Query psy240
Match_columns 376
No_of_seqs 240 out of 1995
Neff 7.4
Searched_HMMs 46136
Date Sat Aug 17 00:03:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy240.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/240hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK07349 amidophosphoribosyltr 100.0 1.4E-55 3.1E-60 447.1 31.9 298 10-357 22-320 (500)
2 PRK07847 amidophosphoribosyltr 100.0 2.8E-55 6.2E-60 445.9 31.6 287 14-356 16-309 (510)
3 PRK07631 amidophosphoribosyltr 100.0 2.4E-55 5.2E-60 443.5 30.9 284 17-357 7-291 (475)
4 PRK06781 amidophosphoribosyltr 100.0 5.5E-55 1.2E-59 441.4 32.5 284 17-357 7-291 (471)
5 PRK05793 amidophosphoribosyltr 100.0 1.8E-54 4E-59 439.0 32.0 287 15-356 8-295 (469)
6 PRK06388 amidophosphoribosyltr 100.0 2.4E-54 5.2E-59 436.6 30.0 284 16-356 14-298 (474)
7 PRK07272 amidophosphoribosyltr 100.0 5.6E-54 1.2E-58 434.4 30.6 264 15-334 5-270 (484)
8 PRK09123 amidophosphoribosyltr 100.0 2E-53 4.4E-58 431.2 32.1 289 9-356 9-302 (479)
9 COG0034 PurF Glutamine phospho 100.0 2.2E-53 4.8E-58 414.6 29.3 288 18-358 1-292 (470)
10 KOG0572|consensus 100.0 2E-52 4.4E-57 396.3 27.4 297 21-357 1-299 (474)
11 PRK08525 amidophosphoribosyltr 100.0 4.4E-52 9.6E-57 419.4 31.7 278 21-355 1-281 (445)
12 PRK08341 amidophosphoribosyltr 100.0 2.4E-52 5.3E-57 419.2 29.3 277 19-357 2-279 (442)
13 PLN02440 amidophosphoribosyltr 100.0 4.6E-51 9.9E-56 415.1 31.4 260 21-335 1-261 (479)
14 TIGR01134 purF amidophosphorib 100.0 1.4E-50 3E-55 408.5 32.2 279 22-356 1-280 (442)
15 cd00715 GPATase_N Glutamine am 100.0 1.2E-48 2.6E-53 368.7 30.1 250 22-326 1-251 (252)
16 PRK09246 amidophosphoribosyltr 100.0 6.5E-48 1.4E-52 394.3 28.7 267 21-334 1-273 (501)
17 TIGR03104 trio_amidotrans aspa 100.0 8.8E-43 1.9E-47 364.2 26.7 256 21-368 1-271 (589)
18 PTZ00077 asparagine synthetase 100.0 5.8E-41 1.3E-45 348.6 26.1 243 21-368 1-248 (586)
19 PRK09431 asnB asparagine synth 100.0 9.6E-41 2.1E-45 345.5 23.7 235 21-368 1-238 (554)
20 TIGR03108 eps_aminotran_1 exos 100.0 1.1E-40 2.3E-45 351.8 24.5 254 21-368 1-269 (628)
21 cd01907 GlxB Glutamine amidotr 100.0 3.7E-40 8E-45 310.0 20.8 222 22-290 1-249 (249)
22 cd00714 GFAT Glutamine amidotr 100.0 1.3E-39 2.9E-44 300.1 23.6 211 22-290 1-215 (215)
23 PLN02549 asparagine synthase ( 100.0 5.7E-40 1.2E-44 340.5 23.5 233 21-368 1-236 (578)
24 COG0367 AsnB Asparagine syntha 100.0 4.7E-40 1E-44 339.3 21.8 238 21-368 1-241 (542)
25 PTZ00295 glucosamine-fructose- 100.0 1E-38 2.2E-43 337.0 25.2 224 18-298 21-254 (640)
26 TIGR01536 asn_synth_AEB aspara 100.0 1.3E-38 2.8E-43 325.2 25.0 250 24-368 1-264 (467)
27 PRK00331 glucosamine--fructose 100.0 1.7E-38 3.6E-43 333.9 25.6 221 21-299 1-225 (604)
28 cd00712 AsnB Glutamine amidotr 100.0 4.7E-38 1E-42 290.8 24.7 207 22-302 1-220 (220)
29 TIGR01135 glmS glucosamine--fr 100.0 5.3E-37 1.2E-41 322.7 25.2 219 22-298 1-223 (607)
30 PLN02981 glucosamine:fructose- 100.0 6.6E-37 1.4E-41 324.1 24.8 251 21-299 1-277 (680)
31 COG0449 GlmS Glucosamine 6-pho 100.0 1.8E-36 3.8E-41 308.3 21.3 215 21-296 1-219 (597)
32 PTZ00394 glucosamine-fructose- 100.0 1.6E-35 3.4E-40 312.7 25.8 247 21-298 1-279 (670)
33 cd00352 Gn_AT_II Glutamine ami 100.0 1.5E-34 3.3E-39 265.6 23.0 215 22-288 1-220 (220)
34 TIGR03442 conserved hypothetic 100.0 1.3E-32 2.9E-37 258.7 16.5 218 21-297 1-248 (251)
35 cd03766 Gn_AT_II_novel Gn_AT_I 100.0 1.3E-30 2.8E-35 233.9 18.9 161 21-246 1-164 (181)
36 KOG0571|consensus 100.0 1.7E-31 3.7E-36 257.4 12.6 233 21-368 1-236 (543)
37 cd01908 YafJ Glutamine amidotr 100.0 3.6E-30 7.8E-35 243.6 16.5 236 21-293 1-257 (257)
38 KOG1268|consensus 100.0 6.8E-29 1.5E-33 244.1 12.3 194 21-220 1-203 (670)
39 cd01909 betaLS_CarA_N Glutamin 99.9 1.1E-26 2.3E-31 210.5 15.1 147 114-302 44-198 (199)
40 PF00310 GATase_2: Glutamine a 99.9 4.4E-26 9.6E-31 224.0 17.4 143 70-220 168-350 (361)
41 PF13522 GATase_6: Glutamine a 99.9 6.4E-26 1.4E-30 193.8 15.4 121 92-245 10-133 (133)
42 cd00713 GltS Glutamine amidotr 99.9 2.2E-24 4.8E-29 213.4 22.0 206 39-297 144-399 (413)
43 PF13230 GATase_4: Glutamine a 99.9 3.9E-24 8.4E-29 203.5 11.6 231 21-296 1-254 (271)
44 PF13537 GATase_7: Glutamine a 99.9 5E-24 1.1E-28 180.1 6.7 117 100-246 1-120 (125)
45 cd01910 Wali7 This domain is p 99.8 6.2E-19 1.3E-23 161.0 15.0 135 115-302 63-200 (224)
46 PRK11750 gltB glutamate syntha 99.8 1.2E-17 2.6E-22 184.0 16.7 230 19-296 135-408 (1485)
47 COG0067 GltB Glutamate synthas 99.7 1.9E-17 4E-22 161.2 14.9 140 73-220 178-358 (371)
48 COG0121 Predicted glutamine am 99.7 4.7E-16 1E-20 145.6 15.1 130 21-165 1-137 (252)
49 KOG0573|consensus 99.5 9.1E-13 2E-17 129.1 14.7 145 21-220 1-147 (520)
50 PF12481 DUF3700: Aluminium in 98.9 1.4E-08 3.1E-13 91.8 12.8 125 123-297 74-201 (228)
51 KOG0399|consensus 98.6 6E-07 1.3E-11 96.7 12.8 180 70-293 257-479 (2142)
52 PF09147 DUF1933: Domain of un 97.5 0.00044 9.4E-09 60.8 8.4 81 126-220 49-130 (201)
53 COG0034 PurF Glutamine phospho 95.1 0.009 1.9E-07 60.1 1.2 39 328-374 419-457 (470)
54 PRK09123 amidophosphoribosyltr 94.9 0.014 3.1E-07 60.1 2.2 44 328-375 431-475 (479)
55 PRK06388 amidophosphoribosyltr 93.8 0.028 6E-07 57.9 1.6 39 328-374 427-465 (474)
56 PRK06781 amidophosphoribosyltr 93.7 0.037 7.9E-07 57.0 2.2 42 328-373 419-460 (471)
57 PRK07631 amidophosphoribosyltr 93.5 0.039 8.4E-07 56.9 1.9 43 328-374 419-461 (475)
58 PRK05793 amidophosphoribosyltr 93.3 0.043 9.4E-07 56.5 1.9 37 328-373 424-460 (469)
59 PRK07847 amidophosphoribosyltr 92.9 0.056 1.2E-06 56.2 2.1 38 328-373 438-475 (510)
60 PLN02440 amidophosphoribosyltr 92.6 0.053 1.1E-06 56.1 1.4 38 328-373 411-448 (479)
61 PRK08341 amidophosphoribosyltr 92.6 0.056 1.2E-06 55.2 1.6 37 328-374 405-441 (442)
62 PRK07349 amidophosphoribosyltr 92.2 0.07 1.5E-06 55.3 1.6 38 328-373 448-485 (500)
63 PRK07272 amidophosphoribosyltr 91.5 0.086 1.9E-06 54.5 1.4 41 329-373 422-462 (484)
64 PRK09246 amidophosphoribosyltr 90.5 0.14 3E-06 53.3 1.9 39 328-371 429-467 (501)
65 PRK08525 amidophosphoribosyltr 89.1 0.19 4.2E-06 51.5 1.6 35 328-371 411-445 (445)
66 KOG0572|consensus 86.1 0.29 6.2E-06 48.4 0.7 36 328-369 427-462 (474)
67 TIGR01134 purF amidophosphorib 81.0 0.73 1.6E-05 47.2 1.2 31 331-369 412-442 (442)
68 cd00713 GltS Glutamine amidotr 36.9 36 0.00078 34.6 3.6 40 22-62 1-48 (413)
69 PRK11750 gltB glutamate syntha 24.1 68 0.0015 37.8 3.3 43 18-62 11-62 (1485)
No 1
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.4e-55 Score=447.11 Aligned_cols=298 Identities=38% Similarity=0.604 Sum_probs=248.6
Q ss_pred cCCccccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccc
Q psy240 10 ASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENL 89 (376)
Q Consensus 10 ~~~~~~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l 89 (376)
.+....++.++||||||+++... ++..+++.+|.+|+|||||++||++.++. .+.++|++|+++++|++..+
T Consensus 22 ~~~~~~~~~~emCGI~Gi~~~~~-----~~~~~~~~gL~~LqHRGqdsaGIa~~~~~---~~~~~K~~Glv~~vf~~~~l 93 (500)
T PRK07349 22 SSEERPDKPEEACGVFGVYAPGE-----EVAKLTYFGLYALQHRGQESAGIATFEGD---KVHLHKDMGLVSQVFDEDIL 93 (500)
T ss_pred cccccCCCcccCCeEEEEECCCc-----CHHHHHHHHHHHhcccCcCcceEEEEeCC---EEEEEecCcchhhhcchhhh
Confidence 33344567889999999998542 35577889999999999999999999863 78999999999999998778
Q ss_pred cccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCC
Q psy240 90 KKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPP 169 (376)
Q Consensus 90 ~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~ 169 (376)
+.+.|+++|||+||||+|.++..|+|||...+..++++++|||+|+|+.+||++|...|+.|.+.||||+|+++|.+.+.
T Consensus 94 ~~l~G~i~IGHvRysT~G~~~~~naQP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi~~li~~~~~ 173 (500)
T PRK07349 94 EELPGDLAVGHTRYSTTGSSRKANAQPAVLETRLGPLALAHNGNLVNTVELREELLARGCELTTTTDSEMIAFAIAQAVD 173 (500)
T ss_pred hcCCCCEEEEEeecccCCCCCccCCCCeEeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHHh
Confidence 88899999999999999987778999999755568899999999999999999999999999999999999999987643
Q ss_pred CCCCCCCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCc
Q psy240 170 DGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGID 248 (376)
Q Consensus 170 ~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~ 248 (376)
+ +.++.+++..++++|+|+|||++.+++.|+++||++|+|||||+... ...++.++| ||+
T Consensus 174 ~----~~~~~eai~~~~~~l~G~ya~vi~~~~~l~aaRDp~GiRPL~~G~~~-------------~~~~~~~~~ASE~-- 234 (500)
T PRK07349 174 A----GKDWLEAAISAFQRCQGAFSLVIGTPEGLMGVRDPNGIRPLVIGTLG-------------EGGPGRYVLASET-- 234 (500)
T ss_pred c----CCCHHHHHHHHHHHhhhhEEEEEEeCCEEEEEECCCCCCCeEEEecc-------------cCCCCeEEEEecc--
Confidence 2 56799999999999999999999999999999999999999999741 001347888 999
Q ss_pred cchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCccccc
Q psy240 249 SRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEG 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~ 328 (376)
+++.. +|.+.|++|+||++++|++++++..++. + ..+.++|+||||||+||||.+++
T Consensus 235 ---------~Al~~-----------lg~~~ir~v~PGeiv~i~~~g~~~~~~~--~-~~~~~~C~fE~vYfarpdS~~~g 291 (500)
T PRK07349 235 ---------CALDI-----------IGAEYLRDVEPGELVWITEGGLSSFHWA--Q-EPQRKLCIFEMIYFARPDSRMHG 291 (500)
T ss_pred ---------chhhh-----------cCCceEEEeCCCeEEEEECCceEEEecc--c-CCCcceeEEEeeeccCCCCccCC
Confidence 56643 5678899999999999999887776542 2 23457899999999999999999
Q ss_pred chhhhHhhHHHHHHHhhhcccccccCCCc
Q psy240 329 ADSLQYLSVEGLKQAVQLKMKVDSAEGSF 357 (376)
Q Consensus 329 ~~~~~~~~~~~l~~Av~~rl~~d~~vg~~ 357 (376)
...++.+.+-.-..|-+.....|+.+++-
T Consensus 292 ~~V~~~R~~~G~~La~~~~~~~DvVv~VP 320 (500)
T PRK07349 292 ESLYSYRQRLGQQLAKESPVDADLVIGVP 320 (500)
T ss_pred eEHHHHHHHHHHHHhhhcccCCcEEEEec
Confidence 98877665555566644444556665553
No 2
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.8e-55 Score=445.89 Aligned_cols=287 Identities=35% Similarity=0.590 Sum_probs=247.1
Q ss_pred cccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccC
Q psy240 14 VVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLK 93 (376)
Q Consensus 14 ~~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~ 93 (376)
..++.++||||||+++... ++..+++.+|.+|||||||++|+++.++. .+.++|+.|+++++|++.+++.+.
T Consensus 16 ~~~~~~emCGI~Gi~~~~~-----~~~~~~~~gL~~LqHRGqdsaGIa~~d~~---~i~~~K~~Glv~~vf~d~~l~~l~ 87 (510)
T PRK07847 16 GEKGPQDECGVFGVWAPGE-----EVAKLTYYGLYALQHRGQEAAGIAVSDGS---QILVFKDLGLVSQVFDEQTLASLQ 87 (510)
T ss_pred ccCCccccCeEEEEECCCc-----CHHHHHHHHHHHHhhhCcCcccEEEEeCC---EEEEEecCccHHHhhchhhhhhcC
Confidence 3467889999999998642 34577889999999999999999998853 688999999999999988888899
Q ss_pred ccEEEEEeccccCCCCCCCCCCCceeecC-CCcEEEEEEeeecChHHHHHHHHhCCCC-----cccCCHHHHHHHHHHhC
Q psy240 94 GNLGIGHTRYSTSAASEEVNCQPFVVHTA-HGVLAVAHNGEIVNAERLRRMVLSRGVG-----LSTRSDSELITQALCLN 167 (376)
Q Consensus 94 ~~~~igH~R~at~g~~~~~n~qPf~~~~~-~~~~~~v~NGeI~N~~~L~~~L~~~g~~-----~~~~tDsE~i~~l~~~~ 167 (376)
++++|||+||+|+|.++..|+|||..... .++++++|||+|+|+++||++|...|+. |.+.||||+|++++.++
T Consensus 88 G~i~IGHvR~sT~G~~~~~naQP~~~~~~~~g~ialvHNG~I~N~~eLr~~L~~~G~~~~~~~f~s~sDSEVI~~Li~~~ 167 (510)
T PRK07847 88 GHVAIGHCRYSTTGASTWENAQPTFRATAAGGGVALGHNGNLVNTAELAARARDRGLIRGRDPAGATTDTDLVTALLAHG 167 (510)
T ss_pred CcEEEEeccCCcCCCCcccCCCCcCcccCCCCCEEEEEEEEEeCHHHHHHHHHhcCCccccCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999887789999985333 6889999999999999999999888864 89999999999999987
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecC
Q psy240 168 PPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEG 246 (376)
Q Consensus 168 ~~~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~ 246 (376)
..+ + ++.+++..++++++|+|||+++|+++|+++||++|.|||||+.. ++.++| ||+
T Consensus 168 ~~~----~-~~~eai~~~~~~l~G~yA~vi~d~~~L~aaRDp~GirPL~~g~~-----------------~~~~~vASE~ 225 (510)
T PRK07847 168 AAD----S-TLEQAALELLPTVRGAFCLVFMDEHTLYAARDPQGVRPLVLGRL-----------------ERGWVVASET 225 (510)
T ss_pred ccC----C-CHHHHHHHHHHHhhhheEEEEEECCEEEEEECCCCCCCcEEEEE-----------------CCeEEEEech
Confidence 431 2 78999999999999999999999999999999999999999986 567888 998
Q ss_pred CccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCccc
Q psy240 247 IDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIF 326 (376)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~ 326 (376)
+++.. ++.+.|++|+|||+++|++++++..++|. .+.++|+||||||+||||.+
T Consensus 226 -----------~AL~~-----------~g~~~ir~v~PGeiv~I~~~gv~~~~~~~----~~~~~C~fE~vYfarpdS~~ 279 (510)
T PRK07847 226 -----------AALDI-----------VGASFVREIEPGELIAIDADGLRSTRFAE----PTPKGCVFEYVYLARPDTTI 279 (510)
T ss_pred -----------HHHhc-----------cCCcEEEEECcCEEEEEECCceEEEeccC----CCCCCCeEEEEEecCCccee
Confidence 55533 45688999999999999999988888773 23468999999999999999
Q ss_pred ccchhhhHhhHHHHHHHhhhcccccccCCC
Q psy240 327 EGADSLQYLSVEGLKQAVQLKMKVDSAEGS 356 (376)
Q Consensus 327 ~~~~~~~~~~~~~l~~Av~~rl~~d~~vg~ 356 (376)
++.+.++.+.+-.-..|-+.....|..+++
T Consensus 280 ~g~~v~~~R~~~G~~La~~~~~~~D~VvpV 309 (510)
T PRK07847 280 AGRSVHAARVEIGRRLAREHPVEADLVIPV 309 (510)
T ss_pred CCeEHHHHHHHHHHHHHhhCCCCCeEEEec
Confidence 999988877777777776666666665554
No 3
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.4e-55 Score=443.50 Aligned_cols=284 Identities=33% Similarity=0.599 Sum_probs=246.6
Q ss_pred ccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccE
Q psy240 17 GLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNL 96 (376)
Q Consensus 17 ~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~ 96 (376)
+.++||||||+++... ...+++.+|.+|+|||||++|+++.++. .+..+|+.|.++++|.+..++.+.|++
T Consensus 7 ~~~emCGI~Gi~~~~~------~~~~~~~gL~~LqHRG~dsaGia~~~~~---~~~~~k~~Glv~~vf~~~~l~~l~G~~ 77 (475)
T PRK07631 7 GLNEECGVFGIWGHEE------AAQITYYGLHSLQHRGQEGAGIVVTDGG---KLSAHKGLGLVTEVFQNGELDALKGKA 77 (475)
T ss_pred CcccCCcEEEEECCch------hHHHHHHHHHHhcCCCcccCeEEEEcCC---EEEEEEcccccchhhchhhhhccCCCE
Confidence 5789999999998642 3577889999999999999999998753 688999999999999887788889999
Q ss_pred EEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Q psy240 97 GIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGP 176 (376)
Q Consensus 97 ~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~ 176 (376)
+|||+||||+|.++..|+|||...+.+++++++|||+|+|+++||++|...|+.|.+.||||+|+++|.++. ..
T Consensus 78 gIGH~RysT~G~~~~~n~QP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi~~Li~~~~------~~ 151 (475)
T PRK07631 78 AIGHVRYATAGGGGYENVQPLLFRSQTGSLALAHNGNLVNATQLKLQLENQGSIFQTTSDTEVLAHLIKRSG------AP 151 (475)
T ss_pred EEEEeeccccCCCCcCCcCCeEeEcCCCCEEEEEEEEEECHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHc------CC
Confidence 999999999998878899999865677899999999999999999999999999999999999999999873 24
Q ss_pred CHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhh
Q psy240 177 DWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIM 255 (376)
Q Consensus 177 ~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~ 255 (376)
++.+++..++++++|+|||++++++.|+++|||+|+|||||+.. ++.++| ||.
T Consensus 152 ~~~eai~~~~~~l~G~yalvi~~~~~l~aaRDp~GirPL~~G~~-----------------~~~~~~ASE~--------- 205 (475)
T PRK07631 152 TLKEQIKNALSMLKGAYAFLLMTETELYVALDPNGLRPLSIGRL-----------------GDAYVVASET--------- 205 (475)
T ss_pred CHHHHHHHHHHhCCCCceeeEEeCCEEEEEECCCCCCCEEEEEe-----------------CCEEEEEeCh---------
Confidence 78999999999999999999999999999999999999999986 567888 998
Q ss_pred hcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHh
Q psy240 256 KGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYL 335 (376)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~ 335 (376)
+++.. ++.+.+++|+|||+++|++++.+..++. +..+.++|+||||||+||||.+++.+.++.+
T Consensus 206 --~Al~~-----------~g~~~ir~v~PGeiv~i~~~g~~~~~~~---~~~~~~~C~fE~iYfarpdS~~~g~~vy~~R 269 (475)
T PRK07631 206 --CAFDV-----------IGATYEREVEPGELLIINDEGMRSERFA---PNQNRSICSMEYIYFARPDSNVDGINVHTAR 269 (475)
T ss_pred --HHHhh-----------cCcceEEEcCCCeEEEEECCcEEEEecC---CCCCcccceEEEEEeecCCcccCCeEHHHHH
Confidence 55543 5667899999999999999987765542 2234578999999999999999999988877
Q ss_pred hHHHHHHHhhhcccccccCCCc
Q psy240 336 SVEGLKQAVQLKMKVDSAEGSF 357 (376)
Q Consensus 336 ~~~~l~~Av~~rl~~d~~vg~~ 357 (376)
.+-.-..|-+.....|+.+++-
T Consensus 270 ~~~G~~La~~~~~~~D~VvpVP 291 (475)
T PRK07631 270 KNLGKRLALEAPVEADVVTGVP 291 (475)
T ss_pred HHHHHHHHhhCCCCCcEEEEec
Confidence 7777777766666666666653
No 4
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=5.5e-55 Score=441.40 Aligned_cols=284 Identities=33% Similarity=0.556 Sum_probs=246.3
Q ss_pred ccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccE
Q psy240 17 GLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNL 96 (376)
Q Consensus 17 ~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~ 96 (376)
++++||||||+++... ...+++.+|.+|+|||||++|+++.++. .+..+|+.|.++++|++..++.+.|++
T Consensus 7 ~~~~mCGI~Gi~~~~~------~~~~~~~gL~~LqhRG~dsaGia~~d~~---~~~~~k~~GlV~~vf~~~~l~~l~g~~ 77 (471)
T PRK06781 7 GLNEECGVFGIWGHEN------AAQVSYYGLHSLQHRGQEGAGIVVNNGE---KIVGHKGLGLISEVFSRGELEGLNGKS 77 (471)
T ss_pred CccccCeEEEEEcCcc------HHHHHHHHHHHhhCcCcCcceEEEEeCC---EEEEEecCcchhhhcchhhHhcCCCCE
Confidence 5789999999998643 3567889999999999999999998753 688999999999999987788899999
Q ss_pred EEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Q psy240 97 GIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGP 176 (376)
Q Consensus 97 ~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~ 176 (376)
+|||+||||+|.++..|+|||......++++++|||+|+|+++||++|...|+.|.+.||||+|+++|.++. +.
T Consensus 78 ~IGHvRyaT~G~~~~~naqP~~~~~~~g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEvI~~Li~~~~------~~ 151 (471)
T PRK06781 78 AIGHVRYATAGGSEVANVQPLLFRFSDHSMALAHNGNLINAKMLRRELEAEGSIFQTSSDTEVLLHLIKRST------KD 151 (471)
T ss_pred EEEEeEcccCCCCCcCCCCCeEEecCCCCEEEEEEEEEcCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHc------CC
Confidence 999999999998777899999765457889999999999999999999999999999999999999999873 35
Q ss_pred CHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhh
Q psy240 177 DWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIM 255 (376)
Q Consensus 177 ~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~ 255 (376)
++.+++..++++++|+||++++++++++++||++|+|||||+.. ++.++| ||+
T Consensus 152 ~~~eai~~~~~~l~G~ya~vi~~~~~l~aaRD~~GirPL~~g~~-----------------~~~~~~ASE~--------- 205 (471)
T PRK06781 152 SLIESVKEALNKVKGAFAYLLLTGNEMIVALDPNGFRPLSIGKM-----------------GDAYVVASET--------- 205 (471)
T ss_pred CHHHHHHHHHHhCCCcEEEEEEECCEEEEEECCCCCCCeEEEEE-----------------CCEEEEEECc---------
Confidence 78999999999999999999999999999999999999999986 567888 999
Q ss_pred hcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHh
Q psy240 256 KGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYL 335 (376)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~ 335 (376)
+++.. +|.+.|++|+||++++|+.++++..++. ...+.++|+||||||+||||.+++...+..+
T Consensus 206 --~Al~~-----------~g~~~ir~v~pGeiv~i~~~g~~~~~~~---~~~~~~~C~fE~vYfarpds~~~g~~vy~~R 269 (471)
T PRK06781 206 --CAFDV-----------VGATYIRDVEPGELLIINDEGIHVDRFT---NEVDHAICSMEYIYFARPDSNIAGINVHAAR 269 (471)
T ss_pred --hHhhh-----------cCCcEEEEeCCCEEEEEECCceEEEecC---cCcccccceEEEEEecCCCceeCCEEHHHHH
Confidence 56543 5678899999999999999888776653 2234578999999999999999999988777
Q ss_pred hHHHHHHHhhhcccccccCCCc
Q psy240 336 SVEGLKQAVQLKMKVDSAEGSF 357 (376)
Q Consensus 336 ~~~~l~~Av~~rl~~d~~vg~~ 357 (376)
.+-.-..|-+.....|+.+++-
T Consensus 270 ~~~G~~La~~~~~~~D~vv~VP 291 (471)
T PRK06781 270 KNMGKRLAAEAPIEADVVTGVP 291 (471)
T ss_pred HHHHHHHhhhCCCCCcEEEEcC
Confidence 7777777766556667666653
No 5
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.8e-54 Score=438.96 Aligned_cols=287 Identities=39% Similarity=0.650 Sum_probs=246.5
Q ss_pred ccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCc
Q psy240 15 VSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKG 94 (376)
Q Consensus 15 ~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~ 94 (376)
.++.++||||||+++.... ++...++.+|.+|||||||++|+++.++. .+..+|+.|+++++|++.+++.+.+
T Consensus 8 ~~~~~~mCGI~Gi~~~~~~----~~~~~~~~gL~~LqhRG~dsaGIa~~~~~---~~~~~k~~G~v~~~f~~~~l~~l~g 80 (469)
T PRK05793 8 GDKFKEECGVFGVFSKNNI----DVASLTYYGLYALQHRGQESAGIAVSDGE---KIKVHKGMGLVSEVFSKEKLKGLKG 80 (469)
T ss_pred CCCcCcCCeEEEEEcCCCc----cHHHHHHHHHHHHhhhCCCcceEEEEeCC---EEEEEecccccccccchhhHhccCC
Confidence 4568899999999986531 35577889999999999999999998763 6889999999999999888888999
Q ss_pred cEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCC
Q psy240 95 NLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERD 174 (376)
Q Consensus 95 ~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~ 174 (376)
+++|||+||||+|.++..|+|||.....+++++++|||+|+|+++||++|...|+.|.+.||||+|++++.+++
T Consensus 81 ~~~iGHvR~sT~G~~~~~n~qPf~~~~~~g~~alvhNG~I~N~~eLr~~L~~~g~~f~s~sDSEvi~~li~~~~------ 154 (469)
T PRK05793 81 NSAIGHVRYSTTGASDLDNAQPLVANYKLGSIAIAHNGNLVNADVIRELLEDGGRIFQTSIDSEVILNLIARSA------ 154 (469)
T ss_pred cEEEEEeecccCCCCCCCCCCCeEeecCCCCEEEEEEEEEeCHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHc------
Confidence 99999999999998878899999975567899999999999999999999988999999999999999999874
Q ss_pred CCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhh
Q psy240 175 GPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFN 253 (376)
Q Consensus 175 g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~ 253 (376)
..++.+++.+++++++|+||++++++++|+++||++|.|||||+.. ++.++| ||+
T Consensus 155 ~~~~~~ai~~~~~~l~G~ya~vi~~~~~l~a~RD~~GirPL~~g~~-----------------~~~~~vASE~------- 210 (469)
T PRK05793 155 KKGLEKALVDAIQAIKGSYALVILTEDKLIGVRDPHGIRPLCLGKL-----------------GDDYILSSES------- 210 (469)
T ss_pred cCCHHHHHHHHHHHhhhhceEEEEECCEEEEEECCCCCCCcEEEEE-----------------CCEEEEEECh-------
Confidence 2468899999999999999999999999999999999999999986 567888 999
Q ss_pred hhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhh
Q psy240 254 IMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQ 333 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~ 333 (376)
+++.. ++.+.|++|+|||+++++.++.+..++- +..+.++|+||||||+||||.+++.+.++
T Consensus 211 ----~al~~-----------~g~~~~r~v~pGeiv~i~~~g~~~~~~~---~~~~~~~C~fe~vYfarpds~~~g~~v~~ 272 (469)
T PRK05793 211 ----CALDT-----------IGAEFIRDVEPGEIVIIDEDGIKSIKFA---EKTKCQTCAFEYIYFARPDSVIDGISVYE 272 (469)
T ss_pred ----HHHhh-----------cCcceEEEeCCCeEEEEECCceEEEecC---cCccccccEEEEEEeccCCcccCCeEhhH
Confidence 55533 5568899999999999999887766542 22455789999999999999999999888
Q ss_pred HhhHHHHHHHhhhcccccccCCC
Q psy240 334 YLSVEGLKQAVQLKMKVDSAEGS 356 (376)
Q Consensus 334 ~~~~~~l~~Av~~rl~~d~~vg~ 356 (376)
.+.+..-..|-+.....|..+++
T Consensus 273 ~R~~~G~~La~~~~~~~D~Vv~v 295 (469)
T PRK05793 273 SRVRAGRQLYKEYPVDADIVIGV 295 (469)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEc
Confidence 77666666665555455555554
No 6
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.4e-54 Score=436.57 Aligned_cols=284 Identities=34% Similarity=0.565 Sum_probs=240.7
Q ss_pred cccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCcc
Q psy240 16 SGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGN 95 (376)
Q Consensus 16 ~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~ 95 (376)
++.++||||||+++... +..+++.+|.+|+|||||++|+++.++. .+..+|+.|+++++|++. .+.+.|+
T Consensus 14 ~~~~emCGI~G~~~~~~------~~~~~~~gL~~LqhRGqdsaGIa~~d~~---~i~~~K~~Glv~~vf~~~-~~~l~G~ 83 (474)
T PRK06388 14 QKPSEDCAVVGFKGGIN------AYSPIITALRTLQHRGQESAGMAVFDGR---KIHLKKGMGLVTDVFNPA-TDPIKGI 83 (474)
T ss_pred CCCCcCCeEEEEECCcc------hHHHHHHHHHHhhCcCcCcceEEEEcCC---EEEEEecCcchHHHhhhh-hhcCCCc
Confidence 46789999999998642 4578899999999999999999998863 689999999999999866 3678899
Q ss_pred EEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Q psy240 96 LGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDG 175 (376)
Q Consensus 96 ~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g 175 (376)
++|||+||||+|..+..|+|||...+..++++++|||+|+|+.+||++|..+|+.|.+.||||+++++|.+.+. .
T Consensus 84 ~gIGH~RyaT~G~~~~~naqP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVi~~li~~~~~-----~ 158 (474)
T PRK06388 84 VGVGHTRYSTAGSKGVENAGPFVINSSLGYIGISHNGEIVNADELREEMKKEGYIFQSDSDTEVMLAELSRNIS-----K 158 (474)
T ss_pred EEEeeeeeeecCCCCccCCCCeEeecCCCCEEEEECceECCHHHHHHHHHHCCCcccCCCHHHHHHHHHHHHHh-----c
Confidence 99999999999987788999998655678899999999999999999999999999999999999999976532 2
Q ss_pred CCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhh
Q psy240 176 PDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNI 254 (376)
Q Consensus 176 ~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~ 254 (376)
..+.+++..++++|+|+|||+++++++|+++|||+|+|||||+.. ++.++| ||.
T Consensus 159 ~~~~eai~~~~~~l~G~ya~vi~~~~~l~a~RDp~GiRPL~~G~~-----------------~~~~~~ASE~-------- 213 (474)
T PRK06388 159 YGLKEGFERSMERLRGAYACALMINDRLYAIRDPNGIRPLVLGKN-----------------FDGYIIASES-------- 213 (474)
T ss_pred CCHHHHHHHHHHhccCceeEEEEECCEEEEEECCCCCCceEEEec-----------------CCEEEEEECh--------
Confidence 358899999999999999999999999999999999999999986 567888 998
Q ss_pred hhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhH
Q psy240 255 MKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQY 334 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~ 334 (376)
+++.. ++.+.+++|+||++++|++++.+..... +..++++|+||||||+||||.+++.+.++.
T Consensus 214 ---~Al~~-----------~~~~~i~~l~PGeiv~i~~~g~~~~~~~---~~~~~~~C~fE~iYfarpds~~~g~~vy~~ 276 (474)
T PRK06388 214 ---CAIDA-----------LSGTTIKNVEPGEVVEVFDNGYKTIFKL---DGDKVAHCMFEYVYFSRPDSIIDGINVYQA 276 (474)
T ss_pred ---HHHHh-----------ccCcEEEEeCCCEEEEEECCceEEEEec---CCCccccceEEEEeecCCccccCCcHHHHH
Confidence 55533 4467899999999999999886543322 223457899999999999999999998877
Q ss_pred hhHHHHHHHhhhcccccccCCC
Q psy240 335 LSVEGLKQAVQLKMKVDSAEGS 356 (376)
Q Consensus 335 ~~~~~l~~Av~~rl~~d~~vg~ 356 (376)
+.+-.-..|.+.....|..+++
T Consensus 277 R~~~G~~La~~~~~~~D~VvpV 298 (474)
T PRK06388 277 RVRMGMRLAKESPVEADVVVPV 298 (474)
T ss_pred HHHHHHHHHhhccCCCcEEEee
Confidence 7666677776666666644443
No 7
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=5.6e-54 Score=434.44 Aligned_cols=264 Identities=35% Similarity=0.610 Sum_probs=229.5
Q ss_pred ccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEeccccccccccc-ccccccC
Q psy240 15 VSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFND-ENLKKLK 93 (376)
Q Consensus 15 ~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~-~~l~~~~ 93 (376)
++++++||||||+++.. ++..+++.+|.+|||||||++|+++.++. .+..+|+.|+++++|++ ..++.+.
T Consensus 5 ~~~~~emCGI~Gi~~~~------~~~~~~~~gL~~LqHRGqdsaGIa~~d~~---~i~~~K~~Glv~~vf~~~~~l~~l~ 75 (484)
T PRK07272 5 VKSLNEECGVFGIWGHP------DAAQLTYFGLHSLQHRGQEGAGIVSNDNG---KLKGHRDLGLLSEVFKDPADLDKLT 75 (484)
T ss_pred cCCccccCeEEEEECCc------cHHHHHHHHHHHhcccCCccceEEEEeCC---eeEEEecCCcccchhcchhhHhcCC
Confidence 45688999999999864 24577899999999999999999998863 78999999999999987 5567788
Q ss_pred ccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCC
Q psy240 94 GNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGER 173 (376)
Q Consensus 94 ~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~ 173 (376)
++++|||+||||+|.++..|+|||.....+++++++|||+|+|+.+||++|...|+.|.+.||||+|++++.++.
T Consensus 76 G~~~IGH~RysT~G~~~~~naqP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVI~~Li~~~~----- 150 (484)
T PRK07272 76 GQAAIGHVRYATAGSASIENIQPFLFHFHDMQFGLAHNGNLTNAVSLRKELEKQGAIFHSSSDTEILMHLIRRSH----- 150 (484)
T ss_pred CcEEEEEeeccccCCCCcCCCCCEEeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHc-----
Confidence 999999999999998777899999875567899999999999999999999999999999999999999999873
Q ss_pred CCCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchh
Q psy240 174 DGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRF 252 (376)
Q Consensus 174 ~g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~ 252 (376)
..++.+++..++++++|+||++++++++|+++|||+|+|||||+... ++.++| ||.
T Consensus 151 -~~~~~eai~~~~~~l~G~ya~~i~~~~~l~a~RDp~GirPL~~G~~~----------------~~~~~~ASE~------ 207 (484)
T PRK07272 151 -NPTFMGKLKEALNTVKGGFAYLLLTEDKLIAALDPNGFRPLSIGKMK----------------NGAYVVASET------ 207 (484)
T ss_pred -CCCHHHHHHHHHHHccCceeEEEEECCEEEEEECCCCCCcEEEEEec----------------CCEEEEEECH------
Confidence 34789999999999999999999999999999999999999999851 356788 998
Q ss_pred hhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhh
Q psy240 253 NIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSL 332 (376)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~ 332 (376)
+++.. ++.+.+++|+||++++|+.++.+..+++. + .+.++|+||||||+||||.+++.+..
T Consensus 208 -----~Al~~-----------ig~~~ir~l~PGEiv~i~~~g~~~~~~~~--~-~~~~~C~FE~vYfarpds~i~g~~v~ 268 (484)
T PRK07272 208 -----CAFDV-----------VGAEWVRDVQPGEIVIIDDEGIQYDSYTT--D-TQLAICSMEYIYFARPDSTIHGVNVH 268 (484)
T ss_pred -----HHHhc-----------cCCceEEEcCCCeEEEEECCceEEEEecC--C-ccccccchhhhhhcCCccccCCEEHH
Confidence 55543 55678999999999999999987766542 2 34468999999999999999988755
Q ss_pred hH
Q psy240 333 QY 334 (376)
Q Consensus 333 ~~ 334 (376)
+.
T Consensus 269 ~~ 270 (484)
T PRK07272 269 TA 270 (484)
T ss_pred HH
Confidence 43
No 8
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2e-53 Score=431.18 Aligned_cols=289 Identities=35% Similarity=0.597 Sum_probs=240.4
Q ss_pred ccCCccccccccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEeccccccccccc-c
Q psy240 9 EASSSVVSGLTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFND-E 87 (376)
Q Consensus 9 ~~~~~~~~~~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~-~ 87 (376)
.+.|.+.++.++||||||+++... +...++.+|.+|+|||||++|+++.++. .+..+|..|+++++|.+ .
T Consensus 9 ~~~~~~~~~~~~mCGI~Gi~~~~~------~~~~~~~gL~~LqHRG~dsaGia~~~~~---~~~~~k~~Glv~~vf~~~~ 79 (479)
T PRK09123 9 PDDDLDDDTLREECGVFGILGHPD------AAALTALGLHALQHRGQEAAGIVSFDGE---RFHSERRMGLVGDHFTDAD 79 (479)
T ss_pred ccCCccCCCccccCeEEEEEcCcc------hHHHHHHHHHHhcCcCccCCEEEEEECC---EEEEEecCcchhhhhhhhh
Confidence 455667788999999999998642 3467889999999999999999998763 68999999999999986 4
Q ss_pred cccccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhC
Q psy240 88 NLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLN 167 (376)
Q Consensus 88 ~l~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~ 167 (376)
.++.+.|+++|||+||+|+|.++..|+|||......++++++|||+|+|+.+||++|..+|+.|.+.||||+|++++.++
T Consensus 80 ~l~~l~G~~~IGH~R~sT~G~~~~~n~QP~~~~~~~g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDSEvi~~Li~~~ 159 (479)
T PRK09123 80 VIARLPGNRAIGHVRYSTTGETILRNVQPLFAELEFGGLAIAHNGNLTNALTLRRELIRRGAIFQSTSDTEVILHLIARS 159 (479)
T ss_pred hhhccCCCEEEEEEecccCCCCCcCCCCCceeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHH
Confidence 56778999999999999999877789999986545788999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecC
Q psy240 168 PPDGERDGPDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEG 246 (376)
Q Consensus 168 ~~~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~ 246 (376)
. ..++.+++.+++++|+|+||++++++++|+++||++|+|||||+.. ++.++| ||.
T Consensus 160 ~------~~~~~eai~~~~~~L~G~ya~vil~~~~l~a~RD~~GirPL~~g~~-----------------~~~~~~ASE~ 216 (479)
T PRK09123 160 R------KASFLDRFIDALRQVEGAYSLVALTNTKLIGARDPLGIRPLVLGEL-----------------DGSPILASET 216 (479)
T ss_pred c------cCCHHHHHHHHHHHhhcceeEEEEECCEEEEEECCCCCCceEEEEE-----------------CCEEEEEECc
Confidence 4 2468899999999999999999999999999999999999999986 567888 999
Q ss_pred CccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCC-eEEEEEecCCCCCCCceeeeeeeecccCCcc
Q psy240 247 IDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTG-IKTVSIVRRPDDKPPAFCIFEYVYFARSDSI 325 (376)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~-~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~ 325 (376)
+++.. ++.+.|++|+||++++|+.++ ++...++. ..+.++|+||||||+||||.
T Consensus 217 -----------~Al~~-----------~g~~~~r~v~pGeiv~i~~~g~~~~~~~~~---~~~~~~C~FE~VYfarPdS~ 271 (479)
T PRK09123 217 -----------CALDI-----------IGAEFVRDVEPGELVVIDEDGSIESIKPFP---PQPARFCIFEYVYFARPDSV 271 (479)
T ss_pred -----------hHHhc-----------cCCceEEEECCCeEEEEeCCCcEEEEEecC---CCCCCCChhheEEecCCCce
Confidence 45433 456789999999999999888 65544432 23446899999999999999
Q ss_pred cccchhhhHhhHHHHHHHhhhcc--cccccCCC
Q psy240 326 FEGADSLQYLSVEGLKQAVQLKM--KVDSAEGS 356 (376)
Q Consensus 326 ~~~~~~~~~~~~~~l~~Av~~rl--~~d~~vg~ 356 (376)
+++...++. |..+-+...... ..|..+++
T Consensus 272 ~~g~~vy~~--R~~~g~~La~~~~~~~D~Vv~V 302 (479)
T PRK09123 272 VGGRSVYEV--RKNIGRELARESPVDADVVVPV 302 (479)
T ss_pred ECCeEHHHH--HHHHHHHHHHhCCCCCeEEEEc
Confidence 999987653 444444333333 34444443
No 9
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.2e-53 Score=414.60 Aligned_cols=288 Identities=39% Similarity=0.604 Sum_probs=253.3
Q ss_pred cccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEeccccccccccccccc-ccCccE
Q psy240 18 LTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLK-KLKGNL 96 (376)
Q Consensus 18 ~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~-~~~~~~ 96 (376)
+++||||||+++.+.. ++...++.+|.+||||||+++||++.++. ++..+|..|+++++|++..+. .+.|.+
T Consensus 1 ~~e~CGV~Gi~~~~~~----~a~~~~y~gL~aLQHRGQeaAGI~~~dg~---~~~~~K~~GLV~dvF~~~~~~~~l~G~~ 73 (470)
T COG0034 1 PREMCGVFGIWGHKDN----NAAQLTYYGLYALQHRGQEAAGIAVADGK---RFHTHKGMGLVSDVFNERDLLRKLQGNV 73 (470)
T ss_pred CcccceEEEEecCCcc----chHHHHHHHHHHHhhCCcccccEEEEcCc---eEEEEecCccchhhcCchhhhhhccCcc
Confidence 3689999999998653 46688999999999999999999999975 799999999999999987665 588899
Q ss_pred EEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Q psy240 97 GIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGP 176 (376)
Q Consensus 97 ~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~ 176 (376)
+|||+||+|.|.++..|+|||..+++.+.++++|||.|.|..+||++|...|..|++++|||++++++.+.+. ..
T Consensus 74 ~IGHvRYsTaG~s~~~naQP~~~~~~~g~ialaHNGnl~N~~~Lr~~l~~~g~~f~t~sDsEvll~l~a~~~~-----~~ 148 (470)
T COG0034 74 GIGHVRYSTAGSSSIENAQPFYVNSPGGGIALAHNGNLVNAEELRRELEEEGAIFNTTSDSEVLLHLLARELD-----ED 148 (470)
T ss_pred eeeEeeecCCCCcccccccceEEecCCCcEEEEecCcccCHHHHHHHHHhcCceecCCccHHHHHHHHHhhcc-----cc
Confidence 9999999999998889999999988877899999999999999999999999999999999999999998843 26
Q ss_pred CHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhh
Q psy240 177 DWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIM 255 (376)
Q Consensus 177 ~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~ 255 (376)
++++++..+++++.|+|+++++..+.|+++|||+|+|||.++... ++.+++ ||+
T Consensus 149 ~~~~a~~~~~~~v~G~ys~v~~~~~~lia~RDP~GiRPL~iG~~~----------------dG~yvvaSEt--------- 203 (470)
T COG0034 149 DIFEAVKEVLRRVKGAYALVALIKDGLIAVRDPNGIRPLVLGKLG----------------DGFYVVASET--------- 203 (470)
T ss_pred cHHHHHHHHHhhcCCcEEEEEEECCeEEEEECCCCCccceeeecC----------------CCCEEEEech---------
Confidence 899999999999999999999998999999999999999999962 344888 999
Q ss_pred hcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCC--eEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhh
Q psy240 256 KGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTG--IKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQ 333 (376)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~--~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~ 333 (376)
+++.. +|++.+++|+||+++.+..++ +...++.. ..+.++|+||||||+||||.+++++.+.
T Consensus 204 --~Ald~-----------iGa~~vRdv~pGE~v~i~~~~~g~~s~~~~~---~~~~~~C~fEyVYFARPDS~Idg~sVy~ 267 (470)
T COG0034 204 --CALDI-----------LGAEFVRDVEPGEAVIITIDGDGLESKQVAE---PPRRAPCSFEYVYFARPDSVIDGISVYE 267 (470)
T ss_pred --hhhhc-----------ccceEEEecCCceEEEEEecCceeEEEeccC---CCCCccceEEEEEeecCccccCCeeHHH
Confidence 77755 788999999999999965544 55555442 2255899999999999999999999988
Q ss_pred HhhHHHHHHHhhhcccccccCCCcc
Q psy240 334 YLSVEGLKQAVQLKMKVDSAEGSFG 358 (376)
Q Consensus 334 ~~~~~~l~~Av~~rl~~d~~vg~~~ 358 (376)
.+.+..-+.|-+.-..+|+.+++-+
T Consensus 268 ~R~~mG~~La~e~~~eaDvVipVPD 292 (470)
T COG0034 268 ARKRMGEKLAEEIPVEADVVIPVPD 292 (470)
T ss_pred HHHHHHHHHHHhCCccccEEEecCC
Confidence 8888888888888888898888754
No 10
>KOG0572|consensus
Probab=100.00 E-value=2e-52 Score=396.34 Aligned_cols=297 Identities=53% Similarity=0.848 Sum_probs=257.0
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||||++..++++ . .+.+.....+|||||||++||++.++. +.+.++|+.|+++++|+++++.++.++++|||
T Consensus 1 eCGv~Gi~~a~~~~---~-l~~l~~~~~aLQHRGQesAGIvts~~~--~~~~~~kG~Gmv~dVFte~~l~~L~g~~gIGH 74 (474)
T KOG0572|consen 1 ECGVFGIVAAGEAS---R-LPELALGCVALQHRGQESAGIVTSGGR--GRLYQIKGMGLVSDVFTEDKLSQLPGSIGIGH 74 (474)
T ss_pred CCcEEEEEecCccc---c-CcHHHhhhHHHhhCCccccceEeecCC--CceEEEeccchhhhhhcHHHHhhCccceeeee
Confidence 99999999988763 1 245566678999999999999999874 79999999999999999999999999999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCC-CCCCCHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGE-RDGPDWP 179 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~-~~g~~~~ 179 (376)
+||+|.|.+...|+|||...++.|.++++|||++.|+++||++|...|+.+.++||||+|++++...+.+.+ ..+++++
T Consensus 75 ~RYsTaG~s~~~n~QPFvv~t~~G~lavAHNGnLVN~~~Lrr~l~~~g~~l~T~SDSElil~~~a~~~~~~~~~~~~d~~ 154 (474)
T KOG0572|consen 75 TRYSTAGSSALSNVQPFVVNTPHGSLAVAHNGNLVNYKSLRRELLEEGVGLNTSSDSELILQLIAYAPEDVYRVDAPDWF 154 (474)
T ss_pred eecccccccccccccceEeeccCceEEEeccCcccchHHHHHHHHhcCcccccCCcHHHHHHHHHhchHhhhcccCccHH
Confidence 999999998788999999988999999999999999999999999999999999999999999987755422 2378999
Q ss_pred HHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcc
Q psy240 180 ARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGM 258 (376)
Q Consensus 180 ~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~ 258 (376)
.+|..+++.+.|+|+++++..+.||++|||+|.|||++++..+++ ...+|++ ||+ |
T Consensus 155 ~ri~~~~~~~~g~Yslv~m~~d~l~avRDp~G~RPL~iG~r~~~~------------g~~~~v~aSES-----------c 211 (474)
T KOG0572|consen 155 ARIRDVMELLPGAYSLVFMTADKLYAVRDPYGNRPLCIGRRSNPD------------GTEAWVVASES-----------C 211 (474)
T ss_pred HHHHHHHHhcCCceeEEEEEccEEEEEecCCCCccceEeeecCCC------------CcceEEEEecc-----------e
Confidence 999999999999999999999999999999999999999975422 1258888 999 7
Q ss_pred cccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhHH
Q psy240 259 GMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVE 338 (376)
Q Consensus 259 ~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~~ 338 (376)
++.. ++++..++|.||+++.|++++.++..-...|+..+.++|+|||+||+||||.+++...+..++.-
T Consensus 212 ~f~~-----------i~a~y~Rev~PGEiV~i~r~g~~s~~~~~~~~~~~~~~cIFEyvYFArpdSi~eG~sVY~~R~~~ 280 (474)
T KOG0572|consen 212 AFLS-----------IGARYEREVRPGEIVEISRNGVKSVDIMKRPDENRMAFCIFEYVYFARPDSIFEGQSVYTVRLQC 280 (474)
T ss_pred eeee-----------cccEEEEeecCceEEEEecCCceeeeeecCCccccccceeeeEEEeccCCceecccchHHHHHHH
Confidence 8755 66888999999999999999887766666666668899999999999999999999887766555
Q ss_pred HHHHHhhhcccccccCCCc
Q psy240 339 GLKQAVQLKMKVDSAEGSF 357 (376)
Q Consensus 339 ~l~~Av~~rl~~d~~vg~~ 357 (376)
.-+.|...-+..|+.+.+-
T Consensus 281 G~~LA~e~P~d~DvVi~VP 299 (474)
T KOG0572|consen 281 GEQLATEAPVDADVVIPVP 299 (474)
T ss_pred HhHhhhcCCcccceEEecC
Confidence 5666776666666655443
No 11
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=4.4e-52 Score=419.37 Aligned_cols=278 Identities=33% Similarity=0.606 Sum_probs=231.7
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||||+++... +..++..||.+|+|||||++|+++.++. .+..+|+.|.++++|++..++.+.++++|||
T Consensus 1 MCGI~G~~~~~~------~~~~~~~~L~~LqhRG~DsaGia~~~~~---~~~~~k~~G~v~~~f~~~~~~~~~g~~~iGH 71 (445)
T PRK08525 1 MCAVVGVINSKN------AAKLAYYALFAMQHRGQEASGISVSNGK---KIKTIKGRGLVTQVFNEDNLKTLKGEIAIGH 71 (445)
T ss_pred CceEEEEEcCcc------HHHHHHHHHHHhhCcCcccceEEEEeCC---EEEEEEcCcchhhccchhhhhccCCcEEEee
Confidence 999999998643 4567789999999999999999998753 7899999999999998878888899999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+||||+|..+..|+|||....+.++++++|||+|+|+.+||++|..+|+.|.+.||||+|+++|.++. +.++.+
T Consensus 72 ~R~at~g~~~~~naqP~~~~~~~g~~~lvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEvi~~l~~~~~------~~~~~e 145 (445)
T PRK08525 72 NRYSTAGNDSILDAQPVFARYDLGEIAIVHNGNLVNKKEVRSRLIQDGAIFQTNMDTENLIHLIARSK------KESLKD 145 (445)
T ss_pred cccccCCCCCCCCCCCeEeecCCCCEEEEEEEEEECHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHHc------CCCHHH
Confidence 99999998767899999864467889999999999999999999999999999999999999998873 347889
Q ss_pred HHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhccc
Q psy240 181 RITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMG 259 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~ 259 (376)
++.+++++|+|+|||+++++++|+++||++|+|||||+... ++.++| ||. ++
T Consensus 146 a~~~~~~~L~G~fa~vi~~~~~l~~~RD~~GirPL~~g~~~----------------~~~~~~ASE~-----------~a 198 (445)
T PRK08525 146 RIIEALKKIIGAYCLVLLSRSKMFAIRDPHGVRPLSLGRLK----------------DGGYIVASET-----------CA 198 (445)
T ss_pred HHHHHHHhcCCceEEEEEeCCEEEEEECCCCCCCeEEEEec----------------CCEEEEEECH-----------HH
Confidence 99999999999999999999999999999999999999751 357888 998 44
Q ss_pred ccccccChHHHhhhhCcceEEEeCCCcEEEEe--cCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 260 MISNIFNDENLKKLKGARYVREVYPGEILEVS--RTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 260 ~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~--~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
+.. ++.+.+++++||++++++ .++++..++|. + +.++|+||||||+||||.+++...++.+.+
T Consensus 199 l~~-----------~g~~~~~~~~pGe~v~i~~~~~~~~~~~~~~--~--~~~~c~fe~iY~~rpds~~~g~~v~~~R~~ 263 (445)
T PRK08525 199 FDL-----------IGAEFIRDVKPGEMLIFEQGNDEFESIQLFE--P--TPRICAFEYIYFARPDSIVFGKNVYEVRKK 263 (445)
T ss_pred hhc-----------cCCcEEEEeCCCeEEEEEcCCCceEEEEecC--C--CCccceeEeeeecCCCceECCEEHHHHHHH
Confidence 433 456788999999999998 45677777764 2 257999999999999999999987765433
Q ss_pred HHHHHHhhhcccccccCC
Q psy240 338 EGLKQAVQLKMKVDSAEG 355 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg 355 (376)
-.-..|-+.+...|..++
T Consensus 264 ~G~~La~~~~~~~d~Vv~ 281 (445)
T PRK08525 264 MGEELAKKFPIKADFVVP 281 (445)
T ss_pred HHHHHHHHhcccCCeEEE
Confidence 333333333333343333
No 12
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.4e-52 Score=419.17 Aligned_cols=277 Identities=34% Similarity=0.521 Sum_probs=235.4
Q ss_pred ccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEE
Q psy240 19 THECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGI 98 (376)
Q Consensus 19 ~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~i 98 (376)
++||||||+++. . +...++.+|.+|||||||++|+++.++ .+.++|+.|+++++|++..++++.|+++|
T Consensus 2 ~e~CGI~G~~~~-~------~~~~l~~gL~~LqhRG~dsaGIa~~~~----~~~~~K~~Glv~~vf~~~~~~~l~g~~~I 70 (442)
T PRK08341 2 REKCGIFAAYSE-N------APKKAYYALIALQHRGQEGAGISVWRH----RIRTVKGHGLVSEVFKGGSLSRLKSNLAI 70 (442)
T ss_pred CcccEEEEEECC-C------cHHHHHHHHHHhhccCcccceEEEECC----cEEEEecCCchhhhhcccccccCCCCEEE
Confidence 579999999983 2 346789999999999999999999874 48899999999999988778888999999
Q ss_pred EEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCH
Q psy240 99 GHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDW 178 (376)
Q Consensus 99 gH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~ 178 (376)
||+||||+|.. .|+|||...+..++++++|||+|+|+.+||++|...|+.|.+.||||+|++++...+.+ ..+.
T Consensus 71 GH~R~sT~G~~--~~~QP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVI~~li~~~~~~----~~~~ 144 (442)
T PRK08341 71 GHVRYSTSGSL--SEVQPLEVECCGYKIAIAHNGTLTNFLPLRRKYESRGVKFRSSVDTELIGISFLWHYSE----TGDE 144 (442)
T ss_pred EEeeccccCCC--cCcCCEEeecCCCCEEEEEEEEEECHHHHHHHHHHcCCccCCCCHHHHHHHHHHHHHHh----cCCH
Confidence 99999999964 58999997666789999999999999999999999999999999999999987654321 2366
Q ss_pred HHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 179 PARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 179 ~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
.++++.++++|+|+||+++++++.|+++||++|+|||||+.. ++++| ||.
T Consensus 145 ~~ai~~~~~~l~G~yal~i~~~~~l~a~RD~~GirPL~~G~~------------------~~~~~ASE~----------- 195 (442)
T PRK08341 145 FEAMREVFNEVKGAYSVAILFDGKIIVARDPVGFRPLSYGEG------------------DGHYFASED----------- 195 (442)
T ss_pred HHHHHHHHHhccCceEEEEEECCEEEEEEcCCCceEEEEEEC------------------CEEEEEeCc-----------
Confidence 789999999999999999999999999999999999999973 45778 998
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
+++.. + .+.+++|+||+++++++++++..++- + .+.++|+||||||+||||.+++...+..+.+
T Consensus 196 ~Al~~-----------~-~~~v~~l~PGeiv~i~~~g~~~~~~~---~-~~~~~C~fe~iYfarpds~~~g~~v~~~R~~ 259 (442)
T PRK08341 196 SALRM-----------F-VNEIRDVFPGEVFVVSEGEVESKVLA---R-EKHHHCVFEYIYFARPDSVIDGVSVYSARYR 259 (442)
T ss_pred HHHHh-----------h-CCeEEEeCCCEEEEEECCceEEEeec---c-CCCccceEEEEEecCCccccCCcCHHHHHHH
Confidence 55532 3 35799999999999999888776642 2 3457899999999999999999988777777
Q ss_pred HHHHHHhhhcccccccCCCc
Q psy240 338 EGLKQAVQLKMKVDSAEGSF 357 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg~~ 357 (376)
-.-..|.+.....|..+++-
T Consensus 260 ~G~~La~~~~~~~D~Vv~VP 279 (442)
T PRK08341 260 MGVELARESPAEGDVVIAVP 279 (442)
T ss_pred HHHHhhcccCCCCceEEEec
Confidence 77777777666666666653
No 13
>PLN02440 amidophosphoribosyltransferase
Probab=100.00 E-value=4.6e-51 Score=415.12 Aligned_cols=260 Identities=38% Similarity=0.623 Sum_probs=225.1
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||||+++.. ++...++.||.+|||||||++|+++.++. .+..+|.+|+++++|++.+++.+.++++|||
T Consensus 1 MCGI~Gi~~~~------~~~~~~~~~L~~LqHRGqds~Gi~~~d~~---~~~~~k~~Glv~~vf~~~~l~~l~g~~~IGH 71 (479)
T PLN02440 1 ECGVVGIFGDP------EASRLCYLGLHALQHRGQEGAGIVTVDGN---RLQSITGNGLVSDVFDESKLDQLPGDIAIGH 71 (479)
T ss_pred CceEEEEECCc------cHHHHHHHHHHHHHhhCcccceEEEEcCC---EEEEEecCCchhhhcchhhhhccCCcEEEEE
Confidence 99999999753 24577899999999999999999999864 6888999999999999888888999999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+||+|+|.++..|+|||......++++++|||+|+|+++||++|...|+.|.+.||||+|+++|.+++ ..++.+
T Consensus 72 vRysT~G~~~~~n~QPf~~~~~~g~~~lahNG~I~N~~eLr~~L~~~g~~f~s~sDsEvi~~li~~~~------~~~~~~ 145 (479)
T PLN02440 72 VRYSTAGASSLKNVQPFVANYRFGSIGVAHNGNLVNYEELRAKLEENGSIFNTSSDTEVLLHLIAISK------ARPFFS 145 (479)
T ss_pred EeccccCCCCccCCCCceeecCCCCEEEEEEEEEeCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhh------hhhHHH
Confidence 99999998778899999975566889999999999999999999988999999999999999998874 346889
Q ss_pred HHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhccc
Q psy240 181 RITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMG 259 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~ 259 (376)
++..++++++|+||++++++++|+++|||+|+|||||+... ++.++| ||. ++
T Consensus 146 a~~~~~~~l~G~fa~vi~~~~~l~a~RD~~G~RPL~~g~~~----------------~~~~~vASE~-----------~a 198 (479)
T PLN02440 146 RIVDACEKLKGAYSMVFLTEDKLVAVRDPHGFRPLVMGRRS----------------NGAVVFASET-----------CA 198 (479)
T ss_pred HHHHHHHHhccceeeeEEECCEEEEEECCCCCCceEEEEeC----------------CCEEEEEECc-----------hH
Confidence 99999999999999999999999999999999999999751 456888 998 55
Q ss_pred ccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHh
Q psy240 260 MISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYL 335 (376)
Q Consensus 260 ~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~ 335 (376)
+.. ++.+.|++|+|||+++|+.++....... ++..+.++|+||||||++|+|.+.+...++.+
T Consensus 199 l~~-----------~g~~~ir~v~PGeiv~i~~~g~~~~~~~--~~~~~~~~C~fe~vYf~~p~s~~~g~~~y~~r 261 (479)
T PLN02440 199 LDL-----------IGATYEREVNPGEVIVVDKDKGVSSQCL--MPHPEPKPCIFEHIYFARPNSIVFGRSVYESR 261 (479)
T ss_pred Hhc-----------cCCcEEEEeCCCeEEEEECCCcEEEeec--cCCCCcccceEEEEeecCCCccccCeEhHHHH
Confidence 544 5578899999999999999885443322 22344578999999999999999888766543
No 14
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=100.00 E-value=1.4e-50 Score=408.48 Aligned_cols=279 Identities=41% Similarity=0.641 Sum_probs=235.8
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT 101 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~ 101 (376)
|||||+++... +....++.+|.+|+|||||++|+++.++. .+..+|++|+++++|++.+++.+.++++|||+
T Consensus 1 CGI~Gi~~~~~-----~~~~~~~~~L~~lqhRG~ds~Gia~~d~~---~~~~~k~~glv~~v~~~~~l~~l~g~~~IgHv 72 (442)
T TIGR01134 1 CGVVGIYSQEE-----DAASLTYYGLYALQHRGQEAAGIAVSDGN---KIRTHKGNGLVSDVFDERHLERLKGNVGIGHV 72 (442)
T ss_pred CEEEEEEcCCc-----cHHHHHHHHHHHHHhhCccceEEEEEeCC---EEEEEEcCCchhhhcchhhhhcccCcEEEEEE
Confidence 99999998642 24577889999999999999999999864 78889999999999998888889999999999
Q ss_pred ccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHH
Q psy240 102 RYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPAR 181 (376)
Q Consensus 102 R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~ 181 (376)
||+|+|..+..|+|||...... +++++|||+|+|+++|+++|...|+.+.+.||||+++++|.++... +.++.++
T Consensus 73 R~aT~G~~~~~n~QPf~~~~~~-g~alahNG~I~N~~eLr~~L~~~g~~f~~~sDSEvi~~li~~~~~~----~~~~~~a 147 (442)
T TIGR01134 73 RYSTAGSSSLSNAQPFVVNSPG-GIALAHNGNLVNAEELREELEEEGRIFNTTSDSEVLLHLLARERLE----EDDLFEA 147 (442)
T ss_pred EecCCCCCCccCCCCEEEeCCC-CEEEEEEEEEcCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhhcc----cCCHHHH
Confidence 9999998777899999864334 4999999999999999999998899999999999999999987432 3578999
Q ss_pred HHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccc
Q psy240 182 ITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGM 260 (376)
Q Consensus 182 L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~ 260 (376)
+.+++++++|+||++++++++|+++||++|.|||||+.. ++.++| ||+ +++
T Consensus 148 i~~~~~~l~G~falvi~~~~~L~a~RD~~G~rPL~~g~~-----------------~~~~~~ASE~-----------~al 199 (442)
T TIGR01134 148 IARVLKRVRGAYALVIMIGDGLIAVRDPHGIRPLVLGKR-----------------GDGYVVASES-----------CAL 199 (442)
T ss_pred HHHHHHHhCccceEEEEECCEEEEEECCCCCCCcEEEEe-----------------CCEEEEEeCc-----------hHh
Confidence 999999999999999999999999999999999999986 577888 998 455
Q ss_pred cccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhHHHH
Q psy240 261 ISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSVEGL 340 (376)
Q Consensus 261 ~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~~~l 340 (376)
.. ++.+.|++|+|||++++++++++..++- + .+.++|+||||||+||||.+++...++.+.+-.-
T Consensus 200 ~~-----------~g~~~~r~v~pGeiv~i~~~~~~~~~~~---~-~~~~~c~fe~vYfarpds~~~g~~v~~~R~~~g~ 264 (442)
T TIGR01134 200 DI-----------LGAEFIRDVEPGEAVVIDDGGLESRLFA---N-TPRAPCIFEYVYFARPDSVIDGISVYKARKRMGE 264 (442)
T ss_pred cc-----------cCCcEEEEECCCeEEEEECCcEEEEecc---C-CCCcceEEEEEEecCCcceECCeEHHHHHHHHHH
Confidence 32 3468899999999999999888765542 2 3457899999999999999999988776555555
Q ss_pred HHHhhhcccccccCCC
Q psy240 341 KQAVQLKMKVDSAEGS 356 (376)
Q Consensus 341 ~~Av~~rl~~d~~vg~ 356 (376)
..|-+.....|..+++
T Consensus 265 ~La~~~~~~~D~Vv~V 280 (442)
T TIGR01134 265 KLARESPVEADVVIPV 280 (442)
T ss_pred HHHHhcCCCCEEEEEc
Confidence 5554444455554444
No 15
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type. This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. GPATase crystalizes as a homotetramer, but can also exist as a homdimer.
Probab=100.00 E-value=1.2e-48 Score=368.68 Aligned_cols=250 Identities=46% Similarity=0.740 Sum_probs=214.8
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT 101 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~ 101 (376)
|||+|+++... ..+.+..||.+|+|||||++|+++.++. .+..+|.+|.+.++|++.+++.+.+.++|||+
T Consensus 1 Cgi~g~~~~~~------~~~~~~~~l~~l~~RG~D~~Gi~~~d~~---~~~~~k~~g~~~~~~~~~~~~~~~~~~~lgH~ 71 (252)
T cd00715 1 CGVFGIYGAED------AARLTYLGLYALQHRGQESAGIATSDGK---RFHTHKGMGLVSDVFDEEKLRRLPGNIAIGHV 71 (252)
T ss_pred CEEEEEECCcc------hHHHHHHHHHHHhccCcceeEEEEEeCC---EEEEEecCCcHHHhhcccchhhCCCcEEEEEE
Confidence 99999998642 3467889999999999999999999864 67789999999999988777788899999999
Q ss_pred ccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHH
Q psy240 102 RYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPAR 181 (376)
Q Consensus 102 R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~ 181 (376)
|++|+|..+..|+|||.....+++++++|||+|+|+++|+++|...++.+.+.||||++++++.+++.+ .++.++
T Consensus 72 R~at~g~~~~~n~qPf~~~~~~~~~~~~hNG~I~n~~~L~~~l~~~g~~~~~~tDSEvi~~l~~~~~~~-----~~~~~a 146 (252)
T cd00715 72 RYSTAGSSSLENAQPFVVNSPLGGIALAHNGNLVNAKELREELEEEGRIFQTTSDSEVILHLIARSLAK-----DDLFEA 146 (252)
T ss_pred EcccCCCCCccCCCCcEEecCCCcEEEEEEEEECCHHHHHHHHHHCCCcccCCCHHHHHHHHHHHhhcc-----CCHHHH
Confidence 999999887789999986445678999999999999999999988888889999999999999998531 368899
Q ss_pred HHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccc
Q psy240 182 ITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGM 260 (376)
Q Consensus 182 L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~ 260 (376)
+.++++.++|+||++++|+++|+++||+.|.+||||+... ++.++| ||+ .++
T Consensus 147 l~~~~~~l~G~~a~~~~d~~~l~~~RD~~G~~PL~~~~~~----------------~~~~~vASE~-----------~al 199 (252)
T cd00715 147 IIDALERVKGAYSLVIMTADGLIAVRDPHGIRPLVLGKLE----------------GDGYVVASES-----------CAL 199 (252)
T ss_pred HHHHHHhccCceEEEEEECCEEEEEECCCCCCCeEEEEeC----------------CCeEEEEECH-----------HHh
Confidence 9999999999999999999999999999999999999861 267888 998 333
Q ss_pred cccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCccc
Q psy240 261 ISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIF 326 (376)
Q Consensus 261 ~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~ 326 (376)
.. ++.+.|++|||||+++++.++....+. +..+++++|+||||||+||||..
T Consensus 200 ~~-----------~~~~~~~~l~pg~~~~i~~~~~~~~~~---~~~~~~~~c~~e~~y~~~~~~~~ 251 (252)
T cd00715 200 DI-----------IGAEFVRDVEPGEIVVIDDDGLESSQR---APKPKPAPCIFEYVYFARPDSVI 251 (252)
T ss_pred cc-----------cCCcEEEEcCCCeEEEEECCceEEEEe---cCCCCCCcceEEEEeecCCcccc
Confidence 22 225679999999999999888776543 23356689999999999999875
No 16
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=6.5e-48 Score=394.31 Aligned_cols=267 Identities=34% Similarity=0.582 Sum_probs=217.6
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||||+++... +...++.||.+|+|||||++|+++.++. .+..+|.+|+++++|++.+++.+.++++|||
T Consensus 1 MCGI~Gi~~~~~------~~~~~~~~L~aLqHRGqdsaGi~~~~~~---~~~~~k~~Glv~~vf~~~~l~~l~g~~~IGH 71 (501)
T PRK09246 1 MCGIVGIVGHSP------VNQSIYDALTVLQHRGQDAAGIVTIDGN---RFRLRKANGLVRDVFRTRHMRRLQGNMGIGH 71 (501)
T ss_pred CceEEEEEcCcC------HHHHHHHHHHHHhccCcceeEEEEEeCC---EEEEEccCCccccccCcchHhhCCCCEEEEE
Confidence 999999998642 3467889999999999999999998863 7899999999999999988888999999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhC-CCCcccCCHHHHHHHHHHhCCCCCC---CCCC
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSR-GVGLSTRSDSELITQALCLNPPDGE---RDGP 176 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~-g~~~~~~tDsE~i~~l~~~~~~~~~---~~g~ 176 (376)
+||||+|.++..|+|||..... ++++++|||+|+|+++||++|... +..|.+.||||+|++++.+++.+.. ....
T Consensus 72 vRysT~G~~~~~n~QP~~~~~~-~g~alahNG~I~N~~eLr~~L~~~~~~~f~s~sDsEvi~~li~~~l~~~~g~~~~~~ 150 (501)
T PRK09246 72 VRYPTAGSSSSAEAQPFYVNSP-YGITLAHNGNLTNAEELRKELFEKDRRHINTTSDSEVLLNVFAHELQKFRGLPLTPE 150 (501)
T ss_pred EcCCcCCCCCcccCCCEEEeCC-CCEEEEEeEEEcCHHHHHHHHHhcCCCeeecCCHHHHHHHHHHHHHHhccccccCcc
Confidence 9999999877789999986333 349999999999999999999876 5678999999999999988754210 0124
Q ss_pred CHHHHHHHHHHhCCcceEEEEE-ECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhh
Q psy240 177 DWPARITHLMKLTPLSYSLVIM-EKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNI 254 (376)
Q Consensus 177 ~~~~~L~~~~~~l~G~fa~v~~-d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~ 254 (376)
++.+++..++++++|+||++++ ++++|+++|||+|+|||||+... ..+++.++| ||+
T Consensus 151 ~l~eai~~~~~~l~Gays~v~~~~~~~l~a~RDp~GirPL~~g~~~-------------~~~~~~~~~ASE~-------- 209 (501)
T PRK09246 151 DIFAAVAAVHRRVRGAYAVVAMIIGHGLVAFRDPHGIRPLVLGKRE-------------TEGGTEYMVASES-------- 209 (501)
T ss_pred CHHHHHHHHHHhcccceeeEEEecCCcEEEEECCCCCCCeEEEeec-------------CCCCCEEEEEECH--------
Confidence 7889999999999999999865 47889999999999999999851 001246888 999
Q ss_pred hhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhH
Q psy240 255 MKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQY 334 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~ 334 (376)
+++.. ++++.|++|+|||+++|++++.. .. .......+...|+|||+||+|||+.+++...++.
T Consensus 210 ---~Al~~-----------~g~~~ir~v~PGeiv~i~~~g~~-~~-~~~~~~~~~~~c~fe~vY~~r~ds~i~g~~vy~~ 273 (501)
T PRK09246 210 ---VALDA-----------LGFEFVRDVAPGEAIYITEDGQL-HT-RQCAENPKLNPCIFEYVYFARPDSIIDGISVYKA 273 (501)
T ss_pred ---HHHHh-----------CCceEEEEeCCCeEEEEECCCcE-eh-hhhcCCCCCcceEEEEEEcCCchhhccCeeHHhh
Confidence 55543 56788999999999999998822 11 1101122335799999999999999888875543
No 17
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=100.00 E-value=8.8e-43 Score=364.20 Aligned_cols=256 Identities=23% Similarity=0.292 Sum_probs=206.4
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|++...... ...+.+..|+.+|+|||||+.|++.. ++++|||
T Consensus 1 McGI~G~~~~~~~~---~~~~~~~~m~~~l~hRGPD~~g~~~~------------------------------~~~~lgh 47 (589)
T TIGR03104 1 MCGICGEIRFDGQA---PDVAAVVRMLAVLAPRGPDAGGVHAQ------------------------------GPVALGH 47 (589)
T ss_pred CcEEEEEEecCCCc---chHHHHHHHHHhhcCCCCCcCCcEec------------------------------CCEEEEE
Confidence 99999999754321 12356889999999999999999853 3589999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+|+++.+.+ ..+.||+.. ++++++++|||+|||+.+|+++|...|+.|.+.||+|+++++|.+| |.++++
T Consensus 48 ~rl~i~~~~-~~~~QP~~~--~~~~~~~v~nGeiyN~~eL~~~l~~~g~~f~~~sD~Evil~~y~~~-------G~~~~~ 117 (589)
T TIGR03104 48 RRLKIIDLS-EASQQPMVD--AELGLALVFNGCIYNYRELRAELEALGYRFFSDGDTEVILKAYHAW-------GRDCVS 117 (589)
T ss_pred EeeEecCCC-cCCCCCeEC--CCCCEEEEECCEecCHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH-------HHHHHH
Confidence 999999874 357899984 6778999999999999999999998899999999999999999999 866666
Q ss_pred HHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
.|+ |.|||+++|. ++|+++|||+|.|||||+.. ++.++| ||. ++|++
T Consensus 118 ~l~-------G~fa~~i~d~~~~~l~laRD~~G~kPLyy~~~-----------------~~~~~faSe~------kaLl~ 167 (589)
T TIGR03104 118 RFN-------GMFAFAIWERDSGRLLLARDRLGIKPLYYAED-----------------AGRLRFASSL------PALLA 167 (589)
T ss_pred Hhh-------cceEEEEEeCCCCEEEEEecCCCCCCeEEEEe-----------------CCEEEEEeCH------HHHHh
Confidence 655 9999999995 59999999999999999886 688999 998 66766
Q ss_pred ccccccccChHHHhhhhC-----------cceEEEeCCCcEEEEecCC-eEEEEEecCCCCCCCceeeeeeeecccCCcc
Q psy240 258 MGMISNIFNDENLKKLKG-----------ARYVREVYPGEILEVSRTG-IKTVSIVRRPDDKPPAFCIFEYVYFARSDSI 325 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~-----------~~~i~~l~pG~~l~i~~~~-~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~ 325 (376)
.+.+.+.+|+.+|.+|+. +++|++|||||+++++.++ ....+||+.+. .+ .++..
T Consensus 168 ~~~~~~~~d~~~l~~~l~~~~~~~~~~T~~~gI~~l~pG~~l~i~~~~~~~~~~yw~~~~-~~------------~~~~~ 234 (589)
T TIGR03104 168 AGGVDTDIDPVALHHYLTFHAVVPAPHTILKGVRKLPPATWMTVEPDGSRTQRSYWSLDA-GR------------PADDA 234 (589)
T ss_pred CCCCCCCcCHHHHHHHHHhcCCCCCCCchhhCceeeCCCcEEEEECCCCeEEEeeccCCC-Cc------------ccccC
Confidence 666678999999998861 6899999999999998654 56778997421 11 11100
Q ss_pred cccchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 326 FEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 326 ~~~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
....+...+.++++|.+||++||.+|+|||+ ++|||.
T Consensus 235 ~~~~~~~~~~l~~~L~~AV~~rl~sd~pvg~------~LSGGl 271 (589)
T TIGR03104 235 ARTEADWQDAILEALRLAVKRRLVADVPVGV------LLSGGL 271 (589)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCCceeE------EecCCc
Confidence 0011122235788999999999999999998 788875
No 18
>PTZ00077 asparagine synthetase-like protein; Provisional
Probab=100.00 E-value=5.8e-41 Score=348.63 Aligned_cols=243 Identities=24% Similarity=0.266 Sum_probs=189.0
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++..... ......+..|+.+|+|||||+.|++..... ..+.+++||
T Consensus 1 MCGI~gi~~~~~~~--~~~~~~~~~m~~~l~HRGPD~~g~~~~~~~-------------------------~~~~~~lgh 53 (586)
T PTZ00077 1 MCGILAIFNSKGER--HELRRKALELSKRLRHRGPDWSGIIVLENS-------------------------PGTYNILAH 53 (586)
T ss_pred CceEEEEEecCCch--hhHHHHHHHHHHHHhCCCCCcCCEEEeccC-------------------------CCCcEEEEe
Confidence 99999999754321 123355778999999999999999864211 013588999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCC-CHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGP-DWP 179 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~-~~~ 179 (376)
.|+++.+... +.|||.. +++++++++||||||+.+|+++|...|+.|.+.||+|+|+++|++| |. ++
T Consensus 54 ~RLsIvd~~~--g~QP~~~--~d~~~~lv~NGEIYN~~eLr~~L~~~g~~f~t~sD~Evil~ly~~~-------G~~~~- 121 (586)
T PTZ00077 54 ERLAIVDLSD--GKQPLLD--DDETVALMQNGEIYNHWEIRPELEKEGYKFSSNSDCEIIGHLYKEY-------GPKDF- 121 (586)
T ss_pred ccceecCCCC--CCCCcCC--CCCCEEEEEEEEEcCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh-------CHHHH-
Confidence 9999999853 7899984 6788999999999999999999988899999999999999999998 76 44
Q ss_pred HHHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhh
Q psy240 180 ARITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMK 256 (376)
Q Consensus 180 ~~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~ 256 (376)
+++|+|.|||+++|. ++++++|||+|+|||||+... ++.++| ||. ++|.
T Consensus 122 ------l~~L~G~FAf~i~D~~~~~l~~aRD~~GikPLyy~~~~----------------~g~~~faSE~------kaL~ 173 (586)
T PTZ00077 122 ------WNHLDGMFATVIYDMKTNTFFAARDHIGIIPLYIGYAK----------------DGSIWFSSEL------KALH 173 (586)
T ss_pred ------HHhcCCCEEEEEEECCCCEEEEEECCCCCcCeEEEEec----------------CCeEEEEecH------HHHH
Confidence 445569999999994 799999999999999998741 467888 998 3332
Q ss_pred cccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCC-cccccchhhhHh
Q psy240 257 GMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSD-SIFEGADSLQYL 335 (376)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~d-s~~~~~~~~~~~ 335 (376)
. . .++|++|||||++.++.+..+..+||+. .... ...+. +..+ ....
T Consensus 174 -----~-----------~-~~~I~~lpPGh~l~~~~~~~~~~~y~~~-~~~~----------~~~~~~~~~~----~~~~ 221 (586)
T PTZ00077 174 -----D-----------Q-CVEVKQFPPGHYYDQTKEKGEFVRYYNP-NWHD----------FDHPIPTGEI----DLEE 221 (586)
T ss_pred -----H-----------h-cCCEEEeCCCcEEEecCCcceeEEecCC-cccc----------cccCCCCHHH----HHHH
Confidence 1 1 4679999999999998665667889963 2100 00111 1111 1235
Q ss_pred hHHHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 336 SVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 336 ~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
++++|++||++||++|+|||+ +||||.
T Consensus 222 lr~~L~~AV~~rl~sdvpvGv------~LSGGL 248 (586)
T PTZ00077 222 IREALEAAVRKRLMGDVPFGL------FLSGGL 248 (586)
T ss_pred HHHHHHHHHHHHhcCCCceEE------EecCCc
Confidence 789999999999999999999 888885
No 19
>PRK09431 asnB asparagine synthetase B; Provisional
Probab=100.00 E-value=9.6e-41 Score=345.52 Aligned_cols=235 Identities=25% Similarity=0.324 Sum_probs=185.2
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++..... ....+.+..|+.+|+|||||+.|++..+ .++|||
T Consensus 1 MCGI~g~~~~~~~~--~~~~~~~~~m~~~l~hRGPD~~g~~~~~------------------------------~~~lgh 48 (554)
T PRK09431 1 MCGIFGILDIKTDA--DELRKKALEMSRLMRHRGPDWSGIYASD------------------------------NAILGH 48 (554)
T ss_pred CceEEEEEcCCCcc--hhHHHHHHHHHHHhhCCCCCcCCEEEeC------------------------------CeEEEE
Confidence 99999999754321 1113567899999999999999998653 478999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+|+++.+.. .+.||+.. .++.+++++||||||+.+|+++|... +.|.+.||+|+|+++|++| |.++
T Consensus 49 ~RLsIid~~--~g~QP~~~--~~~~~~lv~NGEIyN~~eLr~~L~~~-~~f~t~sD~Evil~ly~~~-------G~~~-- 114 (554)
T PRK09431 49 ERLSIVDVN--GGAQPLYN--EDGTHVLAVNGEIYNHQELRAELGDK-YAFQTGSDCEVILALYQEK-------GPDF-- 114 (554)
T ss_pred EEeeecCCC--CCCCCCCc--CCCCEEEEEEEEEecHHHHHHHHhcc-CCcCCCCHHHHHHHHHHHH-------HHHH--
Confidence 999999984 47899974 67889999999999999999999764 7889999999999999998 7544
Q ss_pred HHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
+++|+|.|||+++|. ++++++|||+|+|||||+... ++.++| ||. ++|.
T Consensus 115 -----~~~L~G~FAf~i~D~~~~~l~laRD~~GikPLyy~~~~----------------~~~~~faSE~------kaL~- 166 (554)
T PRK09431 115 -----LDDLDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYDE----------------HGNLYFASEM------KALV- 166 (554)
T ss_pred -----HHhCCCceEEEEEECCCCEEEEEeCCCCCcceEEEEeC----------------CCeEEEecch------HHHH-
Confidence 555679999999995 799999999999999999861 377888 998 3332
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
. . .++|++|||||++.++. + +..+||+.+. .+ + ....+. +.....++
T Consensus 167 ----~-----------~-~~~I~~lpPGh~l~~~~-g-~~~~y~~~~~-~~-------~---~~~~~~----~~~~~~lr 213 (554)
T PRK09431 167 ----P-----------V-CKTIKEFPPGHYYWSKD-G-EFVRYYQRDW-FD-------Y---DAVKDN----VTDKNELR 213 (554)
T ss_pred ----H-----------h-cCCEEEECCCeEEEECC-C-cEEEecCCCc-cc-------c---cccCCH----HHHHHHHH
Confidence 1 1 47799999999999874 4 5678997321 10 0 000111 12223688
Q ss_pred HHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 338 EGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
++|++||++||++|+|||+ +||||.
T Consensus 214 ~~L~~aV~~rl~sdvpvGv------~LSGGL 238 (554)
T PRK09431 214 DALEAAVKKRLMSDVPYGV------LLSGGL 238 (554)
T ss_pred HHHHHHHHHHhcCCCceEE------EcCCCc
Confidence 9999999999999999999 788875
No 20
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=100.00 E-value=1.1e-40 Score=351.82 Aligned_cols=254 Identities=23% Similarity=0.287 Sum_probs=203.2
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++..... ..+ ...+..|+.+|+|||||+.|++.. +.++|||
T Consensus 1 McGI~G~~~~~~~~-~~~-~~~~~~m~~~l~hRGpD~~g~~~~------------------------------~~~~lgh 48 (628)
T TIGR03108 1 MCGITGIFDLTGQR-PID-RDLLRRMNDAQAHRGPDGGGVHVE------------------------------PGIGLGH 48 (628)
T ss_pred CCEEEEEEECCCCc-ccc-HHHHHHHHHHhcCCCCCccCeEee------------------------------CCEEEEE
Confidence 99999999754311 011 256788999999999999998864 2589999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+|+++.+.. .+.||+.. ++++++++|||+|||+.+|+++|...|+.+.+.||+|+++++|++| |.+++
T Consensus 49 ~rl~i~d~~--~~~qP~~~--~~~~~~lv~nGei~N~~eL~~~l~~~g~~~~~~sD~Evi~~~~~~~-------g~~~~- 116 (628)
T TIGR03108 49 RRLSIIDLS--GGQQPLFN--EDGSVVVVFNGEIYNFQELVAELQALGHVFRTRSDTEVIVHAWEEW-------GEACV- 116 (628)
T ss_pred EeeeecCCC--CCCCCcCc--CCCCEEEEECCeECCHHHHHHHHHhcCCccCCCChHHHHHHHHHHH-------HHHHH-
Confidence 999999863 57899984 6788999999999999999999998899999999999999999998 75444
Q ss_pred HHHHHHHhCCcceEEEEEE--CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIME--KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d--~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
++|+|.|||+++| .++++++||++|.+||||+... ++.++| ||. ++++.
T Consensus 117 ------~~l~G~fa~~~~d~~~~~l~~~rD~~G~~PLyy~~~~----------------~~~~~faSe~------~al~~ 168 (628)
T TIGR03108 117 ------ERFRGMFAFALWDRNQETLFLARDRLGIKPLYYALLA----------------DGWFIFGSEL------KALTA 168 (628)
T ss_pred ------HHcCCCEEEEEEECCCCEEEEEECCCCCcceEEEEeC----------------CCEEEEEecH------HHHHh
Confidence 4556999999999 4799999999999999998741 466888 988 55665
Q ss_pred ccccccccChHHHhhhhC----------cceEEEeCCCcEEEEecCC--eEEEEEecCCCCCCCceeeeeeeecccCCcc
Q psy240 258 MGMISNIFNDENLKKLKG----------ARYVREVYPGEILEVSRTG--IKTVSIVRRPDDKPPAFCIFEYVYFARSDSI 325 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~----------~~~i~~l~pG~~l~i~~~~--~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~ 325 (376)
.+.++..+|+++|.+|+. +++|++|||||+++++.++ .+..+||+.+. .+ ..+.+.
T Consensus 169 ~~~~~~~~d~~~l~~~l~~~~~~~~~T~~~gI~~l~pG~~l~~~~~~~~~~~~~yw~~~~-~~-----------~~~~~~ 236 (628)
T TIGR03108 169 HPSLPRELDPLAVEDYFAYGYVPDPRTIFKGVKKLEPGHTLTLRRGAPPARPRCYWDVSF-AP-----------AAPLSE 236 (628)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCchhcCcEEECCCeEEEEECCCcceeccccccCCC-CC-----------CCCCCH
Confidence 555567899999998874 6899999999999999654 45578997421 11 011122
Q ss_pred cccchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 326 FEGADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 326 ~~~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
. ++.+.++++|.+||+.||.+|+|||+ ++|||.
T Consensus 237 ~----e~~e~l~~~l~~aV~~rl~~d~~vg~------~LSGGl 269 (628)
T TIGR03108 237 A----DALAELIERLREAVRSRMVADVPLGA------FLSGGV 269 (628)
T ss_pred H----HHHHHHHHHHHHHHHHHHhcCCcceE------eecCCc
Confidence 1 22335788999999999999999998 778875
No 21
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=100.00 E-value=3.7e-40 Score=310.04 Aligned_cols=222 Identities=27% Similarity=0.356 Sum_probs=181.4
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCC-CCcceEEeCCCc------ceeEEEEecccccccccccccccccCc
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQ-ESAGIVTSEGID------SRRFNIMKGMGMISNIFNDENLKKLKG 94 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~-D~~Gi~~~~~~~------~g~~~~~K~~g~~~~~~~~~~l~~~~~ 94 (376)
|||+|+++..... ++.+.+..||.+|+|||| |++|+++.+..+ .+.+.++|+.|.+.++++..+++.+.+
T Consensus 1 CGI~G~~~~~~~~---~~~~~~~~~l~~lqhRG~~dsaGia~~~~~~~~~~s~~~~~~~~K~~G~~~~v~~~~~~~~~~~ 77 (249)
T cd01907 1 CGIFGIMSKDGEP---FVGALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARRYDLEEYKG 77 (249)
T ss_pred CcEEEEEecCCcc---ccHHHHHHHHHHHHhcCCCCCceEEEEcCCCeEEEecCCCeEEEeeccCHHHHHhhcCchheEE
Confidence 9999999874211 245788899999999999 999999985310 136889999999999988777777889
Q ss_pred cEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCC
Q psy240 95 NLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERD 174 (376)
Q Consensus 95 ~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~ 174 (376)
+++|||+||||+|..+..|+|||.. ++++++|||+|+|+.+||++|...|+.+.+.||||++++++...+.+
T Consensus 78 ~~~igH~R~aT~g~~~~~n~qP~~~----~~~~lvhNG~I~N~~~lr~~L~~~g~~~~~~sDsEvi~~ll~~~~~~---- 149 (249)
T cd01907 78 YHWIAHTRQPTNSAVWWYGAHPFSI----GDIAVVHNGEISNYGSNREYLERFGYKFETETDTEVIAYYLDLLLRK---- 149 (249)
T ss_pred EEEEEEEeccCCCCCCccCCCCeec----CCEEEEeCCeecCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh----
Confidence 9999999999999877779999984 48999999999999999999998899999999999999999764322
Q ss_pred CCC-------------------HHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccC
Q psy240 175 GPD-------------------WPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRG 235 (376)
Q Consensus 175 g~~-------------------~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~ 235 (376)
+.. +.+++..++++|+|+||+++++++.++++|||+|.|||||+..
T Consensus 150 ~g~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~~~~~~~~~RD~~G~rPL~~g~~--------------- 214 (249)
T cd01907 150 GGLPLEYYKHIIRMPEEERELLLALRLTYRLADLDGPFTIIVGTPDGFIVIRDRIKLRPAVVAET--------------- 214 (249)
T ss_pred CCChHHHHHHHhcCCHhHHHHHHHHHHHhCcccCCCCEEEEEEeCCeEEEEecCCCCccEEEEEE---------------
Confidence 223 3345667788999999999999999999999999999999986
Q ss_pred CCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEE
Q psy240 236 QESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEV 290 (376)
Q Consensus 236 ~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i 290 (376)
++.++| ||. +++.... + ...+.+.+++||+++++
T Consensus 215 --~~~~~~ASE~-----------~al~~~~-~-------~~~~~~~~l~pGe~v~~ 249 (249)
T cd01907 215 --DDYVAIASEE-----------CAIREIP-D-------RDNAKVWEPRPGEYVIW 249 (249)
T ss_pred --CCEEEEEEcH-----------HHHhccC-c-------cchheEecCCCCceEeC
Confidence 567888 998 3332200 0 01467889999999863
No 22
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. In humans, GFAT catalyzes the first and rate-limiting step of hexosamine metabolism, the conversion of D-fructose-6P (Fru6P) into D-glucosamine-6P using L-glutamine as a nitrogen source. The end product of this pathway, UDP-N-acetyl glucosamine, is a major building block of the bacterial peptidoglycan and fungal chitin.
Probab=100.00 E-value=1.3e-39 Score=300.12 Aligned_cols=211 Identities=27% Similarity=0.465 Sum_probs=181.0
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT 101 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~ 101 (376)
|||+|+++... ..+.+.+|+.+++|||||++|+++.++ +.+..+|++|.+++++....+..+.++++|||+
T Consensus 1 CGI~G~~~~~~------~~~~~~~~l~~l~hRG~d~~Gi~~~~~---~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~ 71 (215)
T cd00714 1 CGIVGYIGKRE------AVDILLEGLKRLEYRGYDSAGIAVIGD---GSLEVVKAVGKVANLEEKLAEKPLSGHVGIGHT 71 (215)
T ss_pred CEEEEEEcCcc------HHHHHHHHHHHHhccCcCcceEEEEeC---CEEEEEEcCccHHHHHHHhhhccCCccEEEEEE
Confidence 99999998632 246788999999999999999999865 478999999999998876666667889999999
Q ss_pred ccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHH
Q psy240 102 RYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPAR 181 (376)
Q Consensus 102 R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~ 181 (376)
|+||.|..+..|+|||.. .+++++++|||+|+|+++|+++|...|+.+.+.||||+++++|.+++.. +.++.++
T Consensus 72 R~at~g~~~~~n~qPf~~--~~~~~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~sDsEvi~~l~~~~~~~----~~~~~~a 145 (215)
T cd00714 72 RWATHGEPTDVNAHPHRS--CDGEIAVVHNGIIENYAELKEELEAKGYKFESETDTEVIAHLIEYYYDG----GLDLLEA 145 (215)
T ss_pred EccCCCCCCccCCCCCCc--CCCCEEEEEeEEEcCHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc----CCCHHHH
Confidence 999999876789999985 4568999999999999999999998899999999999999999988542 4589999
Q ss_pred HHHHHHhCCcceEEEEEEC---CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 182 ITHLMKLTPLSYSLVIMEK---DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 182 L~~~~~~l~G~fa~v~~d~---~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
++.++++|+|.||++++|. ++|+++|| .|||||+.. ++.++| ||.
T Consensus 146 i~~~~~~l~G~fa~~~~d~~~~~~l~~~RD---~~PL~~~~~-----------------~~~~~~aSE~----------- 194 (215)
T cd00714 146 VKKALKRLEGAYALAVISKDEPDEIVAARN---GSPLVIGIG-----------------DGENFVASDA----------- 194 (215)
T ss_pred HHHHHHHhccceEEEEEEeCCCCEEEEEEC---CCCcEEEEc-----------------CCeEEEEECH-----------
Confidence 9999999999999999983 59999999 599999986 578888 998
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEE
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEV 290 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i 290 (376)
+++.. . ...+..|++|+++++
T Consensus 195 ~al~~-----------~-~~~~~~~~~~~~~~~ 215 (215)
T cd00714 195 PALLE-----------H-TRRVIYLEDGDIAVI 215 (215)
T ss_pred HHHHH-----------h-cCEEEEECCCCEEeC
Confidence 34322 1 356789999998864
No 23
>PLN02549 asparagine synthase (glutamine-hydrolyzing)
Probab=100.00 E-value=5.7e-40 Score=340.45 Aligned_cols=233 Identities=23% Similarity=0.290 Sum_probs=182.6
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++...... ...+.+..|+.+|+|||||+.|++... .++|||
T Consensus 1 MCGI~g~~~~~~~~~--~~~~~~~~m~~~l~hRGPD~~g~~~~~------------------------------~~~Lgh 48 (578)
T PLN02549 1 MCGILAVLGCSDDSQ--AKRSRVLELSRRLRHRGPDWSGLYGNE------------------------------DCYLAH 48 (578)
T ss_pred CCcEEEEEeCCCCcc--hhHHHHHHHHHHhcCcCCCccCEEEeC------------------------------CeEEEE
Confidence 999999997543211 123567789999999999999998643 478999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
.|+++.+.. .+.||+.. .+++++++|||||||+.+|+++|.. +.|.+.||+|+|+++|+++ |.+
T Consensus 49 ~RLsI~d~~--~g~QP~~~--~~~~~~lv~NGEIyN~~eLr~~L~~--~~f~t~sD~Evil~ly~~~-------G~~--- 112 (578)
T PLN02549 49 ERLAIMDPE--SGDQPLYN--EDKTIVVTANGEIYNHKELREKLKL--HKFRTGSDCEVIAHLYEEH-------GEE--- 112 (578)
T ss_pred eeeeEeCCC--CCCCCcCc--CCCCEEEEEEEEEEcHHHHHHHHHh--CCCCCCCHHHHHHHHHHHH-------HHH---
Confidence 999999974 47999984 5778999999999999999999974 7789999999999999998 754
Q ss_pred HHHHHHHhCCcceEEEEEE--CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIME--KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d--~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
++++|+|.|||+++| .++++++|||+|+|||||+... ++.++| ||. ++|.
T Consensus 113 ----~~~~L~G~FAf~i~D~~~~~l~~aRD~~GikPLyyg~~~----------------~g~~~fASE~------KaL~- 165 (578)
T PLN02549 113 ----FVDMLDGMFSFVLLDTRDNSFIAARDHIGITPLYIGWGL----------------DGSVWFASEM------KALC- 165 (578)
T ss_pred ----HHHhCCCceEEEEEECCCCEEEEEECCCCCCCeEEEEec----------------CCeEEEEecH------HHHH-
Confidence 455667999999999 4789999999999999999752 467888 998 3332
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
. . +++|++|||||++.++.++ ..+||+.+.. + +. .+ +..+.. ..++
T Consensus 166 ----~-----------~-~~~I~~lpPGh~l~~~~~~--~~~y~~~~~~-~------~~----~~-~~~~~~----~~lr 211 (578)
T PLN02549 166 ----D-----------D-CERFEEFPPGHYYSSKAGG--FRRWYNPPWF-S------ES----IP-STPYDP----LVLR 211 (578)
T ss_pred ----H-----------H-hCCEEEeCCCeEEEEcCCC--EEEEEecccC-c------cc----cC-CchhHH----HHHH
Confidence 1 1 4679999999999986443 5688863211 0 00 11 111111 2578
Q ss_pred HHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 338 EGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
++|++||++||++|+|+|+ +||||.
T Consensus 212 ~~L~~aV~~rl~sdvpvgv------~LSGGL 236 (578)
T PLN02549 212 EAFEKAVIKRLMTDVPFGV------LLSGGL 236 (578)
T ss_pred HHHHHHHHHHhccCCceeE------eecCCc
Confidence 9999999999999999999 888885
No 24
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-40 Score=339.33 Aligned_cols=238 Identities=27% Similarity=0.388 Sum_probs=194.3
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|++..+... +....+..|...|.|||||..|++.. .++.+||
T Consensus 1 MCGI~g~~~~~~~~---~~~~~~~~m~~~l~hRGPD~~g~~~~------------------------------~~~~~gh 47 (542)
T COG0367 1 MCGIAGILNFKNLI---DAKSIIEEMTKLLRHRGPDDSGVWIS------------------------------LNALLGH 47 (542)
T ss_pred CCceeeeecccccc---cchHHHHHHHHHhhccCCCccccEec------------------------------CCceeee
Confidence 99999999975211 11467889999999999999999973 2588999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
.|+++.+..+ ..||+.. .++++++++||||||+.+||++|..+|+.|.+.+|+|+|+++|++| |.++++
T Consensus 48 ~rL~i~d~~~--g~QP~~~--~~~~~~l~~NGEIYN~~elr~~l~~~g~~f~t~sDtEvil~~y~~~-------g~~~~~ 116 (542)
T COG0367 48 RRLSIVDLSG--GRQPMIK--EGGKYAIVYNGEIYNVEELRKELREAGYEFRTYSDTEVILTLYEEW-------GEDCVE 116 (542)
T ss_pred eEEEEecccc--CCCCccc--CCCcEEEEECCEeeeHHHHHHHHHhcCceeccccchHHHHHHHHHH-------HHHHHH
Confidence 9999999875 7899985 5667999999999999999999999999999999999999999999 777666
Q ss_pred HHHHHHHhCCcceEEEEEE--CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIME--KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d--~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
.|+ |.|||++|| +++|+++|||+|+|||||+.. ++.++| ||. +++..
T Consensus 117 ~l~-------G~fAfai~d~~~~~l~laRD~~GikPLyy~~~-----------------~~~l~faSE~------Kal~~ 166 (542)
T COG0367 117 HLN-------GMFAFAIYDETRQKLFLARDPFGVKPLYYTSK-----------------NENLAFASEI------KALLA 166 (542)
T ss_pred Hhc-------cceEEEEEECCCCEEEEEecCCCccccEEEec-----------------CCceEEEech------hhhhh
Confidence 665 889999999 478999999999999999997 566888 998 45554
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
.+... + +++|++|||||++.++.++. ..+||.... . .++.+. +.....++
T Consensus 167 ~~~~~-----------~-~~~i~~l~pg~~l~~~~~~~-~~~y~~~~~-~------------~~~~~~----~~~~~~l~ 216 (542)
T COG0367 167 HPVVR-----------F-LRDIKELPPGHLLEFTDGGL-IRRYWRLSE-K------------TSKESA----DELAEHLR 216 (542)
T ss_pred CCccc-----------c-cCCeEEcCCCcEEEEcCCCc-eeeeecccc-c------------ccccch----HHHHHHHH
Confidence 42211 2 68999999999999998876 778997421 1 122121 22233678
Q ss_pred HHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 338 EGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
++|.+||++||++|+|||+ +|+||.
T Consensus 217 ~~l~~sV~~r~~advpvg~------~lSGGl 241 (542)
T COG0367 217 SLLEDAVKRRLVADVPVGV------FLSGGL 241 (542)
T ss_pred HHHHHHHHHHhccCCcEEE------EeCCCc
Confidence 9999999999999999999 788874
No 25
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-38 Score=337.01 Aligned_cols=224 Identities=24% Similarity=0.383 Sum_probs=187.0
Q ss_pred cccceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEe--ccccccccccc--cccc--c
Q psy240 18 LTHECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMK--GMGMISNIFND--ENLK--K 91 (376)
Q Consensus 18 ~~~MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K--~~g~~~~~~~~--~~l~--~ 91 (376)
..+||||||+++... +...+..+|.+|+|||||++|+++.++. +.+.++| +.|++++++++ ..++ .
T Consensus 21 ~~~MCGI~G~~~~~~------~~~~~~~~l~~L~hRG~ds~Gia~~~~~--~~~~~~k~~g~g~v~~~~~~~~~~~~~~~ 92 (640)
T PTZ00295 21 YDYCCGIVGYLGNED------ASKILLEGIEILQNRGYDSCGISTISSG--GELKTTKYASDGTTSDSIEILKEKLLDSH 92 (640)
T ss_pred cccCCeEEEEEcCcc------hHHHHHHHHHHHHhcCCCeeEEEEEeCC--CcEEEEEeCCCCchHHHHHHHHHHhhcCC
Confidence 456999999998643 4577889999999999999999998743 3678888 56778887765 3332 5
Q ss_pred cCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCC
Q psy240 92 LKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDG 171 (376)
Q Consensus 92 ~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~ 171 (376)
+.++++|||+||||+|..+..|+|||.. ..++++++|||+|+|+.+||++|..+|+.|.+.||||+|++++...+..
T Consensus 93 ~~~~~~igH~R~at~g~~~~~n~qP~~~--~~~~~~~vhNG~I~N~~~Lr~~L~~~g~~f~s~tDsEvi~~li~~~~~~- 169 (640)
T PTZ00295 93 KNSTIGIAHTRWATHGGKTDENAHPHCD--YKKRIALVHNGTIENYVELKSELIAKGIKFRSETDSEVIANLIGLELDQ- 169 (640)
T ss_pred CCCcEEEEEeccccCCCCCcCCCCCCCC--CCCCEEEEEEEEEcCHHHHHHHHHHCCCcccCCChHHHHHHHHHHHHhc-
Confidence 6789999999999999877789999984 4678999999999999999999999999999999999999998765432
Q ss_pred CCCCCCHHHHHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCC
Q psy240 172 ERDGPDWPARITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGI 247 (376)
Q Consensus 172 ~~~g~~~~~~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l 247 (376)
|.++.+++..++++|+|.||+++++ +++|+++||+ |||||+.. ++.++| ||+
T Consensus 170 ---g~~~~~a~~~~~~~l~G~~a~~~~~~~~~~~l~~~Rd~---~PL~~g~~-----------------~~~~~~aSE~- 225 (640)
T PTZ00295 170 ---GEDFQEAVKSAISRLQGTWGLCIIHKDNPDSLIVARNG---SPLLVGIG-----------------DDSIYVASEP- 225 (640)
T ss_pred ---CCCHHHHHHHHHHHhhhhceEEEEEeCCCCEEEEEECC---CceEEEEc-----------------CceEEEEech-
Confidence 6689999999999999999999998 4799999996 99999986 467888 998
Q ss_pred ccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEE
Q psy240 248 DSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTV 298 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~ 298 (376)
+++.. ++ ..+..|+||+++.+++++++.+
T Consensus 226 ----------~al~~-----------~~-~~~~~l~pGei~~i~~~~~~~~ 254 (640)
T PTZ00295 226 ----------SAFAK-----------YT-NEYISLKDGEIAELSLENVNDL 254 (640)
T ss_pred ----------HHHHh-----------hC-cEEEEeCCCeEEEEECCeEEEE
Confidence 44432 22 3455799999999998887653
No 26
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=100.00 E-value=1.3e-38 Score=325.23 Aligned_cols=250 Identities=23% Similarity=0.270 Sum_probs=198.2
Q ss_pred EEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEecc
Q psy240 24 VFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHTRY 103 (376)
Q Consensus 24 I~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~R~ 103 (376)
|+|++.....+. ...+.+..|+.+|+|||||+.|++..+ ++++|||+|+
T Consensus 1 i~g~~~~~~~~~--~~~~~~~~m~~~l~hRGPD~~g~~~~~-----------------------------~~~~lgh~rl 49 (467)
T TIGR01536 1 IAGFFDLDDKAV--EEDEAILRMSDTIAHRGPDASGIEYKD-----------------------------GNAILGHRRL 49 (467)
T ss_pred CEEEEecCCcch--hhHHHHHHHHHHhhCcCCCcCCcEEcc-----------------------------CCEEEEEEEe
Confidence 678887654321 113468899999999999999987222 3689999999
Q ss_pred ccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHHHH
Q psy240 104 STSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARIT 183 (376)
Q Consensus 104 at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~L~ 183 (376)
++.+... +.||+.. .++++++++||+|||+.+|+++|...|+.|.+.||+|+++++|.+| |.+
T Consensus 50 ~i~d~~~--~~qP~~~--~~~~~~lv~nGeiyN~~eL~~~l~~~g~~~~~~~D~e~il~~y~~~-------g~~------ 112 (467)
T TIGR01536 50 AIIDLSG--GAQPMSN--EGKTYVIVFNGEIYNHEELREELEAKGYTFQTDSDTEVILHLYEEW-------GEE------ 112 (467)
T ss_pred EEeCCCC--CCCeeEC--CCCCEEEEEeeEEcCHHHHHHHHHhcCCccCCCCHHHHHHHHHHHH-------HHH------
Confidence 9999853 5899984 5778999999999999999999998899999999999999999998 744
Q ss_pred HHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhccc-
Q psy240 184 HLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMG- 259 (376)
Q Consensus 184 ~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~- 259 (376)
++++++|.|||+++|. ++|+++||++|.|||||+.. ++.++| ||. ++|...+
T Consensus 113 -~~~~l~G~fa~~i~D~~~~~l~laRD~~G~kPLyy~~~-----------------~~~~~faSe~------kaL~~~~~ 168 (467)
T TIGR01536 113 -CVDRLDGMFAFALWDSKKGELFLARDRFGIKPLYYAYD-----------------GGQLYFASEI------KALLAHPR 168 (467)
T ss_pred -HHHHcCCcEEEEEEECCCCEEEEEECCCCCcCeEEEEE-----------------CCEEEEEecH------HHHHhccc
Confidence 4555679999999996 89999999999999999986 688999 998 5666555
Q ss_pred ccccccChHHHhhhhC----------cceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccc
Q psy240 260 MISNIFNDENLKKLKG----------ARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGA 329 (376)
Q Consensus 260 ~~~~~~~~~~l~~~l~----------~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~ 329 (376)
.+...+|.+++.+++. +++|++|||||+++++.++....++|+.+. .+ ...+..+
T Consensus 169 ~~~~~~d~~~l~~~l~~~~~~~~~T~~~~I~~l~pG~~l~~~~~~~~~~~~~~~~~-~~------------~~~~~~~-- 233 (467)
T TIGR01536 169 NIKPFPDGAALAPGFGFVRVPPPSTFFRGVFELEPGHDLPLEDDGLNIERYYWERR-DE------------HTDSEED-- 233 (467)
T ss_pred cCcCCCCHHHHHHHhccCccCCCCcccCCcEEcCCCeEEEEeCCCceEEEEecCCC-CC------------CCCCHHH--
Confidence 4567899999998874 689999999999999977644444444221 10 1112212
Q ss_pred hhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 330 DSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 330 ~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
+.+.++++|.+||++|+++|+|||+ ++|||.
T Consensus 234 --~~e~l~~~l~~aV~~r~~~~~~vg~------~LSGGl 264 (467)
T TIGR01536 234 --LVDELRSLLEDAVKRRLVADVPVGV------LLSGGL 264 (467)
T ss_pred --HHHHHHHHHHHHHHHHhccCCceEE------EecCCh
Confidence 2235788999999999999999998 788875
No 27
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed
Probab=100.00 E-value=1.7e-38 Score=333.87 Aligned_cols=221 Identities=28% Similarity=0.458 Sum_probs=190.5
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||||+++... ..+.+..||.+|+|||||++|+++.++ +.+.++|++|.+.+++....++++.++++|||
T Consensus 1 MCGI~g~~~~~~------~~~~~~~~l~~l~hRG~d~~Gi~~~~~---~~~~~~k~~g~~~~~~~~~~~~~~~g~~~igH 71 (604)
T PRK00331 1 MCGIVGYVGQRN------AAEILLEGLKRLEYRGYDSAGIAVLDD---GGLEVRKAVGKVANLEAKLEEEPLPGTTGIGH 71 (604)
T ss_pred CcEEEEEEcCcc------HHHHHHHHHHHHhccCcCcceEEEEeC---CEEEEEECCcCHHHHHhhhccccCCCcEEEEE
Confidence 999999997642 346788999999999999999999875 47899999999988877655566789999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+||+|+|.++..|+|||.. +.++++++|||+|+|+++||++|..+|+.+.+.||||+++++|.+++++ |.++.+
T Consensus 72 ~R~at~g~~~~~n~qP~~~--~~~~~~~vhNG~I~N~~~Lr~~l~~~g~~~~~~sDsEvi~~l~~~~~~~----g~~~~~ 145 (604)
T PRK00331 72 TRWATHGKPTERNAHPHTD--CSGRIAVVHNGIIENYAELKEELLAKGHVFKSETDTEVIAHLIEEELKE----GGDLLE 145 (604)
T ss_pred EecCCCCCCccccCCcccc--CCCCEEEEEeEEEcCHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHhh----CCCHHH
Confidence 9999999876789999984 5688999999999999999999998899999999999999999887553 568999
Q ss_pred HHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhh
Q psy240 181 RITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMK 256 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~ 256 (376)
++..++++|+|.|||+++| +++|+++||+ |||||+.. +++++| ||+
T Consensus 146 a~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~PL~~g~~-----------------~~~~~~aSE~---------- 195 (604)
T PRK00331 146 AVRKALKRLEGAYALAVIDKDEPDTIVAARNG---SPLVIGLG-----------------EGENFLASDA---------- 195 (604)
T ss_pred HHHHHHHhccCeeEEEEEecCCCCEEEEEECC---CceEEEEc-----------------CCeEEEEECH----------
Confidence 9999999999999999999 4799999994 99999986 577888 998
Q ss_pred cccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEE
Q psy240 257 GMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVS 299 (376)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~ 299 (376)
+++.. + ...++.|+||++++|+.+++++.+
T Consensus 196 -~al~~-----------~-~~~~~~l~pg~~~~i~~~~~~~~~ 225 (604)
T PRK00331 196 -LALLP-----------Y-TRRVIYLEDGEIAVLTRDGVEIFD 225 (604)
T ss_pred -HHHHH-----------h-cCEEEEECCCeEEEEECCeEEEEe
Confidence 34322 2 356799999999999988876543
No 28
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.
Probab=100.00 E-value=4.7e-38 Score=290.81 Aligned_cols=207 Identities=27% Similarity=0.397 Sum_probs=178.6
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT 101 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~ 101 (376)
|||+|+++.+... ...+.+..|+.+|+|||||++|++... +++|||+
T Consensus 1 cGI~g~~~~~~~~---~~~~~~~~~~~~l~hRGpd~~~~~~~~------------------------------~~~lgh~ 47 (220)
T cd00712 1 CGIAGIIGLDGAS---VDRATLERMLDALAHRGPDGSGIWIDE------------------------------GVALGHR 47 (220)
T ss_pred CeEEEEEeCCCCc---chHHHHHHHHHHHhccCCCCCCEEEEC------------------------------CEEEEEE
Confidence 9999999864311 234678899999999999999998653 5889999
Q ss_pred ccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHH
Q psy240 102 RYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPAR 181 (376)
Q Consensus 102 R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~ 181 (376)
|++|.|.. .+.||+.. .+++++++|||+|||+.+|+++|...++.+.+.||+|+++++|.++ |.++
T Consensus 48 rl~~~~~~--~~~qP~~~--~~~~~~~~~nG~i~N~~~L~~~l~~~~~~~~~~sD~e~l~~~~~~~-------g~~~--- 113 (220)
T cd00712 48 RLSIIDLS--GGAQPMVS--EDGRLVLVFNGEIYNYRELRAELEALGHRFRTHSDTEVILHLYEEW-------GEDC--- 113 (220)
T ss_pred eeeecCcc--cCCCCeEe--CCCCEEEEEEEEEeCHHHHHHHHHhcCCcCCCCChHHHHHHHHHHH-------hHHH---
Confidence 99999975 68999985 4578999999999999999999988888889999999999999998 7444
Q ss_pred HHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcc
Q psy240 182 ITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGM 258 (376)
Q Consensus 182 L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~ 258 (376)
+++++|+||++++|. ++++++||++|.+||||+.. ++.++| ||. +.|...
T Consensus 114 ----~~~l~G~fa~vi~d~~~~~l~~~rD~~G~~pLy~~~~-----------------~~~~~~aSe~------~~l~~~ 166 (220)
T cd00712 114 ----LERLNGMFAFALWDKRKRRLFLARDRFGIKPLYYGRD-----------------GGGLAFASEL------KALLAL 166 (220)
T ss_pred ----HHHhhheEEEEEEECCCCEEEEEECCCCCEeeEEEEE-----------------CCEEEEEcch------HHHHhc
Confidence 445569999999995 89999999999999999986 578888 898 666666
Q ss_pred cccccccChHHHhhhhC----------cceEEEeCCCcEEEEecCCeEEEEEec
Q psy240 259 GMISNIFNDENLKKLKG----------ARYVREVYPGEILEVSRTGIKTVSIVR 302 (376)
Q Consensus 259 ~~~~~~~~~~~l~~~l~----------~~~i~~l~pG~~l~i~~~~~~~~~y~~ 302 (376)
+.++..+|++.+.+|+. +++|++|||||++++++++.+..+||+
T Consensus 167 ~~~~~~~d~~~l~~~l~~~~~~~~~T~~~~V~~l~pG~~l~~~~~~~~~~~yw~ 220 (220)
T cd00712 167 PGVPRELDEAALAEYLAFQYVPAPRTIFKGIRKLPPGHYLTVDPGGVEIRRYWD 220 (220)
T ss_pred CCCCCCcCHHHHHHHHhcCCCCCCCchhcCceEECCceEEEEECCCeEEeeeCC
Confidence 66678999999999873 689999999999999988888899994
No 29
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing). The member from Methanococcus jannaschii contains an intein.
Probab=100.00 E-value=5.3e-37 Score=322.69 Aligned_cols=219 Identities=27% Similarity=0.431 Sum_probs=188.2
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEEe
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGHT 101 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH~ 101 (376)
|||+|+++... ..+.+.+||.+|+|||||++|+++.++ +.+.++|++|.+.++++...++++.++++|||+
T Consensus 1 CGI~g~~~~~~------~~~~~~~~l~~l~hRG~ds~Gi~~~~~---~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~ 71 (607)
T TIGR01135 1 CGIVGYIGQRD------AVPILLEGLKRLEYRGYDSAGIAVVDE---GKLFVRKAVGKVQELANKLGEKPLPGGVGIGHT 71 (607)
T ss_pred CeEEEEECCcc------HHHHHHHHHHHHhccCcccceEEEEeC---CEEEEEECCcCHHHHHhhhhcccCCccEEEEEe
Confidence 99999998432 346788999999999999999999874 378999999999998876656667899999999
Q ss_pred ccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHH
Q psy240 102 RYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPAR 181 (376)
Q Consensus 102 R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~ 181 (376)
||||+|..+..|+|||.. ++++++++|||+|+|+++||++|...|+.+.+.||||+++++|.+++.+ |.++.++
T Consensus 72 R~at~g~~~~~n~qP~~~--~~~~~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~tDsEvi~~l~~~~~~~----~~~~~~a 145 (607)
T TIGR01135 72 RWATHGKPTEENAHPHTD--EGGRIAVVHNGIIENYAELREELEARGHVFVSDTDTEVIAHLIEEYLRE----GGDLLEA 145 (607)
T ss_pred eccCCCCCCccCCCCcCc--CCCCEEEEEecccCCHHHHHHHHHhCCCccccCCHHHHHHHHHHHHHhc----CCCHHHH
Confidence 999999876789999984 5678999999999999999999998899999999999999999988542 5689999
Q ss_pred HHHHHHhCCcceEEEEEEC---CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 182 ITHLMKLTPLSYSLVIMEK---DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 182 L~~~~~~l~G~fa~v~~d~---~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
+..++++|+|.|||+++|. ++|+++||+ |||||+.. ++.++| ||+
T Consensus 146 i~~~~~~l~G~~a~~i~~~~~~~~l~~~Rd~---~PL~~~~~-----------------~~~~~~aSE~----------- 194 (607)
T TIGR01135 146 VQKALKQLRGAYALAVLHADHPETLVAARSG---SPLIVGLG-----------------DGENFVASDV----------- 194 (607)
T ss_pred HHHHHHHhcCceEEEEEecCCCCEEEEEECC---CceEEEEC-----------------CCeEEEEECh-----------
Confidence 9999999999999999983 569999994 99999985 567888 998
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEE
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTV 298 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~ 298 (376)
+++.. + ...|..|+||+++.+++++.++.
T Consensus 195 ~al~~-----------~-~~~~~~l~pg~~~~~~~~~~~~~ 223 (607)
T TIGR01135 195 TALLP-----------V-TRRVIYLEDGDIAILTRDGVRIY 223 (607)
T ss_pred HHHHh-----------h-CCEEEEeCCCeEEEEECCeeEEE
Confidence 44432 2 25678999999999998887654
No 30
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase
Probab=100.00 E-value=6.6e-37 Score=324.15 Aligned_cols=251 Identities=21% Similarity=0.339 Sum_probs=188.1
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCc--ceeEEEEeccc----ccccccc---ccccc-
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGID--SRRFNIMKGMG----MISNIFN---DENLK- 90 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~--~g~~~~~K~~g----~~~~~~~---~~~l~- 90 (376)
||||||+++........++.++++.+|.+|+|||+|++||++.++.. ...+.++|+.| +.++++. +..++
T Consensus 1 mCGI~g~~~~~~~~~~~~~~~~l~~gL~~Lq~RG~dsaGia~~~~~~~~~~~~~~~k~~G~~~~l~~~~~~~~~~~~l~~ 80 (680)
T PLN02981 1 MCGIFAYLNYNVPRERRFILEVLFNGLRRLEYRGYDSAGIAIDNDPSLESSSPLVFREEGKIESLVRSVYEEVAETDLNL 80 (680)
T ss_pred CceEEEEEccCCccccccHHHHHHHHHHHHhcCCcccceEEEEcCCcccccceEEEEcCCCHHHHHHHHhhhcccccccc
Confidence 99999999853100011467889999999999999999999987420 00278999999 5555653 33343
Q ss_pred --ccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCC
Q psy240 91 --KLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNP 168 (376)
Q Consensus 91 --~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~ 168 (376)
.+.++++|||+||||+|..+..|+|||... ..+.++++|||+|+|+.+||++|..+|+.|.+.||||+|++++.+..
T Consensus 81 ~~~~~g~~~IGH~R~at~g~~~~~n~qP~~~~-~~~~ialvhNG~I~N~~eLr~~L~~~G~~f~s~tDtEvi~~li~~~~ 159 (680)
T PLN02981 81 DLVFENHAGIAHTRWATHGPPAPRNSHPQSSG-PGNEFLVVHNGIITNYEVLKETLLRHGFTFESDTDTEVIPKLAKFVF 159 (680)
T ss_pred ccCCCCcEEEEEcccccCCCCCcCCCCCcccC-CCCcEEEEECceEecHHHHHHHHHhCCCeeccCCHHHHHHHHHHHHH
Confidence 568999999999999998777899999852 35789999999999999999999999999999999999999965432
Q ss_pred CCCCCC-C-CCHHHHHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEecCCCC-----C-Cccccc--ccC
Q psy240 169 PDGERD-G-PDWPARITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKILPMKG-----S-QSTVFD--FRG 235 (376)
Q Consensus 169 ~~~~~~-g-~~~~~~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~~~~~~-----~-~~~~~~--~~~ 235 (376)
...... + .++.+++..++++|+|+|||++++ +++++++||+ +||+++.....++ . -++.+. -++
T Consensus 160 ~~~~~~~~~~~~~~a~~~~~~~l~G~ya~~i~~~~~~~~i~~~r~~---~PL~iG~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (680)
T PLN02981 160 DKLNEEEGDVTFSQVVMEVMRQLEGAYALIFKSPHYPNELVACKRG---SPLLLGVKELPEEKNSSAVFTSEGFLTKNRD 236 (680)
T ss_pred HhcccccCCCCHHHHHHHHHHhccCccceEEEecCCCCeEEEEecC---CceEEEecCcccccccccccccccccccccc
Confidence 211111 1 278999999999999999999998 6999999994 9999998510000 0 000000 000
Q ss_pred CCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEE
Q psy240 236 QESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVS 299 (376)
Q Consensus 236 ~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~ 299 (376)
+++.+++ ||. +++.. + .+.++.|+||++++|++++.++.+
T Consensus 237 -~~~~~~~aSe~-----------~al~~-----------~-~~~~~~l~~gei~~i~~~~~~~~~ 277 (680)
T PLN02981 237 -KPKEFFLASDA-----------SAVVE-----------H-TKRVLVIEDNEVVHLKDGGVGIYK 277 (680)
T ss_pred -cCCcEEEEeCH-----------HHHHH-----------h-cCEEEEECCCeEEEEECCeEEEEe
Confidence 0135777 998 55533 3 578999999999999998877655
No 31
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.8e-36 Score=308.34 Aligned_cols=215 Identities=27% Similarity=0.395 Sum_probs=184.5
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++... ++.++|.++|++|++||+|++|+++.++ |.+.+.|..|.++++-......++.+.++|||
T Consensus 1 MCGIvG~i~~~~-----~~~~il~~gL~rLEYRGYDSaGiav~~~---~~l~~~k~~Gkv~~l~~~~~~~~~~~~~gIgH 72 (597)
T COG0449 1 MCGIVGYIGFLR-----EAIDILLEGLKRLEYRGYDSAGIAVVGD---GSLNVRKQVGKISNLEELLNKEPLIGGVGIAH 72 (597)
T ss_pred CCcEEEEEcCCc-----cHHHHHHHHHHHHHccCCCcccEEEEeC---CeEEEEEccCCHHHHHhhhcccccCCceeeee
Confidence 999999997543 3568899999999999999999999976 58999999999998722223344789999999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+||||+|.++..|+||+. ++++++||||.|.||.+||++|..+|+.|.++||||+|.||+++.+++ + +++
T Consensus 73 TRWATHG~P~~~NAHPh~----~~~~avVHNGIIeN~~eLr~eL~~~G~~F~S~TDTEVi~hLi~~~~~~----~--~~~ 142 (597)
T COG0449 73 TRWATHGGPTRANAHPHS----DGEFAVVHNGIIENFAELKEELEAKGYVFKSDTDTEVIAHLLEEIYDT----S--LLE 142 (597)
T ss_pred ccccCCCCCCcCCCCCCC----CCCEEEEeCchhhCHHHHHHHHHhcCCEEecCCchHHHHHHHHHHHHh----H--HHH
Confidence 999999999999999996 388999999999999999999999999999999999999999988642 3 999
Q ss_pred HHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhh
Q psy240 181 RITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMK 256 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~ 256 (376)
+++.++++|+|+||+++.+ +++|+++|. ..||+++.. ++..++ |..
T Consensus 143 a~~~~l~~l~Gsyal~~~~~~~p~~i~~ar~---~sPL~iG~g-----------------~~e~f~aSD~---------- 192 (597)
T COG0449 143 AVKKVLKRLEGSYALLCTHSDFPDELVAARK---GSPLVIGVG-----------------EGENFLASDV---------- 192 (597)
T ss_pred HHHHHHHHhcceeEEEEEecCCCCeEEEEcC---CCCeEEEec-----------------CCcceEecCh----------
Confidence 9999999999999999997 479999998 699999995 344444 887
Q ss_pred cccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeE
Q psy240 257 GMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIK 296 (376)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~ 296 (376)
.++.+ . .+.+..|++|++.++++++..
T Consensus 193 -~a~l~-----------~-t~~~~~l~dgd~~~~~~~~v~ 219 (597)
T COG0449 193 -SALLN-----------F-TRRFVYLEEGDIAKLTTDGVS 219 (597)
T ss_pred -hhhhh-----------h-hceEEEeCCCCEEEEECCcEE
Confidence 34422 2 467889999999999988865
No 32
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-35 Score=312.73 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=185.3
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCC------Cc------ceeEEEEeccccccc----cc
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEG------ID------SRRFNIMKGMGMISN----IF 84 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~------~~------~g~~~~~K~~g~~~~----~~ 84 (376)
||||||+++.....+..++.+.+..+|.+|+|||+|++||++.++ ++ .+.+.++|..|.+++ +|
T Consensus 1 mCGI~g~~~~~~~~~~~~~~~~~~~gL~~Le~RG~dsaGia~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~v~~l~~~~~ 80 (670)
T PTZ00394 1 MCGIFGYANHNVPRTVEQILNVLLDGIQKVEYRGYDSAGLAIDANIGSEKEDGTAASAPTPRPCVVRSVGNISQLREKVF 80 (670)
T ss_pred CceEEEEECCCCccccccHHHHHHHHHHHHhccCcccceEEEecCcccccccccccccCCCcEEEEECCccHHHHHHHHh
Confidence 999999998641001114668899999999999999999998521 01 135889999999976 55
Q ss_pred cccccc-------ccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHH
Q psy240 85 NDENLK-------KLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDS 157 (376)
Q Consensus 85 ~~~~l~-------~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDs 157 (376)
++..+. .+.++++|||+||||+|.++..|+||+.. .+++++++|||+|+|+.+||++|..+|+.|.++|||
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~igH~R~at~g~~~~~n~qP~~~--~~~~i~vvhNG~I~N~~eLr~~L~~~g~~f~s~tDt 158 (670)
T PTZ00394 81 SEAVAATLPPMDATTSHHVGIAHTRWATHGGVCERNCHPQQS--NNGEFTIVHNGIVTNYMTLKELLKEEGYHFSSDTDT 158 (670)
T ss_pred cchhhhhccccccCCCCCEEEEEeeceecCCCCcCCCCCcCC--CCCCEEEEECeeEecHHHHHHHHHHcCCEecCCChH
Confidence 543222 45789999999999999877789999984 578899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC-CHHHHHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEecC---CCCCCccc
Q psy240 158 ELITQALCLNPPDGERDGP-DWPARITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKILP---MKGSQSTV 230 (376)
Q Consensus 158 E~i~~l~~~~~~~~~~~g~-~~~~~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~~~---~~~~~~~~ 230 (376)
|+|++++...+.+ .|. ++.+++..++++|+|+|||++.. +++|+++||+ +||+++.... .+-+.+.+
T Consensus 159 Evi~~li~~~~~~---~g~~~~~~a~~~~~~~l~G~ya~~i~~~~~~~~l~~~Rd~---~PL~iG~~~~~~~~~~~~~~~ 232 (670)
T PTZ00394 159 EVISVLSEYLYTR---KGIHNFADLALEVSRMVEGSYALLVKSVYFPGQLAASRKG---SPLMVGIRRTDDRGCVMKLQT 232 (670)
T ss_pred HHHHHHHHHHHHh---cCCCCHHHHHHHHHHHccCceEEEEEecCCCCEEEEEEcC---CceEEEecccccccccccccc
Confidence 9999886543221 143 89999999999999999999985 6999999997 9999998520 00000000
Q ss_pred ccccC-CCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEE
Q psy240 231 FDFRG-QESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTV 298 (376)
Q Consensus 231 ~~~~~-~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~ 298 (376)
.++-+ ..++.+++ ||. .++.. + .+.+..|++|++..+++++..+.
T Consensus 233 ~~~~~~~~~~~~~~aSd~-----------~a~~~----------~--t~~~~~l~dg~~~~~~~~~~~~~ 279 (670)
T PTZ00394 233 YDLTDLSGPLEVFFSSDV-----------NSFAE----------Y--TREVVFLEDGDIAHYCDGALRFY 279 (670)
T ss_pred ccccccCCCCcEEEEeCh-----------HHHHH----------h--hceEEEecCCeEEEEECCEEEEE
Confidence 00000 00135666 887 34322 1 47788999999999987765443
No 33
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthetase B synthesizes asparagine from aspartate and glutamine. Beta-LS catalyzes the format
Probab=100.00 E-value=1.5e-34 Score=265.64 Aligned_cols=215 Identities=33% Similarity=0.504 Sum_probs=175.4
Q ss_pred eEEEEEEeCCCCCCccchHHHH--HHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEE
Q psy240 22 CGVFACVSTGTWPTQIDVAHTI--CMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIG 99 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l--~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~ig 99 (376)
|||+|+++...... ...+ ..++..++|||||++|+++.+.. ....+|..+...+.......+.+.+.++||
T Consensus 1 Cgi~g~~~~~~~~~----~~~~~~~~~~~~~~~rg~dg~Gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 73 (220)
T cd00352 1 CGIFGIVGADGAAS----LLLLLLLRGLAALEHRGPDGAGIAVYDGD---GLFVEKRAGPVSDVALDLLDEPLKSGVALG 73 (220)
T ss_pred CEEEEEECCCCcch----hhHHHHHHHHHhhcccCCccCCeEEECCC---ceEEEEeccchhhhhhhhhhhccCCCEEEE
Confidence 99999998764321 1122 46899999999999999998753 455566666665555555556678899999
Q ss_pred EeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHH
Q psy240 100 HTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWP 179 (376)
Q Consensus 100 H~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~ 179 (376)
|+|++|+|..+..|+|||.. ..++++++|||+|+|+++|+++|...+..+.+.||||+++++|.+++.+ + .+.
T Consensus 74 H~R~at~g~~~~~n~hPf~~--~~~~~~~~hNG~i~n~~~l~~~l~~~~~~~~~~tDse~i~~~~~~~~~~----~-~~~ 146 (220)
T cd00352 74 HVRLATNGLPSEANAQPFRS--EDGRIALVHNGEIYNYRELREELEARGYRFEGESDSEVILHLLERLGRE----G-GLF 146 (220)
T ss_pred EeEeeecCCCCCCCCCCcCc--CCCCEEEEECcEEEcHHHHHHHHHHCCCeecCCCHHHHHHHHHHHHhcc----C-CHH
Confidence 99999999877889999985 2368999999999999999999988888889999999999999999653 2 288
Q ss_pred HHHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhh
Q psy240 180 ARITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMK 256 (376)
Q Consensus 180 ~~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~ 256 (376)
+++..++++++|+|+++++|+ ++++++||+.|.+||||+... ++.++| ||+
T Consensus 147 ~~~~~~~~~~~G~~~~~~~d~~~~~l~~~rd~~G~~pL~~~~~~----------------~~~~~~aSe~---------- 200 (220)
T cd00352 147 EAVEDALKRLDGPFAFALWDGKPDRLFAARDRFGIRPLYYGITK----------------DGGLVFASEP---------- 200 (220)
T ss_pred HHHHHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEeC----------------CCeEEEEecH----------
Confidence 999999999999999999997 999999999999999999861 477888 998
Q ss_pred cccccccccChHHHhhhhCcceEEEeCCCcEE
Q psy240 257 GMGMISNIFNDENLKKLKGARYVREVYPGEIL 288 (376)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l 288 (376)
.++.. ++++.|.+|+||+++
T Consensus 201 -~~~~~-----------~~~~~~~~l~~g~~~ 220 (220)
T cd00352 201 -KALLA-----------LPFKGVRRLPPGELL 220 (220)
T ss_pred -HHHhh-----------cCcccEEECCCCCCC
Confidence 23211 113679999999864
No 34
>TIGR03442 conserved hypothetical protein TIGR03442. Members of this strictly bacterial protein family show similarity to class II glutamine amidotransferases (see Pfam family pfam00310). They are distinguished by appearing in a genome context with, and usually adjacent to or between, members of families TIGR03438 (an uncharacterized methyltransferase) and TIGR03440 (an uncharacterized protein).
Probab=100.00 E-value=1.3e-32 Score=258.65 Aligned_cols=218 Identities=17% Similarity=0.156 Sum_probs=169.0
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCC------------CCcceEEeCCCcceeEEEEeccccccc--cccc
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQ------------ESAGIVTSEGIDSRRFNIMKGMGMISN--IFND 86 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~------------D~~Gi~~~~~~~~g~~~~~K~~g~~~~--~~~~ 86 (376)
||||+|+++.+. .+.++|.....+|.+|+. ||||++++++...+...++|.++.+.+ .+..
T Consensus 1 MCr~~gy~g~~~-----~l~~~l~~~~~sL~~qs~~~~~~~~~~~~~DGwGia~~~~~~~~~~~~~k~~~pa~~d~~l~~ 75 (251)
T TIGR03442 1 MCRHLAYLGAPV-----SLADLLLDPPHSLLVQSYQPREMRHGLVNADGFGVGWYDSGKDTVPFRYRSTQPIWNDINFAS 75 (251)
T ss_pred CceEeeecCCCe-----eHHHheeCCCcchHHhCcchhhhcCCCcCCCcceEEEecCCCCCCceEEeCCCccccChhHHH
Confidence 999999998642 245667776677766654 999999987531125778888776533 2222
Q ss_pred ccccccCccEEEEEeccccCCC-CCCCCCCCceeecCCCcEEEEEEeeecChH-----HHHHHHHhCCC-CcccCCHHHH
Q psy240 87 ENLKKLKGNLGIGHTRYSTSAA-SEEVNCQPFVVHTAHGVLAVAHNGEIVNAE-----RLRRMVLSRGV-GLSTRSDSEL 159 (376)
Q Consensus 87 ~~l~~~~~~~~igH~R~at~g~-~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~-----~L~~~L~~~g~-~~~~~tDsE~ 159 (376)
..+.+.+.++|+|+|+||.|. .+..|+|||.. ++|+|+|||.|.|++ +|+.+|...++ .+.+.||||+
T Consensus 76 -l~~~~~s~~~i~HvR~AT~G~~~~~~N~hPf~~----g~~~~aHNG~i~n~~~~~r~~L~~~l~~~~~~~~~g~TDSE~ 150 (251)
T TIGR03442 76 -LARYVESGCVLAAVRSATVGMAIDESACAPFSD----GRWLFSHNGFVDNFRQTLYRPLRDRLPDIFYLAIEGSTDSAH 150 (251)
T ss_pred -HHhhcccceEEEEeeeCCCCCCcchhcCCCCCc----CCEEEEeCCccCCchhhhhHHHHhcCChhhccCCCCCCHHHH
Confidence 123467899999999999995 56789999983 789999999999998 56666655564 6889999999
Q ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCcc-------eEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCccccc
Q psy240 160 ITQALCLNPPDGERDGPDWPARITHLMKLTPLS-------YSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFD 232 (376)
Q Consensus 160 i~~l~~~~~~~~~~~g~~~~~~L~~~~~~l~G~-------fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~ 232 (376)
+++++.+.+.+.. ..++.+++.++++.+.|. |++++.|+++|+++||+. ||||+..
T Consensus 151 i~~li~~~~~~~~--~~~~~~ai~~~~~~l~~~~~~~~~~~n~~~sdg~~l~a~R~~~---~L~~~~~------------ 213 (251)
T TIGR03442 151 LFALLLNRLLEND--PRALEEALAEVLLILFSAAAAPRVRLNLLLTDGSRLVATRWAD---TLYWLKD------------ 213 (251)
T ss_pred HHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHhhCcccceEEEEEcCCEEEEEEeCC---eEEEEEc------------
Confidence 9999988754311 146778888888887777 999999999999999975 9999985
Q ss_pred ccCCCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcc-eEEEeCCCcEEEEecCCeEE
Q psy240 233 FRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGAR-YVREVYPGEILEVSRTGIKT 297 (376)
Q Consensus 233 ~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~i~~l~pG~~l~i~~~~~~~ 297 (376)
++++++ ||++ +.+ .|++|+||++++++++++++
T Consensus 214 -----~~~~vvASEpl---------------------------~~~~~W~~v~pge~v~i~~~~v~~ 248 (251)
T TIGR03442 214 -----PEGVIVASEPY---------------------------DDDPGWQDVPDRHLLSVSEDDVTI 248 (251)
T ss_pred -----CCEEEEEeCCc---------------------------CCCCCceEeCCCeEEEEECCcEEE
Confidence 467777 9983 123 79999999999999887654
No 35
>cd03766 Gn_AT_II_novel Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthet
Probab=99.97 E-value=1.3e-30 Score=233.94 Aligned_cols=161 Identities=18% Similarity=0.196 Sum_probs=129.8
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+|+++...... .....+..|+.+|+|||||+.|++..+.. .+.+.++|
T Consensus 1 MCGI~~~~~~~~~~~--~~~~~~~~m~~~l~hRGPD~~~~~~~~~~--------------------------~~~~~l~~ 52 (181)
T cd03766 1 MCGILCSVSPSGPHI--NSSLLSEELLPNLRNRGPDYLSTRQLSVT--------------------------NWTLLFTS 52 (181)
T ss_pred CCcEEEEEeCCCCcc--cchhhHHHHHHHHHhcCCCccCCEEeecc--------------------------ccEEEEEe
Confidence 999999998643210 01245788999999999999999875421 13588999
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
.|+++.|.. .+.||+.. .+++++++|||+|||+.+|++ +.||+|+++++|.++ +.. .+
T Consensus 53 ~rL~i~~~~--~~~QP~~~--~~~~~~lv~NGeIyN~~~l~~----------s~sDtEvi~~l~~~~-------g~~-~~ 110 (181)
T cd03766 53 SVLSLRGDH--VTRQPLVD--QSTGNVLQWNGELYNIDGVED----------EENDTEVIFELLANC-------SSE-SQ 110 (181)
T ss_pred eEEEecCCC--CCCCCCEe--CCCCEEEEECCEEECcccccC----------CCCHHHHHHHHHHHH-------hhh-HH
Confidence 999999963 47899985 456799999999999998764 689999999999988 432 36
Q ss_pred HHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecC
Q psy240 181 RITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEG 246 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~ 246 (376)
.+.+++++|+|+|||+++|. ++||++|||+|+|||||+... +++.++| |+.
T Consensus 111 ~i~~~~~~L~G~fA~vi~d~~~~~l~~aRD~~G~rPL~y~~~~---------------~~~~l~~aS~~ 164 (181)
T cd03766 111 DILDVLSSIEGPFAFIYYDASENKLYFGRDCLGRRSLLYKLDP---------------NGFELSISSVS 164 (181)
T ss_pred HHHHHHHhcccceEEEEEeCCCCEEEEEECCCCCcCcEEEeeC---------------CCCcEEEEEcc
Confidence 67778899999999999985 899999999999999999851 1467888 775
No 36
>KOG0571|consensus
Probab=99.97 E-value=1.7e-31 Score=257.37 Aligned_cols=233 Identities=22% Similarity=0.323 Sum_probs=175.3
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
||||+++++... +. ............+.|||||-+|.+..+. ..++|
T Consensus 1 MCGI~Av~~~~~-~~--~~~~~~l~ls~~~~hRgpd~sg~~~~~~------------------------------~~l~h 47 (543)
T KOG0571|consen 1 MCGILAVLGHED-SE--AKKPKALELSRRIRHRGPDWSGLAQRND------------------------------NILGH 47 (543)
T ss_pred CCceeeeecccc-hh--hcChhhhhHHHhhcCCCCCcchhheecc------------------------------ccccc
Confidence 999999999432 21 1123344567899999999999886542 36899
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
-|+|+.+..+ +.||+.. .++.+++.+||||||+.+||..+. .+.+++.+|+|+|+++|++. |
T Consensus 48 eRLAIvdp~s--g~QPi~~--~~~~~~~~vNGEIYNH~~Lr~~~~--~~~~~T~sDcEvIi~lY~kh-------g----- 109 (543)
T KOG0571|consen 48 ERLAIVDPTS--GAQPIVG--EDGTYVVTVNGEIYNHKKLREHCK--DFEFQTGSDCEVIIHLYEKH-------G----- 109 (543)
T ss_pred cceeEecCCc--CCccccc--CCCcEEEEECceeccHHHHHHHhh--hcccccCCCceeeeehHhhc-------C-----
Confidence 9999999853 7999985 677888889999999999999986 57888889999999999998 3
Q ss_pred HHHHHHHhCCcceEEEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhc
Q psy240 181 RITHLMKLTPLSYSLVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKG 257 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~ 257 (376)
..+++..|+|.|||++.|. ++++++||+.|++||||+... ++..+| ||.
T Consensus 110 -~~~~~~~LDG~Fafvl~d~~~~kv~~aRDpiGv~~lY~g~~~----------------~gs~~~aSe~----------- 161 (543)
T KOG0571|consen 110 -GEQAICMLDGVFAFVLLDTKDDKVVAARDPIGVTPLYYGWDS----------------DGSVYFASEM----------- 161 (543)
T ss_pred -chhHHHHhhhheEEEEecCCCCeEEeccCCcCceeeEEEecC----------------CCcEEEeeeh-----------
Confidence 2333445579999999984 679999999999999999973 456667 998
Q ss_pred ccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeEEEEEecCCCCCCCceeeeeeeecccCCcccccchhhhHhhH
Q psy240 258 MGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIKTVSIVRRPDDKPPAFCIFEYVYFARSDSIFEGADSLQYLSV 337 (376)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~~~~~~~~~~~~~e~iy~~~~ds~~~~~~~~~~~~~ 337 (376)
+.+.. . ++.|..+||||+...+-++ ..+|+. |+ |.+..-|...++ -+ .+|
T Consensus 162 k~l~d-----------~-C~~i~~fpPgh~y~~~~~~--~~r~f~-p~----------w~~~~~~s~p~d---~~--~~r 211 (543)
T KOG0571|consen 162 KCLED-----------D-CEKIESFPPGHYYTSKTGK--LTRYFN-PE----------WFDENIPSTPLD---YL--ALR 211 (543)
T ss_pred hhhhh-----------h-hhceeecCCcceeeccccc--ccCCCC-ch----------hhhccCCCCccc---HH--HHH
Confidence 33321 1 6778899999998755443 446664 32 222221221122 11 478
Q ss_pred HHHHHHhhhcccccccCCCcccccccccCCC
Q psy240 338 EGLKQAVQLKMKVDSAEGSFGHCTACLTGEY 368 (376)
Q Consensus 338 ~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~ 368 (376)
..|+.||++||++|+|+|+ .++||-
T Consensus 212 ~~~~~aV~KRLM~d~p~Gv------LLSGGL 236 (543)
T KOG0571|consen 212 HTLEKAVRKRLMTDVPFGV------LLSGGL 236 (543)
T ss_pred HHHHHHHHHHhhccCceeE------EeeCCc
Confidence 9999999999999999999 788874
No 37
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somwhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=99.97 E-value=3.6e-30 Score=243.62 Aligned_cols=236 Identities=22% Similarity=0.190 Sum_probs=167.2
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHH--------hcCCCCcceEEeCCCcceeEEEEeccc-ccccccccccccc
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQ--------HRGQESAGIVTSEGIDSRRFNIMKGMG-MISNIFNDENLKK 91 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~--------hRG~D~~Gi~~~~~~~~g~~~~~K~~g-~~~~~~~~~~l~~ 91 (376)
||+++|+++.+.......+.. ...+..++ .+.+||||++++++. .+.+.++|.++ ..++.+.....+.
T Consensus 1 MCrll~~~~~~~~~~~~~~~~--~~~~~~qs~~~~~~~~~~h~DgwGia~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~ 77 (257)
T cd01908 1 MCRLLGYSGAPIPLEPLLIRP--SHSLLVQSGGPREMKGTVHADGWGIGWYEGK-GGRPFRYRSPLPAWSDINLESLARP 77 (257)
T ss_pred CchhccccCCCcccccceecC--CccchhhcCCccccCCCcCCCCcEEEEecCC-CCeeeeeCCCCCCcCCcchHHhhcc
Confidence 999999998431100001111 11122222 237899999998731 14788999985 4444443333456
Q ss_pred cCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCC-CCcccCCHHHHHHHHHHhCCCC
Q psy240 92 LKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRG-VGLSTRSDSELITQALCLNPPD 170 (376)
Q Consensus 92 ~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g-~~~~~~tDsE~i~~l~~~~~~~ 170 (376)
+.+.++|+|+|+||.|..+..|+|||.. ++|+|+|||.|.|+++|++.|...+ ..+.+.||||++++++.+.+.+
T Consensus 78 ~~~~~~l~H~R~At~G~~~~~n~hPf~~----~~~~~~HNG~i~n~~~l~~~l~~~~~~~~~~~tDSE~~~~li~~~l~~ 153 (257)
T cd01908 78 IKSPLVLAHVRAATVGPVSLENCHPFTR----GRWLFAHNGQLDGFRLLRRRLLRLLPRLPVGTTDSELAFALLLSRLLE 153 (257)
T ss_pred ccccEEEEEEecCCCCCCccccCCCccc----CCEEEEeCCccCCcchhhHHHHhcCccCCccCCHHHHHHHHHHHHHHh
Confidence 7899999999999999777899999985 5899999999999999999998777 6789999999999999887543
Q ss_pred CCCCCCC----HHHHHHHHHHhCC-----cceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCccccc-ccCCCCce
Q psy240 171 GERDGPD----WPARITHLMKLTP-----LSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFD-FRGQESAG 240 (376)
Q Consensus 171 ~~~~g~~----~~~~L~~~~~~l~-----G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~-~~~~~~~~ 240 (376)
. +.. +.+++.+++++++ |+|++++.|+++|+++||+. .+||||+....+-+-.-..+. .....++.
T Consensus 154 ~---~~~~~~~~~~al~~~~~~l~~~~~~~~~n~~~~dg~~l~a~r~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (257)
T cd01908 154 R---DPLDPAELLDAILQTLRELAALAPPGRLNLLLSDGEYLIATRYAS-APSLYYLTRRAPFGCARLLFRSVTTPNDDG 229 (257)
T ss_pred c---CCcchHHHHHHHHHHHHHHHHhCcCeEEEEEEECCCEEEEEEeCC-CCceEEEeccccccccccccccccCCCCCE
Confidence 1 122 6789999999888 79999999999999999987 789999975200000000000 00001367
Q ss_pred EEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecC
Q psy240 241 IVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRT 293 (376)
Q Consensus 241 ~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~ 293 (376)
++| ||++ .. ...|++|+||++++++++
T Consensus 230 ~vvaSE~l-----------~~---------------~~~w~~v~~ge~~~i~~~ 257 (257)
T cd01908 230 VVVASEPL-----------TD---------------DEGWTEVPPGELVVVSEG 257 (257)
T ss_pred EEEEeCCC-----------CC---------------CCCceEeCCCEEEEEeCC
Confidence 777 9993 22 126999999999999753
No 38
>KOG1268|consensus
Probab=99.96 E-value=6.8e-29 Score=244.08 Aligned_cols=194 Identities=28% Similarity=0.419 Sum_probs=163.3
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccc---cccccc---cccCc
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNI---FNDENL---KKLKG 94 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~---~~~~~l---~~~~~ 94 (376)
|||||||.+.-.......+.+.+.++|++|++||+|++|++..... ...+.++|++|.++.+ ++++++ .++.+
T Consensus 1 MCGIF~Y~N~l~~R~R~eIid~Li~GLqRLEYRGYDSaGiaId~~~-~~s~~~~k~~GkVkaL~e~i~~q~~~l~~~f~s 79 (670)
T KOG1268|consen 1 MCGIFGYCNFLIERTRGEIIDTLIDGLQRLEYRGYDSAGIAIDGDE-LESLLIYKQTGKVSSLKEEINNQNLNLDEKFIS 79 (670)
T ss_pred CcceeeeeccccCCcHHHHHHHHHHHHHHhhccCCCCCceeecCCc-ccchhhhcccCceeehhHHHhhcCcccceeeee
Confidence 9999999997433333457788999999999999999999987654 4567789999998754 444332 34578
Q ss_pred cEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCC
Q psy240 95 NLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERD 174 (376)
Q Consensus 95 ~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~ 174 (376)
+++|+|+||||+|..+..|+||+.. +++..++++|||.|.||++|++.|..+|+.|+++||||.+++|+...+++...
T Consensus 80 H~gIAHTRWATHGvPs~~NsHP~rS-d~~n~FvVVHNGIITNyk~lK~~L~~kG~~FESdTDTEciaKL~~~~~D~~~~- 157 (670)
T KOG1268|consen 80 HCGIAHTRWATHGVPSEVNCHPHRS-DPSNEFVVVHNGIITNFKELKALLEKKGYVFESDTDTECIAKLYKHIYDTSPE- 157 (670)
T ss_pred eeeeeeeehhhcCCCCccCCCCCcC-CCCCcEEEEEcCeeccHHHHHHHHHhcCceeecccchHHHHHHHHHHHhhCCC-
Confidence 9999999999999999999999985 67778999999999999999999999999999999999999999877665322
Q ss_pred CCCHHHHHHHHHHhCCcceEEEEEE---CCEEEEEEcCCCCCCcEEEEe
Q psy240 175 GPDWPARITHLMKLTPLSYSLVIME---KDRVFAVRDPYGNRPLCIGKI 220 (376)
Q Consensus 175 g~~~~~~L~~~~~~l~G~fa~v~~d---~~~L~~~RD~~G~rPLyy~~~ 220 (376)
..+|.+..+.++++++|+|+++... ++++++.|+ ..||..+..
T Consensus 158 ~~~F~~lv~~v~k~lEGaFalvfkS~hfP~e~Va~Rr---gSPlliGvK 203 (670)
T KOG1268|consen 158 DLDFHVLVELVLKELEGAFGLLFKSSHFPGEVVAARK---GSPLLIGVK 203 (670)
T ss_pred cccHHHHHHHHHHHhhhHHHHHHHhhcCCcceeeecc---CCcceeeec
Confidence 5678888899999999999999875 699999999 588888875
No 39
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type. Carbapenam synthetase (CarA) is an ATP/Mg2+-dependent enzyme that catalyzes the formation of the beta-lactam ring in (5R)-carbapenem-3-carboxylic acid biosynthesis. CarA is homologous to beta-lactam synthetase (beta-LS), which is involved in the biosynthesis of clavulanic acid, a clinically important beta-lactamase inhibitor. CarA and beta-LS each have two distinct domains, an N-terminal Ntn hydrolase domain and a C-terminal synthetase domain, a domain architecture similar to that of the class-B asparagine synthetases (AS-B's). The N-terminal domain of these enzymes hydrolyzes glutamine to glutamate and ammonia. CarA forms a homotetramer while betaLS forms a heterodimer. The N-terminal folds of CarA and beta-LS are similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (
Probab=99.94 E-value=1.1e-26 Score=210.47 Aligned_cols=147 Identities=16% Similarity=0.107 Sum_probs=119.4
Q ss_pred CCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCcce
Q psy240 114 CQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSY 193 (376)
Q Consensus 114 ~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~L~~~~~~l~G~f 193 (376)
.|+.. .+++++++||||||+.+|+++|...|+.+.+.||+|+++++|++| |.++++.| +|.|
T Consensus 44 ~~~~~----~~~~~iv~NGEIYN~~eLr~~L~~~g~~f~t~sDtEvll~~y~~~-------G~~~l~~L-------~G~F 105 (199)
T cd01909 44 VQVAR----SETGTAYLIGELYNRDELRSLLGAGEGRSAVLGDAELLLLLLTRL-------GLHAFRLA-------EGDF 105 (199)
T ss_pred eeEee----CCCEEEEEEEEEeCHHHHHHHHHhcCCCcCCCCHHHHHHHHHHHH-------hHHHHHHc-------CEEE
Confidence 45554 457999999999999999999988888999999999999999999 87766665 4999
Q ss_pred EEEEEEC-CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccccccccChHHHh
Q psy240 194 SLVIMEK-DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLK 271 (376)
Q Consensus 194 a~v~~d~-~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~ 271 (376)
||+++|. ++|+++|||+|+|||||.. .+.++| ||. ++|.+.+.++..+|++...
T Consensus 106 Afai~D~~~~L~laRDr~GikPLYy~~------------------~~~l~FASEi------kaLla~~~~~~~~d~~~~~ 161 (199)
T cd01909 106 CFFIEDGNGRLTLATDHAGSVPVYLVQ------------------AGEVWATTEL------KLLAAHEGPKAFPFKSAGA 161 (199)
T ss_pred EEEEEcCCCEEEEEECCCCCcCeEEEE------------------CCeEEEEeCH------HHHhhCcCCCcccCcccCC
Confidence 9999997 8999999999999999976 378888 998 6676665555556654322
Q ss_pred hh-hCcceEEEeCCCcEEEEecCC-----eEEEEEec
Q psy240 272 KL-KGARYVREVYPGEILEVSRTG-----IKTVSIVR 302 (376)
Q Consensus 272 ~~-l~~~~i~~l~pG~~l~i~~~~-----~~~~~y~~ 302 (376)
.- --+++|++|||||+++++.++ ....+||+
T Consensus 162 ~~~T~~~gI~rL~PG~~l~~~~~g~~~~~~~~~~yW~ 198 (199)
T cd01909 162 DTVSGLTGVQRVPPGTVNVLTFDGGSYGTAESRRTWT 198 (199)
T ss_pred CCCChhcCceEECCCcEEEEeeCCcccceEEEEEeec
Confidence 10 117999999999999988653 56778995
No 40
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group. This catalytic activity is known as glutamine amidotransferase (GATase) (2.4.2 from EC) []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. On the basis of sequence similarities two classes of GATase domains have been identified [, ], class-I (also known as trpG-type) and class-II (also known as purF-type). Enzymes containing Class-II GATase domains include amido phosphoribosyltransferase (glutamine phosphoribosylpyrophosphate amidotransferase) (2.4.2.14 from EC), which catalyses the first step in purine biosynthesis (gene purF in bacteria, ADE4 in yeast); glucosamine--fructose-6-phosphate aminotransferase (2.6.1.16 from EC), which catalyses the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine (gene glmS in Escherichia coli, nodM in Rhizobium, GFA1 in yeast); and asparagine synthetase (glutamine-hydrolizing) (6.3.5.4 from EC), which is responsible for the synthesis of asparagine from aspartate and glutamine. A cysteine is present at the N-terminal extremity of the mature form of all these enzymes. This domain is found in a number of cysteine peptidases belonging to MEROPS peptidase family C44 and their non-peptidase homologs. ; GO: 0008152 metabolic process; PDB: 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A 1GPH_1 1AO0_D 3OOJ_E 1JXA_C 2J6H_B ....
Probab=99.94 E-value=4.4e-26 Score=223.97 Aligned_cols=143 Identities=32% Similarity=0.410 Sum_probs=111.4
Q ss_pred eEEEEecccccccc---cccccccccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHh
Q psy240 70 RFNIMKGMGMISNI---FNDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLS 146 (376)
Q Consensus 70 ~~~~~K~~g~~~~~---~~~~~l~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~ 146 (376)
++.+||+.+.+.++ +.+...+++.+.++|+|+||+|+|.+++.++|||. +++|||||.|...+++++..
T Consensus 168 ~tivYKg~~~~~~l~~~y~Dl~~~~~~s~~~i~H~RysTnt~p~w~~AqPf~--------~laHNGeInt~~~n~~~l~~ 239 (361)
T PF00310_consen 168 RTIVYKGMGTPEQLAEFYPDLQDEDFKSHFAIGHQRYSTNTFPSWENAQPFR--------ALAHNGEINTIRGNRNWLEA 239 (361)
T ss_dssp SEEEEEECC-GGGHHHHCCGGGCTTEEBSEEEEEEEE-SSSSCSGGGSSSEE--------EEEEEEEETTHHHHHHHHHH
T ss_pred chhhhhhccCHHHHHHHHHhhccccccceEEEEEEecCCCCCCcchhcChHH--------HhhhccccccHHHHHHHHHh
Confidence 34467887777664 56666778899999999999999999999999996 79999999999999999988
Q ss_pred CCCCccc----------------CCHHHHHHHHHHhCCCCCC----------C-----------CCCCHHHHHHHHHHhC
Q psy240 147 RGVGLST----------------RSDSELITQALCLNPPDGE----------R-----------DGPDWPARITHLMKLT 189 (376)
Q Consensus 147 ~g~~~~~----------------~tDsE~i~~l~~~~~~~~~----------~-----------~g~~~~~~L~~~~~~l 189 (376)
++..+.. .||||++.++++..+..+. + ...++.+.+..+++.+
T Consensus 240 r~~~~~~~~~~~~~~~~pi~~~~~SDS~~l~~~le~l~~~g~~l~~a~~~l~p~~~~~~~~~~~~~~~~y~~~~~~~~~~ 319 (361)
T PF00310_consen 240 RGYKLNSPLFGDLKELLPIVNPGGSDSEVLDNLLELLLRRGRSLEEAMMMLIPPAWENDEDMSPEKRAFYEYHASLMEPW 319 (361)
T ss_dssp HCCCBSSTTCGHHHCC-SSS-TTS-HHHHHHHHHHHHHHTTSSHHHHHHHHSGG--TTSCCSTHHHHHHHHHHHHHHCC-
T ss_pred hcccccCccccchhhcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHhhCCcccccCccCCHHHHHHHHHHHHhhccC
Confidence 7777655 8999999998877665531 0 0135778888888899
Q ss_pred CcceEEEEEECCEEEEEEcCCCCCCcEEEEe
Q psy240 190 PLSYSLVIMEKDRVFAVRDPYGNRPLCIGKI 220 (376)
Q Consensus 190 ~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~ 220 (376)
+|+|+++..+++.++++|||+|+||+.|+.+
T Consensus 320 dGPaai~~~~g~~~~a~~Dr~GLRP~~~~~~ 350 (361)
T PF00310_consen 320 DGPAAIIFTDGNGVGAFLDRNGLRPLRYGIT 350 (361)
T ss_dssp -CCEEEEEECSSEEEEEE-TT--S--EEEEE
T ss_pred CCceEEEEEeCCEEEEEECCCCCcceEEEEE
Confidence 9999999999999999999999999999997
No 41
>PF13522 GATase_6: Glutamine amidotransferase domain
Probab=99.94 E-value=6.4e-26 Score=193.79 Aligned_cols=121 Identities=34% Similarity=0.581 Sum_probs=106.8
Q ss_pred cCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCC
Q psy240 92 LKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDG 171 (376)
Q Consensus 92 ~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~ 171 (376)
+.+.++|||+||||+|.....++|||. +..++++++|||+|+|+.+|+++|...|+.+.+.||||+|++++.++
T Consensus 10 ~~~~~~lgH~R~AT~G~~~~~~~hPf~--~~~g~~~~~HNG~i~n~~~L~~~l~~~g~~~~~~tDSEii~~li~~~---- 83 (133)
T PF13522_consen 10 LDGEAALGHTRYATVGSPTEENNHPFS--NRDGRIALAHNGNIDNYKELREELGEKGHPFESDTDSEIIAALIHRW---- 83 (133)
T ss_pred cCCCEEEEEeecCCCCCCCCcCCCCCc--CCCCCEEEEECCeecCHHHHHHHHHHCCCcccCCCHHHHHHHHHHHH----
Confidence 457899999999999998556679993 46788999999999999999999988899999999999999999777
Q ss_pred CCCCCCHHHHHHHHHHhCCcceEEEEEE--CCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ec
Q psy240 172 ERDGPDWPARITHLMKLTPLSYSLVIME--KDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SE 245 (376)
Q Consensus 172 ~~~g~~~~~~L~~~~~~l~G~fa~v~~d--~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE 245 (376)
| .+++++++|.|++++++ .++++++||+.|.+||||+.. ++.++| ||
T Consensus 84 ---g-------~~~l~~l~G~~a~~~~~~~~~~l~~~rd~~g~~PL~~~~~-----------------~~~~~~ASE 133 (133)
T PF13522_consen 84 ---G-------EEALERLDGAFAFAVYDKTPNKLFLARDPLGIRPLYYGRD-----------------GDGYVFASE 133 (133)
T ss_pred ---H-------HHHHHHhcCceEEEEEEcCCCEEEEEEcCCCCCCEEEEEc-----------------CCEEEEEeC
Confidence 6 44556778999999997 589999999999999999996 688888 98
No 42
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-terminal glutaminase domain catalyzes the hydrolysis of glutamine to glutamic acid and ammonia, and has a fold similar to that of other glutamine amidotransferases such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), and beta lactam synthetase (beta-LS), as well as the Ntn hydrolase folds of the proteasomal alpha and beta subunits.
Probab=99.93 E-value=2.2e-24 Score=213.44 Aligned_cols=206 Identities=21% Similarity=0.187 Sum_probs=156.7
Q ss_pred hHHHHHHHHHHHHhcCCC-CcceEEeCCCcceeEEEEeccccc---ccccccccccccCccEEEEEeccccCCCCCCCCC
Q psy240 39 VAHTICMGLIALQHRGQE-SAGIVTSEGIDSRRFNIMKGMGMI---SNIFNDENLKKLKGNLGIGHTRYSTSAASEEVNC 114 (376)
Q Consensus 39 ~~~~l~~~l~~l~hRG~D-~~Gi~~~~~~~~g~~~~~K~~g~~---~~~~~~~~l~~~~~~~~igH~R~at~g~~~~~n~ 114 (376)
....|+..-+.++++-.. ..++++.+-. .++.+||+.+++ .+++.+...+.+.+.++|+|+|+||++.+++.++
T Consensus 144 ~er~l~~~r~~~e~~~~~~~~~~yv~Sls--~~~iVyKGm~~~~~v~~~Y~DL~~~~~~s~~al~H~RfSTNT~p~W~~A 221 (413)
T cd00713 144 FERKLYLLRKRIEKAIRAADEDFYVCSLS--SRTIVYKGMLLPEQLGQFYPDLQDPRFESAFALVHSRFSTNTFPSWPLA 221 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEecc--cceEEEeccccHHHHHHhccccCcccceEEEEEEEEecCCCCCCCcccC
Confidence 345565655666654321 2345555432 378899999995 4567777788899999999999999999999999
Q ss_pred CCceeecCCCcEEEEEEeeecChHHHHHHHHhCC-----------------CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Q psy240 115 QPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRG-----------------VGLSTRSDSELITQALCLNPPDGERDGPD 177 (376)
Q Consensus 115 qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g-----------------~~~~~~tDsE~i~~l~~~~~~~~~~~g~~ 177 (376)
|||. +++|||||+|+..+++++..+. +...+.||||++.++++..... |.+
T Consensus 222 qPfr--------~laHNGEInT~~gnr~~m~are~~~~s~~~g~~~~~~~pi~~~~~SDS~~ld~~le~l~~~----g~~ 289 (413)
T cd00713 222 QPFR--------YLAHNGEINTIRGNRNWMRAREGLLKSPLFGEDLKKLKPIINPGGSDSASLDNVLELLVRS----GRS 289 (413)
T ss_pred Ccce--------eEEEcccccCHHHHHHHHHHhhhhhcCccchhhHHhcCCcCCCCCChHHHHHHHHHHHHHc----CCC
Confidence 9997 5899999999999999986532 1123689999999999766554 445
Q ss_pred HHHHHH-------------------------HHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCccccc
Q psy240 178 WPARIT-------------------------HLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFD 232 (376)
Q Consensus 178 ~~~~L~-------------------------~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~ 232 (376)
+.+++. .+++.++|+|++++.|++.++++|||+|.|||+|+...
T Consensus 290 l~~A~~mliPeaw~~~~~m~~~~r~fYey~~~~me~~dGp~aiv~~dg~~i~a~rDrnGlRPl~~~~t~----------- 358 (413)
T cd00713 290 LPEAMMMLIPEAWQNNPTMDPELRAFYEYHSSLMEPWDGPAAIAFTDGRQVGASLDRNGLRPARYVITK----------- 358 (413)
T ss_pred HHHHHHHhCChhhccCccCCHHHHHHHHHHHHHhccCCCcEEEEEEeCCEEEEEeCCCCCcceEEEEEC-----------
Confidence 555555 77788999999999999999999999999999999862
Q ss_pred ccCCCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEE---EeCCCcEEEEecCCeEE
Q psy240 233 FRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVR---EVYPGEILEVSRTGIKT 297 (376)
Q Consensus 233 ~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~---~l~pG~~l~i~~~~~~~ 297 (376)
++.+++ ||. +++ . ++.+.|. .|.||+++.|+.+..++
T Consensus 359 -----d~~~v~ASE~-----------gal-~-----------~~~~~V~~kg~l~PGe~v~id~~~g~i 399 (413)
T cd00713 359 -----DGLLIMSSEV-----------GVV-D-----------VPPEKVVEKGRLGPGEMLLVDLEEGRI 399 (413)
T ss_pred -----CCEEEEEeCC-----------ccc-C-----------CCcceeeecCCCCCCeEEEEECCCCEE
Confidence 345677 998 444 2 2234555 89999999998765443
No 43
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D.
Probab=99.91 E-value=3.9e-24 Score=203.47 Aligned_cols=231 Identities=22% Similarity=0.198 Sum_probs=99.0
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHH------hcCCCCcceEEeCCCcceeEEEEeccccccc--cccccccccc
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQ------HRGQESAGIVTSEGIDSRRFNIMKGMGMISN--IFNDENLKKL 92 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~------hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~--~~~~~~l~~~ 92 (376)
||.++|+.+.... ++ ...|..+. .+.+||||++++++. ...++|++..+.+ ......-..+
T Consensus 1 MC~Llg~s~~~p~----~~----~~sl~~~~~~~~~~~~h~DGwGiawy~~~---~~~~~k~~~pa~~~~~~~~l~~~~i 69 (271)
T PF13230_consen 1 MCRLLGMSSNRPT----DI----NFSLTSFAARGGKTPPHPDGWGIAWYDGG---GPRVFKSPRPAWNSPNLRLLADYKI 69 (271)
T ss_dssp -------------------------------------------EEEEEESSS---S-EEEEESS-CCC-HHHHHHHH-H-
T ss_pred Ccccccccccccc----cc----ccccccccccccCcCCCCCeeEEEEEeCC---eEEEEECCCCCcCCchHHHHhhCCc
Confidence 9999999886432 12 12233332 345899999999853 6777777644322 1111111136
Q ss_pred CccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCC
Q psy240 93 KGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGE 172 (376)
Q Consensus 93 ~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~ 172 (376)
.+.++|+|+|.||.|..+..|||||.+...+++|+|+|||.|.+++.++... +...|+||||.+++++...+.+..
T Consensus 70 ~S~~~laHvR~AT~G~v~~~N~HPF~~~~~g~~w~FaHNG~i~~f~~~~~~~----~~~~G~TDSE~~F~lll~~l~~~~ 145 (271)
T PF13230_consen 70 RSRLFLAHVRAATQGAVSLENCHPFSRELWGRRWLFAHNGTIPGFEDILDDR----YQPVGTTDSEHAFCLLLDQLRDRG 145 (271)
T ss_dssp EEEEEEEEE------------SS-EE----ETTEEEEEEEEETTGGGGHHHH----HT--S--HHHHHHHHHHHTTTTT-
T ss_pred cCCEEEEEecccCCCCCCcccCCCceeccCCCcEEEEeCCccccccccCccc----cccCCCcHHHHHHHHHHHHHHHhC
Confidence 7899999999999998889999999975445789999999999988766332 336799999999999998876522
Q ss_pred CCC----CCHHHHHHHHHHhC--CcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCc---c--ccccc---CCCC
Q psy240 173 RDG----PDWPARITHLMKLT--PLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQS---T--VFDFR---GQES 238 (376)
Q Consensus 173 ~~g----~~~~~~L~~~~~~l--~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~---~--~~~~~---~~~~ 238 (376)
... ...++.|.++++++ .|.++|++.|++.||+.|+ ++|||.....+.+-.. . ..++. ...+
T Consensus 146 ~~~~~~~~~~~~~l~~~~~~~~~~~~~N~~lsDG~~l~a~~~----~~l~~~~r~~p~~~~~l~~~~~~~~~~~~~~~~~ 221 (271)
T PF13230_consen 146 PDAPPALEELFEALRELAKEINEYGSLNFLLSDGERLFAHRY----TSLYYLTRRPPFGKARLFDEDYEVDFSEVTDPDD 221 (271)
T ss_dssp HH--HHHHHHHHHHHHHHHS-SSSEEEEEEEE-SS-EEEEEE----ESSS----------------------EEEEETTT
T ss_pred CcccccHHHHHHHHHHHHHHhccCeeEEEEEECCceEEEEEc----CCeeEEeccccccccccccchhhhhhhhccCCCC
Confidence 100 12234455555554 3789999999999999998 4466663211110000 0 01110 1124
Q ss_pred ceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEEEeCCCcEEEEecCCeE
Q psy240 239 AGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVREVYPGEILEVSRTGIK 296 (376)
Q Consensus 239 ~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~l~pG~~l~i~~~~~~ 296 (376)
..+++ ||+|. . .+.|..||+|+++++..+.+.
T Consensus 222 ~~~vVaSePLt-------------~-------------~e~W~~vp~g~~l~~~~G~v~ 254 (271)
T PF13230_consen 222 RAVVVASEPLT-------------D-------------DEDWEPVPPGSLLVFRDGEVV 254 (271)
T ss_dssp TEEEEESS------------------------------SS--EE--SSEEEE-------
T ss_pred CEEEEEeccCC-------------C-------------CCCeEEcCCCcEEEEeccccc
Confidence 55666 88841 1 356999999999999876543
No 44
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A.
Probab=99.90 E-value=5e-24 Score=180.14 Aligned_cols=117 Identities=38% Similarity=0.536 Sum_probs=64.8
Q ss_pred EeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHH
Q psy240 100 HTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWP 179 (376)
Q Consensus 100 H~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~ 179 (376)
|+||+|.+. ..+.||+.. +.+++++++|||+|||+++|+++|...|+.+.+.+|+|+++++|+++ .
T Consensus 1 h~rl~~~~~--~~~~QP~~~-~~~~~~~l~~nG~i~N~~eL~~~l~~~g~~~~~~~D~e~i~~~~~~~-----------~ 66 (125)
T PF13537_consen 1 HVRLSTDDS--DEGAQPFVS-SEDGELVLVFNGEIYNREELRRELEERGHQFSSDSDSELILHLYEEY-----------R 66 (125)
T ss_dssp ---------------------------EEEEEEEES-HHHHHHTSSSS---S--SSHHHHHHHHHHH-------------
T ss_pred Ccccccccc--ccccccccc-ccccCEEEEEEEEEEChHHHHHHhhhcccccCCCCCHHHHHHHHHHH-----------H
Confidence 899999554 358999995 46788999999999999999999988788889999999999999872 1
Q ss_pred HHHHHHHHhCCcceEEEEEECC--EEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecC
Q psy240 180 ARITHLMKLTPLSYSLVIMEKD--RVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEG 246 (376)
Q Consensus 180 ~~L~~~~~~l~G~fa~v~~d~~--~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~ 246 (376)
+...++++.++|.||++++|++ +++++||++|.|||||+... ++.++| ||.
T Consensus 67 ~~~~~~~~~l~G~fa~v~~d~~~~~l~~~rD~~G~rpLyy~~~~----------------g~~~~faSe~ 120 (125)
T PF13537_consen 67 EWGEDFLKRLDGPFAFVIWDKDKKRLFLARDRFGIRPLYYGRTD----------------GNGLAFASEI 120 (125)
T ss_dssp -HGGGGGGT--EEEEEEEEETTE--EEEEE-TT--S--EEEEET----------------T-EEEEESSH
T ss_pred HHHHHHHHhCCceEEEEEEeCCCcEEEEEECCCCCCCeEEEEeC----------------CCEEEEEEcH
Confidence 2233445555699999999964 59999999999999999971 368888 886
No 45
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum. Wali7 has a single domain similar to the glutamine amidotransferase domain of glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The Wali7 domain is also somewhat similar to the Ntn hydrolase fold of the proteasomal alph and beta subunits.
Probab=99.81 E-value=6.2e-19 Score=161.00 Aligned_cols=135 Identities=20% Similarity=0.284 Sum_probs=98.8
Q ss_pred CCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCcceE
Q psy240 115 QPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYS 194 (376)
Q Consensus 115 qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~L~~~~~~l~G~fa 194 (376)
+|-.. +..+++++++||+|||+.+|+++| +. .++.+|+|+|+++|++|-+. |.-. ..+++++|+|.||
T Consensus 63 ~~rl~-~~~~~~~~vfnGeIyN~~eLr~~l---g~-~~t~sD~evIl~lY~~~~d~----G~y~---~~~~l~~L~G~FA 130 (224)
T cd01910 63 HPRLF-AVKDDIFCLFQGHLDNLGSLKQQY---GL-SKTANEAMLVIEAYRTLRDR----GPYP---ADQVVKDLEGSFA 130 (224)
T ss_pred cCcEE-CCCCCEEEEEEeEEcCHHHHHHHh---CC-CCCCcHHHHHHHHHHHHHhc----CCcc---HHHHHHhcCeEEE
Confidence 45443 456778999999999999999998 32 36779999999999986221 4211 1234566679999
Q ss_pred EEEEEC--CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccccccccChHHHh
Q psy240 195 LVIMEK--DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLK 271 (376)
Q Consensus 195 ~v~~d~--~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~ 271 (376)
|+++|. ++++++||++|++||||+... ++.++| ||. ++|...
T Consensus 131 Fvi~D~~~~~l~lARD~~Gi~PLYyg~~~----------------dG~l~FASEl------kaL~~~------------- 175 (224)
T cd01910 131 FVLYDKKTSTVFVASDADGSVPLYWGIAA----------------DGSVVFSDDV------ELVKAS------------- 175 (224)
T ss_pred EEEEECCCCEEEEEEcCCCCcceEEEEeC----------------CCEEEEEeCH------HHhhhh-------------
Confidence 999994 899999999999999999852 678889 887 333310
Q ss_pred hhhCcceEEEeCCCcEEEEecCCeEEEEEec
Q psy240 272 KLKGARYVREVYPGEILEVSRTGIKTVSIVR 302 (376)
Q Consensus 272 ~~l~~~~i~~l~pG~~l~i~~~~~~~~~y~~ 302 (376)
. .+.+..+||||+.. +.++. .+|+.
T Consensus 176 --c-~~~~~~FPpG~~~~-s~ggl--~~~~~ 200 (224)
T cd01910 176 --C-GKSFAPFPKGCFFH-SEGGL--RSFEH 200 (224)
T ss_pred --h-ccEEEEECCCCEEe-CCCCE--EEeeC
Confidence 1 15678999999876 43343 45654
No 46
>PRK11750 gltB glutamate synthase subunit alpha; Provisional
Probab=99.75 E-value=1.2e-17 Score=183.99 Aligned_cols=230 Identities=20% Similarity=0.115 Sum_probs=160.2
Q ss_pred ccceEEEEEEeCCC-CCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccc---cccccccccCc
Q psy240 19 THECGVFACVSTGT-WPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNI---FNDENLKKLKG 94 (376)
Q Consensus 19 ~~MCGI~G~~~~~~-~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~---~~~~~l~~~~~ 94 (376)
..|.-|.=++-... .....+....++..-+.++++-.+..++++.+-. .+..+||+.+.+.++ +.+..-+.+.+
T Consensus 135 ~~~P~i~Q~fv~~~~~~~~~~fer~Ly~~R~~~e~~~~~~~~~Yi~SlS--~rtiVYKGml~~~ql~~fY~DL~d~~~~s 212 (1485)
T PRK11750 135 SSLPRIEQVFVNAPAGWRERDFERRLFIARRRIEKRLADDKDFYVCSLS--NLVIIYKGLMMPADLPRFYLDLADLRLES 212 (1485)
T ss_pred hCCCeEEEEEEccCCCCChhhHHHHHHHHHHHHHHhhccCCCEEEEecC--CCcceeEecccHHHHHHhhhhhCCcceeE
Confidence 35777766654321 0011123345555556666654334456665432 377889999887765 34444567889
Q ss_pred cEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCC----------------cccCCHHH
Q psy240 95 NLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVG----------------LSTRSDSE 158 (376)
Q Consensus 95 ~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~----------------~~~~tDsE 158 (376)
.+++.|.|+||+..+++..+|||. .++|||||+...-.++++..++.. -.+.|||+
T Consensus 213 ~~al~HsRFSTNT~PsW~~AqPFR--------~laHNGEINTi~gN~nwm~are~~l~s~~~~~~~~~~Pii~~~~SDSa 284 (1485)
T PRK11750 213 AICVFHQRFSTNTLPRWPLAQPFR--------YLAHNGEINTITGNRQWARARAYKFQTPLIPDLQEAAPFVNETGSDSS 284 (1485)
T ss_pred EEEEEECcCCCCCCCCCCcCCCce--------eeeeccccccHHHHHHHHHHHHHhccCCCcchHHhhCCcCCCCCChHH
Confidence 999999999999999999999997 579999999998888887655322 14578999
Q ss_pred HHHHHHHhCCCCCC----------C--C--C-------CCHHHHHHHHHHhCCcceEEEEEECCEEEEEEcCCCCCCcEE
Q psy240 159 LITQALCLNPPDGE----------R--D--G-------PDWPARITHLMKLTPLSYSLVIMEKDRVFAVRDPYGNRPLCI 217 (376)
Q Consensus 159 ~i~~l~~~~~~~~~----------~--~--g-------~~~~~~L~~~~~~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy 217 (376)
.+-..++-....+. + + . .+|.+.-..+++-|+|+|++++.|++.++++|||+|.|||.|
T Consensus 285 ~lDn~lElL~~~G~sl~~A~~mliPeaW~~~~~m~~~~r~fYeY~s~lmEpwdGpaaiv~~~g~~i~A~~DrnGlRPlr~ 364 (1485)
T PRK11750 285 SLDNMLELLLAGGMDLFRAMRLLVPPAWQNNPDMDPDLRAFYEFNSMHMEPWDGPAGIVMTDGRYAACNLDRNGLRPARY 364 (1485)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCCcccccCCCCCHHHHHHHHHHHhhcccCCCCEEEEEEeCCEEEEecCCCCCccceE
Confidence 98777765544421 0 0 1 134444444555689999999999999999999999999988
Q ss_pred EEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccccccccChHHHhhhhCcceEE--EeCCCcEEEEecCC
Q psy240 218 GKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFNDENLKKLKGARYVR--EVYPGEILEVSRTG 294 (376)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~--~l~pG~~l~i~~~~ 294 (376)
+... ++.+++ ||. +.+.. .+.+.++ +|.||+++.++...
T Consensus 365 ~~~~----------------d~~~i~aSE~-----------g~ldi-----------~~~~vvrkg~l~PGemi~id~~~ 406 (1485)
T PRK11750 365 VITK----------------DKLITLASEV-----------GIWDY-----------QPDEVVEKGRVGPGELLVIDTRT 406 (1485)
T ss_pred EEEc----------------CCEEEEEecc-----------eeeec-----------ccceeEEecccCCCeEEEEeCCC
Confidence 8862 455778 998 55422 2345566 89999999998754
Q ss_pred eE
Q psy240 295 IK 296 (376)
Q Consensus 295 ~~ 296 (376)
-+
T Consensus 407 g~ 408 (1485)
T PRK11750 407 GR 408 (1485)
T ss_pred Ce
Confidence 33
No 47
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
Probab=99.75 E-value=1.9e-17 Score=161.22 Aligned_cols=140 Identities=24% Similarity=0.310 Sum_probs=105.3
Q ss_pred EEecccccccccc---cccccccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCC
Q psy240 73 IMKGMGMISNIFN---DENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGV 149 (376)
Q Consensus 73 ~~K~~g~~~~~~~---~~~l~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~ 149 (376)
++|+.+++.++-. +...++++|.++|+|+|++|+...++..+|||. .++|||||+++.-.++++..+++
T Consensus 178 VYKG~~~p~~V~~~y~dl~~~~~~s~~~l~HsRFSTNT~p~W~~AHPfr--------~lvHNGEInT~~gN~nwm~ar~~ 249 (371)
T COG0067 178 VYKGVGLPEDVAEFYLDLDDERYKSAIALVHTRFSTNTFPSWPLAHPFR--------LLVHNGEINTYGGNRNWLEARGY 249 (371)
T ss_pred EEecccCHHHHHHHHhhccchhhceeEEEEEeccCCCCCCCCCccCcce--------eeeecceecccccHHHHHHHhhc
Confidence 3455555544433 444566789999999999999998888999997 46999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCCCCC-------------CCCCCC-------------------------HHHHHHHHHHhCCc
Q psy240 150 GLSTRSDSELITQALCLNPPDG-------------ERDGPD-------------------------WPARITHLMKLTPL 191 (376)
Q Consensus 150 ~~~~~tDsE~i~~l~~~~~~~~-------------~~~g~~-------------------------~~~~L~~~~~~l~G 191 (376)
.+++.+|+|.+..++-...+.+ ...|.+ +.+.=..+.+-++|
T Consensus 250 ~~~s~~~~e~~a~l~p~~~~~~sDs~~~dn~lE~l~~~G~~l~~a~~m~~P~aw~~~~~~~~~~~afye~~~~l~epwdG 329 (371)
T COG0067 250 KFESPTDGEVLAKLLPILMRGGSDSASLDNALELLLLGGRDLYHAAMLLGPEAWVVGTDMDPEGRAFYEDHSALMEPWDG 329 (371)
T ss_pred ccccCccHHHHHHHHHHhcccCCcchhhhHHHHHHHhcCcCchhHHHhcCchhhccCCCCCcceEEEEehhhhCCCCccC
Confidence 9999999999888875333321 001111 11111122334688
Q ss_pred ceEEEEEECCEEEEEEcCCCCCCcEEEEe
Q psy240 192 SYSLVIMEKDRVFAVRDPYGNRPLCIGKI 220 (376)
Q Consensus 192 ~fa~v~~d~~~L~~~RD~~G~rPLyy~~~ 220 (376)
+-++++.|+.+.-+.+|+.|.||.=|...
T Consensus 330 pa~~~f~dgse~gA~ldrngLrp~Ry~~t 358 (371)
T COG0067 330 PADIVFTDGSEEGAILDRNGLRPARYWIT 358 (371)
T ss_pred CcceeEEeeeeeeeeeccCCCCcceEEEe
Confidence 88999999999999999999999977775
No 48
>COG0121 Predicted glutamine amidotransferase [General function prediction only]
Probab=99.69 E-value=4.7e-16 Score=145.63 Aligned_cols=130 Identities=21% Similarity=0.158 Sum_probs=90.8
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHH---hcCCCCcceEEeCCCcceeEEEEeccccccccccccc----ccccC
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQ---HRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDEN----LKKLK 93 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~---hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~----l~~~~ 93 (376)
||+++|+.+.... ++ -.......... -..+||||++.+.+. .+..+|++-. .|.+.+ ...++
T Consensus 1 MCrlLg~~g~~p~----~~-~~s~~~~~~~~~~~~~h~DGwGia~y~~~---~~~~yk~~~P---~~~d~~~~~~~~~i~ 69 (252)
T COG0121 1 MCRLLGMHGNPPT----DS-LFSQSGDPRRAGGTGQHGDGWGIAFYEGR---GPRLYKSPLP---AWEDIALLVLAYPIK 69 (252)
T ss_pred CceeeeecCCCcc----hh-hhhhccchhhccCCCCCCCcceEEEEcCC---ccEEEeCCCc---cccchhhhhcccccC
Confidence 9999999986521 11 11111222222 244799999999874 6677777533 233332 24567
Q ss_pred ccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHH
Q psy240 94 GNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALC 165 (376)
Q Consensus 94 ~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~ 165 (376)
+.++|+|+|.||.|..+..|+|||..+.....|.|+|||.|.+++.+. ...+...+.+|+|..+....
T Consensus 70 S~~viaHvR~At~G~vs~~ntHPF~~~~~~~~~~FaHNG~l~~~~~~~----~~~~~~~~~tds~~~~~~~~ 137 (252)
T COG0121 70 SELVIAHVRKATQGEVSLSNTHPFTRELWGYIWLFAHNGQLDKFKLLE----GRKLEPVGYTDSEAAFCGIT 137 (252)
T ss_pred ccEEEEEEeccCCCcccccCCCCccccCCccceEEEecCcccCccccc----ccccCCCCcchHHHHHHHhh
Confidence 889999999999998889999999986666678999999999997622 22345567889998887553
No 49
>KOG0573|consensus
Probab=99.46 E-value=9.1e-13 Score=129.08 Aligned_cols=145 Identities=21% Similarity=0.255 Sum_probs=98.1
Q ss_pred ceEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCCCCcceEEeCCCcceeEEEEecccccccccccccccccCccEEEEE
Q psy240 21 ECGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQESAGIVTSEGIDSRRFNIMKGMGMISNIFNDENLKKLKGNLGIGH 100 (376)
Q Consensus 21 MCGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~D~~Gi~~~~~~~~g~~~~~K~~g~~~~~~~~~~l~~~~~~~~igH 100 (376)
|||||.-+.++....+ ..+-..|...+..||||..+-...+.. ++. -++.+|
T Consensus 1 MCGI~~s~~~~~~l~~---~~i~~~l~~~~~~rg~d~~~~v~~~~~--~y~-----------------------~~f~~~ 52 (520)
T KOG0573|consen 1 MCGIFLSVDKDLALNS---ELISEALGLLIGNRGPDHSSKVCTDGK--PYI-----------------------VLFESS 52 (520)
T ss_pred CceEEEeecCCccccc---cchhhHHHHHhhccCCCchhhhhhccc--cee-----------------------EEeecc
Confidence 9999998887643221 123345678889999997654433321 111 011112
Q ss_pred eccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy240 101 TRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPA 180 (376)
Q Consensus 101 ~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~ 180 (376)
+ ++..|. ...||+.. +++++|.+||+|||.+ +.++..|+.+++..+... ++. .
T Consensus 53 v-L~lrG~---~t~Qpvv~---d~~~vfl~NGeIyn~~-----------~s~~~~d~~~l~~~l~~~-------~e~--~ 105 (520)
T KOG0573|consen 53 V-LSLRGY---LTKQPVVE---DDRYVFLFNGEIYNGE-----------KSDTLFDTDILAEELSNL-------KES--G 105 (520)
T ss_pred e-EEEeee---eccCceec---ccceEEEecceeccCC-----------CccccchHHHHHHHHhcC-------Ccc--c
Confidence 1 122231 13699874 5568999999999953 345667999999988766 322 2
Q ss_pred HHHHHHHhCCcceEEEEEE--CCEEEEEEcCCCCCCcEEEEe
Q psy240 181 RITHLMKLTPLSYSLVIME--KDRVFAVRDPYGNRPLCIGKI 220 (376)
Q Consensus 181 ~L~~~~~~l~G~fa~v~~d--~~~L~~~RD~~G~rPLyy~~~ 220 (376)
.+.+.++.+.|+|++++++ .++||..||++|+|+|.|...
T Consensus 106 ~Il~~i~~~qGp~~~iyY~~~~~~LyfgRD~~GRrSLly~~~ 147 (520)
T KOG0573|consen 106 DILDIIKSLQGPWAFIYYDVRSDKLYFGRDDIGRRSLLYSLD 147 (520)
T ss_pred cHHHHHHhccCCceEEEEEccCcEEEEecccccceeeeEEec
Confidence 3344557789999999998 589999999999999999986
No 50
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length. There are two conserved sequence motifs: YGL and LRDR.
Probab=98.94 E-value=1.4e-08 Score=91.78 Aligned_cols=125 Identities=22% Similarity=0.339 Sum_probs=93.9
Q ss_pred CCcEEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCcceEEEEEE--C
Q psy240 123 HGVLAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIME--K 200 (376)
Q Consensus 123 ~~~~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d--~ 200 (376)
-+++..+|-|.|.|...|++++ |. -++.++.-+++.+|...-++ |+-..++ +++.|+|.||||++| .
T Consensus 74 ~DdIfCiF~G~L~Nl~~L~qqY---GL-sK~~nEa~~vIEAYrtLRDR----gPyPadq---vv~~L~G~FaFVlyD~~~ 142 (228)
T PF12481_consen 74 VDDIFCIFLGSLENLCSLRQQY---GL-SKGANEAMFVIEAYRTLRDR----GPYPADQ---VVKDLEGSFAFVLYDSKT 142 (228)
T ss_pred cCCEEEEEecchhhHHHHHHHh---Cc-CcCcchhhhHHHHHHHhhcc----CCCChHH---HHHhccCceEEEEEecCC
Confidence 4568889999999999999997 33 36778888999999776433 6655544 588899999999999 4
Q ss_pred CEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEEecCCccchhhhhh-cccccccccChHHHhhhhCcceE
Q psy240 201 DRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVTSEGIDSRRFNIMK-GMGMISNIFNDENLKKLKGARYV 279 (376)
Q Consensus 201 ~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~SE~l~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~i 279 (376)
+.+++|||+.|.-|||||... ++.++||+-+ ..++ .|+ +..
T Consensus 143 ~tvf~A~d~~G~vpLyWGi~~----------------DGslv~Sdd~-----~~ik~~C~-----------------kS~ 184 (228)
T PF12481_consen 143 GTVFVARDSDGSVPLYWGIAA----------------DGSLVFSDDL-----ELIKEGCG-----------------KSF 184 (228)
T ss_pred CcEEEeecCCCCcceEEEEeC----------------CCCEEEcCCH-----HHHHhhhh-----------------hcc
Confidence 899999999999999999973 6778886552 3332 222 122
Q ss_pred EEeCCCcEEEEecCCeEE
Q psy240 280 REVYPGEILEVSRTGIKT 297 (376)
Q Consensus 280 ~~l~pG~~l~i~~~~~~~ 297 (376)
-.+|+|.+.. +.+|.+.
T Consensus 185 ApFP~Gc~f~-S~~Gl~s 201 (228)
T PF12481_consen 185 APFPAGCFFS-SEGGLRS 201 (228)
T ss_pred CCCCcceEEE-ecCceEe
Confidence 3689997766 5567644
No 51
>KOG0399|consensus
Probab=98.56 E-value=6e-07 Score=96.73 Aligned_cols=180 Identities=21% Similarity=0.220 Sum_probs=121.9
Q ss_pred eEEEEeccccccccc---ccccccccCccEEEEEeccccCCCCCCCCCCCceeecCCCcEEEEEEeeecChHHHHHHHHh
Q psy240 70 RFNIMKGMGMISNIF---NDENLKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTAHGVLAVAHNGEIVNAERLRRMVLS 146 (376)
Q Consensus 70 ~~~~~K~~g~~~~~~---~~~~l~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~~~~~~v~NGeI~N~~~L~~~L~~ 146 (376)
+..+||+.=.+..++ .+..-+.+.++.+|-|.|++|+..+++..+||+. .+.|||||+...--.+++..
T Consensus 257 ~TIVYKGql~~~ql~~yY~DL~N~~y~S~~AlvHsRFSTNTfPsWdrAQPmR--------~l~HNGEINTlrGN~NwMra 328 (2142)
T KOG0399|consen 257 QTIVYKGQLRPEQLYNYYPDLTNAEYKSHFALVHSRFSTNTFPSWDRAQPMR--------FLAHNGEINTLRGNKNWMRA 328 (2142)
T ss_pred ceEEEecccCHHHHhhhcccccchhhcccceeeeeccccCCCCCccccccch--------hhhccCceeeeccchhHHHH
Confidence 667888865554443 3444456789999999999999988888999997 58999999854333333211
Q ss_pred ------CC---------CCc--ccCCHHHHHHHHHHhCCCCC-C---------------------CCCCCHHHHHHHHHH
Q psy240 147 ------RG---------VGL--STRSDSELITQALCLNPPDG-E---------------------RDGPDWPARITHLMK 187 (376)
Q Consensus 147 ------~g---------~~~--~~~tDsE~i~~l~~~~~~~~-~---------------------~~g~~~~~~L~~~~~ 187 (376)
.. +++ .+.|||-.+-..++-..+.+ . ++..+|.+.....++
T Consensus 329 REg~mks~~~~~e~~kl~Pive~~~SDSa~lDnv~ElLvrsG~rslpEAvM~mVPEA~~nd~~~~~e~k~fYd~~a~~ME 408 (2142)
T KOG0399|consen 329 REGVMKSAVFKDELNKLLPIVEEGGSDSAALDNVLELLVRSGGRSLPEAVMMMVPEAWQNDKNMDPEKKAFYDWAACQME 408 (2142)
T ss_pred HHHhhhcchhhhhhhhhcccccCCCCchhhhhHHHHHHHHhCCCCcHHHHHHhChHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 11 112 46788876555544433332 0 123457778888888
Q ss_pred hCCcceEEEEEECCEEEEEEcCCCCCCcEEEEecCCCCCCcccccccCCCCceEEE-ecCCccchhhhhhcccccccccC
Q psy240 188 LTPLSYSLVIMEKDRVFAVRDPYGNRPLCIGKILPMKGSQSTVFDFRGQESAGIVT-SEGIDSRRFNIMKGMGMISNIFN 266 (376)
Q Consensus 188 ~l~G~fa~v~~d~~~L~~~RD~~G~rPLyy~~~~~~~~~~~~~~~~~~~~~~~~~~-SE~l~~~~~~~~~~~~~~~~~~~ 266 (376)
-|+|+.-+.+.|++.+=+.-|++|.||--|+.+. ++..++ ||. +-++ ++
T Consensus 409 pWDGPALl~FsDGry~GA~LDRNGLRP~Ryy~Ts----------------dd~v~~ASEV------------Gvv~--i~ 458 (2142)
T KOG0399|consen 409 PWDGPALLTFSDGRYCGAILDRNGLRPARYYITS----------------DDRVICASEV------------GVVP--IP 458 (2142)
T ss_pred CCCCceEEEecCCceeeeeeccCCCcceeeEEec----------------CCEEEEeecc------------cccC--CC
Confidence 8999999999999999999999999998777652 455555 997 2222 22
Q ss_pred hHHHhhhhCcceEEEeCCCcEEEEecC
Q psy240 267 DENLKKLKGARYVREVYPGEILEVSRT 293 (376)
Q Consensus 267 ~~~l~~~l~~~~i~~l~pG~~l~i~~~ 293 (376)
++-+- -+ -+|.||.++.++-.
T Consensus 459 ~~kVv----~K--gRL~PG~MllVD~~ 479 (2142)
T KOG0399|consen 459 PEKVV----QK--GRLKPGMMLLVDTE 479 (2142)
T ss_pred HHHhh----hc--cCcCCCeEEEEEcc
Confidence 22211 11 26899999998754
No 52
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices. Their exact function has not, as yet, been determined []. ; PDB: 1Q19_A 1Q15_D.
Probab=97.54 E-value=0.00044 Score=60.79 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=51.1
Q ss_pred EEEEEEeeecChHHHHHHHHhCCCCcccCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCcceEEEEEE-CCEEE
Q psy240 126 LAVAHNGEIVNAERLRRMVLSRGVGLSTRSDSELITQALCLNPPDGERDGPDWPARITHLMKLTPLSYSLVIME-KDRVF 204 (376)
Q Consensus 126 ~~~v~NGeI~N~~~L~~~L~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~g~~~~~~L~~~~~~l~G~fa~v~~d-~~~L~ 204 (376)
...-.-|.|||..-|+.-+..-.-....-+|+|++..++.+. |...+... .|.|.|.+-+ +++|.
T Consensus 49 ~tayLIGsiyNr~~L~~lag~~eg~a~v~nd~ElL~~~~~~l-------G~~aLsLA-------EGdfcffiE~kng~L~ 114 (201)
T PF09147_consen 49 GTAYLIGSIYNRRFLRGLAGMWEGHAYVLNDAELLYTIFTRL-------GNSALSLA-------EGDFCFFIEDKNGELT 114 (201)
T ss_dssp EEEEEES--S-HHHHHHHHTTT-GGGGG--HHHHHHHHHHHH--------GGGGGG---------SSEEEEEEETTSEEE
T ss_pred ccEEEEEEeccHHHHHHhhheeeccceeeccHHHHHHHHHHh-------hhhhhhhh-------cCceEEEEecCCCcEE
Confidence 344456999999877654411000112358999999999887 65544333 3999999998 58999
Q ss_pred EEEcCCCCCCcEEEEe
Q psy240 205 AVRDPYGNRPLCIGKI 220 (376)
Q Consensus 205 ~~RD~~G~rPLyy~~~ 220 (376)
+..|+.|..|.|+-..
T Consensus 115 l~Tds~G~~pv~lV~~ 130 (201)
T PF09147_consen 115 LITDSRGFNPVYLVQS 130 (201)
T ss_dssp EEE-SSSSS-EEEEES
T ss_pred EEecCCCCceEEEEec
Confidence 9999999999998774
No 53
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=95.07 E-value=0.009 Score=60.12 Aligned_cols=39 Identities=54% Similarity=0.837 Sum_probs=31.9
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDW 374 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~~ 374 (376)
+++.+.++..+.|.+||...- -++|++||||.||+.+++
T Consensus 419 gaDSL~yLslegL~~aig~~~--------~~~c~~cFtG~Yp~~~~~ 457 (470)
T COG0034 419 GADSLAYLSLEGLIKAIGRDN--------NDFCLACFTGEYPTGLPD 457 (470)
T ss_pred CCCceeeecHHHHHHHhCCCc--------cceeeEEecCccccCCcc
Confidence 556677777888999997753 379999999999999875
No 54
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=94.90 E-value=0.014 Score=60.13 Aligned_cols=44 Identities=43% Similarity=0.727 Sum_probs=31.8
Q ss_pred cchhhhHhhHHHHHHHhhhc-ccccccCCCcccccccccCCCcccCCCC
Q psy240 328 GADSLQYLSVEGLKQAVQLK-MKVDSAEGSFGHCTACLTGEYPEELDWY 375 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~r-l~~d~~vg~~~~~~~~~~g~~~~~~~~~ 375 (376)
+++.+.|+..+.|.+||... ..++.+ ++|++||||+||+.++.+
T Consensus 431 gadsl~yls~~~l~~a~~~~~~~~~~~----~~c~~cf~g~yp~~~~~~ 475 (479)
T PRK09123 431 GADSLAFLSIDGLYRAVGEEGRNPAAP----QYCDACFTGDYPTGLTDQ 475 (479)
T ss_pred CCCeEeccCHHHHHHHhcccccCCCCC----CccceeCCCCccCCCCcc
Confidence 56677788888899999632 111111 699999999999988654
No 55
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=93.84 E-value=0.028 Score=57.93 Aligned_cols=39 Identities=51% Similarity=0.941 Sum_probs=29.9
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDW 374 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~~ 374 (376)
+++.+.|+..+.|.+||... .. +||++||||+||+.++.
T Consensus 427 gadsl~yls~~~l~~a~~~~-------~~-~~c~~Cf~g~yp~~~~~ 465 (474)
T PRK06388 427 GADSLAFLSIDGLKQAIGIK-------EN-NLCLGCLTGIYPIDISK 465 (474)
T ss_pred CCCeeeccCHHHHHHHhcCC-------CC-CeeeeeCCCCcCCCCCH
Confidence 55677777778899998631 11 69999999999998764
No 56
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=93.74 E-value=0.037 Score=57.04 Aligned_cols=42 Identities=43% Similarity=0.752 Sum_probs=30.3
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
+++.+.|+..|.|.+||... .+.+.. ++|++||||.||+.++
T Consensus 419 gadsl~yls~e~l~~a~~~~--~~~~~~--~~c~~Cf~g~yp~~~~ 460 (471)
T PRK06781 419 GADSLTFLSEDGLVDAIGRP--YEGKYG--GLCMAYFNGDYPTALY 460 (471)
T ss_pred CCCEEeccCHHHHHHHhcCc--cCCCCC--CcccccCCCcCCCCCC
Confidence 56677788888899998621 111111 5999999999999876
No 57
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=93.49 E-value=0.039 Score=56.86 Aligned_cols=43 Identities=47% Similarity=0.845 Sum_probs=30.0
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDW 374 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~~ 374 (376)
+++.+.|+..+.|.+||..- .+.+- . ++|++||||+||+.++.
T Consensus 419 gadsl~yls~e~l~~a~~~~--~~~~~-~-~~c~~Cf~g~yp~~~~~ 461 (475)
T PRK07631 419 GADSLAFLSQEGLLEGIGRP--YESPN-C-GQCLACFTGQYPTEIYQ 461 (475)
T ss_pred CCCeEeccCHHHHHHHhccc--cCCCC-C-CcccccCCCcccCCCch
Confidence 55667777778899998621 11110 1 59999999999998764
No 58
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=93.26 E-value=0.043 Score=56.54 Aligned_cols=37 Identities=46% Similarity=0.838 Sum_probs=29.0
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
+++.+.|+..+.|.+||.. + -++|++||||.||+.++
T Consensus 424 g~dsl~~ls~~~l~~a~~~------~---~~~c~~cf~g~yp~~~~ 460 (469)
T PRK05793 424 GADSLGYLSIEGLLESLNG------D---KGFCLGCFNGVYPVSAP 460 (469)
T ss_pred CCCeEeccCHHHHHHHhcC------C---CCeeeeeCCCcccCCCc
Confidence 5667777778889999851 1 16999999999998874
No 59
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=92.95 E-value=0.056 Score=56.20 Aligned_cols=38 Identities=50% Similarity=0.870 Sum_probs=29.1
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
+++.+.|+..+.|.+||..- +. ++|++||||.||+.++
T Consensus 438 gadsl~yls~e~l~~a~~~~-------~~-~~c~~Cf~g~yp~~~~ 475 (510)
T PRK07847 438 GADSLGYISLDGMIAATEQP-------AS-RLCTACFDGVYPIELP 475 (510)
T ss_pred CCCeEeccCHHHHHHHhcCC-------CC-CeecccCCCcccCCCC
Confidence 56677777788899998521 11 6999999999998874
No 60
>PLN02440 amidophosphoribosyltransferase
Probab=92.64 E-value=0.053 Score=56.08 Aligned_cols=38 Identities=37% Similarity=0.721 Sum_probs=28.7
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
+++.+.++..+.|.+||.. .+ -++|++||||+||+.++
T Consensus 411 ~~dsl~~l~~~~l~~~~~~-----~~---~~~c~~cf~g~yp~~~~ 448 (479)
T PLN02440 411 GCDSLAFLPLEDLKKSLGE-----ES---PRFCYACFSGDYPVLPK 448 (479)
T ss_pred CCCEEEEecHHHHHHHHcC-----CC---CCeeeeeCCCCccCCCc
Confidence 4556667777888999852 11 16999999999999875
No 61
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=92.63 E-value=0.056 Score=55.23 Aligned_cols=37 Identities=68% Similarity=0.892 Sum_probs=28.4
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELDW 374 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~~ 374 (376)
+++.+.++..|.|.+|+.. -++|++||||+||+-+.+
T Consensus 405 g~dsl~~ls~e~l~~~~~~----------~~~c~~cf~g~yp~~~~~ 441 (442)
T PRK08341 405 GADSLAYLSVEGLKRAVGT----------EDLCMACLTGEYPEWAFD 441 (442)
T ss_pred CCCEEeccCHHHHHHHhCC----------CCeeeeeCCCCcceeecc
Confidence 4556667777788888861 169999999999987654
No 62
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=92.15 E-value=0.07 Score=55.33 Aligned_cols=38 Identities=45% Similarity=0.827 Sum_probs=28.6
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
+++.+.|+..+.|.+||.. + +. ++|++||||.||+.++
T Consensus 448 gadsl~yls~e~l~~a~~~------~-~~-~~c~~Cf~g~yp~~~~ 485 (500)
T PRK07349 448 GVDSLAYLSWEGMLEATGE------D-PN-SFCSACFTGDYPIPIP 485 (500)
T ss_pred CCCeEeccCHHHHHHHhcC------C-CC-CeecccCCCcccCCCc
Confidence 5667777777888888852 1 11 5999999999998773
No 63
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=91.51 E-value=0.086 Score=54.48 Aligned_cols=41 Identities=44% Similarity=0.762 Sum_probs=26.1
Q ss_pred chhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCcccCC
Q psy240 329 ADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEELD 373 (376)
Q Consensus 329 ~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~~~ 373 (376)
++.+.++-.+.|.+|+...-. .+ .-+||++||||.||+.++
T Consensus 422 ~dsl~~~~~~~l~~~~~~~~~--~~--~~~~c~~Cf~g~yp~~~~ 462 (484)
T PRK07272 422 ADSLTYLSVDGLIESIGLDTD--AP--NGGLCVAYFDGDYPTPLY 462 (484)
T ss_pred CCEEEEecHHHHHHHhCCCCC--CC--CCCeeceeCCCcccCCCC
Confidence 334444455667777753210 11 126999999999999876
No 64
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=90.53 E-value=0.14 Score=53.30 Aligned_cols=39 Identities=33% Similarity=0.487 Sum_probs=28.6
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCccc
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEE 371 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~ 371 (376)
+++.+.|+..+.|.+||... .+ -.-+||++||||+||+.
T Consensus 429 g~dsl~yls~~~l~~a~~~~----~~-~~~~~c~~cf~g~yp~~ 467 (501)
T PRK09246 429 GADGLIYQDLEDLIEAVREG----NP-DIKQFECSCFDGEYVTG 467 (501)
T ss_pred CCCeEeecCHHHHHHHhccC----CC-ccCCccccCCCCcccCC
Confidence 56677777788899999621 11 11269999999999986
No 65
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=89.14 E-value=0.19 Score=51.48 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=27.0
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCccc
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYPEE 371 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~~~ 371 (376)
+++.+.++..+.|.+||.. + -.+|++||||.||++
T Consensus 411 ~adsl~~ls~~~l~~~~~~------~---~~~c~~cf~g~yp~~ 445 (445)
T PRK08525 411 GADSLSFLSIDELTRSIGD------E---RKYSLASFDGDYFIK 445 (445)
T ss_pred CCCeEeccCHHHHHHHhCC------C---CCeeceecCCcccCC
Confidence 5666777777888999851 1 159999999999975
No 66
>KOG0572|consensus
Probab=86.09 E-value=0.29 Score=48.42 Aligned_cols=36 Identities=58% Similarity=1.007 Sum_probs=25.4
Q ss_pred cchhhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCc
Q psy240 328 GADSLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYP 369 (376)
Q Consensus 328 ~~~~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~ 369 (376)
+++.+.|+..|.|..+|+..-..+ -||++||||+||
T Consensus 427 gadsv~ylsve~Lv~~~~~~~~~~------~~c~acfTG~Yp 462 (474)
T KOG0572|consen 427 GADSVAYLSVEGLVDSVQTEDSTK------SFCTACFTGKYP 462 (474)
T ss_pred CCCeeEEeeHHHHHHhhcchhcCc------ceeeEEecccCC
Confidence 445556667788888888521111 199999999999
No 67
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=80.98 E-value=0.73 Score=47.22 Aligned_cols=31 Identities=58% Similarity=0.945 Sum_probs=20.4
Q ss_pred hhhHhhHHHHHHHhhhcccccccCCCcccccccccCCCc
Q psy240 331 SLQYLSVEGLKQAVQLKMKVDSAEGSFGHCTACLTGEYP 369 (376)
Q Consensus 331 ~~~~~~~~~l~~Av~~rl~~d~~vg~~~~~~~~~~g~~~ 369 (376)
.+.++-.+.|.+|+.. + . -++|++||||+||
T Consensus 412 ~l~~~~~~~l~~~~~~------~-~-~~~c~~cf~g~yp 442 (442)
T TIGR01134 412 SLAYLSLEGLKEAIGK------K-I-SDLCLACFTGEYP 442 (442)
T ss_pred EEEEecHHHHHHHhcC------C-C-CCeecccCCCcCC
Confidence 3444444566777652 1 1 2699999999998
No 68
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-terminal glutaminase domain catalyzes the hydrolysis of glutamine to glutamic acid and ammonia, and has a fold similar to that of other glutamine amidotransferases such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), and beta lactam synthetase (beta-LS), as well as the Ntn hydrolase folds of the proteasomal alpha and beta subunits.
Probab=36.93 E-value=36 Score=34.61 Aligned_cols=40 Identities=30% Similarity=0.537 Sum_probs=24.4
Q ss_pred eEEEEEEeCCCCCCccchHHHHHHHHHHHHhcCC--------CCcceEE
Q psy240 22 CGVFACVSTGTWPTQIDVAHTICMGLIALQHRGQ--------ESAGIVT 62 (376)
Q Consensus 22 CGI~G~~~~~~~~~~~~~~~~l~~~l~~l~hRG~--------D~~Gi~~ 62 (376)
|||--+...+..++- ++.+.-..+|..|.|||- ||+||.+
T Consensus 1 CGvG~va~~~g~~sh-~iv~~al~~L~~m~HRGa~~ad~~tGDGaGil~ 48 (413)
T cd00713 1 CGVGFVANIDGKPSH-DIVQDALEALERMEHRGGVGADGKTGDGAGILI 48 (413)
T ss_pred CeEEEEEECCCCchH-HHHHHHHHHHhhCcCCCcccCCCCCCCcceEec
Confidence 898555554443221 233445567889999995 5566654
No 69
>PRK11750 gltB glutamate synthase subunit alpha; Provisional
Probab=24.13 E-value=68 Score=37.80 Aligned_cols=43 Identities=21% Similarity=0.451 Sum_probs=26.3
Q ss_pred cccceEEEEEEeC-CCCCCccchHHHHHHHHHHHHhcCC--------CCcceEE
Q psy240 18 LTHECGVFACVST-GTWPTQIDVAHTICMGLIALQHRGQ--------ESAGIVT 62 (376)
Q Consensus 18 ~~~MCGI~G~~~~-~~~~~~~~~~~~l~~~l~~l~hRG~--------D~~Gi~~ 62 (376)
-++=||+ |++.. +..++ -++.+.-..+|..|.|||- ||+||-+
T Consensus 11 E~DaCGv-GfiA~i~G~~S-h~iV~~al~aL~~m~HRGa~gaD~~tGDGAGIl~ 62 (1485)
T PRK11750 11 ERDNCGF-GLIAHMEGEPS-HKLVRTAIHALARMTHRGGIAADGKTGDGCGLLL 62 (1485)
T ss_pred cccCCcc-eEEEEcCCCcc-HHHHHHHHHHHHhccCcCcccCCCCCCCcceeec
Confidence 3567997 66654 32221 1333445577899999995 6666665
Done!