+.++.||+|||.++.
T Consensus 154 G~~l~~~L~~~~~~~gv--~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDT--SYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHHTTSCC--EEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCC--EEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 34677777777777777 689999999998765532 2332 3554 5889999999999764
No 209
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.58 E-value=2.6e-08 Score=98.37 Aligned_cols=43 Identities=21% Similarity=0.516 Sum_probs=38.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCCCCCCccc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMESDLGGVWN 47 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~~~Gg~~~ 47 (433)
+..+||+|||||++||+||..|+++ |.+|+|+|+++.+||...
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 3457999999999999999999874 999999999999999764
No 210
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.58 E-value=1.6e-07 Score=96.29 Aligned_cols=39 Identities=33% Similarity=0.598 Sum_probs=36.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCc
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGV 45 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~ 45 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 479999999999999999999999999999999888873
No 211
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.56 E-value=3.3e-07 Score=89.81 Aligned_cols=102 Identities=10% Similarity=0.162 Sum_probs=78.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . .-.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~-~~~ 235 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA------------------------------------G-YYD 235 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------------T-TSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh------------------------------------h-HHH
Confidence 457899999999999999999999999999998765310 0 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ +++++++|++++.++....+.+ ++.++.+|.||+|+|. .|+.+
T Consensus 236 ~~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~--~p~~~ 294 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGI--QLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGF--RPNTT 294 (490)
T ss_dssp HHHHHHHHHHHHTTTC--EEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCE--EECCG
T ss_pred HHHHHHHHHHHHhCCe--EEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCC--CcChH
Confidence 5677788888888888 5999999999986332223555 5678999999999998 56543
No 212
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.56 E-value=2.6e-07 Score=90.33 Aligned_cols=100 Identities=23% Similarity=0.324 Sum_probs=78.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. .-.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~~ 226 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--------------------------------------IYD 226 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--------------------------------------SSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--------------------------------------cCC
Confidence 457999999999999999999999999999998764411 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+.+++.++ +++++++|++++.+++.+.+.+++ .++.+|.||+|+|. .|+.
T Consensus 227 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~v~~v~~~~-~~i~~D~vi~a~G~--~p~~ 284 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHI--EILTNENVKAFKGNERVEAVETDK-GTYKADLVLVSVGV--KPNT 284 (480)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSCCEEEEEESSBEEEEEETT-EEEECSEEEECSCE--EESC
T ss_pred HHHHHHHHHHHHHcCc--EEEcCCEEEEEEcCCcEEEEEECC-CEEEcCEEEECcCC--CcCh
Confidence 5667788888888888 588999999998754444566654 47999999999998 5543
No 213
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.55 E-value=7.1e-07 Score=86.87 Aligned_cols=164 Identities=17% Similarity=0.198 Sum_probs=87.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCC---------
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYP--------- 74 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (433)
..++|+|||+|.+|+.+|..|.+. +.+|+++++.+.+- .....+ +. .....+.....|...+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~--p~~~~~----~~-~~~~~p~~~~~~~~l~~~~~~~~~~ 298 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALK--PADDSP----FV-NEVFAPKFTDLIYSREHAERERLLR 298 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCC--BCCCCH----HH-HGGGSHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCc--CccCCc----cc-hhccChhHHHHHhcCCHHHHHHHHH
Confidence 357899999999999999999998 88999999987530 000000 00 0000000000000000
Q ss_pred --CCCCCCCCCCHHHHHHHHHHHH----H-HcCCCcceEeCcEEEEEEEeCCeEEEEEc---cCcE--EEeCEEEEccCC
Q psy2398 75 --MPDNYPVYPNHSMMLDYLRSYA----K-KFDVYNHSIFNTEVINLEQYEDIWEVELS---NGKK--KKYDFIAVCNGA 142 (433)
Q Consensus 75 --~~~~~~~~~~~~~~~~~l~~~~----~-~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g~~--~~~d~vIvAtG~ 142 (433)
....+ .......+.+...... . ..++ +++++++|+.++.+++.|.|++. +|+. +.+|.||+|||.
T Consensus 299 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 299 EYHNTNY-SVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp HTGGGTS-SCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred HhhccCC-CcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 00000 0011111111111111 1 1355 58889999999988888999887 5553 899999999998
Q ss_pred CCCCC--CCCCCC--CCCCceeccCCCCCCCC-CCCCeEEEEcC
Q psy2398 143 QRVAR--YPNYSG--YFSGEILHSMDYKSPDQ-IRNKRVLVVGA 181 (433)
Q Consensus 143 ~s~p~--~p~i~g--~~~g~~~~~~~~~~~~~-~~~~~v~VvG~ 181 (433)
.|+ .+-+.+ ...|.+.....++.... ....+|.++|.
T Consensus 376 --~p~~~~~~l~~l~~~~g~i~v~~~~~~~~~~~~~~~Ifa~G~ 417 (463)
T 3s5w_A 376 --ERQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIYAQGF 417 (463)
T ss_dssp --ECCC-CTTTGGGGGGBC--CCCTTSBCCBCTTBCSEEEESSC
T ss_pred --CCCCccchhHHHHHHhCCcccCcccccccCCCCCCeEEEcCC
Confidence 555 333333 11144444444443221 12456877775
No 214
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.53 E-value=9.5e-07 Score=86.32 Aligned_cols=102 Identities=13% Similarity=0.024 Sum_probs=80.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------------~~d 227 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR--------------------------------------SFD 227 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------------------------TSC
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc--------------------------------------ccC
Confidence 357899999999999999999999999999998765410 012
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC--eEEEEEcc---C----cEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED--IWEVELSN---G----KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~--~~~v~~~~---g----~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+++.+..++.++ +++++++|++++.+++ ...+.+.+ + .++.+|.||+|+|. .|+..
T Consensus 228 ~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~--~p~~~ 296 (478)
T 3dk9_A 228 SMISTNCTEELENAGV--EVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR--VPNTK 296 (478)
T ss_dssp HHHHHHHHHHHHHTTC--EEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE--EESCT
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc--ccCCC
Confidence 5667788888888888 5899999999987643 36677764 2 56899999999998 66554
No 215
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.52 E-value=7.6e-07 Score=86.62 Aligned_cols=101 Identities=10% Similarity=0.084 Sum_probs=81.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~------------------------------------~--~~ 210 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS------------------------------------R--FD 210 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------T--SC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------c--cC
Confidence 357899999999999999999999999999998764310 0 12
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEE-EccCcEEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVE-LSNGKKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~-~~~g~~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+.+++.++ +++++++|.+++.++ +...|+ +.+|+ +.+|.||+|+|. .|+..
T Consensus 211 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~--~p~~~ 271 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGI--RILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR--MPNTN 271 (463)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE--EESCT
T ss_pred HHHHHHHHHHHHHCCC--EEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc--ccCCC
Confidence 5667788888888888 589999999998864 336788 78887 999999999998 55544
No 216
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.51 E-value=1e-06 Score=86.36 Aligned_cols=101 Identities=20% Similarity=0.172 Sum_probs=80.4
Q ss_pred CCcEEEECCChHHHHHHHHHHh----cCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSE----GNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVY 82 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~----~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
..+|+|||||+.|+.+|..|.+ .|.+|+++++.+...+ ..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~------------------------------------~~ 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG------------------------------------KI 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT------------------------------------TT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc------------------------------------cc
Confidence 4689999999999999999987 4789999997653200 00
Q ss_pred CCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 83 PNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
. ...+.+.+.+..++.++ +++++++|+.++.+++...|++.+|+++.+|.||+|+|. .|+.
T Consensus 224 l-~~~~~~~~~~~l~~~GV--~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~--~pn~ 284 (493)
T 1m6i_A 224 L-PEYLSNWTMEKVRREGV--KVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL--EPNV 284 (493)
T ss_dssp S-CHHHHHHHHHHHHTTTC--EEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE--EECC
T ss_pred C-CHHHHHHHHHHHHhcCC--EEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC--CccH
Confidence 1 14567777888888888 589999999998777777888889888999999999998 5554
No 217
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.48 E-value=1.2e-07 Score=90.43 Aligned_cols=49 Identities=18% Similarity=0.352 Sum_probs=41.6
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCCCCCCcccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~~~Gg~~~~~ 49 (433)
|..+..++||+|||||++||++|..|++. |.+|+|+|+++.+||.+...
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 44334568999999999999999999999 99999999999999987653
No 218
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=4e-07 Score=85.65 Aligned_cols=93 Identities=20% Similarity=0.280 Sum_probs=75.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHHH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSM 87 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+.. -..+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------------~~~~ 184 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG---------------------------------------LDEE 184 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT---------------------------------------CCHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc---------------------------------------CCHH
Confidence 6899999999999999999999999999998765410 1256
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
+.+++.+..++.++ +++++++|++++ .. .+++.+|+ +.+|.||+|+|. .|+.
T Consensus 185 ~~~~l~~~l~~~gV--~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~--~p~~ 236 (367)
T 1xhc_A 185 LSNMIKDMLEETGV--KFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGI--VPNV 236 (367)
T ss_dssp HHHHHHHHHHHTTE--EEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCE--EECC
T ss_pred HHHHHHHHHHHCCC--EEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCC--CcCH
Confidence 77888888888888 588899999887 23 46677777 999999999998 5554
No 219
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.44 E-value=2e-07 Score=89.61 Aligned_cols=48 Identities=31% Similarity=0.607 Sum_probs=41.8
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcC-CCeEEEccCCCCCCcccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGN-INYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~~~Gg~~~~~ 49 (433)
|+ ....+||+|||||++||+||..|++.| .+|+|+|+++.+||.+...
T Consensus 1 M~-~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~ 49 (424)
T 2b9w_A 1 MS-ISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSP 49 (424)
T ss_dssp -C-CCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCC
T ss_pred CC-CCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccccc
Confidence 54 245689999999999999999999999 8999999999999977654
No 220
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.43 E-value=2.3e-06 Score=83.62 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=78.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|++.|.+|+++++...+ . .+ .
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-----~--------------------------------~~--d 226 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-----R--------------------------------GF--D 226 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS-----T--------------------------------TS--C
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC-----c--------------------------------cc--C
Confidence 3568999999999999999999999999999974211 0 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEEccCc-----EEEeCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVELSNGK-----KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~~~g~-----~~~~d~vIvAtG~~s~p~~ 148 (433)
.++.+.+.+..++.++ +++++++|.+++.+ ++...|++.++. ++.+|.||+|+|. .|+.
T Consensus 227 ~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~--~p~~ 291 (483)
T 3dgh_A 227 QQMAELVAASMEERGI--PFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR--KGLV 291 (483)
T ss_dssp HHHHHHHHHHHHHTTC--CEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc--ccCc
Confidence 5677788888888888 59999999999875 345667766543 6899999999998 5554
No 221
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.43 E-value=1.9e-07 Score=90.62 Aligned_cols=43 Identities=19% Similarity=0.160 Sum_probs=40.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
..+||+|||||++||++|..|++.|.+|+|+|+++.+||.+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 4589999999999999999999999999999999999998765
No 222
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.43 E-value=1.1e-06 Score=88.26 Aligned_cols=98 Identities=26% Similarity=0.345 Sum_probs=79.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. . ...
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~--~~~ 228 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------------------------------P--IDY 228 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------T--SCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------------------------------c--CCH
Confidence 47899999999999999999999999999998764310 0 125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ +++++++|++++.+++ .|++.+++++.+|.||+|+|. .|+.
T Consensus 229 ~~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~--~p~~ 284 (588)
T 3ics_A 229 EMAAYVHEHMKNHDV--ELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGV--QPES 284 (588)
T ss_dssp HHHHHHHHHHHHTTC--EEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCE--EECC
T ss_pred HHHHHHHHHHHHcCC--EEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCC--CCCh
Confidence 667778888888888 5889999999976544 467778888999999999998 5543
No 223
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.42 E-value=1.4e-06 Score=80.80 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=75.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+ ....
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~----------------------------------------~~~~ 191 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF----------------------------------------RAHE 191 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC----------------------------------------CSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc----------------------------------------CccH
Confidence 468999999999999999999999999999987533 0113
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cC--cEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
...+.+.+..++.++ +++++++|.+++.+++...|++. +| .++.+|.||+|+|. .|+.
T Consensus 192 ~~~~~l~~~l~~~gv--~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 254 (335)
T 2zbw_A 192 ASVKELMKAHEEGRL--EVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGY--ITKL 254 (335)
T ss_dssp HHHHHHHHHHHTTSS--EEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE--EEEC
T ss_pred HHHHHHHhccccCCe--EEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecC--CCCc
Confidence 445666666677787 58889999999885443355554 55 56899999999998 5543
No 224
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.42 E-value=6.9e-07 Score=86.15 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=76.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+... + ..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~------------------------------------~--d~ 188 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL------------------------------------M--DA 188 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT------------------------------------S--CG
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc------------------------------------c--cc
Confidence 468999999999999999999999999999988754110 0 12
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++.++ .++++++|+.++. . .+++.+++++.+|.|++|+|. .|+.
T Consensus 189 ~~~~~~~~~l~~~gV--~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~--~Pn~ 242 (437)
T 4eqs_A 189 DMNQPILDELDKREI--PYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGT--HPNS 242 (437)
T ss_dssp GGGHHHHHHHHHTTC--CEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCE--EESC
T ss_pred hhHHHHHHHhhccce--EEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEece--ecCc
Confidence 345667777778888 5899999988753 3 477788889999999999998 5653
No 225
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.41 E-value=1.4e-06 Score=81.91 Aligned_cols=107 Identities=14% Similarity=0.184 Sum_probs=76.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. .. + .+...-..
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~---~~--------------------~--------d~~~~~~~ 214 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND---PD--------------------A--------DPSVRLSP 214 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------------------------------CTTSCCH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC---CC--------------------C--------CCCccCCH
Confidence 35899999999999999999999999999998764310 00 0 00111124
Q ss_pred HHHHHHHHHHHHcC-CCcceEeCcEEEEEEEeCCeEEEEEccCcEEE-eCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFD-VYNHSIFNTEVINLEQYEDIWEVELSNGKKKK-YDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~-~d~vIvAtG~~s~p~~ 148 (433)
.+.+.+.+..++.+ + .++.+++|.+++.+++.+.+++.+|+.+. +|.||+|||. .|+.
T Consensus 215 ~~~~~l~~~l~~~g~v--~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~--~~~~ 274 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARI--EMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF--DATK 274 (369)
T ss_dssp HHHHHHHHHHHTTCCE--EEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB--CGGG
T ss_pred HHHHHHHHHHhhCCcE--EEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc--CCcc
Confidence 45566666666665 7 58889999999877777888888887665 5999999998 5554
No 226
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.41 E-value=1.9e-06 Score=79.35 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=74.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+ ....
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~----------------------------------------~~~~ 184 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF----------------------------------------RAEK 184 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC----------------------------------------CCCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc----------------------------------------ccCH
Confidence 468999999999999999999999999999987532 0123
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEcc----C--cEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELSN----G--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~~----g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
.+.+.+.+.+++.++ +++++++|++++.++ ....|++.+ + .++.+|.||+|+|. .|+.
T Consensus 185 ~~~~~l~~~l~~~gv--~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~--~p~~ 249 (320)
T 1trb_A 185 ILIKRLMDKVENGNI--ILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH--SPNT 249 (320)
T ss_dssp HHHHHHHHHHHTSSE--EEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE--EESC
T ss_pred HHHHHHHHhcccCCe--EEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC--CCCh
Confidence 455566666677787 588899999998764 333355543 3 46899999999998 5543
No 227
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.41 E-value=1.9e-06 Score=83.88 Aligned_cols=100 Identities=20% Similarity=0.265 Sum_probs=75.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .+. .
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~~~-d 213 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI------------------------------------TLE-D 213 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------TSC-C
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC------------------------------------CCC-C
Confidence 357899999999999999999999999999998765410 000 1
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC-CeEEEEEc--cCc--EEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE-DIWEVELS--NGK--KKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~-~~~~v~~~--~g~--~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..+ + +++++++|++++.++ +...+++. +|+ ++.+|.||+|+|. .|+..
T Consensus 214 ~~~~~~l~~~l~---v--~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~--~p~~~ 275 (466)
T 3l8k_A 214 QDIVNTLLSILK---L--NIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR--RPVIP 275 (466)
T ss_dssp HHHHHHHHHHHC---C--CEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCE--EECCC
T ss_pred HHHHHHHHhcCE---E--EEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC--Ccccc
Confidence 344444444333 4 588899999998876 77888887 555 7899999999998 66654
No 228
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.38 E-value=3.4e-08 Score=99.60 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhc------CCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG------NINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~------g~~v~v~e~~~~ 41 (433)
.+||+|||||++||+||+.|++. |.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999997 999999999764
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.37 E-value=4.4e-06 Score=81.77 Aligned_cols=101 Identities=11% Similarity=0.126 Sum_probs=78.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+++|||+|+.|+.+|..|++.|.+|+++++...+ . .+ .
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l-----~--------------------------------~~--d 224 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL-----R--------------------------------GF--D 224 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-----T--------------------------------TS--C
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc-----c--------------------------------cC--C
Confidence 3568999999999999999999999999999975311 0 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe-CCeEEEEEcc---Cc--EEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY-EDIWEVELSN---GK--KKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~v~~~~---g~--~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ ++++++.+..++.. ++...+++.+ ++ ++.+|.||+|+|. .|+..
T Consensus 225 ~~~~~~l~~~l~~~gv--~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~--~p~~~ 290 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGT--QFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR--VPETR 290 (488)
T ss_dssp HHHHHHHHHHHHHTTC--EEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE--EESCG
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC--CcccC
Confidence 5677888888888888 58999999999875 4556666654 44 4789999999998 56553
No 230
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.37 E-value=8.2e-06 Score=82.46 Aligned_cols=35 Identities=31% Similarity=0.488 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHH---h-cCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELS---E-GNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~---~-~g~~v~v~e~~~~ 41 (433)
.+||+|||||++||+||..|+ + .|.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 379999999999999999999 6 8999999999874
No 231
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.33 E-value=2.6e-07 Score=91.29 Aligned_cols=42 Identities=24% Similarity=0.381 Sum_probs=38.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcC-CCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGN-INYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~~~Gg~~~ 47 (433)
..+||+|||||++||+||..|++.| .+|+|+|+++.+||.+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 3479999999999999999999999 99999999999999753
No 232
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.33 E-value=4.7e-07 Score=85.49 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=40.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~ 49 (433)
..+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 45799999999999999999999999999999999999988754
No 233
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.32 E-value=1.9e-06 Score=83.50 Aligned_cols=99 Identities=18% Similarity=0.220 Sum_probs=74.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-..
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------~-~~~~ 190 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR------------------------------------R-SFDK 190 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------------T-TSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch------------------------------------h-hcCH
Confidence 46899999999999999999999999999998765410 0 0124
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+.+.+..++. + ++++++.|..++.++ .......++.++.+|.||+|+|. .|+.
T Consensus 191 ~~~~~l~~~l~~~-v--~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~--~p~~ 246 (449)
T 3kd9_A 191 EVTDILEEKLKKH-V--NLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI--KPNI 246 (449)
T ss_dssp HHHHHHHHHHTTT-S--EEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE--EECC
T ss_pred HHHHHHHHHHHhC-c--EEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC--ccCH
Confidence 5666777666665 6 588899999997644 33223446678999999999998 5543
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.29 E-value=3.2e-06 Score=79.25 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=72.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------------~~~ 202 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ----------------------------------------GHG 202 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS----------------------------------------SCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC----------------------------------------CCH
Confidence 4689999999999999999999999999999875430 001
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeE-EEEE--ccC--cEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIW-EVEL--SNG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~-~v~~--~~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
.+.+.+.+..++.++ .++++++|.+++.+++.. .|++ .+| ..+.+|.||+|+|. .|+.
T Consensus 203 ~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 265 (360)
T 3ab1_A 203 KTAHEVERARANGTI--DVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF--KSNL 265 (360)
T ss_dssp HHHHSSHHHHHHTSE--EEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB--CCSC
T ss_pred HHHHHHHHHhhcCce--EEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC--CCCH
Confidence 233445555566677 588899999998875532 3444 366 46899999999997 5543
No 235
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.27 E-value=7e-07 Score=87.27 Aligned_cols=44 Identities=39% Similarity=0.603 Sum_probs=40.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcC-CCeEEEccCCCCCCcccC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGN-INYDLYEMESDLGGVWNS 48 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~~~Gg~~~~ 48 (433)
...+||+|||||++||++|..|++.| .+|+|+|+++.+||.|..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 45689999999999999999999998 799999999999998875
No 236
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.27 E-value=4.7e-07 Score=87.85 Aligned_cols=42 Identities=21% Similarity=0.422 Sum_probs=38.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
..+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 457999999999999999999999999999999999998764
No 237
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.23 E-value=1.1e-06 Score=86.14 Aligned_cols=42 Identities=24% Similarity=0.449 Sum_probs=38.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVW 46 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~ 46 (433)
+..+||+|||||++||+||..|++.|++|+|+|+.+.+||.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 345799999999999999999999999999999999999964
No 238
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.22 E-value=1.9e-05 Score=77.78 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=75.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.+.+++|||+|+.|+.+|..|++.|.+|+++++. .+. . .+ .
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l----~--------------------------------~~--d 249 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL----R--------------------------------GF--D 249 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS----T--------------------------------TS--C
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc----c--------------------------------cC--C
Confidence 3467999999999999999999999999999974 220 0 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeC----CeEEEEE--ccC-c--EEEeCEEEEccCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYE----DIWEVEL--SNG-K--KKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~----~~~~v~~--~~g-~--~~~~d~vIvAtG~~s~p~~p 149 (433)
.++.+.+.+..++.++ ++++++++..+.... +...++. .++ + .+.+|.||+|+|. .|+..
T Consensus 250 ~~~~~~~~~~l~~~GV--~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~--~p~~~ 318 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGI--KFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR--DACTR 318 (519)
T ss_dssp HHHHHHHHHHHHHTTC--EEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE--EESCS
T ss_pred HHHHHHHHHHHHHCCC--EEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC--cccCC
Confidence 5677778888888888 588898888887642 4455543 344 2 4689999999998 66554
No 239
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.20 E-value=9.5e-07 Score=86.29 Aligned_cols=41 Identities=29% Similarity=0.413 Sum_probs=38.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC--CeEEEccCCCCCCcccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMESDLGGVWNS 48 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~~~Gg~~~~ 48 (433)
+||+|||||++||++|++|++.|. +|+|+|+++.+||....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 699999999999999999999999 99999999999987643
No 240
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.19 E-value=1.1e-06 Score=85.97 Aligned_cols=42 Identities=24% Similarity=0.499 Sum_probs=37.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
..+||+|||||++||++|..|++.|++|+|+|+++.+||...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 457999999999999999999999999999999999988543
No 241
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.17 E-value=1.3e-06 Score=85.91 Aligned_cols=43 Identities=26% Similarity=0.470 Sum_probs=39.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
.++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 3579999999999999999999999999999999999997654
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.16 E-value=5e-06 Score=81.44 Aligned_cols=95 Identities=18% Similarity=0.343 Sum_probs=71.9
Q ss_pred CcEEEECCChHHHHHHHHHHhc--------------CCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEG--------------NINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDY 73 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~--------------g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (433)
..++|||||+.|+.+|..|.+. +.+|+++|..+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 3699999999999999988753 36899999887551
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC----cEEEeCEEEEccCC
Q psy2398 74 PMPDNYPVYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG----KKKKYDFIAVCNGA 142 (433)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g----~~~~~d~vIvAtG~ 142 (433)
+.+ ..++.+++.+..++.|+ +++++++|++++.+.........+| +++.||.||.|+|.
T Consensus 268 ------~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 ------NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp ------TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred ------cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 011 26788889999999999 5999999999875322223333444 35899999999998
No 243
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.16 E-value=1.3e-06 Score=82.07 Aligned_cols=41 Identities=24% Similarity=0.311 Sum_probs=38.6
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 69999999999999999999999999999999999998754
No 244
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.16 E-value=2.9e-05 Score=78.04 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=74.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
...+|+|||||+.|+.+|..|++.|.+|+++++. .+. . .+ .
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l----~--------------------------------~~--d 325 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL----R--------------------------------GF--D 325 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS----T--------------------------------TS--C
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc----C--------------------------------cC--C
Confidence 3468999999999999999999999999999986 220 0 01 2
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEe------C---CeEEEE--EccCcEEE--eCEEEEccCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQY------E---DIWEVE--LSNGKKKK--YDFIAVCNGAQRVARY 148 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~------~---~~~~v~--~~~g~~~~--~d~vIvAtG~~s~p~~ 148 (433)
.++.+++.+..++.++ .+++++.+..+... + +...++ ..+|+.+. +|.||+|+|. .|+.
T Consensus 326 ~~~~~~~~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~--~p~~ 397 (598)
T 2x8g_A 326 QQMAEKVGDYMENHGV--KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR--EPQL 397 (598)
T ss_dssp HHHHHHHHHHHHHTTC--EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE--EECG
T ss_pred HHHHHHHHHHHHhCCC--EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC--cccc
Confidence 4566777777778888 58889888888642 1 445454 34665554 9999999998 5554
No 245
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.16 E-value=4e-06 Score=75.82 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhcc-CCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHH-SEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~-~~~V~~~~r~~~ 207 (433)
..|+|||+|.+|+.+|..|++. +.+|+++.+.+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 3799999999999999999997 999999998763
No 246
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.15 E-value=1.7e-06 Score=85.08 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=39.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
..++||+|||||++||++|..|++.|.+|+|+|+++.+||.+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 3468999999999999999999999999999999999999753
No 247
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.14 E-value=1.3e-05 Score=73.82 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. . ..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------------------------------~-~~ 191 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR---------------------------------------A-NK 191 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC---------------------------------------S-CH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC---------------------------------------c-ch
Confidence 3689999999999999999999999999999875330 0 01
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEc---cCc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELS---NGK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~---~g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
. +.+.+.+..++ +++++++|+++..++....|.+. +|+ ++.+|.||+|+|. .|+.
T Consensus 192 ~---~~~~l~~~~gv--~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 251 (325)
T 2q7v_A 192 V---AQARAFANPKM--KFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH--VPNT 251 (325)
T ss_dssp H---HHHHHHTCTTE--EEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCE--EESC
T ss_pred H---HHHHHHhcCCc--eEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC--CCCh
Confidence 1 12222233466 58889999999875443345554 454 6899999999998 5554
No 248
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.13 E-value=8.8e-06 Score=75.32 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=69.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~----------------------------------------~~~ 212 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR----------------------------------------AST 212 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------------SCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC----------------------------------------CCH
Confidence 4689999999999999999999999999999876430 011
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC-eEEEEEcc-----CcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED-IWEVELSN-----GKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~-~~~v~~~~-----g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.+.+.+.+..++ .++++++|.+++.+++ ...|++.+ +.++.+|.||+|+|. .|+.
T Consensus 213 ---~~~~~l~~~~gv--~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 273 (338)
T 3itj_A 213 ---IMQKRAEKNEKI--EILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH--TPAT 273 (338)
T ss_dssp ---HHHHHHHHCTTE--EEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE--EECC
T ss_pred ---HHHHHHHhcCCe--EEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC--CCCh
Confidence 122222333476 5888999999988654 33366554 356899999999998 5543
No 249
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.13 E-value=1.8e-06 Score=81.73 Aligned_cols=41 Identities=27% Similarity=0.457 Sum_probs=38.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNS 48 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~ 48 (433)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 79999999999999999999999999999999999998764
No 250
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.12 E-value=8.9e-06 Score=74.46 Aligned_cols=95 Identities=9% Similarity=0.039 Sum_probs=68.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------------~~~ 182 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----------------------------------------CAP 182 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----------------------------------------SCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----------------------------------------CCH
Confidence 4789999999999999999999999999999875330 001
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeE-EEEEc---cCc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIW-EVELS---NGK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~-~v~~~---~g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
.+ .+.+.++.++ ++++++++.+++.+++.. .+.+. +|+ ++.+|.||+|+|. .|+.
T Consensus 183 ~~---~~~l~~~~gv--~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 243 (311)
T 2q0l_A 183 IT---LEHAKNNDKI--EFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY--DVNN 243 (311)
T ss_dssp HH---HHHHHTCTTE--EEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE--EECC
T ss_pred HH---HHHHhhCCCe--EEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC--ccCh
Confidence 11 2222223466 578899999998764432 45554 454 6899999999998 5553
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.12 E-value=1.2e-05 Score=73.76 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=70.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------------~~~ 193 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK----------------------------------------AQP 193 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC----------------------------------------SCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC----------------------------------------cCH
Confidence 4689999999999999999999999999999876430 011
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc---Cc--EEEeCEEEEccCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN---GK--KKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~---g~--~~~~d~vIvAtG~~s~p~ 147 (433)
++++...+..++ +++++++|.+++.++....|++.+ |+ .+.+|.||+|+|. .|+
T Consensus 194 ---~~~~~~~~~~gv--~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p~ 252 (323)
T 3f8d_A 194 ---IYVETVKKKPNV--EFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF--DPP 252 (323)
T ss_dssp ---HHHHHHHTCTTE--EEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE--ECC
T ss_pred ---HHHHHHHhCCCc--EEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECC--CCC
Confidence 223333444466 588899999998865555566654 65 6899999999998 554
No 252
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.11 E-value=1.9e-06 Score=84.64 Aligned_cols=39 Identities=28% Similarity=0.460 Sum_probs=36.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcc
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVW 46 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~ 46 (433)
+||+|||||++||+||..|++.|++|+|+|+++.+||..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 799999999999999999999999999999999998754
No 253
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.09 E-value=5e-06 Score=79.96 Aligned_cols=105 Identities=21% Similarity=0.190 Sum_probs=66.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhccC--CcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHS--EKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDG 251 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 251 (433)
|+|+|||+|..|+.+|..|.+.+ .+|+++.+++.+..... +|. ...+..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~------------l~~-----------------v~~g~~ 53 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA------------FPH-----------------LAMGWR 53 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG------------HHH-----------------HHHTCS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCcc------------HHH-----------------HhcCCC
Confidence 68999999999999999999864 68999999886432210 000 000000
Q ss_pred CcCCCCCCCCCCCCCCCccChhhhhcccCCCeee-cCCceeee--CCeEEecCCceeeccEEEEccCCCCCCC
Q psy2398 252 VDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP-KDDIKNLN--GNIVHFVDDTHIEVDTIIYATGYNRHFP 321 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~v~~~~--~~~v~~~dG~~~~~D~vi~atG~~~~~~ 321 (433)
....+ ...+.+.+...+++. ...++.++ .+.|++++|+++++|.+|+|||.++.++
T Consensus 54 ~~~~i--------------~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~~~ 112 (430)
T 3hyw_A 54 KFEDI--------------SVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp CGGGS--------------EEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred CHHHh--------------hhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCccCC
Confidence 00000 001111222225553 45677775 5789999999999999999999876543
No 254
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.08 E-value=2.1e-05 Score=72.31 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=68.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~----------------------------------------~~~ 194 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM----------------------------------------CEN 194 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC----------------------------------------SCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC----------------------------------------CCH
Confidence 3689999999999999999999999999999865330 012
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC-eEEEEEc---cCc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED-IWEVELS---NGK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~-~~~v~~~---~g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
. +.+.+.+.++ +++++++|+++..+++ ...+.+. +|+ ++.+|.||+|+|. .|+.
T Consensus 195 ~----l~~~l~~~gv--~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 254 (319)
T 3cty_A 195 A----YVQEIKKRNI--PYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL--IPQT 254 (319)
T ss_dssp H----HHHHHHHTTC--CEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE--EECC
T ss_pred H----HHHHHhcCCc--EEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC--ccCh
Confidence 2 2233345677 5889999999987644 2234443 454 5899999999998 5543
No 255
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.07 E-value=2.2e-05 Score=71.80 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=67.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.+.+|+++++.+.+. + .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------------------------~--~- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--------------------------------------A--D- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------------------------S--C-
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------------------------c--c-
Confidence 4689999999999999999999999999999875430 0 0
Q ss_pred HHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCeE-EEEEcc---Cc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDIW-EVELSN---GK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~-~v~~~~---g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
+.+.+...+ .++ +++++++|+++..+++.. .+.+.+ |+ ++.+|.||+|+|. .|+.
T Consensus 183 ---~~~~~~l~~~~gv--~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 244 (310)
T 1fl2_A 183 ---QVLQDKLRSLKNV--DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL--LPNT 244 (310)
T ss_dssp ---HHHHHHHHTCTTE--EEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE--EESC
T ss_pred ---HHHHHHHhhCCCe--EEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC--ccCc
Confidence 122233333 466 588899999998764432 344432 43 5889999999998 5543
No 256
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.06 E-value=1.7e-06 Score=81.81 Aligned_cols=88 Identities=16% Similarity=0.153 Sum_probs=68.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+.. . .-..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~------------------------------------~-~~~~ 188 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE------------------------------------R-QLDR 188 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT------------------------------------T-TSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch------------------------------------h-hcCH
Confidence 36899999999999999999999999999999865410 0 0125
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
++.+++.+..++.++ +++++++|.++ +.++.+|.||+|+|. .|+.
T Consensus 189 ~~~~~~~~~l~~~gV--~~~~~~~v~~i-------------g~~~~~D~vv~a~G~--~p~~ 233 (385)
T 3klj_A 189 DGGLFLKDKLDRLGI--KIYTNSNFEEM-------------GDLIRSSCVITAVGV--KPNL 233 (385)
T ss_dssp HHHHHHHHHHHTTTC--EEECSCCGGGC-------------HHHHHHSEEEECCCE--EECC
T ss_pred HHHHHHHHHHHhCCC--EEEeCCEEEEc-------------CeEEecCeEEECcCc--ccCh
Confidence 667778888888888 57878777655 356889999999998 5553
No 257
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.06 E-value=3.9e-06 Score=80.73 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=40.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~ 49 (433)
..+||+|||||++|+++|..|++.|.+|+++|+++.+||.+...
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 45899999999999999999999999999999999999987654
No 258
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.06 E-value=3.9e-06 Score=78.77 Aligned_cols=36 Identities=11% Similarity=0.318 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++||+|||||++|+++|++|++.|.+|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456899999999999999999999999999999875
No 259
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.03 E-value=1.4e-05 Score=73.18 Aligned_cols=95 Identities=15% Similarity=0.102 Sum_probs=70.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+ ....
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~----------------------------------------~~~~ 186 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF----------------------------------------RAAP 186 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC----------------------------------------BSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC----------------------------------------CCCH
Confidence 468999999999999999999999999999987543 0001
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEc--cCc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELS--NGK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~--~g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
++++...++.++ +++++++|.+++.+++. ..+++. +|+ ++.+|.||+|+|. .|+.
T Consensus 187 ---~~~~~~~~~~gv--~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~--~p~~ 246 (315)
T 3r9u_A 187 ---STVEKVKKNEKI--ELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL--NVRN 246 (315)
T ss_dssp ---HHHHHHHHCTTE--EEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE--EECC
T ss_pred ---HHHHHHHhcCCe--EEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC--CCCc
Confidence 233344456676 58889999999887533 234444 665 6899999999998 5543
No 260
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.00 E-value=3e-06 Score=81.53 Aligned_cols=34 Identities=24% Similarity=0.510 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999876
No 261
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.99 E-value=2.1e-05 Score=71.28 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=67.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.| +|+++++.+..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~-------------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE-------------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------------------------------------
Confidence 468999999999999999999999 99999876420
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~ 148 (433)
+.+.+.+..++.++ .++ .++|.+++. +. .|++.+++++.+|.||+|+|. .|+.
T Consensus 176 -~~~~~~~~l~~~gv--~i~-~~~v~~i~~--~~-~v~~~~g~~~~~D~vi~a~G~--~p~~ 228 (297)
T 3fbs_A 176 -PDADQHALLAARGV--RVE-TTRIREIAG--HA-DVVLADGRSIALAGLFTQPKL--RITV 228 (297)
T ss_dssp -CCHHHHHHHHHTTC--EEE-CSCEEEEET--TE-EEEETTSCEEEESEEEECCEE--ECCC
T ss_pred -CCHHHHHHHHHCCc--EEE-cceeeeeec--CC-eEEeCCCCEEEEEEEEEccCc--ccCc
Confidence 01234455666777 365 478888864 22 788888888999999999998 5544
No 262
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.99 E-value=1.8e-05 Score=73.19 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+. . ..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~---------------------------------------~-~~ 198 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR---------------------------------------A-SK 198 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC---------------------------------------S-CH
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC---------------------------------------c-cH
Confidence 4689999999999999999999999999999875430 0 01
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCC--e-EEEEEc---cC--cEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYED--I-WEVELS---NG--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~--~-~~v~~~---~g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
.+ .+...++.++ +++++++|.+++.+++ . ..+.+. +| .++.+|.||+|+|. .|+.
T Consensus 199 ~~---~~~~~~~~gv--~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~ 261 (333)
T 1vdc_A 199 IM---QQRALSNPKI--DVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH--EPAT 261 (333)
T ss_dssp HH---HHHHHTCTTE--EEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE--EESC
T ss_pred HH---HHHHHhCCCe--eEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC--ccch
Confidence 11 1233344566 5788999999987642 2 234443 34 46899999999998 5554
No 263
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.97 E-value=5.8e-06 Score=79.66 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=40.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~ 49 (433)
..+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+...
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~ 62 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASL 62 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcccc
Confidence 45899999999999999999999999999999999999987654
No 264
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.96 E-value=9.8e-06 Score=77.16 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhccC--CcEEEEEecCceeecccCCCCChhHHhHh-h-chhhcCchHHHHHHHHHHHHh
Q psy2398 172 RNKRVLVVGAGNSGCDIAVDASHHS--EKVYHSTRRGYHYYPKFIDGKPTPQWMLQ-L-GNKFSSKEETMAYIKQVFKLA 247 (433)
Q Consensus 172 ~~~~v~VvG~G~sg~d~a~~l~~~~--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~-~-p~~~~~~~~~~~~~~~~~~~~ 247 (433)
.||+|+|||+|..|+-+|..|.+.+ .+|+++.+++.+.... ....+... . +..+..
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p-----~~~~v~~g~~~~~~~~~--------------- 60 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY-----MSNEVIGGDRELASLRV--------------- 60 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST-----THHHHHHTSSCGGGGEE---------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc-----CHHHHhcCCCCHHHHhh---------------
Confidence 3899999999999999999998764 4799998876532210 00000000 0 000000
Q ss_pred cCCCCcCCCCCCCCCCCCCCCccChhhhhcccCCCee-ecCCceeee--CCeEEecCCceeeccEEEEccCCCCCCCCC
Q psy2398 248 GFDGVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDIL-PKDDIKNLN--GNIVHFVDDTHIEVDTIIYATGYNRHFPFI 323 (433)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~v~~~~--~~~v~~~dG~~~~~D~vi~atG~~~~~~~l 323 (433)
....+. .. .++ +...+..++ .+.+.+.+|.++.+|.+|+|||.+++.+-+
T Consensus 61 ----------------------~~~~~~---~~-gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 61 ----------------------GYDGLR---AH-GIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ----------------------CSHHHH---HT-TCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred ----------------------CHHHHH---HC-CCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccCCc
Confidence 001111 11 344 345677775 467889999999999999999999875543
No 265
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.96 E-value=6.3e-06 Score=80.31 Aligned_cols=43 Identities=26% Similarity=0.482 Sum_probs=38.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCCCCCCcccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMESDLGGVWNS 48 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~~~Gg~~~~ 48 (433)
..+||+|||||++|+++|..|.+.|+ +|+|+|+++.+||.+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 45899999999999999999999999 89999999999987654
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.95 E-value=3.1e-05 Score=71.40 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.+.+|+++++.+.+. ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~----------------------------------------~~~ 193 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR----------------------------------------AHE 193 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS----------------------------------------SCH
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC----------------------------------------ccH
Confidence 4689999999999999999999999999999875430 001
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEcc-----CcEEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSN-----GKKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~-----g~~~~~d~vIvAtG~~s~p~~ 148 (433)
.. + ..+++.++ .++.+++|.++..+++...|++.+ +.++.+|.||+|+|. .|+.
T Consensus 194 ~~---~-~~l~~~gv--~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p~~ 252 (332)
T 3lzw_A 194 HS---V-ENLHASKV--NVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF--VSSL 252 (332)
T ss_dssp HH---H-HHHHHSSC--EEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE--ECCC
T ss_pred HH---H-HHHhcCCe--EEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc--CCCc
Confidence 11 1 22456677 588899999998765544565554 346899999999998 5543
No 267
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.94 E-value=3.8e-05 Score=74.49 Aligned_cols=84 Identities=12% Similarity=0.258 Sum_probs=62.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
.++|+|||+|.+|+.+|..|++.|.+|+++++++.+- .. . ++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~---~~-----------------------------~---~~--- 238 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY-----------------------------K---WP--- 238 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC---CC-----------------------------C---CC---
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC---CC-----------------------------C---CC---
Confidence 4789999999999999999999999999999876430 00 0 00
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~~p~ 150 (433)
..+.+...|.+++ ++ .|++.+|+++.+|.||+|||. .|+.|-
T Consensus 239 ----------------~~V~~~~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~--~p~~~~ 280 (464)
T 2xve_A 239 ----------------ENWDERPNLVRVD--TE--NAYFADGSSEKVDAIILCTGY--IHHFPF 280 (464)
T ss_dssp ----------------TTEEECSCEEEEC--SS--EEEETTSCEEECSEEEECCCB--CCCCTT
T ss_pred ----------------CceEEcCCeEEEe--CC--EEEECCCCEEeCCEEEECCCC--CCCCCC
Confidence 1234446777764 23 477788888999999999998 666553
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.92 E-value=1.2e-05 Score=74.43 Aligned_cols=96 Identities=16% Similarity=0.196 Sum_probs=67.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. . . .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----~-----------------------------------~-~ 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----A-----------------------------------S-K 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----S-----------------------------------C-T
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----c-----------------------------------c-H
Confidence 4789999999999999999999999999999875430 0 0 0
Q ss_pred HHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCe--EEEEE-ccC--cEEEeCEEEEccCCCCCCCCC
Q psy2398 87 MMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDI--WEVEL-SNG--KKKKYDFIAVCNGAQRVARYP 149 (433)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~--~~v~~-~~g--~~~~~d~vIvAtG~~s~p~~p 149 (433)
.+ .....++.++ +++++++|++++.+++. ..+.. .+| .++.+|.||+|+|. .|+.+
T Consensus 195 ~~---~~~~~~~~gV--~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~--~p~~~ 255 (335)
T 2a87_A 195 IM---LDRARNNDKI--RFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGH--EPRSG 255 (335)
T ss_dssp TH---HHHHHHCTTE--EEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCE--EECCT
T ss_pred HH---HHHHhccCCc--EEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCC--ccChh
Confidence 01 1123344566 58889999999875432 33332 133 46899999999998 55543
No 269
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.89 E-value=1.6e-05 Score=76.55 Aligned_cols=108 Identities=16% Similarity=0.217 Sum_probs=66.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhc---cCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASH---HSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFD 250 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~---~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 250 (433)
++|+|||+|.+|+.+|..|.+ .+.+|+++.+++.+..... ...+.. .. ... + .+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~-----~~~~~~---g~-~~~-------~----~~--- 61 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPS-----NPWVGV---GW-KER-------D----DI--- 61 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGG-----HHHHHH---TS-SCH-------H----HH---
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCC-----cccccc---Cc-cCH-------H----HH---
Confidence 689999999999999999999 6889999999875422210 000000 00 000 0 00
Q ss_pred CCcCCCCCCCCCCCCCCCccChhhhhcccCCCeee-cCCceeeeC--CeEEecCCceeeccEEEEccCCCCCCCCCC
Q psy2398 251 GVDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP-KDDIKNLNG--NIVHFVDDTHIEVDTIIYATGYNRHFPFID 324 (433)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~v~~~~~--~~v~~~dG~~~~~D~vi~atG~~~~~~~l~ 324 (433)
...+.+.+....+++ ...+..++. ..|.+++|+++.+|.+|+|||.+++.+-++
T Consensus 62 --------------------~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 62 --------------------AFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp --------------------EEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGGST
T ss_pred --------------------HHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcccCC
Confidence 000111111123332 345666653 578899999999999999999998765443
No 270
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.87 E-value=1.1e-05 Score=81.93 Aligned_cols=42 Identities=31% Similarity=0.455 Sum_probs=38.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
..++|+|||||++|+++|..|.+.|++|+|+|+.+.+||.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 357999999999999999999999999999999999998654
No 271
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.86 E-value=1.2e-05 Score=70.34 Aligned_cols=176 Identities=15% Similarity=0.104 Sum_probs=96.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCCCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDGVD 253 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (433)
..|+|||+|.+|+++|..|++.+.+|+++.++.... |.+.. ..++..... .+.+ .+. + .
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~------G~~~~---~~~~~~~~~-----~~~~----~~~-d--~ 62 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV------MMPFL---PPKPPFPPG-----SLLE----RAY-D--P 62 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT------TCCSS---CCCSCCCTT-----CHHH----HHC-C--T
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC------CcccC---ccccccchh-----hHHh----hhc-c--C
Confidence 369999999999999999999999999999873211 00000 000000000 0000 000 0 0
Q ss_pred CCCCCCCCCCCCCCCccChhhhhcccC-CCeee-cCCceeee--CC---eEEecCCceeeccEEEEccCCCCCCCCCC--
Q psy2398 254 YGLKKPDHPLDAAHPIMNSQILYHIGH-GDILP-KDDIKNLN--GN---IVHFVDDTHIEVDTIIYATGYNRHFPFID-- 324 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~-~~~v~~~~--~~---~v~~~dG~~~~~D~vi~atG~~~~~~~l~-- 324 (433)
.+ | .+..+...+.+.+.. +.+++ ...++++. +. .|.+.+|.++++|.||+|||...+...+.
T Consensus 63 ~g---~------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 63 KD---E------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp TC---C------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred CC---C------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 00 0 000111222222332 24443 34566553 22 46678898899999999999965422110
Q ss_pred ---------------------ccccccc---------CCccc-------cc------cccccCCCCcEEEEccccccCCh
Q psy2398 325 ---------------------KEKLEWK---------LGIPD-------LF------IHIAPRNLDNIFFFGFVNAAAGL 361 (433)
Q Consensus 325 ---------------------~~~~~~~---------~~~~~-------~~------~~~~~~~~p~i~~iG~~~~~~~~ 361 (433)
...+... .+.|. +. ..+..+++|+||++|||+ ..+.
T Consensus 134 ~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~ 212 (232)
T 2cul_A 134 VVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGD 212 (232)
T ss_dssp EEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCC
T ss_pred ccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCcc
Confidence 0000000 00000 00 011225899999999999 6678
Q ss_pred hhHHHHHHHHHHHHHhhhh
Q psy2398 362 GDGLRLQGQFIRSYIQAFI 380 (433)
Q Consensus 362 ~~~a~~qa~~~a~~i~g~~ 380 (433)
+..+..|++.+|.+|..++
T Consensus 213 ~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 213 YARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 8889999999999997654
No 272
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.86 E-value=1.3e-05 Score=82.94 Aligned_cols=42 Identities=31% Similarity=0.455 Sum_probs=38.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCccc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWN 47 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~ 47 (433)
..++|+|||||++||++|..|.+.|++|+|||+.+.+||.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 318 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 318 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCcee
Confidence 357999999999999999999999999999999999998643
No 273
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.86 E-value=4.2e-05 Score=73.93 Aligned_cols=83 Identities=17% Similarity=0.200 Sum_probs=61.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCC-eEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNIN-YDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~-v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.++|+|||+|++|+.+|..|++.+.+ |+++++.+.+ .
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-----l------------------------------------- 249 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-----I------------------------------------- 249 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS-----C-------------------------------------
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc-----C-------------------------------------
Confidence 46899999999999999999999998 9999986532 0
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcE-EEeCEEEEccCCCCCCCCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKK-KKYDFIAVCNGAQRVARYPN 150 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~-~~~d~vIvAtG~~s~p~~p~ 150 (433)
.. ..+..+..|+++..++. .|++.+|+. +.+|.||+|||. .|+.|-
T Consensus 250 -----------~~----~~i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~--~~~~~~ 296 (447)
T 2gv8_A 250 -----------QN----ESLQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGY--LYSVPF 296 (447)
T ss_dssp -----------BC----SSEEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCB--CCCCCC
T ss_pred -----------CC----CCeEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCC--CcCCCC
Confidence 00 12445567777653333 577788876 689999999998 666554
No 274
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.84 E-value=1.2e-05 Score=80.72 Aligned_cols=41 Identities=22% Similarity=0.460 Sum_probs=37.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcc
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVW 46 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~ 46 (433)
..+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35799999999999999999999999999999998888755
No 275
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.80 E-value=2.3e-05 Score=72.57 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=33.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~ 42 (433)
|+||+|||||++|+.+|..|++.|.+|+++|+++..
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 369999999999999999999999999999988744
No 276
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.77 E-value=2.4e-05 Score=79.86 Aligned_cols=98 Identities=11% Similarity=0.099 Sum_probs=71.9
Q ss_pred CCcEEEEC--CChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIG--GGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIG--aG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+|+||| +|+.|+.+|..|.+.|.+|+++++.+.+.....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~------------------------------------- 565 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN------------------------------------- 565 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG-------------------------------------
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc-------------------------------------
Confidence 35799999 999999999999999999999998765421110
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE---ccCcEEEeCEEEEccCCCCCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL---SNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~---~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
.....+.+.+.+++.++ +++.+++|++++. +...+.. .++.++.+|.||+|+|. .|+
T Consensus 566 ~~~~~~~l~~~l~~~GV--~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~--~p~ 625 (690)
T 3k30_A 566 NTFEVNRIQRRLIENGV--ARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTAR--LPR 625 (690)
T ss_dssp GGTCHHHHHHHHHHTTC--EEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCE--EEC
T ss_pred cchhHHHHHHHHHHCCC--EEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCC--CCC
Confidence 01123455666777788 5899999999874 4444443 23457899999999998 554
No 277
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.76 E-value=3.9e-05 Score=73.19 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=32.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhc---cCCcEEEEEecCce
Q psy2398 174 KRVLVVGAGNSGCDIAVDASH---HSEKVYHSTRRGYH 208 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~---~~~~V~~~~r~~~~ 208 (433)
++|+|||+|.+|+.+|..|++ .+.+|+++.+++.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 579999999999999999999 78999999998753
No 278
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.74 E-value=0.00011 Score=72.34 Aligned_cols=94 Identities=18% Similarity=0.255 Sum_probs=67.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHS 86 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.+. . .
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~---------------------------------------~-~- 393 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------------------------------------A-D- 393 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC---------------------------------------S-C-
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC---------------------------------------c-C-
Confidence 4689999999999999999999999999999875430 0 0
Q ss_pred HHHHHHHHHHHH-cCCCcceEeCcEEEEEEEeCCeE-EEEEcc---Cc--EEEeCEEEEccCCCCCCCC
Q psy2398 87 MMLDYLRSYAKK-FDVYNHSIFNTEVINLEQYEDIW-EVELSN---GK--KKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 87 ~~~~~l~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~-~v~~~~---g~--~~~~d~vIvAtG~~s~p~~ 148 (433)
+++.+...+ .++ .+++++.++.+..+++.. .+.+.+ |+ ++.+|.||+|+|. .|+.
T Consensus 394 ---~~l~~~l~~~~gV--~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~--~pn~ 455 (521)
T 1hyu_A 394 ---QVLQDKVRSLKNV--DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL--LPNT 455 (521)
T ss_dssp ---HHHHHHHTTCTTE--EEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE--EESC
T ss_pred ---HHHHHHHhcCCCc--EEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC--CCCc
Confidence 223333333 355 588899999998754433 355442 43 5889999999997 5543
No 279
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.74 E-value=5.3e-05 Score=72.76 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=66.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhc--cCCcEEEEEecCceeecccCCCCChhHHhHhhchhhcCchHHHHHHHHHHHHhcCCC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASH--HSEKVYHSTRRGYHYYPKFIDGKPTPQWMLQLGNKFSSKEETMAYIKQVFKLAGFDG 251 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~--~~~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 251 (433)
++|+|||+|.+|+..|..|++ .+.+|+++.+++.+... +. ++. . ..+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~------~~------~~~----------~-------~~g~~ 53 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT------PA------FPH----------L-------AMGWR 53 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG------GG------HHH----------H-------HHTCS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC------CC------cch----------h-------ccCcc
Confidence 589999999999999999999 67899999998753211 00 000 0 00000
Q ss_pred CcCCCCCCCCCCCCCCCccChhhhhcccCCCeee-cCCceeeeC--CeEEecCCceeeccEEEEccCCCCCCCCC
Q psy2398 252 VDYGLKKPDHPLDAAHPIMNSQILYHIGHGDILP-KDDIKNLNG--NIVHFVDDTHIEVDTIIYATGYNRHFPFI 323 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~v~~~~~--~~v~~~dG~~~~~D~vi~atG~~~~~~~l 323 (433)
... .+...+.+.+....+++ ...+..++. ..|.+++|+++.+|.+|+|||.+++.+-+
T Consensus 54 ~~~--------------~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~ 114 (430)
T 3h28_A 54 KFE--------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAE 114 (430)
T ss_dssp CGG--------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCSB
T ss_pred CHH--------------HHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCCC
Confidence 000 00001111111123443 345666653 46888899999999999999999887744
No 280
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.72 E-value=1.5e-05 Score=74.45 Aligned_cols=33 Identities=18% Similarity=0.460 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcC------CCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN------INYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g------~~v~v~e~~~ 40 (433)
+||+|||||++|+++|++|++.| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 8999999975
No 281
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.63 E-value=0.00018 Score=76.10 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCHHH
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNHSM 87 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (433)
.+|+|||+|+.|+.+|..|++.|.+|+|+|+.+.+ . ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~----------------------------------------~-~~- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI----------------------------------------S-AA- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC----------------------------------------C-HH-
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc----------------------------------------c-hh-
Confidence 68999999999999999999999999999987543 0 01
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEe--CCeEEEEEcc-------C--cEEEeCEEEEccCCCCCCCC
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQY--EDIWEVELSN-------G--KKKKYDFIAVCNGAQRVARY 148 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~--~~~~~v~~~~-------g--~~~~~d~vIvAtG~~s~p~~ 148 (433)
.+.+++.++ .+++++.|+++..+ +....|++.+ | .++.+|.||+|+|. .|+.
T Consensus 323 -----~~~l~~~GV--~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~--~P~~ 385 (965)
T 2gag_A 323 -----AAQAVADGV--QVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF--NPVV 385 (965)
T ss_dssp -----HHHHHHTTC--CEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE--EECC
T ss_pred -----HHHHHhCCe--EEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc--CcCh
Confidence 234566788 59999999999873 3322344432 3 56899999999998 5554
No 282
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.62 E-value=0.00014 Score=66.46 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|+|||+|+.|+.+|..|++.|.+|+++++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999764
No 283
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.55 E-value=9.2e-05 Score=68.85 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|.+|+.+|..|.+.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699998863
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.54 E-value=0.00018 Score=69.51 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCC-eEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNIN-YDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~-v~v~e~~~~ 41 (433)
..++|+|||||..|+.+|..+.+.|.+ |+++++++.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 347899999999999999999999985 999998754
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.48 E-value=0.00013 Score=74.90 Aligned_cols=98 Identities=11% Similarity=0.166 Sum_probs=68.8
Q ss_pred CCcEEEEC--CChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCC
Q psy2398 7 NIKLCIIG--GGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPN 84 (433)
Q Consensus 7 ~~~v~IIG--aG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+|+||| +|..|+.+|..|++.|.+|+++++.+ +..... +..
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~----------------------------------~~~ 572 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH----------------------------------FTL 572 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH----------------------------------HTT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc----------------------------------ccc
Confidence 46899999 99999999999999999999999876 411000 000
Q ss_pred HHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEE--ccC-cE------------------EEeCEEEEccCCC
Q psy2398 85 HSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVEL--SNG-KK------------------KKYDFIAVCNGAQ 143 (433)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~--~~g-~~------------------~~~d~vIvAtG~~ 143 (433)
. .+.+.+..++.++ +++++++|++++. +...+.. .++ .. +.+|.||+|+|.
T Consensus 573 ~---~~~~~~~l~~~GV--~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~- 644 (729)
T 1o94_A 573 E---YPNMMRRLHELHV--EELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR- 644 (729)
T ss_dssp C---HHHHHHHHHHTTC--EEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE-
T ss_pred c---HHHHHHHHHhCCC--EEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC-
Confidence 0 2344555667788 5899999999864 3444443 222 22 899999999998
Q ss_pred CCCCC
Q psy2398 144 RVARY 148 (433)
Q Consensus 144 s~p~~ 148 (433)
.|+.
T Consensus 645 -~p~~ 648 (729)
T 1o94_A 645 -HSEC 648 (729)
T ss_dssp -EECC
T ss_pred -CCCh
Confidence 5543
No 286
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.48 E-value=3.4e-05 Score=77.76 Aligned_cols=36 Identities=33% Similarity=0.597 Sum_probs=33.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcC--------CCeEEEccCC-CC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGN--------INYDLYEMES-DL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g--------~~v~v~e~~~-~~ 42 (433)
+++|+|||||++||++|..|.+.| ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999998 88
No 287
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.47 E-value=0.00018 Score=65.53 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=29.4
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.|+|||+|+.|+..|..+++.+.+|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 59999999999999999999999999998753
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.43 E-value=0.00059 Score=69.40 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=67.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEc--cCCCCCCc--ccCCCCCCccccceEeecCCCcccCCCCCCCCCCC-
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYE--MESDLGGV--WNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYP- 80 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e--~~~~~Gg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (433)
...+|+|||||+.|+.+|..|++.|.+|++.- .....|-. +.........++... .....+.-+... +....
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~~--~~~l~~ 569 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQRK--ASKPGQ 569 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECSS--CSCTTT
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEec--chhhcc
Confidence 34789999999999999999999887765420 00000000 000000000000000 000000000000 00000
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC--cEEEeCEEEEccCCCCCCC
Q psy2398 81 VYPNHSMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG--KKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g--~~~~~d~vIvAtG~~s~p~ 147 (433)
.+. .....++....++.++ +++.+++|+.++ +++..++ .+| .++.+|.||+|+|. .|+
T Consensus 570 ~l~--~~~~~~~~~~l~~~GV--~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~--~p~ 629 (671)
T 1ps9_A 570 GLG--KTTGWIHRTTLLSRGV--KMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQ--EPN 629 (671)
T ss_dssp TSC--TTTHHHHHHHHHHTTC--EEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCE--EEC
T ss_pred ccc--cccHHHHHHHHHhcCC--EEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCc--ccc
Confidence 011 1233455566677788 588899999887 3455554 566 46899999999998 554
No 289
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.40 E-value=0.0019 Score=63.72 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHh-ccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDAS-HHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~-~~~~~V~~~~r~~ 206 (433)
.+|+|||+|.+|+-+|..|. +.|.+|+++.+++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8899999999865
No 290
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.34 E-value=0.00072 Score=61.66 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=32.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~ 42 (433)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 368999999999999999999999999999987643
No 291
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.34 E-value=0.00099 Score=65.87 Aligned_cols=33 Identities=24% Similarity=0.156 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.+|+|||+|.+|+-+|..|.+.+.+|+++.+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999865
No 292
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.30 E-value=0.00084 Score=63.12 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
...|+|||+|.+|+.+|..|++.|.+|+++.+++.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 45899999999999999999999999999998764
No 293
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.29 E-value=0.00092 Score=64.50 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--------------------CC-CeEEEccCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--------------------NI-NYDLYEMESDL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--------------------g~-~v~v~e~~~~~ 42 (433)
..+|+|||+|..|+.+|..|++. |. +|++++++..+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999999874 55 89999987643
No 294
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.28 E-value=0.0013 Score=63.47 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHH--------------------hcCC-CeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELS--------------------EGNI-NYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~--------------------~~g~-~v~v~e~~~~ 41 (433)
..+|+|||+|..|+.+|..|+ +.|. +|+|+++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 478999999999999999999 5687 6999998764
No 295
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.27 E-value=0.0011 Score=65.37 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.+|+|||+|.+|+-+|..|.+.+.+|+++.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 296
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.25 E-value=0.00022 Score=70.68 Aligned_cols=36 Identities=31% Similarity=0.339 Sum_probs=33.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..+|++|||||++|+.+|.+|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999863
No 297
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.23 E-value=0.0026 Score=67.69 Aligned_cols=92 Identities=10% Similarity=-0.023 Sum_probs=62.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCCCCCCcccCCCCCCccccceEeecCCCcccCCCCCCCCCCCCCCCH
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMESDLGGVWNSQASCGRVYPSLHLISPKFNTQVPDYPMPDNYPVYPNH 85 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
..+|+|||||..|+.+|..+.+.|. +|+++++.+.. . .+. ..
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~-----~------------------------------~~~--~~ 374 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFV-----N------------------------------IRA--VP 374 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGG-----G------------------------------CCS--CH
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChh-----h------------------------------CCC--CH
Confidence 3589999999999999999999997 89999987521 0 000 01
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEE-EEEc------c-------C--cEEEeCEEEEccCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWE-VELS------N-------G--KKKKYDFIAVCNGA 142 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~-v~~~------~-------g--~~~~~d~vIvAtG~ 142 (433)
.++ ..+++.|+ .+++++.+.++..+++... |++. + + .++.+|.||+|+|.
T Consensus 375 ~e~-----~~~~~~Gv--~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 375 EEV-----ELAKEEKC--EFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHH-----HHHHHTTC--EEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHH-----HHHHHcCC--EEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 222 23455677 5778888888876544322 2221 1 1 35889999999997
No 298
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.19 E-value=0.00054 Score=64.92 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 45899999999999999999999999999998864
No 299
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.17 E-value=0.00024 Score=69.43 Aligned_cols=35 Identities=34% Similarity=0.420 Sum_probs=32.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
...|+|||+|.+|+.+|..|++.|.+|+++.+++.
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 56899999999999999999999999999998864
No 300
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.17 E-value=0.00044 Score=68.80 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=40.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCCCcccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLGGVWNSQ 49 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~Gg~~~~~ 49 (433)
..+||+|+|+|..|...|..|++.|.+|+++|+++..||.|...
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~ 50 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASF 50 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccc
Confidence 35899999999999999999999999999999999999987654
No 301
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.15 E-value=0.00025 Score=69.93 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-cCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE-GNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e~~~~ 41 (433)
..+|+||||||++|+.+|.+|++ .+++|+|+|+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 35899999999999999999998 5789999998864
No 302
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.0003 Score=67.07 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=31.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4799999999999999999999999999998763
No 303
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.02 E-value=0.00031 Score=69.27 Aligned_cols=35 Identities=31% Similarity=0.360 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~ 42 (433)
.+|++|||||++|+.+|.+|++ |.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4799999999999999999999 9999999998654
No 304
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.01 E-value=0.00043 Score=68.66 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcC-CCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGN-INYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~~ 41 (433)
..+|++|||||.+|+.+|.+|++.+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999987 79999999875
No 305
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.99 E-value=0.00054 Score=67.11 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESDLG 43 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~~G 43 (433)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 45899999999999999999999999999999987543
No 306
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.93 E-value=0.0048 Score=58.33 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
..+|+|||+|.+|+-+|..|++.|.+|+++.|++.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 45899999999999999999999999999999864
No 307
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.92 E-value=0.0026 Score=60.20 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=31.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3799999999999999999999999999998764
No 308
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.84 E-value=0.00072 Score=67.07 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~ 40 (433)
..+|++|||||.+|+.+|.+|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 458999999999999999999975 78999999987
No 309
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.82 E-value=0.0057 Score=59.75 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~~ 41 (433)
..++|+|||+|.+|+.++..|++. +.+|+++-|++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 346899999999999999999875 678999988753
No 310
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.80 E-value=0.0035 Score=61.90 Aligned_cols=33 Identities=33% Similarity=0.273 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|.+.|.+|+++.+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 311
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.79 E-value=0.00099 Score=65.25 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..+|++|||+|++|+.+|..|.+.|.+|+++|++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999998764
No 312
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.77 E-value=0.0025 Score=60.30 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
-+|+|||+|++|+-+|..|++.|-+|+++.|++.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3799999999999999999999999999998764
No 313
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.75 E-value=0.00097 Score=65.58 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.+.|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 4579999999999999999999999999999875
No 314
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.73 E-value=0.0011 Score=66.02 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHh-cCCCeEEEccCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSE-GNINYDLYEMESDL 42 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e~~~~~ 42 (433)
..+|++|||+|++|+.+|.+|.+ .|.+|+++|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45899999999999999999999 79999999987643
No 315
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.73 E-value=0.0011 Score=65.64 Aligned_cols=37 Identities=27% Similarity=0.504 Sum_probs=33.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMESDL 42 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~~~ 42 (433)
..+|++|||+|++|+.+|.+|++. |.+|+++|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999998 8999999998654
No 316
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.64 E-value=0.011 Score=54.20 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 369999999999999999999999999999875
No 317
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.62 E-value=0.002 Score=51.99 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
....+|+|||+|..|..+|..|.+.|.+|+++|+..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345689999999999999999999999999999865
No 318
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.62 E-value=0.0024 Score=50.58 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+.+|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45689999999999999999999999999999864
No 319
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.59 E-value=0.00086 Score=66.33 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHh-cCCCeEEEccCCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSE-GNINYDLYEMESDL 42 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~-~g~~v~v~e~~~~~ 42 (433)
.+|++|||||.+|+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3899999999999999999998 68999999998654
No 320
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.57 E-value=0.0088 Score=56.63 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 172 RNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 172 ~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
+...|+|||+|.+|+-+|..|++.|.+|+++.|.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 345899999999999999999999999999999864
No 321
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.53 E-value=0.0016 Score=61.67 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=30.7
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|.+|+-+|..+++.|.+|+++.+.+.
T Consensus 6 dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 599999999999999999999999999998763
No 322
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.39 E-value=0.0068 Score=60.39 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
-.|+|||+|.+|+.+|..+++.|.+|.++.+++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 379999999999999999999999999999863
No 323
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.32 E-value=0.0054 Score=52.48 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec
Q psy2398 170 QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR 205 (433)
Q Consensus 170 ~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~ 205 (433)
++.+++|+|||+|.+|.--+..|.+.|.+|+++.++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 467999999999999999999999999999998754
No 324
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.23 E-value=0.0045 Score=58.91 Aligned_cols=33 Identities=30% Similarity=0.302 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 379999999999999999999999999999875
No 325
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.12 E-value=0.0075 Score=56.82 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=30.9
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+++.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 599999999999999999999999999998764
No 326
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.05 E-value=0.015 Score=53.48 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=30.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhc---cCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASH---HSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~---~~~~V~~~~r~~ 206 (433)
++|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 899999999874
No 327
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.02 E-value=0.0098 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|...|..|.+.|++|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999865
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.99 E-value=0.0069 Score=47.58 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|+|||+|..|...|..|.+.|.+|+++|+..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999854
No 329
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.95 E-value=0.02 Score=56.98 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
-.|+|||+|.+|+++|..+++.|.+|.++.+++
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 479999999999999999999999999999874
No 330
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=95.94 E-value=0.0095 Score=57.24 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=30.7
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|.+|+-+|..|++.+.+|+++.+.+.
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 699999999999999999999999999998763
No 331
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.92 E-value=0.0085 Score=47.25 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+.+|+|+|+|..|..++..|.+.|.+|+++|+..
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999753
No 332
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.91 E-value=0.0072 Score=45.83 Aligned_cols=35 Identities=14% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcC-CCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGN-INYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~ 40 (433)
.+++|+|+|+|..|..++..|.+.| .+|+++++..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3468999999999999999999999 8999999864
No 333
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.88 E-value=0.015 Score=57.63 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=30.1
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.|+|||+|.+|++.|..+++.|.+|.++.+++
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 69999999999999999999999999999863
No 334
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.76 E-value=0.014 Score=46.75 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEME 39 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~ 39 (433)
..+|+|+|+|..|...+..|.+.|.+|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 368999999999999999999999999999986
No 335
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.73 E-value=0.029 Score=55.87 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
...|+|||||.+|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4689999999999999999999999999999875
No 336
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.68 E-value=0.013 Score=56.30 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=31.0
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 699999999999999999999999999998864
No 337
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.58 E-value=0.012 Score=53.22 Aligned_cols=39 Identities=23% Similarity=0.435 Sum_probs=31.2
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
|+ .+...+|+|||||..|...|..++..|++|+++|..+
T Consensus 1 Ma-~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MA-SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CC-CCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44 3345689999999999999999999999999999764
No 338
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.54 E-value=0.012 Score=53.63 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=30.6
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
|.|+..+.+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5554456799999999999999999999988 899999753
No 339
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.21 E-value=0.02 Score=51.73 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|+|||+|..|...|..|++.|++|+++|+..
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999864
No 340
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.21 E-value=0.017 Score=52.21 Aligned_cols=40 Identities=18% Similarity=0.352 Sum_probs=31.9
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
|++...+++|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5544456789999999999999999999999999999865
No 341
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.20 E-value=0.019 Score=52.21 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+..+|.|||+|.-|...|..|++.|++|+++|+.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345789999999999999999999999999999865
No 342
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.19 E-value=0.038 Score=53.71 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=36.2
Q ss_pred HHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCCCC
Q psy2398 96 AKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRVAR 147 (433)
Q Consensus 96 ~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~p~ 147 (433)
+++.|+ ++++++.|+++..+++...+.+.++.++.+|.||+|+|. .|+
T Consensus 267 l~~~GV--~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~--~p~ 314 (493)
T 1y56_A 267 LERWGI--DYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR--RPD 314 (493)
T ss_dssp HHHHTC--EEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE--EEC
T ss_pred HHhCCc--EEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc--CcC
Confidence 344566 578888888887654445566778888999999999998 444
No 343
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.12 E-value=0.024 Score=51.95 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
..+++|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 344689999999999999999999998 999999864
No 344
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.04 E-value=0.027 Score=46.59 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhc-CCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG-NINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~-g~~v~v~e~~~ 40 (433)
..+|+|||+|..|..+|..|.+. |++|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35899999999999999999999 99999999864
No 345
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.95 E-value=0.023 Score=54.58 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|+|||.|.+|+++|..|.++|++|+++|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34789999999999999999999999999999864
No 346
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.88 E-value=0.013 Score=51.66 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.7
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|++|+-+|..|++.|.+|+++.+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 499999999999999999999999999998753
No 347
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.86 E-value=0.051 Score=52.80 Aligned_cols=56 Identities=11% Similarity=0.039 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcC-CCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 88 MLDYLRSYAKKFD-VYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 88 ~~~~l~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
+.+.+.+.+...+ + +++++++|++|+.+++.+.|++.+|+++.||+||+|+|....
T Consensus 257 l~~~l~~~l~~~g~~--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 257 FARRFWEEAAGTGRL--GYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHTTTCE--EEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHhhhcCce--EEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 3343444444333 3 489999999999887789999988888999999999997543
No 348
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.80 E-value=0.031 Score=50.02 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|+|||+|.-|...|..|++.|++|+++|+..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 349
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.80 E-value=0.033 Score=47.54 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME 39 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~ 39 (433)
..+.|+|||||..|...+..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999974
No 350
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.66 E-value=0.023 Score=54.38 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
.++|+|||.|.+|+++|..|.++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 46899999999999999999999999999998654
No 351
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.61 E-value=0.029 Score=47.95 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|+|||+|..|...|..|.+.|++|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 352
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.58 E-value=0.032 Score=50.87 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|.-|...|..|++.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 353
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.58 E-value=0.036 Score=51.74 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..+|+|||+|..|+.+|..|...|.+|+++|+...
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998753
No 354
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.45 E-value=0.055 Score=48.94 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=33.9
Q ss_pred CCCCC--CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 1 MKYKN--KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 1 M~~~~--~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
|+|.. .+++|.|||.|..|...|..|.+.|++|+++++..
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCCcccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 55532 45789999999999999999999999999999865
No 355
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.44 E-value=0.039 Score=50.21 Aligned_cols=34 Identities=21% Similarity=0.509 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
+++|+|||||..|...|..|++.|+ +|+++|+..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999864
No 356
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.41 E-value=0.032 Score=52.84 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=32.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++.+|+|||.|+.||.+|..|++.|++|+.+|-..
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 356799999999999999999999999999999764
No 357
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.40 E-value=0.045 Score=50.62 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|+|||+|.-|.+.|..|++.|.+|+++++.+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 358
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.28 E-value=0.038 Score=50.19 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999864
No 359
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.28 E-value=0.016 Score=56.44 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
|+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 6899999999999999999999999999998753
No 360
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.24 E-value=0.044 Score=50.94 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
|++|+|||||..|..+++.+++.|++++++|..+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46999999999999999999999999999997664
No 361
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.19 E-value=0.037 Score=44.41 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=32.9
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 165 YKSPDQIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 165 ~~~~~~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
...+....+++|+|+|+|..|.-++..|...+.+|+++.|++
T Consensus 11 ~~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 11 HHMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ------CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 334455568899999999999999999999999999998765
No 362
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.19 E-value=0.038 Score=51.12 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|+.+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 363
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.10 E-value=0.049 Score=49.79 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHH-HHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIG-LGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~-~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4678999999999996 7888999999999999864
No 364
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.09 E-value=0.055 Score=45.89 Aligned_cols=35 Identities=17% Similarity=0.455 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
+++|.|||+|..|.+.|..|.+.|.+|+++++...
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 365
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.06 E-value=0.056 Score=49.58 Aligned_cols=32 Identities=25% Similarity=0.509 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEME 39 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~ 39 (433)
++|+|||+|..|...|..|++.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999974
No 366
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.06 E-value=0.044 Score=49.35 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
+++|.|||.|..|...|..|++.|++|+++|+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998764
No 367
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.05 E-value=0.052 Score=49.22 Aligned_cols=37 Identities=11% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..+++|.|||+|..|...|..|.+.|++|+++++...
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3457899999999999999999999999999998653
No 368
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.02 E-value=0.064 Score=49.18 Aligned_cols=40 Identities=30% Similarity=0.388 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
|+..+...+|.|||.|..|-+.|..|.+.|.+|+++|+.+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5545566789999999999999999999999999999865
No 369
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.00 E-value=0.048 Score=52.19 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|..|+..|..|++.|++|+++|+..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999865
No 370
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.99 E-value=0.036 Score=48.98 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+.+.|+|||||-.|...+..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999753
No 371
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.99 E-value=0.048 Score=49.41 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|..|...|..|.+.|++|+++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999864
No 372
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.95 E-value=0.062 Score=48.94 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
.+.+|+|||||..|..+|..|+..|+ +|+++|...
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 34689999999999999999999998 999999754
No 373
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.90 E-value=0.049 Score=48.96 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|.-|...|..|.+.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999864
No 374
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=93.89 E-value=0.12 Score=45.64 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
+..|++++|||+|. .|.-+|..|...+..||+++++.
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 56799999999997 59999999999999999987654
No 375
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.78 E-value=0.044 Score=48.38 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec
Q psy2398 170 QIRNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR 205 (433)
Q Consensus 170 ~~~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~ 205 (433)
++++++|+|||+|.+|.--+..|.+.|.+|+++...
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 457899999999999999999999999999999864
No 376
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.77 E-value=0.11 Score=45.74 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCCC-HHHHHHHHhcc--CCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGNS-GCDIAVDASHH--SEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~s-g~d~a~~l~~~--~~~V~~~~r~~ 206 (433)
++.|++++|||.|.+ |.-+|..|... +..||+++|+.
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t 194 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT 194 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 567999999999975 99999999999 89999987654
No 377
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.77 E-value=0.071 Score=48.27 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEME 39 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~ 39 (433)
...+|+|||+|..|.++|..|+..|+ +++++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45789999999999999999999999 99999975
No 378
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.73 E-value=0.059 Score=51.79 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc-CC-CeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG-NI-NYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~-g~-~v~v~e~~~~ 41 (433)
..++|+|||+|.-|+..|..|++. |+ +|+++|+...
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 356899999999999999999999 99 9999998765
No 379
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.71 E-value=0.063 Score=49.03 Aligned_cols=33 Identities=21% Similarity=0.498 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
.+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999864
No 380
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.67 E-value=0.065 Score=48.77 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
....+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 345799999999999999999999887 899999753
No 381
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.67 E-value=0.066 Score=47.85 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999865
No 382
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=93.61 E-value=0.18 Score=44.82 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
++.|++++|||.|. .|.-+|..|...+..|++++|+.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 56799999999776 79999999999999999998754
No 383
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.58 E-value=0.062 Score=50.84 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
.+++|+|||+|..|+..|..|++ |++|+++|+...
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 35689999999999999999998 999999998653
No 384
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.57 E-value=0.065 Score=48.74 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
+++|+|||+|..|...|..|++.|+ +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999863
No 385
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.43 E-value=0.066 Score=49.49 Aligned_cols=35 Identities=17% Similarity=0.423 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
...+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34689999999999999999999999 999999864
No 386
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.43 E-value=0.065 Score=51.70 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|+|||+|..|+..|..|++.|++|+++|+..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 387
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=93.36 E-value=0.13 Score=45.29 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.+.||+++|||.|. .|.-+|..|...+..|++++++.
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t 194 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT 194 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 56799999999876 79999999999999999988653
No 388
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.35 E-value=0.049 Score=49.44 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhc-----C-CCeEEEcc
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEG-----N-INYDLYEM 38 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~-----g-~~v~v~e~ 38 (433)
+.+++|.|||+|..|...|..|.+. | .+|+++++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4446899999999999999999998 9 99999997
No 389
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=93.32 E-value=0.14 Score=45.19 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
++.|++++|||.|. .|.-+|..|...+..|++++++.
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 195 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT 195 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 56799999999876 79999999999999999987653
No 390
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.30 E-value=0.051 Score=51.67 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=48.5
Q ss_pred CeeecCCceeeeC----CeEEecCCceeeccEEEEccC--------CCCCCCCCCcccccc--cCCccccccccccCCCC
Q psy2398 282 DILPKDDIKNLNG----NIVHFVDDTHIEVDTIIYATG--------YNRHFPFIDKEKLEW--KLGIPDLFIHIAPRNLD 347 (433)
Q Consensus 282 ~v~~~~~v~~~~~----~~v~~~dG~~~~~D~vi~atG--------~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~p 347 (433)
+|.....|+++.. ..|.+.+|+++++|.||+|+| +.|+++-+..+.+.. ......++. .+.+..+
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~-~~~~~~~ 297 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILI-HVRGAEA 297 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEE-EEESCCT
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEE-EECCCCc
Confidence 6667788888852 246677888899999999999 888877543332221 112233333 3355568
Q ss_pred cEEEEcccc
Q psy2398 348 NIFFFGFVN 356 (433)
Q Consensus 348 ~i~~iG~~~ 356 (433)
++|+.||+.
T Consensus 298 ~i~~~~d~~ 306 (431)
T 3k7m_X 298 GIECVGDGI 306 (431)
T ss_dssp TEEEEBSSS
T ss_pred CceEcCCCC
Confidence 888888863
No 391
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.27 E-value=0.077 Score=49.93 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|+.++..+...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999865
No 392
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.27 E-value=0.04 Score=52.52 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3589999999999999999999999999999876
No 393
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=93.24 E-value=0.17 Score=44.65 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
+..||+++|||.|. .|.-+|..|...+..|++++++.
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T 195 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT 195 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence 56799999999765 89999999999999999988653
No 394
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.19 E-value=0.068 Score=47.80 Aligned_cols=33 Identities=12% Similarity=0.276 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 489999999999999999999999999999865
No 395
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.16 E-value=0.1 Score=44.45 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|+|||+|..|...|..|.+.|++|+++++..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 396
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.14 E-value=0.083 Score=48.85 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 397
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=93.10 E-value=0.15 Score=45.22 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 170 QIRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 170 ~~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
+..+++++|||+|. .|.-+|..|...+..||+++++.
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 199 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 199 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence 56799999999996 69999999999999999987553
No 398
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.10 E-value=0.099 Score=49.84 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|.|||+|.-|...|..|++.|++|+++|+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 34689999999999999999999999999999865
No 399
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.10 E-value=0.097 Score=48.99 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|+.++..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 400
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.10 E-value=0.08 Score=48.84 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
...+|+|+|||.+|..+|+.|...|. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 45799999999999999999999999 799999863
No 401
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.99 E-value=0.04 Score=43.55 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|...+..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 402
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.98 E-value=0.089 Score=47.56 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|||+|.-|...|..|. .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999864
No 403
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.97 E-value=0.093 Score=46.94 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3579999999999999999999 999999999865
No 404
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.97 E-value=0.12 Score=45.91 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|+|.|+|..|...+..|.+.|.+|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 689999999999999999999999999999864
No 405
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.94 E-value=0.081 Score=47.69 Aligned_cols=35 Identities=14% Similarity=0.363 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35789999999999999999999999999999864
No 406
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.92 E-value=0.095 Score=47.58 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=29.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEME 39 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~ 39 (433)
.+.+|+|||||..|.++|..|...++ ++.++|..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 44799999999999999999998885 79999964
No 407
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.91 E-value=0.05 Score=50.82 Aligned_cols=33 Identities=33% Similarity=0.337 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|++|+-+|..|++.|.+|+++.|++.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 499999999999999999999999999998764
No 408
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.88 E-value=0.078 Score=48.06 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC-CeEEEccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEME 39 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~ 39 (433)
.+++|.|||+|..|...|..|.+.|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999985
No 409
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.88 E-value=0.11 Score=50.04 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|.|||+|.-|...|..|++.|++|+++|+..
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999865
No 410
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.87 E-value=0.12 Score=46.75 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=32.3
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 5 NKNIKLCIIGG-GPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 5 ~~~~~v~IIGa-G~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..+++|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 34679999999 99999999999999999999998654
No 411
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.86 E-value=0.11 Score=47.21 Aligned_cols=39 Identities=26% Similarity=0.379 Sum_probs=32.2
Q ss_pred CCCCCCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
|+ +..+.+|+|||+|..|.+.|..|+..++ +++++|...
T Consensus 1 m~-~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MK-NNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CT-TTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CC-CCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 55 2345799999999999999999998876 799999753
No 412
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=92.85 E-value=0.2 Score=43.94 Aligned_cols=36 Identities=11% Similarity=0.113 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCC-CHHHHHHHHhccCCcEEEEEecC
Q psy2398 171 IRNKRVLVVGAGN-SGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 171 ~~~~~v~VvG~G~-sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|++++|||.|. .|.-+|..|...+..|++++++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t 184 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT 184 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 6799999999875 79999999999999999987653
No 413
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.79 E-value=0.083 Score=50.89 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~ 40 (433)
.+++|+|||+|..|+..|..|++. |++|+++|+..
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 346899999999999999999998 79999999864
No 414
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.74 E-value=0.1 Score=49.78 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
..++.|||.|.-|+..|..|++.|++|+++|+...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999998765
No 415
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.68 E-value=0.14 Score=46.40 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 416
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.67 E-value=0.079 Score=49.25 Aligned_cols=34 Identities=32% Similarity=0.243 Sum_probs=31.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
+.|+|||+|..|++.|..+++.|.+|.++.+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 4699999999999999999999999999998763
No 417
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.66 E-value=0.12 Score=48.77 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
...+|+|||+|..|..+|..|.+.|++|+++|+.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 346899999999999999999999999999998653
No 418
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.59 E-value=0.11 Score=47.28 Aligned_cols=35 Identities=20% Similarity=0.476 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34689999999999999999999999999999864
No 419
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.58 E-value=0.12 Score=44.96 Aligned_cols=35 Identities=14% Similarity=0.360 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|.|||+|..|.+.|..|.+.|++|+++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34789999999999999999999999999999864
No 420
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.55 E-value=0.16 Score=48.13 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
...++|+|||+|..|...+..+++.|++|+++|..+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3457899999999999999999999999999986543
No 421
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.55 E-value=0.12 Score=49.71 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|.|||+|..|...|..|++.|++|+++|+..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 422
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.53 E-value=0.1 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.400 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
++|.|||+|..|...|..|.+.|++|+++++...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 423
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.52 E-value=0.074 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEE-EccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDL-YEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v-~e~~~ 40 (433)
+++|.|||+|..|.+.|..|.+.|++|++ +++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999998 78754
No 424
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.51 E-value=0.11 Score=45.45 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
.+|+|||+|-.|..+|..|.+.|+ +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999998 899999864
No 425
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.44 E-value=0.069 Score=50.62 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
++|+|||+|.+|+-.|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999875
No 426
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.42 E-value=0.17 Score=47.20 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
.+++|+|||+|..|..++..+++.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 457899999999999999999999999999997654
No 427
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.39 E-value=0.13 Score=47.72 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|+|+|..|..++..|+..|.+|+++++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 428
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.37 E-value=0.15 Score=45.49 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=31.2
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGG-GPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGa-G~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|.|||+ |..|...|..|.+.|++|+++++..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 368999999 9999999999999999999999864
No 429
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.31 E-value=0.12 Score=46.52 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 899999753
No 430
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.31 E-value=0.1 Score=49.85 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|+|||+|..|+..|..|++.|++|+++|+..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 431
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.27 E-value=0.14 Score=46.24 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
++|+|||||..|...|..|+..|+ +++++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999987 899999754
No 432
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.26 E-value=0.11 Score=46.61 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999754
No 433
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.23 E-value=0.12 Score=45.65 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCC-eEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNIN-YDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~-v~v~e~~~ 40 (433)
+++|.|||+|..|...|..|.+.|++ |.++++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999999 89999764
No 434
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.15 E-value=0.14 Score=46.98 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|.|||+|.-|...|..|.+.|.+|+++++..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999853
No 435
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.07 E-value=0.11 Score=44.27 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.8
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGG-GPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGa-G~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|+|.|| |..|...+..|.+.|.+|+++.+..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 3578999996 9999999999999999999999874
No 436
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.04 E-value=0.15 Score=47.18 Aligned_cols=34 Identities=24% Similarity=0.547 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|.|||.|..|...|..|.+.|++|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999999865
No 437
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.04 E-value=0.14 Score=46.55 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|+|||+|.-|...|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 653
No 438
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.02 E-value=0.17 Score=45.98 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
+.+|+|||||..|.++|..|+..|+ +++++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999764
No 439
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.99 E-value=0.092 Score=49.29 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecCc
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRGY 207 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~~ 207 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 699999999999999999999999999998753
No 440
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.93 E-value=0.081 Score=50.14 Aligned_cols=33 Identities=27% Similarity=0.240 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
++|+|||+|.+|+-.|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 369999999999999999999999999999875
No 441
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.90 E-value=0.13 Score=49.62 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhc--CCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEG--NINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~ 40 (433)
+++|+|||+|..|+..|..|++. |++|+++|+..
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999754
No 442
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=91.85 E-value=0.08 Score=49.34 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999864
No 443
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.79 E-value=0.22 Score=44.67 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCcEEEEC-CChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIG-GGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIG-aG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+.+|.||| +|..|.+.|..|.+.|++|+++++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35899999 99999999999999999999999764
No 444
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.70 E-value=0.17 Score=47.03 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|+|+|..|..+|..|+..|.+|+++|+..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999764
No 445
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.69 E-value=0.094 Score=48.41 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999874
No 446
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.66 E-value=0.24 Score=47.31 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCcceEeCcEEEEEEEeCCe-EEEEEccCcEEEeCEEEEccCCCCC
Q psy2398 91 YLRSYAKKFDVYNHSIFNTEVINLEQYEDI-WEVELSNGKKKKYDFIAVCNGAQRV 145 (433)
Q Consensus 91 ~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~-~~v~~~~g~~~~~d~vIvAtG~~s~ 145 (433)
..+.+++.++. .++++++|++|..++++ +.|++ ++.++.||+||+|++....
T Consensus 217 l~~~l~~~lg~--~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~ 269 (453)
T 2yg5_A 217 VSIRMAEALGD--DVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLY 269 (453)
T ss_dssp HHHHHHHHHGG--GEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGG
T ss_pred HHHHHHHhcCC--cEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHH
Confidence 34445555554 69999999999988777 88876 5678999999999997543
No 447
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.62 E-value=0.18 Score=44.79 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
++|.|||+|..|.+.|..|.+.|+ +|+++++..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899999764
No 448
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.58 E-value=0.15 Score=46.07 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHhcC--CCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN--INYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g--~~v~v~e~~~ 40 (433)
++|+|||+|..|.+.|..|.+.| .+|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999999998 5899999853
No 449
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.58 E-value=0.21 Score=45.29 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
+.+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999888 999999764
No 450
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.58 E-value=0.15 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|.|||+|..|...|..|.+ |++|+++++..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999999864
No 451
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.57 E-value=0.16 Score=45.18 Aligned_cols=34 Identities=18% Similarity=0.008 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|+|.|||..|-..+..|.+.|++|+++.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999999864
No 452
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.57 E-value=0.083 Score=50.73 Aligned_cols=34 Identities=24% Similarity=0.452 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++|+|+|+|-.|...|..|.+.|++|+++|+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3689999999999999999999999999999865
No 453
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.55 E-value=0.18 Score=46.99 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..+|+|||+|..|..+|..++..|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 454
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.54 E-value=0.15 Score=46.27 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhcC-CCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN-INYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g-~~v~v~e~~~ 40 (433)
++|.|||+|..|...|..|.+.| ++|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 58999999999999999999999 9999999864
No 455
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=91.51 E-value=0.091 Score=49.07 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhcc--CCcEEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHH--SEKVYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~--~~~V~~~~r~~~ 207 (433)
++|+|||+|.+|+-+|..|++. |.+|+++.+++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 3699999999999999999998 999999998764
No 456
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.50 E-value=0.21 Score=45.16 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=30.7
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGG-GPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGa-G~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+++|+|+|| |..|...+..|.+.|.+|+++.|..
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 358999997 9999999999999999999999864
No 457
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.47 E-value=0.22 Score=43.84 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.++++|||+|-+|-+++..|.+.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 458
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.45 E-value=0.079 Score=49.18 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=30.2
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999999875
No 459
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.43 E-value=0.16 Score=40.49 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.++++|+|+|..|..++..|.+.+.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5689999999999999999999999999998764
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.43 E-value=0.17 Score=45.51 Aligned_cols=35 Identities=29% Similarity=0.496 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
.+.+|+|||||..|...|..|...|+ +++++|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 35789999999999999999999888 899999754
No 461
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.42 E-value=0.15 Score=47.49 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcC-------CCeEEEccCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGN-------INYDLYEMESD 41 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g-------~~v~v~e~~~~ 41 (433)
++|+|||+|.-|.+.|..|++.| .+|+++++...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999998654
No 462
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.42 E-value=0.22 Score=47.94 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
.+++|.|||.|..|...|..|.+.|++|+++++...
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998753
No 463
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.41 E-value=0.095 Score=50.89 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.++|+|||+|.+|+..|..|.+.|.+|+++.+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5689999999999999999999999999999875
No 464
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.40 E-value=0.1 Score=48.65 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=30.2
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 69999999999999999999999999999875
No 465
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.36 E-value=0.12 Score=47.85 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 479999999999999999999999999999864
No 466
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.35 E-value=0.19 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHhc--CCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEG--NINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~--g~~v~v~e~~~ 40 (433)
+|+|||+|..|.+.|..|++. +.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 67999999864
No 467
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.35 E-value=0.14 Score=48.14 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|+|||+|..|+..|..|++ |++|+++|+..
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 468
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.33 E-value=0.16 Score=46.44 Aligned_cols=30 Identities=20% Similarity=0.438 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEcc
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEM 38 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~ 38 (433)
+|+|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 469
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.29 E-value=0.25 Score=44.77 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
++|.|||+|..|-+.|..|.+.|+ +|+++|+.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 689999999999999999999999 899999865
No 470
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.19 E-value=0.09 Score=45.37 Aligned_cols=34 Identities=26% Similarity=0.268 Sum_probs=29.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
...+|+|+|+|..|...|..|.+.|+ |+++|+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 34689999999999999999999999 99999864
No 471
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.19 E-value=0.067 Score=45.90 Aligned_cols=35 Identities=9% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME 39 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~ 39 (433)
...++|.|||+|..|-+.|..|.+.|++|+.+++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 34568999999999999999999999999999874
No 472
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.17 E-value=0.2 Score=42.38 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=29.6
Q ss_pred cEEEEC-CChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIG-GGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIG-aG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|+||| +|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 473
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.16 E-value=0.45 Score=45.95 Aligned_cols=53 Identities=15% Similarity=0.288 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccC---cEEEeCEEEEccCCC
Q psy2398 90 DYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNG---KKKKYDFIAVCNGAQ 143 (433)
Q Consensus 90 ~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g---~~~~~d~vIvAtG~~ 143 (433)
.+.+.+++.++- .+|+++++|++|+.++++++|++.++ .++.||+||+|++..
T Consensus 240 ~l~~~l~~~l~~-~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGT-DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCG-GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC-CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 344445555441 36999999999999888999998876 579999999999864
No 474
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.09 E-value=0.13 Score=48.54 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCc-EEEEEecCc
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEK-VYHSTRRGY 207 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~-V~~~~r~~~ 207 (433)
..|+|||+|.+|+-+|..|++.|.+ |+++.|++.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4799999999999999999999999 999999864
No 475
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.08 E-value=0.22 Score=47.75 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEME 39 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~ 39 (433)
..++|+|||+|..|...+..|.+.|.+|+|+++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3478999999999999999999999999999975
No 476
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=91.08 E-value=0.12 Score=48.41 Aligned_cols=32 Identities=34% Similarity=0.375 Sum_probs=30.6
Q ss_pred eEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999999886
No 477
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=91.05 E-value=0.36 Score=45.64 Aligned_cols=53 Identities=4% Similarity=0.097 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCC
Q psy2398 88 MLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 88 ~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~ 143 (433)
+.++.+..++.++. .++++++|++|+.+++++.|++.+|+ +.||.||+|++..
T Consensus 205 ~~~l~~~l~~~l~~--~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEH--PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSS--CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcc--eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 34555556666553 58899999999988778999988875 8999999999984
No 478
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.04 E-value=0.23 Score=43.90 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+.++|+|+|-.|.++|..|.+.|.+|+++++..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998763
No 479
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.98 E-value=0.15 Score=45.83 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=28.0
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMESD 41 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~~ 41 (433)
.+|.+||-|.-|...|..|.+.|++|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 480
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.97 E-value=0.22 Score=45.17 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 5 NKNIKLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
....+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 345799999999999999999999888 899999743
No 481
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.91 E-value=0.11 Score=48.42 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999874
No 482
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.90 E-value=0.13 Score=47.75 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhccCCcEEEEEec
Q psy2398 172 RNKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRR 205 (433)
Q Consensus 172 ~~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~ 205 (433)
...+|+|||+|.+|+-.|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3568999999999999999999999999999987
No 483
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.88 E-value=0.12 Score=50.25 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=29.7
Q ss_pred eEEEEcCCCCHHHHHHHHhcc-CCcEEEEEecC
Q psy2398 175 RVLVVGAGNSGCDIAVDASHH-SEKVYHSTRRG 206 (433)
Q Consensus 175 ~v~VvG~G~sg~d~a~~l~~~-~~~V~~~~r~~ 206 (433)
.|+|||||.+|+-.|..|++. |.+|+++.+++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 699999999999999999985 99999999886
No 484
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.85 E-value=0.23 Score=44.58 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
.++++|||+|..|.++|..|.+.|. +|++++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899999863
No 485
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.83 E-value=0.19 Score=45.09 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 489999999999999999999999999999764
No 486
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=90.80 E-value=0.23 Score=46.77 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+++|+|+|+|..|...+..+.+.|++|+++| .+
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 35799999999999999999999999999999 44
No 487
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.79 E-value=0.2 Score=45.57 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHhcCC--CeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNI--NYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~--~v~v~e~~~ 40 (433)
+|+|||+|..|.+.|..|.+.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999998 999999753
No 488
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.73 E-value=0.27 Score=47.53 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
.+|.|||+|.-|...|..|++.|++|+++++..
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999865
No 489
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.71 E-value=0.29 Score=42.52 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhcCC----CeEEEccCC
Q psy2398 8 IKLCIIGGGPLGIGLGRELSEGNI----NYDLYEMES 40 (433)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~l~~~g~----~v~v~e~~~ 40 (433)
++|.|||+|..|...|..|.+.|+ +|+++++.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 589999999999999999999998 999999864
No 490
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=90.70 E-value=0.34 Score=41.77 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=33.3
Q ss_pred CCCCCCCCcEEEECC-ChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 1 MKYKNKNIKLCIIGG-GPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 1 M~~~~~~~~v~IIGa-G~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
|.|.-..+.++|.|| |..|..++..|++.|.+|+++++..
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 554445578999998 7999999999999999999998753
No 491
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=90.69 E-value=0.51 Score=45.34 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=36.6
Q ss_pred ceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCC
Q psy2398 104 HSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 104 ~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~ 143 (433)
+++++++|++|+.++++++|++.+|+++.+|+||+|++..
T Consensus 230 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 230 RLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp TEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHH
T ss_pred EEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHH
Confidence 6999999999999888899999998889999999999974
No 492
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.66 E-value=0.25 Score=44.87 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
..+|+|||+|-.|..+|..|...|+ +++++|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999999 799999753
No 493
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=90.62 E-value=0.12 Score=47.87 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=30.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHhccCCcEEEEEecC
Q psy2398 173 NKRVLVVGAGNSGCDIAVDASHHSEKVYHSTRRG 206 (433)
Q Consensus 173 ~~~v~VvG~G~sg~d~a~~l~~~~~~V~~~~r~~ 206 (433)
.+.|+|||+|.+|+-+|..|+ .|.+|+++.+++
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 467999999999999999999 599999999874
No 494
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.61 E-value=0.24 Score=44.30 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 495
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.58 E-value=0.2 Score=44.70 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhcCC-CeEEEccCC
Q psy2398 7 NIKLCIIGGGPLGIGLGRELSEGNI-NYDLYEMES 40 (433)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~l~~~g~-~v~v~e~~~ 40 (433)
..+|+|||+|-.|..+|..|++.|+ +++++|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3689999999999999999999998 799999753
No 496
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.56 E-value=0.26 Score=44.28 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999999863
No 497
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.55 E-value=0.26 Score=44.11 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 6 KNIKLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
..++|.|||+|..|..+|..|+..|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999863
No 498
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.53 E-value=0.25 Score=43.77 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHhcCCCeEEEccCC
Q psy2398 9 KLCIIGGGPLGIGLGRELSEGNINYDLYEMES 40 (433)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~l~~~g~~v~v~e~~~ 40 (433)
+|.|||+|..|.+.|..|.+.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999764
No 499
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=90.50 E-value=0.13 Score=48.30 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhc-cC-CcEEEEEecC
Q psy2398 174 KRVLVVGAGNSGCDIAVDASH-HS-EKVYHSTRRG 206 (433)
Q Consensus 174 ~~v~VvG~G~sg~d~a~~l~~-~~-~~V~~~~r~~ 206 (433)
..|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 8999999875
No 500
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.47 E-value=0.39 Score=45.66 Aligned_cols=56 Identities=7% Similarity=-0.045 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCcceEeCcEEEEEEEeCCeEEEEEccCcEEEeCEEEEccCCC
Q psy2398 86 SMMLDYLRSYAKKFDVYNHSIFNTEVINLEQYEDIWEVELSNGKKKKYDFIAVCNGAQ 143 (433)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~v~~~~g~~~~~d~vIvAtG~~ 143 (433)
..+.+.+.+.++..|. .++++++|++|..+++++.....+|+++.||.||+|+|.+
T Consensus 234 ~~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 234 GELPQGFARLSAIYGG--TYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYV 289 (433)
T ss_dssp THHHHHHHHHHHHHTC--CCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCC--EEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCC
Confidence 4566667777777776 5899999999998877766444577789999999999984
Done!