BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2401
(363 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|152980990|ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacterium sp. Marseille]
gi|151281067|gb|ABR89477.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 363
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 218/363 (60%), Positives = 291/363 (80%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+DD + H++G+IN
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+D+ +EK I +ENKK ++ + +L+ LL+RI+ +L+++ P+R
Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDASKLVALLERIMPHLDEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EE+ IK L L+T KP ++V NV ++GF +N LLDQL YA +QN P++ ICA +
Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTDNPLLDQLTAYAKSQNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL DKK FL ++G++E L+ LIRA F LL L++YFT G KE+RAWTIP G T
Sbjct: 241 ESEIADLEEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TISY+D++ YKGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYEDYITYKGENGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|340785801|ref|YP_004751266.1| GTP-binding and nucleic acid-binding protein [Collimonas
fungivorans Ter331]
gi|340551068|gb|AEK60443.1| GTP-binding and nucleic acid-binding protein [Collimonas
fungivorans Ter331]
Length = 363
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/363 (59%), Positives = 289/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+DD + H++G+IN
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +VIQTEL L+D+ +EK I +ENKK ++ + +L+ LL+R++ L+++ P+R
Sbjct: 121 PLDDIDVIQTELALADMGTVEKAIHRENKKARSGDKDAAKLVALLERLMPELDQAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE+ IK L L+T KP ++VANV ++GF NN LLDQL YA +QN PI+ ICA +
Sbjct: 181 CGLDAEEMALIKPLCLITAKPAMYVANVSDHGFTNNPLLDQLTAYAASQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ DK FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIADLDEADKHEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+Y DF+ +KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAYDDFISHKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|445494507|ref|ZP_21461551.1| GTP-dependent nucleic acid-binding protein EngD [Janthinobacterium
sp. HH01]
gi|444790668|gb|ELX12215.1| GTP-dependent nucleic acid-binding protein EngD [Janthinobacterium
sp. HH01]
Length = 363
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 212/363 (58%), Positives = 291/363 (80%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD R+ L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGVVEVPDPRMGALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ AI++ VDIAGLV+GAS+GEGLGN+FL+HIRET+ +++V+RCF+DD + H++G+++
Sbjct: 61 ERMVNAIVEFVDIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+DL +EK I +ENKK ++ + +LL +++RI+ +LN++ P+R
Sbjct: 121 PLDDIEVIQTELALADLGTVEKAIHRENKKARSGDKDAAKLLAIMERIVPHLNEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +E+ IK L L+T KP ++VANV + GFKNN LLDQL YA QN PI+ ICA +
Sbjct: 181 MGLDADEMALIKPLCLITAKPAMYVANVSDTGFKNNPLLDQLTAYAATQNAPIVAICASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKTAFLSDMGMEEPGLDRLIRAAYKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y D++ YKGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDYIQYKGEGGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|134096056|ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicoxydans]
gi|133739959|emb|CAL63010.1| GTP-dependent nucleic acid-binding protein EngD [Herminiimonas
arsenicoxydans]
Length = 363
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 291/363 (80%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+DD + H++G+IN
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+D+ +EK I +ENKK ++ + +L+ LL+RI+ +L+++ P+R
Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDAGKLVALLERIMPHLDEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EE+ IK L L+T KP ++V NV ++GF NN LLDQL YA +QN P++ ICA +
Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTNNPLLDQLTEYAKSQNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ DKK FL ++G++E L+ LIRA F LL L++YFT G KE+RAWTI G T
Sbjct: 241 ESEIAELDEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RG+IRA TI+Y+DF+ +KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 GPQAAGVIHTDFERGYIRAQTIAYEDFIKFKGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|329908412|ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae
bacterium IMCC9480]
gi|327546718|gb|EGF31666.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae
bacterium IMCC9480]
Length = 363
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 212/363 (58%), Positives = 287/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD R+ L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRMDALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+DD + H++G IN
Sbjct: 61 QRAVPTTVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+D+A +EK I +E+KK ++ + +L+ +L+RI+ L+ ++P+R
Sbjct: 121 PLDDIEVIQTELALADMAAVEKAIHRESKKARSGDKDAAKLVVILERIMPQLDLALPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EE+ IK L L+T KP ++V NV + GF NN LLDQL YA QN P++ ICA +
Sbjct: 181 MGLDAEEMALIKPLCLITAKPAMYVGNVSDTGFTNNPLLDQLTEYAKKQNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EISDL + DK FL ++G+ E L+ LIR++++LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEISDLEDADKAEFLADMGMTEPGLDRLIRSAYTLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ +KGE G K+AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITFKGEAGAKDAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|427399525|ref|ZP_18890763.1| GTP-binding protein YchF [Massilia timonae CCUG 45783]
gi|425721287|gb|EKU84200.1| GTP-binding protein YchF [Massilia timonae CCUG 45783]
Length = 363
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/363 (58%), Positives = 288/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD R+ L+ IVK
Sbjct: 1 MTLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGVVEVPDPRIDALSAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ AI++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERVVKAIVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+D+ +EK I +E KK ++ + +L+ LL+R++ +LN+ P+R
Sbjct: 121 PIDDIEVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERLMPHLNEGQPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EE+ I L+L+T KP +FVANV + GF NN LLDQL +A+ QN PI+ ICA +
Sbjct: 181 MGLDKEEMAIIYPLHLITAKPAMFVANVSDTGFTNNPLLDQLTEFANKQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+++++ DK FL+++G+ E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIAEMDDADKVDFLNDMGMDEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TISY DFL YKGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYDDFLTYKGESGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|395760761|ref|ZP_10441430.1| GTP-binding protein YchF [Janthinobacterium lividum PAMC 25724]
Length = 363
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/363 (58%), Positives = 287/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD R+ L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGVVEVPDPRMDALAVIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ AI++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+DD + H++G+IN
Sbjct: 61 ERMVNAIVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDDNVIHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+D+ +EK I +ENKK ++ + +LL +++R++ LN + P+R
Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDAAKLLAIMERMMPYLNDAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +E+ IK L L+T KP +FVANV + GF NN LLDQL YA +QN PI+ ICA +
Sbjct: 181 MGLDADEMELIKPLCLITAKPAMFVANVSDTGFTNNPLLDQLTAYAQSQNAPIVAICASM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ DK FL ++G++E L+ LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDAADKGAFLADMGMQEPGLDRLIRAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y DF+ +KGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDFIAFKGEAGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398835234|ref|ZP_10592599.1| GTP-binding protein YchF [Herbaspirillum sp. YR522]
gi|398216809|gb|EJN03350.1| GTP-binding protein YchF [Herbaspirillum sp. YR522]
Length = 363
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/363 (57%), Positives = 289/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLTALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+D+ +EK I +E KK ++ + +L+ LL+RI+ L+++ P+R
Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EE++ IK L L+T KP ++VANV ++GF +N LLDQL YA QN PI+ ICA +
Sbjct: 181 LNLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAKEQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIADLDDADKIDFLADMGMQEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+Y+D++ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAYEDYIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|415909464|ref|ZP_11553139.1| GTP-dependent nucleic acid-binding protein [Herbaspirillum
frisingense GSF30]
gi|407762585|gb|EKF71407.1| GTP-dependent nucleic acid-binding protein [Herbaspirillum
frisingense GSF30]
Length = 370
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 288/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 8 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 67
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G ++
Sbjct: 68 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 127
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+D+ +EK I +E KK ++ + +L+ LL+RI+ L+++ P+R
Sbjct: 128 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 187
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE++ IK L L+T KP ++VANV ++GF NN LLDQL YA QN PI+ ICA +
Sbjct: 188 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTNNPLLDQLTGYAKEQNAPIVAICAAI 247
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 248 EAEIADLDDADKVDFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 307
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+++D++ KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 308 GPQAAGVIHTDFERGFIRAQTIAFEDYIACKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 367
Query: 361 FNI 363
FN+
Sbjct: 368 FNV 370
>gi|399019247|ref|ZP_10721396.1| GTP-binding protein YchF [Herbaspirillum sp. CF444]
gi|398098394|gb|EJL88681.1| GTP-binding protein YchF [Herbaspirillum sp. CF444]
Length = 363
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 208/363 (57%), Positives = 283/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+G++EVPD RL+ L +IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H+SG+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+D+ +EK I +E KK ++ + +L+ LL+RI+ L+ + P+R
Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE+ IK L L+T KP ++VANV + GF N LLDQL YA Q PI+ ICA +
Sbjct: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTGNPLLDQLTAYAKEQGAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAGFKLLGLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+Y+D++ YKGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAYEDYIAYKGEAGAKEAGKMRAEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|237749586|ref|ZP_04580066.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter
formigenes OXCC13]
gi|229380948|gb|EEO31039.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter
formigenes OXCC13]
Length = 363
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/363 (59%), Positives = 284/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+GI+EVPD RL L +IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGIVEVPDNRLNDLASIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLAHIRET+ ++ V+RCF++D + H++G+++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVQVVRCFQNDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+DL +E+ I +E KK N+ S L +L+R+ +LNK+ P+R
Sbjct: 121 PLSDIEVIQTELALADLNTVERTIAREIKKAQSGNKESARLCNILERVAAHLNKAEPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EE+ I+ L L+T KP ++VANV E+GF +N LLDQLK YA +QN PI+ ICA +
Sbjct: 181 MGLDKEEMELIRPLCLITAKPTMYVANVSEDGFTDNPLLDQLKQYAESQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L D+ FL ++G+ E LN LIRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIVELPEEDRAEFLSDMGMDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TIS+ D++ KGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISFDDYITCKGEVGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|237747437|ref|ZP_04577917.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter
formigenes HOxBLS]
gi|229378788|gb|EEO28879.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter
formigenes HOxBLS]
Length = 363
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/363 (58%), Positives = 284/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGIVEVPDPRLNELAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLAHIRET+ ++ V+RCF++D + H++G+++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVQVVRCFQNDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+DL +EK I +E KK N+ S L LL+++ +LNK+ P+R
Sbjct: 121 PLSDIAVIQTELALADLNTVEKVIQREIKKAGSGNKESARLCDLLEKVAAHLNKAEPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ E++ ++ L L+T KP ++VANV ++GF NN LLDQLK YA +QN PI+ ICA +
Sbjct: 181 MGLDKEQMELLRPLCLITAKPTMYVANVSDDGFTNNPLLDQLKHYAVSQNAPIVTICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L D+ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIVELPEEDRAEFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHAGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TIS++D++ YKGE G K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTISFEDYIAYKGETGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|393777958|ref|ZP_10366246.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia sp. PBA]
gi|392715009|gb|EIZ02595.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia sp. PBA]
Length = 364
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLDALAGIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D+ + H++G+I+
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFADENVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + K N+ + ++ +L+R + LN++ P+R
Sbjct: 121 PLSDIEVINTELALADLGTVEKTLQRNAKAAKSGNDKEAARMVAVLERCVEQLNQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
M L++EE +K L L+T KP ++VANVKE+GF+NN LD ++ YA +N P++ +CA
Sbjct: 181 GMDLSDEERALLKPLCLITAKPAMYVANVKEDGFENNPHLDAVRAYADKENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+D+++ DK FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWT+P G
Sbjct: 241 IEAEIADMDDADKLEFLSDMGMDEPGLNRVIRAGFRLLGLQTYFTAGVKEVRAWTVPIGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI + DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIGFDDFIAYKGEQGAKEAGKMRAEGKEYIVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|409407919|ref|ZP_11256370.1| GTP-binding protein [Herbaspirillum sp. GW103]
gi|386433670|gb|EIJ46496.1| GTP-binding protein [Herbaspirillum sp. GW103]
Length = 363
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 289/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+D+ +EK I +E KK ++ + +L+ LL+RI+ L+++ P+R
Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE++ IK L L+T KP ++VANV ++GF +N LLDQL YA QN PI+ ICA +
Sbjct: 181 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+++DF+ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|149925757|ref|ZP_01914021.1| hypothetical protein LMED105_06017 [Limnobacter sp. MED105]
gi|149825874|gb|EDM85082.1| hypothetical protein LMED105_06017 [Limnobacter sp. MED105]
Length = 363
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 283/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L ++VK
Sbjct: 1 MTLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGMVEVPDARLQQLADVVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVNGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I+TEL L+D+ +EK + + K+ ++ + +LL +L+R LN++ P+R
Sbjct: 121 PLSDIETIETELCLADMGTVEKAVHRYAKQARANDKEAAKLLAILQRCEAQLNEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK L+T KP ++VANV E+GF+NN L++L+ YA QN P++ +CA +
Sbjct: 181 LGLDEEELFAIKSFGLITAKPAMYVANVAEDGFENNPFLERLQEYAAKQNAPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + DK FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLEDADKMEFLADMGMTEPGLNRVIRAGFKLLGLQTYFTAGPKEVRAWTIKIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI++ D++ +KGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAFDDYIQFKGENGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|337281088|ref|YP_004620560.1| GTP-dependent nucleic acid-binding protein [Ramlibacter
tataouinensis TTB310]
gi|334732165|gb|AEG94541.1| candidate GTP-dependent nucleic acid-binding protein [Ramlibacter
tataouinensis TTB310]
Length = 362
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 204/362 (56%), Positives = 282/362 (77%), Gaps = 1/362 (0%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+E+PD RL L IVK ++
Sbjct: 1 MKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVELPDPRLARLAAIVKPER 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF D + H++G+++P+
Sbjct: 61 VVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFDDPNVIHVAGKVDPV 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIRLM 181
D EVIQTEL L+DL ++K + + K N+ + + +LL ++ L++ P+R +
Sbjct: 121 ADIEVIQTELCLADLGTVDKALARYAKAAKSGNDKEAARMAQLLPKVQAALDEGRPVRTV 180
Query: 182 SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLE 241
L +EE +K L L+T KP +FV NV ENGF+NN LD+L+ YA QN P+++ICAK+E
Sbjct: 181 PLTDEEKALLKPLFLITAKPAMFVGNVDENGFENNPFLDRLREYAAGQNAPVVVICAKME 240
Query: 242 EEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTA 301
E++D++ DKK FL +G +E LN LIRA+F LL L+TYFT G+KE+RAWT+ G TA
Sbjct: 241 AEMADMDEEDKKMFLAEIGQQEPGLNRLIRAAFKLLGLQTYFTAGEKEVRAWTVRTGATA 300
Query: 302 EQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLF 361
QAAG+IHTD +RGFIRA TI++ D+L +KGEQG K+AG++RSEGK+Y+V+DGD++NFLF
Sbjct: 301 PQAAGVIHTDFERGFIRAQTIAFDDYLQFKGEQGAKDAGRMRSEGKEYVVKDGDVMNFLF 360
Query: 362 NI 363
N+
Sbjct: 361 NV 362
>gi|300313366|ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
gi|300076151|gb|ADJ65550.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
Length = 364
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/362 (57%), Positives = 287/362 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VIQTEL L+D+ +EK I +E KK ++ + +L+ LL+RI+ L+++ P+R
Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE++ IK L L+T KP ++VANV ++GF +N LLDQL YA QN PI+ ICA +
Sbjct: 181 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAKEQNAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFRLLGLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD +RGFIRA TI+++DF+ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGEAGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F
Sbjct: 361 FT 362
>gi|348589683|ref|YP_004874145.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella
asinigenitalis MCE3]
gi|347973587|gb|AEP36122.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella
asinigenitalis MCE3]
gi|399116209|emb|CCG19014.1| predicted GTP-binding protein [Taylorella asinigenitalis 14/45]
Length = 363
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 284/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLEKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ V+HV+RCF+D + H++G ++
Sbjct: 61 ERVLPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFEDGNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL LSDLA EK + K K ++ + +L+ +L++I+ +LN++ IR
Sbjct: 121 PVSDIEVINTELALSDLATAEKALLKNQKVARAGDKEAQKLVAVLEKIVPHLNEAKAIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E+ +IK +T KP ++VANV+E+GF+NN L+ ++ YA +N P+I +CA +
Sbjct: 181 LGLDEDEMHAIKSFGFITAKPCMYVANVREDGFENNPHLEAVQKYAAAENSPVISVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK+ FL ++G+ E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDEDKEMFLADMGMDEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIRKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TISY DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTISYDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|377821767|ref|YP_004978138.1| GTP-binding protein YchF [Burkholderia sp. YI23]
gi|357936602|gb|AET90161.1| GTP-binding protein YchF [Burkholderia sp. YI23]
Length = 364
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 287/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLTALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + +K N+ + +L+ +L+++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLATVEKAYTRYSKAAKSGNDKEAAKLVAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL +EE ++IK L L+T KP ++VANVK++GF+NN LD ++ +A +N P++ +CA
Sbjct: 181 GLSLTDEEQLTIKPLCLITSKPTMYVANVKDDGFQNNPYLDAVRKHAEAENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKQDFLADMGMDEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTISFDDYVAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|319779118|ref|YP_004130031.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella
equigenitalis MCE9]
gi|317109142|gb|ADU91888.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella
equigenitalis MCE9]
Length = 363
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 283/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ V+HV+RCF+D + H++G ++
Sbjct: 61 ERVLPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFEDSNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL LSDLA EK + K K ++ + +++ +L++++ +LN++ IR
Sbjct: 121 PVSDIEVINTELALSDLATAEKALLKNQKVARAGDKEAQKMVAVLEKVVPHLNEAKAIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK +T KP ++VANV+E+GF+NN L+ ++ YA +N P+I +CA +
Sbjct: 181 LGLDADELHAIKSFGFITAKPCMYVANVREDGFENNPHLEAVQKYAAAENSPVISVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK+ FL ++G+ E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDEDKEMFLADMGMDEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TISY DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTISYDDFIQYKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|334132964|ref|ZP_08506719.1| GTP-dependent nucleic acid-binding protein EngD [Methyloversatilis
universalis FAM5]
gi|333441874|gb|EGK69846.1| GTP-dependent nucleic acid-binding protein EngD [Methyloversatilis
universalis FAM5]
Length = 363
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 288/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D+ + H++G ++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDENVVHVNGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +E+ I ++ KK ++ + +L+ +L++++ +LN+ P R
Sbjct: 121 PIADIETIVTELALADLAAVERTIARDGKKAKSGDKDAQKLVAVLEKLLPHLNEGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++++ + IK L LLTIKP ++V NV E+GF+NN LD+L+ +A + P++ +CAK+
Sbjct: 181 LGLSDDDKVIIKPLCLLTIKPAMYVGNVLEDGFENNPYLDRLREFAAKEGAPVVSVCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL + DKK FL +LGL E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLEDEDKKAFLADLGLDEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+++DF+ YKGEQG K AGK+R+EGK+Y+V DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFEDFIAYKGEQGAKEAGKMRAEGKEYVVRDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|397661359|ref|YP_006502059.1| putative GTP-binding protein [Taylorella equigenitalis ATCC 35865]
gi|394349538|gb|AFN35452.1| putative GTP-binding protein [Taylorella equigenitalis ATCC 35865]
gi|399115685|emb|CCG18488.1| predicted GTP-binding protein [Taylorella equigenitalis 14/56]
Length = 363
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 283/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ V+HV+RCF+D + H++G ++
Sbjct: 61 ERVLPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFEDSNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL LSDLA EK + K K ++ + +++ +L++++ +LN++ IR
Sbjct: 121 PVSDIEVINTELALSDLATAEKALLKNQKVARAGDKEAQKMVAVLEKVVPHLNEAKAIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK +T KP ++VANV+E+GF+NN L+ ++ YA +N P+I +CA +
Sbjct: 181 LGLDADELHAIKSFGFITAKPCMYVANVREDGFENNPHLEAVQNYAAAENSPVISVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK+ FL ++G+ E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDEDKEMFLADMGMDEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TISY DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTISYDDFIQYKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|388567586|ref|ZP_10154017.1| hypothetical protein Q5W_2354 [Hydrogenophaga sp. PBC]
gi|388265191|gb|EIK90750.1| hypothetical protein Q5W_2354 [Hydrogenophaga sp. PBC]
Length = 363
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 284/362 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L +V+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAKVVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ ++V+RCF+D + H++G+++
Sbjct: 61 QRIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDATVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DL+ +EK + + K ++ + +LL +L++ LN++ P+R
Sbjct: 121 PIADIEVIQTELCLADLSTVEKSVQRAQKTARAGDKEAQKLLVVLEKCQAALNEARPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ IK L L+T KP +FVANV E+GF+NN LLD+LK YA Q P++ ICAKL
Sbjct: 181 LDLSKEDRALIKPLFLITAKPAMFVANVAEDGFENNPLLDRLKAYAEAQQAPVVAICAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++N+ D++ FL+ +GL+E L+ LIRA++ LL L+TYFT G+KE+RAWTI G T
Sbjct: 241 EAEMAEMNDEDRQMFLEEMGLEEPGLHRLIRAAYGLLGLQTYFTAGEKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI++ D++ + GEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAFDDYIAHGGEQGAKEAGKMRAEGKDYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|312795910|ref|YP_004028832.1| GTP-binding protein, translation factor [Burkholderia rhizoxinica
HKI 454]
gi|312167685|emb|CBW74688.1| GTP-binding protein, probable translation factor [Burkholderia
rhizoxinica HKI 454]
Length = 364
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDSRLDALAQIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF DD + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFDDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +++L +L ++ L+++ P+R
Sbjct: 121 PLADIEVIHTELALADLATVEKALARYSKAAKSGNDKEAVKLAAVLDKVRAQLDQARPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
M L+++E IK L+T KP ++VANV+E+GF+NN LD ++ YA + P++ +CA
Sbjct: 181 AMDLSDDERALIKPFCLITAKPTMYVANVREDGFENNPYLDAVRGYAAQEGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI++L + +K FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIAELPDDEKGIFLSDMGMDEPGLNRVIRAGFRLLGLQTYFTAGVKEVRAWTIHVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TISY D+++YKGEQG K AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTISYDDYIVYKGEQGAKEAGKMRAEGKEYVVQDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|171056962|ref|YP_001789311.1| GTP-binding protein YchF [Leptothrix cholodnii SP-6]
gi|170774407|gb|ACB32546.1| GTP-binding protein YchF [Leptothrix cholodnii SP-6]
Length = 364
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++E+PD RL+ L IV+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLQGLAQIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGNKFL+HIRET+ +++V+RCF+DD + H++G+I+
Sbjct: 61 ERILPAIVEFVDIAGLVAGASQGEGLGNKFLSHIRETDAIVNVVRCFEDDNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL +EK + + K N+ + L+K+L++ L+++ P+R
Sbjct: 121 PISDIEVIQTELCLADLGTVEKTLHRSLKAARSGNDKEAAALVKVLEKCQAALDQAQPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EEL+ +K L L+T KP +FV NV E GF+NN LD+LK +A QN P++ ICAK
Sbjct: 181 SLDFSKEELVILKPLCLITAKPAMFVGNVDETGFENNPFLDRLKEFAAKQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E E++++ + D+ FL +G E LN LIRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEAELAEMEDDDRAMFLAEMGQDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFITFKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|120609581|ref|YP_969259.1| GTP-binding protein YchF [Acidovorax citrulli AAC00-1]
gi|120588045|gb|ABM31485.1| GTP-binding protein YchF [Acidovorax citrulli AAC00-1]
Length = 364
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL+ L I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAGIITP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL I L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVSLLTPIQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ ++ E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA QN P++ ICAK
Sbjct: 181 TVPVSKEDAPLLKQFCLITAKPAMFVGNVAEDGFENNPLLDRLKEYAAAQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E+S++++ D+ FL +G E LN LIRA F LL L+TYFT G KE+RAWT+P G
Sbjct: 241 IESEMSEMSDEDRDMFLAEMGQDEPGLNRLIRAGFRLLGLQTYFTAGVKEVRAWTVPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIAFKGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|115350483|ref|YP_772322.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
ambifaria AMMD]
gi|172059514|ref|YP_001807166.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
ambifaria MC40-6]
gi|115280471|gb|ABI85988.1| GTP-binding protein YchF [Burkholderia ambifaria AMMD]
gi|171992031|gb|ACB62950.1| GTP-binding protein YchF [Burkholderia ambifaria MC40-6]
Length = 364
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 289/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + +K N+ +++L +L+++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLATVEKALTRYSKAAKSGNDKEAVKLAAVLEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLDLSDEEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVSYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|326315655|ref|YP_004233327.1| GTP-binding protein YchF [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323372491|gb|ADX44760.1| GTP-binding protein YchF [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 364
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL+ L I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAGIITP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL I L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVSLLTPIQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ ++ E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA QN P++ ICAK
Sbjct: 181 TVPVSKEDAPLLKQFCLITAKPAMFVGNVAEDGFENNPLLDRLKEYAAAQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E+S++++ D+ FL +G E LN LIRA F LL L+TYFT G KE+RAWT+P G
Sbjct: 241 IESEMSEMSDEDRDLFLAEMGQDEPGLNRLIRAGFKLLGLQTYFTAGVKEVRAWTVPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIAFKGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|311108745|ref|YP_003981598.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter
xylosoxidans A8]
gi|310763434|gb|ADP18883.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter
xylosoxidans A8]
Length = 363
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + K ++ S ++ +L++ I LN++ PIR
Sbjct: 121 PIADIEVIETELALADLQTAEKALQRHQKTARSGDKESQRIVAVLEKCIAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLTTEEKADIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLSEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|257094307|ref|YP_003167948.1| GTP-binding protein YchF [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046831|gb|ACV36019.1| GTP-binding protein YchF [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 363
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 287/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAQLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ ++ V+RCF+D + H+SG ++
Sbjct: 61 QRVQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDAIVSVVRCFEDANVVHVSGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DLA +E+ +++++KK ++ + +L+ +L+R++ +LN+ +P R
Sbjct: 121 PLSDIETIMTELALADLAAVERTLNRDSKKARAGDKDAQKLVGVLERLLPHLNEGLPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +E +K L LLTIKP+++V NV E+GF NN LD+L+ +A + P++ +CAK+
Sbjct: 181 LALSTDEKALLKPLCLLTIKPMMYVGNVLEDGFDNNPHLDRLREHAAAEGAPVVALCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL++ DK+ FL +LGL E LN L+RA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLDDEDKQAFLADLGLDEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+ DFL KGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIALADFLACKGEQGAKEAGKMRAEGKDYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422319806|ref|ZP_16400879.1| GTP-dependent nucleic acid-binding protein [Achromobacter
xylosoxidans C54]
gi|317405481|gb|EFV85790.1| GTP-dependent nucleic acid-binding protein [Achromobacter
xylosoxidans C54]
Length = 363
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + K ++ S ++ +L++ + LN++ PIR
Sbjct: 121 PIADIEVIETELALADLQTAEKALQRHQKTARSGDKESQRIVAVLEKCVAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLSTEEKADIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350544874|ref|ZP_08914409.1| GTP-binding and nucleic acid-binding protein YchF [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527336|emb|CCD38291.1| GTP-binding and nucleic acid-binding protein YchF [Candidatus
Burkholderia kirkii UZHbot1]
Length = 361
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 286/363 (78%), Gaps = 2/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDTRLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+ ASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 ERILPAVVEFVDIAGLVASASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+DLA +EK + + +K ++ +I L+ +L+++ L+++ P+R
Sbjct: 121 PIGDIEVINTELALADLATVEKALPRYSKSG--NDKEAIRLVAVLEKVRAQLDQAKPVRG 178
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SLN+EEL+ IK L+T KP ++VANVK++GF+NN LD ++ +A +N P++ +CA +
Sbjct: 179 LSLNDEELLLIKPFCLITSKPTMYVANVKDDGFENNPYLDAVRKHAEAENAPVVAVCAAI 238
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DKK FL ++G++E LN +IRA F LL L TYFT G KE+RAWTI G T
Sbjct: 239 EAEIADLDDADKKEFLADMGMEEPGLNRVIRAGFKLLGLHTYFTAGVKEVRAWTIHIGDT 298
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++ FL
Sbjct: 299 APQAAGAIHTDFERGFIRAQTISFDDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMTFL 358
Query: 361 FNI 363
FN+
Sbjct: 359 FNV 361
>gi|359799749|ref|ZP_09302302.1| GTP-binding protein YchF [Achromobacter arsenitoxydans SY8]
gi|359362175|gb|EHK63919.1| GTP-binding protein YchF [Achromobacter arsenitoxydans SY8]
Length = 363
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + K ++ + ++ +L++ I LN++ PIR
Sbjct: 121 PIADIEVIETELALADLQTAEKALQRHQKTARSGDKEAQRIVAVLEKCIAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLSTEEKADIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|241764112|ref|ZP_04762149.1| GTP-binding protein YchF [Acidovorax delafieldii 2AN]
gi|241366576|gb|EER61064.1| GTP-binding protein YchF [Acidovorax delafieldii 2AN]
Length = 364
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 280/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKQLAEIISP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+D+ ++K +++ K N+ + +L+ LL RI LN+ P R
Sbjct: 121 PIADIEVIQTELCLADMGTVDKALNRYTKAAKSGNDKDAAKLVALLTRIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EE +K L L+T KP +FV NV E+GF+NN LD+LK YA +QN P++ ICAK
Sbjct: 181 SVEITKEEQPLLKSLCLITAKPAMFVGNVSEDGFENNPFLDRLKDYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL +G E L LIR +F LL L+TYFT G KE+RAWTI G
Sbjct: 241 MEAEMAEMSDEDRDMFLAEMGQSEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TIS+ DF+ YKGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTISFDDFIAYKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|121607462|ref|YP_995269.1| GTP-binding protein YchF [Verminephrobacter eiseniae EF01-2]
gi|121552102|gb|ABM56251.1| GTP-binding protein YchF [Verminephrobacter eiseniae EF01-2]
Length = 364
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 279/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++E+PD RL L IV
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVELPDPRLGQLAAIVAP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+D+A +EK +++ K N+ + L+ LL RI LN+ +P R
Sbjct: 121 PISDIEVIQTELCLADMATVEKALNRHTKAAKSGNDKDAARLVALLTRIRTALNQGLPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE +K L L+T KP +FVANV E+GF+NN L++L YA +QN P++ ICAK
Sbjct: 181 SVDLAKEEQPLLKPLCLITAKPTMFVANVGEDGFRNNPFLERLNEYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D++ FL +G E L LIR +F LL L+TYFT G KE+RAWTIP G
Sbjct: 241 MEAEMAEMSDADRQLFLAEMGQSEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIPIGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ +GEQG ++AGK+R+EGK Y V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIACQGEQGARDAGKMRAEGKDYRVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|365093248|ref|ZP_09330315.1| GTP-binding protein YchF [Acidovorax sp. NO-1]
gi|363414631|gb|EHL21779.1| GTP-binding protein YchF [Acidovorax sp. NO-1]
Length = 364
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLQQLAEIISP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+D+ +EK +++ K N+ + +L+ LL RI LN+ P R
Sbjct: 121 PISDIEVIQTELCLADMGTVEKALNRYTKAAKSGNDKDAAKLVALLTRIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EE +K L L+T KP +FV NV E+GF+NN LD+LK YA +QN P++ ICAK
Sbjct: 181 SVEVTKEEQPLLKSLCLITAKPAMFVGNVSEDGFENNPFLDRLKEYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL +G E L LIR +F LL L+TYFT G KE+RAWTI G
Sbjct: 241 MEAEMAEMSDEDRDMFLAEMGQTEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ YKGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIAYKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|145588330|ref|YP_001154927.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046736|gb|ABP33363.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 364
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/364 (56%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H++G+I+
Sbjct: 61 ERVLPAAVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDPNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D VI TEL LSDLA +EK +++ +K N+ + L+ +L ++ +L+ ++P+R
Sbjct: 121 PIADIGVIDTELALSDLATVEKTLNRSSKAAKSGNDKEAAALVAVLTKVQAHLDSALPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
M+L ++E + IK L L+T KP ++VANVKE+GF+NN L+ +K +A +N P++ +CA
Sbjct: 181 SMNLTDDEKLLIKPLCLITAKPAMYVANVKEDGFENNPHLEAVKQHAAKENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+++DK FL +LG+ E L+ +IRA ++LL L TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDVDKTEFLADLGMAEPGLDRVIRAGYALLGLHTYFTAGVKEVRAWTIHQGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ +KGE G K AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIQFKGESGAKEAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|407940639|ref|YP_006856280.1| GTP-binding protein YchF [Acidovorax sp. KKS102]
gi|407898433|gb|AFU47642.1| GTP-binding protein YchF [Acidovorax sp. KKS102]
Length = 364
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLQQLAEIIHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL +EK +++ K N+ + +L+ LL RI LN+ P R
Sbjct: 121 PISDIEVIQTELCLADLGTVEKALNRYTKAAKSGNDKDAAKLVALLTRIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EE +K L L+T KP +FV NV E+GF+NN LD+LK YA +QN P++ ICAK
Sbjct: 181 SVEITKEEQPLLKSLCLITAKPAMFVGNVSEDGFENNPFLDRLKDYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL +G E L LIR +F LL L+TYFT G KE+RAWTI G
Sbjct: 241 MEAEMAEMSDEDRDMFLAEMGQTEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++DF+ YKGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDFIAYKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|374370515|ref|ZP_09628517.1| GTP-binding protein YchF [Cupriavidus basilensis OR16]
gi|373097935|gb|EHP39054.1| GTP-binding protein YchF [Cupriavidus basilensis OR16]
Length = 363
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 284/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +VK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDTRLAKLAEVVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL+ +EK + K ++ ++ L+ +L + LN++ +R
Sbjct: 121 PLSDIEVINTELALADLSTVEKAHARYIKPARAGDKEALRLVAVLDKAQAVLNEAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE +IK L L+T KP ++VANV+E+GF+NN LD ++ +A P++ +CA +
Sbjct: 181 LDLSDEEWAAIKPLCLITAKPTMYVANVREDGFENNPHLDAVRAHAAKTKSPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F+LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDEDKAVFLADLGMEEPGLDRVIRAGFTLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|170700437|ref|ZP_02891444.1| GTP-binding protein YchF [Burkholderia ambifaria IOP40-10]
gi|170134649|gb|EDT02970.1| GTP-binding protein YchF [Burkholderia ambifaria IOP40-10]
Length = 364
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ +++L +L+++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAVKLAAVLEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLDLSDEEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVSYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|301631035|ref|XP_002944615.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
[Xenopus (Silurana) tropicalis]
Length = 364
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+A NYPFCTIEPN G++EVPD RL L+ +V+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAANYPFCTIEPNTGVVEVPDPRLAALSAVVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK + + +K N+ + +L++LL I L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALQRYSKAAKSGNDKEAAKLVQLLTPIQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++++ E+ +K L L+T KP +FV NV E+GF NN LLD+L+ YA QN P++ ICAK
Sbjct: 181 AVAVSKEDAPLLKPLCLITAKPAMFVGNVSEDGFGNNPLLDRLRDYAAVQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL+ +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 IESEMAEMGDEDRAMFLEEMGLEEAGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TIS+ DF+ Y+GEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTISFDDFIHYQGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|121595910|ref|YP_987806.1| GTP-binding protein YchF [Acidovorax sp. JS42]
gi|222112098|ref|YP_002554362.1| GTP-binding protein ychf [Acidovorax ebreus TPSY]
gi|120607990|gb|ABM43730.1| GTP-binding protein YchF [Acidovorax sp. JS42]
gi|221731542|gb|ACM34362.1| GTP-binding protein YchF [Acidovorax ebreus TPSY]
Length = 364
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL+ L I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAEIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK + + +K N+ + +L++LL I L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALQRYSKAAKSGNDKEAAKLVQLLTPIQAALDEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ ++ E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA Q P++ ICAK
Sbjct: 181 TVPVSKEDAPLLKQFCLITAKPAMFVGNVAEDGFENNPLLDKLKAYAEAQGAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL +GL+E LN LIRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEMAEMGDEDRDMFLQEMGLEEPGLNRLIRAGFKLLGLQTYFTAGVKEVRAWTIHVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++DF+ YKGEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDFIQYKGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|186477456|ref|YP_001858926.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
phymatum STM815]
gi|184193915|gb|ACC71880.1| GTP-binding protein YchF [Burkholderia phymatum STM815]
Length = 364
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + K N+ +++L +L+++ L+++ P+R
Sbjct: 121 PVSDIEVINTELALADLATVEKALTRYAKAAKSGNDKEAVKLAAVLEKVRVQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE + IK L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLTEEERLLIKPFCLITAKPAMYVANVKEDGFENNPHLDAVRNYAESEKAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL + DK+ FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLADEDKEVFLADMGMDEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TI + D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTIGFDDYIAYKGEQGAKEAGKMRAEGKEYIVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|260220077|emb|CBA27255.1| GTP-dependent nucleic acid-binding protein engD [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 363
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/362 (56%), Positives = 283/362 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L +I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLQQLADIITP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ I+V+RCF+DD + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DL +EK + + K ++ S++L+ +L+R LN++ P+R
Sbjct: 121 PIADIEVIQTELCLADLGAVEKALHRVTKLARSGDKESVKLVSILERCQTALNEAKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EEL +K L+T KP +FVANV E+GF+NN LLD+L +A Q P++ ICAK+
Sbjct: 181 IDFSKEELPLLKQFFLITAKPAMFVANVSEDGFENNPLLDRLTAFAKAQGAPVVAICAKM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S++++ D+ FL LG E LN LIR+++SLL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELSEMDDADRLEFLKELGQSEPGLNRLIRSAYSLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI++ DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAFDDFIAFKGEQGAKDAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|416954634|ref|ZP_11935727.1| GTP-binding protein YchF [Burkholderia sp. TJI49]
gi|325522824|gb|EGD01297.1| GTP-binding protein YchF [Burkholderia sp. TJI49]
Length = 364
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 287/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ +++L +L+++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAVKLAAVLEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMAEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|107024126|ref|YP_622453.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cenocepacia AU 1054]
gi|116688548|ref|YP_834171.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cenocepacia HI2424]
gi|170731849|ref|YP_001763796.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cenocepacia MC0-3]
gi|254246452|ref|ZP_04939773.1| hypothetical protein BCPG_01198 [Burkholderia cenocepacia PC184]
gi|105894315|gb|ABF77480.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116646637|gb|ABK07278.1| GTP-binding protein YchF [Burkholderia cenocepacia HI2424]
gi|124871228|gb|EAY62944.1| hypothetical protein BCPG_01198 [Burkholderia cenocepacia PC184]
gi|169815091|gb|ACA89674.1| GTP-binding protein YchF [Burkholderia cenocepacia MC0-3]
Length = 364
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L+++ L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTIEKALTRYSKAAKSGNDKEAAKLVAVLEKVRAQLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E IK L+T KP ++VANVK++GF+NN L+ ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALIKPFCLITAKPAMYVANVKDDGFENNPHLEAVRKYAESENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVTYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|319764314|ref|YP_004128251.1| GTP-binding protein YchF [Alicycliphilus denitrificans BC]
gi|317118875|gb|ADV01364.1| GTP-binding protein YchF [Alicycliphilus denitrificans BC]
Length = 364
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/364 (56%), Positives = 280/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERTVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL + L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVSLLTPLQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ ++ E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA QN P++ ICAK
Sbjct: 181 SVPVSKEDAPLLKQFCLITAKPAMFVGNVAEDGFENNPLLDKLKEYAAAQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEMAEMSDEDRDMFLQEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ YKGEQG K+AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFVQYKGEQGAKDAGKMRAEGKEYVVRDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|239817596|ref|YP_002946506.1| GTP-dependent nucleic acid-binding protein EngD [Variovorax
paradoxus S110]
gi|239804173|gb|ACS21240.1| GTP-binding protein YchF [Variovorax paradoxus S110]
Length = 363
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 280/362 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L+ IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ ++V+RCF D+ + H++G+++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATVNVVRCFDDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ + +L+ LL+R LN++ P+R
Sbjct: 121 PISDIEVIQTELCLADLATVEKALHRHTKVARSGDKDAQKLVGLLERCQAALNENTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ EE +K L+T KP +FV NV E+GF+NN LD+L+ YA Q P++ ICAK+
Sbjct: 181 LEFTKEEQPLVKSFTLITAKPAMFVGNVAEDGFENNPYLDRLREYAAKQGAPVVAICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++++ DKK FL +G +E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELAEMDDEDKKMFLAEIGQEEPGLNRLIRAAYKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IH D ++G+IRA TIS++D++ YKGEQG K+AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHGDFEKGYIRAQTISFEDYIAYKGEQGAKDAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|293607606|ref|ZP_06689940.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter
piechaudii ATCC 43553]
gi|292814039|gb|EFF73186.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter
piechaudii ATCC 43553]
Length = 363
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + K ++ S ++ +L++ I LN++ PIR
Sbjct: 121 PIADIEVIETELALADLQTAEKALLRHQKTARSGDKESQRIVAVLEKCIAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE + I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLTPEEHVDIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|161526040|ref|YP_001581052.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
multivorans ATCC 17616]
gi|189349244|ref|YP_001944872.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
multivorans ATCC 17616]
gi|221201738|ref|ZP_03574776.1| GTP-binding protein YchF [Burkholderia multivorans CGD2M]
gi|221207187|ref|ZP_03580197.1| GTP-binding protein YchF [Burkholderia multivorans CGD2]
gi|421473475|ref|ZP_15921582.1| GTP-binding protein YchF [Burkholderia multivorans ATCC BAA-247]
gi|421476345|ref|ZP_15924233.1| GTP-binding protein YchF [Burkholderia multivorans CF2]
gi|160343469|gb|ABX16555.1| GTP-binding protein YchF [Burkholderia multivorans ATCC 17616]
gi|189333266|dbj|BAG42336.1| probable translation factor [Burkholderia multivorans ATCC 17616]
gi|221172775|gb|EEE05212.1| GTP-binding protein YchF [Burkholderia multivorans CGD2]
gi|221178554|gb|EEE10963.1| GTP-binding protein YchF [Burkholderia multivorans CGD2M]
gi|400220859|gb|EJO51363.1| GTP-binding protein YchF [Burkholderia multivorans ATCC BAA-247]
gi|400228421|gb|EJO58355.1| GTP-binding protein YchF [Burkholderia multivorans CF2]
Length = 364
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L ++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|91785329|ref|YP_560535.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
xenovorans LB400]
gi|91689283|gb|ABE32483.1| Putative GTP-dependent nucleic acid-binding protein, EngD/YchF
[Burkholderia xenovorans LB400]
Length = 364
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +I+ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAAKSGNDKEAIKNAAVLEKVRAQLDQARPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKENGF+NN LD + +A +N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKENGFENNPHLDAVTKFAATENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTIAFNDFITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|330826387|ref|YP_004389690.1| GTP-binding protein YchF [Alicycliphilus denitrificans K601]
gi|329311759|gb|AEB86174.1| GTP-binding protein YchF [Alicycliphilus denitrificans K601]
Length = 364
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/364 (56%), Positives = 278/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G ++
Sbjct: 61 ERTVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL + L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVSLLTPLQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA QN P++ ICAK
Sbjct: 181 SVPVGKEDAPLLKQFCLITAKPAMFVGNVAEDGFENNPLLDKLKDYAAAQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEMAEMGDEDRDMFLQEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ YKGEQG K+AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIQYKGEQGAKDAGKMRAEGKEYVVRDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|171318021|ref|ZP_02907193.1| GTP-binding protein YchF [Burkholderia ambifaria MEX-5]
gi|171096807|gb|EDT41684.1| GTP-binding protein YchF [Burkholderia ambifaria MEX-5]
Length = 364
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + +K N+ + +L +L+++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLATVEKALTRYSKAAKSGNDKEAGKLAAVLEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLDLSDDEQALLKPFCLITAKPAMYVANVKDDGFENNAHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AG++R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVSYKGEQGAKEAGRMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|221213314|ref|ZP_03586289.1| GTP-binding protein YchF [Burkholderia multivorans CGD1]
gi|221166766|gb|EED99237.1| GTP-binding protein YchF [Burkholderia multivorans CGD1]
Length = 364
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L ++ +L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKVRAHLDEGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|385207932|ref|ZP_10034800.1| GTP-binding protein YchF [Burkholderia sp. Ch1-1]
gi|385180270|gb|EIF29546.1| GTP-binding protein YchF [Burkholderia sp. Ch1-1]
Length = 364
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +I+ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAAKSGNDKEAIKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKENGF+NN LD + +A +N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKENGFENNPHLDAVTKFAATENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTIAFNDFITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|423014085|ref|ZP_17004806.1| GTP-binding protein YchF [Achromobacter xylosoxidans AXX-A]
gi|338783016|gb|EGP47385.1| GTP-binding protein YchF [Achromobacter xylosoxidans AXX-A]
Length = 363
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + K ++ S L+ +L++ + LN++ PIR
Sbjct: 121 PIADIEVIETELALADLQTAEKALQRHQKTARSGDKESQRLVAVLEKCVAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLTTEEKADIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+D++ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDYIACKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254253365|ref|ZP_04946683.1| hypothetical protein BDAG_02626 [Burkholderia dolosa AUO158]
gi|124895974|gb|EAY69854.1| hypothetical protein BDAG_02626 [Burkholderia dolosa AUO158]
Length = 364
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L + +L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKARAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMAEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|375107437|ref|ZP_09753698.1| GTP-binding protein YchF [Burkholderiales bacterium JOSHI_001]
gi|374668168|gb|EHR72953.1| GTP-binding protein YchF [Burkholderiales bacterium JOSHI_001]
Length = 364
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++E+PD RL L+ IV+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLDALSAIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL +EK + + K N+ + L+K+L++ L+++ P+R
Sbjct: 121 PIADIEVIQTELCLADLGTVEKSLHRYVKAARSGNDKEAAALVKVLEKCQAALDQAQPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++ + EE + +K + L+T KP +FV NV E GF+NN L++LK +A QN P++ ICAK
Sbjct: 181 SIAFSKEEQVILKPMCLITAKPAMFVGNVSETGFENNAFLERLKDFAAQQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E E++D+ + D+ FL +G E LN LIRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEAELADMGDEDRSLFLAEMGQDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ +KGEQG K+AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFVQFKGEQGAKDAGKMRAEGKEYVVRDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|351729050|ref|ZP_08946741.1| GTP-binding protein YchF [Acidovorax radicis N35]
Length = 364
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 280/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLQQLAEIISP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+D+ +EK +++ K N+ + +L+ LL RI LN+ P R
Sbjct: 121 PISDIEVIQTELCLADMGTVEKALNRYTKAAKSGNDKDAAKLVALLTRIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EE +K L L+T KP +FV NV E+GF+NN LD+LK YA +QN P++ ICAK
Sbjct: 181 SVEITKEEQPLLKSLCLITAKPAMFVGNVSEDGFENNPFLDRLKEYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL +G E L LIR +F LL L+TYFT G KE+RAWTI G
Sbjct: 241 MEAEMAEMSDEDRDMFLAEMGQTEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++DF+ KGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDFIALKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|134294613|ref|YP_001118348.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
vietnamiensis G4]
gi|387901196|ref|YP_006331535.1| GTP-binding and nucleic acid-binding protein YchF [Burkholderia sp.
KJ006]
gi|134137770|gb|ABO53513.1| GTP-binding protein YchF [Burkholderia vietnamiensis G4]
gi|387576088|gb|AFJ84804.1| GTP-binding and nucleic acid-binding protein YchF [Burkholderia sp.
KJ006]
Length = 364
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ +++L +L+++ L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAVKLAAVLEKVRAQLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVK++GF NN L+ ++ YA ++N P++ +CA
Sbjct: 181 SLDLSDDEQALLKPFCLITAKPAMYVANVKDDGFDNNPHLEAVRKYAESENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TIS+ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTISFDDFVAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|332530292|ref|ZP_08406238.1| GTP-binding protein YchF [Hylemonella gracilis ATCC 19624]
gi|332040278|gb|EGI76658.1| GTP-binding protein YchF [Hylemonella gracilis ATCC 19624]
Length = 363
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 281/362 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L IV+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKQLAEIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ +++V+RCF DD + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDAIVNVVRCFSDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DL +EK + + K ++ SI+L+ +L++ L++ P+R
Sbjct: 121 PIADIEVIQTELCLADLGAVEKALHRVTKTARSGDKESIKLVAILEKCQAALDQGKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EEL +K +T KP +FV NV E+GF+NN LD+LK YA QN P++ ICAK+
Sbjct: 181 VEFSKEELPLLKQFFFITAKPAMFVGNVSEDGFENNPYLDRLKEYAATQNAPVVAICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S++++ D+ FL LG +E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELSEMDDADRLEFLQELGQEEPGLNRLIRAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI+++DF+ +KGEQG K+ GK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAFEDFIAHKGEQGAKDVGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|421486684|ref|ZP_15934220.1| GTP-binding protein YchF [Achromobacter piechaudii HLE]
gi|400194989|gb|EJO27989.1| GTP-binding protein YchF [Achromobacter piechaudii HLE]
Length = 363
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A ++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+D+ EK + + K ++ S ++ +L++ I LN++ PIR
Sbjct: 121 PIADIEVIETELALADMQTAEKALQRHQKTARSGDKESQRIVAVLEKCIAQLNEAKPIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE I L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LDLTTEEKADIAQLCFITAKRAMYVGNVADDGFTNNPLLDRLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL++ D++ FL ++G++E LN LIRA+F LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIVDLDDADRQAFLSDMGMEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|170696264|ref|ZP_02887396.1| GTP-binding protein YchF [Burkholderia graminis C4D1M]
gi|170138824|gb|EDT07020.1| GTP-binding protein YchF [Burkholderia graminis C4D1M]
Length = 364
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +I+ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAAKSGNDKEAIKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKE+GF+NN LD + +A ++N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKEDGFQNNPHLDAVAKFAASENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTISFNDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|206558793|ref|YP_002229553.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cenocepacia J2315]
gi|421863961|ref|ZP_16295649.1| GTP-binding and nucleic acid-binding protein YchF [Burkholderia
cenocepacia H111]
gi|444356335|ref|ZP_21158014.1| GTP-binding protein YchF [Burkholderia cenocepacia BC7]
gi|444373702|ref|ZP_21173045.1| GTP-binding protein YchF [Burkholderia cenocepacia K56-2Valvano]
gi|198034830|emb|CAR50698.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
gi|358075914|emb|CCE46527.1| GTP-binding and nucleic acid-binding protein YchF [Burkholderia
cenocepacia H111]
gi|443591271|gb|ELT60180.1| GTP-binding protein YchF [Burkholderia cenocepacia K56-2Valvano]
gi|443607382|gb|ELT75089.1| GTP-binding protein YchF [Burkholderia cenocepacia BC7]
Length = 364
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L+++ L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTIEKALTRYSKAAKSGNDKEAAKLVAVLEKVRAQLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E IK L+T KP ++VANVK++GF+NN L+ ++ YA ++N P++ +CA
Sbjct: 181 GLALSDDEQALIKPFCLITAKPAMYVANVKDDGFENNPHLEAVRKYAESENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVTYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|33599894|ref|NP_887454.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella
bronchiseptica RB50]
gi|33567491|emb|CAE31404.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 363
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRETN +I+V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIINVVRCFEDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQAFLSDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|402567746|ref|YP_006617091.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cepacia GG4]
gi|402248943|gb|AFQ49397.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
cepacia GG4]
Length = 364
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIISP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L+++ L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAAKLVAVLEKVRAQLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL+++E IK L+T KP ++VANVK++GF+NN L+ ++ YA +N P++ +CA
Sbjct: 181 SLSLSDDEQAVIKPFCLITAKPAMYVANVKDDGFENNPHLEAVRKYAEAENSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDFVTYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|167571389|ref|ZP_02364263.1| translation-associated GTPase [Burkholderia oklahomensis C6786]
Length = 364
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L +I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ + +L+ +L++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLATVEKALARYSKAAKSGNDKEAAKLVAVLEKARAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E IK L+T KP ++VANVKE+GF NN LD ++ YA + P++ +CA
Sbjct: 181 GLDLSDDEQALIKPFCLITAKPAMYVANVKEDGFANNPHLDAVRQYAEAEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|30249777|ref|NP_841847.1| GTP-dependent nucleic acid-binding protein EngD [Nitrosomonas
europaea ATCC 19718]
gi|30180814|emb|CAD85734.1| GTP1/OBG family:Conserved hypothetical protein 92 [Nitrosomonas
europaea ATCC 19718]
Length = 363
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 283/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELSRIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D + H++G+++
Sbjct: 61 QRVQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA ++K I ++ KK ++ +I+L+ +L+++I +LN+ P R
Sbjct: 121 PLADIEVILTELALADLATVDKAIARDGKKAKSGDKEAIKLVTVLEKLIPHLNQGQPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+NEE I+ L LLTIKP ++V NV E+GF+NN LD+L+ YA +N P++ +CAK+
Sbjct: 181 FPLSNEEKEIIRPLCLLTIKPAMYVGNVLEDGFENNPYLDRLREYAAKENAPVVALCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL+ DKK FL +LGL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLDEADKKEFLADLGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGNT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA T+SY DF+ GE G K GK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFEKGFIRAQTVSYADFIACGGEAGAKEKGKMRVEGKDYIVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410418670|ref|YP_006899119.1| hypothetical protein BN115_0874 [Bordetella bronchiseptica MO149]
gi|412339836|ref|YP_006968591.1| hypothetical protein BN112_2537 [Bordetella bronchiseptica 253]
gi|427813137|ref|ZP_18980201.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427821053|ref|ZP_18988116.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427823704|ref|ZP_18990766.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|408445965|emb|CCJ57630.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408769670|emb|CCJ54454.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410564137|emb|CCN21678.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410572053|emb|CCN20308.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410588969|emb|CCN04032.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 363
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRETN +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFEDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQAFLSDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|383760021|ref|YP_005439007.1| GTP-binding protein YchF [Rubrivivax gelatinosus IL144]
gi|381380691|dbj|BAL97508.1| GTP-binding protein YchF [Rubrivivax gelatinosus IL144]
Length = 364
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++E+PD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLVKLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF D+ + H++G ++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFDDENVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIE-LLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL +EK + + +K+ + + L+ +L++ LN++ P+R
Sbjct: 121 PIADIEVIQTELCLADLGTVEKSLVRYSKQARAGGDKEAQRLVDVLQKCQAALNEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EEL+ +K L L+T KP +FV NV E+GF+NN L++L+ YA Q P++ ICAK
Sbjct: 181 SIDFSKEELVVLKPLCLITAKPAMFVGNVAEDGFENNAYLERLREYAAAQKAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E +++D+++ DK FL +G E LN LIRA+F+LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEADLADMSDEDKTMFLAEMGQDEPGLNRLIRAAFTLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ + GEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFVAFGGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|187925479|ref|YP_001897121.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
phytofirmans PsJN]
gi|187716673|gb|ACD17897.1| GTP-binding protein YchF [Burkholderia phytofirmans PsJN]
Length = 364
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +I+ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAAKSGNDKEAIKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKE+GF+NN LD + +A +N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKEDGFENNPHLDAVAKHAAAENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TI+Y D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTIAYNDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|33594042|ref|NP_881686.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella
pertussis Tohama I]
gi|384205345|ref|YP_005591084.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella
pertussis CS]
gi|33564116|emb|CAE43388.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383459|gb|AEE68306.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella
pertussis CS]
Length = 363
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRETN +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFEDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQTLIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQAFLSDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407714859|ref|YP_006835424.1| GTP-binding protein YchF [Burkholderia phenoliruptrix BR3459a]
gi|407237043|gb|AFT87242.1| GTP-binding protein YchF [Burkholderia phenoliruptrix BR3459a]
Length = 364
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +++ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAARSGNDKEAVKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKE+GF+NN LD + +A ++N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKEDGFENNPHLDAVMKFAASENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTISFDDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|167564238|ref|ZP_02357154.1| translation-associated GTPase [Burkholderia oklahomensis EO147]
Length = 364
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L +I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ + +L+ +L++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLATVEKALARYSKAAKSGNDKEAAKLVAVLEKARAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E IK L+T KP ++VANVKE+GF NN LD ++ YA + P++ +CA
Sbjct: 181 GLDLSDDEKALIKPFCLITAKPAMYVANVKEDGFANNPHLDAVRQYAEAEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|410471587|ref|YP_006894868.1| hypothetical protein BN117_0851 [Bordetella parapertussis Bpp5]
gi|408441697|emb|CCJ48184.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 363
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRETN +++V+RCF+D + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFEDPNVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQTFLSDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|187930207|ref|YP_001900694.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
pickettii 12J]
gi|187727097|gb|ACD28262.1| GTP-binding protein YchF [Ralstonia pickettii 12J]
Length = 364
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + K N+ + +L+ +L++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLATVEKALQRYTKAAKSGNDKEAAKLVAVLEKAQKVLDEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L ++E +IK L L+T KP ++VANV+E+GF+NN LD ++ YA N P++ +CA
Sbjct: 181 GLNLTDDEWATIKPLCLITAKPTMYVANVREDGFENNPHLDAVRNYAAQTNSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKAEFLADIGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TISY DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTISYDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|307731108|ref|YP_003908332.1| GTP-binding protein YchF [Burkholderia sp. CCGE1003]
gi|323527466|ref|YP_004229619.1| GTP-binding protein YchF [Burkholderia sp. CCGE1001]
gi|307585643|gb|ADN59041.1| GTP-binding protein YchF [Burkholderia sp. CCGE1003]
gi|323384468|gb|ADX56559.1| GTP-binding protein YchF [Burkholderia sp. CCGE1001]
Length = 364
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +++ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYSKAAKSGNDKEAVKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKE+GF+NN LD + +A ++N P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKEDGFENNPHLDAVMKFAASENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDEADMEVFLADMGMEEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTISFDDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|163858314|ref|YP_001632612.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella petrii
DSM 12804]
gi|163262042|emb|CAP44344.1| putative GTP binding protein [Bordetella petrii]
Length = 363
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL+ L IV
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVGP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKEAQRLVAALEKCIAALNQAKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE IK L +T KP ++V NV ++GF NN LL++L +A +N P++ ICA +
Sbjct: 181 VDLSDEEAALIKQLCFITAKPAMYVGNVSDDGFTNNPLLERLTEFAAARNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL + D++ FL ++G+ E LN LIRA+F LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPDEDRQAFLADMGMDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TIS+ DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISFDDFIACKGEQGAKEAGKMRAEGKEYVVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332524126|ref|ZP_08400356.1| GTP-binding protein YchF [Rubrivivax benzoatilyticus JA2]
gi|332107465|gb|EGJ08689.1| GTP-binding protein YchF [Rubrivivax benzoatilyticus JA2]
Length = 364
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++E+PD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLVKLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FL+HIRET+ +++V+RCF D+ + H++G ++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFDDENVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIE-LLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL +EK + + +K+ + + L+ +L++ LN++ P+R
Sbjct: 121 PIADIEVIQTELCLADLGTVEKSLVRYSKQARAGGDKEAQRLVDVLQKCQAALNEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EEL+ +K L L+T KP +FV NV E+GF+NN L++L+ YA Q P++ ICAK
Sbjct: 181 SIDFSKEELVVLKPLCLITAKPAMFVGNVAEDGFENNAYLERLREYAAAQKAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E +++D+++ D+ FL +G E LN LIRA+F+LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEADLADMSDEDRTLFLAEMGQDEPGLNRLIRAAFTLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ + GEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFVAFGGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|296137294|ref|YP_003644536.1| GTP-binding protein YchF [Thiomonas intermedia K12]
gi|295797416|gb|ADG32206.1| GTP-binding protein YchF [Thiomonas intermedia K12]
Length = 363
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I AENYPFCTIEPN GI+E+PD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSAIPAENYPFCTIEPNTGIVELPDPRLDQLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +I+V+RCF+D + H++G ++
Sbjct: 61 QRVLPAVVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIINVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D VIQTEL L+DL EK + + NK+ ++ + + LL+RII LN++ P+R
Sbjct: 121 PISDIAVIQTELCLADLGTAEKSLHRMNKQGRSGDKDAKRVADLLERIIPALNEARPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL I L L+T KP +FV NV E+GF NN LD+L+ YA +N P++ ICAKL
Sbjct: 181 LGLSAEELALIAPLCLITAKPAMFVGNVMEDGFDNNPHLDRLREYAAQENAPVVAICAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L+ +K+ FL +LG +E LN LIR+++ LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELAGLDAEEKQAFLADLGQEEPGLNRLIRSAYKLLGLQTYFTAGVKEVRAWTVHVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD +RGFIRA TI++ DF+ Y GEQG K+AGK+R+EGK+Y+V+DGD+L+FL
Sbjct: 301 APQAAAVIHTDFERGFIRAQTIAFDDFIRYGGEQGAKDAGKMRAEGKEYIVKDGDVLHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398812381|ref|ZP_10571142.1| GTP-binding protein YchF [Variovorax sp. CF313]
gi|398078095|gb|EJL69025.1| GTP-binding protein YchF [Variovorax sp. CF313]
Length = 363
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/362 (55%), Positives = 280/362 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L+ IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ ++V+RCF D+ + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATVNVVRCFDDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ + +L+ LL+R LN++ P+R
Sbjct: 121 PISDIEVIQTELCLADLATVEKALHRHTKVARSGDKDAQKLVGLLERCQAALNENTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ EE +K L+T KP +FV NV E+GF+NN LD+L+ YA Q P++ ICAK+
Sbjct: 181 LEFTKEEQPLVKSFTLITAKPAMFVGNVAEDGFENNPYLDRLREYAAKQGAPVVAICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +++++++ DKK FL +G +E LN LIRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EADLAEMDDEDKKMFLAEIGQEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IH D ++G+IRA TI+++D++ +KGEQG K+AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHGDFEKGYIRAQTIAFEDYIAFKGEQGAKDAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|33595509|ref|NP_883152.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella
parapertussis 12822]
gi|33565587|emb|CAE40230.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 363
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTGAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRETN +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFEDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQAFLSDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 ASQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|124268350|ref|YP_001022354.1| GTP-binding protein [Methylibium petroleiphilum PM1]
gi|124261125|gb|ABM96119.1| putative GTP-binding protein [Methylibium petroleiphilum PM1]
Length = 364
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++E+PD RL+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLQALAAIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF D+ + H++G+++
Sbjct: 61 EKLVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFDDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL+ +EK + + K N+ + +L+ +L++ LN++ P+R
Sbjct: 121 PIADIEVIQTELCLADLSTVEKTLQRSIKAAKSGNDKEAAKLVDVLQKCQTALNEARPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++ + EE+ +K L L+T KP +FV NV E GF++N LD+L+ YA +Q P++ ICAK
Sbjct: 181 SIAFSKEEMAILKPLCLITAKPAMFVGNVDEGGFQDNPYLDKLRAYAESQRAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E E++D+++ D+ FL +G +E LN LIRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEAELADMSDEDRLMFLQEMGQEEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ DF+ +KGEQG K AGK+R+EGK Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFNDFIAFKGEQGAKEAGKMRAEGKDYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|383315923|ref|YP_005376765.1| GTP-binding protein YchF [Frateuria aurantia DSM 6220]
gi|379043027|gb|AFC85083.1| GTP-binding protein YchF [Frateuria aurantia DSM 6220]
Length = 363
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++CG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+G++EVPD+RL L I+
Sbjct: 1 MGIQCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGVVEVPDERLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF+DD I H++G+++
Sbjct: 61 QKIVPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFEDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D VI TEL L+DLA +EK +E KK ++ + LL +L +++ +LN+ P R
Sbjct: 121 PIDDIIVIGTELALADLATVEKAQAREAKKAKGGDKDAKALLPVLDKLLPHLNEGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLTIKP ++VANV E+GF NN LLD+++ +A + P++++CA +
Sbjct: 181 APLDAEEKALLKPLTLLTIKPAMYVANVAEDGFDNNPLLDKVRAHAEAEGAPVVVVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +LG E LN L RA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELDDADKAEFLASLGQSEPGLNRLARAAFQLLGLQTYFTAGVKEVRAWTIKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ Y+GE G K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFNDFIQYQGEAGAKEAGKVRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410695173|ref|YP_003625795.1| GTP-dependent nucleic acid-binding protein engD [Thiomonas sp. 3As]
gi|294341598|emb|CAZ90015.1| GTP-dependent nucleic acid-binding protein engD [Thiomonas sp. 3As]
Length = 363
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I AENYPFCTIEPN GI+E+PD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSAIPAENYPFCTIEPNTGIVELPDPRLDQLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +I+V+RCF+D + H++G ++
Sbjct: 61 QRVLPAVVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIINVVRCFEDPNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D VIQTEL L+DL EK + + NK+ ++ + + LL+RII LN++ P+R
Sbjct: 121 PISDIAVIQTELCLADLGTAEKSLHRMNKQGRSGDKDAKRVADLLERIIPALNEARPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL I L L+T KP +FV NV E+GF NN LD+L+ YA +N P++ ICAKL
Sbjct: 181 LGLSAEELALIAPLCLITAKPAMFVGNVMEDGFDNNPHLDRLREYAAQENAPVVAICAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L+ +K+ FL +LG +E LN LIR+++ LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELAGLDAEEKQAFLADLGQEEPGLNRLIRSAYKLLGLQTYFTAGVKEVRAWTVHVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD +RGFIRA TI++ DF+ Y GEQG K+AGK+R+EGK Y+V+DGD+L+FL
Sbjct: 301 APQAAAVIHTDFERGFIRAQTIAFDDFIRYGGEQGAKDAGKMRAEGKDYIVKDGDVLHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|160896981|ref|YP_001562563.1| GTP-binding protein YchF [Delftia acidovorans SPH-1]
gi|333916590|ref|YP_004490322.1| GTP-binding protein YchF [Delftia sp. Cs1-4]
gi|160362565|gb|ABX34178.1| GTP-binding protein YchF [Delftia acidovorans SPH-1]
gi|333746790|gb|AEF91967.1| GTP-binding protein YchF [Delftia sp. Cs1-4]
Length = 364
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL+ L +I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQKLADIITP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++ +++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +++ LL I L++ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKVVALLTPIQAALDQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ ++ E+ +K L+T KP +FV NV E+GF+NN LLD LK YA Q P++ ICAK
Sbjct: 181 TVPVSKEDAPLLKQFCLITAKPAMFVGNVSEDGFENNPLLDSLKAYAEAQGAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++++ D+ FL LGL+E LN LIRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEMAEMSDEDRDMFLQELGLEEPGLNRLIRAGFGLLGLQTYFTAGVKEVRAWTIKVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDFIAFKGEQGAKDAGKMRAEGKEYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|17547617|ref|NP_521019.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
solanacearum GMI1000]
gi|17429921|emb|CAD16605.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000]
Length = 364
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD+RL L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLSALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + +K N+ + +L+ +L++ L+++ +R
Sbjct: 121 PIADIEVINTELALADLATVEKALARYSKAAKSGNDKEAAKLVAVLEKARSVLDEAKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL++EE +K L L+T KP ++VANVK++GF+NN LD ++ YA P++ +CA
Sbjct: 181 TLSLSDEEWALLKPLCLITAKPTMYVANVKDDGFENNPHLDAVRAYAAQTGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKTEFLADMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAYDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|395005592|ref|ZP_10389467.1| GTP-binding protein YchF [Acidovorax sp. CF316]
gi|394316519|gb|EJE53243.1| GTP-binding protein YchF [Acidovorax sp. CF316]
Length = 364
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 279/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAQLASIITP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ +++V+RCF+DD + H++G ++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DL ++K +++ +K N+ + +L+ LL RI LN+ P R
Sbjct: 121 PISDIEVIQTELCLADLGTVDKALNRYSKAAKSGNDKDAAKLVALLTRIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + EE +K L L+T KP +FV NV E+GF+NN LD+LK YA +QN P++ ICAK
Sbjct: 181 SVEITKEEQPLLKSLCLITAKPAMFVGNVSEDGFENNPFLDRLKEYAASQNAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL +G E L LIR +F LL L+TYFT G KE+RAWTI G
Sbjct: 241 MEAEMAEMGDEDRDMFLAEMGQSEPGLARLIRGAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI++ D++ KGEQG K+AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFDDYIALKGEQGAKDAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|78065087|ref|YP_367856.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia sp.
383]
gi|77965832|gb|ABB07212.1| GTP-binding protein, HSR1-related protein [Burkholderia sp. 383]
Length = 364
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL +EK + + +K N+ + +L+ +L+++ L++ +R
Sbjct: 121 PIDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAGKLVAVLEKVRAQLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA ++N P++ +CA
Sbjct: 181 GLTLSDDEEALLKPFCLITAKPTMYVANVKDDGFENNPHLDAVRKYAESENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G++E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMQEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI++ D++ +KGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFDDYVTFKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|167841310|ref|ZP_02467994.1| translation-associated GTPase [Burkholderia thailandensis MSMB43]
gi|424907636|ref|ZP_18331112.1| translation-associated GTPase [Burkholderia thailandensis MSMB43]
gi|390927002|gb|EIP84417.1| translation-associated GTPase [Burkholderia thailandensis MSMB43]
Length = 364
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L+ I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALSEIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + +L+ +L++ L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLEKARARLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLSDDEQALLKPFCLITAKPAMYVANVKEDGFENNPHLDAVRKYAESEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFISYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|302877830|ref|YP_003846394.1| GTP-binding protein YchF [Gallionella capsiferriformans ES-2]
gi|302580619|gb|ADL54630.1| GTP-binding protein YchF [Gallionella capsiferriformans ES-2]
Length = 363
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 286/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD R+ L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRMDELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF+D+ + H++G ++
Sbjct: 61 QRMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFEDENVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+A++E+ + ++ KK ++ +I+++ +L++++ +LN+ P+R
Sbjct: 121 PLSDIEVILTELALADMAVVERTLHRDGKKAKSGDKDAIKMVAVLEKLLPHLNEGKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +K L +LTIKP ++V NV E+GF+NN LD+L+ YA + P++++CAK+
Sbjct: 181 FGLSDDEKEIVKPLCMLTIKPAMYVGNVMEDGFENNPHLDRLREYAAKEGAPVVVLCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+SDL++ D+ FL +LGL E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELSDLDDADRLEFLADLGLDEPGLNKLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ GE G K GK+R EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFSDFIACGGEAGAKEKGKMRVEGKEYVVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|226939278|ref|YP_002794349.1| GTP-dependent nucleic acid-binding protein EngD [Laribacter
hongkongensis HLHK9]
gi|226714202|gb|ACO73340.1| YchF [Laribacter hongkongensis HLHK9]
Length = 363
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L+ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLDELSKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF+D I H++G+++
Sbjct: 61 QRVQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFEDPNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL+ +EK +++E KK ++ + L+ +L++++ +L++ P R
Sbjct: 121 PIADIETIGTELALADLSAVEKALNREGKKAKAGDKDARALVAVLEKLVPHLDQGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +K L LLTIKP ++VANV E+GF +N LD+LK A + P++ +CA +
Sbjct: 181 LELSPEELAIVKPLCLLTIKPAMYVANVAEDGFADNAHLDRLKALADAEGAPVVALCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIADLDDADKTDFLAEMGLEEPGLNRLIRAGYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TIS+ DF+ Y GE K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISFADFIQYGGEAKAKEAGKMRAEGKEYVVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|83720307|ref|YP_443427.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
thailandensis E264]
gi|167620566|ref|ZP_02389197.1| translation-associated GTPase [Burkholderia thailandensis Bt4]
gi|257137794|ref|ZP_05586056.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
thailandensis E264]
gi|83654132|gb|ABC38195.1| GTP-binding protein YchF [Burkholderia thailandensis E264]
Length = 364
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L +I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + +L+ +L++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLEKTRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLSDDEKALLKPFCLITAKPAMYVANVKEDGFENNPHLDAVRKYAESEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|121606252|ref|YP_983581.1| GTP-dependent nucleic acid-binding protein EngD [Polaromonas
naphthalenivorans CJ2]
gi|120595221|gb|ABM38660.1| GTP-binding protein YchF [Polaromonas naphthalenivorans CJ2]
Length = 363
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 283/362 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ AI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ +++V+RCF+DD + H++G+++
Sbjct: 61 QKVQRAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDAIVNVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ S +L+ +L++ LN++ P+R
Sbjct: 121 PIDDIEVIQTELCLADLAAVEKALHRVGKLARSGDKDSAKLVAILEKCQAALNEAKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + +EL ++ L+T KP +FVANV E+GF+NN LD+L YA +QN P++ I AKL
Sbjct: 181 LDFSKDELPLLQQFFLITAKPAMFVANVAEDGFENNPFLDRLTAYAESQNAPVVAISAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++++ D++ FL+ LG E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEMAEMSDEDRQMFLEELGQTEPGLNRLIRAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI++ DF+ +KGEQG K+AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAFDDFIAFKGEQGAKDAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|167582475|ref|ZP_02375349.1| translation-associated GTPase [Burkholderia thailandensis TXDOH]
Length = 364
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L +I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + +L+ +L++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLEKTRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLSDDEKALLKPFCLITAKPAMYVANVKEDGFENNPHLDAVRKYAASEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|238026098|ref|YP_002910329.1| GTP-binding protein YchF [Burkholderia glumae BGR1]
gi|237875292|gb|ACR27625.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
glumae BGR1]
Length = 364
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK ++ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKAISAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G ++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + +K N+ +++L L+++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLATVEKALARYSKAAKSGNDKEAVKLAAALEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVK++GF+NN LD ++ YA + P++ +CA
Sbjct: 181 GLELSDDERAILKPFCLITAKPAMYVANVKDDGFENNPHLDAVRRYAEAEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI Y D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIGYDDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|171462965|ref|YP_001797078.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192503|gb|ACB43464.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 364
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAALAEIVKS 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H++G+I+
Sbjct: 61 ERILPTAVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDPNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D VI TEL LSDLA +EK +++ +K N+ + L+ +L ++ +L+ ++P+R
Sbjct: 121 PIADIGVIDTELALSDLATVEKTLNRSSKAAKSGNDKEAAALVAVLTKVQAHLDSALPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L+++E + IK L L+T KP ++VANVKE GF NN L+ +K +A + P+I +CA
Sbjct: 181 SLNLSDDEKLLIKPLCLITAKPAMYVANVKEGGFSNNSHLEAVKQHAAKERAPVIAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL DK FL +LG++E L+ +IRA ++LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLEEADKIEFLADLGMEEPGLDRVIRAGYALLGLQTYFTAGVKEVRAWTIHQGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TISY DF+ +KGE G K AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHADFERGFIRAQTISYDDFVQFKGEAGAKEAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|71909345|ref|YP_286932.1| GTP-dependent nucleic acid-binding protein EngD [Dechloromonas
aromatica RCB]
gi|71848966|gb|AAZ48462.1| Conserved hypothetical protein 92 [Dechloromonas aromatica RCB]
Length = 363
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPDKR+K L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDKRMKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ V+HV+RCF DD + H+SG ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFADDNVVHVSGGVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+A +EK +++ + ++ + L+ +L++ L+++ +R
Sbjct: 121 PLRDIEVIDTELALADMATVEKALNRYRRPASSGDKEAKILVAVLEKCFTQLDQAKAVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +K L+T KP+++VANV E+GF NN LLD ++ +A + ++ +CA +
Sbjct: 181 LDLSKEEWACLKPFCLITAKPVLYVANVAEDGFTNNPLLDAVRAHAAAEKAEVVSLCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ +K+ FL +LGL+E L+ LI A + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIADLDDEEKEMFLADLGLEEPGLDRLIHAGYKLLGLQTYFTAGVKEVRAWTIHQGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+++DF+ YKGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFEDFITYKGEAGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|56477780|ref|YP_159369.1| GTP-dependent nucleic acid-binding protein EngD [Aromatoleum
aromaticum EbN1]
gi|56313823|emb|CAI08468.1| predicted GTPase, probably involved in regulation of ribosome
function [Aromatoleum aromaticum EbN1]
Length = 363
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 280/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKSGIAAENYPFCTIEPNVGIVEVPDPRLDALSTIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ ++HV+RCF D+ + H+SG ++
Sbjct: 61 QKVQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADENVVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D+A ++K + + + ++ + L+ +L++ I L+++ P+R
Sbjct: 121 PIRDIEVIDTELALADMATVDKALARYKRPAAAGDKDAKVLVAVLEKCIAQLDQAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE S+K L+T KP+++VANVKE GF+NN LD + +A + ++ ICA +
Sbjct: 181 LDLAKEEWASLKPFCLITAKPVLYVANVKEGGFENNPHLDAVVAHAAAEKAEVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +LGL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELDDADKSEFLADLGLEEPGLNRLIRAGYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKDYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|291614808|ref|YP_003524965.1| GTP-binding protein YchF [Sideroxydans lithotrophicus ES-1]
gi|291584920|gb|ADE12578.1| GTP-binding protein YchF [Sideroxydans lithotrophicus ES-1]
Length = 363
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD R+ L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRMDELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D + H++G+++
Sbjct: 61 QRMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+DLA++E+ I ++ KK ++ + +L+ +L+R++ +LN+ P R
Sbjct: 121 PISDIEVILTELALADLAVVERTIQRDGKKAKSGDKDAQKLVAVLERLLPHLNEGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L +EE + IK L LLT+KP ++V NV E+GF+NN LD+L+ +A + P++ +CAK+
Sbjct: 181 FGLTDEEKLLIKPLCLLTVKPAMYVGNVLEDGFENNPHLDKLREHAAKEGAPVVALCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL++ DKK FL +LGL E LN LIR + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLDDADKKEFLADLGLDEPGLNRLIRTGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA TISY DF+ GE G K GK+R EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFEKGFIRAQTISYVDFIACGGEAGAKEKGKMRVEGKDYVVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|241664357|ref|YP_002982717.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
pickettii 12D]
gi|240866384|gb|ACS64045.1| GTP-binding protein YchF [Ralstonia pickettii 12D]
Length = 363
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 287/363 (79%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + K N+ + +L+ +L++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLATVEKALQRYTKAAKSGNDKEAAKLVAVLEKAQKVLDEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L ++E ++K L L+T KP ++VANV+E+GF+NN LD ++ YA N P++ +CA
Sbjct: 181 GLNLTDDEWATLKPLCLITAKPTMYVANVREDGFENNPHLDAVRNYAAQTNSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G++E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKAEFLADIGMEEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TISY+D++ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTISYEDYIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFN 362
LF+
Sbjct: 361 LFH 363
>gi|53717368|ref|YP_105289.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
mallei ATCC 23344]
gi|53720671|ref|YP_109657.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei K96243]
gi|67640240|ref|ZP_00439054.1| GTP-binding protein YchF [Burkholderia mallei GB8 horse 4]
gi|121598050|ref|YP_990263.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
mallei SAVP1]
gi|124382759|ref|YP_001024761.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
mallei NCTC 10229]
gi|126447580|ref|YP_001079100.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
mallei NCTC 10247]
gi|126452709|ref|YP_001067827.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1106a]
gi|167004156|ref|ZP_02269926.1| GTP-binding protein YchF [Burkholderia mallei PRL-20]
gi|167825973|ref|ZP_02457444.1| translation-associated GTPase [Burkholderia pseudomallei 9]
gi|167847459|ref|ZP_02472967.1| translation-associated GTPase [Burkholderia pseudomallei B7210]
gi|167904430|ref|ZP_02491635.1| translation-associated GTPase [Burkholderia pseudomallei NCTC
13177]
gi|217424726|ref|ZP_03456223.1| GTP-binding protein YchF [Burkholderia pseudomallei 576]
gi|226192991|ref|ZP_03788602.1| GTP-binding protein YchF [Burkholderia pseudomallei Pakistan 9]
gi|237813961|ref|YP_002898412.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei MSHR346]
gi|242316670|ref|ZP_04815686.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1106b]
gi|254175829|ref|ZP_04882488.1| GTP-binding protein YchF [Burkholderia mallei ATCC 10399]
gi|254198553|ref|ZP_04904974.1| GTP-binding protein YchF [Burkholderia pseudomallei S13]
gi|254203256|ref|ZP_04909618.1| GTP-binding protein YchF [Burkholderia mallei FMH]
gi|254208592|ref|ZP_04914941.1| GTP-binding protein YchF [Burkholderia mallei JHU]
gi|254355773|ref|ZP_04972052.1| GTP-binding protein YchF [Burkholderia mallei 2002721280]
gi|403520266|ref|YP_006654400.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei BPC006]
gi|418375679|ref|ZP_12965728.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 354a]
gi|418552284|ref|ZP_13117156.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 354e]
gi|52211085|emb|CAH37073.1| putative GTP-binding protein [Burkholderia pseudomallei K96243]
gi|52423338|gb|AAU46908.1| GTP-binding protein YchF [Burkholderia mallei ATCC 23344]
gi|121225848|gb|ABM49379.1| GTP-binding protein YchF [Burkholderia mallei SAVP1]
gi|124290779|gb|ABN00049.1| GTP-binding protein YchF [Burkholderia mallei NCTC 10229]
gi|126226351|gb|ABN89891.1| GTP-binding protein YchF [Burkholderia pseudomallei 1106a]
gi|126240434|gb|ABO03546.1| GTP-binding protein YchF [Burkholderia mallei NCTC 10247]
gi|147746301|gb|EDK53379.1| GTP-binding protein YchF [Burkholderia mallei FMH]
gi|147751279|gb|EDK58347.1| GTP-binding protein YchF [Burkholderia mallei JHU]
gi|148024744|gb|EDK82927.1| GTP-binding protein YchF [Burkholderia mallei 2002721280]
gi|160696872|gb|EDP86842.1| GTP-binding protein YchF [Burkholderia mallei ATCC 10399]
gi|169655293|gb|EDS87986.1| GTP-binding protein YchF [Burkholderia pseudomallei S13]
gi|217392182|gb|EEC32207.1| GTP-binding protein YchF [Burkholderia pseudomallei 576]
gi|225934961|gb|EEH30937.1| GTP-binding protein YchF [Burkholderia pseudomallei Pakistan 9]
gi|237502765|gb|ACQ95083.1| GTP-binding protein YchF [Burkholderia pseudomallei MSHR346]
gi|238520930|gb|EEP84386.1| GTP-binding protein YchF [Burkholderia mallei GB8 horse 4]
gi|242139909|gb|EES26311.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1106b]
gi|243060453|gb|EES42639.1| GTP-binding protein YchF [Burkholderia mallei PRL-20]
gi|385373363|gb|EIF78414.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 354e]
gi|385378117|gb|EIF82623.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 354a]
gi|403075908|gb|AFR17488.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei BPC006]
Length = 364
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALAEIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + +L+ +L + +L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKARAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLSDDERALLKPFCLITAKPAMYVANVKEDGFENNPHLDAVRRYAESEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|339484793|ref|YP_004696579.1| GTP-binding protein YchF [Nitrosomonas sp. Is79A3]
gi|338806938|gb|AEJ03180.1| GTP-binding protein YchF [Nitrosomonas sp. Is79A3]
Length = 363
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/363 (57%), Positives = 282/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PNIGI+EVPD RL+ L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIDPNIGIVEVPDPRLQKLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI AI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ +++++RCF DD + H++G+++
Sbjct: 61 QKIQSAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDGIVNMVRCFADDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK I +E+K N+ +I+L LL+ + +L++ P R
Sbjct: 121 PISDIEVIQTELALADLATVEKAIQRESKVAKSGNKDAIKLCALLETVQAHLDQGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ ++ L LLT KP I+VANV ++GF+NN LL +++ YA + P++ ICA L
Sbjct: 181 LDLDKEQKHLLQPLCLLTAKPAIYVANVDDHGFQNNPLLTRVEEYAAQEGAPVVAICAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + DKK FL +L L+E LN L+RA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELPDEDKKIFLADLNLEEPGLNRLVRAGYELLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ Y GEQG K AGK+R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIAYNGEQGAKEAGKMRLEGKEYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|76811417|ref|YP_334952.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1710b]
gi|126438532|ref|YP_001060574.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 668]
gi|134283112|ref|ZP_01769813.1| GTP-binding protein YchF [Burkholderia pseudomallei 305]
gi|167721383|ref|ZP_02404619.1| translation-associated GTPase [Burkholderia pseudomallei DM98]
gi|167740354|ref|ZP_02413128.1| translation-associated GTPase [Burkholderia pseudomallei 14]
gi|167817570|ref|ZP_02449250.1| translation-associated GTPase [Burkholderia pseudomallei 91]
gi|167896048|ref|ZP_02483450.1| translation-associated GTPase [Burkholderia pseudomallei 7894]
gi|167912693|ref|ZP_02499784.1| translation-associated GTPase [Burkholderia pseudomallei 112]
gi|167920660|ref|ZP_02507751.1| translation-associated GTPase [Burkholderia pseudomallei BCC215]
gi|254180506|ref|ZP_04887104.1| GTP-binding protein YchF [Burkholderia pseudomallei 1655]
gi|254190490|ref|ZP_04896998.1| GTP-binding protein YchF [Burkholderia pseudomallei Pasteur 52237]
gi|254260871|ref|ZP_04951925.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1710a]
gi|254300742|ref|ZP_04968187.1| GTP-binding protein YchF [Burkholderia pseudomallei 406e]
gi|386860358|ref|YP_006273307.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1026b]
gi|418537935|ref|ZP_13103564.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1026a]
gi|418545644|ref|ZP_13110896.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1258a]
gi|418545838|ref|ZP_13111080.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1258b]
gi|76580870|gb|ABA50345.1| GTP-binding protein YchF [Burkholderia pseudomallei 1710b]
gi|126218025|gb|ABN81531.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 668]
gi|134245307|gb|EBA45400.1| GTP-binding protein YchF [Burkholderia pseudomallei 305]
gi|157810556|gb|EDO87726.1| GTP-binding protein YchF [Burkholderia pseudomallei 406e]
gi|157938166|gb|EDO93836.1| GTP-binding protein YchF [Burkholderia pseudomallei Pasteur 52237]
gi|184211045|gb|EDU08088.1| GTP-binding protein YchF [Burkholderia pseudomallei 1655]
gi|254219560|gb|EET08944.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1710a]
gi|385345562|gb|EIF52260.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1258a]
gi|385349105|gb|EIF55696.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1026a]
gi|385366193|gb|EIF71830.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1258b]
gi|385657486|gb|AFI64909.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia
pseudomallei 1026b]
Length = 364
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L I+K
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALAEIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + +L+ +L + +L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKARAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+++E +K L+T KP ++VANVKE+GF+NN LD ++ YA ++ P++ +CA
Sbjct: 181 GLDLSDDEKALLKPFCLITAKPAMYVANVKEDGFENNPHLDAVRRYAESEKSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|187477050|ref|YP_785074.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella avium
197N]
gi|115421636|emb|CAJ48146.1| GTP-dependent nucleic acid-binding protein [Bordetella avium 197N]
Length = 363
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 282/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLGKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I +LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVGVLEKCIAHLNEAKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+++++ IK L +T K ++V NV ++GF NN LLD+L +A +N P++ ICA +
Sbjct: 181 LGLSDDDMALIKPLCFITAKTAMYVGNVSDDGFTNNPLLDRLTEFAAKRNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL + D++ FL ++G++E L+ LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLPDEDRQAFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y D++ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDYIACKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408416587|ref|YP_006627294.1| hypothetical protein BN118_2786 [Bordetella pertussis 18323]
gi|401778757|emb|CCJ64211.1| conserved hypothetical protein [Bordetella pertussis 18323]
Length = 363
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG+ GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MALQCGIAGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRE N +++V+RCF+D + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIREANAIVNVVRCFEDPNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I LN++ P+R
Sbjct: 121 PIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVTVLEKCIAQLNQAKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I L +T KP ++V NV ++GF +N LL++L +A ++N P++ ICA +
Sbjct: 181 LDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERLAEFAKSRNAPMVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL D++ FL ++G++E LN LIR +F+LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIVDLPEEDRQAFLLDMGMEEPGLNRLIRGAFTLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|114331141|ref|YP_747363.1| GTP-dependent nucleic acid-binding protein EngD [Nitrosomonas
eutropha C91]
gi|114308155|gb|ABI59398.1| GTP-binding protein YchF [Nitrosomonas eutropha C91]
Length = 363
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLAELSKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GAS+GEGLGN+FLA+IRET+ +++V+RCF D + H++G+++
Sbjct: 61 QRVQPAIVEFVDIAGLVAGASRGEGLGNQFLANIRETDAIVNVVRCFDDPNVVHVTGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL L+DLA +EK I +++KK ++ + +L+ +L++++ +LN+ P R
Sbjct: 121 PLADIEIILTELALADLATVEKAIVRDSKKMKSGDKEASKLVAVLEKLVLHLNQGQPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE IK L LLTIKP ++V NV E+GF+NN LD+L+ YA +N P++ +CAK+
Sbjct: 181 FPLSDEEREIIKSLCLLTIKPAMYVGNVLEDGFENNPHLDRLREYAAKENAPVVALCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL+ DKK FL +LGL+E LN LIR + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLDEADKKEFLADLGLEEPGLNRLIRTGYDLLGLQTYFTAGVKEVRAWTIHRGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA T+SY DF+ GE G K GK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGAIHTDFEKGFIRAQTVSYADFIACGGEAGAKEKGKMRVEGKDYIVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|319795867|ref|YP_004157507.1| GTP-binding protein ychf [Variovorax paradoxus EPS]
gi|315598330|gb|ADU39396.1| GTP-binding protein YchF [Variovorax paradoxus EPS]
Length = 363
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 199/362 (54%), Positives = 277/362 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L+ IV
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAQLSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ ++V+RCF D+ + H++G+++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATVNVVRCFDDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ + +L+ LL+R LN++ P+R
Sbjct: 121 PISDIEVIQTELCLADLATVEKALHRHTKVARSGDKDAQKLVGLLERCQAALNENTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ EE +K L+T KP +FV NV E+GF+NN LD+L+ YA Q P++ ICAK+
Sbjct: 181 LEFTKEEQPLVKSFTLITAKPAMFVGNVAEDGFENNPYLDRLREYAAKQGAPVVAICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +++++++ DKK FL +G E LN LIRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EADLAEMDDEDKKMFLAEIGQDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IH D ++G+IRA TI++ D++ +KGEQG K+AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHGDFEKGYIRAQTIAFDDYISFKGEQGAKDAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|452125960|ref|ZP_21938543.1| GTP-binding protein YchF [Bordetella holmesii F627]
gi|452129322|ref|ZP_21941898.1| GTP-binding protein YchF [Bordetella holmesii H558]
gi|451921055|gb|EMD71200.1| GTP-binding protein YchF [Bordetella holmesii F627]
gi|451925192|gb|EMD75332.1| GTP-binding protein YchF [Bordetella holmesii H558]
Length = 363
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L +IV
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLGKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GAS+GEGLGN+FL+HIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERVLPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI+TEL L+DL EK + + +K ++ + L+ +L++ I +LN++ P+R
Sbjct: 121 PIADIEVIETELGLADLQTAEKALHRHSKTARSGDKEAQRLVSVLEKCIAHLNEAKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L++++L IK L +T K ++V NV ++GF +N LLD+L +A +N P++ ICA +
Sbjct: 181 MGLSDDDLALIKPLCFITAKRAMYVGNVSDDGFTDNPLLDRLTEFATKRNAPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL + D++ FL ++G+ E LN LIRA+F LL L+TYFT G KE+RAWT+P G T
Sbjct: 241 ESEIVDLADEDRQAFLSDMGMDEPGLNRLIRAAFKLLGLQTYFTAGVKEVRAWTVPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y D++ KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDYIACKGEQGAKEAGKMRAEGKEYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|390568960|ref|ZP_10249249.1| GTP-binding protein YchF [Burkholderia terrae BS001]
gi|420256194|ref|ZP_14759051.1| GTP-binding protein YchF [Burkholderia sp. BT03]
gi|389939086|gb|EIN00926.1| GTP-binding protein YchF [Burkholderia terrae BS001]
gi|398043680|gb|EJL36563.1| GTP-binding protein YchF [Burkholderia sp. BT03]
Length = 364
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 282/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLTALAGIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DLA +EK + + K N+ +++L +L+++ L+++ P+R
Sbjct: 121 PVSDIEVINTELALADLATVEKALTRYAKAAKSGNDKEAVKLAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EEL+ I+ L+T KP ++VANVKE+GF+NN LD ++ YA +N P++ +CA
Sbjct: 181 GLDLTEEELLLIRPFCLITAKPAMYVANVKEDGFENNPHLDAVRKYAETENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL + DK+ FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLADEDKEVFLADMGMHEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TI + D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTIGFDDYIAYKGEQGAKEAGKMRAEGKEYIVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|309782972|ref|ZP_07677692.1| GTP-binding protein YchF [Ralstonia sp. 5_7_47FAA]
gi|404397670|ref|ZP_10989460.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia sp.
5_2_56FAA]
gi|308918396|gb|EFP64073.1| GTP-binding protein YchF [Ralstonia sp. 5_7_47FAA]
gi|348612559|gb|EGY62173.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia sp.
5_2_56FAA]
Length = 363
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 285/363 (78%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL+ L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DL+ +EK + + K N+ + +L+ +L++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLSTVEKALQRYTKAAKSGNDKEAAKLVAVLEKAQKVLDEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L ++E ++K L L+T KP ++VANV+E+GF+NN LD ++ YA N P++ +CA
Sbjct: 181 GLNLTDDEWATLKPLCLITAKPTMYVANVREDGFENNPHLDAVRNYAAQTNSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKAEFLADIGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TISY DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTISYDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFN 362
LF+
Sbjct: 361 LFH 363
>gi|299065553|emb|CBJ36724.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum CMR15]
Length = 364
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD+RL L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLSALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + +K N+ + +L+ +L++ L+++ +R
Sbjct: 121 PIADIEVINTELALADLATVEKALTRYSKAAKSGNDKEAAKLVAVLEKARGVLDEAKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL++EE +K L L+T KP ++VANVK++GF+NN LD ++ YA P++ +CA
Sbjct: 181 TLSLSDEEWALLKPLCLITAKPTMYVANVKDDGFENNPHLDAVRAYAAETGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKTEFLADMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAFDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|221065197|ref|ZP_03541302.1| GTP-binding protein YchF [Comamonas testosteroni KF-1]
gi|220710220|gb|EED65588.1| GTP-binding protein YchF [Comamonas testosteroni KF-1]
Length = 364
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 286/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERVVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL I LN+ P R
Sbjct: 121 PIADIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVALLTPIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+++++ E+ +K L+T KP +FV NV E+GF+NN LLD+LK YA Q P++ ICAK
Sbjct: 181 VVAVSKEDAPLLKPFCLITAKPAMFVGNVSEDGFENNPLLDRLKEYAEAQGAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL LGL+E LN LIRA F LL L+TYFT G+KE+RAWT+ G
Sbjct: 241 IEAEMAEMEDEDRDMFLQELGLEEPGLNRLIRAGFKLLGLQTYFTAGEKEVRAWTVRVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++D++ +KGEQG K+AGK+R+EGK+Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDYIAFKGEQGAKDAGKMRAEGKEYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|378824025|ref|ZP_09846581.1| GTP-binding protein YchF [Sutterella parvirubra YIT 11816]
gi|378597163|gb|EHY30495.1| GTP-binding protein YchF [Sutterella parvirubra YIT 11816]
Length = 364
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 282/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKST+FNALTK I+AENYPFCTIEPN+G++EVPD RLK L IVK
Sbjct: 1 MGLKCGIVGLPNVGKSTIFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + H++RCF DD I H+SG +N
Sbjct: 61 ERVVPAAVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNIVHVSGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D VI TEL L+DL +EK +++ +K+ + +++L+ +L++I LN+ +R
Sbjct: 121 PIDDINVINTELALADLQTVEKALNRYSKQARSGGDKEALKLVLVLEKIQPALNEGKSVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EEL +I+ L LLT KP+++VANV+++GF+ N LLD ++ +A +N P++ +CAK
Sbjct: 181 SVDLTAEELATIRQLFLLTAKPVMYVANVEDHGFEGNPLLDAVREFAATENAPVVAVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E +I+DL+ DK FL+++G+ E L+ +IRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEADIADLDEEDKAMFLEDMGMHEPGLDRVIRAGYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ +KGE+G + AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFIAFKGEKGAQEAGKMRAEGKDYVVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|430809717|ref|ZP_19436832.1| GTP-binding protein YchF [Cupriavidus sp. HMR-1]
gi|429497830|gb|EKZ96351.1| GTP-binding protein YchF [Cupriavidus sp. HMR-1]
Length = 363
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD+RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ ++ L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYIKPARAGDKEALRLVAVLEKAQAVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +++ L+T KP ++VANV+E+GF+NN LD ++ YA P++ +CA +
Sbjct: 181 LDLAPEEWEALRPFCLITAKPTMYVANVREDGFENNPHLDAVREYAKTTGSPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y DF+ +KGE G K AGK+R+EGK+Y+V DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAYDDFISFKGEHGAKEAGKMRAEGKEYVVHDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325983636|ref|YP_004296038.1| GTP-binding protein YchF [Nitrosomonas sp. AL212]
gi|325533155|gb|ADZ27876.1| GTP-binding protein YchF [Nitrosomonas sp. AL212]
Length = 363
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 285/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+GI+EVPD RL+ L++IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIDPNVGIVEVPDPRLQKLSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ +++++RCF DD + H++G+++
Sbjct: 61 QKVQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDGIVNMVRCFSDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK I +E+K N+ +I+L LL+ + +LN+ P R
Sbjct: 121 PISDIEVIQTELALADLATVEKAIQRESKVAKSGNKDAIKLCALLETMQAHLNQGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ + ++ L LLT KP I+VANV ++GF NN LL +++ YA + P++ ICA L
Sbjct: 181 LDLDKEQKLLLQPLCLLTAKPAIYVANVDDHGFVNNPLLTRVEEYAAQEGAPVVAICAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK+ FL +L L+E LN L+RA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELSDEDKQIFLADLNLEEPGLNRLVRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA SY+DF+ Y GEQG K AGK+R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTSYEDFIAYNGEQGAKEAGKMRLEGKEYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386332278|ref|YP_006028447.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
solanacearum Po82]
gi|334194726|gb|AEG67911.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
solanacearum Po82]
Length = 364
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 282/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +IV+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDLRLSALADIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + +K N+ + +L+ +L + L+++ +R
Sbjct: 121 PIADIEVINTELALADLATVEKAQARYSKAAKSGNDKEAAKLVAVLDKARSVLDEAKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL++EE +K L L+T KP ++VANVK++GF+NNL LD ++ YA P++ +CA
Sbjct: 181 TLSLSDEEWALLKPLCLITAKPTMYVANVKDDGFENNLHLDAVRAYAAQTGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKIEFLADMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAYDDFIQYKGEQGAKEAGKMRAEGKDYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|237654287|ref|YP_002890601.1| GTP-dependent nucleic acid-binding protein EngD [Thauera sp. MZ1T]
gi|237625534|gb|ACR02224.1| GTP-binding protein YchF [Thauera sp. MZ1T]
Length = 363
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+GI+EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIQAENYPFCTIEPNVGIVEVPDPRLAALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ ++HV+RCF DD + H+SG ++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADDNVIHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D+A +EK +++ + ++ + L+ +L++ L++ +R
Sbjct: 121 PIRDIEVIDTELALADMATVEKALNRYKRPAASGDKEAKILVAVLEKCFAQLDQGKAVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE S+K L+T KP+++ ANV E+GF+NN LD ++ +A + ++ +CA +
Sbjct: 181 LDLSKEEWASLKPFCLITAKPVLYAANVAEDGFENNPHLDAVRAHAAAEGAEVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + DKK FL+ +GL+E L+ LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLEDADKKEFLETMGLEEPGLDRLIRAGYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y DF+ YKGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDFIQYKGEAGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|94312124|ref|YP_585334.1| GTP-binding protein YchF [Cupriavidus metallidurans CH34]
gi|93355976|gb|ABF10065.1| putative GTP-binding protein [Cupriavidus metallidurans CH34]
Length = 363
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ ++ L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYIKPARAGDKEALRLVAVLEKAQAVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +++ L+T KP ++VANV+E+GF+NN LD ++ YA P++ +CA +
Sbjct: 181 LDLAPEEWEALRPFCLITAKPTMYVANVREDGFENNPHLDAVREYAKTTGSPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y DF+ +KGE G K AGK+R+EGK+Y+V DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAYDDFIAFKGEHGAKEAGKMRAEGKEYVVHDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|330815408|ref|YP_004359113.1| GTP-binding protein YchF [Burkholderia gladioli BSR3]
gi|327367801|gb|AEA59157.1| GTP-binding protein YchF [Burkholderia gladioli BSR3]
Length = 364
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK ++ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKAISAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G ++
Sbjct: 61 ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ +++L L+++ +L++ +R
Sbjct: 121 PLDDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAVKLAAALEKVRAHLDQGKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+ +E +K L+T KP ++VANVK++GF+NN LD ++ YA + P++ +CA
Sbjct: 181 GLDLSEDERAILKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAEAEKAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK+ FL ++G+ E L+ +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKEAFLADMGMDEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI Y+D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIGYEDYIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|418529871|ref|ZP_13095798.1| GTP-binding protein YchF [Comamonas testosteroni ATCC 11996]
gi|371452927|gb|EHN65952.1| GTP-binding protein YchF [Comamonas testosteroni ATCC 11996]
Length = 365
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 283/363 (77%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL I LN+ P R
Sbjct: 121 PISDIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVALLTPIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++S++ E+ +K L+T KP +FV NV E+GF+NN LD+LK YA Q P++ ICAK
Sbjct: 181 VVSVSKEDAPLLKPFCLITAKPAMFVGNVSEDGFENNPFLDRLKEYAEAQGAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL LGL+E LN LIRA F LL L+TYFT G+KE+RAWT+ G
Sbjct: 241 IEAEMAEMEDEDRDMFLQELGLEEPGLNRLIRAGFKLLGLQTYFTAGEKEVRAWTVRVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++DF+ +KGEQG K+AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDFVAFKGEQGAKDAGKMRAEGKEYIVRDGDVMNF 360
Query: 360 LFN 362
LF+
Sbjct: 361 LFS 363
>gi|347541312|ref|YP_004848738.1| GTP-binding protein YchF [Pseudogulbenkiania sp. NH8B]
gi|345644491|dbj|BAK78324.1| GTP-binding protein YchF [Pseudogulbenkiania sp. NH8B]
Length = 363
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAELAKIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD + H++G+++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK I ++ KK ++ +I L+ +L+++ +L++ +P R
Sbjct: 121 PISDIETIGTELALADLTTVEKAIQRDGKKAKSGDKDAIRLIAVLEKVRAHLDQGLPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE + +K LLTIKP ++VANV E+GF NN LD+LK A + P++ +CA +
Sbjct: 181 LGLDAEEQVLLKPFCLLTIKPAMYVANVAEDGFDNNPHLDKLKALADKEGAPVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L++ DK FL +GL+E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIVELDDADKAEFLAEMGLEEPGLNRLIRAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TISY DF+ GE K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYDDFIACGGEAKAKEAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|300702906|ref|YP_003744507.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia
solanacearum CFBP2957]
gi|421890576|ref|ZP_16321433.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum K60-1]
gi|299070568|emb|CBJ41863.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum CFBP2957]
gi|378964078|emb|CCF98181.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum K60-1]
Length = 364
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 282/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDLRLSALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + +K N+ + +L+ +L + L+++ +R
Sbjct: 121 PIADIEVINTELALADLATVEKAQARYSKAAKSGNDKEAAKLVAVLDKARSVLDEAKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL++EE +K L L+T KP ++VANVK++GF+NN LD ++ YA P++ +CA
Sbjct: 181 TLSLSDEEWALLKPLCLITAKPTMYVANVKDDGFENNPHLDAVRAYAAQTGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKIEFLADMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAYDDFIQYKGEQGAKEAGKMRAEGKEYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|74316408|ref|YP_314148.1| GTP-dependent nucleic acid-binding protein EngD [Thiobacillus
denitrificans ATCC 25259]
gi|74055903|gb|AAZ96343.1| Conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 363
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN G++EVPD RL L +VK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQAGIAAENYPFCTIEPNTGVVEVPDPRLDELAKVVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D+ + H++G+++
Sbjct: 61 QRVVPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAICHVVRCFHDENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DLA EK + + K ++ + ++ LK ++ LN+ P R
Sbjct: 121 PLSDVETIATELALADLASAEKALARYEKPARAGDKEAQHMVAALKPVVAALNEGRPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ E L IK L L+T+KP ++VANV E+GF +N LLD L +A + P++ +CA L
Sbjct: 181 AGLDAEGLARIKPLCLMTVKPTLYVANVDEDGFHDNPLLDALTAFAEKEGAPVVPVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ ++ +L+ LG E LN LIRA+++LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELQELSPEERVEYLNELGWDEPGLNRLIRAAYALLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TIS+ DF+ +GEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISFDDFIACQGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|264680169|ref|YP_003280078.1| GTP-binding protein YchF [Comamonas testosteroni CNB-2]
gi|299534008|ref|ZP_07047360.1| GTP-binding protein YchF [Comamonas testosteroni S44]
gi|262210684|gb|ACY34782.1| GTP-binding protein YchF [Comamonas testosteroni CNB-2]
gi|298717917|gb|EFI58922.1| GTP-binding protein YchF [Comamonas testosteroni S44]
Length = 365
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 283/363 (77%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN G++EVPD RL L+ +VK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLDQLSEVVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GASKGEGLGN+FLAHIRET+ +++V+RCF+D + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVIQTEL L+DLA +EK +++ +K N+ + +L+ LL I LN+ P R
Sbjct: 121 PISDIEVIQTELCLADLATVEKALNRYSKAAKSGNDKEAAKLVALLTPIQAALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++S++ E+ +K L+T KP +FV NV E+GF+NN LD+LK YA Q P++ ICAK
Sbjct: 181 VVSVSKEDAPLLKPFCLITAKPAMFVGNVSEDGFENNPFLDRLKEYAEAQGAPVVAICAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E E++++ + D+ FL LGL+E LN LIRA F LL L+TYFT G+KE+RAWT+ G
Sbjct: 241 IEAEMAEMEDEDRDMFLQELGLEEPGLNRLIRAGFKLLGLQTYFTAGEKEVRAWTVRVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IH D +RGFIRA TI+++DF+ +KGEQG K+AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGVIHGDFERGFIRAQTIAFEDFVAFKGEQGAKDAGKMRAEGKEYIVRDGDVMNF 360
Query: 360 LFN 362
LF+
Sbjct: 361 LFS 363
>gi|319945390|ref|ZP_08019651.1| GTP-dependent nucleic acid-binding protein EngD [Lautropia
mirabilis ATCC 51599]
gi|319741383|gb|EFV93809.1| GTP-dependent nucleic acid-binding protein EngD [Lautropia
mirabilis ATCC 51599]
Length = 363
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L IV+
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAKLAEIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D + H++G ++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDPNVVHVNGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +E+ +E KK ++ ++ L LL+++ +LN+ P R
Sbjct: 121 PIADIETIVTELALADLATIERVHAREIKKARAGDKEALRLTTLLEKLQPHLNEGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ +K L+T+KP ++VANV E+GF+NN LD+L+ +A + P++ +CA++
Sbjct: 181 LDLSAEDKALLKPYGLMTLKPAMYVANVSEDGFQNNPYLDRLREHAAKEGAPVVALCAQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++DL++ DK FL +LGL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELADLDDEDKLAFLADLGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAFDDFIQYKGEQGAKEAGKMRAEGKDYVVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|224823795|ref|ZP_03696904.1| GTP-binding protein YchF [Pseudogulbenkiania ferrooxidans 2002]
gi|224604250|gb|EEG10424.1| GTP-binding protein YchF [Pseudogulbenkiania ferrooxidans 2002]
Length = 363
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L I+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAELAKIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD + H++G+++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK I ++ KK ++ +I L+ +L+++ +L++ +P R
Sbjct: 121 PISDIETIGTELALADLTTVEKAIQRDGKKAKSGDKDAIRLIAVLEKVRAHLDQGLPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +K LLTIKP ++VANV E+GF NN LD+LK A + P++ +CA +
Sbjct: 181 LGLDAEEQALLKPFCLLTIKPAMYVANVAEDGFDNNPHLDKLKALADKEGAPVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L++ DK FL +GL+E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIVELDDADKAEFLAEMGLEEPGLNRLIRAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TISY DF+ GE K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYDDFIACGGEAKAKEAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|413959612|ref|ZP_11398846.1| GTP-binding protein YchF [Burkholderia sp. SJ98]
gi|413940195|gb|EKS72160.1| GTP-binding protein YchF [Burkholderia sp. SJ98]
Length = 364
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 285/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + +K N+ +I+L+ +L+++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLATVEKAQARYSKAAKSGNDKEAIKLVAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL EEL+ IK L+T KP ++VANVK++GF+NN LD ++ +A +N P++ +CA
Sbjct: 181 GLSLTEEELLLIKPFCLITSKPTMYVANVKDDGFENNPHLDAVRKHAEAENAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKLEFLADMGMDEPGLNRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPQAAGAIHTDFERGFIRAQTISFDDYIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|398803276|ref|ZP_10562382.1| GTP-binding protein YchF [Polaromonas sp. CF318]
gi|398097155|gb|EJL87467.1| GTP-binding protein YchF [Polaromonas sp. CF318]
Length = 363
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/362 (58%), Positives = 278/362 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLSQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PAI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ I+V+RCF+DD + H++G+++
Sbjct: 61 ERIVPAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ S +L+ +L++ LN+ P+R
Sbjct: 121 PISDIEVIQTELCLADLAAVEKALQRVTKVARSGDKESAKLVVILEKCQAALNEGKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EEL +K L+T KP +FVANV E+GF NN LLD+LK YA Q P++ ICAK+
Sbjct: 181 LDFSKEELPLLKQFFLITAKPAMFVANVAEDGFDNNPLLDRLKAYAEAQKAPVVAICAKM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++D+ DKK FL +G E LN LI A++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEMADMEEEDKKMFLAEIGQDEPGLNRLILAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI++ D++ YKGEQG K+AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAFADYIAYKGEQGAKDAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|300690284|ref|YP_003751279.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum PSI07]
gi|299077344|emb|CBJ49969.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia
solanacearum PSI07]
gi|344169092|emb|CCA81416.1| GTP-dependent nucleic acid-binding protein engD [blood disease
bacterium R229]
gi|344172580|emb|CCA85224.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia syzygii
R24]
Length = 364
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 283/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +IV+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDTRLTALADIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + + +K N+ + +L+ +L++ L+++ P+R
Sbjct: 121 PIADIEVINTELALADLATVEKALARYSKAAKSGNDKEAAKLVAVLEKAQKVLDEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L +EE ++K L L+T KP ++VANV ++GF+NN LD ++ YA P++ +CA
Sbjct: 181 GLNLTDEEWATLKPLCLITAKPTMYVANVLDHGFENNPHLDAVRAYAAQTGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKTEFLVDMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAYDDFIQYKGEQGAKEAGKMRAEGKDYVVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|456062478|ref|YP_007501448.1| GTP-binding protein YchF [beta proteobacterium CB]
gi|455439775|gb|AGG32713.1| GTP-binding protein YchF [beta proteobacterium CB]
Length = 364
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 282/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H++G+I+
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDANVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D VI TEL LSDL +EK + + +K N+ + L+ +L ++ +L+++ P+R
Sbjct: 121 PISDIAVIDTELALSDLTTVEKTLQRSSKAAKSGNDKEAAALVAVLTKVQAHLDQAQPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE + +K L L+T KP +++ANVKE+GF NN L+ + +A + P++ +CA
Sbjct: 181 SLKLSDEENLLLKPLCLITAKPAMYIANVKEDGFDNNPHLEAVIQHAAKEGAPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL +LG++E+ L+ +IRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKLEFLADLGMEESGLDRVIRAGYKLLGLQTYFTAGVKEVRAWTIHQGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+++DF+ +KGE G K AGK+R+EGK+Y+V+DGD+LNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAFEDFIQFKGESGAKEAGKMRAEGKEYVVKDGDVLNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|389873387|ref|YP_006380806.1| GTP-binding protein YchF [Advenella kashmirensis WT001]
gi|388538636|gb|AFK63824.1| GTP-binding protein YchF [Advenella kashmirensis WT001]
Length = 363
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD+RL L +VK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDERLNKLAEVVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +HV+RCF+D+ + H++G++N
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDATVHVVRCFEDENVIHVAGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D+ EK + + K ++ + L LL++II LN++ IR
Sbjct: 121 PISDIEVINTELALADMGTAEKALLRAQKTGRAGDKEAQRLAGLLEKIIAVLNEARSIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+ ++L IK +T KP ++VANVKE+GF +N L ++ +A +N P++ +CA +
Sbjct: 181 MNLDKDDLDLIKPYCFITAKPAMYVANVKEDGFTDNPHLAAVQEFAAKENAPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDEDKNVFLADMGMDEPGLNRVIRAAFRLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD +RGFIRA TI+Y+DF+ +KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APRAAAAIHTDFERGFIRAQTIAYEDFITHKGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421748003|ref|ZP_16185652.1| GTP-binding protein YchF [Cupriavidus necator HPC(L)]
gi|409773310|gb|EKN55132.1| GTP-binding protein YchF [Cupriavidus necator HPC(L)]
Length = 363
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RLK L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H++G+++
Sbjct: 61 ERVVPATVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDPNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ + L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYVKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +++ L+T KP ++VANV+E+GF+NN LD ++ YA P++ +CA +
Sbjct: 181 LDLAPEEWDALRPFCLITAKPTMYVANVREDGFENNPHLDAVRKYAETTKSPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLEDEDKAVFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+++DF+ +KGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAFEDFIAFKGEQGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|83747496|ref|ZP_00944534.1| GTP-binding protein, probable translation factor [Ralstonia
solanacearum UW551]
gi|207744455|ref|YP_002260847.1| gtp-binding protein [Ralstonia solanacearum IPO1609]
gi|421895778|ref|ZP_16326177.1| gtp-binding protein [Ralstonia solanacearum MolK2]
gi|83725810|gb|EAP72950.1| GTP-binding protein, probable translation factor [Ralstonia
solanacearum UW551]
gi|206586943|emb|CAQ17527.1| gtp-binding protein [Ralstonia solanacearum MolK2]
gi|206595861|emb|CAQ62788.1| gtp-binding protein [Ralstonia solanacearum IPO1609]
Length = 364
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 281/364 (77%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +IV+
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDLRLSALADIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
PI D EVI TEL L+DLA +EK + +K N+ + +L+ +L + L+++ +R
Sbjct: 121 PIADIEVINTELALADLATVEKAQARYSKAAKSGNDKEAAKLVAVLDKARSVLDEAKAVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+SL++EE +K L L+T KP ++VANVK++GF+NN LD ++ YA P++ +CA
Sbjct: 181 TLSLSDEEWALLKPLCLITAKPTMYVANVKDDGFENNPHLDAVRAYAAQTGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL++ DK FL ++G+ E LN +IRA+F LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIADLDDADKIEFLADMGMDEPGLNRVIRAAFKLLGLQTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AA IHTD +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK Y+V+DGD+L+F
Sbjct: 301 TAPRAAAAIHTDFERGFIRAQTIAYDDFIQYKGEQGAKEAGKMRAEGKDYIVKDGDVLHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|358635734|dbj|BAL23031.1| GTP-binding protein [Azoarcus sp. KH32C]
Length = 363
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ ++HV+RCF DD + H+SG ++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADDNVVHVSGNVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D+A +EK +++ + ++ + L+ +L++ + LN++ P+R
Sbjct: 121 PIRDIEVIDTELALADMATVEKAVNRYKRPAAAGDKEAKILVAVLEKCLAQLNEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EE +IK L+T KP+++ ANV E+GF NN LD ++ +A + ++ +CA +
Sbjct: 181 LDFSKEEWAAIKPFCLITAKPVLYAANVAEDGFANNPHLDAVRAHAAAEGAQVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DKK FL+++GL+E L+ LIRA ++LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKKDFLESMGLEEPGLDRLIRAGYTLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ +KGE G K AGK+R+EGK+Y+V DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFIAFKGEAGAKEAGKMRAEGKEYVVRDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|253999720|ref|YP_003051783.1| GTP-dependent nucleic acid-binding protein EngD [Methylovorus
glucosetrophus SIP3-4]
gi|313201768|ref|YP_004040426.1| GTP-binding protein ychf [Methylovorus sp. MP688]
gi|253986399|gb|ACT51256.1| GTP-binding protein YchF [Methylovorus glucosetrophus SIP3-4]
gi|312441084|gb|ADQ85190.1| GTP-binding protein YchF [Methylovorus sp. MP688]
Length = 361
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/361 (55%), Positives = 282/361 (78%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+T+ I+AENYPFCTIEPN+GI+EVPD RLK L +IV +K
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITRAGIAAENYPFCTIEPNVGIVEVPDPRLKPLIDIVNPQK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D + H++G+++P+
Sbjct: 61 VQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDGNVVHVAGKVDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E I TEL LSD+ +EK + +E KK ++ +I L +L++I L++S P+R +
Sbjct: 121 DDIETINTELALSDMETVEKTLQREGKKAKSGDKEAIALCAVLEKIQKWLDESKPVRTLG 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L+ ++L IK L L+T+KP++++ANV E+GF+NN LLD++ +N P++ ICAK+E
Sbjct: 181 LDADQLQLIKPLCLITVKPVMYLANVDESGFENNPLLDKVVNLGKAENAPVVAICAKIES 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
EI+DL + DK FL LGL+E L+ +IRA++SLL L+TYFT G KE+RAWT+ G+TA
Sbjct: 241 EIADLEDEDKAMFLTELGLEEPGLDRVIRAAYSLLGLQTYFTAGVKEVRAWTVKRGSTAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG+IHTD +RGFIRA I+Y++F+ KGEQG K AGK+R EGK+Y+++DGD+++F FN
Sbjct: 301 QAAGVIHTDFERGFIRAEVIAYEEFVKNKGEQGAKEAGKMRLEGKEYIMQDGDVVHFRFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|339327363|ref|YP_004687056.1| GTP-dependent nucleic acid-binding protein EngD [Cupriavidus
necator N-1]
gi|338167520|gb|AEI78575.1| GTP-dependent nucleic acid-binding protein EngD [Cupriavidus
necator N-1]
Length = 363
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 281/363 (77%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRE + + HV+RCF+DD + H++G+++
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ ++ L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYIKPARAGDKEALRLVAVLEKAQAVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I+ L+T KP ++VANV+E+GFKNN LD ++ +A N P++ +CA +
Sbjct: 181 LDLAPEEWEAIRPFCLITAKPTMYVANVREDGFKNNPHLDAVREHAKLTNSPVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y+DF+ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAYEDFISFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|194290869|ref|YP_002006776.1| gtp-dependent nucleic acid-binding protein engd [Cupriavidus
taiwanensis LMG 19424]
gi|193224704|emb|CAQ70715.1| putative GTP-binding protein with nucleoside triP hydrolase domain,
engD homolog [Cupriavidus taiwanensis LMG 19424]
Length = 363
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 277/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L +IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + HV+RCF+DD + H++G ++
Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDDNVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ + L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYVKPARAGDKEAQRLVAVLEKAQSVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I+ L+T KP ++VANV+E+GF NN LD ++ YA + P++ +CA +
Sbjct: 181 LDLAPEEWDAIRPFCLITAKPTMYVANVREDGFDNNPHLDAVREYAKQTDSPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y DF+ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAYDDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|113869281|ref|YP_727770.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia eutropha
H16]
gi|113528057|emb|CAJ94402.1| Predicted GTP-binding protein [Ralstonia eutropha H16]
Length = 363
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + HV+RCF+DD + H++G+++
Sbjct: 61 ERVLPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DLA +EK + + K ++ + L+ +L++ L+++ +R
Sbjct: 121 PLSDIEVINTELALADLATVEKALARYIKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I+ L+T KP ++VANV+E+GF+NN LD ++ YA N P++ +CA +
Sbjct: 181 LDLAPEEWEAIRPFCLITAKPTMYVANVREDGFENNPHLDAVREYAKLTNSPVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y+DF+ +KGE G K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APKAAGVIHTDFERGFIRAQTIAYEDFISFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|330999046|ref|ZP_08322771.1| GTP-binding protein YchF [Parasutterella excrementihominis YIT
11859]
gi|329575788|gb|EGG57314.1| GTP-binding protein YchF [Parasutterella excrementihominis YIT
11859]
Length = 364
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 275/364 (75%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IV
Sbjct: 1 MGLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + H++RCF DD I H++G +
Sbjct: 61 QRIVPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNIVHVAGHVA 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D VI EL L+DLA ++K ++K K+ + +++L+ +L++I LN+ P R
Sbjct: 121 PLEDISVINMELALADLASVDKQLNKYTKQARSGGDKEALKLVTVLEKIRPALNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+ +E IK L LLT+KP+++VANV+E+GF+NN LL+++K + P++ +CAK
Sbjct: 181 SVDLSKDEKAVIKQLCLLTMKPVMYVANVEEDGFENNALLEEVKAVGVEEKAPVVAVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EISDL + +K+ FL+++G+ E LN +IRA++ LL L TYFT G KE+RAWTI G
Sbjct: 241 IEAEISDLPDEEKQIFLEDIGMHEPGLNRVIRAAYQLLGLETYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD +RGFIRA TISY DF+ YKGE G K AGK+R EGK Y+V+DGDI+NF
Sbjct: 301 LAPQAAGVIHTDFERGFIRAQTISYDDFVQYKGEAGAKEAGKLRVEGKDYVVQDGDIMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|34499510|ref|NP_903725.1| GTP-dependent nucleic acid-binding protein EngD [Chromobacterium
violaceum ATCC 12472]
gi|34105360|gb|AAQ61715.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 363
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 277/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L I+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDHRLGELAKIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D I H++G+++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDPNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL+ +EK I +E KK ++ + L+ +L++++ +LN+ P R
Sbjct: 121 PIADIETILTELALADLSAVEKAIAREGKKAKAGDKDARALIAILEKLVPHLNEGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ IK L LLTIKP ++VANV E+GF +N LL +++ YA + P++ +CA +
Sbjct: 181 LGLSDEDKALIKPLCLLTIKPAMYVANVAEDGFSDNPLLAKVEEYAAKEGAPVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + DK FL+ LGL+E L+ LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDADKAEFLETLGLEEPGLDRLIRAGYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TIS++DF+ GE K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTISFQDFVTLGGEAKAKEAGKMRAEGKDYVVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|303256351|ref|ZP_07342367.1| GTP-binding protein YchF [Burkholderiales bacterium 1_1_47]
gi|302861080|gb|EFL84155.1| GTP-binding protein YchF [Burkholderiales bacterium 1_1_47]
Length = 364
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 277/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IV
Sbjct: 1 MGLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + H++RCF DD I H++G ++
Sbjct: 61 QRIVPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNIVHVAGHVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLK-NEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D VI EL L+DLA ++K ++K K+ ++ +++L+ +L++I LN+ P R
Sbjct: 121 PLEDISVINMELALADLASVDKQLNKYTKQARSGGDKEALKLVTVLEKIRPVLNEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+ +E IK L LLT+KP+++VANV+E+GF+NN LL+++K + P++ +CAK
Sbjct: 181 SVDLSKDEKAVIKQLCLLTMKPVMYVANVEEDGFENNALLEEVKAVGVEEKAPVVAVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EISDL + +K+ FL+++G+ E LN +IRA++ LL L TYFT G KE+RAWTI G
Sbjct: 241 IEAEISDLPDEEKQIFLEDIGMHEPGLNRVIRAAYQLLGLETYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD +RGFIRA TISY DF+ YKGE G K AGK+R EGK Y+V+DGDI+NF
Sbjct: 301 LAPQAAGVIHTDFERGFIRAQTISYDDFVQYKGEAGAKEAGKLRVEGKDYVVQDGDIMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|348617911|ref|ZP_08884445.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816855|emb|CCD29099.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 364
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 271/366 (74%), Gaps = 5/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+G++EVPD RL L +V+
Sbjct: 1 MRLKCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNLGVVEVPDPRLSALAALVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLVSGA++GEGLGN+FLA+IRET+ ++HV+RCF++ + H+SG+++
Sbjct: 61 ERVVPAAVEFVDIAGLVSGAAQGEGLGNQFLANIRETDAIVHVVRCFQEPDVVHVSGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIE---LLKLLKRIIFNLNKSIP 177
P D EVI TEL L DLA ++K + + K K+ HS E +L LL++++ +LN + P
Sbjct: 121 PRADIEVIHTELALVDLATVDKALARSAKA--AKSGHSKEAAQMLALLQKMLAHLNAAQP 178
Query: 178 IRLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIIC 237
R + L EE + L LLT+KP ++VANV E+G + LL+ + A + P++ +C
Sbjct: 179 ARTLGLTAEERALLAPLCLLTVKPALYVANVDEDGLSEHPLLNAAQRIADAERAPLVPVC 238
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A LE E++DL+ D+ FL +GL E LN +IRA F L L TYFT G KE+RAWTIP
Sbjct: 239 AALEAELADLSQDDQAAFLAEMGLSEPGLNRVIRAGFECLGLHTYFTAGVKEVRAWTIPR 298
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG IH+D +RGFIRA T++Y DFL ++GEQG K AGK+RSEGK+Y+V+DGD++
Sbjct: 299 GATAPQAAGAIHSDFERGFIRAQTVAYDDFLAHQGEQGAKEAGKMRSEGKEYVVQDGDVI 358
Query: 358 NFLFNI 363
+FLFN+
Sbjct: 359 HFLFNV 364
>gi|349610327|ref|ZP_08889682.1| GTP-dependent nucleic acid-binding protein engD [Neisseria sp.
GT4A_CT1]
gi|348610210|gb|EGY59908.1| GTP-dependent nucleic acid-binding protein engD [Neisseria sp.
GT4A_CT1]
Length = 363
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPYLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|73542721|ref|YP_297241.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia eutropha
JMP134]
gi|72120134|gb|AAZ62397.1| Conserved hypothetical protein 92 [Ralstonia eutropha JMP134]
Length = 387
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD RL L IVK
Sbjct: 25 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKP 84
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + HV+RCF+D+ + H++G ++
Sbjct: 85 ERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDENVIHVAGRVD 144
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + K ++ + L+ +L++ L+++ +R
Sbjct: 145 PLSDIEVINTELALADLGTVEKALARYIKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRT 204
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I+ L+T KP ++VANV+E+GF+NN LD ++ YA N P++ +CA +
Sbjct: 205 LDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENNPHLDAVREYAKQTNSPVVAVCAAI 264
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DK FL +LG++E L+ +IRA F LL L+TYFT G KE+RAWTI G T
Sbjct: 265 EAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHVGDT 324
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TISY D++ +KGE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 325 APKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGAKEAGKMRAEGKEYVVKDGDVLNFL 384
Query: 361 FNI 363
FN+
Sbjct: 385 FNV 387
>gi|332285371|ref|YP_004417282.1| GTP-dependent nucleic acid-binding protein EngD [Pusillimonas sp.
T7-7]
gi|330429324|gb|AEC20658.1| GTP-dependent nucleic acid-binding protein EngD [Pusillimonas sp.
T7-7]
Length = 363
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 284/363 (78%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNA+TK I+AENYPFCTIEPN+G++EVPD RL L +IVK
Sbjct: 1 MALQCGIVGLPNVGKSTLFNAVTKAGIAAENYPFCTIEPNVGVVEVPDARLAALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ ++HV+RCF+DD + H++G I+
Sbjct: 61 ERVLPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFEDDNVIHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+DLA EK + + K ++ +I+L+ LL++II LN++ P+R
Sbjct: 121 PISDIEVINTELALADLATAEKALQRNQKTARAGDKEAIKLVALLEKIIPVLNEARPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E IK +T K ++VANVKE+GF+NN L ++ YA +N P++ +CA +
Sbjct: 181 LGLDEDEQALIKPFCFITAKRCMYVANVKEDGFENNKHLAAVQQYAEAENAPVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FLD++G+ E LN +IRA++SLL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELDDEDKSVFLDDMGMDEPGLNRVIRAAYSLLGLQTYFTAGVKEVRAWTILIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA TI+Y DF+ KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APRAAGVIHTDFERGFIRAQTIAYDDFIACKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|225024260|ref|ZP_03713452.1| hypothetical protein EIKCOROL_01133 [Eikenella corrodens ATCC
23834]
gi|224943285|gb|EEG24494.1| hypothetical protein EIKCOROL_01133 [Eikenella corrodens ATCC
23834]
Length = 363
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M++KCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSMKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+I+ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKILPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +EL +K L LLT KP ++V NV E+GF NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDADELAMLKPLFLLTAKPAMYVGNVAEDGFDNNPHLDRLKALAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYNDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|297539290|ref|YP_003675059.1| GTP-binding protein YchF [Methylotenera versatilis 301]
gi|297258637|gb|ADI30482.1| GTP-binding protein YchF [Methylotenera versatilis 301]
Length = 361
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/361 (54%), Positives = 283/361 (78%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+TK I+AENYPFCTIEPN+GI+EVPD R++ L +IVK +K
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRMQALIDIVKPQK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D + H+S +I+P+
Sbjct: 61 VQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDANVIHVSNKIDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D EVI TEL L+D+ +EK + +E+KK ++ +I LLK+L++++ L+++ +R ++
Sbjct: 121 SDIEVINTELALADMETVEKTMQRESKKAKSGDKDAIALLKVLEKVVPCLDQAKAVRTLN 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L+ EEL +K L L+T+KP++++ANV E+GF+NN LLD++ + P++ ICAK+E
Sbjct: 181 LDAEELQLLKPLCLITVKPVMYLANVDESGFENNPLLDKVVALGKAEGAPVVCICAKIEG 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
EIS+L+ DK FL LG +E LN +IRA++ LL L+TYFT G +E+RAWT+ G TA
Sbjct: 241 EISELDEEDKLLFLSELGQEEPGLNRVIRAAYDLLGLQTYFTAGVQEVRAWTVKKGATAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG+IHTD +RGFIRA I Y++++ KGEQG K AGK+R EGK+Y+V+DGD+++F FN
Sbjct: 301 QAAGVIHTDFERGFIRAEVIQYEEYVKNKGEQGSKEAGKMRLEGKEYIVQDGDVMHFRFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|319639343|ref|ZP_07994094.1| GTP-binding protein [Neisseria mucosa C102]
gi|317399527|gb|EFV80197.1| GTP-binding protein [Neisseria mucosa C102]
Length = 363
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|372487717|ref|YP_005027282.1| GTP-binding protein YchF [Dechlorosoma suillum PS]
gi|359354270|gb|AEV25441.1| GTP-binding protein YchF [Dechlorosoma suillum PS]
Length = 363
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 287/363 (79%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD R+ L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRMAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D + H+SG+++
Sbjct: 61 QRMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDPNVVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA++E+ I ++ KK ++ + +L+ +L++++ +LN+ P R
Sbjct: 121 PIADIETIITELALADLAVVERTIARDGKKAKSGDKEAQKLVAVLEKLLPHLNEGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++++ + +K L LLT+KP ++V NV E+GF+NN LD+L+ +A + P++ +CAK+
Sbjct: 181 AGLSDDDKLIVKPLCLLTVKPAMYVGNVMEDGFENNPHLDRLREHAAKEGAPVVAVCAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++DL + DK+ FL +LGL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EEELADLEDEDKQAFLADLGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA TI+Y DF+ +KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGVIHTDFEKGFIRAQTIAYADFIAFKGEQGAKEAGKMRSEGKEYVVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|345874961|ref|ZP_08826758.1| hypothetical protein l11_08420 [Neisseria weaveri LMG 5135]
gi|417957437|ref|ZP_12600359.1| hypothetical protein l13_07680 [Neisseria weaveri ATCC 51223]
gi|343968269|gb|EGV36500.1| hypothetical protein l13_07680 [Neisseria weaveri ATCC 51223]
gi|343969681|gb|EGV37890.1| hypothetical protein l11_08420 [Neisseria weaveri LMG 5135]
Length = 363
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L ++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAITREGKRAKSGDKDAQKLVALCEKLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL ++ L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA L
Sbjct: 181 FGLDAEELAMLRPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDEEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVTLGGEAKAKEAGKMRAEGKEYVVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|255066570|ref|ZP_05318425.1| GTP-binding protein YchF [Neisseria sicca ATCC 29256]
gi|255049154|gb|EET44618.1| GTP-binding protein YchF [Neisseria sicca ATCC 29256]
Length = 363
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASIEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|241759507|ref|ZP_04757611.1| GTP-binding protein YchF [Neisseria flavescens SK114]
gi|241320289|gb|EER56622.1| GTP-binding protein YchF [Neisseria flavescens SK114]
Length = 363
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ PIR
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYIVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|357405494|ref|YP_004917418.1| GTP-dependent nucleic acid-binding protein EngD [Methylomicrobium
alcaliphilum 20Z]
gi|351718159|emb|CCE23826.1| GTP-dependent nucleic acid-binding protein EngD [Methylomicrobium
alcaliphilum 20Z]
Length = 363
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 195/363 (53%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALTK +I+AENYPFCTI+PN+G++ VPD RL L IV
Sbjct: 1 MALYCGIVGLPNVGKSTLFNALTKAEIAAENYPFCTIDPNVGVVAVPDPRLDKLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P I+ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+I+
Sbjct: 61 QRVLPTTIEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDDNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D++ +E+ + + K N+ + +L+++ +LN P+R
Sbjct: 121 PIADIEVINTELALADMSTVERALQRAAKASKSGNKDELARKAVLEKVNEHLNTGEPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+++++ IK L LLT+KP +++ANV+++GF+NN +LD++K +A + ++ +CA +
Sbjct: 181 MDLSDDDMALIKDLCLLTVKPTMYIANVQDDGFENNPILDKVKAFADKEGAMVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI L+ +K+ FLD+LGL E LN ++RA + LLDL TYFT G KE+RAWTIP G T
Sbjct: 241 EAEIVQLDEDEKQEFLDDLGLDEPGLNRVVRAGYQLLDLSTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY+DF+ YKGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYEDFVTYKGEQGAKDAGKWRLEGKDYVVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|298370329|ref|ZP_06981645.1| GTP-binding protein YchF [Neisseria sp. oral taxon 014 str. F0314]
gi|340361741|ref|ZP_08684155.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria macacae
ATCC 33926]
gi|298281789|gb|EFI23278.1| GTP-binding protein YchF [Neisseria sp. oral taxon 014 str. F0314]
gi|339888161|gb|EGQ77637.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria macacae
ATCC 33926]
Length = 363
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|294668557|ref|ZP_06733654.1| GTP-binding protein YchF [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309520|gb|EFE50763.1| GTP-binding protein YchF [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 363
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIAREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYEDFVALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|333983628|ref|YP_004512838.1| GTP-binding protein YchF [Methylomonas methanica MC09]
gi|333807669|gb|AEG00339.1| GTP-binding protein YchF [Methylomonas methanica MC09]
Length = 363
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 277/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ VPD R++ L IVK
Sbjct: 1 MALHCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPVPDPRMEKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P I+ VDIAGLV+GASKGEGLGN+FL +IRET+ ++HV+RCF+DD + H++G+++
Sbjct: 61 ERILPTTIEFVDIAGLVAGASKGEGLGNQFLGNIRETDAIVHVVRCFEDDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+A +EK + K +K N+ + ++L+R++ +LN P+R
Sbjct: 121 PVSDIEVINTELALADMASVEKSLQKTSKAAKSGNKDEVARKQVLERVLEHLNLGEPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E+ IK L L+T+KP ++VANV+++GF NN +LD+++ +A + ++ +CA +
Sbjct: 181 LGLSEDEVKLIKELCLITLKPTLYVANVQDDGFDNNPMLDKVQAFAEQEGSKVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI L+ +K+ FLD+LGL E LN ++RA + LL+L TYFT G KE+RAWTIP T
Sbjct: 241 EAEIVQLDEAEKQEFLDDLGLDEPGLNRVVRAGYELLNLSTYFTAGVKEVRAWTIPVNAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY+DF+ YKGEQG K+AGK R EGK+Y V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYEDFVTYKGEQGAKDAGKWRLEGKEYKVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|419798586|ref|ZP_14323988.1| GTP-binding protein YchF [Neisseria sicca VK64]
gi|385694265|gb|EIG24877.1| GTP-binding protein YchF [Neisseria sicca VK64]
Length = 363
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAGKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429745224|ref|ZP_19278658.1| GTP-binding protein YchF [Neisseria sp. oral taxon 020 str. F0370]
gi|429161058|gb|EKY03498.1| GTP-binding protein YchF [Neisseria sp. oral taxon 020 str. F0370]
Length = 363
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIAREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYEDFVALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261379951|ref|ZP_05984524.1| GTP-binding protein YchF [Neisseria subflava NJ9703]
gi|284797149|gb|EFC52496.1| GTP-binding protein YchF [Neisseria subflava NJ9703]
Length = 363
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKTIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381153229|ref|ZP_09865098.1| GTP-binding protein YchF [Methylomicrobium album BG8]
gi|380885201|gb|EIC31078.1| GTP-binding protein YchF [Methylomicrobium album BG8]
Length = 363
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALT+ KI+AENYPFCTI+PN+G++ VPD R+ L IVK
Sbjct: 1 MALYCGIVGLPNVGKSTLFNALTRAKIAAENYPFCTIDPNVGVVPVPDGRMDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P I+ VDIAGLV+GASKGEGLGN+FL +IRET+ + HV+RCF D+ + H++G+++
Sbjct: 61 ERVLPTTIEFVDIAGLVAGASKGEGLGNQFLGNIRETDAIAHVVRCFHDENVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+A +EK + + K N+ + ++L++I +L+ P R
Sbjct: 121 PVSDIEVINTELALADMATVEKALTRAAKASKSGNKDELAKKEVLEKIYQHLDAGQPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+++E +K L LLTIKP +++ANV+++GF+NN LLD ++ +A + ++ ICA +
Sbjct: 181 MGLSDDEKAWVKELCLLTIKPTMYIANVQDDGFENNPLLDAVQAFAAQEGATVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L + +K+ FLD+LGL+E LN ++RA + LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 EAEIAQLEDEEKQEFLDDLGLEEPGLNRVVRAGYKLLNLATYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ YKGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYEDFIAYKGEQGAKDAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350572069|ref|ZP_08940378.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
wadsworthii 9715]
gi|349790657|gb|EGZ44560.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
wadsworthii 9715]
Length = 363
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L ++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAITREGKRAKSGDKDAQKLVTLCEKLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL ++ L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA L
Sbjct: 181 FGLDAEELAMLRPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDEEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVTLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385851930|ref|YP_005898445.1| GTP-binding protein EngD [Neisseria meningitidis M04-240196]
gi|416214599|ref|ZP_11622963.1| GTP-binding protein EngD [Neisseria meningitidis M01-240013]
gi|325143737|gb|EGC66054.1| GTP-binding protein EngD [Neisseria meningitidis M01-240013]
gi|325206753|gb|ADZ02206.1| GTP-binding protein EngD [Neisseria meningitidis M04-240196]
Length = 363
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEEDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261363931|ref|ZP_05976814.1| GTP-binding protein YchF [Neisseria mucosa ATCC 25996]
gi|288567945|gb|EFC89505.1| GTP-binding protein YchF [Neisseria mucosa ATCC 25996]
Length = 363
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261378446|ref|ZP_05983019.1| GTP-binding protein YchF [Neisseria cinerea ATCC 14685]
gi|269145230|gb|EEZ71648.1| GTP-binding protein YchF [Neisseria cinerea ATCC 14685]
Length = 363
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMVELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381400268|ref|ZP_09925245.1| GTP-binding protein YchF [Kingella kingae PYKK081]
gi|380834750|gb|EIC14578.1| GTP-binding protein YchF [Kingella kingae PYKK081]
Length = 363
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ +L++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAILREGKRAKSGDKDAQKLVAILEKLLPHLNEGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE+ IK L LLT KP ++V NV E+GF+NN L +L+ A +N P++ +CA L
Sbjct: 181 FGLDKEEMALIKPLFLLTAKPAMYVGNVAEDGFENNPHLARLQELAARENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++LN+ +K FL +GL E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELNDAEKVEFLAEMGLAEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFIALGGEAKAKEAGKMRAEGKEYVVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422111114|ref|ZP_16380875.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378315|emb|CBX23061.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 363
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|253997200|ref|YP_003049264.1| GTP-dependent nucleic acid-binding protein EngD [Methylotenera
mobilis JLW8]
gi|253983879|gb|ACT48737.1| GTP-binding protein YchF [Methylotenera mobilis JLW8]
Length = 361
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/361 (54%), Positives = 276/361 (76%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+TK I+AENYPFCTIEPN+GI+EVPD RL+ L +IVK ++
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRLQPLIDIVKPQR 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D + H++G+++P+
Sbjct: 61 VQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDAISHVVRCFDDGNVVHVAGKVDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D EVI TEL L+D+ +EK + +E+KK ++ +I L L +RI +L+ P+R +
Sbjct: 121 SDIEVINTELALADMETVEKTLQRESKKAKSGDKEAIALAGLCERIQKHLDTGAPVRTLG 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L+ +EL IK L L+T+KP++++ANV E GF+NN LD++ + P++ ICAK+E
Sbjct: 181 LDADELNIIKPLCLITVKPVMYIANVDEKGFENNPYLDKVVALGKAEGAPVVCICAKIEG 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
EIS+L++ DK FL LG E LN +IRA++ LL L+TYFT G +E+RAWT+ G TA
Sbjct: 241 EISELDDADKVEFLAELGQDEPGLNRVIRAAYDLLGLQTYFTAGVQEVRAWTVKKGATAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG+IHTD +RGFIRA I+Y +++ KGEQG K AGK+R EGK+Y+V+DGD+++F FN
Sbjct: 301 QAAGVIHTDFERGFIRAEVIAYDEYVKNKGEQGSKEAGKMRLEGKEYIVQDGDVMHFRFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|385337426|ref|YP_005891299.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis WUE 2594]
gi|433476262|ref|ZP_20433597.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
88050]
gi|433516331|ref|ZP_20473094.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2004090]
gi|433518274|ref|ZP_20475014.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
96023]
gi|433524770|ref|ZP_20481425.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97020]
gi|433527609|ref|ZP_20484221.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM3652]
gi|433531054|ref|ZP_20487636.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM3642]
gi|433531996|ref|ZP_20488563.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2007056]
gi|433535241|ref|ZP_20491773.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2001212]
gi|319409840|emb|CBY90149.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis WUE 2594]
gi|432208117|gb|ELK64096.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
88050]
gi|432251452|gb|ELL06819.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2004090]
gi|432252012|gb|ELL07372.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
96023]
gi|432257821|gb|ELL13114.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97020]
gi|432264636|gb|ELL19836.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM3642]
gi|432266509|gb|ELL21692.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM3652]
gi|432268641|gb|ELL23808.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2007056]
gi|432269873|gb|ELL25021.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2001212]
Length = 363
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|225077234|ref|ZP_03720433.1| hypothetical protein NEIFLAOT_02289 [Neisseria flavescens
NRL30031/H210]
gi|224951378|gb|EEG32587.1| hypothetical protein NEIFLAOT_02289 [Neisseria flavescens
NRL30031/H210]
Length = 363
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEELAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385329089|ref|YP_005883392.1| translation-associated GTPase [Neisseria meningitidis alpha710]
gi|418288983|ref|ZP_12901388.1| GTP-binding protein EngD [Neisseria meningitidis NM233]
gi|418291238|ref|ZP_12903272.1| GTP-binding protein EngD [Neisseria meningitidis NM220]
gi|308389941|gb|ADO32261.1| translation-associated GTPase [Neisseria meningitidis alpha710]
gi|372200202|gb|EHP14319.1| GTP-binding protein EngD [Neisseria meningitidis NM220]
gi|372200633|gb|EHP14680.1| GTP-binding protein EngD [Neisseria meningitidis NM233]
Length = 363
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|333375790|ref|ZP_08467590.1| GTP-dependent nucleic acid-binding protein EngD [Kingella kingae
ATCC 23330]
gi|332969578|gb|EGK08596.1| GTP-dependent nucleic acid-binding protein EngD [Kingella kingae
ATCC 23330]
Length = 363
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ +L++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAILREGKRAKSGDKDAQKLVAILEKLLPHLNEGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE+ IK L LLT KP ++V NV E+GF+NN L +L+ A +N P++ +CA L
Sbjct: 181 FGLDKEEMALIKPLFLLTAKPAMYVGNVAEDGFENNSHLARLQELAARENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +GL E LN LIRA + LL L+TYFT G KEIRAWTI G T
Sbjct: 241 ESEIAELDDAEKVEFLAEMGLAEPGLNRLIRAGYDLLGLQTYFTAGVKEIRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFIALGGEAKAKEAGKMRAEGKEYVVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|82701726|ref|YP_411292.1| GTP-dependent nucleic acid-binding protein EngD [Nitrosospira
multiformis ATCC 25196]
gi|82409791|gb|ABB73900.1| GTP-binding protein, HSR1-related protein [Nitrosospira multiformis
ATCC 25196]
Length = 367
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/367 (54%), Positives = 276/367 (75%), Gaps = 4/367 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ A+++ VDIAGLV+GASKGEGLGNKFLA IRET+ +I+++RCFK+D + H+SG+++
Sbjct: 61 QKVQSAVVEFVDIAGLVAGASKGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E IQTEL L+DLA +EK + +E K ++ +++ + LL+++ +L++ P+R
Sbjct: 121 PISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVKFVALLEKVREHLDQGKPVRS 180
Query: 181 M----SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIII 236
+ L+ E+ +K L LLT KP I+VANV E GF N LL +++ YA + P++ I
Sbjct: 181 LGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
CA LE EI+++ + DK+ FL ++ L+E LN L+RA++ LL L+TYFT G KE+RAWTI
Sbjct: 241 CAALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTIS 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
G TA QAA +IHTD ++GFIRA ISY DF+ KGEQG K AGK+R EGK+Y+V DGD+
Sbjct: 301 KGDTAPQAAAVIHTDFEKGFIRAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDV 360
Query: 357 LNFLFNI 363
++F FN+
Sbjct: 361 MHFRFNV 367
>gi|91787025|ref|YP_547977.1| GTP-dependent nucleic acid-binding protein EngD [Polaromonas sp.
JS666]
gi|91696250|gb|ABE43079.1| conserved hypothetical protein [Polaromonas sp. JS666]
Length = 363
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/362 (56%), Positives = 274/362 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ AI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ I+V+RCF+DD + H++G+++
Sbjct: 61 QKVQRAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DLA +EK + + K ++ S L+ +L++ LN++ P+R
Sbjct: 121 PISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESARLVAILEKCQAALNEAKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EE + L+T KP +FVANV E+GF+NN LD+LK YA Q P++ ICAK+
Sbjct: 181 LEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++D+ DKK FL +G E LN LI A++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++G+IRA TI+Y DF+ +KGEQG K+AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 GPQAAGVIHTDFEKGYIRAQTIAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFL 360
Query: 361 FN 362
F+
Sbjct: 361 FS 362
>gi|421543085|ref|ZP_15989184.1| putative GTP-binding protein [Neisseria meningitidis NM255]
gi|402315755|gb|EJU51313.1| putative GTP-binding protein [Neisseria meningitidis NM255]
Length = 363
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|296315350|ref|ZP_06865291.1| GTP-binding protein YchF [Neisseria polysaccharea ATCC 43768]
gi|296837700|gb|EFH21638.1| GTP-binding protein YchF [Neisseria polysaccharea ATCC 43768]
Length = 363
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERSMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261855771|ref|YP_003263054.1| GTP-binding protein YchF [Halothiobacillus neapolitanus c2]
gi|261836240|gb|ACX96007.1| GTP-binding protein YchF [Halothiobacillus neapolitanus c2]
Length = 364
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 273/364 (75%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AENYPFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKANIQAENYPFCTIEPNVGIVAMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET+ + V+RCF +D I H++G+++
Sbjct: 61 ERVLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETDAIAQVVRCFDNDDIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLK-NEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D ++I TEL+L+DL I+ + +D+ K N+ +I +L++I+ LN+ P+R
Sbjct: 121 PLSDIDIINTELVLADLDIVTRNLDRAIKASKSGVNKEAIARKAVLEKIMVGLNEVKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EEL I+ L LLT+KPI+++ANV E+GF NN L+ ++ +A +N P++ +CA
Sbjct: 181 ALGLSSEELAVIRDLQLLTVKPIMYIANVSEDGFTNNPYLEAVEAHAAKENAPVVPVCAT 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI L++ D+ FL +G E LN +IRA ++LL L+TYFT G KE+RAWTI G
Sbjct: 241 IEAEIMQLDDEDRDEFLSEIGQSEPGLNRVIRAGYALLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+LYKGEQG K AGK+R+EGK+Y+V+DGDILNF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFILYKGEQGAKEAGKMRAEGKEYIVKDGDILNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|416189052|ref|ZP_11615068.1| GTP-binding protein EngD [Neisseria meningitidis M0579]
gi|325135622|gb|EGC58239.1| GTP-binding protein EngD [Neisseria meningitidis M0579]
Length = 363
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMVELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254804334|ref|YP_003082555.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis alpha14]
gi|421538810|ref|ZP_15984982.1| GTP-binding protein EngD [Neisseria meningitidis 93003]
gi|254667876|emb|CBA03961.1| predicted GTPase translation factor [Neisseria meningitidis
alpha14]
gi|402315517|gb|EJU51080.1| GTP-binding protein EngD [Neisseria meningitidis 93003]
Length = 363
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15677674|ref|NP_274835.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis MC58]
gi|218767578|ref|YP_002342090.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis Z2491]
gi|385339416|ref|YP_005893288.1| GTP-binding protein EngD [Neisseria meningitidis G2136]
gi|385853894|ref|YP_005900408.1| GTP-binding protein EngD [Neisseria meningitidis H44/76]
gi|416198501|ref|ZP_11618977.1| GTP-binding protein EngD [Neisseria meningitidis CU385]
gi|421561864|ref|ZP_16007701.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM2657]
gi|427827764|ref|ZP_18994788.1| GTP-dependent nucleic acid-binding protein engD [Neisseria
meningitidis H44/76]
gi|433465819|ref|ZP_20423290.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM422]
gi|433467886|ref|ZP_20425335.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
87255]
gi|433480407|ref|ZP_20437689.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63041]
gi|433489004|ref|ZP_20446154.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M13255]
gi|433491192|ref|ZP_20448305.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM418]
gi|433505678|ref|ZP_20462611.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
9506]
gi|433507826|ref|ZP_20464724.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
9757]
gi|433512031|ref|ZP_20468846.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
4119]
gi|433514151|ref|ZP_20470935.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63049]
gi|433520574|ref|ZP_20477285.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
65014]
gi|433541756|ref|ZP_20498198.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63006]
gi|7227093|gb|AAF42173.1| putative GTP-binding protein [Neisseria meningitidis MC58]
gi|121051586|emb|CAM07884.1| hypothetical protein NMA0618 [Neisseria meningitidis Z2491]
gi|316984450|gb|EFV63423.1| GTP-dependent nucleic acid-binding protein engD [Neisseria
meningitidis H44/76]
gi|325139656|gb|EGC62195.1| GTP-binding protein EngD [Neisseria meningitidis CU385]
gi|325197660|gb|ADY93116.1| GTP-binding protein EngD [Neisseria meningitidis G2136]
gi|325200898|gb|ADY96353.1| GTP-binding protein EngD [Neisseria meningitidis H44/76]
gi|402336249|gb|EJU71510.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM2657]
gi|432200915|gb|ELK57003.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM422]
gi|432201438|gb|ELK57519.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
87255]
gi|432214178|gb|ELK70084.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63041]
gi|432221333|gb|ELK77144.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M13255]
gi|432225751|gb|ELK81491.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM418]
gi|432239380|gb|ELK94934.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
9757]
gi|432239565|gb|ELK95117.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
9506]
gi|432245577|gb|ELL01045.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
4119]
gi|432246038|gb|ELL01500.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63049]
gi|432251911|gb|ELL07272.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
65014]
gi|432275708|gb|ELL30776.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
63006]
Length = 363
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254673163|emb|CBA08008.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 363
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+G++EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGVVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N PI+ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPIVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416207687|ref|ZP_11620993.1| GTP-binding protein EngD [Neisseria meningitidis 961-5945]
gi|325141641|gb|EGC64103.1| GTP-binding protein EngD [Neisseria meningitidis 961-5945]
Length = 363
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|389606536|emb|CCA45449.1| GTP-dependent nucleic acid-binding protein engD [Neisseria
meningitidis alpha522]
Length = 363
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385341311|ref|YP_005895182.1| GTP-binding protein EngD [Neisseria meningitidis M01-240149]
gi|385856607|ref|YP_005903119.1| GTP-binding protein EngD [Neisseria meningitidis NZ-05/33]
gi|325201517|gb|ADY96971.1| GTP-binding protein EngD [Neisseria meningitidis M01-240149]
gi|325207496|gb|ADZ02948.1| GTP-binding protein EngD [Neisseria meningitidis NZ-05/33]
Length = 363
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYEDFIALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|161869377|ref|YP_001598544.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis 053442]
gi|161594930|gb|ABX72590.1| GTP-binding protein, putative [Neisseria meningitidis 053442]
Length = 363
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|59800527|ref|YP_207239.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
gonorrhoeae FA 1090]
gi|194097672|ref|YP_002000712.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
gonorrhoeae NCCP11945]
gi|240013377|ref|ZP_04720290.1| translation-associated GTPase [Neisseria gonorrhoeae DGI18]
gi|240015820|ref|ZP_04722360.1| translation-associated GTPase [Neisseria gonorrhoeae FA6140]
gi|240120449|ref|ZP_04733411.1| translation-associated GTPase [Neisseria gonorrhoeae PID24-1]
gi|254492971|ref|ZP_05106142.1| translation-associated GTPase [Neisseria gonorrhoeae 1291]
gi|268594048|ref|ZP_06128215.1| translation-associated GTPase [Neisseria gonorrhoeae 35/02]
gi|268596097|ref|ZP_06130264.1| translation-associated GTPase [Neisseria gonorrhoeae FA19]
gi|268598223|ref|ZP_06132390.1| translation-associated GTPase [Neisseria gonorrhoeae MS11]
gi|268600569|ref|ZP_06134736.1| translation-associated GTPase [Neisseria gonorrhoeae PID18]
gi|268602887|ref|ZP_06137054.1| translation-associated GTPase [Neisseria gonorrhoeae PID1]
gi|268681351|ref|ZP_06148213.1| translation-associated GTPase [Neisseria gonorrhoeae PID332]
gi|268683521|ref|ZP_06150383.1| translation-associated GTPase [Neisseria gonorrhoeae SK-92-679]
gi|291044621|ref|ZP_06570330.1| translation-associated GTPase [Neisseria gonorrhoeae DGI2]
gi|293397740|ref|ZP_06641946.1| GTP-binding protein YchF [Neisseria gonorrhoeae F62]
gi|385334939|ref|YP_005888886.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
gonorrhoeae TCDC-NG08107]
gi|59717422|gb|AAW88827.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090]
gi|193932962|gb|ACF28786.1| putative GTP-binding protein [Neisseria gonorrhoeae NCCP11945]
gi|226512011|gb|EEH61356.1| translation-associated GTPase [Neisseria gonorrhoeae 1291]
gi|268547437|gb|EEZ42855.1| translation-associated GTPase [Neisseria gonorrhoeae 35/02]
gi|268549885|gb|EEZ44904.1| translation-associated GTPase [Neisseria gonorrhoeae FA19]
gi|268582354|gb|EEZ47030.1| translation-associated GTPase [Neisseria gonorrhoeae MS11]
gi|268584700|gb|EEZ49376.1| translation-associated GTPase [Neisseria gonorrhoeae PID18]
gi|268587018|gb|EEZ51694.1| translation-associated GTPase [Neisseria gonorrhoeae PID1]
gi|268621635|gb|EEZ54035.1| translation-associated GTPase [Neisseria gonorrhoeae PID332]
gi|268623805|gb|EEZ56205.1| translation-associated GTPase [Neisseria gonorrhoeae SK-92-679]
gi|291011515|gb|EFE03511.1| translation-associated GTPase [Neisseria gonorrhoeae DGI2]
gi|291611686|gb|EFF40755.1| GTP-binding protein YchF [Neisseria gonorrhoeae F62]
gi|317163482|gb|ADV07023.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 363
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNRFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERALLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|268685828|ref|ZP_06152690.1| translation-associated GTPase [Neisseria gonorrhoeae SK-93-1035]
gi|268626112|gb|EEZ58512.1| translation-associated GTPase [Neisseria gonorrhoeae SK-93-1035]
Length = 363
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERALLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|451936229|ref|YP_007460083.1| GTP-binding protein YchF [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777152|gb|AGF48127.1| GTP-binding protein YchF [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 357
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/363 (56%), Positives = 284/363 (78%), Gaps = 6/363 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG+IGLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL +L NI
Sbjct: 1 MALQCGIIGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLVNLANIANP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI + + VDIAGLVSGAS+GEGLGN+FL+HIRET+ +++V+RCF D I H SG ++
Sbjct: 61 EKIIYSTAEFVDIAGLVSGASQGEGLGNQFLSHIRETDAILNVVRCFDDPNIIHYSGYVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI++ EVI+TELIL+DL +EK I K K N ++ + LL R + +LN + +R
Sbjct: 121 PINEIEVIETELILADLNTIEKIISKNQK-----NSSNVPI-HLLNRCLEHLNDNKSLRD 174
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SL+ ++ ++ + LT+KPI+++ NV E+GF NN LLD+LK ++ +++IP++ ICA +
Sbjct: 175 LSLSIDDWALLRNFSFLTVKPIMYIGNVSEDGFVNNPLLDKLKNFSLSRDIPMVTICASV 234
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E++I+D++ D+K FL+++GLKE L+ LIRA+FSLL L+TYFTVG KE+RAWTIP G+T
Sbjct: 235 EQDIADMSEEDRKIFLEDMGLKEPGLDRLIRAAFSLLGLQTYFTVGSKEVRAWTIPVGST 294
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA TISY+DF+ Y GE + AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 295 ASKAAGVIHTDFEKGFIRAQTISYEDFIKYNGEIKAREAGKVRSEGKDYVVKDGDIMNFL 354
Query: 361 FNI 363
FN+
Sbjct: 355 FNV 357
>gi|416174189|ref|ZP_11609150.1| GTP-binding protein EngD [Neisseria meningitidis OX99.30304]
gi|325129577|gb|EGC52401.1| GTP-binding protein EngD [Neisseria meningitidis OX99.30304]
Length = 363
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421547208|ref|ZP_15993246.1| GTP-binding protein EngD [Neisseria meningitidis NM183]
gi|421553413|ref|ZP_15999375.1| GTP-binding protein EngD [Neisseria meningitidis NM576]
gi|421563930|ref|ZP_16009742.1| GTP-binding protein EngD [Neisseria meningitidis NM2795]
gi|421906272|ref|ZP_16336173.1| putative GTP-binding protein YLF2 [Neisseria meningitidis alpha704]
gi|393292619|emb|CCI72092.1| putative GTP-binding protein YLF2 [Neisseria meningitidis alpha704]
gi|402321571|gb|EJU57044.1| GTP-binding protein EngD [Neisseria meningitidis NM183]
gi|402328090|gb|EJU63470.1| GTP-binding protein EngD [Neisseria meningitidis NM576]
gi|402339549|gb|EJU74763.1| GTP-binding protein EngD [Neisseria meningitidis NM2795]
Length = 363
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELVAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429463186|ref|YP_007184649.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811242|ref|YP_007447697.1| GTP-dependent nucleic acid-binding protein [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338700|gb|AFZ83123.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776400|gb|AGF47399.1| GTP-dependent nucleic acid-binding protein [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 363
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/364 (57%), Positives = 278/364 (76%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPNIGI+EVPD RL +L I K
Sbjct: 1 MALRCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNIGIVEVPDNRLHNLAEIAKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI A + VDIAGLV+GAS GEGLGNKFL+HIRET+ +I+V+RCF++ I H G+++
Sbjct: 61 EKIISATAEFVDIAGLVAGASSGEGLGNKFLSHIRETDAIINVVRCFENPDIIHYEGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PIHD EVI+TELILSDL+ ++K + K N K + ++ +I ++ +LK + +LN +R
Sbjct: 121 PIHDIEVIETELILSDLSTVDKSLSKYN-KLSVNDKSNIAIVNVLKLCLSHLNNGKSLRT 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF-KNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+ EE IK + LT KPI++VANV E GF + N LL + YA + NIP++ ICA
Sbjct: 180 LQLSEEEQEIIKRFDFLTYKPIMYVANVDEKGFLEKNSLLTAVINYAADNNIPVVSICAS 239
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE+EI DL+ DKK FL +LG++E L+ L+R++F LL L+TYFTVG KE+ AWTIP G
Sbjct: 240 LEQEIGDLSLEDKKIFLQDLGVEEAGLDRLVRSAFLLLGLQTYFTVGVKEVHAWTIPIGA 299
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD ++GFIRA TISY+DF+ ++GE K AGK+RSEGK Y+V+DGDI+NF
Sbjct: 300 TAPQAAGVIHTDFEKGFIRAQTISYEDFVAFRGELKAKEAGKMRSEGKDYIVQDGDIINF 359
Query: 360 LFNI 363
LFN+
Sbjct: 360 LFNV 363
>gi|433501499|ref|ZP_20458480.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM174]
gi|432233340|gb|ELK88968.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM174]
Length = 363
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE IK L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMIKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385324797|ref|YP_005879236.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis 8013]
gi|385855857|ref|YP_005902370.1| GTP-binding protein EngD [Neisseria meningitidis M01-240355]
gi|416184788|ref|ZP_11613105.1| GTP-binding protein EngD [Neisseria meningitidis M13399]
gi|421555558|ref|ZP_16001488.1| putative GTP-binding protein [Neisseria meningitidis 98008]
gi|433469969|ref|ZP_20427377.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
98080]
gi|433522843|ref|ZP_20479522.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
61103]
gi|254671615|emb|CBA09307.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|261393184|emb|CAX50802.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis 8013]
gi|325133488|gb|EGC56151.1| GTP-binding protein EngD [Neisseria meningitidis M13399]
gi|325204798|gb|ADZ00252.1| GTP-binding protein EngD [Neisseria meningitidis M01-240355]
gi|402329795|gb|EJU65149.1| putative GTP-binding protein [Neisseria meningitidis 98008]
gi|432201562|gb|ELK57642.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
98080]
gi|432257358|gb|ELL12661.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
61103]
Length = 363
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421545159|ref|ZP_15991223.1| putative GTP-binding protein [Neisseria meningitidis NM140]
gi|421548179|ref|ZP_15994207.1| putative GTP-binding protein [Neisseria meningitidis NM2781]
gi|402321236|gb|EJU56711.1| putative GTP-binding protein [Neisseria meningitidis NM140]
gi|402326901|gb|EJU62299.1| putative GTP-binding protein [Neisseria meningitidis NM2781]
Length = 363
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMVELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERSMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421541140|ref|ZP_15987270.1| putative GTP-binding protein [Neisseria meningitidis 93004]
gi|402315933|gb|EJU51487.1| putative GTP-binding protein [Neisseria meningitidis 93004]
Length = 363
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPHLDHLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421568334|ref|ZP_16014060.1| GTP-binding protein EngD [Neisseria meningitidis NM3001]
gi|402342062|gb|EJU77233.1| GTP-binding protein EngD [Neisseria meningitidis NM3001]
Length = 363
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421557831|ref|ZP_16003728.1| putative GTP-binding protein [Neisseria meningitidis 80179]
gi|402333550|gb|EJU68852.1| putative GTP-binding protein [Neisseria meningitidis 80179]
Length = 363
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRTRSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD+LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|121634245|ref|YP_974490.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
meningitidis FAM18]
gi|304388374|ref|ZP_07370485.1| GTP-binding protein YchF [Neisseria meningitidis ATCC 13091]
gi|416164307|ref|ZP_11607187.1| GTP-binding protein EngD [Neisseria meningitidis N1568]
gi|416179622|ref|ZP_11611058.1| GTP-binding protein EngD [Neisseria meningitidis M6190]
gi|416193252|ref|ZP_11617091.1| GTP-binding protein EngD [Neisseria meningitidis ES14902]
gi|421551479|ref|ZP_15997470.1| GTP-binding protein EngD [Neisseria meningitidis 69166]
gi|421559830|ref|ZP_16005698.1| GTP-binding protein EngD [Neisseria meningitidis 92045]
gi|433472239|ref|ZP_20429617.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
68094]
gi|433474162|ref|ZP_20431517.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97021]
gi|433478392|ref|ZP_20435701.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
70012]
gi|433481532|ref|ZP_20438799.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2006087]
gi|433484593|ref|ZP_20441812.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2002038]
gi|433485521|ref|ZP_20442724.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97014]
gi|433493195|ref|ZP_20450281.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM586]
gi|433495311|ref|ZP_20452372.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM762]
gi|433497444|ref|ZP_20454472.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M7089]
gi|433497999|ref|ZP_20455015.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M7124]
gi|433503575|ref|ZP_20460531.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM126]
gi|433510030|ref|ZP_20466887.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
12888]
gi|433526928|ref|ZP_20483550.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
69096]
gi|433537330|ref|ZP_20493826.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
77221]
gi|433539576|ref|ZP_20496043.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
70030]
gi|120865951|emb|CAM09688.1| hypothetical protein NMC0379 [Neisseria meningitidis FAM18]
gi|304337640|gb|EFM03798.1| GTP-binding protein YchF [Neisseria meningitidis ATCC 13091]
gi|325127542|gb|EGC50466.1| GTP-binding protein EngD [Neisseria meningitidis N1568]
gi|325131484|gb|EGC54191.1| GTP-binding protein EngD [Neisseria meningitidis M6190]
gi|325137530|gb|EGC60112.1| GTP-binding protein EngD [Neisseria meningitidis ES14902]
gi|402327356|gb|EJU62746.1| GTP-binding protein EngD [Neisseria meningitidis 69166]
gi|402334596|gb|EJU69880.1| GTP-binding protein EngD [Neisseria meningitidis 92045]
gi|432206865|gb|ELK62866.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
68094]
gi|432207915|gb|ELK63901.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97021]
gi|432213286|gb|ELK69208.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
70012]
gi|432218289|gb|ELK74152.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2006087]
gi|432219679|gb|ELK75515.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
2002038]
gi|432224010|gb|ELK79783.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
97014]
gi|432226798|gb|ELK82521.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM586]
gi|432227943|gb|ELK83645.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM762]
gi|432232218|gb|ELK87868.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M7089]
gi|432236766|gb|ELK92370.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
M7124]
gi|432239045|gb|ELK94605.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
NM126]
gi|432244968|gb|ELL00447.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
12888]
gi|432258981|gb|ELL14261.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
69096]
gi|432271596|gb|ELL26719.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
70030]
gi|432271753|gb|ELL26875.1| 50S ribosome-binding GTPase family protein [Neisseria meningitidis
77221]
Length = 363
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|89900370|ref|YP_522841.1| GTP-dependent nucleic acid-binding protein EngD [Rhodoferax
ferrireducens T118]
gi|89345107|gb|ABD69310.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
Length = 361
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 278/360 (77%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RL L+ IVK ++
Sbjct: 1 MKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLDALSAIVKPQR 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ AI++ VDIAGLV+GAS GEGLGNKFLAHIRET+ +I+V+RCF+D + H++G+++PI
Sbjct: 61 VQRAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDAIINVVRCFEDANVIHVAGKVDPI 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D EVIQTEL L+DL +EK + + K ++ SI+L+ +L++ LN++ P+R +
Sbjct: 121 SDMEVIQTELCLADLQAVEKALHRVTKVARSGDKESIKLVAILEKCQAALNEAKPVRTLD 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
+ EEL +K L+T KP +FVANV E+GF+NN LD+L YA QN P++ ICAK+E
Sbjct: 181 FSKEELPLLKQFFLITAKPAMFVANVAEDGFENNPYLDRLTAYATAQNAPVVAICAKMEA 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
E++D+ DKK FL +G E LN L+ A++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EMADMEEEDKKMFLAEIGQTEPGLNRLVVAAYKLLGLQTYFTAGVKEVRAWTIHVGDTGP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG+IHTD ++G+IRA TI+Y+DF+ +KGEQG K+AGK+RSEGK+Y+V+DGD++NFLF+
Sbjct: 301 QAAGVIHTDFEKGYIRAQTIAYEDFIAFKGEQGAKDAGKMRSEGKEYVVKDGDLMNFLFS 360
>gi|192362469|ref|YP_001981162.1| GTP-binding protein YchF [Cellvibrio japonicus Ueda107]
gi|190688634|gb|ACE86312.1| GTP-binding protein YchF [Cellvibrio japonicus Ueda107]
Length = 363
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT ISAEN+PFCTIEPN GI+ VPD R L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTNAGISAENFPFCTIEPNAGIVVVPDPRQDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ +N
Sbjct: 61 ERIVPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVANGVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK +++ K +++H++ + LL++I +L+++ P+R
Sbjct: 121 PAADIEVINTELALADLEAVEKALNRYAKAAKGQDKHALAMKALLEKIQPHLDQAKPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+ EE +K +NLLT+KP +++ANV E+GF+NN LD ++ A +N ++ IC KL
Sbjct: 181 FALSTEEKTLLKEINLLTLKPTMYIANVAEDGFENNPHLDVVRNIAAEENSVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L DKK FL +G++E LN +IRA + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEGDDKKEFLAEMGMEEPGLNRVIRAGYQLLGLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA TI+Y+DF+ YKGEQG KNAGK R EGK+Y+V+DGD+L+FL
Sbjct: 301 APQAAGVIHTDFEKGFIRAETIAYEDFVQYKGEQGAKNAGKARKEGKEYIVKDGDVLHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421566169|ref|ZP_16011926.1| GTP-binding protein EngD [Neisseria meningitidis NM3081]
gi|402340886|gb|EJU76075.1| GTP-binding protein EngD [Neisseria meningitidis NM3081]
Length = 363
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+G++EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGVVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|313669061|ref|YP_004049345.1| hypothetical protein NLA_17840 [Neisseria lactamica 020-06]
gi|313006523|emb|CBN87987.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 363
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L++L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN L++LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLERLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|119897043|ref|YP_932256.1| GTP-dependent nucleic acid-binding protein EngD [Azoarcus sp. BH72]
gi|119669456|emb|CAL93369.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 363
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD RL L+ IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ ++HV+RCF DD + H+SG ++
Sbjct: 61 QKIQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADDNVVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+D+A +EK +++ + ++ + L+ +L++ L+ P+R
Sbjct: 121 PIRDIEVIDTELALADMATVEKALNRYKRPAAAGDKDAKVLVAVLEKCFAQLDTGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL SIK L+T KP+++ ANV E+GF+NN LD ++ +A + ++ +CA +
Sbjct: 181 LDLSREELASIKQFCLITQKPVLYAANVAEDGFENNPHLDAVRAHAAAEGAEVVALCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL++ DKK FL+++GL+E L+ LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIADLDDADKKDFLESMGLEEPGLDRLIRAGYKLLGLQTYFTAGVKEVRAWTIHVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFDDFIAFKGEAGAKEAGKMRAEGKDYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|91775028|ref|YP_544784.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacillus
flagellatus KT]
gi|91709015|gb|ABE48943.1| conserved hypothetical protein [Methylobacillus flagellatus KT]
Length = 361
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/361 (53%), Positives = 276/361 (76%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+T+ I A NYPFCTIEPN+GI+EVPD RLK L IV +K
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITRAGIEAANYPFCTIEPNVGIVEVPDPRLKPLIEIVNPQK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ PAI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D I H++G+++P+
Sbjct: 61 VQPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDGNIVHVAGKVDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E I TEL L+D+ +EK + +E+KK ++ +I L +L+++ +L++ P+R +
Sbjct: 121 ADVETINTELALADMETVEKTLQRESKKAKSGDKEAIALCAVLEKVQQHLDQGHPVRTLG 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L+ ++L IK L L+T+KP++++ANV E GF NN LL+++ ++ P++ ICAK+E
Sbjct: 181 LDEDQLKLIKPLCLITVKPVMYLANVDEEGFDNNPLLEKVLELGKKESAPVVAICAKIES 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
EI+DL + DK FL LGL+E L+ +IRA++ LL L+TYFT G KE+RAWTI G+TA
Sbjct: 241 EIADLEDEDKAMFLAELGLEEPGLDRVIRAAYDLLGLQTYFTAGVKEVRAWTIRKGSTAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG+IHTD +RGFIRA I+Y +++ +KGE+G + AGK+R EGK Y+V+DGDI++F FN
Sbjct: 301 QAAGVIHTDFERGFIRAEVIAYDEYVKHKGEKGAQEAGKMRLEGKDYIVQDGDIMHFRFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|261401572|ref|ZP_05987697.1| GTP-binding protein YchF [Neisseria lactamica ATCC 23970]
gi|269208342|gb|EEZ74797.1| GTP-binding protein YchF [Neisseria lactamica ATCC 23970]
Length = 363
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L K+++ +L++ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K L LLT KP ++V NV E+GF+NN LD LK A +N P++ +CA +
Sbjct: 181 FGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDLLKELAAKENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|451822819|ref|YP_007459093.1| putative GTPase, translation factor [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775619|gb|AGF46660.1| putative GTPase, translation factor [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 362
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/363 (58%), Positives = 274/363 (75%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPNIGI+EVPD RL L IVK
Sbjct: 1 MALRCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNIGIVEVPDDRLDILAGIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A + VDIAGLV+GAS GEGLGNKFL+HIRET+ +I+V+RCF D + H G+I+
Sbjct: 61 ERVVHATAEFVDIAGLVAGASSGEGLGNKFLSHIRETDAIINVVRCFADSNVIHYEGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI+D EVI+TELIL+DL EK + K K + I ++ LL+ I+ +L+ + P+R
Sbjct: 121 PINDIEVIETELILADLNTAEKALAKYTKLISSDKSNQI-VVNLLQSILSHLDGNKPLRS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EE IK + LT KPI++VANV +NGF NN LL++++ YA NIP++ ICA L
Sbjct: 180 LEFSLEEKDLIKRFSFLTYKPIMYVANVDDNGFVNNSLLNKVEDYAKRNNIPMVAICASL 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EI+DL+ DKK FL +LG +E LN LIR++FSLL L+TYFTVG KE+RAWTIP G T
Sbjct: 240 EQEIADLSIEDKKIFLQDLGFEEIGLNRLIRSAFSLLGLQTYFTVGVKEVRAWTIPIGVT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIR+ TI+YKDF+ E K AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 300 APKAAAVIHTDFERGFIRSQTIAYKDFVDLGSESKAKEAGKMRSEGKDYIVQDGDIMNFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|422348786|ref|ZP_16429678.1| GTP-dependent nucleic acid-binding protein engD [Sutterella
wadsworthensis 2_1_59BFAA]
gi|404658838|gb|EKB31700.1| GTP-dependent nucleic acid-binding protein engD [Sutterella
wadsworthensis 2_1_59BFAA]
Length = 364
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/364 (53%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKST+FNALTK I+AENYPFCTIEPN+G++EVPD RLK L+ IV
Sbjct: 1 MGLKCGIVGLPNVGKSTIFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKALSEIVHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + H++RCF DD I H+SG+++
Sbjct: 61 ERVVPAAVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFTDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D VI TEL L+DL +EK + + +K+ + +++L+ +L++++ LN+ R
Sbjct: 121 PLDDINVINTELALADLQTVEKALTRYSKQARSGGDKEALKLVLVLEKLLPALNEGRAAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE+ ++ L LLTIKP ++VANV+++GF+NN LLD ++ +A +++ P++ +CAK
Sbjct: 181 SVKLTPEEIAVVRPLFLLTIKPTMYVANVEDHGFENNPLLDAVREFAASEHSPVVAVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E +I+DL++ DK+ FL ++G+ E L+ +IRA + LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEADIADLDDEDKEMFLADMGMTEPGLDRVIRAGYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y+DF+ +KGE+G + AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYEDFIAFKGEKGAQEAGKMRAEGKDYIVQDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|394990506|ref|ZP_10383338.1| GTP-binding protein YchF [Sulfuricella denitrificans skB26]
gi|393790771|dbj|GAB72977.1| GTP-binding protein YchF [Sulfuricella denitrificans skB26]
Length = 363
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNA+T I+AENYPFCTIEPN+GI+EVPD R+ L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNAITSAGIAAENYPFCTIEPNVGIVEVPDPRIDALTVIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ AI++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++ + H++G+I+
Sbjct: 61 QKVQHAIMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFENVDVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+DL +EK + + NK ++ ++ ++ LL+++ L++ P R
Sbjct: 121 PISDIEVINTELALADLETVEKAVLRTNKLAKSGDKDAVRMMALLEKVRATLDQGQPARN 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++ + EE +K L L+T+KP +++ANV E GF NN LD++ A + P++ ICA +
Sbjct: 181 LNPDKEEAALLKPLCLMTMKPTMYIANVDEAGFTNNPHLDKVAELAAREGSPVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ DKK FL ++GL+E LN +IRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EGEIADLDEADKKEFLADMGLEEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y+DF+ GE G K AGK+RSEGK+Y+V DGD++NFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFVACNGEHGAKEAGKMRSEGKEYVVHDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|424778474|ref|ZP_18205422.1| GTP-binding protein YchF [Alcaligenes sp. HPC1271]
gi|422886624|gb|EKU29038.1| GTP-binding protein YchF [Alcaligenes sp. HPC1271]
Length = 363
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD+RL+ L IV
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLQDLAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +HV+RCF DD + H++G+++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDATVHVVRCFADDNVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL L+DL ++EK + + K ++ + +L+ LL+RI L + +R
Sbjct: 121 PLADIEIINTELALADLGVVEKAVHRNQKLARSGDKDAAKLVALLERIEKALGEGKSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL IK +T KP ++VANVKE+GF NN L+ ++ YA P++ +CA +
Sbjct: 181 LKLDEDELHQIKSYGFITAKPTMYVANVKEDGFTNNPHLEAVQNYAAADGAPVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +LG++E LN +IRA++SLL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELDDADKIEFLSDLGMEEPGLNRVIRAAYSLLGLQTYFTAGVKEVRAWTIRVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFDDFVACKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|388259159|ref|ZP_10136333.1| putative GTP-binding protein [Cellvibrio sp. BR]
gi|387937117|gb|EIK43674.1| putative GTP-binding protein [Cellvibrio sp. BR]
Length = 363
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT ISAEN+PFCTIEPN GI+ VPD R L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTNAGISAENFPFCTIEPNAGIVVVPDPRQDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ +DIAG+V+GASKGEGLGNKFLA+IRET+ + HV+RCF DD + H++ +N
Sbjct: 61 ERIVPTTMEFIDIAGIVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDDNVIHVANGVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL ++K I++ K ++H++ + LL+++ +LN++ P+R
Sbjct: 121 PAADIEVINTELALADLEAVDKAINRYAKSAKGGDKHAMAIKALLEKVQPHLNEAKPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE+ +K +NLLT+KP +++ANV ENGF+NN LD ++ A + ++ IC KL
Sbjct: 181 FPLDKEEVAMLKEINLLTLKPTMYIANVAENGFENNPHLDVVRKIAEEEKSVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L DKK FL +G++E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEGDDKKEFLAEMGMEEPGLNRVIRAGYQLLGLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA TI+Y+DF+ YKGEQG KNAGK R EGK+Y+V+DGD+L+FL
Sbjct: 301 APQAAGVIHTDFEKGFIRAETIAYEDFVQYKGEQGAKNAGKSRKEGKEYVVKDGDVLHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|329118941|ref|ZP_08247636.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464969|gb|EGF11259.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
bacilliformis ATCC BAA-1200]
Length = 363
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF D+ I H++G+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDENIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ LL+ ++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREGKRAKSGDKDAQKLVALLESLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ E+ ++ L LLT+KP ++VANV E+GF NN L +L+ A +N P++ +CA +
Sbjct: 181 FGLDAEQTALLRPLFLLTVKPAMYVANVAEDGFDNNPHLARLQELAAKENAPVVALCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN L+RA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDEEKAEFLAEMGLEEPGLNRLVRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ GE K AGK+R EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYEDFVALGGEAKAKEAGKMRVEGKEYVVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|319940805|ref|ZP_08015144.1| GTP-binding protein YchF [Sutterella wadsworthensis 3_1_45B]
gi|319805687|gb|EFW02468.1| GTP-binding protein YchF [Sutterella wadsworthensis 3_1_45B]
Length = 364
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 288/364 (79%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKST+FNALTK I+AENYPFCTIEPN+GI+EVPD RL+ L+ IVK
Sbjct: 1 MGLKCGIVGLPNVGKSTIFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLQKLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FLA+IRE + + H++RCF DD + H++GE+N
Sbjct: 61 ERIVPAAVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNVVHVAGEVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P++D VI TEL L+DLA +EK +++ K+ + +++L+ +L++++ LN+ +P R
Sbjct: 121 PLNDIAVINTELALADLATVEKALNRYAKQARSGGDKEAMKLVLVLEKLLPVLNEGMPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ LN +E I+ L LLT+KP ++VANV+++GF NN LLD ++ +A ++ P++ +CAK
Sbjct: 181 SVKLNEDEQKVIRQLFLLTMKPTMYVANVEDHGFTNNPLLDAVREFAAKEHAPVVAVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E +I+DL++ DK+ FL+++G+ E LN +IRA++ LL L+TYFT G KE+RAWTI G
Sbjct: 241 TEADIADLDDADKEMFLEDMGMSEPGLNRVIRAAYDLLGLQTYFTAGVKEVRAWTIHKGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA TI+Y DF+ ++GE+G + AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGVIHTDFERGFIRAQTIAYDDFIAHRGEKGAQEAGKMRAEGKDYIVQDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|404379701|ref|ZP_10984755.1| GTP-binding protein YchF [Simonsiella muelleri ATCC 29453]
gi|294483084|gb|EFG30771.1| GTP-binding protein YchF [Simonsiella muelleri ATCC 29453]
Length = 363
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 278/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G ++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E+K+ ++ + +L+ +L++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAILRESKRAKAGDKDAQKLVVILEKLLPHLNEGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++++L +K L LLT KP ++VANV E+GF+NN D+LK A +N P++ +CA +
Sbjct: 181 FGLDSDDLALLKPLFLLTAKPAMYVANVAEDGFENNPHYDRLKELAARENAPVVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELDDDEKAEFLAEMGLQELGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYNDFIALGGESKAKEAGKMRAEGKEYVVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|53803664|ref|YP_114464.1| GTP-dependent nucleic acid-binding protein EngD [Methylococcus
capsulatus str. Bath]
gi|53757425|gb|AAU91716.1| GTP-binding protein YchF [Methylococcus capsulatus str. Bath]
Length = 363
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ VPD RL+ L IVK
Sbjct: 1 MALHVGIVGLPNVGKSTLFNALTKAAIAAENYPFCTIDPNVGVVPVPDPRLEVLAGIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P I+ VDIAGLV+GASKGEGLGN+FLAHIRET+ + HV+RCF++D I H++G+++
Sbjct: 61 ERVVPTAIEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIAHVVRCFENDDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI ELIL+D+A +EK + + K N+ IE +++L+ + LN P+R
Sbjct: 121 PLSDIEVIGVELILADMATVEKALQRAQKAAKSGNKEEIERVRVLELVSKGLNSGTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ ++ L+LLT KP +++ANV+E GF NN LL+Q++ +A N+ ++ +CA
Sbjct: 181 IPLPPEDAALLRELHLLTAKPTMYIANVQEGGFDNNPLLEQVEAFARNEGAVVVPVCAAF 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S L + DK FL +G +E LN ++RA++ LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSQLEDEDKADFLAEIGFEEPGLNRVVRAAYRLLNLFTYFTAGVKEVRAWTIPAGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D ++GFIRA I+Y+DF+ +GEQG K+AGK R EGK Y++ DGDI++F
Sbjct: 301 APQAAGVIHSDFEKGFIRAEVIAYEDFVACQGEQGAKDAGKWRLEGKDYVMRDGDIVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|344942993|ref|ZP_08782280.1| GTP-binding protein YchF [Methylobacter tundripaludum SV96]
gi|344260280|gb|EGW20552.1| GTP-binding protein YchF [Methylobacter tundripaludum SV96]
Length = 363
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALT+ KI+AENYPFCTI+PN+G++ VPD R+ L IVK
Sbjct: 1 MALYCGIVGLPNVGKSTLFNALTRAKIAAENYPFCTIDPNVGVVPVPDSRMDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P I+ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++G+I+
Sbjct: 61 ERMLPTTIEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFQDDNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+A +EK + + +K N+ +L+++ L+ P R
Sbjct: 121 PLSDIEVINTELALADMASVEKALLRASKAARTGNKDEQAKKDVLEKVFKQLDSGEPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E I+ L L+T+KP +++ANV+++GF+NN LLD+++ A + ++ ICA +
Sbjct: 181 LPLTEDEKALIRDLCLMTLKPAMYIANVQDDGFENNPLLDKVQALAEKEGAMVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ +KK FLD+LGL+E LN ++RA + LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 EAEIAQLDEEEKKEFLDDLGLEEPGLNRVVRAGYKLLNLATYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D ++GFIRA I+Y+DF+ YKGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHSDFEKGFIRAEVIAYQDFIDYKGEQGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|295677800|ref|YP_003606324.1| GTP-binding protein YchF [Burkholderia sp. CCGE1002]
gi|295437643|gb|ADG16813.1| GTP-binding protein YchF [Burkholderia sp. CCGE1002]
Length = 364
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 280/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK ISAENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGISAENYPFCTIEPNVGIVEVPDTRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++ +++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ +++ +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAVKNAAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L++EE ++K L+T KP ++VANVKE+GF+NN LD + +A + P++ +CA
Sbjct: 181 ALDLSDEEKATLKPFCLITAKPTMYVANVKEDGFENNPHLDAVMKFAAAEGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I+DL+ D + FL ++G++E LN +IRA + LL L TYFT G KE+RAWTI G
Sbjct: 241 VEADIADLDEADMEVFLADMGMEEPGLNRVIRAGYKLLGLHTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG IHTD +RGFIRA TIS+ D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPKAAGAIHTDFERGFIRAQTISFADYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|393759953|ref|ZP_10348765.1| GTP-binding protein YchF [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393161765|gb|EJC61827.1| GTP-binding protein YchF [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 363
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 279/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+G++EVPD+RL+ L IV
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLQDLAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +HV+RCF D+ + H++G+++
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDATVHVVRCFADENVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL L+DL ++EK + + K ++ + +L+ LL+RI L + +R
Sbjct: 121 PLADIEIINTELALADLGVVEKALHRNQKLARSGDKDAAKLVALLERIEKALGEGKSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL IK +T KP ++VANVKE+GF NN L+ ++ YA P++ +CA +
Sbjct: 181 LKLDEDELHQIKSYGFITAKPTMYVANVKEDGFTNNPHLEAVQNYAAADGAPVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +LG++E LN +IRA++SLL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIAELDDADKIEFLSDLGMEEPGLNRVIRAAYSLLGLQTYFTAGVKEVRAWTIRVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI++ DF+ KGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAFDDFVACKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|437999798|ref|YP_007183531.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812701|ref|YP_007449154.1| nucleotide-binding YchF GTPase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339032|gb|AFZ83454.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778670|gb|AGF49550.1| nucleotide-binding YchF GTPase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 357
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 286/363 (78%), Gaps = 6/363 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+GI+EVPD RL +L +I K
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGIVEVPDVRLINLASIAKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI A + VDIAGLVSGASKGEGLGN+FL+HIRET+ +++V+RCF D I + +G+I+
Sbjct: 61 EKIIHATAEFVDIAGLVSGASKGEGLGNQFLSHIRETDAILNVVRCFDDSNIINCNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+++ EVI+TELIL+DL +E+ + K KK + SI+LL R + +LN++ +R
Sbjct: 121 PVNEVEVIETELILADLTTIERILSKNQKK---SSNISIDLLN---RCLNHLNENKSLRD 174
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ ++ +K + L+IKPI+++ NV E+GF NN LL++LK ++ +NIP++ ICA +
Sbjct: 175 LDLSIDDSSLLKNYSFLSIKPIMYIGNVSEDGFINNPLLEKLKNFSLKRNIPMVTICASV 234
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E++I+D+ + D+K FL+++GLKE L+ LIRA+FSLL L+TYFTVG KE+RAWTIP G+T
Sbjct: 235 EQDIADMFDEDRKIFLEDMGLKEPGLDRLIRAAFSLLGLQTYFTVGVKEVRAWTIPVGST 294
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA TISY+DF+ Y GE + AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 295 ASKAAGVIHTDFEKGFIRAQTISYEDFIKYAGESRAREAGKVRSEGKDYIVKDGDIMNFL 354
Query: 361 FNI 363
FN+
Sbjct: 355 FNV 357
>gi|349573869|ref|ZP_08885836.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
shayeganii 871]
gi|348014539|gb|EGY53416.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria
shayeganii 871]
Length = 363
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/363 (55%), Positives = 274/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H+SG+++
Sbjct: 61 QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ L ++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIVREGKRAKAGDKDAQKLVALCEKLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K L LLT KP ++V NV E+GF+NN L +LK A +N P++ +CA L
Sbjct: 181 FGLDAEELALLKPLFLLTAKPAMYVGNVAEDGFENNPHLARLKELAAKENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +GL+E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELEDEEKTEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDYIALGGEAKAKEAGKMRAEGKEYVVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325266751|ref|ZP_08133425.1| GTP-dependent nucleic acid-binding protein EngD [Kingella
denitrificans ATCC 33394]
gi|324981799|gb|EGC17437.1| GTP-dependent nucleic acid-binding protein EngD [Kingella
denitrificans ATCC 33394]
Length = 363
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QRMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK I +E K+ ++ + +L+ +L++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAIIREGKRAKSGDKDAQKLVAVLEKLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +EL ++ L LLT KP ++VANV E+GF +N D+LK A +N PI+ ICA +
Sbjct: 181 FGLDKDELALLRPLFLLTAKPAMYVANVSEDGFTDNPHFDRLKALAEQENAPIVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +K FL +G++E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESDIAELEDDEKAEFLAEMGMEEAGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFIALGGEAKAKEAGKMRAEGKEYIVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238021765|ref|ZP_04602191.1| hypothetical protein GCWU000324_01668 [Kingella oralis ATCC 51147]
gi|237866379|gb|EEP67421.1| hypothetical protein GCWU000324_01668 [Kingella oralis ATCC 51147]
Length = 363
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN+GI+EVPD R+ L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PAI++ VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF DD I H++G+++
Sbjct: 61 QRMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DLA +EK + +E KK ++ + +L+ L ++++ +LN+ P+R
Sbjct: 121 PIADIETIGTELALADLASVEKAMLREGKKAKSGDKDAQKLVALCEKLLPHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E L +K L LLT KP ++V NV E+GF+NN LD+L+ A +N P++ +CA L
Sbjct: 181 LGLDAESLALLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLRELAAKENAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +G++E LN LIRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAELADDEKAEFLAEMGMEEAGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ GE K AGK+R+EGK+Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVIAYDDFVALGGEAKAKEAGKMRAEGKEYIVQDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|294635775|ref|ZP_06714235.1| GTP-binding protein YchF [Edwardsiella tarda ATCC 23685]
gi|451964522|ref|ZP_21917786.1| putative ribosome-associated ATPase [Edwardsiella tarda NBRC
105688]
gi|291090875|gb|EFE23436.1| GTP-binding protein YchF [Edwardsiella tarda ATCC 23685]
gi|451316642|dbj|GAC63148.1| putative ribosome-associated ATPase [Edwardsiella tarda NBRC
105688]
Length = 363
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG +N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIVHVSGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKLELSALEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE +IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSDEEKAAIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRDEFMAELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|304311479|ref|YP_003811077.1| GTPase, translation factor [gamma proteobacterium HdN1]
gi|301797212|emb|CBL45432.1| Predicted GTPase, probable translation factor [gamma
proteobacterium HdN1]
Length = 363
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 276/363 (76%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTIEPNTGIVPIPDARLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF DD + H++G+I+
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDDNVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+D+ +EK + + +K ++ S ++L++I+ LN+ P R
Sbjct: 121 PLADIETINTELALADMDSVEKSLHRLSKLAKGGDKESQARKEVLEKILPLLNEGRPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EEL +K NLLTIKP +++ANV+E+GF+NN LLD+++ +A N+ ++ ICAK+
Sbjct: 181 ALLSAEELKLVKSQNLLTIKPTMYIANVEEDGFENNPLLDRVREFAVNEGSIVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +LG++E LN +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDADKVEFLADLGMEEPGLNRVIRAGYSLLGLQTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA + Y+DF+ +KGEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAAVIHTDFEKGFIRAEVVGYEDFVAFKGEQGAKDAGKWRLEGKEYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238919461|ref|YP_002932976.1| GTP-binding protein YchF [Edwardsiella ictaluri 93-146]
gi|269138749|ref|YP_003295450.1| translation-associated GTPase [Edwardsiella tarda EIB202]
gi|387867429|ref|YP_005698898.1| GTP-binding and nucleic acid-binding protein YchF [Edwardsiella
tarda FL6-60]
gi|238869030|gb|ACR68741.1| GTP-binding protein YchF [Edwardsiella ictaluri 93-146]
gi|267984410|gb|ACY84239.1| translation-associated GTPase [Edwardsiella tarda EIB202]
gi|304558742|gb|ADM41406.1| GTP-binding and nucleic acid-binding protein YchF [Edwardsiella
tarda FL6-60]
Length = 363
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG +N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIVHVSGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKLELSALEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE +IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSDEEKGAIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVRAIADAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRDEFMAELGLEEPGLNRVIRAGYTLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381157243|ref|ZP_09866477.1| GTP-binding protein YchF [Thiorhodovibrio sp. 970]
gi|380881106|gb|EIC23196.1| GTP-binding protein YchF [Thiorhodovibrio sp. 970]
Length = 363
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + I K+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKSGIAAENYPFCTIDPNVGVVPLPDDRLDVIAAIAKS 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H+SG ++
Sbjct: 61 AKTIPTSMQFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDDDVVHVSGGVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL L+D+ +EK +DK ++ ++ + +LL+R+ +LN+ P+R
Sbjct: 121 PLRDMEIINTELALADMDSVEKALDKATRQSKTGDKLAAARRELLERVAAHLNEGHPLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ ++ +++ L L+T KP++++ANV E+GF NN LL +++ A + ++ +CA +
Sbjct: 181 LGLDADQQAALRDLFLMTGKPVLYIANVAEDGFTNNPLLARVQGQAAREGAEVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ + FL +LGL+E LN ++RA + LL L TYFT G KE RAWTIP+ T
Sbjct: 241 ESEMVELDADSRADFLADLGLEEPGLNRVVRAGYRLLGLETYFTAGPKEARAWTIPHAAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ YKGEQG K+AG++RSEGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYEDFVNYKGEQGAKDAGRLRSEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350560651|ref|ZP_08929491.1| GTP-binding protein YchF [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782919|gb|EGZ37202.1| GTP-binding protein YchF [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 363
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 275/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ +I+AENYPFCTI+PN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTRAEIAAENYPFCTIDPNVGVVEVPDPRLTVLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GA++GEGLGN+FLAH+RET+ + V+RCF+DD I H++G I+
Sbjct: 61 QRVLPTTVEFVDIAGLVAGAAQGEGLGNQFLAHVRETDAIAQVVRCFEDDDIVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL L K I + + +++ +I L++ +R+ L+K P+R
Sbjct: 121 PLADIETIATELALADLDTLSKAITRLTRAAKSQDKEAIARLEVAERVAAGLDKGTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+NE L ++ L+LLT KP++++ANV E+GF++N LL Q++ +A + ++ +CA +
Sbjct: 181 QALSNETLALLRDLHLLTAKPLLYIANVAEDGFRDNPLLAQVEAHASTEGAQVVPVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L ++ FL LGL+E L+ +IRA++ LLDL+TYFT G KE+RAWT+ G+T
Sbjct: 241 EAEIAQLEAEERAEFLAELGLEEPGLDRVIRATYRLLDLQTYFTCGPKEVRAWTVRRGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y+DF+ + GEQG K+AGK R EGK+Y++ +GD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYQDFVAHGGEQGAKDAGKWRLEGKEYVMNEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|292493878|ref|YP_003529317.1| GTP-binding protein YchF [Nitrosococcus halophilus Nc4]
gi|291582473|gb|ADE16930.1| GTP-binding protein YchF [Nitrosococcus halophilus Nc4]
Length = 362
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 266/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTI+PN+G++ VPD RL + IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRAGIEAQNYPFCTIDPNVGVVPVPDPRLDKIAAIVGP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA + VDIAGLV+GAS+GEGLGN+FLAHIRET + HV+RCF+D + H++GE+N
Sbjct: 61 QQVLPATMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQNVVHVAGEVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + + E +I LL+++ +L+ P R
Sbjct: 121 PLGDIEVINTELALADLETVEKALSRATRAAKADKE-AITFKNLLEKMGEHLDAGKPARA 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EEL S++ L+LLT KP +++ANV E+GF+NN L +++ A + ++ +CA +
Sbjct: 180 LALDKEELKSLQSLHLLTSKPTLYIANVAEDGFENNPWLQEVEALAAKEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S L + +K+ FL LG++E LN +IRA + LL L+T+FT G KE+RAWT+P G T
Sbjct: 240 EAELSQLEDTEKEEFLAELGIEEPGLNRVIRAGYKLLGLQTFFTAGPKEVRAWTVPIGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +SY+DF+ Y+GEQG K AGK R EGK Y+V+DGDI++F
Sbjct: 300 APQAAGVIHTDFEKGFIRAEVVSYEDFITYQGEQGAKEAGKWRLEGKDYIVQDGDIMHFR 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|209516541|ref|ZP_03265395.1| GTP-binding protein YchF [Burkholderia sp. H160]
gi|209502982|gb|EEA02984.1| GTP-binding protein YchF [Burkholderia sp. H160]
Length = 364
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 277/364 (76%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN+GI+EVPD RLK L IVK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA+++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++ +I+
Sbjct: 61 ERILPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE-HSIELLKLLKRIIFNLNKSIPIR 179
P+ D EVI TEL L+DL +EK + + +K N+ + + + +L+++ L+++ P+R
Sbjct: 121 PLSDIEVINTELALADLGTVEKALTRYSKAAKSGNDKEAAKNVAVLEKVRAQLDQAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE ++K L+T KP ++VANVKENGF+NN LD + +A + P++ +CA
Sbjct: 181 ALELTAEEKATLKPFCLITAKPTMYVANVKENGFENNPHLDAVTKFAAAEGSPVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+DL+ D + FL ++G++E LN +IRA + LL L TYFT G KE+RAWTI G
Sbjct: 241 VEAEIADLDEADMEVFLADMGMEEPGLNRVIRAGYKLLGLHTYFTAGVKEVRAWTIHIGD 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG IHTD +RGFIRA TI + D++ YKGEQG K AGK+R+EGK+Y+V DGD++NF
Sbjct: 301 TAPKAAGAIHTDFERGFIRAQTIGFNDYITYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|308186577|ref|YP_003930708.1| GTP-binding protein 9 [Pantoea vagans C9-1]
gi|308057087|gb|ADO09259.1| Putative GTP-binding protein 9 [Pantoea vagans C9-1]
Length = 363
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ ++ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLDADDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDREEFMAELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|372273969|ref|ZP_09510005.1| GTP-binding protein YchF [Pantoea sp. SL1_M5]
Length = 363
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ ++ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLDEDDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMAELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|304397550|ref|ZP_07379427.1| GTP-binding protein YchF [Pantoea sp. aB]
gi|440758577|ref|ZP_20937737.1| GTP-binding and nucleic acid-binding protein YchF [Pantoea
agglomerans 299R]
gi|304354722|gb|EFM19092.1| GTP-binding protein YchF [Pantoea sp. aB]
gi|436427683|gb|ELP25360.1| GTP-binding and nucleic acid-binding protein YchF [Pantoea
agglomerans 299R]
Length = 363
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ ++ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLDADDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMAELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387131037|ref|YP_006293927.1| GTP-binding and nucleic acid-binding protein YchF [Methylophaga sp.
JAM7]
gi|386272326|gb|AFJ03240.1| GTP-binding and nucleic acid-binding protein YchF [Methylophaga sp.
JAM7]
Length = 363
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/363 (53%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTIEPN+GI+ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIEPNVGIVPVPDPRLTKLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD + H++G+++
Sbjct: 61 QKLLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDDNVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK I K K+ ++ + L LL+++ +L+ P+R
Sbjct: 121 PLDDIEVINTELALADLESVEKAILKTAKEAKSGDKTAKLRLTLLEQVRDHLDGGQPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ ++L + L+LLTIKP +++ANV E+GF+NN LD +K A +N ++IICA +
Sbjct: 181 MQLDADQLGLMSGLHLLTIKPTMYIANVAEDGFENNPALDAVKTLAEQENAVVVIICASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + DK FL LGL+E LN +IR+ +SLL L TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIADLADADKAEFLAELGLEEPGLNRVIRSGYSLLGLHTYFTAGVKEVRAWTVEIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG+IHTD ++GFIRA I Y DF+ + GEQG K+AGK R EGK Y+++DGD+++F
Sbjct: 301 APEGAGVIHTDFQKGFIRAEVIGYDDFVQFNGEQGAKDAGKWRLEGKDYVIKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|288940658|ref|YP_003442898.1| GTP-binding protein YchF [Allochromatium vinosum DSM 180]
gi|288896030|gb|ADC61866.1| GTP-binding protein YchF [Allochromatium vinosum DSM 180]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAAIAAENYPFCTIDPNVGVVPLPDPRLDVIASITKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D + H++G+++
Sbjct: 61 QKVLPTSMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFENDDVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL + K +D+ + ++ ++ ++L+R L+ P+R
Sbjct: 121 PLGDIEVINTELALADLESVGKALDRAQRAARTGDKQILKRKEILERAQAQLDAGQPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL ++ L LLT KP +++ANV E+GF+NN LLD+++ A ++ ++ +CA +
Sbjct: 181 LGLDEDELDELRDLFLLTAKPTMYIANVSEDGFENNPLLDRVRALAESEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L++ + FL +LGL+E LN ++RA + LL L TYFT G KE+RAWTIP +
Sbjct: 241 EAEILELDDEARDEFLADLGLEEPGLNRVVRAGYRLLGLETYFTAGPKEVRAWTIPKQSR 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA I+Y+DF+ KGEQG K AGK+RSEGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVIAYEDFVACKGEQGAKEAGKLRSEGKEYVVQDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410087761|ref|ZP_11284462.1| GTP-binding and nucleic acid-binding protein YchF [Morganella
morganii SC01]
gi|421493660|ref|ZP_15941015.1| hypothetical protein MU9_2185 [Morganella morganii subsp. morganii
KT]
gi|455739137|ref|YP_007505403.1| GTP-binding and nucleic acid-binding protein YchF [Morganella
morganii subsp. morganii KT]
gi|400192037|gb|EJO25178.1| hypothetical protein MU9_2185 [Morganella morganii subsp. morganii
KT]
gi|409765755|gb|EKN49858.1| GTP-binding and nucleic acid-binding protein YchF [Morganella
morganii SC01]
gi|455420700|gb|AGG31030.1| GTP-binding and nucleic acid-binding protein YchF [Morganella
morganii subsp. morganii KT]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDARLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF DD I H+SG +N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFDDDNIVHVSGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L++L++ + L + +R
Sbjct: 121 PAEDIDTINTELALADLDTCERAIHRVQKRAKGGDKDAKLELEVLEKCLPLLENAQMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++LN EE+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLNKEEMGAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ +LG++E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDGDREEFMADLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIQYKGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|390433695|ref|ZP_10222233.1| GTP-binding protein YchF [Pantoea agglomerans IG1]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ ++ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LNLDEDDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDEVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMAELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|344344757|ref|ZP_08775617.1| GTP-binding protein YchF [Marichromatium purpuratum 984]
gi|343803691|gb|EGV21597.1| GTP-binding protein YchF [Marichromatium purpuratum 984]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLF ALTK I+AENYPFCTI+PN+G++ +PD RL + I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFKALTKASIAAENYPFCTIDPNVGVVPLPDPRLDVIAGITKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD + H++G ++
Sbjct: 61 ERVLPTTMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFVDDDVVHVAGGVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +++ +D+ + ++ + LL+R+ L+ P+R
Sbjct: 121 PLRDIEVIDTELALADLESVDRALDRAQRMAKTGDKQVLARKALLERVREQLDSGAPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +E ++ L LLT KP +++ANV E+GF+ N +L+ ++ +A + ++ +CA +
Sbjct: 181 MGLDEDEQQELRDLFLLTAKPTMYIANVAEDGFEANAMLEAVRAHATAEGAEVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L + ++ FL LGL E LN ++RA + LL L TYFT G KE RAWTIP G
Sbjct: 241 EAEVVELEDDERDEFLAELGLAEPGLNRVVRAGYQLLGLETYFTSGPKETRAWTIPAGAK 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y+DF+ KGEQG K AGK+RSEGK+Y+V+DGDI++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYEDFVACKGEQGAKEAGKLRSEGKEYVVKDGDIIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408374417|ref|ZP_11172104.1| GTP-binding protein YchF [Alcanivorax hongdengensis A-11-3]
gi|407765692|gb|EKF74142.1| GTP-binding protein YchF [Alcanivorax hongdengensis A-11-3]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPVPDPRLDKLAAIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ + H++G+++
Sbjct: 61 ERVMPATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDENVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VI TEL L+DL +EK + K +++ + LL +L +++ LN+ P R
Sbjct: 121 PLDDIAVINTELALADLDTVEKAHLRATKAAKGQDKDAKGLLPVLDKLLPALNEGEPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+++E ++K LNLLT+KP +++ANV E+GF+NN LLD ++ A +N ++ ICAK+
Sbjct: 181 VELDSDERKTLKSLNLLTLKPTMYIANVDEDGFENNALLDAVRALAEKENASVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA F LL L+TYFT GKKE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKADFLADLGMEEPGLNRVIRAGFDLLGLQTYFTAGKKEVRAWTVRVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y D++ + GE G K+AGK R EGK Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTAYDDYIEHNGESGAKDAGKWRLEGKDYIVADGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|336249818|ref|YP_004593528.1| GTP-binding protein YchF [Enterobacter aerogenes KCTC 2190]
gi|334735874|gb|AEG98249.1| GTP-binding protein YchF [Enterobacter aerogenes KCTC 2190]
Length = 363
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L K+ +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVSKKAKGGDKDAKVELAALEKCLPQLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|170768134|ref|ZP_02902587.1| GTP-binding protein EngD [Escherichia albertii TW07627]
gi|170122900|gb|EDS91831.1| GTP-binding protein EngD [Escherichia albertii TW07627]
Length = 363
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEEREEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407697456|ref|YP_006822244.1| GTPase [Alcanivorax dieselolei B5]
gi|407254794|gb|AFT71901.1| putative GTPase, probable translation factor [Alcanivorax
dieselolei B5]
Length = 363
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD R L IV
Sbjct: 1 MGIQCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPIPDPRQDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D+ + H++G+++
Sbjct: 61 ERVLPATMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDENVIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VI TEL L+DL +E+ + K +N+ + LL +L +++ LN+ P R
Sbjct: 121 PLDDIGVINTELALADLDTVERAHQRATKAAKGQNKEAQALLPVLDKVLPMLNEGEPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+++E ++ LNLLT+KP +++ANV E+GF NN LLD ++ A +N ++ ICAK+
Sbjct: 181 VELSDDERKQLRSLNLLTLKPTMYIANVDEDGFDNNPLLDAVRELAEKENASVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL L TYFT GKKE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKADFLADLGMEEPGLNRVIRAGYTLLGLHTYFTAGKKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y D++ Y GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTAYDDYVAYNGEQGAKDAGKWRLEGKEYVVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432513527|ref|ZP_19750756.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE224]
gi|432698649|ref|ZP_19933810.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE169]
gi|432745260|ref|ZP_19979954.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE43]
gi|433143814|ref|ZP_20328974.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE168]
gi|431043348|gb|ELD53680.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE224]
gi|431245225|gb|ELF39519.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE169]
gi|431292829|gb|ELF83211.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE43]
gi|431664468|gb|ELJ31206.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE168]
Length = 363
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGLKE LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLKEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|253990021|ref|YP_003041377.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253781471|emb|CAQ84634.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 363
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF +D I H+SG+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFVNDNIIHVSGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL LSDL E+ I + KK ++ + L++L++ + +L ++ +R
Sbjct: 121 PAADIEIINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELEVLEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSTEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDAVRTIAAQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEDDEREEFMAELGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422805349|ref|ZP_16853781.1| GTP-binding protein YchF [Escherichia fergusonii B253]
gi|424816502|ref|ZP_18241653.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia
fergusonii ECD227]
gi|432616106|ref|ZP_19852230.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE75]
gi|324113962|gb|EGC07936.1| GTP-binding protein YchF [Escherichia fergusonii B253]
gi|325497522|gb|EGC95381.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia
fergusonii ECD227]
gi|431156038|gb|ELE56779.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE75]
Length = 363
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEEREEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|444351969|ref|YP_007388113.1| GTP-binding and nucleic acid-binding protein YchF [Enterobacter
aerogenes EA1509E]
gi|443902799|emb|CCG30573.1| GTP-binding and nucleic acid-binding protein YchF [Enterobacter
aerogenes EA1509E]
Length = 363
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L K+ +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVSKKAKGGDKDAKIELAALEKCLPQLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKDAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410664408|ref|YP_006916779.1| GTP-binding protein YchF [Simiduia agarivorans SA1 = DSM 21679]
gi|409026765|gb|AFU99049.1| GTP-binding protein YchF [Simiduia agarivorans SA1 = DSM 21679]
Length = 363
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD R L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGVVPVPDPRQDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ +DIAG+V+GASKGEGLGNKFLA+IRET+ + HV+RCF++D + H++ +++
Sbjct: 61 ERVVPTTMEFIDIAGIVAGASKGEGLGNKFLANIRETDAIAHVVRCFENDNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ + + K +++ +I LL++I+ +LN++ P+R
Sbjct: 121 PAADIDVINTELALADLDTCERALQRFTKAAKGQDKDAIAKKALLEKILPHLNEAKPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +EL ++K LNLLT+KP +++ANV E+GF+NN LD + A + ++ IC KL
Sbjct: 181 FGLDADELAALKELNLLTVKPTMYIANVDEDGFENNPYLDVVNKIAAEEGAVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL LG++E LN +IRA + LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELEDDEKAEFLAELGMEEPGLNRVIRAGYKLLNLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y DF+ Y+GEQG K AGK R EGK Y+V+DGD+L+FL
Sbjct: 301 APQAAGVIHTDFERGFIRAETIAYDDFVQYQGEQGAKTAGKSRKEGKDYVVKDGDVLHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|152970790|ref|YP_001335899.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238895304|ref|YP_002920039.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|330009878|ref|ZP_08306633.1| GTP-binding protein YchF [Klebsiella sp. MS 92-3]
gi|365137729|ref|ZP_09344441.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella sp.
4_1_44FAA]
gi|378979401|ref|YP_005227542.1| translation-associated GTPase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386035387|ref|YP_005955300.1| GTP-binding protein YchF [Klebsiella pneumoniae KCTC 2242]
gi|402780246|ref|YP_006635792.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419976515|ref|ZP_14491911.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419979702|ref|ZP_14494992.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419987566|ref|ZP_14502683.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419993303|ref|ZP_14508247.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419999495|ref|ZP_14514269.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003158|ref|ZP_14517805.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420008654|ref|ZP_14523142.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420015264|ref|ZP_14529566.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420020562|ref|ZP_14534749.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026253|ref|ZP_14540257.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031888|ref|ZP_14545706.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037727|ref|ZP_14551379.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043310|ref|ZP_14556798.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420049469|ref|ZP_14562777.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420054925|ref|ZP_14568095.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062647|ref|ZP_14575613.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420066680|ref|ZP_14579479.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420074475|ref|ZP_14587081.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420080024|ref|ZP_14592459.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084792|ref|ZP_14597040.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421915842|ref|ZP_16345435.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424831182|ref|ZP_18255910.1| GTP-binding protein EngD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424932888|ref|ZP_18351260.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425082083|ref|ZP_18485180.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425092122|ref|ZP_18495207.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428148988|ref|ZP_18996827.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933226|ref|ZP_19006784.1| GTP-binding protein YchF [Klebsiella pneumoniae JHCK1]
gi|428940510|ref|ZP_19013591.1| GTP-binding protein YchF [Klebsiella pneumoniae VA360]
gi|449061560|ref|ZP_21738967.1| GTP-binding protein YchF [Klebsiella pneumoniae hvKP1]
gi|150955639|gb|ABR77669.1| putative GTP-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238547621|dbj|BAH63972.1| putative GTP-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328534673|gb|EGF61239.1| GTP-binding protein YchF [Klebsiella sp. MS 92-3]
gi|339762515|gb|AEJ98735.1| GTP-binding protein YchF [Klebsiella pneumoniae KCTC 2242]
gi|363655842|gb|EHL94638.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella sp.
4_1_44FAA]
gi|364518812|gb|AEW61940.1| translation-associated GTPase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397340454|gb|EJJ33658.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397343981|gb|EJJ37120.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397348523|gb|EJJ41623.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397358036|gb|EJJ50768.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397358943|gb|EJJ51651.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397370142|gb|EJJ62733.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397376907|gb|EJJ69154.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397382845|gb|EJJ74999.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397387893|gb|EJJ79900.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397395879|gb|EJJ87579.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398791|gb|EJJ90449.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404966|gb|EJJ96445.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397413402|gb|EJK04619.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397414084|gb|EJK05286.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397422190|gb|EJK13167.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427529|gb|EJK18298.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397429568|gb|EJK20282.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435370|gb|EJK25989.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397443061|gb|EJK33401.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397449823|gb|EJK39945.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402541153|gb|AFQ65302.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405601309|gb|EKB74463.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405612097|gb|EKB84855.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407807075|gb|EKF78326.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410121882|emb|CCM88060.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414708615|emb|CCN30319.1| GTP-binding protein EngD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|426302134|gb|EKV64347.1| GTP-binding protein YchF [Klebsiella pneumoniae VA360]
gi|426305723|gb|EKV67839.1| GTP-binding protein YchF [Klebsiella pneumoniae JHCK1]
gi|427541084|emb|CCM92965.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448872926|gb|EMB08061.1| GTP-binding protein YchF [Klebsiella pneumoniae hvKP1]
Length = 363
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVSKKAKGGDKDAKVELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432376343|ref|ZP_19619349.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE12]
gi|430900223|gb|ELC22244.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE12]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGDDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|419763606|ref|ZP_14289849.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|425076183|ref|ZP_18479286.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425086816|ref|ZP_18489909.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|397743535|gb|EJK90750.1| GTP-binding protein YchF [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|405593687|gb|EKB67128.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405603540|gb|EKB76661.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVSKKAKGGDKDAKVELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|397165384|ref|ZP_10488835.1| GTP-dependent nucleic acid-binding protein engD [Enterobacter
radicincitans DSM 16656]
gi|396093041|gb|EJI90600.1| GTP-dependent nucleic acid-binding protein engD [Enterobacter
radicincitans DSM 16656]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIHRVSKKAKGGDKDAKVELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|260598224|ref|YP_003210795.1| GTP-binding protein YchF [Cronobacter turicensis z3032]
gi|429100859|ref|ZP_19162833.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
turicensis 564]
gi|260217401|emb|CBA31468.1| GTP-dependent nucleic acid-binding protein engD [Cronobacter
turicensis z3032]
gi|426287508|emb|CCJ88946.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
turicensis 564]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKELIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEDRDEFMKELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15830962|ref|NP_309735.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O157:H7 str. Sakai]
gi|16129166|ref|NP_415721.1| ATPase, K+-dependent, ribosome-associated [Escherichia coli str.
K-12 substr. MG1655]
gi|24112602|ref|NP_707112.1| GTP-binding protein YchF [Shigella flexneri 2a str. 301]
gi|30062727|ref|NP_836898.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri
2a str. 2457T]
gi|82544343|ref|YP_408290.1| GTP-dependent nucleic acid-binding protein EngD [Shigella boydii
Sb227]
gi|82776543|ref|YP_402892.1| GTP-dependent nucleic acid-binding protein EngD [Shigella
dysenteriae Sd197]
gi|110805208|ref|YP_688728.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri
5 str. 8401]
gi|157157840|ref|YP_001462455.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
E24377A]
gi|157160708|ref|YP_001458026.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
HS]
gi|168750762|ref|ZP_02775784.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4113]
gi|168756564|ref|ZP_02781571.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4401]
gi|168764411|ref|ZP_02789418.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4501]
gi|168771090|ref|ZP_02796097.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4486]
gi|168777787|ref|ZP_02802794.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4196]
gi|168782557|ref|ZP_02807564.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4076]
gi|168787705|ref|ZP_02812712.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC869]
gi|168802105|ref|ZP_02827112.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC508]
gi|170020430|ref|YP_001725384.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
ATCC 8739]
gi|170080831|ref|YP_001730151.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
str. K-12 substr. DH10B]
gi|170680985|ref|YP_001743991.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
SMS-3-5]
gi|187730029|ref|YP_001879986.1| GTP-dependent nucleic acid-binding protein EngD [Shigella boydii
CDC 3083-94]
gi|191168519|ref|ZP_03030305.1| GTP-binding protein EngD [Escherichia coli B7A]
gi|193066743|ref|ZP_03047768.1| GTP-binding protein EngD [Escherichia coli E22]
gi|193071184|ref|ZP_03052107.1| GTP-binding protein EngD [Escherichia coli E110019]
gi|194425815|ref|ZP_03058371.1| GTP-binding protein EngD [Escherichia coli B171]
gi|194434920|ref|ZP_03067165.1| GTP-binding protein EngD [Shigella dysenteriae 1012]
gi|194436983|ref|ZP_03069082.1| GTP-binding protein EngD [Escherichia coli 101-1]
gi|195938852|ref|ZP_03084234.1| translation-associated GTPase [Escherichia coli O157:H7 str.
EC4024]
gi|208806944|ref|ZP_03249281.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4206]
gi|208816418|ref|ZP_03257597.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4045]
gi|208822259|ref|ZP_03262578.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4042]
gi|209398838|ref|YP_002270137.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O157:H7 str. EC4115]
gi|209918444|ref|YP_002292528.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
SE11]
gi|217328294|ref|ZP_03444376.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. TW14588]
gi|218553757|ref|YP_002386670.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
IAI1]
gi|218694717|ref|YP_002402384.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
55989]
gi|218699910|ref|YP_002407539.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
IAI39]
gi|218704725|ref|YP_002412244.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UMN026]
gi|238900434|ref|YP_002926230.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
BW2952]
gi|254792673|ref|YP_003077510.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O157:H7 str. TW14359]
gi|260843495|ref|YP_003221273.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|260854864|ref|YP_003228755.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O26:H11 str. 11368]
gi|260867608|ref|YP_003234010.1| putative GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|261224935|ref|ZP_05939216.1| predicted GTP-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257208|ref|ZP_05949741.1| putative GTP-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291282228|ref|YP_003499046.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O55:H7 str. CB9615]
gi|293404746|ref|ZP_06648738.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
FVEC1412]
gi|293409590|ref|ZP_06653166.1| GTP-binding protein YchF [Escherichia coli B354]
gi|293414480|ref|ZP_06657129.1| GTP-binding protein YchF [Escherichia coli B185]
gi|293433519|ref|ZP_06661947.1| GTP-binding protein YchF [Escherichia coli B088]
gi|298380389|ref|ZP_06989988.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
FVEC1302]
gi|300816894|ref|ZP_07097114.1| GTP-binding protein YchF [Escherichia coli MS 107-1]
gi|300821027|ref|ZP_07101176.1| GTP-binding protein YchF [Escherichia coli MS 119-7]
gi|300896590|ref|ZP_07115110.1| GTP-binding protein YchF [Escherichia coli MS 198-1]
gi|300920400|ref|ZP_07136835.1| GTP-binding protein YchF [Escherichia coli MS 115-1]
gi|300928251|ref|ZP_07143788.1| GTP-binding protein YchF [Escherichia coli MS 187-1]
gi|300939561|ref|ZP_07154218.1| GTP-binding protein YchF [Escherichia coli MS 21-1]
gi|300951670|ref|ZP_07165494.1| GTP-binding protein YchF [Escherichia coli MS 116-1]
gi|300955602|ref|ZP_07167960.1| GTP-binding protein YchF [Escherichia coli MS 175-1]
gi|301017235|ref|ZP_07182016.1| GTP-binding protein YchF [Escherichia coli MS 69-1]
gi|301029495|ref|ZP_07192576.1| GTP-binding protein YchF [Escherichia coli MS 196-1]
gi|301648144|ref|ZP_07247897.1| GTP-binding protein YchF [Escherichia coli MS 146-1]
gi|307310042|ref|ZP_07589692.1| GTP-binding protein YchF [Escherichia coli W]
gi|309789169|ref|ZP_07683762.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 1617]
gi|309794293|ref|ZP_07688717.1| GTP-binding protein YchF [Escherichia coli MS 145-7]
gi|312971390|ref|ZP_07785565.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
1827-70]
gi|331641732|ref|ZP_08342867.1| GTP-binding protein YchF [Escherichia coli H736]
gi|331662606|ref|ZP_08363529.1| GTP-binding protein YchF [Escherichia coli TA143]
gi|331667587|ref|ZP_08368451.1| GTP-binding protein YchF [Escherichia coli TA271]
gi|331672738|ref|ZP_08373524.1| GTP-binding protein YchF [Escherichia coli TA280]
gi|331676983|ref|ZP_08377679.1| GTP-binding protein YchF [Escherichia coli H591]
gi|332279607|ref|ZP_08392020.1| translation-associated GTPase [Shigella sp. D9]
gi|378713421|ref|YP_005278314.1| GTP-binding protein YchF [Escherichia coli KO11FL]
gi|384542842|ref|YP_005726904.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2002017]
gi|386280291|ref|ZP_10057959.1| GTP-dependent nucleic acid-binding protein engD [Escherichia sp.
4_1_40B]
gi|386595973|ref|YP_006092373.1| GTP-binding protein YchF [Escherichia coli DH1]
gi|386608537|ref|YP_006124023.1| GTP-binding protein [Escherichia coli W]
gi|386613616|ref|YP_006133282.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UMNK88]
gi|386623748|ref|YP_006143476.1| putative GTP-binding protein [Escherichia coli O7:K1 str. CE10]
gi|386701845|ref|YP_006165682.1| GTP-binding protein YchF [Escherichia coli KO11FL]
gi|386705104|ref|YP_006168951.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
P12b]
gi|386708992|ref|YP_006172713.1| GTP-binding protein YchF [Escherichia coli W]
gi|387506335|ref|YP_006158591.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. RM12579]
gi|387606715|ref|YP_006095571.1| GTP-dependent nucleic acid-binding protein [Escherichia coli 042]
gi|387611766|ref|YP_006114882.1| GTP-dependent nucleic acid-binding protein [Escherichia coli ETEC
H10407]
gi|387620916|ref|YP_006128543.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DH1]
gi|387882201|ref|YP_006312503.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
Xuzhou21]
gi|388477282|ref|YP_489470.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110]
gi|404374564|ref|ZP_10979775.1| GTP-dependent nucleic acid-binding protein engD [Escherichia sp.
1_1_43]
gi|407468873|ref|YP_006784685.1| GTP-binding protein YchF [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482460|ref|YP_006779609.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483012|ref|YP_006770558.1| GTP-binding protein YchF [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415777957|ref|ZP_11489067.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3431]
gi|415790779|ref|ZP_11495264.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
EPECa14]
gi|415796828|ref|ZP_11497823.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
E128010]
gi|415812588|ref|ZP_11504725.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
LT-68]
gi|415819918|ref|ZP_11509215.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
OK1180]
gi|415827157|ref|ZP_11514074.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
OK1357]
gi|415841392|ref|ZP_11522463.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
RN587/1]
gi|415856020|ref|ZP_11531072.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2a str. 2457T]
gi|415878239|ref|ZP_11544122.1| GTP-binding protein YchF [Escherichia coli MS 79-10]
gi|416269086|ref|ZP_11642345.1| GTP-binding and nucleic acid-binding protein YchF [Shigella
dysenteriae CDC 74-1112]
gi|416280683|ref|ZP_11645488.1| GTP-binding and nucleic acid-binding protein YchF [Shigella boydii
ATCC 9905]
gi|416297687|ref|ZP_11651721.1| GTP-binding and nucleic acid-binding protein YchF [Shigella
flexneri CDC 796-83]
gi|416311593|ref|ZP_11657140.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. 1044]
gi|416323606|ref|ZP_11664983.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. EC1212]
gi|416325148|ref|ZP_11665616.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. 1125]
gi|416344491|ref|ZP_11678346.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
EC4100B]
gi|416782373|ref|ZP_11877803.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. G5101]
gi|416793563|ref|ZP_11882724.1| GTP-binding protein YchF [Escherichia coli O157:H- str. 493-89]
gi|416805025|ref|ZP_11887576.1| GTP-binding protein YchF [Escherichia coli O157:H- str. H 2687]
gi|416815950|ref|ZP_11892288.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. 3256-97]
gi|416825766|ref|ZP_11896875.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. USDA 5905]
gi|416836531|ref|ZP_11902146.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. LSU-61]
gi|416896685|ref|ZP_11926532.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_7v]
gi|417112949|ref|ZP_11964869.1| GTP-binding protein YchF [Escherichia coli 1.2741]
gi|417125891|ref|ZP_11973751.1| GTP-binding protein YchF [Escherichia coli 97.0246]
gi|417135114|ref|ZP_11979899.1| GTP-binding protein YchF [Escherichia coli 5.0588]
gi|417137347|ref|ZP_11981137.1| GTP-binding protein YchF [Escherichia coli 97.0259]
gi|417143873|ref|ZP_11985835.1| GTP-binding protein YchF [Escherichia coli 1.2264]
gi|417155827|ref|ZP_11993956.1| GTP-binding protein YchF [Escherichia coli 96.0497]
gi|417158937|ref|ZP_11996295.1| GTP-binding protein YchF [Escherichia coli 99.0741]
gi|417173014|ref|ZP_12003047.1| GTP-binding protein YchF [Escherichia coli 3.2608]
gi|417180035|ref|ZP_12007743.1| GTP-binding protein YchF [Escherichia coli 93.0624]
gi|417200749|ref|ZP_12017542.1| GTP-binding protein YchF [Escherichia coli 4.0522]
gi|417205680|ref|ZP_12019178.1| GTP-binding protein YchF [Escherichia coli JB1-95]
gi|417224893|ref|ZP_12028184.1| GTP-binding protein YchF [Escherichia coli 96.154]
gi|417233371|ref|ZP_12034135.1| GTP-binding protein YchF [Escherichia coli 5.0959]
gi|417236842|ref|ZP_12034994.1| GTP-binding protein YchF [Escherichia coli 9.0111]
gi|417253680|ref|ZP_12045436.1| GTP-binding protein YchF [Escherichia coli 4.0967]
gi|417260348|ref|ZP_12047849.1| GTP-binding protein YchF [Escherichia coli 2.3916]
gi|417266265|ref|ZP_12053633.1| GTP-binding protein YchF [Escherichia coli 3.3884]
gi|417274981|ref|ZP_12062321.1| GTP-binding protein YchF [Escherichia coli 2.4168]
gi|417278228|ref|ZP_12065543.1| GTP-binding protein YchF [Escherichia coli 3.2303]
gi|417283551|ref|ZP_12070848.1| GTP-binding protein YchF [Escherichia coli 3003]
gi|417290010|ref|ZP_12077293.1| GTP-binding protein YchF [Escherichia coli B41]
gi|417297642|ref|ZP_12084886.1| GTP-binding protein YchF [Escherichia coli 900105 (10e)]
gi|417307695|ref|ZP_12094557.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PCN033]
gi|417580520|ref|ZP_12231336.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_B2F1]
gi|417586128|ref|ZP_12236901.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_C165-02]
gi|417591113|ref|ZP_12241822.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
2534-86]
gi|417596300|ref|ZP_12246953.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3030-1]
gi|417601665|ref|ZP_12252243.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_94C]
gi|417607553|ref|ZP_12258065.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_DG131-3]
gi|417612477|ref|ZP_12262945.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_EH250]
gi|417617662|ref|ZP_12268090.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
G58-1]
gi|417622809|ref|ZP_12273123.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_H.1.8]
gi|417628315|ref|ZP_12278558.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_MHI813]
gi|417633995|ref|ZP_12284211.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_S1191]
gi|417666464|ref|ZP_12316019.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_O31]
gi|417670448|ref|ZP_12319950.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 155-74]
gi|417682315|ref|ZP_12331672.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
3594-74]
gi|417689123|ref|ZP_12338359.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
5216-82]
gi|417706950|ref|ZP_12355999.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
VA-6]
gi|417712077|ref|ZP_12361071.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-272]
gi|417716663|ref|ZP_12365591.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-227]
gi|417722536|ref|ZP_12371360.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-304]
gi|417727865|ref|ZP_12376591.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-671]
gi|417732971|ref|ZP_12381634.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2747-71]
gi|417738214|ref|ZP_12386807.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
4343-70]
gi|417742857|ref|ZP_12391399.1| hypothetical protein SF293071_1479 [Shigella flexneri 2930-71]
gi|417804641|ref|ZP_12451644.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. LB226692]
gi|417827360|ref|ZP_12473929.1| GTP-binding protein [Shigella flexneri J1713]
gi|417832382|ref|ZP_12478870.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. 01-09591]
gi|417864883|ref|ZP_12509928.1| engD [Escherichia coli O104:H4 str. C227-11]
gi|417944320|ref|ZP_12587563.1| GTP-binding protein YchF [Escherichia coli XH140A]
gi|417976201|ref|ZP_12616996.1| GTP-binding protein YchF [Escherichia coli XH001]
gi|418255188|ref|ZP_12879640.1| GTP-binding protein YchF [Shigella flexneri 6603-63]
gi|418302393|ref|ZP_12914187.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
UMNF18]
gi|418941615|ref|ZP_13494936.1| GTP-binding protein YchF [Escherichia coli O157:H43 str. T22]
gi|418958465|ref|ZP_13510377.1| GTP-binding protein YchF [Escherichia coli J53]
gi|419044881|ref|ZP_13591842.1| GTPase family protein [Escherichia coli DEC3A]
gi|419050379|ref|ZP_13597277.1| GTPase family protein [Escherichia coli DEC3B]
gi|419056550|ref|ZP_13603382.1| GTPase family protein [Escherichia coli DEC3C]
gi|419061953|ref|ZP_13608711.1| GTPase family protein [Escherichia coli DEC3D]
gi|419068626|ref|ZP_13614469.1| GTPase family protein [Escherichia coli DEC3E]
gi|419074670|ref|ZP_13620220.1| GTPase family protein [Escherichia coli DEC3F]
gi|419085653|ref|ZP_13631041.1| GTPase family protein [Escherichia coli DEC4B]
gi|419091698|ref|ZP_13637007.1| GTPase family protein [Escherichia coli DEC4C]
gi|419097621|ref|ZP_13642849.1| GTPase family protein [Escherichia coli DEC4D]
gi|419103420|ref|ZP_13648574.1| GTPase family protein [Escherichia coli DEC4E]
gi|419108849|ref|ZP_13653936.1| GTPase family protein [Escherichia coli DEC4F]
gi|419114175|ref|ZP_13659204.1| GTPase family protein [Escherichia coli DEC5A]
gi|419119819|ref|ZP_13664797.1| GTPase family protein [Escherichia coli DEC5B]
gi|419125487|ref|ZP_13670382.1| GTPase family protein [Escherichia coli DEC5C]
gi|419131040|ref|ZP_13675887.1| GTPase family protein [Escherichia coli DEC5D]
gi|419141836|ref|ZP_13686584.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6A]
gi|419147596|ref|ZP_13692279.1| GTPase family protein [Escherichia coli DEC6B]
gi|419153175|ref|ZP_13697756.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6C]
gi|419158579|ref|ZP_13703093.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6D]
gi|419163675|ref|ZP_13708139.1| GTPase family protein [Escherichia coli DEC6E]
gi|419174908|ref|ZP_13718757.1| GTPase family protein [Escherichia coli DEC7B]
gi|419196397|ref|ZP_13739796.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC8A]
gi|419202553|ref|ZP_13745761.1| GTPase family protein [Escherichia coli DEC8B]
gi|419208797|ref|ZP_13751904.1| GTPase family protein [Escherichia coli DEC8C]
gi|419215024|ref|ZP_13758042.1| GTPase family protein [Escherichia coli DEC8D]
gi|419220709|ref|ZP_13763655.1| GTPase family protein [Escherichia coli DEC8E]
gi|419226193|ref|ZP_13769064.1| GTPase family protein [Escherichia coli DEC9A]
gi|419231824|ref|ZP_13774610.1| GTPase family protein [Escherichia coli DEC9B]
gi|419242730|ref|ZP_13785376.1| GTPase family protein [Escherichia coli DEC9D]
gi|419248477|ref|ZP_13791074.1| GTPase family protein [Escherichia coli DEC9E]
gi|419254346|ref|ZP_13796874.1| GTPase family protein [Escherichia coli DEC10A]
gi|419260472|ref|ZP_13802905.1| GTPase family protein [Escherichia coli DEC10B]
gi|419266342|ref|ZP_13808710.1| GTPase family protein [Escherichia coli DEC10C]
gi|419271979|ref|ZP_13814289.1| GTPase family protein [Escherichia coli DEC10D]
gi|419277477|ref|ZP_13819738.1| GTPase family protein [Escherichia coli DEC10E]
gi|419289028|ref|ZP_13831127.1| GTPase family protein [Escherichia coli DEC11A]
gi|419294301|ref|ZP_13836349.1| GTPase family protein [Escherichia coli DEC11B]
gi|419299652|ref|ZP_13841661.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11C]
gi|419305844|ref|ZP_13847752.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11D]
gi|419310867|ref|ZP_13852737.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11E]
gi|419316186|ref|ZP_13858006.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC12A]
gi|419322196|ref|ZP_13863919.1| GTPase family protein [Escherichia coli DEC12B]
gi|419328270|ref|ZP_13869896.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC12C]
gi|419333937|ref|ZP_13875481.1| GTPase family protein [Escherichia coli DEC12D]
gi|419339139|ref|ZP_13880622.1| GTPase family protein [Escherichia coli DEC12E]
gi|419344821|ref|ZP_13886203.1| GTPase family protein [Escherichia coli DEC13A]
gi|419349259|ref|ZP_13890612.1| GTPase family protein [Escherichia coli DEC13B]
gi|419354421|ref|ZP_13895694.1| GTPase family protein [Escherichia coli DEC13C]
gi|419359647|ref|ZP_13900871.1| GTPase family protein [Escherichia coli DEC13D]
gi|419364684|ref|ZP_13905856.1| GTPase family protein [Escherichia coli DEC13E]
gi|419369514|ref|ZP_13910640.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC14A]
gi|419375060|ref|ZP_13916096.1| GTPase family protein [Escherichia coli DEC14B]
gi|419380263|ref|ZP_13921229.1| GTPase family protein [Escherichia coli DEC14C]
gi|419385606|ref|ZP_13926492.1| GTPase family protein [Escherichia coli DEC14D]
gi|419390997|ref|ZP_13931820.1| GTPase family protein [Escherichia coli DEC15A]
gi|419396060|ref|ZP_13936839.1| GTPase family protein [Escherichia coli DEC15B]
gi|419401440|ref|ZP_13942167.1| GTPase family protein [Escherichia coli DEC15C]
gi|419406626|ref|ZP_13947318.1| GTPase family protein [Escherichia coli DEC15D]
gi|419412129|ref|ZP_13952792.1| GTPase family protein [Escherichia coli DEC15E]
gi|419807319|ref|ZP_14332382.1| GTP-binding protein YchF [Escherichia coli AI27]
gi|419813256|ref|ZP_14338108.1| GTP-binding protein YchF [Escherichia coli O32:H37 str. P4]
gi|419867326|ref|ZP_14389653.1| GTP-binding protein YchF [Escherichia coli O103:H25 str. CVM9340]
gi|419869747|ref|ZP_14391928.1| GTP-binding protein YchF [Escherichia coli O103:H2 str. CVM9450]
gi|419876665|ref|ZP_14398368.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9534]
gi|419879579|ref|ZP_14401011.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9545]
gi|419890156|ref|ZP_14410463.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9570]
gi|419894425|ref|ZP_14414332.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9574]
gi|419903295|ref|ZP_14422388.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM9942]
gi|419910806|ref|ZP_14429316.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10026]
gi|419918331|ref|ZP_14436536.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
KD2]
gi|419925399|ref|ZP_14443239.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
541-15]
gi|419928341|ref|ZP_14446055.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
541-1]
gi|419933427|ref|ZP_14450662.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
576-1]
gi|419940633|ref|ZP_14457359.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
75]
gi|419951748|ref|ZP_14467932.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
CUMT8]
gi|420089973|ref|ZP_14601751.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9602]
gi|420095373|ref|ZP_14606886.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9634]
gi|420104832|ref|ZP_14615457.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9455]
gi|420108273|ref|ZP_14618550.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9553]
gi|420117153|ref|ZP_14626519.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10021]
gi|420120724|ref|ZP_14629911.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10030]
gi|420124839|ref|ZP_14633685.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10224]
gi|420135925|ref|ZP_14643997.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM9952]
gi|420268859|ref|ZP_14771249.1| putative GTP-binding protein [Escherichia coli PA22]
gi|420274797|ref|ZP_14777110.1| putative GTP-binding protein [Escherichia coli PA40]
gi|420279833|ref|ZP_14782091.1| putative GTP-binding protein [Escherichia coli TW06591]
gi|420285858|ref|ZP_14788067.1| putative GTP-binding protein [Escherichia coli TW10246]
gi|420291780|ref|ZP_14793929.1| putative GTP-binding protein [Escherichia coli TW11039]
gi|420297501|ref|ZP_14799576.1| putative GTP-binding protein [Escherichia coli TW09109]
gi|420303588|ref|ZP_14805603.1| putative GTP-binding protein [Escherichia coli TW10119]
gi|420309068|ref|ZP_14811025.1| putative GTP-binding protein [Escherichia coli EC1738]
gi|420313608|ref|ZP_14815514.1| putative GTP-binding protein [Escherichia coli EC1734]
gi|420319832|ref|ZP_14821674.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2850-71]
gi|420324910|ref|ZP_14826682.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
CCH060]
gi|420330587|ref|ZP_14832270.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-1770]
gi|420335536|ref|ZP_14837143.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-315]
gi|420341218|ref|ZP_14842723.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-404]
gi|420346440|ref|ZP_14847857.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
965-58]
gi|420352138|ref|ZP_14853292.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
4444-74]
gi|420371510|ref|ZP_14871905.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
1235-66]
gi|420379713|ref|ZP_14879189.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 225-75]
gi|420390793|ref|ZP_14890057.1| GTPase family protein [Escherichia coli EPEC C342-62]
gi|421681935|ref|ZP_16121755.1| GTPase family protein [Shigella flexneri 1485-80]
gi|421776519|ref|ZP_16213123.1| GTP-binding protein YchF [Escherichia coli AD30]
gi|421811697|ref|ZP_16247467.1| putative GTP-binding protein [Escherichia coli 8.0416]
gi|421817816|ref|ZP_16253353.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
10.0821]
gi|421823385|ref|ZP_16258800.1| putative GTP-binding protein [Escherichia coli FRIK920]
gi|421830182|ref|ZP_16265498.1| putative GTP-binding protein [Escherichia coli PA7]
gi|422334615|ref|ZP_16415621.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
4_1_47FAA]
gi|422354452|ref|ZP_16435187.1| GTP-binding protein YchF [Escherichia coli MS 117-3]
gi|422762754|ref|ZP_16816510.1| GTP-binding protein YchF [Escherichia coli E1167]
gi|422765750|ref|ZP_16819477.1| GTP-binding protein YchF [Escherichia coli E1520]
gi|422770417|ref|ZP_16824108.1| GTP-binding protein YchF [Escherichia coli E482]
gi|422774933|ref|ZP_16828589.1| GTP-binding protein YchF [Escherichia coli H120]
gi|422785766|ref|ZP_16838505.1| GTP-binding protein YchF [Escherichia coli H489]
gi|422790123|ref|ZP_16842828.1| GTP-binding protein YchF [Escherichia coli TA007]
gi|422802780|ref|ZP_16851272.1| GTP-binding protein YchF [Escherichia coli M863]
gi|422817477|ref|ZP_16865691.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
M919]
gi|422831573|ref|ZP_16879714.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
B093]
gi|422836327|ref|ZP_16884374.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
E101]
gi|422971127|ref|ZP_16974639.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
TA124]
gi|422992064|ref|ZP_16982835.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. C227-11]
gi|422994014|ref|ZP_16984778.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. C236-11]
gi|422999193|ref|ZP_16989949.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 09-7901]
gi|423002792|ref|ZP_16993538.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 04-8351]
gi|423009328|ref|ZP_17000066.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-3677]
gi|423023520|ref|ZP_17014223.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4404]
gi|423028668|ref|ZP_17019361.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4522]
gi|423029534|ref|ZP_17020222.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4623]
gi|423037373|ref|ZP_17028047.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423042488|ref|ZP_17033155.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423049179|ref|ZP_17039836.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423052760|ref|ZP_17041568.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423059728|ref|ZP_17048524.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423688801|ref|ZP_17663479.1| putative GTP-binding protein [Escherichia coli PA31]
gi|423702026|ref|ZP_17676485.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H730]
gi|423709187|ref|ZP_17683565.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
B799]
gi|424076712|ref|ZP_17813904.1| putative GTP-binding protein [Escherichia coli FDA505]
gi|424083078|ref|ZP_17819774.1| putative GTP-binding protein [Escherichia coli FDA517]
gi|424089592|ref|ZP_17825718.1| putative GTP-binding protein [Escherichia coli FRIK1996]
gi|424095961|ref|ZP_17831537.1| putative GTP-binding protein [Escherichia coli FRIK1985]
gi|424102324|ref|ZP_17837327.1| putative GTP-binding protein [Escherichia coli FRIK1990]
gi|424109125|ref|ZP_17843550.1| putative GTP-binding protein [Escherichia coli 93-001]
gi|424114864|ref|ZP_17848896.1| putative GTP-binding protein [Escherichia coli PA3]
gi|424121152|ref|ZP_17854698.1| putative GTP-binding protein [Escherichia coli PA5]
gi|424127325|ref|ZP_17860401.1| putative GTP-binding protein [Escherichia coli PA9]
gi|424133464|ref|ZP_17866125.1| putative GTP-binding protein [Escherichia coli PA10]
gi|424140091|ref|ZP_17872205.1| putative GTP-binding protein [Escherichia coli PA14]
gi|424146549|ref|ZP_17878132.1| putative GTP-binding protein [Escherichia coli PA15]
gi|424152560|ref|ZP_17883665.1| putative GTP-binding protein [Escherichia coli PA24]
gi|424213824|ref|ZP_17889115.1| putative GTP-binding protein [Escherichia coli PA25]
gi|424292624|ref|ZP_17895030.1| putative GTP-binding protein [Escherichia coli PA28]
gi|424438900|ref|ZP_17900801.1| putative GTP-binding protein [Escherichia coli PA32]
gi|424455041|ref|ZP_17906411.1| putative GTP-binding protein [Escherichia coli PA33]
gi|424461383|ref|ZP_17912107.1| putative GTP-binding protein [Escherichia coli PA39]
gi|424467829|ref|ZP_17917857.1| putative GTP-binding protein [Escherichia coli PA41]
gi|424474382|ref|ZP_17923903.1| putative GTP-binding protein [Escherichia coli PA42]
gi|424480224|ref|ZP_17929356.1| putative GTP-binding protein [Escherichia coli TW07945]
gi|424486339|ref|ZP_17935064.1| putative GTP-binding protein [Escherichia coli TW09098]
gi|424492640|ref|ZP_17940739.1| putative GTP-binding protein [Escherichia coli TW09195]
gi|424499545|ref|ZP_17946680.1| putative GTP-binding protein [Escherichia coli EC4203]
gi|424505705|ref|ZP_17952342.1| putative GTP-binding protein [Escherichia coli EC4196]
gi|424512093|ref|ZP_17958131.1| putative GTP-binding protein [Escherichia coli TW14313]
gi|424519568|ref|ZP_17963863.1| putative GTP-binding protein [Escherichia coli TW14301]
gi|424525462|ref|ZP_17969352.1| putative GTP-binding protein [Escherichia coli EC4421]
gi|424531639|ref|ZP_17975145.1| putative GTP-binding protein [Escherichia coli EC4422]
gi|424537600|ref|ZP_17980719.1| putative GTP-binding protein [Escherichia coli EC4013]
gi|424543558|ref|ZP_17986205.1| putative GTP-binding protein [Escherichia coli EC4402]
gi|424549859|ref|ZP_17991913.1| putative GTP-binding protein [Escherichia coli EC4439]
gi|424556102|ref|ZP_17997684.1| putative GTP-binding protein [Escherichia coli EC4436]
gi|424562457|ref|ZP_18003611.1| putative GTP-binding protein [Escherichia coli EC4437]
gi|424568512|ref|ZP_18009275.1| putative GTP-binding protein [Escherichia coli EC4448]
gi|424574656|ref|ZP_18014936.1| putative GTP-binding protein [Escherichia coli EC1845]
gi|424580571|ref|ZP_18020384.1| putative GTP-binding protein [Escherichia coli EC1863]
gi|424748882|ref|ZP_18177009.1| GTP-binding protein YchF [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756315|ref|ZP_18184139.1| GTP-binding protein YchF [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768750|ref|ZP_18196009.1| GTP-binding protein YchF [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424837652|ref|ZP_18262289.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri
5a str. M90T]
gi|425097286|ref|ZP_18500187.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3.4870]
gi|425103476|ref|ZP_18505969.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
5.2239]
gi|425109306|ref|ZP_18511420.1| putative GTP-binding protein [Escherichia coli 6.0172]
gi|425114575|ref|ZP_18516391.1| putative GTP-binding protein [Escherichia coli 8.0566]
gi|425119290|ref|ZP_18521003.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.0569]
gi|425125089|ref|ZP_18526491.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.0586]
gi|425131080|ref|ZP_18532058.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.2524]
gi|425139604|ref|ZP_18539986.1| putative GTP-binding protein [Escherichia coli 10.0833]
gi|425143476|ref|ZP_18543601.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
10.0869]
gi|425149441|ref|ZP_18549211.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.0221]
gi|425155226|ref|ZP_18554653.1| putative GTP-binding protein [Escherichia coli PA34]
gi|425161741|ref|ZP_18560783.1| putative GTP-binding protein [Escherichia coli FDA506]
gi|425167344|ref|ZP_18566014.1| putative GTP-binding protein [Escherichia coli FDA507]
gi|425173497|ref|ZP_18571775.1| putative GTP-binding protein [Escherichia coli FDA504]
gi|425179405|ref|ZP_18577319.1| putative GTP-binding protein [Escherichia coli FRIK1999]
gi|425185647|ref|ZP_18583124.1| putative GTP-binding protein [Escherichia coli FRIK1997]
gi|425192431|ref|ZP_18589419.1| putative GTP-binding protein [Escherichia coli NE1487]
gi|425198771|ref|ZP_18595264.1| putative GTP-binding protein [Escherichia coli NE037]
gi|425205376|ref|ZP_18601373.1| putative GTP-binding protein [Escherichia coli FRIK2001]
gi|425211089|ref|ZP_18606691.1| putative GTP-binding protein [Escherichia coli PA4]
gi|425217204|ref|ZP_18612374.1| putative GTP-binding protein [Escherichia coli PA23]
gi|425223744|ref|ZP_18618438.1| putative GTP-binding protein [Escherichia coli PA49]
gi|425229937|ref|ZP_18624197.1| putative GTP-binding protein [Escherichia coli PA45]
gi|425236152|ref|ZP_18630005.1| putative GTP-binding protein [Escherichia coli TT12B]
gi|425242224|ref|ZP_18635721.1| putative GTP-binding protein [Escherichia coli MA6]
gi|425248247|ref|ZP_18641326.1| putative GTP-binding protein [Escherichia coli 5905]
gi|425254098|ref|ZP_18646820.1| putative GTP-binding protein [Escherichia coli CB7326]
gi|425260322|ref|ZP_18652561.1| putative GTP-binding protein [Escherichia coli EC96038]
gi|425266482|ref|ZP_18658261.1| putative GTP-binding protein [Escherichia coli 5412]
gi|425272240|ref|ZP_18663704.1| putative GTP-binding protein [Escherichia coli TW15901]
gi|425277327|ref|ZP_18668628.1| putative GTP-binding protein [Escherichia coli ARS4.2123]
gi|425282790|ref|ZP_18673864.1| putative GTP-binding protein [Escherichia coli TW00353]
gi|425288015|ref|ZP_18678904.1| putative GTP-binding protein [Escherichia coli 3006]
gi|425293962|ref|ZP_18684372.1| putative GTP-binding protein [Escherichia coli PA38]
gi|425304794|ref|ZP_18694547.1| putative GTP-binding protein [Escherichia coli N1]
gi|425310636|ref|ZP_18699972.1| putative GTP-binding protein [Escherichia coli EC1735]
gi|425316556|ref|ZP_18705500.1| putative GTP-binding protein [Escherichia coli EC1736]
gi|425322673|ref|ZP_18711193.1| putative GTP-binding protein [Escherichia coli EC1737]
gi|425328859|ref|ZP_18716928.1| putative GTP-binding protein [Escherichia coli EC1846]
gi|425335027|ref|ZP_18722603.1| putative GTP-binding protein [Escherichia coli EC1847]
gi|425341446|ref|ZP_18728527.1| putative GTP-binding protein [Escherichia coli EC1848]
gi|425347290|ref|ZP_18733959.1| putative GTP-binding protein [Escherichia coli EC1849]
gi|425353530|ref|ZP_18739775.1| putative GTP-binding protein [Escherichia coli EC1850]
gi|425359517|ref|ZP_18745352.1| putative GTP-binding protein [Escherichia coli EC1856]
gi|425365662|ref|ZP_18751046.1| putative GTP-binding protein [Escherichia coli EC1862]
gi|425372097|ref|ZP_18756913.1| putative GTP-binding protein [Escherichia coli EC1864]
gi|425378596|ref|ZP_18762830.1| putative GTP-binding protein [Escherichia coli EC1865]
gi|425384902|ref|ZP_18768637.1| putative GTP-binding protein [Escherichia coli EC1866]
gi|425391602|ref|ZP_18774909.1| putative GTP-binding protein [Escherichia coli EC1868]
gi|425397720|ref|ZP_18780613.1| putative GTP-binding protein [Escherichia coli EC1869]
gi|425403708|ref|ZP_18786158.1| putative GTP-binding protein [Escherichia coli EC1870]
gi|425410242|ref|ZP_18792234.1| putative GTP-binding protein [Escherichia coli NE098]
gi|425416555|ref|ZP_18798024.1| putative GTP-binding protein [Escherichia coli FRIK523]
gi|425421883|ref|ZP_18803076.1| putative GTP-binding protein [Escherichia coli 0.1288]
gi|425427699|ref|ZP_18808580.1| putative GTP-binding protein [Escherichia coli 0.1304]
gi|427804339|ref|ZP_18971406.1| putative GTP-binding protein [Escherichia coli chi7122]
gi|427808923|ref|ZP_18975988.1| putative GTP-binding protein [Escherichia coli]
gi|428946255|ref|ZP_19018745.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.1467]
gi|428952458|ref|ZP_19024430.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.1042]
gi|428959018|ref|ZP_19030400.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
89.0511]
gi|428964776|ref|ZP_19035776.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.0091]
gi|428970763|ref|ZP_19041261.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.0039]
gi|428977915|ref|ZP_19047807.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.2281]
gi|428983665|ref|ZP_19053123.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
93.0055]
gi|428989268|ref|ZP_19058406.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
93.0056]
gi|428995021|ref|ZP_19063802.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
94.0618]
gi|429001231|ref|ZP_19069574.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0183]
gi|429007373|ref|ZP_19075102.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.1288]
gi|429013807|ref|ZP_19080890.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0943]
gi|429019835|ref|ZP_19086496.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0428]
gi|429025680|ref|ZP_19091920.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0427]
gi|429031847|ref|ZP_19097569.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0939]
gi|429038016|ref|ZP_19103311.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0932]
gi|429043981|ref|ZP_19108847.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0107]
gi|429049616|ref|ZP_19114246.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0003]
gi|429054920|ref|ZP_19119354.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.1742]
gi|429060613|ref|ZP_19124708.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0007]
gi|429066432|ref|ZP_19130114.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0672]
gi|429072643|ref|ZP_19135959.1| putative GTP-binding protein [Escherichia coli 99.0678]
gi|429078009|ref|ZP_19141193.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0713]
gi|429723577|ref|ZP_19258459.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429723921|ref|ZP_19258796.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429773656|ref|ZP_19305669.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02030]
gi|429776646|ref|ZP_19308626.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429781870|ref|ZP_19313797.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02092]
gi|429787064|ref|ZP_19318955.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02093]
gi|429792243|ref|ZP_19324095.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02281]
gi|429797456|ref|ZP_19329261.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02318]
gi|429802661|ref|ZP_19334422.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02913]
gi|429809032|ref|ZP_19340744.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-03439]
gi|429813084|ref|ZP_19344764.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-04080]
gi|429818290|ref|ZP_19349926.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-03943]
gi|429825589|ref|ZP_19356877.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0109]
gi|429831889|ref|ZP_19362523.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0010]
gi|429912118|ref|ZP_19378074.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917960|ref|ZP_19383900.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922998|ref|ZP_19388919.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429923849|ref|ZP_19389765.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429932742|ref|ZP_19398636.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429934345|ref|ZP_19400235.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429940007|ref|ZP_19405881.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429947646|ref|ZP_19413501.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429950279|ref|ZP_19416127.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429958552|ref|ZP_19424381.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432352337|ref|ZP_19595639.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE2]
gi|432369271|ref|ZP_19612369.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE10]
gi|432391213|ref|ZP_19634071.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE21]
gi|432401487|ref|ZP_19644240.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE26]
gi|432416233|ref|ZP_19658855.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE44]
gi|432425553|ref|ZP_19668061.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE181]
gi|432449522|ref|ZP_19691796.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE193]
gi|432460328|ref|ZP_19702480.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE204]
gi|432475348|ref|ZP_19717353.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE208]
gi|432480605|ref|ZP_19722566.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE210]
gi|432484901|ref|ZP_19726820.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE212]
gi|432488890|ref|ZP_19730773.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE213]
gi|432517288|ref|ZP_19754483.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE228]
gi|432530515|ref|ZP_19767551.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE233]
gi|432533416|ref|ZP_19770406.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE234]
gi|432537385|ref|ZP_19774291.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE235]
gi|432563242|ref|ZP_19799860.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE51]
gi|432579880|ref|ZP_19816310.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE56]
gi|432601712|ref|ZP_19837959.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE66]
gi|432626776|ref|ZP_19862757.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE77]
gi|432630866|ref|ZP_19866806.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE80]
gi|432636444|ref|ZP_19872326.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE81]
gi|432640505|ref|ZP_19876342.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE83]
gi|432660401|ref|ZP_19896051.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE111]
gi|432665592|ref|ZP_19901175.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE116]
gi|432670128|ref|ZP_19905668.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE119]
gi|432674201|ref|ZP_19909686.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE142]
gi|432679664|ref|ZP_19915058.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE143]
gi|432685011|ref|ZP_19920319.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE156]
gi|432691104|ref|ZP_19926341.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE161]
gi|432703794|ref|ZP_19938911.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE171]
gi|432718219|ref|ZP_19953203.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE9]
gi|432736677|ref|ZP_19971447.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE42]
gi|432749654|ref|ZP_19984266.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE29]
gi|432764547|ref|ZP_19998992.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE48]
gi|432770032|ref|ZP_20004384.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE50]
gi|432774364|ref|ZP_20008648.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE54]
gi|432792455|ref|ZP_20026543.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE78]
gi|432798416|ref|ZP_20032440.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE79]
gi|432805300|ref|ZP_20039241.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE91]
gi|432813357|ref|ZP_20047181.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE101]
gi|432831162|ref|ZP_20064743.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE135]
gi|432834253|ref|ZP_20067795.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE136]
gi|432838907|ref|ZP_20072395.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE140]
gi|432849717|ref|ZP_20080860.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE144]
gi|432861010|ref|ZP_20086094.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE146]
gi|432874490|ref|ZP_20093547.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE147]
gi|432880902|ref|ZP_20097437.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE154]
gi|432886060|ref|ZP_20100255.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE158]
gi|432912126|ref|ZP_20118076.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE190]
gi|432933738|ref|ZP_20133406.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE184]
gi|432946479|ref|ZP_20142108.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE196]
gi|432954470|ref|ZP_20146589.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE197]
gi|432960760|ref|ZP_20150880.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE202]
gi|432967323|ref|ZP_20156239.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE203]
gi|433018177|ref|ZP_20206432.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE105]
gi|433032799|ref|ZP_20220560.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE112]
gi|433042686|ref|ZP_20230204.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE117]
gi|433047326|ref|ZP_20234729.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE120]
gi|433052571|ref|ZP_20239788.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE122]
gi|433062434|ref|ZP_20249385.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE125]
gi|433067522|ref|ZP_20254336.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE128]
gi|433091506|ref|ZP_20277798.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE138]
gi|433158196|ref|ZP_20343055.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE177]
gi|433173025|ref|ZP_20357572.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE232]
gi|433177731|ref|ZP_20362173.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE82]
gi|433193209|ref|ZP_20377217.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE90]
gi|433202777|ref|ZP_20386566.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE95]
gi|442590641|ref|ZP_21009400.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442599240|ref|ZP_21016962.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443617295|ref|YP_007381151.1| GTP-binding protein YchF [Escherichia coli APEC O78]
gi|444924182|ref|ZP_21243701.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
09BKT078844]
gi|444930221|ref|ZP_21249331.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0814]
gi|444935460|ref|ZP_21254337.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0815]
gi|444941142|ref|ZP_21259736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0816]
gi|444946660|ref|ZP_21265036.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0839]
gi|444952303|ref|ZP_21270470.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0848]
gi|444957768|ref|ZP_21275706.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1753]
gi|444963011|ref|ZP_21280708.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1775]
gi|444968757|ref|ZP_21286191.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1793]
gi|444974224|ref|ZP_21291443.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1805]
gi|444979736|ref|ZP_21296697.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
ATCC 700728]
gi|444985047|ref|ZP_21301877.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA11]
gi|444990334|ref|ZP_21307037.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA19]
gi|444995540|ref|ZP_21312101.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA13]
gi|445001214|ref|ZP_21317645.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA2]
gi|445006627|ref|ZP_21322930.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA47]
gi|445011807|ref|ZP_21327959.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA48]
gi|445017491|ref|ZP_21333507.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA8]
gi|445023068|ref|ZP_21338953.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
7.1982]
gi|445028236|ref|ZP_21343979.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1781]
gi|445033787|ref|ZP_21349372.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1762]
gi|445039487|ref|ZP_21354915.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA35]
gi|445050287|ref|ZP_21365410.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0083]
gi|445056009|ref|ZP_21370921.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0670]
gi|450242045|ref|ZP_21899781.1| GTP-binding protein YchF [Escherichia coli S17]
gi|452971284|ref|ZP_21969511.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. EC4009]
gi|78100083|sp|P0ABU3.2|ENGD_ECO57 RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|78100086|sp|P0ABU2.2|ENGD_ECOLI RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|78100115|sp|P0ABU4.2|ENGD_SHIFL RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|1787454|gb|AAC74287.1| catalase inhibitor protein; ATPase, K+-dependent,
ribosome-associated [Escherichia coli str. K-12 substr.
MG1655]
gi|4062787|dbj|BAA36061.1| predicted GTP-binding protein [Escherichia coli str. K12 substr.
W3110]
gi|13361173|dbj|BAB35131.1| putative GTP-binding protein [Escherichia coli O157:H7 str. Sakai]
gi|24051506|gb|AAN42819.1| putative GTP-binding protein [Shigella flexneri 2a str. 301]
gi|30040975|gb|AAP16705.1| putative GTP-binding protein [Shigella flexneri 2a str. 2457T]
gi|81240691|gb|ABB61401.1| putative GTP-binding protein [Shigella dysenteriae Sd197]
gi|81245754|gb|ABB66462.1| putative GTP-binding protein [Shigella boydii Sb227]
gi|110614756|gb|ABF03423.1| putative GTP-binding protein [Shigella flexneri 5 str. 8401]
gi|157066388|gb|ABV05643.1| GTP-binding protein EngD [Escherichia coli HS]
gi|157079870|gb|ABV19578.1| GTP-binding protein EngD [Escherichia coli E24377A]
gi|169755358|gb|ACA78057.1| GTP-binding protein YchF [Escherichia coli ATCC 8739]
gi|169888666|gb|ACB02373.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
DH10B]
gi|170518703|gb|ACB16881.1| GTP-binding protein EngD [Escherichia coli SMS-3-5]
gi|187427021|gb|ACD06295.1| GTP-binding protein EngD [Shigella boydii CDC 3083-94]
gi|187767045|gb|EDU30889.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4196]
gi|188015094|gb|EDU53216.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4113]
gi|189000062|gb|EDU69048.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4076]
gi|189356358|gb|EDU74777.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4401]
gi|189360083|gb|EDU78502.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4486]
gi|189365599|gb|EDU84015.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4501]
gi|189372434|gb|EDU90850.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC869]
gi|189375870|gb|EDU94286.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC508]
gi|190901417|gb|EDV61180.1| GTP-binding protein EngD [Escherichia coli B7A]
gi|192925613|gb|EDV80282.1| GTP-binding protein EngD [Escherichia coli E22]
gi|192955516|gb|EDV85996.1| GTP-binding protein EngD [Escherichia coli E110019]
gi|194415870|gb|EDX32136.1| GTP-binding protein EngD [Escherichia coli B171]
gi|194416853|gb|EDX32977.1| GTP-binding protein EngD [Shigella dysenteriae 1012]
gi|194423966|gb|EDX39954.1| GTP-binding protein EngD [Escherichia coli 101-1]
gi|208726745|gb|EDZ76346.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4206]
gi|208733066|gb|EDZ81754.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4045]
gi|208737744|gb|EDZ85427.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4042]
gi|209160238|gb|ACI37671.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4115]
gi|209772608|gb|ACI84616.1| putative GTP-binding protein [Escherichia coli]
gi|209772610|gb|ACI84617.1| putative GTP-binding protein [Escherichia coli]
gi|209772612|gb|ACI84618.1| putative GTP-binding protein [Escherichia coli]
gi|209772614|gb|ACI84619.1| putative GTP-binding protein [Escherichia coli]
gi|209772616|gb|ACI84620.1| putative GTP-binding protein [Escherichia coli]
gi|209911703|dbj|BAG76777.1| putative GTP-binding protein [Escherichia coli SE11]
gi|217318721|gb|EEC27147.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. TW14588]
gi|218351449|emb|CAU97157.1| putative GTP-binding protein [Escherichia coli 55989]
gi|218360525|emb|CAQ98083.1| putative GTP-binding protein [Escherichia coli IAI1]
gi|218369896|emb|CAR17671.1| putative GTP-binding protein [Escherichia coli IAI39]
gi|218431822|emb|CAR12707.1| putative GTP-binding protein [Escherichia coli UMN026]
gi|238862451|gb|ACR64449.1| predicted GTP-binding protein [Escherichia coli BW2952]
gi|254592073|gb|ACT71434.1| predicted GTP-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|257753513|dbj|BAI25015.1| predicted GTP-binding protein [Escherichia coli O26:H11 str. 11368]
gi|257758642|dbj|BAI30139.1| predicted GTP-binding protein [Escherichia coli O103:H2 str. 12009]
gi|257763964|dbj|BAI35459.1| predicted GTP-binding protein [Escherichia coli O111:H- str. 11128]
gi|260449662|gb|ACX40084.1| GTP-binding protein YchF [Escherichia coli DH1]
gi|281600627|gb|ADA73611.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2002017]
gi|284921015|emb|CBG34080.1| GTP-dependent nucleic acid-binding protein [Escherichia coli 042]
gi|290762101|gb|ADD56062.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O55:H7 str. CB9615]
gi|291324338|gb|EFE63760.1| GTP-binding protein YchF [Escherichia coli B088]
gi|291426954|gb|EFE99980.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
FVEC1412]
gi|291434538|gb|EFF07511.1| GTP-binding protein YchF [Escherichia coli B185]
gi|291470058|gb|EFF12542.1| GTP-binding protein YchF [Escherichia coli B354]
gi|298277831|gb|EFI19345.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
FVEC1302]
gi|299877603|gb|EFI85814.1| GTP-binding protein YchF [Escherichia coli MS 196-1]
gi|300317531|gb|EFJ67315.1| GTP-binding protein YchF [Escherichia coli MS 175-1]
gi|300359570|gb|EFJ75440.1| GTP-binding protein YchF [Escherichia coli MS 198-1]
gi|300400366|gb|EFJ83904.1| GTP-binding protein YchF [Escherichia coli MS 69-1]
gi|300412616|gb|EFJ95926.1| GTP-binding protein YchF [Escherichia coli MS 115-1]
gi|300449116|gb|EFK12736.1| GTP-binding protein YchF [Escherichia coli MS 116-1]
gi|300455565|gb|EFK19058.1| GTP-binding protein YchF [Escherichia coli MS 21-1]
gi|300463720|gb|EFK27213.1| GTP-binding protein YchF [Escherichia coli MS 187-1]
gi|300526326|gb|EFK47395.1| GTP-binding protein YchF [Escherichia coli MS 119-7]
gi|300530668|gb|EFK51730.1| GTP-binding protein YchF [Escherichia coli MS 107-1]
gi|301073730|gb|EFK88536.1| GTP-binding protein YchF [Escherichia coli MS 146-1]
gi|306909760|gb|EFN40254.1| GTP-binding protein YchF [Escherichia coli W]
gi|308122198|gb|EFO59460.1| GTP-binding protein YchF [Escherichia coli MS 145-7]
gi|308922923|gb|EFP68437.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 1617]
gi|309701502|emb|CBJ00809.1| GTP-dependent nucleic acid-binding protein [Escherichia coli ETEC
H10407]
gi|310335987|gb|EFQ01187.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
1827-70]
gi|313649392|gb|EFS13823.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2a str. 2457T]
gi|315060454|gb|ADT74781.1| predicted GTP-binding protein [Escherichia coli W]
gi|315135839|dbj|BAJ42998.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DH1]
gi|315615955|gb|EFU96581.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3431]
gi|320174893|gb|EFW50012.1| GTP-binding and nucleic acid-binding protein YchF [Shigella
dysenteriae CDC 74-1112]
gi|320181790|gb|EFW56700.1| GTP-binding and nucleic acid-binding protein YchF [Shigella boydii
ATCC 9905]
gi|320185606|gb|EFW60368.1| GTP-binding and nucleic acid-binding protein YchF [Shigella
flexneri CDC 796-83]
gi|320187995|gb|EFW62662.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. EC1212]
gi|320199242|gb|EFW73833.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
EC4100B]
gi|320637355|gb|EFX07162.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. G5101]
gi|320643217|gb|EFX12418.1| GTP-binding protein YchF [Escherichia coli O157:H- str. 493-89]
gi|320648154|gb|EFX16830.1| GTP-binding protein YchF [Escherichia coli O157:H- str. H 2687]
gi|320653988|gb|EFX22062.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659467|gb|EFX27036.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. USDA 5905]
gi|320664604|gb|EFX31755.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. LSU-61]
gi|323153199|gb|EFZ39461.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
EPECa14]
gi|323162272|gb|EFZ48130.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
E128010]
gi|323172444|gb|EFZ58081.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
LT-68]
gi|323179282|gb|EFZ64852.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
OK1180]
gi|323185635|gb|EFZ70996.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
OK1357]
gi|323187433|gb|EFZ72742.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
RN587/1]
gi|323378982|gb|ADX51250.1| GTP-binding protein YchF [Escherichia coli KO11FL]
gi|323937924|gb|EGB34188.1| GTP-binding protein YchF [Escherichia coli E1520]
gi|323942482|gb|EGB38650.1| GTP-binding protein YchF [Escherichia coli E482]
gi|323947514|gb|EGB43518.1| GTP-binding protein YchF [Escherichia coli H120]
gi|323962781|gb|EGB58359.1| GTP-binding protein YchF [Escherichia coli H489]
gi|323964701|gb|EGB60172.1| GTP-binding protein YchF [Escherichia coli M863]
gi|323973399|gb|EGB68586.1| GTP-binding protein YchF [Escherichia coli TA007]
gi|324017547|gb|EGB86766.1| GTP-binding protein YchF [Escherichia coli MS 117-3]
gi|324117249|gb|EGC11156.1| GTP-binding protein YchF [Escherichia coli E1167]
gi|326342751|gb|EGD66521.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. 1044]
gi|326346396|gb|EGD70133.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O157:H7 str. 1125]
gi|327253893|gb|EGE65522.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_7v]
gi|331038530|gb|EGI10750.1| GTP-binding protein YchF [Escherichia coli H736]
gi|331061028|gb|EGI32992.1| GTP-binding protein YchF [Escherichia coli TA143]
gi|331065172|gb|EGI37067.1| GTP-binding protein YchF [Escherichia coli TA271]
gi|331069959|gb|EGI41328.1| GTP-binding protein YchF [Escherichia coli TA280]
gi|331075672|gb|EGI46970.1| GTP-binding protein YchF [Escherichia coli H591]
gi|332092243|gb|EGI97320.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
5216-82]
gi|332094797|gb|EGI99841.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
3594-74]
gi|332097828|gb|EGJ02801.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 155-74]
gi|332101959|gb|EGJ05305.1| translation-associated GTPase [Shigella sp. D9]
gi|332342785|gb|AEE56119.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UMNK88]
gi|332757856|gb|EGJ88183.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
4343-70]
gi|332759373|gb|EGJ89681.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2747-71]
gi|332760297|gb|EGJ90587.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-671]
gi|332767437|gb|EGJ97631.1| hypothetical protein SF293071_1479 [Shigella flexneri 2930-71]
gi|333005042|gb|EGK24562.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
VA-6]
gi|333007536|gb|EGK27014.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-272]
gi|333019223|gb|EGK38510.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-304]
gi|333019916|gb|EGK39188.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-227]
gi|335576174|gb|EGM62432.1| GTP-binding protein [Shigella flexneri J1713]
gi|338770738|gb|EGP25496.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PCN033]
gi|339414491|gb|AEJ56163.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
UMNF18]
gi|340734945|gb|EGR64035.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. 01-09591]
gi|340740883|gb|EGR75061.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. LB226692]
gi|341918172|gb|EGT67786.1| engD [Escherichia coli O104:H4 str. C227-11]
gi|342363878|gb|EGU27982.1| GTP-binding protein YchF [Escherichia coli XH140A]
gi|342927460|gb|EGU96182.1| GTP-binding protein YchF [Escherichia coli MS 79-10]
gi|344194237|gb|EGV48312.1| GTP-binding protein YchF [Escherichia coli XH001]
gi|345339284|gb|EGW71710.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_C165-02]
gi|345342179|gb|EGW74577.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_B2F1]
gi|345343348|gb|EGW75736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
2534-86]
gi|345352268|gb|EGW84518.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_94C]
gi|345357010|gb|EGW89209.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3030-1]
gi|345361599|gb|EGW93758.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_DG131-3]
gi|345364429|gb|EGW96554.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_EH250]
gi|345376130|gb|EGX08075.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_MHI813]
gi|345379799|gb|EGX11707.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
G58-1]
gi|345381443|gb|EGX13323.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_H.1.8]
gi|345389302|gb|EGX19108.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_S1191]
gi|349737486|gb|AEQ12192.1| putative GTP-binding protein [Escherichia coli O7:K1 str. CE10]
gi|354857297|gb|EHF17753.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. C227-11]
gi|354865089|gb|EHF25518.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. C236-11]
gi|354871868|gb|EHF32265.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 04-8351]
gi|354875370|gb|EHF35736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 09-7901]
gi|354877618|gb|EHF37977.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4404]
gi|354882442|gb|EHF42766.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4522]
gi|354883150|gb|EHF43472.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-3677]
gi|354899451|gb|EHF59600.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354901274|gb|EHF61402.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4623]
gi|354902928|gb|EHF63041.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354905121|gb|EHF65206.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354916348|gb|EHF76322.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354921511|gb|EHF81436.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|359331821|dbj|BAL38268.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
MDS42]
gi|371598992|gb|EHN87783.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
TA124]
gi|371601569|gb|EHN90304.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
B093]
gi|371609315|gb|EHN97855.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
E101]
gi|373244421|gb|EHP63906.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
4_1_47FAA]
gi|374358329|gb|AEZ40036.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. RM12579]
gi|375323070|gb|EHS68794.1| GTP-binding protein YchF [Escherichia coli O157:H43 str. T22]
gi|377897682|gb|EHU62058.1| GTPase family protein [Escherichia coli DEC3A]
gi|377898166|gb|EHU62527.1| GTPase family protein [Escherichia coli DEC3B]
gi|377909238|gb|EHU73441.1| GTPase family protein [Escherichia coli DEC3C]
gi|377914800|gb|EHU78921.1| GTPase family protein [Escherichia coli DEC3D]
gi|377916654|gb|EHU80731.1| GTPase family protein [Escherichia coli DEC3E]
gi|377927283|gb|EHU91199.1| GTPase family protein [Escherichia coli DEC3F]
gi|377935242|gb|EHU99052.1| GTPase family protein [Escherichia coli DEC4B]
gi|377947085|gb|EHV10754.1| GTPase family protein [Escherichia coli DEC4C]
gi|377947592|gb|EHV11258.1| GTPase family protein [Escherichia coli DEC4D]
gi|377952025|gb|EHV15627.1| GTPase family protein [Escherichia coli DEC4E]
gi|377961936|gb|EHV25400.1| GTPase family protein [Escherichia coli DEC4F]
gi|377963876|gb|EHV27316.1| GTPase family protein [Escherichia coli DEC5A]
gi|377971462|gb|EHV34819.1| GTPase family protein [Escherichia coli DEC5B]
gi|377977752|gb|EHV41035.1| GTPase family protein [Escherichia coli DEC5C]
gi|377979611|gb|EHV42888.1| GTPase family protein [Escherichia coli DEC5D]
gi|377997492|gb|EHV60596.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6A]
gi|377998615|gb|EHV61706.1| GTPase family protein [Escherichia coli DEC6B]
gi|378001862|gb|EHV64919.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6C]
gi|378011508|gb|EHV74451.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC6D]
gi|378013248|gb|EHV76168.1| GTPase family protein [Escherichia coli DEC6E]
gi|378035787|gb|EHV98340.1| GTPase family protein [Escherichia coli DEC7B]
gi|378050218|gb|EHW12548.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC8A]
gi|378053625|gb|EHW15920.1| GTPase family protein [Escherichia coli DEC8B]
gi|378057906|gb|EHW20127.1| GTPase family protein [Escherichia coli DEC8C]
gi|378065765|gb|EHW27907.1| GTPase family protein [Escherichia coli DEC8D]
gi|378069810|gb|EHW31894.1| GTPase family protein [Escherichia coli DEC8E]
gi|378077725|gb|EHW39718.1| GTPase family protein [Escherichia coli DEC9A]
gi|378080585|gb|EHW42546.1| GTPase family protein [Escherichia coli DEC9B]
gi|378093376|gb|EHW55189.1| GTPase family protein [Escherichia coli DEC9D]
gi|378098219|gb|EHW59961.1| GTPase family protein [Escherichia coli DEC9E]
gi|378103003|gb|EHW64674.1| GTPase family protein [Escherichia coli DEC10A]
gi|378110156|gb|EHW71752.1| GTPase family protein [Escherichia coli DEC10B]
gi|378114519|gb|EHW76071.1| GTPase family protein [Escherichia coli DEC10C]
gi|378119846|gb|EHW81334.1| GTPase family protein [Escherichia coli DEC10D]
gi|378132646|gb|EHW93998.1| GTPase family protein [Escherichia coli DEC10E]
gi|378133461|gb|EHW94806.1| GTPase family protein [Escherichia coli DEC11A]
gi|378143250|gb|EHX04442.1| GTPase family protein [Escherichia coli DEC11B]
gi|378151089|gb|EHX12202.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11D]
gi|378154035|gb|EHX15112.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11C]
gi|378159465|gb|EHX20469.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC11E]
gi|378171119|gb|EHX31991.1| GTPase family protein [Escherichia coli DEC12B]
gi|378172879|gb|EHX33726.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC12A]
gi|378174372|gb|EHX35198.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC12C]
gi|378186150|gb|EHX46773.1| GTPase family protein [Escherichia coli DEC12D]
gi|378189249|gb|EHX49843.1| GTPase family protein [Escherichia coli DEC13A]
gi|378192673|gb|EHX53228.1| GTPase family protein [Escherichia coli DEC12E]
gi|378204921|gb|EHX65337.1| GTPase family protein [Escherichia coli DEC13B]
gi|378205709|gb|EHX66118.1| GTPase family protein [Escherichia coli DEC13C]
gi|378206040|gb|EHX66446.1| GTPase family protein [Escherichia coli DEC13D]
gi|378216505|gb|EHX76792.1| GTPase family protein [Escherichia coli DEC13E]
gi|378221189|gb|EHX81440.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC14A]
gi|378222706|gb|EHX82941.1| GTPase family protein [Escherichia coli DEC14B]
gi|378230812|gb|EHX90926.1| GTPase family protein [Escherichia coli DEC14C]
gi|378233885|gb|EHX93968.1| GTPase family protein [Escherichia coli DEC14D]
gi|378240033|gb|EHY00010.1| GTPase family protein [Escherichia coli DEC15A]
gi|378248398|gb|EHY08312.1| GTPase family protein [Escherichia coli DEC15B]
gi|378249094|gb|EHY09004.1| GTPase family protein [Escherichia coli DEC15C]
gi|378255751|gb|EHY15606.1| GTPase family protein [Escherichia coli DEC15D]
gi|378260317|gb|EHY20122.1| GTPase family protein [Escherichia coli DEC15E]
gi|383103272|gb|AFG40781.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
P12b]
gi|383393372|gb|AFH18330.1| GTP-binding protein YchF [Escherichia coli KO11FL]
gi|383404684|gb|AFH10927.1| GTP-binding protein YchF [Escherichia coli W]
gi|383466704|gb|EID61725.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri
5a str. M90T]
gi|384378679|gb|EIE36558.1| GTP-binding protein YchF [Escherichia coli J53]
gi|384469667|gb|EIE53815.1| GTP-binding protein YchF [Escherichia coli AI27]
gi|385153864|gb|EIF15888.1| GTP-binding protein YchF [Escherichia coli O32:H37 str. P4]
gi|385538984|gb|EIF85826.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
M919]
gi|385706894|gb|EIG43932.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
B799]
gi|385711429|gb|EIG48388.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H730]
gi|386122667|gb|EIG71276.1| GTP-dependent nucleic acid-binding protein engD [Escherichia sp.
4_1_40B]
gi|386142559|gb|EIG83697.1| GTP-binding protein YchF [Escherichia coli 1.2741]
gi|386145408|gb|EIG91866.1| GTP-binding protein YchF [Escherichia coli 97.0246]
gi|386152968|gb|EIH04257.1| GTP-binding protein YchF [Escherichia coli 5.0588]
gi|386158911|gb|EIH15244.1| GTP-binding protein YchF [Escherichia coli 97.0259]
gi|386164933|gb|EIH26718.1| GTP-binding protein YchF [Escherichia coli 1.2264]
gi|386168916|gb|EIH35432.1| GTP-binding protein YchF [Escherichia coli 96.0497]
gi|386175593|gb|EIH47582.1| GTP-binding protein YchF [Escherichia coli 99.0741]
gi|386180712|gb|EIH58186.1| GTP-binding protein YchF [Escherichia coli 3.2608]
gi|386185390|gb|EIH68116.1| GTP-binding protein YchF [Escherichia coli 93.0624]
gi|386187534|gb|EIH76352.1| GTP-binding protein YchF [Escherichia coli 4.0522]
gi|386197937|gb|EIH92131.1| GTP-binding protein YchF [Escherichia coli JB1-95]
gi|386199941|gb|EIH98932.1| GTP-binding protein YchF [Escherichia coli 96.154]
gi|386203637|gb|EII08155.1| GTP-binding protein YchF [Escherichia coli 5.0959]
gi|386214586|gb|EII25007.1| GTP-binding protein YchF [Escherichia coli 9.0111]
gi|386215607|gb|EII32099.1| GTP-binding protein YchF [Escherichia coli 4.0967]
gi|386226065|gb|EII48387.1| GTP-binding protein YchF [Escherichia coli 2.3916]
gi|386231075|gb|EII58423.1| GTP-binding protein YchF [Escherichia coli 3.3884]
gi|386233409|gb|EII65394.1| GTP-binding protein YchF [Escherichia coli 2.4168]
gi|386238481|gb|EII75416.1| GTP-binding protein YchF [Escherichia coli 3.2303]
gi|386243494|gb|EII85227.1| GTP-binding protein YchF [Escherichia coli 3003]
gi|386256048|gb|EIJ05736.1| GTP-binding protein YchF [Escherichia coli B41]
gi|386258854|gb|EIJ14331.1| GTP-binding protein YchF [Escherichia coli 900105 (10e)]
gi|386795659|gb|AFJ28693.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
Xuzhou21]
gi|388332581|gb|EIK99246.1| GTP-binding protein YchF [Escherichia coli O103:H25 str. CVM9340]
gi|388341353|gb|EIL07464.1| GTP-binding protein YchF [Escherichia coli O103:H2 str. CVM9450]
gi|388343305|gb|EIL09270.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9534]
gi|388355504|gb|EIL20333.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9570]
gi|388363864|gb|EIL27762.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9574]
gi|388370792|gb|EIL34298.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10026]
gi|388371216|gb|EIL34706.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9545]
gi|388371903|gb|EIL35357.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM9942]
gi|388386527|gb|EIL48170.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
541-15]
gi|388391532|gb|EIL52992.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
KD2]
gi|388402613|gb|EIL63183.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
75]
gi|388405749|gb|EIL66169.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
541-1]
gi|388412666|gb|EIL72707.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
576-1]
gi|388413885|gb|EIL73867.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
CUMT8]
gi|390647720|gb|EIN26568.1| putative GTP-binding protein [Escherichia coli FRIK1996]
gi|390648195|gb|EIN26954.1| putative GTP-binding protein [Escherichia coli FDA517]
gi|390648591|gb|EIN27266.1| putative GTP-binding protein [Escherichia coli FDA505]
gi|390666484|gb|EIN43645.1| putative GTP-binding protein [Escherichia coli 93-001]
gi|390668408|gb|EIN45227.1| putative GTP-binding protein [Escherichia coli FRIK1985]
gi|390668530|gb|EIN45326.1| putative GTP-binding protein [Escherichia coli FRIK1990]
gi|390685407|gb|EIN60886.1| putative GTP-binding protein [Escherichia coli PA3]
gi|390687504|gb|EIN62699.1| putative GTP-binding protein [Escherichia coli PA5]
gi|390687928|gb|EIN63067.1| putative GTP-binding protein [Escherichia coli PA9]
gi|390704948|gb|EIN78762.1| putative GTP-binding protein [Escherichia coli PA10]
gi|390705781|gb|EIN79452.1| putative GTP-binding protein [Escherichia coli PA15]
gi|390706451|gb|EIN80004.1| putative GTP-binding protein [Escherichia coli PA14]
gi|390717731|gb|EIN90507.1| putative GTP-binding protein [Escherichia coli PA22]
gi|390729933|gb|EIO02057.1| putative GTP-binding protein [Escherichia coli PA24]
gi|390730266|gb|EIO02325.1| putative GTP-binding protein [Escherichia coli PA25]
gi|390731857|gb|EIO03657.1| putative GTP-binding protein [Escherichia coli PA28]
gi|390748291|gb|EIO18747.1| putative GTP-binding protein [Escherichia coli PA31]
gi|390748533|gb|EIO18944.1| putative GTP-binding protein [Escherichia coli PA32]
gi|390750302|gb|EIO20404.1| putative GTP-binding protein [Escherichia coli PA33]
gi|390760058|gb|EIO29400.1| putative GTP-binding protein [Escherichia coli PA40]
gi|390772495|gb|EIO41034.1| putative GTP-binding protein [Escherichia coli PA41]
gi|390773804|gb|EIO42130.1| putative GTP-binding protein [Escherichia coli PA42]
gi|390774624|gb|EIO42800.1| putative GTP-binding protein [Escherichia coli PA39]
gi|390783874|gb|EIO51459.1| putative GTP-binding protein [Escherichia coli TW06591]
gi|390792718|gb|EIO60066.1| putative GTP-binding protein [Escherichia coli TW10246]
gi|390799796|gb|EIO66924.1| putative GTP-binding protein [Escherichia coli TW11039]
gi|390800604|gb|EIO67693.1| putative GTP-binding protein [Escherichia coli TW07945]
gi|390809595|gb|EIO76379.1| putative GTP-binding protein [Escherichia coli TW09109]
gi|390815365|gb|EIO81899.1| putative GTP-binding protein [Escherichia coli TW09098]
gi|390817650|gb|EIO84070.1| putative GTP-binding protein [Escherichia coli TW10119]
gi|390833447|gb|EIO98480.1| putative GTP-binding protein [Escherichia coli EC4203]
gi|390835192|gb|EIO99976.1| putative GTP-binding protein [Escherichia coli TW09195]
gi|390836673|gb|EIP01168.1| putative GTP-binding protein [Escherichia coli EC4196]
gi|390852602|gb|EIP15750.1| putative GTP-binding protein [Escherichia coli TW14301]
gi|390853831|gb|EIP16797.1| putative GTP-binding protein [Escherichia coli TW14313]
gi|390854547|gb|EIP17354.1| putative GTP-binding protein [Escherichia coli EC4421]
gi|390867108|gb|EIP28961.1| putative GTP-binding protein [Escherichia coli EC4422]
gi|390871032|gb|EIP32475.1| putative GTP-binding protein [Escherichia coli EC4013]
gi|390879035|gb|EIP39837.1| putative GTP-binding protein [Escherichia coli EC4402]
gi|390883532|gb|EIP43964.1| putative GTP-binding protein [Escherichia coli EC4439]
gi|390887819|gb|EIP47741.1| putative GTP-binding protein [Escherichia coli EC4436]
gi|390902019|gb|EIP61157.1| putative GTP-binding protein [Escherichia coli EC4437]
gi|390902321|gb|EIP61440.1| putative GTP-binding protein [Escherichia coli EC1738]
gi|390905304|gb|EIP64253.1| putative GTP-binding protein [Escherichia coli EC4448]
gi|390911586|gb|EIP70280.1| putative GTP-binding protein [Escherichia coli EC1734]
gi|390922642|gb|EIP80672.1| putative GTP-binding protein [Escherichia coli EC1863]
gi|390923718|gb|EIP81594.1| putative GTP-binding protein [Escherichia coli EC1845]
gi|391251964|gb|EIQ11168.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
2850-71]
gi|391253950|gb|EIQ13113.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
CCH060]
gi|391255850|gb|EIQ14990.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-1770]
gi|391265169|gb|EIQ24142.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-315]
gi|391270697|gb|EIQ29584.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-404]
gi|391273686|gb|EIQ32509.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
965-58]
gi|391284318|gb|EIQ42916.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii
4444-74]
gi|391303813|gb|EIQ61641.1| GTP-dependent nucleic acid-binding protein engD [Shigella
dysenteriae 225-75]
gi|391313982|gb|EIQ71549.1| GTPase family protein [Escherichia coli EPEC C342-62]
gi|391319178|gb|EIQ76231.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
1235-66]
gi|394386791|gb|EJE64269.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9602]
gi|394393156|gb|EJE69850.1| GTP-binding protein YchF [Escherichia coli O111:H8 str. CVM9634]
gi|394396558|gb|EJE72895.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10224]
gi|394402015|gb|EJE77773.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9455]
gi|394402322|gb|EJE78045.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10021]
gi|394410567|gb|EJE84931.1| GTP-binding protein YchF [Escherichia coli O111:H11 str. CVM9553]
gi|394419301|gb|EJE92915.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM9952]
gi|394428630|gb|EJF01161.1| GTP-binding protein YchF [Escherichia coli O26:H11 str. CVM10030]
gi|397785928|gb|EJK96771.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
STEC_O31]
gi|397899314|gb|EJL15689.1| GTP-binding protein YchF [Shigella flexneri 6603-63]
gi|404291952|gb|EJZ48799.1| GTP-dependent nucleic acid-binding protein engD [Escherichia sp.
1_1_43]
gi|404341144|gb|EJZ67556.1| GTPase family protein [Shigella flexneri 1485-80]
gi|406778174|gb|AFS57598.1| GTP-binding protein YchF [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054757|gb|AFS74808.1| GTP-binding protein YchF [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064908|gb|AFS85955.1| GTP-binding protein YchF [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408069715|gb|EKH04098.1| putative GTP-binding protein [Escherichia coli PA7]
gi|408073958|gb|EKH08260.1| putative GTP-binding protein [Escherichia coli FRIK920]
gi|408082107|gb|EKH16095.1| putative GTP-binding protein [Escherichia coli PA34]
gi|408084954|gb|EKH18659.1| putative GTP-binding protein [Escherichia coli FDA506]
gi|408088055|gb|EKH21447.1| putative GTP-binding protein [Escherichia coli FDA507]
gi|408098316|gb|EKH31111.1| putative GTP-binding protein [Escherichia coli FDA504]
gi|408104669|gb|EKH36940.1| putative GTP-binding protein [Escherichia coli FRIK1999]
gi|408111416|gb|EKH43165.1| putative GTP-binding protein [Escherichia coli FRIK1997]
gi|408115874|gb|EKH47235.1| putative GTP-binding protein [Escherichia coli NE1487]
gi|408124026|gb|EKH54730.1| putative GTP-binding protein [Escherichia coli NE037]
gi|408127924|gb|EKH58355.1| putative GTP-binding protein [Escherichia coli FRIK2001]
gi|408133768|gb|EKH63643.1| putative GTP-binding protein [Escherichia coli PA4]
gi|408146538|gb|EKH75645.1| putative GTP-binding protein [Escherichia coli PA23]
gi|408147314|gb|EKH76295.1| putative GTP-binding protein [Escherichia coli PA49]
gi|408151119|gb|EKH79631.1| putative GTP-binding protein [Escherichia coli PA45]
gi|408162027|gb|EKH89948.1| putative GTP-binding protein [Escherichia coli TT12B]
gi|408166939|gb|EKH94474.1| putative GTP-binding protein [Escherichia coli MA6]
gi|408168605|gb|EKH95986.1| putative GTP-binding protein [Escherichia coli 5905]
gi|408182363|gb|EKI08872.1| putative GTP-binding protein [Escherichia coli CB7326]
gi|408186724|gb|EKI12739.1| putative GTP-binding protein [Escherichia coli 5412]
gi|408187366|gb|EKI13335.1| putative GTP-binding protein [Escherichia coli EC96038]
gi|408195347|gb|EKI20739.1| putative GTP-binding protein [Escherichia coli TW15901]
gi|408204210|gb|EKI29206.1| putative GTP-binding protein [Escherichia coli TW00353]
gi|408204879|gb|EKI29785.1| putative GTP-binding protein [Escherichia coli ARS4.2123]
gi|408216309|gb|EKI40640.1| putative GTP-binding protein [Escherichia coli 3006]
gi|408224659|gb|EKI48364.1| putative GTP-binding protein [Escherichia coli PA38]
gi|408230479|gb|EKI53874.1| putative GTP-binding protein [Escherichia coli N1]
gi|408233264|gb|EKI56398.1| putative GTP-binding protein [Escherichia coli EC1735]
gi|408245033|gb|EKI67428.1| putative GTP-binding protein [Escherichia coli EC1736]
gi|408248004|gb|EKI70107.1| putative GTP-binding protein [Escherichia coli EC1737]
gi|408252912|gb|EKI74531.1| putative GTP-binding protein [Escherichia coli EC1846]
gi|408263331|gb|EKI84192.1| putative GTP-binding protein [Escherichia coli EC1847]
gi|408265995|gb|EKI86648.1| putative GTP-binding protein [Escherichia coli EC1848]
gi|408271617|gb|EKI91739.1| putative GTP-binding protein [Escherichia coli EC1849]
gi|408280797|gb|EKJ00270.1| putative GTP-binding protein [Escherichia coli EC1850]
gi|408282644|gb|EKJ01926.1| putative GTP-binding protein [Escherichia coli EC1856]
gi|408296233|gb|EKJ14483.1| putative GTP-binding protein [Escherichia coli EC1862]
gi|408296858|gb|EKJ15040.1| putative GTP-binding protein [Escherichia coli EC1864]
gi|408302027|gb|EKJ19577.1| putative GTP-binding protein [Escherichia coli EC1865]
gi|408313062|gb|EKJ29758.1| putative GTP-binding protein [Escherichia coli EC1868]
gi|408313216|gb|EKJ29893.1| putative GTP-binding protein [Escherichia coli EC1866]
gi|408327542|gb|EKJ43225.1| putative GTP-binding protein [Escherichia coli EC1869]
gi|408331038|gb|EKJ46240.1| putative GTP-binding protein [Escherichia coli NE098]
gi|408331905|gb|EKJ47021.1| putative GTP-binding protein [Escherichia coli EC1870]
gi|408346135|gb|EKJ60437.1| putative GTP-binding protein [Escherichia coli FRIK523]
gi|408346574|gb|EKJ60869.1| putative GTP-binding protein [Escherichia coli 0.1288]
gi|408351584|gb|EKJ65322.1| putative GTP-binding protein [Escherichia coli 0.1304]
gi|408458549|gb|EKJ82336.1| GTP-binding protein YchF [Escherichia coli AD30]
gi|408555020|gb|EKK31892.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
5.2239]
gi|408555460|gb|EKK32247.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
3.4870]
gi|408555620|gb|EKK32379.1| putative GTP-binding protein [Escherichia coli 6.0172]
gi|408571291|gb|EKK47240.1| putative GTP-binding protein [Escherichia coli 8.0566]
gi|408572246|gb|EKK48167.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.0569]
gi|408577973|gb|EKK53520.1| putative GTP-binding protein [Escherichia coli 10.0833]
gi|408579788|gb|EKK55237.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.0586]
gi|408585042|gb|EKK59946.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
8.2524]
gi|408596907|gb|EKK71001.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
10.0869]
gi|408602726|gb|EKK76421.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.0221]
gi|408603690|gb|EKK77321.1| putative GTP-binding protein [Escherichia coli 8.0416]
gi|408615340|gb|EKK88552.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
10.0821]
gi|412962521|emb|CCK46436.1| putative GTP-binding protein [Escherichia coli chi7122]
gi|412969102|emb|CCJ43730.1| putative GTP-binding protein [Escherichia coli]
gi|421943504|gb|EKU00789.1| GTP-binding protein YchF [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421945724|gb|EKU02918.1| GTP-binding protein YchF [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949770|gb|EKU06690.1| GTP-binding protein YchF [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427209708|gb|EKV79734.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
89.0511]
gi|427211073|gb|EKV80879.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.1042]
gi|427212785|gb|EKV82321.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
88.1467]
gi|427227356|gb|EKV95932.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.2281]
gi|427230676|gb|EKV98835.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.0091]
gi|427230962|gb|EKV99057.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
90.0039]
gi|427245921|gb|EKW13191.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
93.0055]
gi|427247546|gb|EKW14599.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
93.0056]
gi|427249699|gb|EKW16451.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
94.0618]
gi|427266758|gb|EKW32178.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0943]
gi|427266950|gb|EKW32346.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0183]
gi|427268827|gb|EKW33896.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.1288]
gi|427283019|gb|EKW47256.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0428]
gi|427286427|gb|EKW50268.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0427]
gi|427288004|gb|EKW51673.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0939]
gi|427300251|gb|EKW63202.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0932]
gi|427303007|gb|EKW65752.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0003]
gi|427305172|gb|EKW67773.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0107]
gi|427318322|gb|EKW80194.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.1742]
gi|427319568|gb|EKW81377.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0007]
gi|427329541|gb|EKW90866.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0672]
gi|427331736|gb|EKW92935.1| putative GTP-binding protein [Escherichia coli 99.0678]
gi|427331810|gb|EKW93007.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0713]
gi|429257413|gb|EKY41473.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
96.0109]
gi|429258840|gb|EKY42629.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
97.0010]
gi|429355453|gb|EKY92143.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02030]
gi|429359365|gb|EKY96030.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02092]
gi|429363266|gb|EKY99909.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429373613|gb|EKZ10157.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02093]
gi|429377354|gb|EKZ13878.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02281]
gi|429378958|gb|EKZ15465.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02318]
gi|429388242|gb|EKZ24668.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-03439]
gi|429390105|gb|EKZ26521.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-02913]
gi|429393944|gb|EKZ30331.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-03943]
gi|429395247|gb|EKZ31615.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429403931|gb|EKZ40212.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. 11-04080]
gi|429405049|gb|EKZ41316.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429409037|gb|EKZ45271.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429417112|gb|EKZ53263.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421940|gb|EKZ58061.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429423681|gb|EKZ59789.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429425752|gb|EKZ61841.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429432839|gb|EKZ68876.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429442747|gb|EKZ78703.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429447651|gb|EKZ83569.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429452306|gb|EKZ88192.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429454703|gb|EKZ90562.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430880358|gb|ELC03669.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE2]
gi|430887575|gb|ELC10320.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE10]
gi|430921831|gb|ELC42655.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE21]
gi|430926317|gb|ELC46904.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE26]
gi|430942014|gb|ELC62154.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE44]
gi|430957084|gb|ELC75738.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE181]
gi|430981823|gb|ELC98543.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE193]
gi|430989870|gb|ELD06316.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE204]
gi|431007348|gb|ELD22160.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE208]
gi|431009552|gb|ELD24172.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE210]
gi|431017489|gb|ELD30999.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE212]
gi|431022388|gb|ELD35654.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE213]
gi|431052597|gb|ELD62245.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE228]
gi|431055992|gb|ELD65520.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE233]
gi|431062536|gb|ELD71804.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE234]
gi|431070945|gb|ELD79101.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE235]
gi|431096756|gb|ELE02217.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE51]
gi|431107282|gb|ELE11468.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE56]
gi|431142646|gb|ELE44394.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE66]
gi|431164724|gb|ELE65115.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE77]
gi|431172573|gb|ELE72710.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE80]
gi|431173338|gb|ELE73419.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE81]
gi|431182770|gb|ELE82586.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE83]
gi|431202273|gb|ELF00969.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE111]
gi|431202408|gb|ELF01094.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE116]
gi|431212658|gb|ELF10585.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE119]
gi|431216707|gb|ELF14304.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE142]
gi|431223578|gb|ELF20825.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE156]
gi|431223856|gb|ELF21102.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE143]
gi|431228716|gb|ELF25385.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE161]
gi|431245621|gb|ELF39906.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE171]
gi|431265322|gb|ELF57019.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE9]
gi|431285062|gb|ELF75903.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE42]
gi|431298944|gb|ELF88568.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE29]
gi|431312390|gb|ELG00394.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE48]
gi|431317489|gb|ELG05269.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE50]
gi|431319709|gb|ELG07379.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE54]
gi|431341033|gb|ELG28053.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE78]
gi|431344567|gb|ELG31505.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE79]
gi|431355643|gb|ELG42347.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE101]
gi|431356912|gb|ELG43602.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE91]
gi|431379021|gb|ELG64010.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE135]
gi|431387134|gb|ELG71087.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE136]
gi|431390326|gb|ELG74029.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE140]
gi|431401105|gb|ELG84457.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE144]
gi|431403759|gb|ELG87026.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE147]
gi|431407019|gb|ELG90238.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE146]
gi|431413130|gb|ELG95929.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE154]
gi|431417869|gb|ELH00297.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE158]
gi|431442715|gb|ELH23802.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE190]
gi|431455380|gb|ELH35736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE184]
gi|431461854|gb|ELH42121.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE196]
gi|431469768|gb|ELH49697.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE197]
gi|431473295|gb|ELH53129.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE203]
gi|431477967|gb|ELH57729.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE202]
gi|431535017|gb|ELI11403.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE105]
gi|431557610|gb|ELI31314.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE112]
gi|431558889|gb|ELI32472.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE117]
gi|431569818|gb|ELI42754.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE120]
gi|431573858|gb|ELI46648.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE122]
gi|431585374|gb|ELI57325.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE125]
gi|431588242|gb|ELI59529.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE128]
gi|431613047|gb|ELI82252.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE138]
gi|431680453|gb|ELJ46284.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE177]
gi|431694999|gb|ELJ60336.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE232]
gi|431707985|gb|ELJ72511.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE82]
gi|431719277|gb|ELJ83337.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE90]
gi|431724295|gb|ELJ88221.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE95]
gi|441608909|emb|CCP95313.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441651957|emb|CCQ02459.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443421803|gb|AGC86707.1| GTP-binding protein YchF [Escherichia coli APEC O78]
gi|444540942|gb|ELV20532.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0814]
gi|444545499|gb|ELV24384.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
09BKT078844]
gi|444549906|gb|ELV28077.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0815]
gi|444561970|gb|ELV39070.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0839]
gi|444563320|gb|ELV40333.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0816]
gi|444567725|gb|ELV44454.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0848]
gi|444578233|gb|ELV54312.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1753]
gi|444581908|gb|ELV57736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1775]
gi|444583467|gb|ELV59182.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1793]
gi|444597127|gb|ELV72155.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA11]
gi|444597222|gb|ELV72244.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
ATCC 700728]
gi|444601590|gb|ELV76374.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1805]
gi|444610959|gb|ELV85329.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA19]
gi|444610998|gb|ELV85365.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA13]
gi|444619055|gb|ELV93115.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA2]
gi|444628436|gb|ELW02174.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA48]
gi|444629124|gb|ELW02841.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA47]
gi|444633883|gb|ELW07380.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA8]
gi|444643778|gb|ELW16905.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
7.1982]
gi|444646816|gb|ELW19816.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1781]
gi|444649829|gb|ELW22700.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.1762]
gi|444658666|gb|ELW31105.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
PA35]
gi|444670275|gb|ELW42192.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
95.0083]
gi|444672382|gb|ELW44105.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
99.0670]
gi|449323300|gb|EMD13264.1| GTP-binding protein YchF [Escherichia coli S17]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432542638|ref|ZP_19779490.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE236]
gi|432548112|ref|ZP_19784896.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE237]
gi|432621386|ref|ZP_19857425.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE76]
gi|432814826|ref|ZP_20048615.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE115]
gi|431076062|gb|ELD83576.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE236]
gi|431082881|gb|ELD89192.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE237]
gi|431161064|gb|ELE61560.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE76]
gi|431365772|gb|ELG52276.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE115]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKTAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|311279345|ref|YP_003941576.1| GTP-binding protein YchF [Enterobacter cloacae SCF1]
gi|308748540|gb|ADO48292.1| GTP-binding protein YchF [Enterobacter cloacae SCF1]
Length = 363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLEACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|335042007|ref|ZP_08535034.1| putative GTPase, putative translation factor [Methylophaga
aminisulfidivorans MP]
gi|333788621|gb|EGL54503.1| putative GTPase, putative translation factor [Methylophaga
aminisulfidivorans MP]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTIEPN+GI+ VPD R+ L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAQNYPFCTIEPNVGIVPVPDPRMDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++G+++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK I K + ++ + L+LL ++ L+ P+R
Sbjct: 121 PLDDIEVINTELALADLESVEKAITKTTRDAKSGDKTAKARLELLTQMRDELDSGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M + E+L I+ L+LLTIKP +++ANV E+GF+NN LD +K +A +N ++ ICA +
Sbjct: 181 MGFDKEQLALIRDLHLLTIKPTMYIANVSEDGFENNAALDAVKQFAEQENANVVAICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L + +K FL +G E LN +IRA + LL L TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAGLEDDEKVEFLSEIGQDEPGLNRVIRAGYELLGLHTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG+IHTD ++GFIRA ISY DF+ Y GEQG K+AGK R EGK+Y+++DGD+++F
Sbjct: 301 APEGAGVIHTDFQKGFIRAEVISYDDFVQYNGEQGAKDAGKWRLEGKEYVIKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|392551836|ref|ZP_10298973.1| GTP-binding protein YchF [Pseudoalteromonas spongiae UST010723-006]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVAVPDARLDQLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+++ I H++G+I+
Sbjct: 61 QKVLATTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFENENIVHVAGQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ ++ + + KK ++ + L +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMEAADRAVQRNAKKAKGGDKDAKFELVVLEKVKAHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I+++N LTIKP +++ANV ++GF+NN LD+++ A +N ++ +CA++
Sbjct: 181 LELEKEEKAAIQYINFLTIKPTMYIANVNDDGFENNPFLDKVREIAAQENAVVVPVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DKK F+D+LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELDDEDKKEFMDDLGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI + D++ +KGE G K AGK+R EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIGFDDYIEFKGESGAKEAGKMRQEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|26247526|ref|NP_753566.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
CFT073]
gi|91210424|ref|YP_540410.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UTI89]
gi|110641433|ref|YP_669163.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
536]
gi|117623421|ref|YP_852334.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
APEC O1]
gi|191171076|ref|ZP_03032627.1| GTP-binding protein EngD [Escherichia coli F11]
gi|215486435|ref|YP_002328866.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O127:H6 str. E2348/69]
gi|218558132|ref|YP_002391045.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
S88]
gi|218689150|ref|YP_002397362.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
ED1a]
gi|222155997|ref|YP_002556136.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
LF82]
gi|227886375|ref|ZP_04004180.1| GTP-binding protein [Escherichia coli 83972]
gi|237705165|ref|ZP_04535646.1| translation-associated GTPase [Escherichia sp. 3_2_53FAA]
gi|300971928|ref|ZP_07171716.1| GTP-binding protein YchF [Escherichia coli MS 45-1]
gi|300996002|ref|ZP_07181336.1| GTP-binding protein YchF [Escherichia coli MS 200-1]
gi|301046852|ref|ZP_07193969.1| GTP-binding protein YchF [Escherichia coli MS 185-1]
gi|306813899|ref|ZP_07448072.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
NC101]
gi|312966443|ref|ZP_07780665.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
2362-75]
gi|331646521|ref|ZP_08347624.1| GTP-binding protein YchF [Escherichia coli M605]
gi|331657254|ref|ZP_08358216.1| GTP-binding protein YchF [Escherichia coli TA206]
gi|386599052|ref|YP_006100558.1| GTP-binding protein EngD [Escherichia coli IHE3034]
gi|386604790|ref|YP_006111090.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UM146]
gi|386618887|ref|YP_006138467.1| GTP-dependent nucleic acid-binding protein [Escherichia coli NA114]
gi|386628973|ref|YP_006148693.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
str. 'clone D i2']
gi|386633893|ref|YP_006153612.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
str. 'clone D i14']
gi|386638766|ref|YP_006105564.1| GTP-binding protein EngD [Escherichia coli ABU 83972]
gi|387616572|ref|YP_006119594.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O83:H1 str. NRG 857C]
gi|387829232|ref|YP_003349169.1| putative GTP-binding protein [Escherichia coli SE15]
gi|416336169|ref|ZP_11672817.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
WV_060327]
gi|417083875|ref|ZP_11951810.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
cloneA_i1]
gi|417289123|ref|ZP_12076408.1| GTP-binding protein YchF [Escherichia coli TW07793]
gi|417661852|ref|ZP_12311433.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
AA86]
gi|417755200|ref|ZP_12403289.1| GTPase family protein [Escherichia coli DEC2B]
gi|418996236|ref|ZP_13543841.1| GTPase family protein [Escherichia coli DEC1A]
gi|419001550|ref|ZP_13549096.1| GTPase family protein [Escherichia coli DEC1B]
gi|419007031|ref|ZP_13554481.1| GTPase family protein [Escherichia coli DEC1C]
gi|419012989|ref|ZP_13560349.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC1D]
gi|419017843|ref|ZP_13565160.1| GTPase family protein [Escherichia coli DEC1E]
gi|419023482|ref|ZP_13570719.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC2A]
gi|419028286|ref|ZP_13575474.1| GTPase family protein [Escherichia coli DEC2C]
gi|419034185|ref|ZP_13581279.1| GTPase family protein [Escherichia coli DEC2D]
gi|419039087|ref|ZP_13586137.1| GTPase family protein [Escherichia coli DEC2E]
gi|419700087|ref|ZP_14227697.1| GTP-binding protein YchF [Escherichia coli SCI-07]
gi|419915022|ref|ZP_14433399.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
KD1]
gi|419943635|ref|ZP_14460155.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
HM605]
gi|422357597|ref|ZP_16438263.1| GTP-binding protein YchF [Escherichia coli MS 110-3]
gi|422366566|ref|ZP_16447031.1| GTP-binding protein YchF [Escherichia coli MS 153-1]
gi|422370919|ref|ZP_16451304.1| GTP-binding protein YchF [Escherichia coli MS 16-3]
gi|422372936|ref|ZP_16453271.1| GTP-binding protein YchF [Escherichia coli MS 60-1]
gi|422382779|ref|ZP_16462934.1| GTP-binding protein YchF [Escherichia coli MS 57-2]
gi|422751720|ref|ZP_16805628.1| GTP-binding protein YchF [Escherichia coli H252]
gi|422757645|ref|ZP_16811462.1| GTP-binding protein YchF [Escherichia coli H263]
gi|422839713|ref|ZP_16887685.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H397]
gi|425299742|ref|ZP_18689733.1| putative GTP-binding protein [Escherichia coli 07798]
gi|432357564|ref|ZP_19600801.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE4]
gi|432361977|ref|ZP_19605159.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE5]
gi|432380968|ref|ZP_19623916.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE15]
gi|432386724|ref|ZP_19629617.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE16]
gi|432397105|ref|ZP_19639888.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE25]
gi|432406063|ref|ZP_19648781.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE28]
gi|432411346|ref|ZP_19654022.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE39]
gi|432421472|ref|ZP_19664022.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE178]
gi|432431395|ref|ZP_19673831.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE187]
gi|432436543|ref|ZP_19678934.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE188]
gi|432440726|ref|ZP_19683069.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE189]
gi|432445826|ref|ZP_19688129.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE191]
gi|432470589|ref|ZP_19712639.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE206]
gi|432495145|ref|ZP_19736959.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE214]
gi|432499676|ref|ZP_19741439.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE216]
gi|432503971|ref|ZP_19745704.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE220]
gi|432523392|ref|ZP_19760526.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE230]
gi|432553286|ref|ZP_19790015.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE47]
gi|432558334|ref|ZP_19795020.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE49]
gi|432568236|ref|ZP_19804756.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE53]
gi|432573274|ref|ZP_19809762.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE55]
gi|432587513|ref|ZP_19823875.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE58]
gi|432592380|ref|ZP_19828706.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE60]
gi|432597236|ref|ZP_19833514.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE62]
gi|432607112|ref|ZP_19843303.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE67]
gi|432611010|ref|ZP_19847175.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE72]
gi|432645773|ref|ZP_19881567.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE86]
gi|432650678|ref|ZP_19886437.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE87]
gi|432655373|ref|ZP_19891082.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE93]
gi|432694069|ref|ZP_19929278.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE162]
gi|432710231|ref|ZP_19945295.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE6]
gi|432713019|ref|ZP_19948062.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE8]
gi|432722728|ref|ZP_19957651.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE17]
gi|432727316|ref|ZP_19962197.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE18]
gi|432732004|ref|ZP_19966839.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE45]
gi|432741003|ref|ZP_19975724.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE23]
gi|432753990|ref|ZP_19988546.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE22]
gi|432759083|ref|ZP_19993582.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE46]
gi|432778124|ref|ZP_20012371.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE59]
gi|432783176|ref|ZP_20017359.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE63]
gi|432786936|ref|ZP_20021078.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE65]
gi|432801486|ref|ZP_20035468.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE84]
gi|432820495|ref|ZP_20054198.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE118]
gi|432826651|ref|ZP_20060305.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE123]
gi|432843911|ref|ZP_20076965.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE141]
gi|432898080|ref|ZP_20108911.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE192]
gi|432904156|ref|ZP_20113378.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE194]
gi|432918532|ref|ZP_20122873.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE173]
gi|432926307|ref|ZP_20128088.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE175]
gi|432937335|ref|ZP_20135838.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE183]
gi|432971445|ref|ZP_20160318.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE207]
gi|432977900|ref|ZP_20166723.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE209]
gi|432980723|ref|ZP_20169501.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE211]
gi|432984978|ref|ZP_20173707.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE215]
gi|432990315|ref|ZP_20178981.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE217]
gi|432994956|ref|ZP_20183570.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE218]
gi|432999480|ref|ZP_20188013.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE223]
gi|433004701|ref|ZP_20193137.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE227]
gi|433011959|ref|ZP_20200356.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE229]
gi|433013428|ref|ZP_20201799.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE104]
gi|433023071|ref|ZP_20211079.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE106]
gi|433028181|ref|ZP_20216047.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE109]
gi|433038221|ref|ZP_20225830.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE113]
gi|433077379|ref|ZP_20263937.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE131]
gi|433082165|ref|ZP_20268637.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE133]
gi|433086802|ref|ZP_20273193.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE137]
gi|433096090|ref|ZP_20282298.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE139]
gi|433100756|ref|ZP_20286860.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE145]
gi|433105353|ref|ZP_20291365.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE148]
gi|433110478|ref|ZP_20296348.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE150]
gi|433115114|ref|ZP_20300925.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE153]
gi|433124735|ref|ZP_20310317.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE160]
gi|433138795|ref|ZP_20324074.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE167]
gi|433148737|ref|ZP_20333782.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE174]
gi|433153322|ref|ZP_20338284.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE176]
gi|433163018|ref|ZP_20347774.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE179]
gi|433168102|ref|ZP_20352758.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE180]
gi|433187986|ref|ZP_20372098.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE88]
gi|433197840|ref|ZP_20381757.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE94]
gi|433207328|ref|ZP_20391020.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE97]
gi|433212100|ref|ZP_20395708.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE99]
gi|433322621|ref|ZP_20400024.1| GTP-binding protein YchF [Escherichia coli J96]
gi|442607611|ref|ZP_21022376.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
Nissle 1917]
gi|450187861|ref|ZP_21889995.1| GTP-binding protein YchF [Escherichia coli SEPT362]
gi|26107927|gb|AAN80126.1|AE016759_400 Probable GTP-binding protein ychF [Escherichia coli CFT073]
gi|91071998|gb|ABE06879.1| probable GTP-binding protein YchF [Escherichia coli UTI89]
gi|110343025|gb|ABG69262.1| putative GTP-binding protein [Escherichia coli 536]
gi|115512545|gb|ABJ00620.1| putative GTP-binding protein YchF [Escherichia coli APEC O1]
gi|190908808|gb|EDV68396.1| GTP-binding protein EngD [Escherichia coli F11]
gi|215264507|emb|CAS08874.1| predicted GTP-binding protein [Escherichia coli O127:H6 str.
E2348/69]
gi|218364901|emb|CAR02597.1| putative GTP-binding protein [Escherichia coli S88]
gi|218426714|emb|CAR07551.1| putative GTP-binding protein [Escherichia coli ED1a]
gi|222033002|emb|CAP75742.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
LF82]
gi|226899922|gb|EEH86181.1| translation-associated GTPase [Escherichia sp. 3_2_53FAA]
gi|227836579|gb|EEJ47045.1| GTP-binding protein [Escherichia coli 83972]
gi|281178389|dbj|BAI54719.1| putative GTP-binding protein [Escherichia coli SE15]
gi|294491991|gb|ADE90747.1| GTP-binding protein EngD [Escherichia coli IHE3034]
gi|300301220|gb|EFJ57605.1| GTP-binding protein YchF [Escherichia coli MS 185-1]
gi|300304609|gb|EFJ59129.1| GTP-binding protein YchF [Escherichia coli MS 200-1]
gi|300411053|gb|EFJ94591.1| GTP-binding protein YchF [Escherichia coli MS 45-1]
gi|305852536|gb|EFM52984.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
NC101]
gi|307553258|gb|ADN46033.1| GTP-binding protein EngD [Escherichia coli ABU 83972]
gi|307627274|gb|ADN71578.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
UM146]
gi|312288896|gb|EFR16794.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
2362-75]
gi|312945833|gb|ADR26660.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O83:H1 str. NRG 857C]
gi|315288576|gb|EFU47974.1| GTP-binding protein YchF [Escherichia coli MS 110-3]
gi|315290781|gb|EFU50153.1| GTP-binding protein YchF [Escherichia coli MS 153-1]
gi|315297337|gb|EFU56617.1| GTP-binding protein YchF [Escherichia coli MS 16-3]
gi|320195787|gb|EFW70412.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
WV_060327]
gi|323949680|gb|EGB45566.1| GTP-binding protein YchF [Escherichia coli H252]
gi|323953942|gb|EGB49741.1| GTP-binding protein YchF [Escherichia coli H263]
gi|324006008|gb|EGB75227.1| GTP-binding protein YchF [Escherichia coli MS 57-2]
gi|324015647|gb|EGB84866.1| GTP-binding protein YchF [Escherichia coli MS 60-1]
gi|330911070|gb|EGH39580.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
AA86]
gi|331045273|gb|EGI17400.1| GTP-binding protein YchF [Escherichia coli M605]
gi|331055502|gb|EGI27511.1| GTP-binding protein YchF [Escherichia coli TA206]
gi|333969388|gb|AEG36193.1| GTP-dependent nucleic acid-binding protein [Escherichia coli NA114]
gi|355352405|gb|EHG01584.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
cloneA_i1]
gi|355419872|gb|AER84069.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
str. 'clone D i2']
gi|355424792|gb|AER88988.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
str. 'clone D i14']
gi|371608801|gb|EHN97351.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H397]
gi|377846837|gb|EHU11842.1| GTPase family protein [Escherichia coli DEC1A]
gi|377848654|gb|EHU13635.1| GTPase family protein [Escherichia coli DEC1C]
gi|377851805|gb|EHU16741.1| GTPase family protein [Escherichia coli DEC1B]
gi|377860621|gb|EHU25445.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC1D]
gi|377864232|gb|EHU29029.1| GTPase family protein [Escherichia coli DEC1E]
gi|377866607|gb|EHU31373.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC2A]
gi|377877153|gb|EHU41750.1| GTPase family protein [Escherichia coli DEC2B]
gi|377882430|gb|EHU46975.1| GTPase family protein [Escherichia coli DEC2D]
gi|377883150|gb|EHU47679.1| GTPase family protein [Escherichia coli DEC2C]
gi|377896563|gb|EHU60958.1| GTPase family protein [Escherichia coli DEC2E]
gi|380348730|gb|EIA37008.1| GTP-binding protein YchF [Escherichia coli SCI-07]
gi|386247915|gb|EII94088.1| GTP-binding protein YchF [Escherichia coli TW07793]
gi|388384817|gb|EIL46524.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
KD1]
gi|388420530|gb|EIL80221.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
HM605]
gi|408219348|gb|EKI43498.1| putative GTP-binding protein [Escherichia coli 07798]
gi|430878574|gb|ELC01985.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE4]
gi|430888617|gb|ELC11289.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE5]
gi|430908053|gb|ELC29546.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE16]
gi|430909694|gb|ELC31059.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE15]
gi|430916579|gb|ELC37639.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE25]
gi|430931342|gb|ELC51794.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE28]
gi|430936370|gb|ELC56648.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE39]
gi|430945726|gb|ELC65792.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE178]
gi|430954470|gb|ELC73340.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE187]
gi|430963554|gb|ELC81139.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE188]
gi|430967658|gb|ELC85005.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE189]
gi|430974371|gb|ELC91304.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE191]
gi|430998948|gb|ELD15146.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE206]
gi|431026341|gb|ELD39414.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE214]
gi|431030374|gb|ELD43388.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE216]
gi|431040839|gb|ELD51373.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE220]
gi|431053538|gb|ELD63143.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE230]
gi|431086003|gb|ELD92107.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE47]
gi|431093185|gb|ELD98855.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE49]
gi|431101430|gb|ELE06346.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE53]
gi|431109561|gb|ELE13512.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE55]
gi|431121559|gb|ELE24439.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE58]
gi|431131221|gb|ELE33300.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE60]
gi|431131632|gb|ELE33649.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE62]
gi|431139458|gb|ELE41254.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE67]
gi|431149685|gb|ELE50750.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE72]
gi|431181829|gb|ELE81690.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE86]
gi|431192417|gb|ELE91767.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE87]
gi|431193092|gb|ELE92429.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE93]
gi|431235427|gb|ELF30678.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE162]
gi|431250800|gb|ELF44859.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE6]
gi|431258032|gb|ELF50818.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE8]
gi|431267805|gb|ELF59322.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE17]
gi|431275104|gb|ELF66149.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE18]
gi|431277066|gb|ELF68081.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE45]
gi|431285594|gb|ELF76430.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE23]
gi|431304560|gb|ELF93089.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE22]
gi|431310401|gb|ELF98593.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE46]
gi|431329050|gb|ELG16353.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE59]
gi|431330543|gb|ELG17810.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE63]
gi|431340105|gb|ELG27145.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE65]
gi|431349599|gb|ELG36428.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE84]
gi|431369635|gb|ELG55856.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE118]
gi|431373775|gb|ELG59378.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE123]
gi|431395916|gb|ELG79404.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE141]
gi|431428807|gb|ELH10748.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE192]
gi|431433942|gb|ELH15595.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE194]
gi|431445664|gb|ELH26587.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE173]
gi|431446942|gb|ELH27685.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE175]
gi|431465201|gb|ELH45312.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE183]
gi|431481411|gb|ELH61125.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE209]
gi|431484454|gb|ELH64134.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE207]
gi|431493618|gb|ELH73212.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE211]
gi|431497190|gb|ELH76768.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE217]
gi|431502466|gb|ELH81357.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE215]
gi|431509169|gb|ELH87440.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE218]
gi|431511853|gb|ELH89982.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE223]
gi|431516306|gb|ELH93918.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE229]
gi|431516734|gb|ELH94338.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE227]
gi|431533226|gb|ELI09727.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE104]
gi|431538572|gb|ELI14556.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE106]
gi|431544378|gb|ELI19198.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE109]
gi|431553200|gb|ELI27129.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE113]
gi|431599149|gb|ELI68859.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE131]
gi|431604948|gb|ELI74349.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE133]
gi|431608125|gb|ELI77474.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE137]
gi|431618489|gb|ELI87462.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE139]
gi|431621397|gb|ELI90209.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE145]
gi|431629951|gb|ELI98296.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE150]
gi|431631915|gb|ELJ00220.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE148]
gi|431635964|gb|ELJ04132.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE153]
gi|431648415|gb|ELJ15812.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE160]
gi|431663633|gb|ELJ30391.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE167]
gi|431673795|gb|ELJ39985.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE174]
gi|431676636|gb|ELJ42720.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE176]
gi|431690565|gb|ELJ56043.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE179]
gi|431691707|gb|ELJ57159.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE180]
gi|431707375|gb|ELJ71909.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE88]
gi|431724085|gb|ELJ88026.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE94]
gi|431731529|gb|ELJ95029.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE97]
gi|431735335|gb|ELJ98694.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE99]
gi|432348674|gb|ELL43117.1| GTP-binding protein YchF [Escherichia coli J96]
gi|441711083|emb|CCQ08353.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli
Nissle 1917]
gi|449323165|gb|EMD13130.1| GTP-binding protein YchF [Escherichia coli SEPT362]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432893997|ref|ZP_20105958.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE165]
gi|431423339|gb|ELH05466.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE165]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRKIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432583245|ref|ZP_19819653.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE57]
gi|431118372|gb|ELE21392.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE57]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK + + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDNDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSTEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398794535|ref|ZP_10554582.1| GTP-binding protein YchF [Pantoea sp. YR343]
gi|398208540|gb|EJM95261.1| GTP-binding protein YchF [Pantoea sp. YR343]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIQRCQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +E +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLDADEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDDERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ +KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFVAFKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|331652241|ref|ZP_08353260.1| GTP-binding protein YchF [Escherichia coli M718]
gi|331050519|gb|EGI22577.1| GTP-binding protein YchF [Escherichia coli M718]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEHGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|300906890|ref|ZP_07124564.1| GTP-binding protein YchF [Escherichia coli MS 84-1]
gi|301305573|ref|ZP_07211664.1| GTP-binding protein YchF [Escherichia coli MS 124-1]
gi|415864487|ref|ZP_11537557.1| GTP-binding protein YchF [Escherichia coli MS 85-1]
gi|417639080|ref|ZP_12289235.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
TX1999]
gi|419169243|ref|ZP_13713636.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC7A]
gi|419180268|ref|ZP_13723889.1| GTPase family protein [Escherichia coli DEC7C]
gi|419185782|ref|ZP_13729303.1| GTPase family protein [Escherichia coli DEC7D]
gi|419191052|ref|ZP_13734518.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC7E]
gi|420385113|ref|ZP_14884481.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
EPECa12]
gi|433129559|ref|ZP_20315021.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE163]
gi|433134360|ref|ZP_20319726.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE166]
gi|300401323|gb|EFJ84861.1| GTP-binding protein YchF [Escherichia coli MS 84-1]
gi|300839162|gb|EFK66922.1| GTP-binding protein YchF [Escherichia coli MS 124-1]
gi|315254838|gb|EFU34806.1| GTP-binding protein YchF [Escherichia coli MS 85-1]
gi|345394245|gb|EGX24009.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
TX1999]
gi|378017670|gb|EHV80540.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC7A]
gi|378026189|gb|EHV88828.1| GTPase family protein [Escherichia coli DEC7C]
gi|378031206|gb|EHV93794.1| GTPase family protein [Escherichia coli DEC7D]
gi|378041115|gb|EHW03578.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC7E]
gi|391307606|gb|EIQ65337.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
EPECa12]
gi|431649968|gb|ELJ17307.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE163]
gi|431660392|gb|ELJ27266.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE166]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVLPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|283785508|ref|YP_003365373.1| GTP-dependent nucleic acid-binding protein [Citrobacter rodentium
ICC168]
gi|282948962|emb|CBG88565.1| GTP-dependent nucleic acid-binding protein [Citrobacter rodentium
ICC168]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|251784709|ref|YP_002999013.1| putative GTP-binding protein [Escherichia coli BL21(DE3)]
gi|253773798|ref|YP_003036629.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161285|ref|YP_003044393.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli B
str. REL606]
gi|254288093|ref|YP_003053841.1| translation-associated GTPase [Escherichia coli BL21(DE3)]
gi|297516812|ref|ZP_06935198.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
OP50]
gi|242376982|emb|CAQ31705.1| putative GTP-binding protein [Escherichia coli BL21(DE3)]
gi|253324842|gb|ACT29444.1| GTP-binding protein YchF [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973186|gb|ACT38857.1| translation-associated GTPase [Escherichia coli B str. REL606]
gi|253977400|gb|ACT43070.1| translation-associated GTPase [Escherichia coli BL21(DE3)]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK + + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDNDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410635715|ref|ZP_11346323.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
lipolytica E3]
gi|410144798|dbj|GAC13528.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
lipolytica E3]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD+RL L +IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDERLTALADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G +N
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL +EK + + KK + + +K+L++I L++ +R
Sbjct: 121 PQDDIDVINTELALSDLETVEKALLRVAKKAKSGDADAKFEMKVLEKIKPALDEGTLLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N+LT+KP ++VANV E+GF+NN LDQ++ A +N ++ +CA++
Sbjct: 181 VKLEKEELAAISYMNMLTLKPTMYVANVNEDGFENNPYLDQVRAIAEQENAVVVAVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ +K F+ LGL E LN +IRA +SLL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESEIAELDEEEKTEFMQELGLTEPGLNRVIRAGYSLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I Y +++ +KGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVIGYDNYVEFKGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|218549106|ref|YP_002382897.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia
fergusonii ATCC 35469]
gi|218356647|emb|CAQ89273.1| putative GTP-binding protein [Escherichia fergusonii ATCC 35469]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IV+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVEP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEEREEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|197284951|ref|YP_002150823.1| GTP-dependent nucleic acid-binding protein EngD [Proteus mirabilis
HI4320]
gi|227355353|ref|ZP_03839754.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis ATCC
29906]
gi|425067908|ref|ZP_18471024.1| GTP-dependent nucleic acid-binding protein engD [Proteus mirabilis
WGLW6]
gi|425072692|ref|ZP_18475798.1| GTP-dependent nucleic acid-binding protein engD [Proteus mirabilis
WGLW4]
gi|194682438|emb|CAR42329.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis
HI4320]
gi|227164577|gb|EEI49448.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis ATCC
29906]
gi|404596466|gb|EKA96986.1| GTP-dependent nucleic acid-binding protein engD [Proteus mirabilis
WGLW4]
gi|404600646|gb|EKB01076.1| GTP-dependent nucleic acid-binding protein engD [Proteus mirabilis
WGLW6]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRVLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ + + KK ++ + +++L++ + +L K+ +R
Sbjct: 121 PAEDIETINTELALSDLDTCERAMHRNQKKAKGGDKVAKAEMEVLEKCLPHLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSDEEKAIIRYLSFLTLKPTMYIANVNEDGFENNPYLDTVRKIAEAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +++ F+ +LG++E LN +IRA ++LLDL+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEEREEFMQDLGIEEPGLNRVIRAGYALLDLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TISY DF+ Y GEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISYNDFITYGGEQGAKEAGKMRAEGKDYIVQDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|262041843|ref|ZP_06015028.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040835|gb|EEW41921.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L L++ + L + +R
Sbjct: 121 PEEDIDVINTELALSDLDTCERAIHRVSKKAKGGDKDAKVELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTKEEKEAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEQEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|331682692|ref|ZP_08383311.1| GTP-binding protein YchF [Escherichia coli H299]
gi|331080323|gb|EGI51502.1| GTP-binding protein YchF [Escherichia coli H299]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432465215|ref|ZP_19707315.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE205]
gi|433072225|ref|ZP_20258914.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE129]
gi|433119741|ref|ZP_20305441.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE157]
gi|433182712|ref|ZP_20367002.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE85]
gi|430995230|gb|ELD11528.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE205]
gi|431591040|gb|ELI62042.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE129]
gi|431646489|gb|ELJ13982.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE157]
gi|431710264|gb|ELJ74692.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE85]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK + + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDNDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|335424594|ref|ZP_08553602.1| GTP-binding protein YchF [Salinisphaera shabanensis E1L3A]
gi|334888932|gb|EGM27227.1| GTP-binding protein YchF [Salinisphaera shabanensis E1L3A]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+ G++GLPNVGKSTLFNALT +I AENYPFCTI+PN+G++ VPD RL L I
Sbjct: 1 MALQVGIVGLPNVGKSTLFNALTAAEIPAENYPFCTIDPNVGVVSVPDPRLAALAGIANP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K P I+ VDIAGLV+GAS GEGLGN+FLA+IRET+ ++HV+RCF DD + H+SG ++
Sbjct: 61 EKTLPTAIEFVDIAGLVAGASTGEGLGNQFLANIRETDAILHVVRCFDDDDVMHVSGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL + + +D+ K ++ + L +R+ +L+ P+R
Sbjct: 121 PIADIETIDTELALADLTTVTRAVDRSAKAAKSGDKTAKRNFDLFERVRDHLDSGAPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L++++ ++++ L+L+T KP +FVANV E GF+NN LLD++ +A QN P++ +CA L
Sbjct: 181 MALSDDDRLALRELHLITAKPALFVANVDEEGFENNPLLDRVSEHAAGQNAPVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L+ DK FL +LGL+E L+ +IRA++ LL L+T+FTVG KE+RAWT+ G T
Sbjct: 241 EGELAQLDGDDKNEFLADLGLEEPGLDRVIRAAYELLGLQTFFTVGPKEVRAWTVRRGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I Y D++ KGE+G K AG+ R EGK+Y++ +GD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIGYDDYVSLKGEKGAKEAGRQRLEGKEYIMVEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422781987|ref|ZP_16834772.1| GTP-binding protein YchF [Escherichia coli TW10509]
gi|323977226|gb|EGB72313.1| GTP-binding protein YchF [Escherichia coli TW10509]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ +GL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQEIGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|301327081|ref|ZP_07220363.1| GTP-binding protein YchF [Escherichia coli MS 78-1]
gi|418043379|ref|ZP_12681544.1| GTP-binding protein YchF [Escherichia coli W26]
gi|422958636|ref|ZP_16970567.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H494]
gi|450213595|ref|ZP_21894928.1| GTP-binding protein YchF [Escherichia coli O08]
gi|300846334|gb|EFK74094.1| GTP-binding protein YchF [Escherichia coli MS 78-1]
gi|371596465|gb|EHN85303.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
H494]
gi|383473698|gb|EID65712.1| GTP-binding protein YchF [Escherichia coli W26]
gi|449320792|gb|EMD10817.1| GTP-binding protein YchF [Escherichia coli O08]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKVELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398801491|ref|ZP_10560733.1| GTP-binding protein YchF [Pantoea sp. GM01]
gi|398091812|gb|EJL82240.1| GTP-binding protein YchF [Pantoea sp. GM01]
Length = 363
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIQRCQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LKLDADEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDDERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ +KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFVAFKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432372508|ref|ZP_19615553.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE11]
gi|430897001|gb|ELC19228.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE11]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE SI++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKASIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSIVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|37525971|ref|NP_929315.1| translation-associated GTPase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785400|emb|CAE14347.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF +D I H+SG+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFVNDNIIHVSGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL LSDL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAADIEIINTELALSDLDTCERAIHRVQKKAKGGDKEAKAELAALEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSTEEKAAIRYLSFLTLKPTMYIANVNEEGFENNPHLDAVRAIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEDDEREEFMAELGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI ++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIPFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|431930972|ref|YP_007244018.1| GTP-binding protein YchF [Thioflavicoccus mobilis 8321]
gi|431829275|gb|AGA90388.1| GTP-binding protein YchF [Thioflavicoccus mobilis 8321]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I+AENYPFCTI+PN+G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQATIAAENYPFCTIDPNVGVVALPDPRLDVIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+SG ++
Sbjct: 61 QKVIPTTMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDDVVHVSGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK +D+ + ++ + LL+R+ L++ +P+R
Sbjct: 121 PVGDIEVINTELALADLESVEKALDRAVRAAKTGDKRVLGRKALLERVREQLDRGLPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L++E ++ L LLT KP ++VANV E+GF +N LL ++ A ++ ++ +CA +
Sbjct: 181 MGLDDEAREELRDLFLLTAKPTMYVANVAEDGFTDNPLLGAVEALAADEGAEVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ L ++ FL LGL E LN ++RA + LL L TYFTVG KE RAWTIP
Sbjct: 241 EAELVALEEAERADFLAELGLSEPGLNRVVRAGYRLLGLETYFTVGPKEARAWTIPRSAK 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA I Y+DF+ +GEQG K GK+RSEGK Y+V DGD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVIGYEDFVACRGEQGAKEQGKLRSEGKDYVVRDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|300921831|ref|ZP_07137988.1| GTP-binding protein YchF [Escherichia coli MS 182-1]
gi|300421757|gb|EFK05068.1| GTP-binding protein YchF [Escherichia coli MS 182-1]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKVELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKSAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|188495527|ref|ZP_03002797.1| GTP-binding protein YchF [Escherichia coli 53638]
gi|188490726|gb|EDU65829.1| GTP-binding protein YchF [Escherichia coli 53638]
Length = 363
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPN+GKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNIGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429086924|ref|ZP_19149656.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
universalis NCTC 9529]
gi|426506727|emb|CCK14768.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
universalis NCTC 9529]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKELIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEDRDEFMKELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417701408|ref|ZP_12350533.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-218]
gi|333005379|gb|EGK24897.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
K-218]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDVKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|118594521|ref|ZP_01551868.1| hypothetical protein MB2181_02595 [Methylophilales bacterium
HTCC2181]
gi|118440299|gb|EAV46926.1| hypothetical protein MB2181_02595 [Methylophilales bacterium
HTCC2181]
Length = 361
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/361 (55%), Positives = 267/361 (73%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+TK I A NYPFCTIEPN+GI+EVPD R+ L+ IV +K
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITKAGIDANNYPFCTIEPNVGIVEVPDPRIGMLSEIVNPEK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
I PAI++ VDIAGLV GASKGEGLGNKFLA+IRET+ ++HV+RCF DD I H++G+I+PI
Sbjct: 61 IQPAIVEFVDIAGLVEGASKGEGLGNKFLANIRETDAILHVVRCFNDDNIIHVAGKIDPI 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E I TELIL+D+ LEK I KE+KK ++ S L+ + +++ N N+ +
Sbjct: 121 SDIETIHTELILADMETLEKAIQKESKKSKSGDKESKSLIAVYEKLQENFNQGHLAIKLK 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L EE+ IK L L+TIKP++FVANV E+GF+NN LD+LK YA + P++ ICAK+E
Sbjct: 181 LEKEEIFLIKPLCLITIKPMMFVANVDESGFENNKNLDELKRYAEGMDSPVVTICAKIES 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
+IS+L + +K FL + L E LN LIR ++ LL L+TYFT G KE+RAWT G TA
Sbjct: 241 DISELEDEEKLIFLSEMDLVEPGLNRLIREAYKLLGLQTYFTAGVKEVRAWTTKVGATAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
QAAG IHTD ++GFIRA I++ D+L YKGE K AGK++ EGK Y+V+DGD+++F FN
Sbjct: 301 QAAGEIHTDFEKGFIRAEVIAFDDYLSYKGEAKSKEAGKMKLEGKDYIVKDGDVMHFRFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|407803841|ref|ZP_11150673.1| GTP-binding protein YchF [Alcanivorax sp. W11-5]
gi|407022251|gb|EKE34006.1| GTP-binding protein YchF [Alcanivorax sp. W11-5]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A+N+PFCTIEPN G++ VPD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAQNFPFCTIEPNTGMVPVPDPRLEKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF DD I H++G+++
Sbjct: 61 ERILPATMEFVDIAGLVAGASQGEGLGNKFLANIRETDAIAHVVRCFDDDNIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL +EK + K +++ + L+ +L +++ L+ P R
Sbjct: 121 PLDDIDTINTELALADLDSVEKAHLRAAKAAKGQDKDAAALVTVLDKLLPALSDGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+++EL ++ NLLT+KP +++ANV E+GF+NN LLD ++ A ++ ++ ICAK+
Sbjct: 181 VALSDDELKRVRSYNLLTLKPTMYIANVTEDGFENNALLDAVRALAESEGAGVVAICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +G+ E LN +IRA ++LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKADFLSEMGMDEPGLNRVIRAGYNLLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++AG+IHTD ++GFIRA I Y D++ + GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAGVIHTDFEKGFIRAEVIGYDDYIQHNGEQGAKDAGKWRLEGKDYVVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|377578901|ref|ZP_09807875.1| ribosome-associated ATPase YchF [Escherichia hermannii NBRC 105704]
gi|377539762|dbj|GAB53040.1| ribosome-associated ATPase YchF [Escherichia hermannii NBRC 105704]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIDVINTELALSDLETCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LG++E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|110833376|ref|YP_692235.1| GTP-dependent nucleic acid-binding protein EngD [Alcanivorax
borkumensis SK2]
gi|110646487|emb|CAL15963.1| GTP-binding protein YchF [Alcanivorax borkumensis SK2]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPVPDPRLDKLEAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ + H+SG+++
Sbjct: 61 ERVLPATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDENVIHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VI TEL L+DL +EK + K +++ + LL +L +++ LN+ P R
Sbjct: 121 PLDDIAVINTELALADLDTVEKAHFRATKAAKGQDKDAKGLLPVLDKVLPALNEGDPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++E +IK LNLLT+KP +++ANV E GF++N LLD ++ A +N ++ ICAK+
Sbjct: 181 VELTDDERKAIKSLNLLTLKPTMYIANVDEGGFEDNALLDAVRDLAEKENSSVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA F LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKADFLADLGMEEPGLNRVIRAGFDLLGLQTYFTAGVKEVRAWTVRVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA Y+D++ GEQG K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTGYEDYIANNGEQGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429085875|ref|ZP_19148831.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
condimenti 1330]
gi|426544887|emb|CCJ74872.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
condimenti 1330]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKELIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMKELGLEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254429140|ref|ZP_05042847.1| GTP-binding protein YchF [Alcanivorax sp. DG881]
gi|196195309|gb|EDX90268.1| GTP-binding protein YchF [Alcanivorax sp. DG881]
Length = 363
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD RL L+ IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPVPDPRLDKLSAIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ + H+SG+++
Sbjct: 61 ERVMPATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDENVIHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D VI TEL L+DL +EK + K +++ + LL +L +++ LN+ P R
Sbjct: 121 PLDDIAVINTELALADLDTVEKAHLRATKAAKGQDKDAKGLLPVLDKVLPALNEGDPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++E +IK LNLLT+KP +++ANV E GF++N LLD ++ A +N ++ ICAK+
Sbjct: 181 VELTDDERKAIKSLNLLTLKPTMYIANVDEGGFEDNALLDAVRELAEKENSSVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA F LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKADFLADLGMEEPGLNRVIRAGFDLLGLQTYFTAGVKEVRAWTVRVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA Y D++ GEQG K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTGYDDYIDNNGEQGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|419135933|ref|ZP_13680736.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC5E]
gi|377985957|gb|EHV49162.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
DEC5E]
Length = 363
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ NV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIPNVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|157145515|ref|YP_001452834.1| GTP-dependent nucleic acid-binding protein EngD [Citrobacter koseri
ATCC BAA-895]
gi|157082720|gb|ABV12398.1| hypothetical protein CKO_01258 [Citrobacter koseri ATCC BAA-895]
Length = 363
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIADAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRDEFMAELGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|300723042|ref|YP_003712340.1| GTP-binding protein with nucleoside triP hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
gi|297629557|emb|CBJ90160.1| putative GTP-binding protein with nucleoside triP hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
Length = 363
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL LSDL E+ I + KK ++ + L+ L++ + +L ++ +R
Sbjct: 121 PATDIDIINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E GF++N LD ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEGGFEDNPYLDTVRAIAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +GL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRDEFMAEMGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRAEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|317048564|ref|YP_004116212.1| GTP-binding protein YchF [Pantoea sp. At-9b]
gi|316950181|gb|ADU69656.1| GTP-binding protein YchF [Pantoea sp. At-9b]
Length = 363
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFL +IRET+ + HV+RCF+++ I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVEGASKGEGLGNKFLTNIRETDAIGHVVRCFENENIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIDIINTELALSDLDTCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLDADEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIADAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ +GL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDDERAEFMAEMGLEEPGLNRVIRAGYTLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|432456227|ref|ZP_19698421.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE201]
gi|433057537|ref|ZP_20244614.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE124]
gi|430983748|gb|ELD00404.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE201]
gi|431572676|gb|ELI45501.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli
KTE124]
Length = 363
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 TPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|74312457|ref|YP_310876.1| GTP-dependent nucleic acid-binding protein EngD [Shigella sonnei
Ss046]
gi|383178869|ref|YP_005456874.1| GTP-binding protein YchF [Shigella sonnei 53G]
gi|414576442|ref|ZP_11433628.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
3233-85]
gi|415844894|ref|ZP_11524598.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
53G]
gi|418266204|ref|ZP_12885780.1| GTPase family protein [Shigella sonnei str. Moseley]
gi|420358975|ref|ZP_14859951.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
3226-85]
gi|420363672|ref|ZP_14864560.1| GTPase family protein [Shigella sonnei 4822-66]
gi|73855934|gb|AAZ88641.1| putative GTP-binding protein [Shigella sonnei Ss046]
gi|323168373|gb|EFZ54054.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
53G]
gi|391282576|gb|EIQ41206.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
3226-85]
gi|391285513|gb|EIQ44092.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei
3233-85]
gi|391294276|gb|EIQ52508.1| GTPase family protein [Shigella sonnei 4822-66]
gi|397900104|gb|EJL16471.1| GTPase family protein [Shigella sonnei str. Moseley]
Length = 363
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IR + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRVGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386828532|ref|ZP_10115639.1| GTP-binding protein YchF [Beggiatoa alba B18LD]
gi|386429416|gb|EIJ43244.1| GTP-binding protein YchF [Beggiatoa alba B18LD]
Length = 363
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT I AENYPFCTI+PN+G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTNANIQAENYPFCTIDPNVGVVAMPDVRLDALATIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVLPTSMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFENDDIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ +++ + + K N+ ++ L +R+ L+ +R
Sbjct: 121 PLADIEVIHTELALADMDTVDRALQRVAKNCKSGNKEALAQKSLFERLFAQLDAGKAVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SLN EE IK L+LLT KP +++ANV E+GF+NN LDQ++ A +N ++ +CAK
Sbjct: 181 LSLNEEEQQWIKELHLLTAKPTVYIANVNEDGFENNPYLDQVRQLAEQENAVVVPVCAKT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ L+ +++ FL +G+ E LN +I A + LL L+TYFT G+KE+RAWT+ G T
Sbjct: 241 ESELVALDAEERQEFLQEMGMDEPGLNRVIHAGYRLLGLQTYFTAGEKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA I+Y DF+ YKGEQG K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAAVIHTDFEKGFIRAEVIAYNDFVAYKGEQGAKEAGKWRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|366157470|ref|ZP_09457332.1| GTP-binding protein YchF [Escherichia sp. TW09308]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSIVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|388457342|ref|ZP_10139637.1| GTP-binding protein YchF [Fluoribacter dumoffii Tex-KL]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL L++IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDPRLDALSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAG+V GASKGEGLGN+FLA+IRET+ + HV+RCF++ + H+ G+++
Sbjct: 61 QQVLPATMQFVDIAGIVKGASKGEGLGNQFLANIRETDAIAHVVRCFENTDVVHVEGKVH 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK I K K N+ +I +K L++I +L++ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKAILKAGKNSRSGNKEAIFEMKTLEKIKAHLDEGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE + L LLT KP++++ANV + G++NN LLDQ++ A + I+ +CA
Sbjct: 181 LELSAEEEPVARRLFLLTAKPVLYIANVDDEGYENNPLLDQVRNLAAQEKASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+++LGL E L+ +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELVELDEADRQEFMEDLGLSEPGLHRVIRAGYELLGLQTYFTAGVKEVRAWTIPKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D ++GFIRA I+Y F+ KGEQG K AGK+R EGK Y+V DGD+++F
Sbjct: 301 APQAAGVIHSDFEKGFIRAEVIAYDAFIACKGEQGAKEAGKLRLEGKDYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|344199406|ref|YP_004783732.1| GTP-binding protein YchF [Acidithiobacillus ferrivorans SS3]
gi|343774850|gb|AEM47406.1| GTP-binding protein YchF [Acidithiobacillus ferrivorans SS3]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNA+T+ I+AENYPFCTIEPN+G++ VPD RL+ L+ IVK
Sbjct: 1 MALACGIVGLPNVGKSTLFNAITRAGIAAENYPFCTIEPNVGLVAVPDPRLEALSAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ A ++ VDIAGLV+GA++GEGLGN+FLAHIRET+ + V RCF+D + H+SG ++
Sbjct: 61 QKVQHATMEFVDIAGLVAGAAQGEGLGNQFLAHIRETDAIALVTRCFEDPNVVHVSGHVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EV+ TELIL+DL+ +EK + ++ N+ ++ + + R++ +LN+
Sbjct: 121 PVADLEVVLTELILADLSTVEKAQARVARQAKGGNKDAVAEVAAMTRLLPHLNEGKAAAS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++LN+EE ++ L LLT+KP++ +ANV EN ++ L+ +A Q+ ++ +CA +
Sbjct: 181 LNLNSEEQEHLRSLCLLTMKPLMVIANVAENELQDGPWRAPLEAWAAEQHASVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L ++ FL +LGL+E LN +IRA++ LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELAELEPEEQNAFLQDLGLEEPGLNRIIRAAYHLLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA TI+Y DF+ Y+GE G K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHSDFERGFIRAQTIAYDDFIQYQGEHGAKEAGKMRAEGKEYVVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|329296257|ref|ZP_08253593.1| GTP-binding protein YchF [Plautia stali symbiont]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIQRCQKKAKSGDKDAKTELAALEKCLPYLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +E +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LALDADEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDKERDEFMAELGLEEPGLNRVIRAGYTLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K GK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEIGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|449328050|gb|AGE94351.1| putative ATP/GTP-binding protein [Citrobacter amalonaticus Y19]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + L+++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|227329558|ref|ZP_03833582.1| translation-associated GTPase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ ICA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAICAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLEEPGLNRVIRAGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429096691|ref|ZP_19158797.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
dublinensis 582]
gi|426283031|emb|CCJ84910.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
dublinensis 582]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKELIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMQELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|290475207|ref|YP_003468093.1| GTP-binding protein with nucleoside triP hydrolase domain
[Xenorhabdus bovienii SS-2004]
gi|289174526|emb|CBJ81320.1| putative GTP-binding protein with nucleoside triP hydrolase domain
[Xenorhabdus bovienii SS-2004]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PASDIEIINTELALADLDTCERAIHRVQKKAKGGDKDAKTELDALEKCLPHLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPHLDTVRAIAETEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDGDREEFMAELGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFINYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381404803|ref|ZP_09929487.1| GTP-binding protein YchF [Pantoea sp. Sc1]
gi|380738002|gb|EIB99065.1| GTP-binding protein YchF [Pantoea sp. Sc1]
Length = 363
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIQRVQKKAKGGDKDAKAELAALEKCLPHLSEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +E +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A ++ ++ +CA +
Sbjct: 181 LNLDADEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAASEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIACKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|167993231|ref|ZP_02574326.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|378445191|ref|YP_005232823.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378450357|ref|YP_005237716.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699660|ref|YP_005181617.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378989124|ref|YP_005252288.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379700957|ref|YP_005242685.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496475|ref|YP_005397164.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|422025960|ref|ZP_16372380.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030995|ref|ZP_16377179.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427550023|ref|ZP_18927688.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427565916|ref|ZP_18932411.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427585795|ref|ZP_18937193.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427609058|ref|ZP_18942057.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427633371|ref|ZP_18946953.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427656012|ref|ZP_18951718.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427661154|ref|ZP_18956627.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427668356|ref|ZP_18961429.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427765512|ref|ZP_18966588.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|205328657|gb|EDZ15421.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246970|emb|CBG24787.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267993735|gb|ACY88620.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158308|emb|CBW17807.1| hypothetical ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|323130056|gb|ADX17486.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332988671|gb|AEF07654.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|380463296|gb|AFD58699.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|414018973|gb|EKT02602.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414019456|gb|EKT03070.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414021469|gb|EKT05017.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414033121|gb|EKT16092.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414035045|gb|EKT17947.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414038034|gb|EKT20765.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414047872|gb|EKT30135.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414049350|gb|EKT31565.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414053780|gb|EKT35755.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414059876|gb|EKT41419.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414065413|gb|EKT46165.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 363
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PVEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|429094198|ref|ZP_19156748.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
dublinensis 1210]
gi|426740816|emb|CCJ82861.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
dublinensis 1210]
Length = 363
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDACERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKELIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIADKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMQELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387889173|ref|YP_006319471.1| GTP-binding protein [Escherichia blattae DSM 4481]
gi|414593621|ref|ZP_11443264.1| ribosome-associated ATPase YchF [Escherichia blattae NBRC 105725]
gi|386924006|gb|AFJ46960.1| GTP-binding protein [Escherichia blattae DSM 4481]
gi|403195521|dbj|GAB80916.1| ribosome-associated ATPase YchF [Escherichia blattae NBRC 105725]
Length = 363
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG +N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LG++E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS+ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|339999615|ref|YP_004730498.1| ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
gi|339512976|emb|CCC30720.1| putative ATP/GTP-binding protein [Salmonella bongori NCTC 12419]
Length = 363
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|372270584|ref|ZP_09506632.1| GTP-binding protein YchF [Marinobacterium stanieri S30]
Length = 363
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGIVPMPDPRLNALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ I+
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVANRIH 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I EL L+DL EK + + + ++ +I LL+++I +L + P+R
Sbjct: 121 PLEDIETINLELALADLESCEKQLQRVQRTAKGGDKEAIATKALLEKLIPHLEEGQPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EL + L+LLT KP +++ANV E+GF++N LDQ+K A ++N ++ IC KL
Sbjct: 181 LALDEAELKLVPTLHLLTTKPTMYIANVSEDGFEDNPYLDQVKELAASENAEVVAICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FL ++G++E L+ +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEISELEDDEKIEFLQDMGMEEPGLDRVIRAGYSLLGLQTYFTAGVKEVRAWTVRIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ +KGEQG K+AG+ R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIEHKGEQGAKDAGRWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|54298643|ref|YP_125012.1| GTP-dependent nucleic acid-binding protein EngD [Legionella
pneumophila str. Paris]
gi|53752428|emb|CAH13860.1| hypothetical protein lpp2707 [Legionella pneumophila str. Paris]
Length = 363
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL +L+NIVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSNIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV GAS GEGLGN+FLA+IRET+ + HV+RCF + + H+ G ++
Sbjct: 61 QQVVHATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ +I LK L++I +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKSLLKVGKNSKSGNKEAIFELKTLEKIKAHLDAGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE K L LLT KP++++ANV +NG++NN LLD+++ A +N I+ +CA
Sbjct: 181 LELTPEEEQVSKRLFLLTAKPVLYIANVDDNGYENNPLLDKVQALASQENASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+ +LGL E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEEDRQEFMVDLGLSEPGLNKVIRAGYELLGLQTYFTAGVKEVRAWTIRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ + GEQG K AGK+R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIRFGGEQGAKEAGKLRLEGKEYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|148358611|ref|YP_001249818.1| GTP-dependent nucleic acid-binding protein [Legionella pneumophila
str. Corby]
gi|296108299|ref|YP_003620000.1| GTP binding protein [Legionella pneumophila 2300/99 Alcoy]
gi|148280384|gb|ABQ54472.1| GTP-dependent nucleic acid-binding protein [Legionella pneumophila
str. Corby]
gi|295650201|gb|ADG26048.1| GTP binding protein [Legionella pneumophila 2300/99 Alcoy]
Length = 363
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL +L++IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV GAS GEGLGN+FLA+IRET+ + HV+RCF + + H+ G ++
Sbjct: 61 QQVIHATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ +I LK L++I +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKSLLKVGKNSKSGNKEAIFELKTLEKIKAHLDTGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE K L LLT KP++++ANV +NG++NN LLD++K A +N I+ +CA
Sbjct: 181 LELTPEEEQVSKRLFLLTAKPVLYIANVDDNGYENNPLLDKVKALASQENASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+ +LGL E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEEDRQEFMVDLGLSEPGLNKVIRAGYELLGLQTYFTAGVKEVRAWTIRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY+DF+ + GEQG K AGK+R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYEDFIRFGGEQGAKEAGKLRLEGKEYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|237809049|ref|YP_002893489.1| GTP-dependent nucleic acid-binding protein EngD [Tolumonas auensis
DSM 9187]
gi|237501310|gb|ACQ93903.1| GTP-binding protein YchF [Tolumonas auensis DSM 9187]
Length = 363
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIIKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRIVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + KK ++ + L++L++ + L ++ +R
Sbjct: 121 PADDIDTINTELALSDLETCERAIQRIQKKAKGGDKDAKAELEVLEKCLPQLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAVIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +++++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADLAEMEEEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|156933666|ref|YP_001437582.1| GTP-dependent nucleic acid-binding protein EngD [Cronobacter
sakazakii ATCC BAA-894]
gi|389840720|ref|YP_006342804.1| GTP-dependent nucleic acid-binding protein EngD [Cronobacter
sakazakii ES15]
gi|417792139|ref|ZP_12439538.1| GTP-binding protein YchF [Cronobacter sakazakii E899]
gi|424799909|ref|ZP_18225451.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 696]
gi|429104960|ref|ZP_19166829.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
malonaticus 681]
gi|429110613|ref|ZP_19172383.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
malonaticus 507]
gi|429115873|ref|ZP_19176791.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 701]
gi|429120898|ref|ZP_19181554.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 680]
gi|449307979|ref|YP_007440335.1| GTP-binding protein YchF [Cronobacter sakazakii SP291]
gi|156531920|gb|ABU76746.1| hypothetical protein ESA_01488 [Cronobacter sakazakii ATCC BAA-894]
gi|333953780|gb|EGL71683.1| GTP-binding protein YchF [Cronobacter sakazakii E899]
gi|387851196|gb|AFJ99293.1| GTP-dependent nucleic acid-binding protein EngD [Cronobacter
sakazakii ES15]
gi|423235630|emb|CCK07321.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 696]
gi|426291683|emb|CCJ92942.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
malonaticus 681]
gi|426311770|emb|CCJ98496.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
malonaticus 507]
gi|426319002|emb|CCK02904.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 701]
gi|426324628|emb|CCK12291.1| GTP-binding and nucleic acid-binding protein YchF [Cronobacter
sakazakii 680]
gi|449098012|gb|AGE86046.1| GTP-binding protein YchF [Cronobacter sakazakii SP291]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL + IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDTINTELALSDLDTCERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE IK+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKEEKDLIKYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407715598|ref|YP_006836878.1| GTPase [Cycloclasticus sp. P1]
gi|407255934|gb|AFT66375.1| GTPase, probable translation factor [Cycloclasticus sp. P1]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALTK I+AENYPFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MALNCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIEPNTGIVPVPDLRLDKLAQIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P + VDIAGLV+GASKGEGLGN+FLA+IRE++ + HV+RCF+DD + H++G+I+
Sbjct: 61 ERVIPTTFEFVDIAGLVAGASKGEGLGNQFLANIRESDAIAHVVRCFEDDDVIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVIQTEL L+D+A L+K + K K N+ ++ L+++ + +L+ I +R
Sbjct: 121 PLSDIEVIQTELALADMASLDKALTKATKASKSGNKDELKRKALIEQALAHLDSDITLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL S L LLT+KP++++ANV+E+GF NN LD + A Q I+ +CA +
Sbjct: 181 LGLSEDELKSFSDLQLLTLKPMLYIANVQEDGFVNNPHLDAVTALAQKQGAEIVAVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI L+ ++ FL+ +GL+E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAEIIQLDEDERAEFLEEMGLEEPGLNRVIRAGYHLLGLQTYFTAGVKEVRAWTIKQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y+DF+ + GEQG K AGK+ +GK Y+++DGD+ +F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEITAYEDFVQHNGEQGAKEAGKLGVQGKDYIMQDGDVTHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|344340956|ref|ZP_08771879.1| GTP-binding protein YchF [Thiocapsa marina 5811]
gi|343799201|gb|EGV17152.1| GTP-binding protein YchF [Thiocapsa marina 5811]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDVLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D + H++G ++
Sbjct: 61 QRVIPTTMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFENDDVVHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL + K +D+ + ++ + +L++I L+ P+R
Sbjct: 121 PLDDIEVINTELALADLESVTKALDRAERMVKTGDKKILARKAVLEQIRDQLDAGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ E L ++ L LLT KP +++ANV E+GF +N +LD++ A + ++ +CA +
Sbjct: 181 MGLDAEALREVRDLFLLTAKPTLYIANVAEDGFVDNPILDKVVALAGEEGAEVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI DL + ++ FL LGL E LN ++RA + LL L TYFT G+KE+RAWTIP G
Sbjct: 241 EAEIFDLEDQERDEFLAELGLTEPGLNRVVRAGYRLLGLETYFTAGEKEVRAWTIPAGVR 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD +RGFIRA I+Y DF+ KGEQG K AGK+RSEGK+Y+V+DGD+++F
Sbjct: 301 APQAAAVIHTDFERGFIRAEVIAYDDFVACKGEQGAKEAGKLRSEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350422150|ref|XP_003493072.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
[Bombus impatiens]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL++IRET + HV+RCF++D I H++G+IN
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLSNIRETEAIGHVVRCFENDNIIHVAGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL E+ I + KK ++ + L +L++ + +L + +R
Sbjct: 121 PAEDIDIINTELALADLDTCERAIHRVQKKAKGGDKDAKFELSVLEKCLPHLENAHMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK+L+ LT+KP +++ANV E+GF+NN LDQ+K A + ++ +CA +
Sbjct: 181 LDLDKEELAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDQVKAIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LG+ E LN +IRA + LL+L+TYFT G KE+RAWTI G T
Sbjct: 241 EADIAELDDADRDEFMAELGIDEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTISVGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ Y GEQG K AGK+RSEGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIQYGGEQGAKEAGKMRSEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|16760677|ref|NP_456294.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16765125|ref|NP_460740.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|29141564|ref|NP_804906.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|62180348|ref|YP_216765.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161613717|ref|YP_001587682.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167553610|ref|ZP_02347359.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168233819|ref|ZP_02658877.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168241370|ref|ZP_02666302.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259987|ref|ZP_02681960.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168820526|ref|ZP_02832526.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194446679|ref|YP_002041036.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194448843|ref|YP_002045829.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471403|ref|ZP_03077387.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737864|ref|YP_002114816.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251280|ref|YP_002146243.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263660|ref|ZP_03163734.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198243402|ref|YP_002215359.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200391121|ref|ZP_03217732.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927806|ref|ZP_03219007.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205352548|ref|YP_002226349.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856709|ref|YP_002243360.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213426487|ref|ZP_03359237.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213650576|ref|ZP_03380629.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213850368|ref|ZP_03381266.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224583727|ref|YP_002637525.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|238913685|ref|ZP_04657522.1| translation-associated GTPase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289829004|ref|ZP_06546704.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374980795|ref|ZP_09722125.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375001075|ref|ZP_09725415.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375114677|ref|ZP_09759847.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|375118838|ref|ZP_09764005.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|375123357|ref|ZP_09768521.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|378955291|ref|YP_005212778.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|378959255|ref|YP_005216741.1| GTP-dependent nucleic acid-binding protein engD [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|378984346|ref|YP_005247501.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|386591617|ref|YP_006088017.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|409249886|ref|YP_006885701.1| GTP-dependent nucleic acid-binding protein engD [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|416421542|ref|ZP_11689540.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416430216|ref|ZP_11694930.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416436437|ref|ZP_11698239.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416448897|ref|ZP_11706548.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416451065|ref|ZP_11707958.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416456387|ref|ZP_11711391.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416468841|ref|ZP_11718190.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416481606|ref|ZP_11723340.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416491709|ref|ZP_11727220.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416498049|ref|ZP_11729975.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416504690|ref|ZP_11733272.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416511998|ref|ZP_11737582.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416527795|ref|ZP_11743508.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416535265|ref|ZP_11747629.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416541744|ref|ZP_11751176.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416550663|ref|ZP_11756083.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416562593|ref|ZP_11762293.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416570842|ref|ZP_11766337.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416579186|ref|ZP_11771044.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416585056|ref|ZP_11774609.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416590056|ref|ZP_11777572.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416597141|ref|ZP_11781883.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416604474|ref|ZP_11786234.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416612148|ref|ZP_11791327.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416619385|ref|ZP_11795047.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416627744|ref|ZP_11799190.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416638023|ref|ZP_11803710.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416651600|ref|ZP_11811117.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416654786|ref|ZP_11812290.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416666310|ref|ZP_11817384.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416684445|ref|ZP_11824734.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416688412|ref|ZP_11825203.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416704897|ref|ZP_11830509.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416710883|ref|ZP_11834841.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416716750|ref|ZP_11839042.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416721886|ref|ZP_11842945.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416728091|ref|ZP_11847456.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416738535|ref|ZP_11853330.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416744478|ref|ZP_11856633.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416753523|ref|ZP_11860851.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416762185|ref|ZP_11866181.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416771553|ref|ZP_11872788.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417333368|ref|ZP_12116941.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|417341409|ref|ZP_12122480.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
gi|417357676|ref|ZP_12132761.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|417365388|ref|ZP_12138032.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|417372970|ref|ZP_12143122.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|417383029|ref|ZP_12148843.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|417390562|ref|ZP_12154021.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Minnesota str. A4-603]
gi|417458838|ref|ZP_12164065.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Montevideo str. S5-403]
gi|417474755|ref|ZP_12169758.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|417517989|ref|ZP_12180450.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|417530299|ref|ZP_12185606.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|418484196|ref|ZP_13053200.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418486560|ref|ZP_13055518.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493623|ref|ZP_13060085.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418497715|ref|ZP_13064132.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418502447|ref|ZP_13068819.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509394|ref|ZP_13075688.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418514976|ref|ZP_13081166.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418527611|ref|ZP_13093567.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418789087|ref|ZP_13344875.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418792518|ref|ZP_13348263.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418797079|ref|ZP_13352770.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418809318|ref|ZP_13364870.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418813473|ref|ZP_13368994.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418817786|ref|ZP_13373270.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820696|ref|ZP_13376128.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833587|ref|ZP_13388510.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418836803|ref|ZP_13391687.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418840421|ref|ZP_13395250.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418845129|ref|ZP_13399915.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418850458|ref|ZP_13405174.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418854154|ref|ZP_13408833.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860021|ref|ZP_13414608.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418863350|ref|ZP_13417888.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866966|ref|ZP_13421427.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419730558|ref|ZP_14257504.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419732244|ref|ZP_14259150.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739846|ref|ZP_14266587.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419743775|ref|ZP_14270438.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419748443|ref|ZP_14274939.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421358770|ref|ZP_15809067.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421362740|ref|ZP_15812992.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367940|ref|ZP_15818133.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370393|ref|ZP_15820558.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377882|ref|ZP_15827971.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382490|ref|ZP_15832536.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421387783|ref|ZP_15837782.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421391886|ref|ZP_15841852.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421394911|ref|ZP_15844850.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421401174|ref|ZP_15851050.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421403224|ref|ZP_15853078.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421410590|ref|ZP_15860371.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421412856|ref|ZP_15862610.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421416849|ref|ZP_15866568.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421844|ref|ZP_15871512.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425882|ref|ZP_15875516.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421431336|ref|ZP_15880921.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421433457|ref|ZP_15883017.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421441203|ref|ZP_15890673.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446859|ref|ZP_15896271.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447969|ref|ZP_15897365.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421885818|ref|ZP_16317002.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|436603513|ref|ZP_20513182.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436715780|ref|ZP_20518808.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436797862|ref|ZP_20523308.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811275|ref|ZP_20530155.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436815649|ref|ZP_20533200.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436846977|ref|ZP_20539609.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851239|ref|ZP_20541838.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858004|ref|ZP_20546524.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865179|ref|ZP_20551146.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875648|ref|ZP_20557555.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436883229|ref|ZP_20561658.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887910|ref|ZP_20564239.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896300|ref|ZP_20569056.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906279|ref|ZP_20575125.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911773|ref|ZP_20577602.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436920062|ref|ZP_20582801.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930369|ref|ZP_20588594.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436935725|ref|ZP_20591165.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942914|ref|ZP_20595860.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436951592|ref|ZP_20600647.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436964699|ref|ZP_20606335.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436971326|ref|ZP_20609719.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436985395|ref|ZP_20614915.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991637|ref|ZP_20617648.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437012148|ref|ZP_20624661.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437020881|ref|ZP_20627692.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437029828|ref|ZP_20631010.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437042534|ref|ZP_20636125.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437052302|ref|ZP_20641725.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437058245|ref|ZP_20645092.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437069224|ref|ZP_20651179.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437075935|ref|ZP_20654298.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086502|ref|ZP_20660511.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437095523|ref|ZP_20664627.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437117600|ref|ZP_20670043.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437134657|ref|ZP_20679081.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139900|ref|ZP_20682164.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437146960|ref|ZP_20686512.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437155250|ref|ZP_20691469.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437162180|ref|ZP_20695839.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167242|ref|ZP_20698560.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177195|ref|ZP_20703675.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437183814|ref|ZP_20707910.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437200720|ref|ZP_20711738.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437261301|ref|ZP_20718371.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265899|ref|ZP_20720714.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437282129|ref|ZP_20729130.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437292418|ref|ZP_20731945.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437308283|ref|ZP_20735324.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437321204|ref|ZP_20738553.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437342599|ref|ZP_20745418.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437363526|ref|ZP_20748503.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437424563|ref|ZP_20755227.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437456029|ref|ZP_20760208.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437462448|ref|ZP_20762599.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437478378|ref|ZP_20767391.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437489572|ref|ZP_20770358.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437503802|ref|ZP_20774877.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437544994|ref|ZP_20782961.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557128|ref|ZP_20785089.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437581063|ref|ZP_20792209.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437596078|ref|ZP_20796130.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437601335|ref|ZP_20797579.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437614160|ref|ZP_20801787.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437678112|ref|ZP_20817526.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437695511|ref|ZP_20822152.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437702194|ref|ZP_20824096.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437731476|ref|ZP_20831328.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437807531|ref|ZP_20839793.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437825560|ref|ZP_20843818.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437885053|ref|ZP_20849028.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438095547|ref|ZP_20862066.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438096915|ref|ZP_20862175.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112309|ref|ZP_20868906.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438128685|ref|ZP_20873145.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|440762975|ref|ZP_20942024.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440764719|ref|ZP_20943743.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768138|ref|ZP_20947111.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440774587|ref|ZP_20953474.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445129075|ref|ZP_21380623.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445141402|ref|ZP_21385424.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445151903|ref|ZP_21390606.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445175351|ref|ZP_21397347.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445182390|ref|ZP_21398528.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445234018|ref|ZP_21406560.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445338873|ref|ZP_21416252.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346533|ref|ZP_21418826.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445362725|ref|ZP_21424369.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120025|ref|YP_007470273.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|25330229|pir||AB0721 probable ATP/GTP-binding protein STY1910 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16420314|gb|AAL20699.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502973|emb|CAD02139.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137191|gb|AAO68755.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|62127981|gb|AAX65684.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161363081|gb|ABX66849.1| hypothetical protein SPAB_01442 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405342|gb|ACF65564.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194407147|gb|ACF67366.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457767|gb|EDX46606.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713366|gb|ACF92587.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197214983|gb|ACH52380.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241915|gb|EDY24535.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937918|gb|ACH75251.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199603566|gb|EDZ02112.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323148|gb|EDZ08344.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205272329|emb|CAR37209.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205321986|gb|EDZ09825.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205332111|gb|EDZ18875.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339463|gb|EDZ26227.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342710|gb|EDZ29474.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350649|gb|EDZ37280.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708512|emb|CAR32833.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224468254|gb|ACN46084.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|312912774|dbj|BAJ36748.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320085714|emb|CBY95492.1| GTP-dependent nucleic acid-binding protein engD [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321224415|gb|EFX49478.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322616780|gb|EFY13688.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322620409|gb|EFY17275.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322625689|gb|EFY22508.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322626139|gb|EFY22949.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633745|gb|EFY30485.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322638899|gb|EFY35592.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322640882|gb|EFY37531.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644104|gb|EFY40649.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322649175|gb|EFY45613.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655334|gb|EFY51642.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660908|gb|EFY57139.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322662794|gb|EFY59001.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322667978|gb|EFY64137.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322674260|gb|EFY70354.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678541|gb|EFY74599.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322683200|gb|EFY79216.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322686893|gb|EFY82871.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322714823|gb|EFZ06394.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|323195216|gb|EFZ80396.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323200192|gb|EFZ85278.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323204520|gb|EFZ89524.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323213716|gb|EFZ98498.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217348|gb|EGA02067.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323219235|gb|EGA03730.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323228012|gb|EGA12157.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323231369|gb|EGA15482.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323235809|gb|EGA19888.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240378|gb|EGA24421.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323245271|gb|EGA29271.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323249842|gb|EGA33741.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252832|gb|EGA36668.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258535|gb|EGA42204.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263295|gb|EGA46831.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323266744|gb|EGA50230.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268950|gb|EGA52406.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326623105|gb|EGE29450.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|326627607|gb|EGE33950.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|353075763|gb|EHB41523.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353578679|gb|EHC40444.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353593413|gb|EHC51170.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|353594593|gb|EHC52063.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|353603815|gb|EHC58792.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|353613206|gb|EHC65366.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|353618432|gb|EHC69111.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Minnesota str. A4-603]
gi|353633093|gb|EHC79993.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Montevideo str. S5-403]
gi|353646408|gb|EHC89832.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|353650291|gb|EHC92688.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353666430|gb|EHD04243.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|357205902|gb|AET53948.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357957933|gb|EHJ82759.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
gi|363555236|gb|EHL39466.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363557138|gb|EHL41345.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363566407|gb|EHL50424.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363568096|gb|EHL52086.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363570402|gb|EHL54338.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363572924|gb|EHL56812.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|363575295|gb|EHL59153.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|366059981|gb|EHN24248.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366063768|gb|EHN27979.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366074266|gb|EHN38329.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366075472|gb|EHN39529.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366075803|gb|EHN39855.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077419|gb|EHN41434.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366078101|gb|EHN42106.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366827347|gb|EHN54253.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372204239|gb|EHP17767.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374353127|gb|AEZ44888.1| GTP-dependent nucleic acid-binding protein engD [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|379984624|emb|CCF89275.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|381294566|gb|EIC35705.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381297411|gb|EIC38502.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381303093|gb|EIC44122.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381311340|gb|EIC52159.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381314096|gb|EIC54871.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383798661|gb|AFH45743.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|392761047|gb|EJA17877.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392768312|gb|EJA25069.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392770452|gb|EJA27180.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392773403|gb|EJA30099.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392774699|gb|EJA31394.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392787325|gb|EJA43867.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392792256|gb|EJA48720.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795421|gb|EJA51793.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392801164|gb|EJA57394.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392810911|gb|EJA66923.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392813938|gb|EJA69902.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392818308|gb|EJA74192.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392824947|gb|EJA80705.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392828387|gb|EJA84082.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392833218|gb|EJA88833.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840078|gb|EJA95616.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395986460|gb|EJH95624.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395987210|gb|EJH96373.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395990564|gb|EJH99695.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395997187|gb|EJI06228.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395997598|gb|EJI06638.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006476|gb|EJI15439.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396008608|gb|EJI17542.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396010849|gb|EJI19761.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396013648|gb|EJI22535.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396021239|gb|EJI30065.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396022723|gb|EJI31536.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396030255|gb|EJI38990.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396039944|gb|EJI48568.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396041159|gb|EJI49782.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396045026|gb|EJI53621.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396053283|gb|EJI61780.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396055735|gb|EJI64212.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396061861|gb|EJI70277.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062441|gb|EJI70854.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396064806|gb|EJI73189.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396074266|gb|EJI82557.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|434942053|gb|ELL48411.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434960788|gb|ELL54138.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434963906|gb|ELL56928.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434972770|gb|ELL65179.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434973765|gb|ELL66153.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434977141|gb|ELL69290.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986541|gb|ELL78192.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434987624|gb|ELL79258.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434990156|gb|ELL81706.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434995239|gb|ELL86556.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996214|gb|ELL87530.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435001674|gb|ELL92763.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435009620|gb|ELM00406.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435014856|gb|ELM05413.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016189|gb|ELM06715.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435026018|gb|ELM16149.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435028127|gb|ELM18207.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032024|gb|ELM21968.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435038563|gb|ELM28344.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435043113|gb|ELM32830.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435048556|gb|ELM38121.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435052059|gb|ELM41561.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435057615|gb|ELM46984.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062235|gb|ELM51417.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435063468|gb|ELM52616.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435068214|gb|ELM57243.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435079509|gb|ELM68220.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435082862|gb|ELM71473.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435084459|gb|ELM73045.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435090902|gb|ELM79303.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435092642|gb|ELM80997.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435094058|gb|ELM82397.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435102648|gb|ELM90751.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435105232|gb|ELM93269.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435109900|gb|ELM97846.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435113038|gb|ELN00896.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435120136|gb|ELN07738.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435131305|gb|ELN18532.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435134590|gb|ELN21716.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435138118|gb|ELN25145.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435143135|gb|ELN30003.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435151864|gb|ELN38503.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435154875|gb|ELN41433.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435162176|gb|ELN48367.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163757|gb|ELN49893.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435168747|gb|ELN54579.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177263|gb|ELN62595.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435181029|gb|ELN66122.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435185878|gb|ELN70734.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435192791|gb|ELN77306.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435196802|gb|ELN81126.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435200128|gb|ELN84141.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435207207|gb|ELN90695.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435209483|gb|ELN92802.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435215098|gb|ELN97834.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435219114|gb|ELO01477.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435221197|gb|ELO03470.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435231798|gb|ELO12960.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435234004|gb|ELO14894.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435236800|gb|ELO17519.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435240377|gb|ELO20781.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435241234|gb|ELO21600.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435250560|gb|ELO30284.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435261105|gb|ELO40266.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435263816|gb|ELO42849.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435274309|gb|ELO52431.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435277787|gb|ELO55719.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435289194|gb|ELO66182.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435294800|gb|ELO71369.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435300851|gb|ELO76910.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435305517|gb|ELO80991.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435313985|gb|ELO87485.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435327260|gb|ELO99002.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435330387|gb|ELP01653.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435331076|gb|ELP02303.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|436412810|gb|ELP10748.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436415402|gb|ELP13321.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436418018|gb|ELP15904.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436421725|gb|ELP19569.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|444851104|gb|ELX76199.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854385|gb|ELX79449.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444855046|gb|ELX80099.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444858559|gb|ELX83544.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444860888|gb|ELX85788.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444871329|gb|ELX95767.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444872622|gb|ELX96948.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444877907|gb|ELY02040.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444883952|gb|ELY07804.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451909029|gb|AGF80835.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261343916|ref|ZP_05971561.1| GTP-binding protein YchF [Providencia rustigianii DSM 4541]
gi|282568302|gb|EFB73837.1| GTP-binding protein YchF [Providencia rustigianii DSM 4541]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+DD I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEDDNIIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L+ L++ + +L ++ +R
Sbjct: 121 PASDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLEQAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVSEDGFENNPYLDKVHEIAKAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ Y+GEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIKYRGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|440287288|ref|YP_007340053.1| GTP-binding protein YchF [Enterobacteriaceae bacterium strain FGI
57]
gi|440046810|gb|AGB77868.1| GTP-binding protein YchF [Enterobacteriaceae bacterium strain FGI
57]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMQELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|397665244|ref|YP_006506782.1| putative GTP-binding protein [Legionella pneumophila subsp.
pneumophila]
gi|395128655|emb|CCD06873.1| putative GTP-binding protein [Legionella pneumophila subsp.
pneumophila]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL +L+NIVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSNIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV GAS GEGLGN+FLA+IRET+ + HV+RCF + + H+ G ++
Sbjct: 61 QQVLHATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ +I LK L++I +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKSLLKVGKNSKSGNKEAIFELKTLEKIKAHLDAGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE K L LLT KP++++ANV +NG++NN LLD+++ A +N I+ +CA
Sbjct: 181 LELTPEEEQISKRLFLLTAKPVLYIANVDDNGYENNPLLDKVQALASQENASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+ +LGL E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEEDRQEFMVDLGLSEPGLNKVIRAGYELLGLQTYFTAGVKEVRAWTIRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ + GEQG K AGK+R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIRFGGEQGAKEAGKLRLEGKEYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421569117|ref|ZP_16014822.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421574829|ref|ZP_16020450.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421577764|ref|ZP_16023349.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421583067|ref|ZP_16028596.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|402525029|gb|EJW32326.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402526471|gb|EJW33746.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527801|gb|EJW35060.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402532533|gb|EJW39725.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +V+ TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVVNTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|423140263|ref|ZP_17127901.1| GTP-binding protein YchF [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052817|gb|EHY70708.1| GTP-binding protein YchF [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374849858|dbj|BAL52862.1| translation-associated GTPase [uncultured gamma proteobacterium]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALT+ +I AENYPFCTI+PN+GI+ VPD RL+ L IV+
Sbjct: 1 MALHCGIVGLPNVGKSTLFNALTRAQIPAENYPFCTIDPNVGIVPVPDLRLERLAEIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I PA ++ VDIAGLV+GASKGEGLGN+FL HIRET+ ++HV+RCF D ITH++G ++
Sbjct: 61 QRIVPATVEFVDIAGLVAGASKGEGLGNRFLGHIRETDAIVHVVRCFDDPDITHVAGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E IQTELIL+DL E+ +++ + + ++ LL+++I +L+ P+R
Sbjct: 121 PIRDIETIQTELILADLESAERALNRVMRAAKSGEKEALLEKALLEKVIAHLDSGRPVRC 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +E +K L LLT KP ++VANV+E G ++N LD++ YA + + ICA L
Sbjct: 181 LALDPKEQARLKALQLLTAKPTLYVANVQEGGLESNPWLDRVLEYAAAEGAEAVPICAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L++ D+ FL+ LG+ E+ L + RA++ LL L T+FT G KE+RAWT+P GT
Sbjct: 241 EAEIAQLDDEDRSVFLEELGMAESGLERMARAAYRLLGLETFFTAGSKEVRAWTVPIGTL 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A AAG+IH+D ++GFIRA I+Y DF+ Y GEQG K AGK R EGK Y+++DGD+++F
Sbjct: 301 APAAAGVIHSDFEKGFIRAEVIAYADFIRYGGEQGAKEAGKWRLEGKDYVIQDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|300115101|ref|YP_003761676.1| GTP-binding protein YchF [Nitrosococcus watsonii C-113]
gi|299541038|gb|ADJ29355.1| GTP-binding protein YchF [Nitrosococcus watsonii C-113]
Length = 362
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 266/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTI+PN+G++ +PD RL + IV+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIDPNVGMVPMPDPRLDKIAAIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P + VDIAGLV+GAS+GEGLGN+FLAHIRET + HV+RCF+D + H++G+I+
Sbjct: 61 QQVLPTTMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQNVIHVAGQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + + E ++ L LL+++ +LN+ +R
Sbjct: 121 PLGDIEVIDTELALADLETVEKALSRATRAAKADKE-ALVLKSLLEKVRGHLNEGKSVRT 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE ++ L+LLT KP++++ANV E+GF+NN L L+ +A + ++ +CA +
Sbjct: 180 LVLDSEEWKELQSLHLLTSKPVLYIANVAEDGFENNPWLKALQEFATREGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S L + +K+ FL LG++E LN +IRA + LL L+T+FT G KE+RAWT+P G T
Sbjct: 240 EAELSQLEDAEKEEFLAELGIEEPGLNRVIRAGYKLLGLQTFFTAGPKEVRAWTVPMGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISYKDF+ +GEQG K AGK R EGK Y+V+DGD+++F
Sbjct: 300 APQAAGVIHTDFEKGFIRAEVISYKDFIACQGEQGAKEAGKWRLEGKDYVVQDGDVIHFR 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|161503103|ref|YP_001570215.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|160864450|gb|ABX21073.1| hypothetical protein SARI_01168 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|430761935|ref|YP_007217792.1| GTP-binding and nucleic acid-binding protein YchF [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011559|gb|AGA34311.1| GTP-binding and nucleic acid-binding protein YchF [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 363
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ +I+AENYPFCTI+PN+G++EVPD RL L IV+
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTRAEIAAENYPFCTIDPNVGVVEVPDPRLAVLAEIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GA++GEGLGN+FLAH+RET+ + V+RCF+D+ + H++G I+
Sbjct: 61 QRVLPTTVEFVDIAGLVAGAAQGEGLGNQFLAHVRETDAIAQVVRCFEDEDVVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL L K I + + +++ +I L++ +R+ L+K P+R
Sbjct: 121 PLADIETIATELALADLDTLSKAITRLTRAAKSQDKEAIARLEVAERVAAGLDKGTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+ E L ++ L+LLT KP+I++ANV E+GF++N LL Q++ +A + ++ +CA +
Sbjct: 181 QALSPETLSLLRDLHLLTAKPLIYIANVAEDGFRDNPLLAQVEAHASTERAEVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L ++ FL LGL E L+ +IRA++ LLDL+T+FT G KE+RAWT+ G+T
Sbjct: 241 EAEIAQLEAGERSEFLAELGLAEPGLDRVIRATYRLLDLQTFFTCGPKEVRAWTVRRGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y+DF+ + GE G K+AGK R EGK+Y++++GD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVIAYEDFVAHGGELGAKDAGKWRLEGKEYVMKEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|296101950|ref|YP_003612096.1| translation-associated GTPase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392979485|ref|YP_006478073.1| GTP-binding protein YchF [Enterobacter cloacae subsp. dissolvens
SDM]
gi|295056409|gb|ADF61147.1| translation-associated GTPase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392325418|gb|AFM60371.1| GTP-binding protein YchF [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 363
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + +KK ++ + L +L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRISKKAKGGDKDAKAELAVLEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSKDEKELIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAEKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMAELGLEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|153001808|ref|YP_001367489.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica
OS185]
gi|160876541|ref|YP_001555857.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica
OS195]
gi|217972297|ref|YP_002357048.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica
OS223]
gi|373950589|ref|ZP_09610550.1| GTP-binding protein YchF [Shewanella baltica OS183]
gi|386323574|ref|YP_006019691.1| GTP-binding protein YchF [Shewanella baltica BA175]
gi|151366426|gb|ABS09426.1| GTP-binding protein YchF [Shewanella baltica OS185]
gi|160862063|gb|ABX50597.1| GTP-binding protein YchF [Shewanella baltica OS195]
gi|217497432|gb|ACK45625.1| GTP-binding protein YchF [Shewanella baltica OS223]
gi|333817719|gb|AEG10385.1| GTP-binding protein YchF [Shewanella baltica BA175]
gi|373887189|gb|EHQ16081.1| GTP-binding protein YchF [Shewanella baltica OS183]
Length = 363
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++ +++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + +++L+++ L+++ +R
Sbjct: 121 PAGDIEVINTELALADLDSLERAVQRQQKRAKGGDKDAKFEVEVLEKMRPILDEAKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MELSKEELEAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAATENAIVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ D+ F+ +LG++E L+ +IRA + LL+L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMEISDRDEFMADLGIEEPGLDRVIRAGYQLLNLQTYFTAGVKEVRAWTVPVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY+DF+ +KGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMSYEDFIAHKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|198283912|ref|YP_002220233.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218668057|ref|YP_002426546.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415992162|ref|ZP_11560110.1| GTP-binding protein YchF [Acidithiobacillus sp. GGI-221]
gi|198248433|gb|ACH84026.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520270|gb|ACK80856.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC
23270]
gi|339835324|gb|EGQ63011.1| GTP-binding protein YchF [Acidithiobacillus sp. GGI-221]
Length = 363
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNA+TK I+AENYPFCTIEPN+G++ VPD RL+ L+ IVK
Sbjct: 1 MALACGIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGLVAVPDPRLEALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ A ++ VDIAGLV+GA++GEGLGN+FLAHIRET+ + V RCF+D + H+SG ++
Sbjct: 61 QKVQHATMEFVDIAGLVAGAAQGEGLGNQFLAHIRETDAIALVTRCFEDPNVVHVSGHVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EV+ TELIL+DL +EK + ++ N+ ++ + R++ +LN+ P
Sbjct: 121 PVADLEVVLTELILADLGTVEKAQARVARQAKGGNKDAVAEAAAMARLLPHLNEGKPAAS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++LN+EE ++ L LLT+KP++ +ANV E+ + L+ +A ++ ++ +CA +
Sbjct: 181 LNLNSEEQEHLRSLCLLTMKPLMVIANVAEDELQGGPWRAPLEAWATERHASVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L ++ FL +LGL+E LN +IRA++ LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELAELEPEEQNAFLQDLGLEEPGLNRIIRAAYRLLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA TI+Y DF+ YKGEQG K AGK+R+EGK+Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHSDFERGFIRAQTIAYDDFIRYKGEQGAKEAGKMRAEGKEYVVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417348715|ref|ZP_12127592.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Gaminara str. A4-567]
gi|353574861|gb|EHC37765.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Gaminara str. A4-567]
Length = 363
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSLVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|56413295|ref|YP_150370.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197362220|ref|YP_002141857.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56127552|gb|AAV77058.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093697|emb|CAR59169.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 363
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADITELEDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|52842860|ref|YP_096659.1| GTP-dependent nucleic acid-binding protein EngD [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|54295492|ref|YP_127907.1| GTP-dependent nucleic acid-binding protein EngD [Legionella
pneumophila str. Lens]
gi|378778549|ref|YP_005186988.1| GTP binding protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52629971|gb|AAU28712.1| GTP binding protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53755324|emb|CAH16820.1| hypothetical protein lpl2579 [Legionella pneumophila str. Lens]
gi|307611529|emb|CBX01206.1| hypothetical protein LPW_29051 [Legionella pneumophila 130b]
gi|364509365|gb|AEW52889.1| GTP binding protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 363
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL +L++IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV GAS GEGLGN+FLA+IRET+ + HV+RCF + + H+ G ++
Sbjct: 61 QQVLHATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ +I LK L++I +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKSLLKVGKNSKSGNKEAIFELKTLEKIKAHLDAGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE K L LLT KP++++ANV +NG++NN LLD+++ A +N I+ +CA
Sbjct: 181 LELTPEEEQVSKRLFLLTAKPVLYIANVDDNGYENNPLLDKVQALASQENASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+ +LGL E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEEDRQEFMVDLGLSEPGLNKVIRAGYELLGLQTYFTAGVKEVRAWTIRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ + GEQG K AGK+R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIRFGGEQGAKEAGKLRLEGKEYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|168462736|ref|ZP_02696667.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|417325978|ref|ZP_12111800.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|418760429|ref|ZP_13316584.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418765859|ref|ZP_13321940.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418770167|ref|ZP_13326191.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418777389|ref|ZP_13333318.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418779019|ref|ZP_13334926.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418785858|ref|ZP_13341684.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418801398|ref|ZP_13357034.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|419788260|ref|ZP_14313951.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793647|ref|ZP_14319265.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|195634405|gb|EDX52757.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|353574547|gb|EHC37550.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|392616573|gb|EIW99005.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392617774|gb|EIX00189.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392737963|gb|EIZ95114.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392739612|gb|EIZ96745.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392742734|gb|EIZ99818.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392743848|gb|EJA00910.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392750730|gb|EJA07690.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392754469|gb|EJA11386.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392780362|gb|EJA37017.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
Length = 363
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELEDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|438063661|ref|ZP_20856812.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435313084|gb|ELO86844.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
Length = 363
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLVEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|378709746|ref|YP_005274640.1| GTP-binding protein YchF [Shewanella baltica OS678]
gi|418025563|ref|ZP_12664541.1| GTP-binding protein YchF [Shewanella baltica OS625]
gi|315268735|gb|ADT95588.1| GTP-binding protein YchF [Shewanella baltica OS678]
gi|353535175|gb|EHC04739.1| GTP-binding protein YchF [Shewanella baltica OS625]
Length = 402
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 40 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 99
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++ +++
Sbjct: 100 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD 159
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + +++L+++ L+++ +R
Sbjct: 160 PAGDIEVINTELALADLDSLERAVQRQQKRAKGGDKDAKFEVEVLEKMRPILDEAKMLRS 219
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 220 MELSKEELEAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAATENAIVVAVCAAI 279
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ D+ F+ +LG++E L+ +IRA + LL+L+TYFT G KE+RAWT+P G +
Sbjct: 280 ESELAEMEISDRDEFMADLGIEEPGLDRVIRAGYQLLNLQTYFTAGVKEVRAWTVPVGAS 339
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY+DF+ +KGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 340 APQAAGVIHTDFERGFIRAQVMSYEDFIAHKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 399
Query: 361 FNI 363
FN+
Sbjct: 400 FNV 402
>gi|345873358|ref|ZP_08825271.1| GTP-binding protein YchF [Thiorhodococcus drewsii AZ1]
gi|343917317|gb|EGV28122.1| GTP-binding protein YchF [Thiorhodococcus drewsii AZ1]
Length = 363
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDVIATITKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++G+++
Sbjct: 61 ERVLPTSMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDDVIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ +EK +D+ + ++ + +LL+R+ +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMESVEKALDRAVRAAKTGDKKILFRKELLERVRDHLDTGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+++E ++ L LLT KP +++ANV E+GF +N LLD+++ A + ++ +CA +
Sbjct: 181 MGLDDDETNELRDLFLLTAKPTMYIANVAEDGFADNSLLDKVQALADAEGAIVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI L+ D+ FL LGL E LN ++R +SLL L TYFT G KE+RAWTIP+
Sbjct: 241 EAEIVALDESDRDEFLTELGLDEPGLNRVVRGGYSLLGLDTYFTAGPKEVRAWTIPHNAK 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y+DF+ KGEQG K AGK+RSEGK+Y+V+DGDI++F
Sbjct: 301 APKAASVIHTDFERGFIRAEVIAYEDFVACKGEQGAKEAGKLRSEGKEYVVKDGDIIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|334144461|ref|YP_004537617.1| GTP-binding protein YchF [Thioalkalimicrobium cyclicum ALM1]
gi|333965372|gb|AEG32138.1| GTP-binding protein YchF [Thioalkalimicrobium cyclicum ALM1]
Length = 363
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALT I A NYPFCTIEPN+GI+ VPD R L +VK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTNAGIDAANYPFCTIEPNVGIVPVPDSRQDKLAEMVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + V+RCF++D I H++G+++
Sbjct: 61 ERVMAATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAQVVRCFENDDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL+L+D+ ++K I K + N+ +I L L+++ + + +R
Sbjct: 121 PLSDIEIINTELVLADMESIDKAIQKVQRVAKTGNKEAIARLATLEKVSAGIAEGTLVRN 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE + L+LLTIKP++++ANV E+GF+NN LD + +A Q ++ +CA +
Sbjct: 181 LDLTKEEQAELYDLHLLTIKPMMYIANVNEDGFENNPYLDAVTAFAEEQGAAVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +GL+E LN +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEDKLDFLQGMGLEEPGLNRVIRAGYSLLGLQTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y D++ Y GEQG K AGK+R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTAYDDYVKYNGEQGAKEAGKLRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15801432|ref|NP_287449.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli
O157:H7 str. EDL933]
gi|25330220|pir||A85700 probable GTP-binding protein ychF [imported] - Escherichia coli
(strain O157:H7, substrain EDL933)
gi|12514916|gb|AAG56061.1|AE005338_1 putative GTP-binding protein [Escherichia coli O157:H7 str. EDL933]
Length = 363
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG +GLPNVGK TLFNALTK I A N+P CTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGXVGLPNVGKXTLFNALTKAGIEAANFPXCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + KK ++ + L +L++ + L + +R
Sbjct: 121 PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|114561900|ref|YP_749413.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
frigidimarina NCIMB 400]
gi|114333193|gb|ABI70575.1| GTP-binding protein YchF [Shewanella frigidimarina NCIMB 400]
Length = 363
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDARLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D I H++ +I+
Sbjct: 61 QRILPTSMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDPNIVHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ + + + +L+++ LN+ +R
Sbjct: 121 PAGDIEVINTELALADLDACERAIFRQAKRAKGGDGDAKFEVAVLEKMRPVLNEGQMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL ++ +LN LTIKP +++ANV ++GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 LELTKEELAAVAYLNFLTIKPTMYIANVADDGFENNPHLDVVRAIAATENAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ D+ F+ +LGL+E+ L+ +IRA + LL+L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMEADDRAEFMADLGLEESGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVPVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y+DF+ YKGE G K+AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYEDFITYKGEAGAKDAGKLRVEGKTYVVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381393897|ref|ZP_09919615.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330169|dbj|GAB54748.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 363
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDTRLDQLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++G++N
Sbjct: 61 KRVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL EK I + K+ + + LK+L++I +LN +R
Sbjct: 121 PQEDIDVINTELGLADLETTEKAILRVGKRAKSGDSEAKFELKVLEKITPHLNDGGLLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I ++N LT+KP +++ANV E GF+NN LDQ+ A N+N ++ ICA +
Sbjct: 181 LELSKEERAAISYMNFLTLKPTMYIANVNEEGFENNPYLDQVTAIAKNENAVVVSICAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L+ +K+ F+D LGL E LN +IRA + LL+L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELDEEEKQEFMDELGLTEPGLNRVIRAGYDLLNLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA +++ D++ +GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVAFNDYVGNRGESGAKEAGKWRLEGKEYVVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|188534023|ref|YP_001907820.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia
tasmaniensis Et1/99]
gi|188029065|emb|CAO96933.1| Putative GTP-binding protein [Erwinia tasmaniensis Et1/99]
Length = 363
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ + + KK ++ + L++ + +L K+ +R
Sbjct: 121 PADDIETINTELALSDLDTCERALQRVQKKAKGGDKDAKAEQVALEKCLPHLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A N+ ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAANEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LG++E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDGDREEFMAELGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ +KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIAFKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422022645|ref|ZP_16369152.1| GTP-binding protein YchF [Providencia sneebia DSM 19967]
gi|414095815|gb|EKT57475.1| GTP-binding protein YchF [Providencia sneebia DSM 19967]
Length = 363
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + K+ ++ + L+ L++ + +L ++ +R
Sbjct: 121 PAEDIEVINTELALADLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLEQAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LD + A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDVVYKIAEAEGSVVVPVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMADLGIEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ Y+GEQG K AG++R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIKYRGEQGAKEAGRMRAEGKDYIVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|168237842|ref|ZP_02662900.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197289279|gb|EDY28646.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 363
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + KK ++ + L L++ + +L ++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLAEAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDDERDEFMAELGLEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQ K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQSAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|251789667|ref|YP_003004388.1| GTP-dependent nucleic acid-binding protein EngD [Dickeya zeae
Ech1591]
gi|247538288|gb|ACT06909.1| GTP-binding protein YchF [Dickeya zeae Ech1591]
Length = 363
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG++N
Sbjct: 61 QRTVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ + + KK ++ + L++ + L + +R
Sbjct: 121 PADDIDTINTELALSDLDTCERALHRVQKKAKGGDKDAKVEQAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359435128|ref|ZP_09225357.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20652]
gi|357918265|dbj|GAA61606.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20652]
Length = 363
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + +KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKALFRNSKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPYLDRVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFVAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422008524|ref|ZP_16355508.1| GTP-binding protein YchF [Providencia rettgeri Dmel1]
gi|414094997|gb|EKT56660.1| GTP-binding protein YchF [Providencia rettgeri Dmel1]
Length = 363
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + K+ ++ + L+ L++ + +L ++ +R
Sbjct: 121 PAADIEVINTELALADLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLEQAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+NE+ +I++L+ LT+KP +++ANV E+GF+NN LD + A + ++ +CA +
Sbjct: 181 LELSNEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPFLDVVYKIAEAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMADLGIEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIQYRGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|399154427|ref|ZP_10754494.1| GTP-binding protein YchF [gamma proteobacterium SCGC AAA007-O20]
Length = 363
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I + NYPFCTIEPNIGI+ V D RL+ L +IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDSANYPFCTIEPNIGIVPVNDSRLESLASIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV GASKGEGLGN+FL++IRET+ ++HV+RCF++D I H+SG+++
Sbjct: 61 QKILPTTMEFVDIAGLVKGASKGEGLGNQFLSNIRETDAILHVVRCFENDDIVHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL EK K K + + + L LL++I+ L + P+RL
Sbjct: 121 PLDDIDTINTELALADLLTAEKVYQKAVKNAKSRQKEGLPLKSLLEKILPALEEGQPVRL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ N +EL ++ + LLT KP+++VANV ENGF N L QL+ +A +N ++ +CA++
Sbjct: 181 LEFNEDELKLLRSMQLLTSKPVLYVANVNENGFSENPYLTQLEDFASKENSQVVAVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ DK+ FL +G E+ L+ LI A +SLL L+TYFT G+KE+RAWTI G T
Sbjct: 241 EAEIAELDEEDKQGFLAEMGQVESGLDRLIIAGYSLLGLQTYFTAGEKEVRAWTINIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A AAG IH D ++GFIRA T+++ DFL Y GE+G K+AGK+RSEGK+Y+V+DGD+++FL
Sbjct: 301 APAAAGKIHGDFEKGFIRAETVAFNDFLEYGGEKGSKDAGKLRSEGKEYVVKDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332532470|ref|ZP_08408348.1| GTP-binding and nucleic acid-binding protein YchF
[Pseudoalteromonas haloplanktis ANT/505]
gi|332038113|gb|EGI74560.1| GTP-binding and nucleic acid-binding protein YchF
[Pseudoalteromonas haloplanktis ANT/505]
Length = 363
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRVLTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKALFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPYLDRVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFVAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407699623|ref|YP_006824410.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Black Sea
11']
gi|407248770|gb|AFT77955.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Black Sea
11']
Length = 363
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G +N
Sbjct: 61 QRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL EK + + K+ + + +K+L++I +L++ + +R
Sbjct: 121 PKDDIDVINTELALADLETTEKALHRVAKRAKGGDADAKYEMKVLEKIKPHLDEGLLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N+LT+KP +++ANV E+GF+NN LDQ+K A +N ++ +CA +
Sbjct: 181 LELTKEELAAISYMNMLTLKPTMYIANVNEDGFENNPYLDQVKEIAAGENATVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ ++GL+E LN +IRA +SLL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELEDDEREEFMQDMGLEEPGLNRVIRAGYSLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y F+ + GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVGYDHFVEFNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|120597882|ref|YP_962456.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp.
W3-18-1]
gi|146293946|ref|YP_001184370.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
putrefaciens CN-32]
gi|386314698|ref|YP_006010863.1| GTP-binding protein YchF [Shewanella putrefaciens 200]
gi|120557975|gb|ABM23902.1| GTP-binding protein YchF [Shewanella sp. W3-18-1]
gi|145565636|gb|ABP76571.1| GTP-binding protein YchF [Shewanella putrefaciens CN-32]
gi|319427323|gb|ADV55397.1| GTP-binding protein YchF [Shewanella putrefaciens 200]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++ +++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + +++L+++ L+++ +R
Sbjct: 121 PAGDIEVINTELALADLDSLERAVLRQQKRAKGGDKDAKFEVEVLEKMRPVLDEAKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MDLSKEELEAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAATENAIVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ ++ F+ +LGL+E L+ +IRA + LL+L+TYFT G KE+RAWTIP G +
Sbjct: 241 ESELAEMEIEERDEFMADLGLEEPGLDRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++++DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAFEDFITYKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359442049|ref|ZP_09231929.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20429]
gi|392535315|ref|ZP_10282452.1| GTP-binding protein YchF [Pseudoalteromonas arctica A 37-1-2]
gi|358036061|dbj|GAA68178.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20429]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRVLTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + +KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKALFRNSKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPYLDRVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFVAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|372268006|ref|ZP_09504054.1| GTP-binding protein YchF [Alteromonas sp. S89]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFTCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGIVPVPDTRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ DIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF +D + H++ ++N
Sbjct: 61 QKLIPTTMEFTDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDNDNVIHVANQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + + +++H+I++ LL++I +L+++ P+R
Sbjct: 121 PVADIEVINTELALADLDTVEKALQRYTRAAKGQDKHAIKMKALLEKIQPHLDEAKPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +EL ++ L+LLT+KP +++ANV E+GF+ N LD + A +N ++ IC KL
Sbjct: 181 FGLSEDELADLRELSLLTVKPTMYIANVDEDGFEGNAHLDAVAKIAEEENAVLVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL+ LG++E LN +IRA + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKLEFLEELGMEEPGLNRVIRAGYELLGLHTYFTAGVKEVRAWTIPLGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA +SY DF+ GE G K AGK R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVSYTDFVDNNGEAGAKEAGKWRLEGKEYIVADGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|90414100|ref|ZP_01222083.1| putative GTP-binding protein [Photobacterium profundum 3TCK]
gi|90324895|gb|EAS41423.1| putative GTP-binding protein [Photobacterium profundum 3TCK]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++G+IN
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I ++ K+ + + + +L++++ L + +R
Sbjct: 121 PLEDIEVINLELALADLDTCERAIFRQAKRAKGGDSEAKYEIAVLEKMLPTLTEGGMVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I++L+ LT+KP +++ANV E+GF+NN LD + YA +N ++ ICA +
Sbjct: 181 IELSKEELAAIEYLHFLTVKPTMYIANVSEDGFENNPFLDLVVEYATKENAIVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELEDADREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I Y F+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVIGYDSFIEFKGESGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|24372768|ref|NP_716810.1| GTP-binding and nucleic acid-binding protein YchF [Shewanella
oneidensis MR-1]
gi|24346846|gb|AAN54255.1| GTP-binding and nucleic acid-binding protein YchF [Shewanella
oneidensis MR-1]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++ +++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + +++L+++ L+++ +R
Sbjct: 121 PARDIEVINTELALADLDSLERAVIRQQKRAKGGDKDAKFEVEVLEKMRPVLDEAKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF NN LD ++ A +N ++ +CA +
Sbjct: 181 MDLSKEELEAVAYLNFLTLKPTMYIANVAEDGFDNNPHLDAVRAIAEKENAIVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ ++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELAEMDAEERDEFMADLGLEEPGLDRVIRAGYQLLSLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +++ DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVVAFDDFIAYKGEAGAKEAGKLRVEGKTYIVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386815304|ref|ZP_10102522.1| GTP-binding protein YchF [Thiothrix nivea DSM 5205]
gi|386419880|gb|EIJ33715.1| GTP-binding protein YchF [Thiothrix nivea DSM 5205]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIQAANYPFCTIEPNVGIVPMPDPRLDALATIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GAS+GEGLGNKFLAHIRET+ + V+RCF++D I H++G+I+
Sbjct: 61 ERIVPTTMEFVDIAGLVAGASQGEGLGNKFLAHIRETDAIAQVVRCFENDDIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL+L+DL EK +++ + ++ + + +R+ +L+ R
Sbjct: 121 PASDIDTINTELVLADLETAEKAVNRLTRSAKSGDKDLVAQKAMAERMYKHLSDGNSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + EE + ++ L+L+TIKP++F+ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LEMTPEERLLLRELHLITIKPLMFIANVNEDGFENNPFLDVVQEIAAREGAEVVPVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L ++++ FL ++GL+E LN +IRA +SLL L+TYFT G KE+RAWT+ T
Sbjct: 241 EEELSQLEDVERDEFLASMGLEEPGLNRVIRAGYSLLGLQTYFTAGVKEVRAWTVRKNAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA TI+Y DF+ Y+GEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYDDFIAYRGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|414071925|ref|ZP_11407883.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. Bsw20308]
gi|410805688|gb|EKS11696.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. Bsw20308]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKALFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPYLDRVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFVAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|406596328|ref|YP_006747458.1| GTP-binding protein YchF [Alteromonas macleodii ATCC 27126]
gi|406373649|gb|AFS36904.1| GTP-binding protein YchF [Alteromonas macleodii ATCC 27126]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G ++
Sbjct: 61 QRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL EK + + K+ + + +K+L++I +L++ + +R
Sbjct: 121 PKDDIDVINTELALADLETTEKALHRVAKRAKGGDAEAKYEMKVLEKIKPHLDEGLLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N+LT+KP +++ANV E+GF+NN LDQ+K A +N ++ +CA +
Sbjct: 181 LELTKEELAAISYMNMLTLKPTMYIANVNEDGFENNPYLDQVKEIAAGENATVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ ++GL+E LN +IRA +SLL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELEDDEREEFMQDMGLEEPGLNRVIRAGYSLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y+ F+ + GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVGYEHFVEFNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|302038467|ref|YP_003798789.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Nitrospira defluvii]
gi|300606531|emb|CBK42864.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Nitrospira defluvii]
Length = 363
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M++KCG++GLPNVGKSTLFNALTK I+AENYPFCTIEPNIGI+EVPD R++ L +IVK
Sbjct: 1 MSVKCGIVGLPNVGKSTLFNALTKSGIAAENYPFCTIEPNIGIVEVPDARMQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A + VDIAGLV+GASKGEGLGN+FLA+IRET+ +++V+RCF+DD + H++G+++
Sbjct: 61 QRMQYATTEFVDIAGLVAGASKGEGLGNQFLANIRETDGIVNVVRCFEDDNVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I TEL L+DL +EK ++ K ++ + +L +LL ++ LN+ P R
Sbjct: 121 PISDIATIVTELALADLTTVEKAQERNVKLVRSGDKDAAKLGELLVQVAACLNEGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ + +K L LLT+KP+++VANV E GF NN LL +++ YA ++ P++ ICA L
Sbjct: 181 LKLDPAQRALLKPLCLLTMKPVMYVANVAEKGFTNNPLLTRVEEYAAHEGAPVVAICAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L++ +K+ FL ++G+ E LN LIRA++ LL L+TYFT G KE+RAWTI G T
Sbjct: 241 ESEIAVLSDEEKREFLADIGMNEPGLNRLIRAAYQLLGLQTYFTAGVKEVRAWTIHIGDT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH D ++GFIRA I Y DF+ KGE G K GK+R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHGDFEKGFIRAEVIGYNDFIACKGEAGAKEKGKMRLEGKEYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|384082304|ref|ZP_09993479.1| GTP-binding protein YchF [gamma proteobacterium HIMB30]
Length = 363
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A+N+PFCTIEPN G++ +PD R L +IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAQNFPFCTIEPNAGVVPIPDPRQDQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D+ I H++G+++
Sbjct: 61 ERVVPTAMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDENIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK + K K+ ++ + L+ + ++I+ LN+ P+R
Sbjct: 121 PESDIEVINTELALADLESVEKQMHKAQKQAKGGDKDAKALMAVCEKILPVLNEGRPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+++EL IK L+LLTIKP +++ANV E+GF++N L Q++ A ++N ++ IC K+
Sbjct: 181 VELSDQELAVIKTLHLLTIKPTLYIANVAEDGFEDNPWLSQVREIAASENAEVVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL+ LGL E L+ +IRA + LL L+TYFT G KE+RAWTIP T
Sbjct: 241 EAEIAELDDDEKVEFLEELGLAEAGLDRVIRAGYHLLGLQTYFTAGPKEVRAWTIPVDAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I++ DF+ GEQ K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVIAFDDFVTLGGEQAAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|397668328|ref|YP_006509865.1| putative GTP-binding protein [Legionella pneumophila subsp.
pneumophila]
gi|395131739|emb|CCD10032.1| putative GTP-binding protein [Legionella pneumophila subsp.
pneumophila]
Length = 363
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL +L++IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV GAS GEGLGN+FLA+IRET+ + HV+RCF + + H+ G ++
Sbjct: 61 QQVIHATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ +I LK L++I +L+ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKSLLKVGKNSKSGNKEAIFELKTLEKIKAHLDAGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE K L LLT KP++++ANV +NG++NN LL +++ A +N I+ +CA
Sbjct: 181 LELTPEEEQVSKRLFLLTAKPVLYIANVDDNGYENNPLLAKVQALASQENASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+ +LGL E LN +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEEDRQEFMVDLGLSEPGLNKVIRAGYELLGLQTYFTAGVKEVRAWTIRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ + GEQG K AGK+R EGK+Y+V DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVISYDDFIRFGGEQGAKEAGKLRLEGKEYIVCDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|212711986|ref|ZP_03320114.1| hypothetical protein PROVALCAL_03062 [Providencia alcalifaciens DSM
30120]
gi|422018288|ref|ZP_16364845.1| GTP-binding protein YchF [Providencia alcalifaciens Dmel2]
gi|212685508|gb|EEB45036.1| hypothetical protein PROVALCAL_03062 [Providencia alcalifaciens DSM
30120]
gi|414104580|gb|EKT66145.1| GTP-binding protein YchF [Providencia alcalifaciens Dmel2]
Length = 363
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L+ L++ + +L ++ +R
Sbjct: 121 PAADIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLEQAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVYEIAKAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ Y+GEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIKYRGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|126175457|ref|YP_001051606.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica
OS155]
gi|386342201|ref|YP_006038567.1| GTP-binding protein YchF [Shewanella baltica OS117]
gi|125998662|gb|ABN62737.1| GTP-binding protein YchF [Shewanella baltica OS155]
gi|334864602|gb|AEH15073.1| GTP-binding protein YchF [Shewanella baltica OS117]
Length = 363
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++ +++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + +++L+++ L+++ +R
Sbjct: 121 PAGDIEVINTELALADLDSLERAVQRQQKRAKGGDKDAKFEVEVLEKMRPILDEAKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+ F+NN LD ++ A +N ++ +CA +
Sbjct: 181 MELSKEELEAVAYLNFLTLKPTMYIANVAEDVFENNPHLDAVRAIAATENAIVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ D+ F+ +LG++E L+ +IRA + LL+L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMEISDRDEFMADLGIEEPGLDRVIRAGYQLLNLQTYFTAGVKEVRAWTVPVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY+DF+ +KGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMSYEDFIAHKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|271500550|ref|YP_003333575.1| GTP-binding protein YchF [Dickeya dadantii Ech586]
gi|270344105|gb|ACZ76870.1| GTP-binding protein YchF [Dickeya dadantii Ech586]
Length = 363
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+++ I H++G++N
Sbjct: 61 QRTIPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ + + KK ++ + L++ + L K+ +R
Sbjct: 121 PAEDIDTINTELALADLDTCERALHRVQKKAKGGDKDAKIEQAALEKCLPQLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A ++ ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAASEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDAERDEFMAELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|94500013|ref|ZP_01306548.1| GTP-binding protein, HSR1-like [Bermanella marisrubri]
gi|94427871|gb|EAT12846.1| GTP-binding protein, HSR1-like [Oceanobacter sp. RED65]
Length = 364
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 264/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNSGIVPMPDPRLDKLAAIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H+ ++N
Sbjct: 61 EKVIPTTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVVRCFEDPNVIHVENKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI ELIL+DL +K + + ++ N+ ++ LL++++ +L PIR
Sbjct: 121 PADDIDVINLELILADLESADKQLQRVSRTAKSGNKDAVADKALLEKMVAHLENDQPIRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M LN++E I+ +++TIKP +++ANV E+GF+NN LD ++ A+ +N ++ +C K+
Sbjct: 181 MDLNDDEQKRIRMFHMITIKPTMYIANVAEDGFENNPHLDTVRDIANKENAVVVPVCNKI 240
Query: 241 EEEISDLNNI-DKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
E+EIS+L++ D FL+ +G E LN +IRA + LL L+TYFT G KE+RAWT+ G
Sbjct: 241 EQEISELDDPEDVAMFLEEMGQSEPGLNRVIRAGYELLGLQTYFTAGVKEVRAWTVKKGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA T+SY DF+ + GE GCK AGK+R EGK Y+V+DGD+++F
Sbjct: 301 TAPQAAGVIHTDFERGFIRAETMSYDDFIEHNGESGCKAAGKLRVEGKDYIVKDGDVMHF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|183598956|ref|ZP_02960449.1| hypothetical protein PROSTU_02398 [Providencia stuartii ATCC 25827]
gi|386745305|ref|YP_006218484.1| GTP-binding protein YchF [Providencia stuartii MRSN 2154]
gi|188021170|gb|EDU59210.1| GTP-binding protein YchF [Providencia stuartii ATCC 25827]
gi|384481998|gb|AFH95793.1| GTP-binding protein YchF [Providencia stuartii MRSN 2154]
Length = 363
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + K+ ++ + L++L++ + +L + +R
Sbjct: 121 PAEDIEVINTELALADLDTCERAIHRIQKRAKGGDKDAKAELEVLEKCLPHLENAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I++L+ LT+KP +++ANV E+GF+NN LD + A ++ ++ +CA +
Sbjct: 181 LDLSAEEKALIRYLSFLTLKPTMYIANVNEDGFENNPYLDTVNKIAESEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMADLGIEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQG K AG++R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIKYRGEQGAKEAGRMRAEGKDYIVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|28199875|ref|NP_780189.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa
Temecula1]
gi|182682627|ref|YP_001830787.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa
M23]
gi|28057996|gb|AAO29838.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182632737|gb|ACB93513.1| GTP-binding protein YchF [Xylella fastidiosa M23]
Length = 363
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVSVPDPRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P +I+ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ +I H++G+++
Sbjct: 61 QKLLPTVIEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFEHGEIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+DL +EK ++ + +I +L+R+ LN+ R
Sbjct: 121 PLADIEIIDTELILADLDTVEKACNRIMRAAKGGGGEAIARKSVLERLQVALNEGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E ++ L LLT+KP++++ANV ENGF++N+ L+ L++ A + N ++ I A +
Sbjct: 181 AGLDEDERALVRDLFLLTLKPVMYIANVLENGFQDNVYLEALRVRASSDNAQLVPISAVI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L ++D+ FL +LGL+E LN ++RA+++LL L+TYFT G KE+RAWT+ +G T
Sbjct: 241 EEELAQLEDVDRDAFLVDLGLEEPGLNRVVRAAYALLGLQTYFTAGVKEVRAWTVKSGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ YKGE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYKGEAGARDAGRMRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|389737030|ref|ZP_10190523.1| GTP-binding protein YchF [Rhodanobacter sp. 115]
gi|388437812|gb|EIL94576.1| GTP-binding protein YchF [Rhodanobacter sp. 115]
Length = 362
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 267/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDLRLNALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PIADIETIDTELALADLESVDKALNRAERAAKANDKEALAKKPVLQKLSAGLNEGKSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV ++GF+NN LLD ++ A + ++ +CA +
Sbjct: 180 LGLDEEERALVRDLFLLTLKPLMYIANVADDGFENNPLLDAVRARALVEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L++ D+ FL ++GL E LN +IRA + LL+L+TYFT G KE+RAWT+ G+T
Sbjct: 240 EEEMAQLDDADRDEFLKDMGLDEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVKRGST 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA T+ Y DF+ YKGE G AG++R EGK Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHTDFEKGFIRAETVGYDDFVQYKGETGAAAAGRLRKEGKDYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|54310000|ref|YP_131020.1| GTP-dependent nucleic acid-binding protein EngD [Photobacterium
profundum SS9]
gi|46914439|emb|CAG21218.1| putative GTP-binding protein [Photobacterium profundum SS9]
Length = 363
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++G+IN
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I ++ K+ + + + +L++++ L + +R
Sbjct: 121 PLEDIEVINLELALADLDTCERAIFRQAKRAKGGDSEAKYEIAVLEKMLPTLTEGGMVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I++L+ LT+KP +++ANV E+GF+NN LD + YA +N ++ ICA +
Sbjct: 181 IELSKEELAAIEYLHFLTVKPTMYIANVSEDGFENNPFLDMVFEYAAKENAIVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELEDADREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG IHTD ++GFIRA I Y F+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGKIHTDFEKGFIRAEVIGYDSFIEFKGESGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|71730263|gb|EAO32348.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1]
Length = 363
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P +I+ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ +I H++G+++
Sbjct: 61 QKLLPTVIEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFEHGEIIHVTGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+DL +EK ++ + + +I +L+R+ LN+ R
Sbjct: 121 PLADIEIIDTELILADLDTVEKACNRIMRAAKGGGKEAIARKSVLERLQVALNEGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E ++ L LLT+KP++++ANV ENGF++N+ L+ L++ A + N ++ I A +
Sbjct: 181 AGLDEDERALVRDLFLLTLKPVMYIANVLENGFQDNVYLEALRVRASSDNAQLVPISAVI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L ++D+ FL +LGL+E LN ++RA+++LL L+TYFT G KE+RAWT+ +G T
Sbjct: 241 EEELAQLEDVDRDAFLVDLGLEEPGLNRVVRAAYALLGLQTYFTAGVKEVRAWTVKSGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ YKGE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYKGEAGARDAGRMRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|259908627|ref|YP_002648983.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia pyrifoliae
Ep1/96]
gi|385788201|ref|YP_005819310.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia sp.
Ejp617]
gi|387871512|ref|YP_005802886.1| GTP-binding protein 9 [Erwinia pyrifoliae DSM 12163]
gi|224964249|emb|CAX55756.1| Putative GTP-binding protein [Erwinia pyrifoliae Ep1/96]
gi|283478599|emb|CAY74515.1| putative GTP-binding protein 9 [Erwinia pyrifoliae DSM 12163]
gi|310767473|gb|ADP12423.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia sp.
Ejp617]
Length = 363
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ + + KK ++ + L++ + +L K+ +R
Sbjct: 121 PADDIDTINTELALSDLDTCERALQRVQKKAKGGDKDAKAEQVALEKCLPHLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LG++E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDGDREEFMAELGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIAYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359455492|ref|ZP_09244711.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20495]
gi|358047489|dbj|GAA80960.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20495]
Length = 363
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKALFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAISSINFLTIKPTMYIANVVEDGFENNPYLDRVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFVAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|77164045|ref|YP_342570.1| GTP-dependent nucleic acid-binding protein EngD [Nitrosococcus
oceani ATCC 19707]
gi|254435771|ref|ZP_05049278.1| GTP-binding protein YchF [Nitrosococcus oceani AFC27]
gi|76882359|gb|ABA57040.1| GTP-binding protein, HSR1-related protein [Nitrosococcus oceani
ATCC 19707]
gi|207088882|gb|EDZ66154.1| GTP-binding protein YchF [Nitrosococcus oceani AFC27]
Length = 362
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 267/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTI+PN+G++ +PD RL + IV+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIDPNVGMVPMPDPRLDKIAAIVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P + VDIAGLV+GAS+GEGLGN+FLAHIRET + HV+RCF+D + H++G+I+
Sbjct: 61 QQVLPTTMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQNVIHVAGQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + + ++ ++ L LL+++ +LN+ +R
Sbjct: 121 PLGDIEVIDTELALADLETVEKALSRATRAA-KADKDALVLKSLLEKVREHLNEGKSVRT 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L+LLT KP++++ANV E+GF+NN L L+ +A + ++ +CA +
Sbjct: 180 LVLDPEEWKELQSLHLLTSKPVLYIANVAEDGFENNPWLKALEEFAARERAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S L++ +++ FL LG++E LN +IRA + LL L+T+FT G KE+RAWT+P G T
Sbjct: 240 EAELSQLDDAEREEFLAELGIEEPGLNRVIRAGYKLLGLQTFFTAGPKEVRAWTVPIGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY+DF+ +GEQG K AGK R EGK Y+V+DGD+++F
Sbjct: 300 APQAAGVIHTDFEKGFIRAEVISYEDFIACQGEQGAKEAGKWRLEGKDYVVQDGDVVHFR 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|407683276|ref|YP_006798450.1| GTP-binding protein YchF [Alteromonas macleodii str. 'English
Channel 673']
gi|407687216|ref|YP_006802389.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407244887|gb|AFT74073.1| GTP-binding protein YchF [Alteromonas macleodii str. 'English
Channel 673']
gi|407290596|gb|AFT94908.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 363
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G ++
Sbjct: 61 QRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL EK + + K+ + + +K+L++I +L++ + +R
Sbjct: 121 PKDDIDVINTELALADLETTEKALHRVAKRAKGGDADAKYEMKVLEKIKPHLDEGLLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N+LT+KP +++ANV E+GF+NN LDQ+K A +N ++ +CA +
Sbjct: 181 LELTKEELAAISYMNMLTLKPTMYIANVNEDGFENNPYLDQVKEIAAGENATVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ ++GL+E LN +IRA +SLL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELEDDEREEFMQDMGLEEPGLNRVIRAGYSLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y F+ + GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVGYDHFVEFNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15839230|ref|NP_299918.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa
9a5c]
gi|9107872|gb|AAF85438.1|AE004071_6 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 363
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P +I+ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ +I H++G+++
Sbjct: 61 QKLLPTVIEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFEHGQIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+DL +EK ++ + ++ +I +L+R+ LN+ R
Sbjct: 121 PLADIEIIDTELILADLDTVEKACNRMMRAAKGGDKEAIACKSVLERLQVALNEGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E ++ L LLT+KP++++ANV ENGF++N+ L+ L++ A + N ++ I A +
Sbjct: 181 AGLDEDERALVRDLFLLTLKPVMYIANVLENGFQDNVYLEALRVRAASDNAQLVPISAVI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L ++D+ FL +LGL+E LN ++RA+++LL L+TYFT G KE+RAWT+ +G T
Sbjct: 241 EEELAQLEDVDRDAFLVDLGLEEPGLNRVVRAAYALLGLQTYFTAGVKEVRAWTVKSGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ YKGE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYKGEAGARDAGRMRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
N+
Sbjct: 361 INV 363
>gi|300716377|ref|YP_003741180.1| GTP-binding protein [Erwinia billingiae Eb661]
gi|299062213|emb|CAX59330.1| Putative GTP-binding protein [Erwinia billingiae Eb661]
Length = 363
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ + + KK ++ + L++ + +L K+ +R
Sbjct: 121 PADDIETINTELALSDLDTCERALQRVQKKAKGGDKDAKAEQAALEKCLPHLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDIVRAIAEAEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LG++E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDADREEFMAELGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ KGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIACKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359451801|ref|ZP_09241190.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20480]
gi|358042427|dbj|GAA77439.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20480]
Length = 363
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENVIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + KK ++ + E L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKAMFRNAKKAKGGDKDAKEQNAALEKVKVHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +N LTIKP +++ANV E+GF+NN LLD+++ A ++ ++ +CA +
Sbjct: 181 LELTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPLLDRVRAIAESEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI+Y D++ KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAYDDYINCKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|167950645|ref|ZP_02537719.1| translation-associated GTPase [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345862759|ref|ZP_08814973.1| GTP-dependent nucleic acid-binding protein EngD [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345126101|gb|EGW55967.1| GTP-dependent nucleic acid-binding protein EngD [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 363
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDAIAGIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+ + P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ V V+RCF++D + H++G+I+
Sbjct: 61 QAVLPTTMQFVDIAGLVEGASKGEGLGNKFLANIRETDAVAQVVRCFENDDVVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +VI EL L+DL +EK +DK ++ ++ + LL+RI +L +R
Sbjct: 121 PLADVQVINNELALADLESVEKALDKTIRQAKTGDKKVLARKALLERICDHLYDGKSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+++EL I+ L LLT+KPI+++ANV E+GF++N LD L A + ++ +CA +
Sbjct: 181 MALSDDELQEIRELFLLTVKPILYIANVAEDGFEDNPHLDALNTLASAEGAEVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L +++ FL +LGL E LN ++RA + LL L TYFT G+KE+RAWTIP +
Sbjct: 241 EAEIVELEEDEREEFLSDLGLDEPGLNRVVRAGYQLLGLETYFTAGEKEVRAWTIPANAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ ++GEQG + AGK+RSEGK Y V+DGDI++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVISYDDFVKFRGEQGAREAGKLRSEGKDYQVKDGDIIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|392537149|ref|ZP_10284286.1| GTP-binding protein YchF [Pseudoalteromonas marina mano4]
Length = 363
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENVIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + + KK ++ + E L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKAMFRNAKKAKGGDKDAKEQNAALEKVKVHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +N LTIKP +++ANV E+GF+NN LLD+++ A ++ ++ +CA +
Sbjct: 181 LELTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPLLDRVRAIADSEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDKLEFMADLGLEEPGLNLVIRGGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI+Y D++ KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAYDDYINCKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|336316601|ref|ZP_08571494.1| GTP-binding protein YchF [Rheinheimera sp. A13L]
gi|335879105|gb|EGM77011.1| GTP-binding protein YchF [Rheinheimera sp. A13L]
Length = 363
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL+ L +IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLQQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I EL+LSD+ +K I + +KK ++ + +++L+++ +L + +R
Sbjct: 121 PADDIDTINMELVLSDMDSADKAIFRVSKKAKAGDKDAKAEMEVLEKVKKHLESGLTLRQ 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+++E + ++N LTIKP +++ANV E+GF+NN LD +K A + ++ ICA +
Sbjct: 181 LDLSDDEKALVSYMNFLTIKPTMYIANVLEDGFENNPHLDVVKAIAAKEGAIVVSICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL+++GL+E LN +IR +SLL+L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELEDEEKAEFLESMGLEEPGLNRVIRGGYSLLNLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ KGE G K AGK+R EGK Y+ +DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVVSYDDFIACKGEAGAKEAGKLRVEGKTYVCKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|113969352|ref|YP_733145.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp.
MR-4]
gi|114046579|ref|YP_737129.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp.
MR-7]
gi|117919461|ref|YP_868653.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp.
ANA-3]
gi|113884036|gb|ABI38088.1| GTP-binding protein YchF [Shewanella sp. MR-4]
gi|113888021|gb|ABI42072.1| GTP-binding protein YchF [Shewanella sp. MR-7]
gi|117611793|gb|ABK47247.1| GTP-binding protein YchF [Shewanella sp. ANA-3]
Length = 363
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ ++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ K+ ++ + + +L+++ L++ +R
Sbjct: 121 PARDIEVINTELALADLDSLERAVIRQQKRAKGGDKDAKFEVDVLEKMRPILDEGHMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MELSKEELEAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAEKENAIVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ ++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELAEMEAEERDEFMADLGLEEPGLDRVIRAGYQLLSLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +++ DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAFDDFITYKGEAGAKEAGKLRVEGKTYIVQDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|219870977|ref|YP_002475352.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
parasuis SH0165]
gi|219691181|gb|ACL32404.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
parasuis SH0165]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL E+ I + K+ ++++ L ++++I+ L IR
Sbjct: 121 PLDDIEVINTELALADLDSCERAIQRLQKRAKGGDKNAKFELSIMEKILPTLEAGGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LDQ++ A +N ++ +CA +
Sbjct: 181 VVLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y+DF+ +KGE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVIAYEDFIQFKGENGAKEAGKWRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|120555280|ref|YP_959631.1| GTP-dependent nucleic acid-binding protein EngD [Marinobacter
aquaeolei VT8]
gi|120325129|gb|ABM19444.1| GTP-binding protein YchF [Marinobacter aquaeolei VT8]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T+ + HV+RCF+D + H++ +++
Sbjct: 61 ERVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFEDGNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK I + + ++ + L++ ++++ LN+ P+R
Sbjct: 121 PASDIEVINTELALADLDTVEKAIKRVQRVAKSGDKEAKAQLEMFEKLLPVLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +++ I+ L LLT+KP +++ANV E+GF+NN LD+++ A ++N ++ IC KL
Sbjct: 181 MGLDKDQMALIRELCLLTVKPTMYIANVNEDGFENNPHLDKVREIAASENAVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FLD +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDEEKSMFLDEMGMEEPGLDRVIRAGYGLLGLQTYFTAGVKEVRAWTVRIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVVSYDDFVQYNGEAGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350564649|ref|ZP_08933466.1| GTP-binding protein YchF [Thioalkalimicrobium aerophilum AL3]
gi|349777668|gb|EGZ32031.1| GTP-binding protein YchF [Thioalkalimicrobium aerophilum AL3]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALT I A NYPFCTIEPN+GI+ VPD R L +VK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTNAGIDAANYPFCTIEPNVGIVPVPDPRQDKLAEMVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ A ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + V+RCF++D I H++G+++
Sbjct: 61 ERVMAATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAQVVRCFENDDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL+L+D+ ++K I K + N+ +I L L+++ + + +R
Sbjct: 121 PLSDIEIINTELVLADMESIDKAILKVQRVAKTGNKEAIARLATLEKVAAGIAEGTLVRN 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E + L+LLTIKP++++ANV E+GF+NN LD + +A Q ++ +CA +
Sbjct: 181 LDLSKDEQAELYDLHLLTIKPMMYIANVNEDGFENNPYLDAVTAFAQEQGAAVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL +GL E LN +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEDKLDFLQGMGLDEPGLNRVIRAGYSLLGLQTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y D++ Y GEQG K AGK+R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTAYDDYVKYNGEQGAKEAGKLRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387813297|ref|YP_005428779.1| GTP-dependent nucleic acid-binding protein which may act as a
translation factor [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338309|emb|CCG94356.1| GTP-dependent nucleic acid-binding protein which may act as a
translation factor [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T+ + HV+RCF+D + H++ +++
Sbjct: 61 ERVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFEDGNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK I + + ++ + L++ ++++ LN+ P+R
Sbjct: 121 PASDIEVINTELALADLDTVEKAIKRVQRVAKSGDKEAKAQLEMFEKLLPVLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +++ I+ L LLT+KP +++ANV E+GF+NN LD+++ A ++N ++ IC KL
Sbjct: 181 MGLDKDQMTLIRELCLLTVKPTMYIANVNEDGFENNPHLDKVREIAASENAVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FLD +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDEEKSMFLDEMGMEEPGLDRVIRAGYGLLGLQTYFTAGVKEVRAWTVRIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVVSYDDFVQYNGEAGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|167856606|ref|ZP_02479307.1| translation-associated GTPase [Haemophilus parasuis 29755]
gi|167852272|gb|EDS23585.1| translation-associated GTPase [Haemophilus parasuis 29755]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL E+ I + K+ ++ + L ++++I+ L IR
Sbjct: 121 PLDDIEVINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPTLEAGGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LDQ++ A +N ++ +CA +
Sbjct: 181 VVLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y+DF+ +KGE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVIAYEDFIQFKGENGAKEAGKWRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|71275256|ref|ZP_00651543.1| Conserved hypothetical protein 92 [Xylella fastidiosa Dixon]
gi|170731254|ref|YP_001776687.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa
M12]
gi|71164065|gb|EAO13780.1| Conserved hypothetical protein 92 [Xylella fastidiosa Dixon]
gi|71728033|gb|EAO30244.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1]
gi|167966047|gb|ACA13057.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 363
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P I+ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ +I H++G+++
Sbjct: 61 QKLLPTAIEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFEHGEIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+DL +EK ++ + + +I +L+R+ LN+ R
Sbjct: 121 PLADIEIIDTELILADLDTVEKACNRIMRAAKGGGKEAIARKSVLERLQVALNEGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E ++ L LLT+KP++++ANV ENGF++N+ L+ L++ A + N ++ I A +
Sbjct: 181 AGLDEDERALVRDLFLLTLKPVMYIANVLENGFQDNVYLETLRVRAASDNAQLVPISAVI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L ++D+ FL +LGL+E LN ++RA+++LL L+TYFT G KE+RAWT+ +G T
Sbjct: 241 EEELAQLEDVDRDAFLVDLGLEEPGLNRVVRAAYALLGLQTYFTAGVKEVRAWTVKSGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ YKGE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYKGEAGARDAGRMRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|444921655|ref|ZP_21241490.1| GTP-dependent nucleic acid-binding protein engD [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507382|gb|ELV07559.1| GTP-dependent nucleic acid-binding protein engD [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++CG++GLPNVGKSTLFNALT I A NYPFCTIEPN+G + VPD R++ L +IV
Sbjct: 1 MAIQCGIVGLPNVGKSTLFNALTNAGIDAANYPFCTIEPNVGRVLVPDTRIQPLVDIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ + VDIAGLV GAS+GEGLGN+FLA+IRET+ + HV+RCF++D I H+SG+I+
Sbjct: 61 ERVQQTFVDFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVVRCFENDDIIHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI TEL L+DLA E+++ + K N+ + + +LK+II L++ +R
Sbjct: 121 PIDDIEVINTELALADLASAERFLHRVEKVAKSGNKEAQAQVAVLKKIIPVLDEGKSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE + ++ L LTIKP++++ANV E+GF+NN LLD+++ YA + ++ ICA +
Sbjct: 181 IQLDDEEKLLVRDLQFLTIKPVMYIANVNEDGFENNPLLDKVEAYAAAEGAFVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + DK FL +G +E LN +IR +SLL+L TYFT G KE+RAWTI G+T
Sbjct: 241 ESDIAELEDEDKADFLAEMGFEEPGLNRVIRTGYSLLNLETYFTAGVKEVRAWTIKKGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y D++ YKGE G K GKIR EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVIAYDDYVTYKGEAGAKEKGKIRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|240948403|ref|ZP_04752781.1| translation-associated GTPase [Actinobacillus minor NM305]
gi|240297229|gb|EER47787.1| translation-associated GTPase [Actinobacillus minor NM305]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL E+ I + K+ ++ + L ++++I+ L IR
Sbjct: 121 PLDDIEVINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPTLEHGGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +EL +IK N LT+KP +++ANV E+GF+NN LDQ++ A +N ++ +CA +
Sbjct: 181 VALDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y+DF+ +KGE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVIAYEDFIQFKGENGAKEAGKWRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|251793995|ref|YP_003008727.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
aphrophilus NJ8700]
gi|422337056|ref|ZP_16418028.1| GTP-dependent nucleic acid-binding protein engD [Aggregatibacter
aphrophilus F0387]
gi|247535394|gb|ACS98640.1| GTP-binding protein YchF [Aggregatibacter aphrophilus NJ8700]
gi|353345608|gb|EHB89899.1| GTP-dependent nucleic acid-binding protein engD [Aggregatibacter
aphrophilus F0387]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+K+ IR
Sbjct: 121 PLNDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSKAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ YKGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQYKGENGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387126395|ref|YP_006295000.1| GTP-binding and nucleic acid-binding protein YchF [Methylophaga sp.
JAM1]
gi|386273457|gb|AFI83355.1| GTP-binding and nucleic acid-binding protein YchF [Methylophaga sp.
JAM1]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTIEPN+GI+ VPD R+ L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIEPNVGIVPVPDPRMDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK I K K ++ + L LL +I +L++ P+R
Sbjct: 121 PVDDIEVINTELALADLESVEKAITKTTKDAKGGDKVAKARLDLLTQIREHLDQGAPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L++++L + L+LLTIKP +++ANV E+GF+NN LD + A +N ++ ICA +
Sbjct: 181 MNLDDDQLALLTGLHLLTIKPTMYIANVAEDGFENNPALDAVMALADKENAIVVSICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + DK FL+ LG E LN +IR+ + LL L TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIADLADEDKAEFLEELGQDEPGLNRVIRSGYQLLGLHTYFTAGVKEVRAWTVEVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG+IHTD ++GFIRA I Y+DF+ + GEQG K+AGK R EGK+Y+++DGD+++F
Sbjct: 301 APEGAGVIHTDFQKGFIRAEVIGYEDFVQFNGEQGAKDAGKWRLEGKEYVIKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|442608878|ref|ZP_21023619.1| GTP-binding and nucleic acid-binding protein YchF
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441749490|emb|CCQ09681.1| GTP-binding and nucleic acid-binding protein YchF
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDARLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+++ I H++G++N
Sbjct: 61 VRIVPTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFENENIVHVAGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+LSD+ +K + + KK ++ + +++L+++ +L+ + +R
Sbjct: 121 PAEDIDVINTELVLSDMESCDKALLRVAKKAKGGDKDAKFEIEVLEKVKAHLDSGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I ++N LTIKP +++ANV E+GF+NN LDQ++ A N+N ++ +CA +
Sbjct: 181 LKLEKEEYAAISYMNFLTIKPTMYIANVNEDGFENNPYLDQVREIAANENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ DKK F+ +LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELDDEDKKEFMVDLGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI + D++ + GE G K AGK+R EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIGFNDYVQFNGEAGAKEAGKMRQEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|268592701|ref|ZP_06126922.1| GTP-binding protein YchF [Providencia rettgeri DSM 1131]
gi|291311843|gb|EFE52296.1| GTP-binding protein YchF [Providencia rettgeri DSM 1131]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + K+ ++ + L+ L++ + +L ++ +R
Sbjct: 121 PAADIEVINTELALADLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLEQAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+NE+ +I++L+ LT+KP +++ANV E+GF+NN L + A + ++ +CA +
Sbjct: 181 LDLSNEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPFLGVVYKIAEAEGSLVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMADLGIEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIQYRGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|307131088|ref|YP_003883104.1| GTP-binding protein [Dickeya dadantii 3937]
gi|306528617|gb|ADM98547.1| predicted GTP-binding protein [Dickeya dadantii 3937]
Length = 363
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+++ I H++G++N
Sbjct: 61 QRTVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ + + KK ++ + L++ + L + +R
Sbjct: 121 PADDIDTINTELALSDLDTCERALHRVQKKAKGGDKDAKVEQAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAREGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416051981|ref|ZP_11577956.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347992592|gb|EGY33984.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 363
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 273/363 (75%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELAVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A ++ ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKESSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++LN+ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELNDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|345876540|ref|ZP_08828308.1| GTP-binding and nucleic acid-binding protein YchF [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344226507|gb|EGV52842.1| GTP-binding and nucleic acid-binding protein YchF [endosymbiont of
Riftia pachyptila (vent Ph05)]
Length = 389
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + IV
Sbjct: 27 MGFKCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDAIAGIVNP 86
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+ + P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ V V+RCF++D + H++G+I+
Sbjct: 87 QAVLPTTMQFVDIAGLVEGASKGEGLGNKFLANIRETDAVAQVVRCFENDDVVHVAGKID 146
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +VI EL L+DL +EK +DK ++ ++ + LL+RI +L +R
Sbjct: 147 PLADVQVINNELALADLESVEKALDKTIRQAKTGDKKVLARKALLERIRDHLYDGKSVRS 206
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+++EL I+ L LLT+KPI+++ANV E+GF++N LD L A + ++ +CA +
Sbjct: 207 MALSDDELQEIRELFLLTVKPILYIANVAEDGFEDNPHLDALNTLASAEGAEVVSVCAAI 266
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L +++ FL +LGL E LN ++RA + LL L TYFT G+KE+RAWTIP +
Sbjct: 267 EAEIVELEEDEREEFLSDLGLDEPGLNRVVRAGYQLLGLETYFTAGEKEVRAWTIPANAS 326
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY DF+ ++GEQG + AGK+RSEGK Y V+DGDI++F
Sbjct: 327 APQAAGVIHTDFERGFIRAEVISYDDFVKFRGEQGAREAGKLRSEGKDYQVKDGDIIHFR 386
Query: 361 FNI 363
FN+
Sbjct: 387 FNV 389
>gi|292488078|ref|YP_003530955.1| GTP-binding protein 9 [Erwinia amylovora CFBP1430]
gi|292899289|ref|YP_003538658.1| GTP-dependent nucleic acid-binding protein [Erwinia amylovora ATCC
49946]
gi|428785013|ref|ZP_19002504.1| putative GTP-binding protein 9 [Erwinia amylovora ACW56400]
gi|291199137|emb|CBJ46251.1| GTP-dependent nucleic acid-binding protein [Erwinia amylovora ATCC
49946]
gi|291553502|emb|CBA20547.1| putative GTP-binding protein 9 [Erwinia amylovora CFBP1430]
gi|312172209|emb|CBX80466.1| putative GTP-binding protein 9 [Erwinia amylovora ATCC BAA-2158]
gi|426276575|gb|EKV54302.1| putative GTP-binding protein 9 [Erwinia amylovora ACW56400]
Length = 363
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ + + KK ++ + L++ + +L K+ +R
Sbjct: 121 PADDIDTINTELALSDLDTCERALQRVQKKAKGGDKDAKAEQAALEKCLPHLEKAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D++ F+ LG++E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDGDREEFMAELGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ ++GEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITFRGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|149378002|ref|ZP_01895727.1| predicted GTPase, probable translation factor [Marinobacter
algicola DG893]
gi|149357711|gb|EDM46208.1| predicted GTPase, probable translation factor [Marinobacter
algicola DG893]
Length = 363
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNAGVVAMPDPRLNKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ ++ VDIAGLV GASKGEGLGN+FLA+IR+T+ + HV+RCF+DD + H++ +I+
Sbjct: 61 EKVVATTMEFVDIAGLVEGASKGEGLGNQFLANIRQTDAIAHVVRCFEDDNVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL +EK I + + ++ + L++ ++ LN+ P+R
Sbjct: 121 PASDIEIINTELALADLETVEKAIKRVQRVAKSGDKEAKAQLEVFDTLLPVLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+ E++ I+ L LLT+KP +++ANV E+GF+NN LD +K A ++N ++ IC K+
Sbjct: 181 MNLDKEKMALIRELCLLTVKPTMYIANVSEDGFENNPHLDTVKKIAESENAVVVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FL+ +G+ E L+ +IR +SLLDL+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDDEKSMFLEEMGMDEPGLDRVIRGGYSLLDLQTYFTAGVKEVRAWTVRVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVVSYDDFVQYNGEAGAKDAGKWRLEGKEYIVQDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|406678096|ref|ZP_11085275.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AMC35]
gi|404623067|gb|EKB19921.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AMC35]
Length = 363
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVEVLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ LN LT+KP +++ANV E+GF+NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKEELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDKVREIADAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFINYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|88861337|ref|ZP_01135967.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
tunicata D2]
gi|88816603|gb|EAR26428.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
tunicata D2]
Length = 363
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT I A N+PFCTIEPN G++ VPD RLK L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTNAGIEAANFPFCTIEPNTGVVAVPDPRLKQLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G I+
Sbjct: 61 QRILPTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL+L+D+ +K + + KK ++ S L +L+++ +L++ + +R
Sbjct: 121 PADDIDTINTELVLADMEAADKAVFRIAKKAKGGDKDSKFELVVLEKVKAHLDQGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +IK +N LTIKP +++ANV E+GF+NN LD++ A +N ++ +CA +
Sbjct: 181 LELTKEEHAAIKTINFLTIKPTMYIANVSEDGFENNPYLDKVLEIAAAENAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L+ DK F+ +LGL+E L+ +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDEADKIEFMTDLGLEEPGLDRVIRGGYQLLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI + D++ KGE G K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIGFNDYITCKGESGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407892571|ref|ZP_11151601.1| GTP-binding protein YchF [Diplorickettsia massiliensis 20B]
Length = 363
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I+A NYPFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIAAANYPFCTIEPNVGVVPVPDPRLAELAQIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GA+KGEGLGN+FLAHIRE + + HV+RCF+D+ + H+SG++N
Sbjct: 61 QKIIPTSMEFVDIAGLVAGAAKGEGLGNQFLAHIREVDAIAHVVRCFEDEDVVHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL EK + + N+ + +++ LL +I LN+ +R
Sbjct: 121 PVADIQTIHTELALTDLETAEKALIRLNRNKKEVDPNALATKTLLSTLIPQLNEGALLRD 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++LN EE + + + LT+K ++++ANV E GF NN LL+ ++ +A N P++ +CAKL
Sbjct: 181 LNLNAEERLLLAPYHFLTLKEVLYIANVDERGFTNNPLLEAVETFAQQHNAPVVALCAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EE+ ++ ++ FL LGLKET L+ LI A ++LL+L+T+FT G KEIRAWTI G T
Sbjct: 241 EEDCLAFSDEERITFLQELGLKETGLHRLICAGYALLNLQTFFTAGVKEIRAWTIQKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IH+D ++GFIRA I Y DF+ Y+GEQG K AGK R EGK Y+V DGD+++FL
Sbjct: 301 APQAAGRIHSDFEKGFIRAEVIGYSDFIQYQGEQGAKEAGKWRLEGKLYVVTDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|418464191|ref|ZP_13035132.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359757371|gb|EHK91526.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 363
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLSEADMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|343519154|ref|ZP_08756139.1| GTP-binding protein YchF [Haemophilus pittmaniae HK 85]
gi|343392920|gb|EGV05480.1| GTP-binding protein YchF [Haemophilus pittmaniae HK 85]
Length = 363
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ YA + ++ +CA +
Sbjct: 181 VALDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREYAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|89094727|ref|ZP_01167662.1| GTP-binding protein [Neptuniibacter caesariensis]
gi|89080981|gb|EAR60218.1| GTP-binding protein [Oceanospirillum sp. MED92]
Length = 363
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN G + +PD RL +L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKNGIAAENFPFCTIEPNAGTVAMPDPRLDNLAAIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ +I+
Sbjct: 61 ERVVPTAMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I EL L+DL EK + + K ++ ++ +L+R+I L + P+R
Sbjct: 121 PLSDIETINLELALADLDSAEKQLQRIQKLAKGGDKEAVAQKAMLERLIPYLEEGKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M LN++E+ +K +LLT+KP +++ANV E+GF++N LDQ+K A ++N ++++C KL
Sbjct: 181 MGLNDDEMKIVKGFHLLTVKPTMYIANVDEDGFEDNPHLDQVKELAASENAGVVVVCNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L++ ++ FL +LG++E L+ +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISELDDEERDEFLADLGMEEPGLDRVIRAGYELLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +SY DF+ + GE G K+AG+ R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVSYDDFVEHNGENGAKDAGRWRLEGKDYIVQDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422014443|ref|ZP_16361054.1| GTP-binding protein YchF [Providencia burhodogranariea DSM 19968]
gi|414100887|gb|EKT62496.1| GTP-binding protein YchF [Providencia burhodogranariea DSM 19968]
Length = 363
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+DD I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEDDNIIHVAGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL E+ I + K+ ++ + L+ L++ + +L+++ +R
Sbjct: 121 PAEDIDVINTELALADLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPHLSEAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ E+ +I++L+ LT+KP +++ANV E+GF+NN LD + A + ++ +CA +
Sbjct: 181 LNLSIEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPFLDVVYKIAEAEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ +LG++E LN +IRA + LLDL+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEEREEFMADLGIEEPGLNRVIRAGYELLDLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQG K AG++R+EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFIKYRGEQGAKEAGRMRAEGKDYVVQDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416894504|ref|ZP_11925092.1| GTP-binding protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347813466|gb|EGY30139.1| GTP-binding protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 363
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ YKGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQYKGENGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332140911|ref|YP_004426649.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Deep
ecotype']
gi|410861168|ref|YP_006976402.1| GTP-binding protein YchF [Alteromonas macleodii AltDE1]
gi|327550933|gb|AEA97651.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818430|gb|AFV85047.1| GTP-binding protein YchF [Alteromonas macleodii AltDE1]
Length = 363
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G ++
Sbjct: 61 QRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL EK + + K+ + + +K+L++I +L++ + +R
Sbjct: 121 PKDDIDVINTELALSDLETTEKALHRVAKRAKGGDADAKYEMKVLEKIKPHLDEGLLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I ++N+LT+KP +++ANV E+GF+NN LDQ+K A +N ++ +CA +
Sbjct: 181 LELSKEELEAISYMNMLTLKPTMYIANVNEDGFENNPYLDQVKEIAAGENATVVAVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ ++GL+E LN +IR+ ++LL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELEDDEREEFMQDMGLEEPGLNRVIRSGYNLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA +SY F+ + GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVSYDHFVEFNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|357418245|ref|YP_004931265.1| GTP-binding protein YchF [Pseudoxanthomonas spadix BD-a59]
gi|355335823|gb|AER57224.1| GTP-binding protein YchF [Pseudoxanthomonas spadix BD-a59]
Length = 363
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RLK L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLKALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GA+ GEGLGNKFL+HIRE + + HV+RCF++D + H++ +++
Sbjct: 61 HRVVPTAVEFVDIAGLVAGAASGEGLGNKFLSHIREVDAIAHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L R+ LN IP R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERSAKGGDKEAAARKPVLARLQAALNDGIPARR 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ E+ ++ L LLT+KP++++ANV E+GF+NN LD ++ A + ++ + A +
Sbjct: 181 AGLDEEQRALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRARAEQEGARVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L++ D+ FL +LGL+E LN +I A++ LL L+TYFT G +E+RAWT+ G+T
Sbjct: 241 EEELAQLDDADRDAFLADLGLEEPGLNRVIYAAYQLLGLQTYFTAGVQEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA T+SY DF+ YKGE GCK AG++R EGK Y V++GDIL+F
Sbjct: 301 APKAAAVIHTDFEKGFIRAETMSYDDFIKYKGEAGCKEAGRLRLEGKDYKVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|113460648|ref|YP_718714.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus somnus
129PT]
gi|170718049|ref|YP_001785088.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus somnus
2336]
gi|112822691|gb|ABI24780.1| noncellulosomal endoglucanase [Haemophilus somnus 129PT]
gi|168826178|gb|ACA31549.1| GTP-binding protein YchF [Haemophilus somnus 2336]
Length = 363
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L +IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 LDLDKDELHAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFATKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKTDFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|392541026|ref|ZP_10288163.1| GTP-binding protein YchF [Pseudoalteromonas piscicida JCM 20779]
gi|409203093|ref|ZP_11231296.1| GTP-binding protein YchF [Pseudoalteromonas flavipulchra JG1]
Length = 363
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDARLDQLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+++ I H++G+I+
Sbjct: 61 QRTIPTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFENENIVHVAGQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ ++ + + KK ++ + L +L+++ +L++ + +R
Sbjct: 121 PAEDIDVINTELVLADMDTADRAVLRNAKKAKGGDKDAKFELVVLEKVKAHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ LN EE +I +LN LTIKP +++ANV E+GF+NN LD+++ A ++ +I +CA +
Sbjct: 181 LELNKEEAAAISYLNFLTIKPTMYIANVNEDGFENNPFLDKVREIAAAEDAVVIPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L DKK F+D+LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEDKKEFMDDLGLEEPGLNRVIRGGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI + D++ ++GE G K+AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIGFDDYIEFRGESGAKDAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|255020867|ref|ZP_05292923.1| GTP-binding and nucleic acid-binding protein YchF
[Acidithiobacillus caldus ATCC 51756]
gi|340781436|ref|YP_004748043.1| GTP-binding and nucleic acid-binding protein YchF
[Acidithiobacillus caldus SM-1]
gi|254969658|gb|EET27164.1| GTP-binding and nucleic acid-binding protein YchF
[Acidithiobacillus caldus ATCC 51756]
gi|340555589|gb|AEK57343.1| GTP-binding and nucleic acid-binding protein YchF
[Acidithiobacillus caldus SM-1]
Length = 363
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L CG++GLPNVGKSTLFNA+TK I+AENYPFCTIEPN+GI+EVPD RL+ L +IVK
Sbjct: 1 MSLACGIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRLQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ PA ++ VDIAGLV+GA++GEGLGN+FLAHIRET + V RCF DD + H+ G ++
Sbjct: 61 QKVVPATMEFVDIAGLVAGAAQGEGLGNQFLAHIRETAAIALVTRCFVDDNVVHVQGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +V+ TELIL+DL+ +EK + K+ + L LL+R++ +L+ P
Sbjct: 121 PVADLDVVLTELILADLSTVEKAQQRVQKQAKGGQAEARAELALLQRLLPHLDSGQPASS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SL EE + L LL+ KP++ +ANV E+ ++ L+ +A + ++ +CA +
Sbjct: 181 LSLTEEERQRLVPLCLLSAKPMLVIANVHEDELRDGPWRQPLEAWADARGARVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L +++ FL +LGL E LN +IR+++ LL L TYFT G+KE+RAWT P G T
Sbjct: 241 EAELAELPPAEQQEFLQDLGLAEPGLNRIIRSAYGLLGLETYFTAGEKEVRAWTYPKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA I+++DF+ Y+GE G + AGK+R EGK+Y V DGD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVIAFEDFVHYRGESGAREAGKMRLEGKEYRVRDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|52424610|ref|YP_087747.1| GTP-dependent nucleic acid-binding protein EngD [Mannheimia
succiniciproducens MBEL55E]
gi|52306662|gb|AAU37162.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H+SG+IN
Sbjct: 61 ERTLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVSGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++++ L + IR
Sbjct: 121 PADDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKLLPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VDLDKEELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I Y DF+ YKGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIGYDDFIQYKGEQGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|222086601|ref|YP_002545135.1| GTP-dependent nucleic acid-binding protein EngD [Agrobacterium
radiobacter K84]
gi|398378250|ref|ZP_10536416.1| GTP-binding protein YchF [Rhizobium sp. AP16]
gi|221724049|gb|ACM27205.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|397725463|gb|EJK85914.1| GTP-binding protein YchF [Rhizobium sp. AP16]
Length = 367
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/366 (53%), Positives = 258/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMEQLAQIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+LSDL LE+ ++ K+ K++ S+ +L L++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLSDLESLERRTEQTRKRATGKDKESMAMLPLMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L++EEL +K LNLLT P+++V NV E + N + A QN ++II
Sbjct: 181 TLLSKLDDEELRILKSLNLLTSHPVLYVCNVAEADAVAGNEHTAAVAAMAKEQNSEVVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + FL LGLKE L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPADEAMEFLSELGLKEAGLDQLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ +KGE G K GK+RSEGK+Y+V+DGD+
Sbjct: 301 EGTKAPQAAGVIHSDFERGFIRAQTIAYSDYIAFKGEVGAKENGKMRSEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
LNFLFN
Sbjct: 361 LNFLFN 366
>gi|444349958|ref|ZP_21157239.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443543582|gb|ELT53772.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 375
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 13 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 72
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 73 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 132
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 133 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 192
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 193 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 252
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 253 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 312
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 313 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 372
Query: 361 FNI 363
FN+
Sbjct: 373 FNV 375
>gi|430377361|ref|ZP_19431494.1| GTP-binding protein YchF [Moraxella macacae 0408225]
gi|429540498|gb|ELA08527.1| GTP-binding protein YchF [Moraxella macacae 0408225]
Length = 363
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKQLAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G +N
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + I +KK ++ + +L + +I L + P R+
Sbjct: 121 PLSDIETINTELALADLEAVNRAIVNVSKKAKGGDKDAKAMLDVFNKIEPFLAEGKPARM 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+++E IK L+T+KP++++ANV E+GF +N LD ++ +A+N N ++ +C ++
Sbjct: 181 ANLDDDEKKCIKSYGLITLKPVMYIANVAEDGFDDNPYLDAVRDFANNDNAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL+ +G+KE L+ +IRA + LL+++TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIAELDDEEKAEFLEGMGMKEAGLDRVIRAGYELLNMQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA I++ DF+ Y+GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVIAFDDFIAYQGEKGAATAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|291617187|ref|YP_003519929.1| EngD [Pantoea ananatis LMG 20103]
gi|378767542|ref|YP_005196010.1| GTP-dependent nucleic acid-binding protein EngD [Pantoea ananatis
LMG 5342]
gi|386015579|ref|YP_005933860.1| GTP-dependent nucleic acid-binding protein EngD EngD [Pantoea
ananatis AJ13355]
gi|386079677|ref|YP_005993202.1| GTP-dependent nucleic acid-binding protein EngD [Pantoea ananatis
PA13]
gi|291152217|gb|ADD76801.1| EngD [Pantoea ananatis LMG 20103]
gi|327393642|dbj|BAK11064.1| GTP-dependent nucleic acid-binding protein EngD EngD [Pantoea
ananatis AJ13355]
gi|354988858|gb|AER32982.1| GTP-dependent nucleic acid-binding protein EngD [Pantoea ananatis
PA13]
gi|365187023|emb|CCF09973.1| GTP-dependent nucleic acid-binding protein EngD [Pantoea ananatis
LMG 5342]
Length = 363
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL L+DL E+ + + KK ++ + L++ + +L + +R
Sbjct: 121 PADDIETINTELALADLDTCERALQRVQKKAKGGDKDAKAEQAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ ++++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAALRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA +SLL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMAELGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238755538|ref|ZP_04616876.1| GTP-dependent nucleic acid-binding protein engD [Yersinia ruckeri
ATCC 29473]
gi|238706218|gb|EEP98597.1| GTP-dependent nucleic acid-binding protein engD [Yersinia ruckeri
ATCC 29473]
Length = 363
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ I + KK ++ + L+ L++ + +L K+ +R
Sbjct: 121 PADDIETINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLEKAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTTEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+++ + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAEMEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|163752630|ref|ZP_02159805.1| hypothetical protein KT99_00446 [Shewanella benthica KT99]
gi|161327483|gb|EDP98694.1| hypothetical protein KT99_00446 [Shewanella benthica KT99]
Length = 363
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTNAGIEASNFPFCTIEPNTGVVPVPDARLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ I H++ +I+
Sbjct: 61 ERVMPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ ++ + + +L++++ LN+ +R
Sbjct: 121 PAEDIEVINTELALADLDSCERAIHRQAKRAKGGDQEAKFEVSVLEKMLTPLNEGTMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE+ ++ +LN LT+KP +++ANV ++GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 LDLSVEEIAAVAYLNFLTLKPTMYIANVADDGFENNPHLDTVREIAAKENAVVVAVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ ++ D++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELGEMEPEDREEFMADLGLEEPGLDRVIRAGYDLLALQTYFTAGVKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K AGK++ EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMSYDDFITYNGEAGAKEAGKLKVEGKSYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|294142160|ref|YP_003558138.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
violacea DSS12]
gi|293328629|dbj|BAJ03360.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
violacea DSS12]
Length = 363
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ I H++ +I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ ++ + + +L++++ LN+ +R
Sbjct: 121 PAEDIEVINTELALADLDSCERAIHRQAKRAKGGDQEAKFEVAVLEKMLAPLNEGTMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ +LN LT+KP +++ANV ++GF++N LD ++ A +N ++ +CA +
Sbjct: 181 LDLSVEEKAAVAYLNFLTLKPTMYIANVADDGFEDNPHLDTVREIAGKENAVVVAVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +++ D+ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELGEMDPEDRNEFMADLGLEEPGLDRVIRAGYDLLTLQTYFTAGVKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y DF+ YKGE G K AGK++ EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLKVEGKSYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|378579397|ref|ZP_09828064.1| putative GTP-binding protein [Pantoea stewartii subsp. stewartii
DC283]
gi|377817871|gb|EHU00960.1| putative GTP-binding protein [Pantoea stewartii subsp. stewartii
DC283]
Length = 363
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL L+DL E+ + + KK ++ + L++ + +L + +R
Sbjct: 121 PADDIETINTELALADLDTCERALQRVQKKAKGGDKDAKAEQAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ ++++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAALRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAKEGSVVVPVCASV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA ++LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMTELGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261868209|ref|YP_003256131.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365967999|ref|YP_004949561.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|415770851|ref|ZP_11485097.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416077249|ref|ZP_11585793.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|416081168|ref|ZP_11586367.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|416102663|ref|ZP_11588845.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444338474|ref|ZP_21152309.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444345864|ref|ZP_21153868.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261413541|gb|ACX82912.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004046|gb|EGY44577.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348008512|gb|EGY48778.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348011083|gb|EGY51070.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|348656632|gb|EGY74242.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|365746912|gb|AEW77817.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443542405|gb|ELT52742.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|443545032|gb|ELT54902.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 363
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254369283|ref|ZP_04985295.1| GTP-binding protein [Francisella tularensis subsp. holarctica
FSC022]
gi|157122233|gb|EDO66373.1| GTP-binding protein [Francisella tularensis subsp. holarctica
FSC022]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ ++ + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIEYCDRTVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV ENGF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNENGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|337755554|ref|YP_004648065.1| GTP-binding and nucleic acid-binding protein YchF [Francisella sp.
TX077308]
gi|336447159|gb|AEI36465.1| GTP-binding and nucleic acid-binding protein YchF [Francisella sp.
TX077308]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K I + K ++ ++ ++ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAIQRFAKMKKSGDKEALAKADFYTKLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K LLT KP++++ANV ++GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FELTDDEAKWLKQTPLLTNKPVLYIANVNDDGFENNPLLDKVIEYAQAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEPDEKLEFLADMGLTETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVISYDDYIQYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|315634933|ref|ZP_07890215.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
segnis ATCC 33393]
gi|315476485|gb|EFU67235.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter
segnis ATCC 33393]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLSDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLEKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFKGENGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|242239283|ref|YP_002987464.1| GTP-dependent nucleic acid-binding protein EngD [Dickeya dadantii
Ech703]
gi|242131340|gb|ACS85642.1| GTP-binding protein YchF [Dickeya dadantii Ech703]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDKLAEIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+++ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ + + KK ++ + L++ + L + +R
Sbjct: 121 PADDIDTINTELALADLDTCERALHRVQKKAKGGDKDAKIEQAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPFLDQVREIAAKEGSVVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEEREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|168830300|gb|ACA34397.1| YchF [uncultured bacterium pTW2]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++CG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIQCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ I+
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K + + + ++ + +++L R+ L+ P R
Sbjct: 121 PIADIETIDTELALADLESVDKALQRAERTAKTGDKDARARVEVLARVRAGLDAGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I+ L LLT+KP+++VANV E+GF +N LD ++ A + ++ + A +
Sbjct: 181 LGLSDEDRAAIRDLFLLTLKPVMYVANVLEDGFSDNPHLDAVRARALGEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L + D+ FL +LGL E LN +IRA++ LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLEDEDRDAFLADLGLDEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTVKGGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGESGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|134302017|ref|YP_001121986.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. tularensis WY96-3418]
gi|421751830|ref|ZP_16188867.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
AS_713]
gi|421753684|ref|ZP_16190673.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
831]
gi|421757410|ref|ZP_16194290.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
80700103]
gi|421759268|ref|ZP_16196101.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
70102010]
gi|424674588|ref|ZP_18111504.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
70001275]
gi|134049794|gb|ABO46865.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409086366|gb|EKM86485.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
831]
gi|409086557|gb|EKM86673.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
AS_713]
gi|409090994|gb|EKM90999.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
70102010]
gi|409092498|gb|EKM92469.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
80700103]
gi|417434632|gb|EKT89574.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
70001275]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ ++ + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDRTVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV ENGF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNENGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386288632|ref|ZP_10065772.1| GTP-binding protein YchF [gamma proteobacterium BDW918]
gi|385278187|gb|EIF42159.1| GTP-binding protein YchF [gamma proteobacterium BDW918]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT I A N+PFCTIEPN GI+ VPD+RL L+ IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTNAGIDAANFPFCTIEPNSGIVMVPDQRLHALSAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++ +I+
Sbjct: 61 ERVMPATMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDNDNIIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+D+ ++K + K + ++ + L L ++++ +LN+ P+R
Sbjct: 121 PAADIDIINTELALADMESIDKQLQKVVRVARSGDKEATVLKNLFEKLLAHLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E+ + L+LLTIKP +++ANV E+GF+NN LD ++ A ++ IC KL
Sbjct: 181 LKLDADEMQRTRTLHLLTIKPTMYIANVNEDGFENNPHLDVVRAIAAEDGAIVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E L+ +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKAEFLTDLGMEEPGLDRVIRAGYQLLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG+IHTD ++GFIRA I+Y D++ YKGEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGVIHTDFEKGFIRAEVIAYDDYIQYKGEQGSKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325578760|ref|ZP_08148807.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
parainfluenzae ATCC 33392]
gi|325159584|gb|EGC71716.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
parainfluenzae ATCC 33392]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLSDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VALDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAKKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385330445|ref|YP_005884396.1| translation-associated GTPase [Marinobacter adhaerens HP15]
gi|311693595|gb|ADP96468.1| translation-associated GTPase [Marinobacter adhaerens HP15]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNAGVVAMPDPRLNKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T+ + HV+RCF+D + H++ +++
Sbjct: 61 ERVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFEDGNVIHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK I + + ++ + L++ ++++ LN+ P+R
Sbjct: 121 PASDIEVINTELALADLETVEKAIKRVQRVAKSGDKEAKAQLEMFEKLLPVLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+ +++ I+ L LLT+KP +++ANV E+GF+NN LD ++ A ++N ++ IC K+
Sbjct: 181 MNLDKDQMALIRELCLLTVKPTMYIANVSEDGFENNPHLDTVRKIAESENAVVVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FL+ +G++E L+ +IR + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDDEKSMFLEEMGMEEPGLDRVIRGGYGLLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVVSYDDFVQYNGEAGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238792542|ref|ZP_04636175.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
intermedia ATCC 29909]
gi|238728177|gb|EEQ19698.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
intermedia ATCC 29909]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL LSDL E+ + + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PVDDIDTINTELALSDLETCERAMHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDADRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|270159181|ref|ZP_06187837.1| GTP-dependent nucleic acid-binding protein engD [Legionella
longbeachae D-4968]
gi|289165991|ref|YP_003456129.1| GTP-binding protein [Legionella longbeachae NSW150]
gi|269987520|gb|EEZ93775.1| GTP-dependent nucleic acid-binding protein engD [Legionella
longbeachae D-4968]
gi|288859164|emb|CBJ13093.1| putative GTP-binding protein [Legionella longbeachae NSW150]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL L+ IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDPRLDALSKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAG+V GASKGEGLGN+FLA+IRET+ + HV+RCF++ + H+ G ++
Sbjct: 61 QQVLPATMQFVDIAGIVKGASKGEGLGNQFLANIRETDAIAHVVRCFENTDVVHVEGHVH 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+D+ LEK + K K N+ ++ +K L++I +L++ P+R
Sbjct: 121 PLSDIEVINTELALADMETLEKALLKAGKNSRSGNKEALFEVKTLEKIKAHLDEGYPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE + L LLT KP++++ANV +NG++NN LL+Q++ A + I+ +CA
Sbjct: 181 LELTAEEEHISRRLFLLTAKPVLYIANVDDNGYENNPLLEQVRELALQEKASIVALCAAT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+ +L+ D++ F+++LGL E L+ +IRA + LL L+TYFT G KE+RAWTI G T
Sbjct: 241 EAELVELDEADRQEFMEDLGLSEPGLHRVIRAGYELLGLQTYFTAGVKEVRAWTISKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y F+ GEQG K AGK+R EGK+Y+V DGDI++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVIAYDAFIQCGGEQGAKEAGKLRLEGKEYIVCDGDIMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15602028|ref|NP_245100.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774768|ref|YP_005177011.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
multocida 36950]
gi|383310741|ref|YP_005363551.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834732|ref|YP_006240049.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. 3480]
gi|417852478|ref|ZP_12498045.1| GTP-binding protein YchF [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|417853843|ref|ZP_12499186.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|47605741|sp|Q9CP90.3|ENGD_PASMU RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|12720382|gb|AAK02247.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338216776|gb|EGP02762.1| GTP-binding protein YchF [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338218880|gb|EGP04606.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|356597316|gb|AET16042.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
multocida 36950]
gi|380872013|gb|AFF24380.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201435|gb|AFI46290.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. 3480]
Length = 363
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PAEDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 IDLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++A +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|162421246|ref|YP_001606886.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
Angola]
gi|162354061|gb|ABX88009.1| GTP-binding protein YchF [Yersinia pestis Angola]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIETINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGTLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+++ + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAEMEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|419802315|ref|ZP_14327508.1| GTP-binding protein YchF [Haemophilus parainfluenzae HK262]
gi|419844309|ref|ZP_14367601.1| GTP-binding protein YchF [Haemophilus parainfluenzae HK2019]
gi|385190807|gb|EIF38240.1| GTP-binding protein YchF [Haemophilus parainfluenzae HK262]
gi|386417572|gb|EIJ32049.1| GTP-binding protein YchF [Haemophilus parainfluenzae HK2019]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLSDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|157376599|ref|YP_001475199.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
sediminis HAW-EB3]
gi|157318973|gb|ABV38071.1| GTP-binding protein YchF [Shewanella sediminis HAW-EB3]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ +++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL E+ I ++ K+ ++ + + +L+++ L++ +R
Sbjct: 121 PVADIEVINTELALADLDSCERAIMRQAKRAKGGDQDAKFEVSVLEKMRPVLDEGHMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL+++ +LN LT+KP +++ANV E+GF++N LD ++ A +N ++ +CA +
Sbjct: 181 MDLSKEELLAVDYLNFLTLKPTMYIANVSEDGFEDNPHLDAVREIASQENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMDAEDREEFMADLGLEEPGLDRVIRAGYDLLTLQTYFTAGVKEVRAWTVPIGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y+DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYEDFITYKGESGAKEAGKLRVEGKTYVVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238763009|ref|ZP_04623976.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
kristensenii ATCC 33638]
gi|238698767|gb|EEP91517.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
kristensenii ATCC 33638]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PVDDIDTINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAGEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|118497596|ref|YP_898646.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
novicida U112]
gi|195536296|ref|ZP_03079303.1| GTP-binding protein YchF [Francisella novicida FTE]
gi|118423502|gb|ABK89892.1| GTP-binding protein [Francisella novicida U112]
gi|194372773|gb|EDX27484.1| GTP-binding protein YchF [Francisella tularensis subsp. novicida
FTE]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PNIGI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNIGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV E+GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNEDGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYVMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|425064927|ref|ZP_18468047.1| GTP-binding and nucleic acid-binding protein YchF [Pasteurella
multocida subsp. gallicida P1059]
gi|404384642|gb|EJZ81075.1| GTP-binding and nucleic acid-binding protein YchF [Pasteurella
multocida subsp. gallicida P1059]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PAEDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 IDLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++A +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254876902|ref|ZP_05249612.1| GTP-binding protein ychF [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842923|gb|EET21337.1| GTP-binding protein ychF [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 363
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A NYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIEAANYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ ++ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTKLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K LLT KP++++ANV E+GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FELTDDEAKWLKQTPLLTSKPVLYIANVTEDGFENNPLLDKVIEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEPDEKLEFLADMGLTETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVISYDDYIQYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|208779397|ref|ZP_03246743.1| GTP-binding protein YchF [Francisella novicida FTG]
gi|254372960|ref|ZP_04988449.1| GTP-binding protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374411|ref|ZP_04989893.1| GTP-binding protein YchF [Francisella novicida GA99-3548]
gi|151570687|gb|EDN36341.1| GTP-binding protein [Francisella novicida GA99-3549]
gi|151572131|gb|EDN37785.1| GTP-binding protein YchF [Francisella novicida GA99-3548]
gi|208745197|gb|EDZ91495.1| GTP-binding protein YchF [Francisella novicida FTG]
Length = 363
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV E+GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNEDGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYVMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254491255|ref|ZP_05104436.1| GTP-binding protein YchF [Methylophaga thiooxidans DMS010]
gi|224463768|gb|EEF80036.1| GTP-binding protein YchF [Methylophaga thiooxydans DMS010]
Length = 363
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A+NYPFCTIEPN+GI+ VPD R+ L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAQNYPFCTIEPNVGIVPVPDPRMDKLAAIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++G+++
Sbjct: 61 ERVMPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK I K + ++ + L+LL ++ +L+ P+R
Sbjct: 121 PLDDIEVINTELALADLESVEKAITKTTRDAKSGDKTAKARLELLTKMREHLDSGQPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ ++ I+ L+LLT KP +++ANV E+GF+NN LD +K A + ++ ICA +
Sbjct: 181 MGLDVDQTALIRDLHLLTTKPTMYIANVSEDGFENNAALDAVKKLAEQEGAIVVPICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL + +K FL LG +E LN +IR+ + LL L TYFT G KE+RAWT+ T
Sbjct: 241 ESEIADLEDDEKADFLAELGQEEPGLNRVIRSGYQLLGLHTYFTAGVKEVRAWTVKLEAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG+IHTD ++GFIRA +SY D++ + GEQG K+AGK R EGK+Y+++DGD+++F
Sbjct: 301 APEGAGVIHTDFQKGFIRAEVVSYDDYVQFNGEQGAKDAGKWRLEGKEYIIKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387772331|ref|ZP_10128279.1| GTP-binding protein YchF [Haemophilus parahaemolyticus HK385]
gi|386906588|gb|EIJ71314.1| GTP-binding protein YchF [Haemophilus parahaemolyticus HK385]
Length = 363
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VNLDKDELLAIKGYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAAKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKTEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387824250|ref|YP_005823721.1| GTP-binding and nucleic acid-binding protein YchF [Francisella cf.
novicida 3523]
gi|328675849|gb|AEB28524.1| GTP-binding and nucleic acid-binding protein YchF [Francisella cf.
novicida 3523]
Length = 363
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIVTTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV E+GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNEDGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYVMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|345429883|ref|YP_004823001.1| GTP-binding protein [Haemophilus parainfluenzae T3T1]
gi|301155944|emb|CBW15414.1| predicted GTP-binding protein [Haemophilus parainfluenzae T3T1]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLSDIETINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG+ E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIDEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|22126183|ref|NP_669606.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
KIM10+]
gi|45441662|ref|NP_993201.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
biovar Microtus str. 91001]
gi|51596324|ref|YP_070515.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
pseudotuberculosis IP 32953]
gi|108807389|ref|YP_651305.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
Antiqua]
gi|108811654|ref|YP_647421.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
Nepal516]
gi|145598404|ref|YP_001162480.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
Pestoides F]
gi|149366058|ref|ZP_01888093.1| predicted GTP-binding protein [Yersinia pestis CA88-4125]
gi|153947042|ref|YP_001401048.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
pseudotuberculosis IP 31758]
gi|165926448|ref|ZP_02222280.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938880|ref|ZP_02227434.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009241|ref|ZP_02230139.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210536|ref|ZP_02236571.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401497|ref|ZP_02306994.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420347|ref|ZP_02312100.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424401|ref|ZP_02316154.1| GTP-binding protein YchF [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024418|ref|YP_001720923.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
pseudotuberculosis YPIII]
gi|186895366|ref|YP_001872478.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
pseudotuberculosis PB1/+]
gi|218929121|ref|YP_002346996.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis
CO92]
gi|229894719|ref|ZP_04509899.1| predicted GTP-binding protein [Yersinia pestis Pestoides A]
gi|229897419|ref|ZP_04512575.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229898062|ref|ZP_04513213.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229901931|ref|ZP_04517052.1| predicted GTP-binding protein [Yersinia pestis Nepal516]
gi|270490886|ref|ZP_06207960.1| GTP-binding protein YchF [Yersinia pestis KIM D27]
gi|294503918|ref|YP_003567980.1| hypothetical protein YPZ3_1808 [Yersinia pestis Z176003]
gi|384122365|ref|YP_005504985.1| hypothetical protein YPD4_1774 [Yersinia pestis D106004]
gi|384126236|ref|YP_005508850.1| hypothetical protein YPD8_1774 [Yersinia pestis D182038]
gi|384140164|ref|YP_005522866.1| GTP-binding protein YchF [Yersinia pestis A1122]
gi|384414810|ref|YP_005624172.1| putative GTP-binding protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420546885|ref|ZP_15044828.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-01]
gi|420552202|ref|ZP_15049579.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-02]
gi|420557714|ref|ZP_15054429.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-03]
gi|420563224|ref|ZP_15059299.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-04]
gi|420568266|ref|ZP_15063877.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-05]
gi|420571510|ref|ZP_15066835.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-06]
gi|420579239|ref|ZP_15073825.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-07]
gi|420584580|ref|ZP_15078671.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-08]
gi|420589706|ref|ZP_15083282.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-09]
gi|420595102|ref|ZP_15088144.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-10]
gi|420600708|ref|ZP_15093137.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-11]
gi|420606191|ref|ZP_15098068.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-12]
gi|420611557|ref|ZP_15102903.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-13]
gi|420616932|ref|ZP_15107632.1| GTPase of unknown function family protein [Yersinia pestis PY-14]
gi|420622260|ref|ZP_15112372.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-15]
gi|420627356|ref|ZP_15116994.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-16]
gi|420632452|ref|ZP_15121588.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-19]
gi|420637662|ref|ZP_15126259.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-25]
gi|420643192|ref|ZP_15131278.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-29]
gi|420648409|ref|ZP_15136022.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-32]
gi|420654053|ref|ZP_15141095.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-34]
gi|420659531|ref|ZP_15146017.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-36]
gi|420664857|ref|ZP_15150785.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-42]
gi|420669734|ref|ZP_15155214.1| GTPase of unknown function family protein [Yersinia pestis PY-45]
gi|420675101|ref|ZP_15160096.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-46]
gi|420680691|ref|ZP_15165160.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-47]
gi|420685974|ref|ZP_15169878.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-48]
gi|420691165|ref|ZP_15174462.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-52]
gi|420696949|ref|ZP_15179528.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-53]
gi|420702516|ref|ZP_15184143.1| GTPase of unknown function family protein [Yersinia pestis PY-54]
gi|420708209|ref|ZP_15188937.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-55]
gi|420713631|ref|ZP_15193792.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-56]
gi|420724624|ref|ZP_15203342.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-59]
gi|420730227|ref|ZP_15208354.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-60]
gi|420735261|ref|ZP_15212912.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-61]
gi|420740737|ref|ZP_15217839.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-63]
gi|420746258|ref|ZP_15222600.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-64]
gi|420751874|ref|ZP_15227502.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-65]
gi|420754427|ref|ZP_15229805.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-66]
gi|420762909|ref|ZP_15236766.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-71]
gi|420768110|ref|ZP_15241454.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-72]
gi|420773158|ref|ZP_15245999.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-76]
gi|420778698|ref|ZP_15250909.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-88]
gi|420784271|ref|ZP_15255790.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-89]
gi|420789511|ref|ZP_15260452.1| GTPase of unknown function family protein [Yersinia pestis PY-90]
gi|420795012|ref|ZP_15265406.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-91]
gi|420800067|ref|ZP_15269945.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-92]
gi|420805457|ref|ZP_15274814.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-93]
gi|420810761|ref|ZP_15279599.1| GTPase of unknown function family protein [Yersinia pestis PY-94]
gi|420816315|ref|ZP_15284591.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-95]
gi|420821609|ref|ZP_15289368.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-96]
gi|420826708|ref|ZP_15293935.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-98]
gi|420832395|ref|ZP_15299071.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-99]
gi|420837278|ref|ZP_15303487.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-100]
gi|420842447|ref|ZP_15308171.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-101]
gi|420848094|ref|ZP_15313254.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-102]
gi|420853604|ref|ZP_15318015.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-103]
gi|420858956|ref|ZP_15322643.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-113]
gi|421763497|ref|ZP_16200292.1| GTP-binding protein YchF [Yersinia pestis INS]
gi|21959148|gb|AAM85857.1|AE013832_7 putative GTP-binding protein [Yersinia pestis KIM10+]
gi|45436524|gb|AAS62078.1| Predicted GTPase [Yersinia pestis biovar Microtus str. 91001]
gi|51589606|emb|CAH21236.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108775302|gb|ABG17821.1| hypothetical protein YPN_1491 [Yersinia pestis Nepal516]
gi|108779302|gb|ABG13360.1| hypothetical protein YPA_1393 [Yersinia pestis Antiqua]
gi|115347732|emb|CAL20647.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145210100|gb|ABP39507.1| hypothetical protein YPDSF_1109 [Yersinia pestis Pestoides F]
gi|149292471|gb|EDM42545.1| predicted GTP-binding protein [Yersinia pestis CA88-4125]
gi|152958537|gb|ABS45998.1| GTP-binding protein YchF [Yersinia pseudotuberculosis IP 31758]
gi|165913243|gb|EDR31866.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921669|gb|EDR38866.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991796|gb|EDR44097.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207716|gb|EDR52196.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962042|gb|EDR58063.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049193|gb|EDR60601.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056283|gb|EDR66052.1| GTP-binding protein YchF [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169750952|gb|ACA68470.1| GTP-binding protein YchF [Yersinia pseudotuberculosis YPIII]
gi|186698392|gb|ACC89021.1| GTP-binding protein YchF [Yersinia pseudotuberculosis PB1/+]
gi|229680827|gb|EEO76922.1| predicted GTP-binding protein [Yersinia pestis Nepal516]
gi|229689103|gb|EEO81168.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229693756|gb|EEO83805.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229702192|gb|EEO90211.1| predicted GTP-binding protein [Yersinia pestis Pestoides A]
gi|262361961|gb|ACY58682.1| hypothetical protein YPD4_1774 [Yersinia pestis D106004]
gi|262365900|gb|ACY62457.1| hypothetical protein YPD8_1774 [Yersinia pestis D182038]
gi|270339390|gb|EFA50167.1| GTP-binding protein YchF [Yersinia pestis KIM D27]
gi|294354377|gb|ADE64718.1| hypothetical protein YPZ3_1808 [Yersinia pestis Z176003]
gi|320015314|gb|ADV98885.1| putative GTP-binding protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342855293|gb|AEL73846.1| GTP-binding protein YchF [Yersinia pestis A1122]
gi|391426443|gb|EIQ88624.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-01]
gi|391428152|gb|EIQ90162.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-02]
gi|391429312|gb|EIQ91177.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-03]
gi|391441972|gb|EIR02411.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-04]
gi|391443644|gb|EIR03939.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-05]
gi|391452168|gb|EIR11600.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-06]
gi|391459076|gb|EIR17883.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-07]
gi|391460150|gb|EIR18877.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-08]
gi|391462372|gb|EIR20893.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-09]
gi|391475098|gb|EIR32327.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-10]
gi|391476896|gb|EIR33975.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-11]
gi|391477314|gb|EIR34350.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-12]
gi|391490937|gb|EIR46542.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-13]
gi|391492055|gb|EIR47558.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-15]
gi|391494260|gb|EIR49513.1| GTPase of unknown function family protein [Yersinia pestis PY-14]
gi|391506620|gb|EIR60524.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-16]
gi|391507434|gb|EIR61262.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-19]
gi|391511892|gb|EIR65259.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-25]
gi|391522303|gb|EIR74698.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-29]
gi|391524872|gb|EIR77050.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-34]
gi|391525965|gb|EIR78056.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-32]
gi|391537908|gb|EIR88754.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-36]
gi|391540554|gb|EIR91172.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-42]
gi|391542408|gb|EIR92866.1| GTPase of unknown function family protein [Yersinia pestis PY-45]
gi|391555731|gb|EIS04875.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-46]
gi|391556204|gb|EIS05302.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-47]
gi|391557519|gb|EIS06509.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-48]
gi|391571031|gb|EIS18436.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-52]
gi|391571620|gb|EIS18945.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-53]
gi|391579616|gb|EIS25716.1| GTPase of unknown function family protein [Yersinia pestis PY-54]
gi|391583965|gb|EIS29555.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-55]
gi|391587093|gb|EIS32308.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-56]
gi|391600411|gb|EIS43943.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-60]
gi|391602111|gb|EIS45446.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-59]
gi|391615006|gb|EIS56819.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-61]
gi|391615615|gb|EIS57361.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-63]
gi|391620700|gb|EIS61827.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-64]
gi|391627179|gb|EIS67418.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-65]
gi|391638400|gb|EIS77207.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-71]
gi|391640910|gb|EIS79399.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-72]
gi|391650437|gb|EIS87720.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-76]
gi|391650707|gb|EIS87963.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-66]
gi|391655043|gb|EIS91824.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-88]
gi|391659632|gb|EIS95895.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-89]
gi|391663506|gb|EIS99342.1| GTPase of unknown function family protein [Yersinia pestis PY-90]
gi|391670843|gb|EIT05843.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-91]
gi|391680887|gb|EIT14897.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-93]
gi|391682378|gb|EIT16263.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-92]
gi|391683011|gb|EIT16823.1| GTPase of unknown function family protein [Yersinia pestis PY-94]
gi|391694772|gb|EIT27401.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-95]
gi|391698223|gb|EIT30548.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-96]
gi|391699499|gb|EIT31686.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-98]
gi|391709414|gb|EIT40593.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-99]
gi|391715575|gb|EIT46101.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-100]
gi|391716284|gb|EIT46746.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-101]
gi|391726699|gb|EIT56014.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-102]
gi|391729960|gb|EIT58888.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-103]
gi|391735048|gb|EIT63244.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-113]
gi|411176398|gb|EKS46418.1| GTP-binding protein YchF [Yersinia pestis INS]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIETINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+++ + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAEMEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|260914452|ref|ZP_05920921.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
dagmatis ATCC 43325]
gi|260631553|gb|EEX49735.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella
dagmatis ATCC 43325]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PAEDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++A +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|358451354|ref|ZP_09161788.1| GTP-binding protein YchF [Marinobacter manganoxydans MnI7-9]
gi|357224587|gb|EHJ03118.1| GTP-binding protein YchF [Marinobacter manganoxydans MnI7-9]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNAGVVAMPDPRLNKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ ++ VDIAGLV GASKGEGLGN+FLA+IR+T+ + HV+RCF+DD + H++ +I+
Sbjct: 61 EKVVATTMEFVDIAGLVEGASKGEGLGNQFLANIRQTDAIAHVVRCFEDDNVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL +EK I + + ++ + L++ ++++ LN+ P+R
Sbjct: 121 PASDIEIINTELALADLETVEKAIKRVQRVAKSGDKEAKAQLEIFEKLLPVLNEGKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+ +++ I+ L LLT+KP +++ANV E+GF+NN LD ++ A ++N ++ IC K+
Sbjct: 181 MNLDKDQMALIRELCLLTVKPTMYIANVSEDGFQNNPHLDTVRQIAESENAALVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FL+ +G++E L+ +IR + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDDEKSMFLEEMGMEEPGLDRVIRGGYGLLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ Y GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVVSYDDFVQYNGEAGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238788562|ref|ZP_04632355.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
frederiksenii ATCC 33641]
gi|238723475|gb|EEQ15122.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
frederiksenii ATCC 33641]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL LSDL E+ + + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PVDDIDTINTELALSDLETCERAMHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|403058602|ref|YP_006646819.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402805928|gb|AFR03566.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFIAYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|187931854|ref|YP_001891839.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712763|gb|ACD31060.1| GTP-binding protein YchF [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ +PD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSIPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ ++ + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDRTVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV ENGF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNENGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|440231214|ref|YP_007345007.1| GTP-binding protein YchF [Serratia marcescens FGI94]
gi|440052919|gb|AGB82822.1| GTP-binding protein YchF [Serratia marcescens FGI94]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H+SG+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ + + KK ++ + L L++ + +L + +R
Sbjct: 121 PASDIDVINTELALSDLDTCERAMHRIQKKAKGGDKDAKAELAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEERDEFMAELGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|127513847|ref|YP_001095044.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella loihica
PV-4]
gi|126639142|gb|ABO24785.1| GTP-binding protein YchF [Shewanella loihica PV-4]
Length = 363
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDPRLEALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ I H++ +++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ ++ + + +L+++ L++ +R
Sbjct: 121 PASDIEVINTELALADLDSCERAILRQQKRAKGGDKDAKFEVSVLEKMRPVLDEGHMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MDLSKEELAAVNYLNFLTLKPTMYIANVAEDGFENNPHLDAVREIAAKENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D+ F+ +LGL+E L+ +IRA + LLDL TYFT G KE+RAWT+P G
Sbjct: 241 ESELAEMDPEDRDEFMADLGLEEPGLDRVIRAGYQLLDLHTYFTAGVKEVRAWTVPVGAC 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA +SY DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMSYDDFIAYKGEAGAKEAGKLRVEGKTYVVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|354597462|ref|ZP_09015479.1| GTP-binding protein YchF [Brenneria sp. EniD312]
gi|353675397|gb|EHD21430.1| GTP-binding protein YchF [Brenneria sp. EniD312]
Length = 363
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A ++ ++ +CA +
Sbjct: 181 LDLSEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAASEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLTEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TISY+DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISYEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417840735|ref|ZP_12486843.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M19501]
gi|341950546|gb|EGT77133.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M19501]
Length = 363
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA +SLL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386389141|ref|ZP_10073971.1| GTP-binding protein YchF [Haemophilus paraphrohaemolyticus HK411]
gi|385696158|gb|EIG26664.1| GTP-binding protein YchF [Haemophilus paraphrohaemolyticus HK411]
Length = 363
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VDLDKDELLAIKGYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAAKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +I A ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKTEFLQDLGIEEPGLNRVIHAGYALLNLQTYFTAGVKEVRAWTVSGGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|123442675|ref|YP_001006652.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420258229|ref|ZP_14760968.1| GTP-binding protein YchF [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122089636|emb|CAL12486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404514365|gb|EKA28161.1| GTP-binding protein YchF [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 363
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PVDDIDTINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421262876|ref|ZP_15713961.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401690289|gb|EJS85570.1| GTP-binding protein YchF [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 363
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PAEDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 IDLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++A +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261253604|ref|ZP_05946177.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417955847|ref|ZP_12598853.1| GTP-binding protein YchF [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260936995|gb|EEX92984.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342812134|gb|EGU47149.1| GTP-binding protein YchF [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 363
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF++N LD ++ YA +N ++ +CA +
Sbjct: 181 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVRDYAEKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ Y GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIQYNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|167627808|ref|YP_001678308.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597809|gb|ABZ87807.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 363
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A NYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIEAANYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ ++ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTKLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K LLT KP++++ANV ++GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FELTDDEAKWLKQTPLLTSKPVLYIANVNDDGFENNPLLDKVIEYAQAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEPDEKLEFLADMGLTETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ISY D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVISYDDYIQYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNL 363
>gi|389775871|ref|ZP_10193717.1| GTP-binding protein YchF [Rhodanobacter spathiphylli B39]
gi|388436934|gb|EIL93764.1| GTP-binding protein YchF [Rhodanobacter spathiphylli B39]
Length = 362
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 269/363 (74%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L+ IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALSGIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PIADIETIDTELALADLESVDKALNRAERAAKANDKEALARKPVLQKLSAGLNEGKSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV ++GF+NN LLD ++ A + ++ +CA +
Sbjct: 180 LGLDEEEKALVRDLFLLTLKPLMYIANVPDDGFENNPLLDAVRERAATEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L++ D+ FL ++GL E LN +IRA + LLDL+TYFT G KE+RAW + G++
Sbjct: 240 EEEMAQLDDADRDEFLKDMGLDEPGLNRVIRAGYKLLDLQTYFTAGVKEVRAWQLRRGSS 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D ++GFIRA TISY DF+ YKGE G AG++R EGK+Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHSDFEKGFIRAETISYDDFIQYKGEAGAAAAGRLRKEGKEYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|160872401|ref|ZP_02062533.1| GTP-binding protein YchF [Rickettsiella grylli]
gi|159121200|gb|EDP46538.1| GTP-binding protein YchF [Rickettsiella grylli]
Length = 363
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNALTK I+ NYPFCTIEPNIGI+ VPDKRL L IV+
Sbjct: 1 MGLKCGIVGLPNVGKSTLFNALTKAGIAVANYPFCTIEPNIGIVPVPDKRLHALAKIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV GA+ GEGLGN+FLAHIRE + ++HV+RCF++ +I H++ +N
Sbjct: 61 QKIIPTTLEFVDIAGLVHGAAHGEGLGNQFLAHIREVDAILHVVRCFENSEIIHVADHVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TEL L+DL EK + + K ++ + LL+R+I LN+ +
Sbjct: 121 PITDVQTIHTELALADLESAEKALLRLTKAIKANDKSAQRTKNLLERMIPELNQGRLLSQ 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE++ ++ + LT+K I+++ANV E GF NN LL QL+ Y + + ++ ICAKL
Sbjct: 181 LQLSPEEILLLRPYSFLTLKSILYIANVDETGFLNNPLLKQLETYGASFHAKVVPICAKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EE+ DLN+ +K+ FL GL ET L+ L+RAS+ LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEDCIDLNDEEKREFLHACGLTETGLDRLVRASYELLNLQTYFTQGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QA+ IHTD ++GFIRA ISY DF+ Y+GEQ K AGK R EGK Y + DGDI++FL
Sbjct: 301 APQASACIHTDFEKGFIRAEVISYDDFIRYQGEQAAKEAGKWRLEGKTYQIHDGDIIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416066312|ref|ZP_11581979.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348002908|gb|EGY43571.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 363
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRF 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELFAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTASVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|385792975|ref|YP_005825951.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678300|gb|AEE87429.1| GTP-binding and nucleic acid-binding protein YchF [Francisella cf.
novicida Fx1]
Length = 363
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDKAVQRFAKIKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV E+GF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNEDGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGIKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYVMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|220933715|ref|YP_002512614.1| GTP-dependent nucleic acid-binding protein EngD [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219995025|gb|ACL71627.1| GTP-binding protein YchF [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 363
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+G++ VPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTRAGIQAENYPFCTIDPNVGVVPVPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ + HV+RCF++D + H++G ++
Sbjct: 61 EKLIPTAMEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIAHVVRCFENDDVIHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK +++ + ++ ++ + +++ L + R
Sbjct: 121 PLSDIEVINTELALADLETVEKALNRLTRSAKSGDKEAVARKNVAEKVQAVLAEGKAARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE ++ +L+T KP +++ANV E+GF+NN LLD+++ YA ++ ++ +CA +
Sbjct: 181 ADLDDEERKLLREFHLITAKPAMYIANVNEDGFENNPLLDRVREYAAAEHAQVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L + +K FL +GL E LN +IRA++ LL L+T+FT G KE+RAWT+ G T
Sbjct: 241 EAEIAQLEDDEKTEFLAEMGLDEPGLNRVIRAAYELLGLQTFFTAGPKEVRAWTVKRGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA + Y+DF+ KGEQG K+AGK R EGK+Y++++GD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVVGYEDFIAGKGEQGAKDAGKWRLEGKEYVMKEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|253688507|ref|YP_003017697.1| GTP-binding protein YchF [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755085|gb|ACT13161.1| GTP-binding protein YchF [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 363
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|415754447|ref|ZP_11480663.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416035186|ref|ZP_11573470.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347997485|gb|EGY38476.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348656230|gb|EGY71627.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D17P-3]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK +I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKARIEAANYPFCTIEPNTGVVLMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELFAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTASVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|119775703|ref|YP_928443.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
amazonensis SB2B]
gi|119768203|gb|ABM00774.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDELAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF+++ I H++ ++
Sbjct: 61 ERVIPTSMEFVDIAGLVAGASKGEGLGNKFLANIRETEAIGHVVRCFENENIVHVANRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +E+ I ++ K+ ++ + + +L+++ L++ +R
Sbjct: 121 PAGDIEVINTELALADLDSVERAIVRQQKRAKGGDKEAKFEVDVLEKLRPVLDEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LNLLT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 LELSKEELAAVAYLNLLTLKPTMYIANVSEDGFENNPHLDAVRAIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ ++ F+ +LGL E L+ +IRA + LL+L+TYFT G KE+RAWT+ G +
Sbjct: 241 ESELAEMDIEERDEFMADLGLTEPGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVSVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA ISY+DF+ +KGEQG K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGKIHTDFERGFIRAQVISYEDFINFKGEQGAKEAGKMRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|56707799|ref|YP_169695.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670270|ref|YP_666827.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. tularensis FSC198]
gi|254370297|ref|ZP_04986302.1| GTP-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|379717048|ref|YP_005305384.1| GTP-binding and nucleic acid-binding protein YchF [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725652|ref|YP_005317838.1| GTP-binding and nucleic acid-binding protein YchF [Francisella
tularensis subsp. tularensis TI0902]
gi|385794438|ref|YP_005830844.1| translation-associated GTPase [Francisella tularensis subsp.
tularensis NE061598]
gi|421755307|ref|ZP_16192257.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
80700075]
gi|56604291|emb|CAG45312.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320603|emb|CAL08695.1| GTP-binding protein [Francisella tularensis subsp. tularensis
FSC198]
gi|151568540|gb|EDN34194.1| GTP-binding protein [Francisella tularensis subsp. tularensis
FSC033]
gi|282158973|gb|ADA78364.1| translation-associated GTPase [Francisella tularensis subsp.
tularensis NE061598]
gi|377827101|gb|AFB80349.1| GTP-binding and nucleic acid-binding protein YchF [Francisella
tularensis subsp. tularensis TI0902]
gi|377828725|gb|AFB78804.1| GTP-binding and nucleic acid-binding protein YchF [Francisella
tularensis subsp. tularensis TIGB03]
gi|409088642|gb|EKM88706.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis
80700075]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ ++ + + K ++ ++ R+ +L P R
Sbjct: 121 PIDDINTINMELILADIESCDRTVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV ENGF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNKDETKWLKQTPLLTSKPVLYIANVNENGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTASVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416055264|ref|ZP_11579374.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|444334735|ref|ZP_21150199.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|348003233|gb|EGY43881.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|443549974|gb|ELT58503.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERTIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELFAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTASVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|145632640|ref|ZP_01788374.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 3655]
gi|386265212|ref|YP_005828704.1| GTP-binding protein YchF [Haemophilus influenzae R2846]
gi|144986835|gb|EDJ93387.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 3655]
gi|309972448|gb|ADO95649.1| GTP-binding protein YchF [Haemophilus influenzae R2846]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRIREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416043815|ref|ZP_11574776.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347996807|gb|EGY37859.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELFAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTASVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|411008395|ref|ZP_11384724.1| GTP-binding protein YchF [Aeromonas aquariorum AAK1]
gi|423195694|ref|ZP_17182277.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas
hydrophila SSU]
gi|404633106|gb|EKB29671.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas
hydrophila SSU]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFEDENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I++++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAINRQSKRAKGGDKDAKLEVEVLEKIKVALEDGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +EL ++ LN LT+KP +++ANV E+GF+NN LDQ++ A +N ++++C +
Sbjct: 181 MKLDKDELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDQVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|148827595|ref|YP_001292348.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
influenzae PittGG]
gi|319898085|ref|YP_004136282.1| gtp-binding protein [Haemophilus influenzae F3031]
gi|148718837|gb|ABQ99964.1| translation-associated GTPase [Haemophilus influenzae PittGG]
gi|317433591|emb|CBY81975.1| GTP-binding protein [Haemophilus influenzae F3031]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|88800288|ref|ZP_01115855.1| predicted GTPase, probable translation factor [Reinekea blandensis
MED297]
gi|88777003|gb|EAR08211.1| predicted GTPase, probable translation factor [Reinekea sp. MED297]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALT+ I AEN+PFCTIEPN G++ VPD R + IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTQAGIDAENFPFCTIEPNTGVVPVPDPRQDKIAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF +D + H+S +++
Sbjct: 61 QKSIATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDNDNVIHVSNQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL ++K + K KK +++ + L LL++I L+ + P+R
Sbjct: 121 PASDIEVINTELALADLESVDKQLLKLQKKAKGQDKEAKRLADLLEKIKPALDDAKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++E +K NLLT KP +++ANV E+GF+NN LD+++ A +N ++ IC KL
Sbjct: 181 VDLTDDEKADLKQFNLLTTKPTLYIANVNEDGFENNPYLDKVRAIAAEENAEVVAICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L + +K FL +LG++E LN +IRA++ LL L+T+FT G KE+RAWT+ G T
Sbjct: 241 ESEIVELEDDEKAEFLADLGMEEPGLNRVIRAAYQLLGLQTFFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A AAG+IHTD ++GFIRA T++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APNAAGVIHTDFEKGFIRAETVAYDDFITYNGESGAKEAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|260779391|ref|ZP_05888283.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605555|gb|EEX31850.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
coralliilyticus ATCC BAA-450]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + NKK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNNKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELAKEELAAIGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIEFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|343502226|ref|ZP_08740084.1| GTP-binding protein YchF [Vibrio tubiashii ATCC 19109]
gi|418479577|ref|ZP_13048655.1| GTP-binding protein YchF [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342815203|gb|EGU50128.1| GTP-binding protein YchF [Vibrio tubiashii ATCC 19109]
gi|384572845|gb|EIF03353.1| GTP-binding protein YchF [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ YA +N ++ +CA +
Sbjct: 181 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREYAEKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|373486548|ref|ZP_09577221.1| GTP-binding protein YchF [Holophaga foetida DSM 6591]
gi|372011409|gb|EHP12004.1| GTP-binding protein YchF [Holophaga foetida DSM 6591]
Length = 366
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++CG++GLPNVGKSTLFNALT+ ++ NYPFCTIEPN G+++VPD+R+ L IV
Sbjct: 1 MAVQCGIVGLPNVGKSTLFNALTQAGAASANYPFCTIEPNTGVVDVPDQRMYALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PA + VDIAGLV GASKGEGLGN FLA+IRET+ ++ V+RCF+D ITH+ G ++
Sbjct: 61 QRTLPAAQEFVDIAGLVRGASKGEGLGNAFLANIRETDAIVQVLRCFEDGDITHVEGAVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +I TELIL D+ +EK +D+ K N+ S L+ +L+R+ LN+ + R
Sbjct: 121 PVRDLGIIDTELILKDMESVEKALDRHTKTARSGNKESQALVTVLERVNAALNEGLWART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L+ EE++ +K L+T+KP++ V N+ E N N L+ + P+I IC
Sbjct: 181 VDLSKEEVLQLKPFCLITMKPMLLVGNISEGDIPNPHGNPHYAALEKVGAERGCPVIAIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
+KLE EI +L+ ++ FL+ GL E LN LIRAS+SLL L+TYFT G KE+RAWTI
Sbjct: 241 SKLEAEIQELSPEERPMFLEEAGLSEPGLNRLIRASYSLLGLQTYFTAGVKEVRAWTIHI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ISY+DF+ +KGEQG K AG++RSEGK+Y+V+DGD++
Sbjct: 301 GDTAPQAAAVIHTDFEKGFIRAQVISYEDFIKFKGEQGAKEAGRMRSEGKEYVVQDGDVV 360
Query: 358 NFLFNI 363
+FLFN+
Sbjct: 361 HFLFNV 366
>gi|392548995|ref|ZP_10296132.1| GTP-binding protein YchF [Pseudoalteromonas rubra ATCC 29570]
Length = 363
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVAVPDPRLDQLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H+SG++N
Sbjct: 61 QKTIATTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIVHVSGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+LSD+ ++ + KK ++ + ++L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLSDMEAADRAAQRNAKKAKGGDKDAKFQNEVLEKVKAHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +IK LN LTIKP +++ANV E+GF+NN LD+++ A ++ +I +CA +
Sbjct: 181 LELTKEELAAIKPLNFLTIKPTMYIANVTEDGFENNPFLDKVREIAAAEDAVVIPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEEEDKLEFMADLGLEEPGLNLVIRGGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI + D++ Y+GE G K+AGK+R EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIGFSDYIEYQGESGAKDAGKMRQEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261821684|ref|YP_003259790.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
wasabiae WPP163]
gi|261605697|gb|ACX88183.1| GTP-binding protein YchF [Pectobacterium wasabiae WPP163]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENASMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++++ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDDDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|406941537|gb|EKD74003.1| hypothetical protein ACD_45C00115G0006 [uncultured bacterium]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 256/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFN LTK + A NYPFCTIEPN+G++ VPD RL L IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNCLTKAGVDAANYPFCTIEPNVGVVAVPDPRLDKLAAIVHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GA++GEGLGNKFLA IRET+ + HV+RCF++ + H++G+I+
Sbjct: 61 ERILPTTVEFVDIAGLVKGAAQGEGLGNKFLATIRETDAIAHVVRCFENTDVVHVAGKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL + + I + K+ ++ + L L +R +LN P+R
Sbjct: 121 PKDDIDVINTELALADLDTVARAILRVQKQAKSGDKSAQAELALFERAKEHLNIGQPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
MSL +E +K L LLT KP +++ANV ENGF++N L+Q++ A +N ++ +CA L
Sbjct: 181 MSLTADEKFRLKQLQLLTAKPTLYIANVAENGFRDNPYLEQVQQIAEAENASVVAVCAAL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ +K FL +L L E LN +I A + LLDL TYFT G+KE+RAWTIP G+T
Sbjct: 241 EADIAELDDAEKAVFLADLKLDEPGLNRVIHAGYKLLDLETYFTAGEKEVRAWTIPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IH+D +GFIRA ISY D++ Y GE G K AGK R EGK Y V+DGD++ F
Sbjct: 301 APEAAGVIHSDFTKGFIRAEVISYADYIKYNGEAGAKEAGKWRLEGKDYTVQDGDVIYFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238751553|ref|ZP_04613044.1| GTP-dependent nucleic acid-binding protein engD [Yersinia rohdei
ATCC 43380]
gi|238710271|gb|EEQ02498.1| GTP-dependent nucleic acid-binding protein engD [Yersinia rohdei
ATCC 43380]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL LSDL E+ + + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PVDDIDTINTELALSDLETCERAMHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVRAIAEAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332161443|ref|YP_004298020.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665673|gb|ADZ42317.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330863244|emb|CBX73370.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
enterocolitica W22703]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIDTINTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359298647|ref|ZP_09184486.1| GTP-binding protein YchF [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304480|ref|ZP_10823549.1| GTP-binding protein YchF [Haemophilus sputorum HK 2154]
gi|400377749|gb|EJP30619.1| GTP-binding protein YchF [Haemophilus sputorum HK 2154]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H+SG+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I + K+ ++ + L ++++I+ L IR
Sbjct: 121 PADDIEVINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPTLEAGGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD++ A +N ++ +CA +
Sbjct: 181 IDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVCEIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELEDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374314154|ref|YP_005060583.1| GTP-binding protein [Serratia symbiotica str. 'Cinara cedri']
gi|363988380|gb|AEW44571.1| GTP-binding protein [Serratia symbiotica str. 'Cinara cedri']
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG+IGLPNVGKSTLFN LTK I A+N+PFCTI+PN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIIGLPNVGKSTLFNVLTKAGIEAKNFPFCTIQPNTGVVTIPDPRLYELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ +DIAGLV GASKGEGLGN+FL +IR T + HV+RCFKDD I H+ +I+
Sbjct: 61 QRILPTTMEFIDIAGLVRGASKGEGLGNQFLTNIRNTEAIAHVVRCFKDDNIIHVHNKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TELILSDL E+ I++ K+ +++S +L LL++ + L +R
Sbjct: 121 PAMDIEVINTELILSDLNTCERAINRIKKQANYGDKNSKNILFLLEKCLSYLEDFGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++ I+ LN LT+KP++++AN+ EN NN+ LD + A N ++ +CA +
Sbjct: 181 LDLGLADIAKIRCLNFLTLKPMMYIANISENSPNNNIYLDIIHKIAINDRSIVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+ L + +++ F+ L LKE LN +IRA ++LLDL+TYFT G KE+RAWTIP GTT
Sbjct: 241 ESDIAQLGDEERREFMAELNLKEPGLNRVIRAGYTLLDLQTYFTAGVKEVRAWTIPVGTT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA IHTD K+GFIRA TI+YKDF+ Y GEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAASKIHTDFKKGFIRAQTIAYKDFITYNGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FNI
Sbjct: 361 FNI 363
>gi|343494112|ref|ZP_08732385.1| GTP-binding protein YchF [Vibrio nigripulchritudo ATCC 27043]
gi|342825440|gb|EGU59928.1| GTP-binding protein YchF [Vibrio nigripulchritudo ATCC 27043]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELAKEELAAIGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAEKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y D++ Y GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDYIQYNGESGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238783260|ref|ZP_04627285.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
bercovieri ATCC 43970]
gi|238715853|gb|EEQ07840.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
bercovieri ATCC 43970]
Length = 363
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL LSDL E+ + + K+ ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIDTINTELALSDLEACERAMHRVQKRAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L +E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDADRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYRGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374263607|ref|ZP_09622155.1| translation-associated GTPase [Legionella drancourtii LLAP12]
gi|363536197|gb|EHL29643.1| translation-associated GTPase [Legionella drancourtii LLAP12]
Length = 354
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 260/354 (73%)
Query: 10 LPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKKIFPAIIK 69
+PNVGKSTLFNALTK I A NYPFCTIEPN+GI+ VPD RL L+ IVK ++ PA ++
Sbjct: 1 MPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDLRLDALSAIVKPQQALPATMQ 60
Query: 70 LVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPIHDAEVIQ 129
VDIAG+V GASKGEGLGN+FLA+IRET+ + HV+RCF++ + H+ G++NP+ D EVI
Sbjct: 61 FVDIAGIVKGASKGEGLGNQFLANIRETDAIAHVVRCFENTDVIHVEGQVNPLSDIEVIN 120
Query: 130 TELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMSLNNEELM 189
TEL L+D+ ++K + K K N+ +I +K L++I +L++ +P+R + LN +E +
Sbjct: 121 TELALADMETVDKALLKSGKNSRSGNKEAIAEVKTLEKIKAHLDEGLPVRTLDLNADEEL 180
Query: 190 SIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEEEISDLNN 249
+ L LLT KP++++ANV +NG++NN LLD ++ A +N I+ +CA E E+ +L +
Sbjct: 181 LARRLFLLTAKPVLYIANVDDNGYENNPLLDAVQTLAQQENASIVALCAATEAELVELED 240
Query: 250 IDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAEQAAGIIH 309
D+K F+D+LGL E L+ +IRA + LL L+TYFT G KE+RAWTI G TA QAAG+IH
Sbjct: 241 EDRKEFMDDLGLSEPGLHRVIRAGYDLLGLQTYFTAGVKEVRAWTIHKGATAPQAAGVIH 300
Query: 310 TDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFNI 363
TD ++GFIRA I+Y+ F+ GEQG K AGK+R EGK+Y+V DGD+++F FN+
Sbjct: 301 TDFEKGFIRAEVIAYEAFIACGGEQGAKEAGKLRLEGKEYIVCDGDVMHFRFNV 354
>gi|145638696|ref|ZP_01794305.1| GTP-binding protein [Haemophilus influenzae PittII]
gi|145272291|gb|EDK12199.1| GTP-binding protein [Haemophilus influenzae PittII]
gi|309750189|gb|ADO80173.1| GTP-binding protein YchF [Haemophilus influenzae R2866]
Length = 363
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVRKIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA +SLL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421079470|ref|ZP_15540408.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
wasabiae CFBP 3304]
gi|385871962|gb|AFI90482.1| GTP-binding protein EngD [Pectobacterium sp. SCC3193]
gi|401705556|gb|EJS95741.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
wasabiae CFBP 3304]
Length = 363
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++++ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDDDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|352086257|ref|ZP_08953798.1| GTP-binding protein YchF [Rhodanobacter sp. 2APBS1]
gi|351679556|gb|EHA62693.1| GTP-binding protein YchF [Rhodanobacter sp. 2APBS1]
Length = 362
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L+ IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALSEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PIADIETIDTELALADLESVDKALNRAERAAKANDKEALARKPVLQKLAAALNEGRSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV ++GF++N LLD ++ A ++ ++ +CA +
Sbjct: 180 AGLDEEEKALVRDLFLLTLKPLMYIANVADDGFEHNPLLDAVRERAVSEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L+ D+ FL ++GL E LN +IRA + LLDL+TYFT G KE+RAW + G T
Sbjct: 240 EEELAQLDEADRDEFLKDMGLDEPGLNRVIRAGYKLLDLQTYFTAGVKEVRAWQVKRGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA T+ Y DF+ YKGE G AG++R EGK+Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHTDFERGFIRAETVGYDDFIQYKGEAGAAAAGRLRKEGKEYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|161831564|ref|YP_001597666.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii
RSA 331]
gi|161763431|gb|ABX79073.1| GTP-binding protein YchF [Coxiella burnetii RSA 331]
Length = 363
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 258/359 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+G++ VPDKRL+ + IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P + VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ +TH++G IN
Sbjct: 61 KQIIPTTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EV+ TEL L+DL L+K + K K ++ + + LL++ L++ PIR
Sbjct: 121 PIADIEVVNTELALADLETLDKILVKLAKDVKRGDKKARDTYALLEKFKKLLDEGTPIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE + ++ LLT KP+++VANV E+GF +N L Q+ +A + ++ +CA +
Sbjct: 181 VNLTEEEEILLRPYQLLTSKPVLYVANVAEDGFTDNSYLSQIYEFAAKEKAKVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ D++ FL +LGL+E L+ +I+A + LL L T+FT G KE+RAWT P +T
Sbjct: 241 ESEIADLSASDQQDFLQSLGLEEPGLHRVIQAGYQLLGLITFFTAGPKELRAWTCPKNST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++ FIRA ISY D+ + GEQG K+AGK R EGK+YLV+DGDI+ F
Sbjct: 301 APQAAGVIHTDFEKRFIRAEVISYNDYTQFGGEQGAKDAGKWRLEGKEYLVQDGDIMYF 359
>gi|83644560|ref|YP_432995.1| GTP-dependent nucleic acid-binding protein EngD [Hahella chejuensis
KCTC 2396]
gi|83632603|gb|ABC28570.1| predicted GTPase, probable translation factor [Hahella chejuensis
KCTC 2396]
Length = 363
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ I AEN+PFCTIEPN GI+ +PD RL+ L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTQAGIDAENFPFCTIEPNSGIVAMPDPRLQKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T+ + HV+RCF D+ + H++ +++
Sbjct: 61 QKVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFADENVVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL +EK I + ++ ++ + + ++++++++ +LN++ P+R
Sbjct: 121 PAADIDVINTELALADLDTVEKGIKRISRIAKGGDKFAKQQIEVMEKLLPHLNEAKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EE++ I+ L LLT+KP +++ANV E+GF+NN LD ++ A + ++ IC KL
Sbjct: 181 LNLSAEEMLVIRELCLLTVKPTMYIANVAEDGFENNPHLDVVRAIAEKEGAVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +LG++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELEDEEKAEFLADLGMEEPGLDRVIRAGYKLLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA + Y DF + GEQG K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVVGYDDFTSFNGEQGAKEAGKWRLEGKDYIVQDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|145640349|ref|ZP_01795933.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
gi|145274935|gb|EDK14797.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.4-21]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|167625130|ref|YP_001675424.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
halifaxensis HAW-EB4]
gi|167355152|gb|ABZ77765.1| GTP-binding protein YchF [Shewanella halifaxensis HAW-EB4]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDSRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ ++N
Sbjct: 61 ERVLATTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ + + + +L+++ L++ +R
Sbjct: 121 PASDIEVINTELALADLDSCERAITRQAKRAKGGDSEAKFEVAVLEKMRPLLDEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L EEL +I +LN LT+KP +++ANV E+GF+NN LD +K A +N ++ +CA +
Sbjct: 181 MELTKEELAAIGYLNFLTLKPTMYIANVAEDGFENNPHLDTVKAIAAEENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D+ F+ +LGL+E L+ +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESELAEMDAEDRDEFMADLGLEEPGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVRIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y DF+ YKGE G K AGK+R EGK Y V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLRVEGKTYTVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|170728021|ref|YP_001762047.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella woodyi
ATCC 51908]
gi|169813368|gb|ACA87952.1| GTP-binding protein YchF [Shewanella woodyi ATCC 51908]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAQIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ +++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ + + + +L+++ L++ +R
Sbjct: 121 PASDIEVINTELALADLDSCERAITRQAKRAKGGDADAKFEVSVLEKMRPVLDEGDMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MELSKEELAAVAYLNFLTLKPTMYIANVAEDGFENNPHLDTVREIAAKENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMDAEDREEFMADLGLEEPGLDRVIRAGYDLLTLQTYFTAGVKEVRAWTVPVGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA ++Y DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APKAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|153206137|ref|ZP_01945400.1| GTP-binding protein YchF [Coxiella burnetii 'MSU Goat Q177']
gi|165918216|ref|ZP_02218302.1| GTP-binding protein YchF [Coxiella burnetii Q321]
gi|120577267|gb|EAX33891.1| GTP-binding protein YchF [Coxiella burnetii 'MSU Goat Q177']
gi|165918076|gb|EDR36680.1| GTP-binding protein YchF [Coxiella burnetii Q321]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 258/359 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+G++ VPDKRL+ + IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P + VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ +TH++G IN
Sbjct: 61 KQIIPTTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EV+ TEL L+DL L+K + K K ++ + + LL++ L++ PIR
Sbjct: 121 PIADIEVVNTELALADLETLDKILVKLAKDVKRGDKKARDTYALLEKFKKLLDEGTPIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE + ++ LLT KP+++VANV E+GF +N L Q+ +A + ++ +CA +
Sbjct: 181 VNLTEEEEILLRPYQLLTSKPVLYVANVAEDGFTDNSYLSQVYEFAAKEKAKVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ D++ FL +LGL+E L+ +I+A + LL L T+FT G KE+RAWT P +T
Sbjct: 241 ESEIADLSASDQQDFLQSLGLEEPGLHRVIQAGYELLGLITFFTAGPKELRAWTCPKNST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++ FIRA ISY D+ + GEQG K+AGK R EGK+YLV+DGDI+ F
Sbjct: 301 APQAAGVIHTDFEKRFIRAEVISYNDYTQFGGEQGAKDAGKWRLEGKEYLVQDGDIMYF 359
>gi|215919269|ref|NP_820821.2| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii
RSA 493]
gi|206584153|gb|AAO91335.2| GTP-binding protein, probable translation factor [Coxiella burnetii
RSA 493]
Length = 367
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 258/359 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+G++ VPDKRL+ + IV
Sbjct: 5 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P + VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ +TH++G IN
Sbjct: 65 KQIIPTTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSIN 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EV+ TEL L+DL L+K + K K ++ + + LL++ L++ PIR
Sbjct: 125 PIADIEVVNTELALADLETLDKILVKLAKDVKRGDKKARDTYALLEKFKKLLDEGTPIRS 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE + ++ LLT KP+++VANV E+GF +N L Q+ +A + ++ +CA +
Sbjct: 185 VNLTEEEEILLRPYQLLTSKPVLYVANVAEDGFTDNSYLSQVYEFAAKEKAKVVPVCAAI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ D++ FL +LGL+E L+ +I+A + LL L T+FT G KE+RAWT P +T
Sbjct: 245 ESEIADLSASDQQDFLQSLGLEEPGLHRVIQAGYQLLGLITFFTAGPKELRAWTCPKNST 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++ FIRA ISY D+ + GEQG K+AGK R EGK+YLV+DGDI+ F
Sbjct: 305 APQAAGVIHTDFEKRFIRAEVISYNDYTQFGGEQGAKDAGKWRLEGKEYLVQDGDIMYF 363
>gi|209363662|ref|YP_001423506.2| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii
Dugway 5J108-111]
gi|212211870|ref|YP_002302806.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii
CbuG_Q212]
gi|212217815|ref|YP_002304602.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii
CbuK_Q154]
gi|207081595|gb|ABS77671.2| GTP-binding protein, probable translation factor [Coxiella burnetii
Dugway 5J108-111]
gi|212010280|gb|ACJ17661.1| GTP-binding protein, probable translation factor [Coxiella burnetii
CbuG_Q212]
gi|212012077|gb|ACJ19457.1| GTP-binding protein, probable translation factor [Coxiella burnetii
CbuK_Q154]
Length = 367
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 258/359 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN+G++ VPDKRL+ + IV
Sbjct: 5 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P + VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ +TH++G IN
Sbjct: 65 KQIIPTTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSIN 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EV+ TEL L+DL L+K + K K ++ + + LL++ L++ PIR
Sbjct: 125 PIADIEVVNTELALADLETLDKILVKLAKDVKRGDKKARDTYALLEKFKKLLDEGTPIRS 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE + ++ LLT KP+++VANV E+GF +N L Q+ +A + ++ +CA +
Sbjct: 185 VNLTEEEEILLRPYQLLTSKPVLYVANVAEDGFTDNSYLSQVYEFAAKEKAKVVPVCAAI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+DL+ D++ FL +LGL+E L+ +I+A + LL L T+FT G KE+RAWT P +T
Sbjct: 245 ESEIADLSASDQQDFLQSLGLEEPGLHRVIQAGYELLGLITFFTAGPKELRAWTCPKNST 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++ FIRA ISY D+ + GEQG K+AGK R EGK+YLV+DGDI+ F
Sbjct: 305 APQAAGVIHTDFEKRFIRAEVISYNDYTQFGGEQGAKDAGKWRLEGKEYLVQDGDIMYF 363
>gi|145636339|ref|ZP_01792008.1| GTP-binding protein [Haemophilus influenzae PittHH]
gi|145270504|gb|EDK10438.1| GTP-binding protein [Haemophilus influenzae PittHH]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|410624787|ref|ZP_11335577.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
mesophila KMM 241]
gi|410155633|dbj|GAC22346.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
mesophila KMM 241]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++G+IN
Sbjct: 61 KRILPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL EK + + K+ + + LK+L++I +L++ +R
Sbjct: 121 PQDDIDIINTELALADLETTEKALLRVAKRAKGGDADAKFELKVLEKIKPHLDEGELLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N LT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA++
Sbjct: 181 VELEKEELKAIGYMNFLTLKPTMYIANVNEDGFENNPYLDKVRSIAEGENAVVVAVCAEM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L + ++ F+ +GL+E LN +IR+ +SLL+L TYFT G +E+RAWT P G+T
Sbjct: 241 EAEIGELEDDERAEFMAEMGLEEPGLNRVIRSGYSLLNLNTYFTAGVQEVRAWTFPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AGIIHTD ++GFIRA I Y +F+ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQTAGIIHTDFEKGFIRAEVIGYDNFVEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|389807564|ref|ZP_10204153.1| GTP-binding protein YchF [Rhodanobacter thiooxydans LCS2]
gi|388443888|gb|EIM00020.1| GTP-binding protein YchF [Rhodanobacter thiooxydans LCS2]
Length = 362
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 265/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L+ IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALSEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PIADIETIDTELALADLESVDKALNRAERAAKANDKEALARKPVLQKLAAALNEGRSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV ++GF++N LLD ++ A ++ ++ +CA +
Sbjct: 180 AGLDEEEKALVRDLFLLTLKPLMYIANVADDGFEHNPLLDAVRERAVSEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L+ D+ FL ++GL E LN +IRA + LLDL+TYFT G KE+RAW + G T
Sbjct: 240 EEELAQLDEADRDEFLKDMGLDEPGLNRVIRAGYKLLDLQTYFTAGVKEVRAWQVKRGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA T+ Y DF+ YKGE G AG++R EGK Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHTDFERGFIRAETVGYDDFIQYKGEAGAAAAGRLRKEGKDYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|410619671|ref|ZP_11330565.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola polaris
LMG 21857]
gi|410160803|dbj|GAC34703.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola polaris
LMG 21857]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++G+IN
Sbjct: 61 KRILPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL EK + + K+ + + LK+L++I +L++ I +R
Sbjct: 121 PQDDIDIINTELALADLETTEKALLRVAKRAKGGDSDAKFELKVLEKIKPHLDEGILLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE+ +I ++N LT+KP +++ANV E+GF+NN LD+++ A ++ ++ +CA++
Sbjct: 181 VELEKEEVKAISYMNFLTLKPTMYIANVNEDGFENNPYLDKVRAIAEGEDAVVVAVCAEM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L + ++ F+ +GL+E LN +IR+ + LL+L TYFT G +E+RAWT P G+T
Sbjct: 241 EAEIGELEDDERAEFMAEMGLEEPGLNRVIRSGYDLLNLNTYFTAGVQEVRAWTFPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AGIIHTD ++GFIRA I Y++F+ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQTAGIIHTDFEKGFIRAEVIGYENFVEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|323492383|ref|ZP_08097536.1| GTP-binding protein YchF [Vibrio brasiliensis LMG 20546]
gi|323313430|gb|EGA66541.1| GTP-binding protein YchF [Vibrio brasiliensis LMG 20546]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF++N LD ++ YA +N ++ +CA +
Sbjct: 181 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVREYAEKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|238797822|ref|ZP_04641315.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
mollaretii ATCC 43969]
gi|238718350|gb|EEQ10173.1| GTP-dependent nucleic acid-binding protein engD [Yersinia
mollaretii ATCC 43969]
Length = 364
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D + I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIDTINTELALSDLEACERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L SL E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA
Sbjct: 181 LKSLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELEDADRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|109898886|ref|YP_662141.1| GTP-dependent nucleic acid-binding protein EngD [Pseudoalteromonas
atlantica T6c]
gi|109701167|gb|ABG41087.1| GTP-binding protein YchF [Pseudoalteromonas atlantica T6c]
Length = 363
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++G+IN
Sbjct: 61 KRILPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL EK + + K+ + + LK+L++I +L++ +R
Sbjct: 121 PQDDIDIINTELALADLETTEKALLRVAKRAKGGDGDAKFELKVLEKIKPHLDEGELLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N LT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA++
Sbjct: 181 VELEKEELKAISYMNFLTLKPTMYIANVNEDGFENNPYLDKVRSIAEGENAVVVAVCAEM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L + ++ F+ +GL+E LN +IR+ +SLL+L TYFT G +E+RAWT P G+T
Sbjct: 241 EAEIGELEDDERAEFMAEMGLEEPGLNRVIRSGYSLLNLNTYFTAGVQEVRAWTFPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AGIIHTD ++GFIRA I Y +F+ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQTAGIIHTDFEKGFIRAEVIGYDNFVEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|89256304|ref|YP_513666.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica LVS]
gi|115314751|ref|YP_763474.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica OSU18]
gi|156502373|ref|YP_001428438.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367637|ref|ZP_04983658.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|290953138|ref|ZP_06557759.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica URFT1]
gi|422938708|ref|YP_007011855.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica FSC200]
gi|423050651|ref|YP_007009085.1| GTP-binding protein YchF [Francisella tularensis subsp. holarctica
F92]
gi|89144135|emb|CAJ79394.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS]
gi|115129650|gb|ABI82837.1| GTP-binding protein [Francisella tularensis subsp. holarctica
OSU18]
gi|134253448|gb|EBA52542.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|156252976|gb|ABU61482.1| GTP-binding protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407293859|gb|AFT92765.1| GTP-dependent nucleic acid-binding protein EngD [Francisella
tularensis subsp. holarctica FSC200]
gi|421951373|gb|AFX70622.1| GTP-binding protein YchF [Francisella tularensis subsp. holarctica
F92]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERIITTTMEFVDIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D +I ELIL+D+ ++ + + K ++ ++ R+ +L R
Sbjct: 121 PIDDINIINMELILADIEYCDRTVQRFAKMKKSGDKEALAKADFYTRLKEHLESEKHART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+N +E +K LLT KP++++ANV ENGF+NN LLD++ YA +N ++ +CA +
Sbjct: 181 FEMNEDETKWLKQTPLLTSKPVLYIANVNENGFENNPLLDKVVEYAKAENSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEADEKLEFLADMGLSETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDYIKYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|16272342|ref|NP_438555.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
influenzae Rd KW20]
gi|260580544|ref|ZP_05848372.1| translation-associated GTPase [Haemophilus influenzae RdAW]
gi|1175666|sp|P44681.2|ENGD_HAEIN RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|29726337|pdb|1JAL|A Chain A, Ychf Protein (Hi0393)
gi|29726338|pdb|1JAL|B Chain B, Ychf Protein (Hi0393)
gi|1573365|gb|AAC22052.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae
Rd KW20]
gi|260092886|gb|EEW76821.1| translation-associated GTPase [Haemophilus influenzae RdAW]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|157370224|ref|YP_001478213.1| GTP-dependent nucleic acid-binding protein EngD [Serratia
proteamaculans 568]
gi|157321988|gb|ABV41085.1| GTP-binding protein YchF [Serratia proteamaculans 568]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+G++NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|68248996|ref|YP_248108.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
influenzae 86-028NP]
gi|145628756|ref|ZP_01784556.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.1-21]
gi|148825326|ref|YP_001290079.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
influenzae PittEE]
gi|329122268|ref|ZP_08250856.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
aegyptius ATCC 11116]
gi|68057195|gb|AAX87448.1| predicted GTPase, probable translation factor [Haemophilus
influenzae 86-028NP]
gi|144979226|gb|EDJ88912.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.1-21]
gi|148715486|gb|ABQ97696.1| predicted GTPase, probable translation factor [Haemophilus
influenzae PittEE]
gi|327473829|gb|EGF19246.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
aegyptius ATCC 11116]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|117619645|ref|YP_857656.1| GTP-binding protein YchF [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561052|gb|ABK38000.1| GTP-binding protein YchF [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I++++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAINRQSKRAKGGDKDAKLEVEVLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +EL ++ LN LT+KP +++ANV E+GF+NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKDELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRTEFMADLGIEEPGLNRVIRSGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK+Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKEYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|331005802|ref|ZP_08329160.1| GTP-binding and nucleic acid-binding protein YchF [gamma
proteobacterium IMCC1989]
gi|330420383|gb|EGG94691.1| GTP-binding and nucleic acid-binding protein YchF [gamma
proteobacterium IMCC1989]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD RL L+ IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAVPDLRLDKLSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D+ + H+ G+IN
Sbjct: 61 QKTIATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDENVVHVEGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL +EK I + K ++++++ + LL++I+ +LN++ P+R
Sbjct: 121 PASDIDVINTELALADLDSVEKAIQRFAKAAKGQDKNAMAMKALLEKILPHLNEAKPLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K L+ LT+KP +++ANV E GF+NN LD +K A ++N +++IC KL
Sbjct: 181 FPLTDDEKALLKSLSFLTLKPTMYIANVDEEGFENNPYLDTVKQIAADENAVVVVICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L++ ++ FL +LG++E LN +IRA + LL+L TYFT G +E+RAWTIP G++
Sbjct: 241 EAEISELDDDERDEFLTDLGMEEPGLNRVIRAGYELLNLHTYFTAGVQEVRAWTIPIGSS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA Y+DF+ + GE G K GK R EGK Y+V DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEITGYEDFIAFNGEAGAKENGKWRLEGKDYIVCDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386822507|ref|ZP_10109714.1| GTP-binding protein YchF [Serratia plymuthica PRI-2C]
gi|386380581|gb|EIJ21311.1| GTP-binding protein YchF [Serratia plymuthica PRI-2C]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ LN E+ +I++L+ LT+KP +++ANV E+G++NN LD+++ A + ++ +CA +
Sbjct: 181 LDLNEEDKAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|260582343|ref|ZP_05850136.1| translation-associated GTPase [Haemophilus influenzae NT127]
gi|319775678|ref|YP_004138166.1| GTP-binding protein [Haemophilus influenzae F3047]
gi|260094711|gb|EEW78606.1| translation-associated GTPase [Haemophilus influenzae NT127]
gi|317450269|emb|CBY86485.1| GTP-binding protein [Haemophilus influenzae F3047]
Length = 363
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374621843|ref|ZP_09694372.1| GTP-binding protein YchF [Ectothiorhodospira sp. PHS-1]
gi|373940973|gb|EHQ51518.1| GTP-binding protein YchF [Ectothiorhodospira sp. PHS-1]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALTK I AENYPFCTI+PN+G++ VPD RLK L IV
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIQAENYPFCTIDPNVGVVPVPDPRLKVLAGIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ + HV+RCF++D + H++G+++
Sbjct: 61 ERVLPTTVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIAHVVRCFENDDVIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +EK + + + N+ +I ++ +++ L + P R
Sbjct: 121 PLSDIEVIHTELALADLETVEKALTRLTRNAKSGNKDAIARKQVAEKVQAVLAEGRPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E + ++ L L+T KP +++ANV E+GF NN LLD+++ +A + ++ +CA +
Sbjct: 181 AELDDDERLLLRELQLITAKPTMYIANVNEDGFGNNPLLDRVREHAAVEQAQVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ DK FL +GL+E L+ +IRA++ LL L+T+FT G KE+RAWT+ G T
Sbjct: 241 EAEIAQLDEADKAEFLGEMGLEEAGLDRVIRAAYELLGLQTFFTAGVKEVRAWTVKRGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA I Y D++ KGEQG K+AGK R EGK+Y++++GD+++F
Sbjct: 301 APRAAGAIHTDFEKGFIRAEVIGYDDYVNCKGEQGAKDAGKWRLEGKEYIMKEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|293395765|ref|ZP_06640047.1| GTP-dependent nucleic acid-binding protein EngD [Serratia odorifera
DSM 4582]
gi|291421702|gb|EFE94949.1| GTP-dependent nucleic acid-binding protein EngD [Serratia odorifera
DSM 4582]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDTVRAIAAGEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRDEFMAELGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|378696576|ref|YP_005178534.1| GTP-binding protein [Haemophilus influenzae 10810]
gi|301169095|emb|CBW28692.1| predicted GTP-binding protein [Haemophilus influenzae 10810]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGVT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332306081|ref|YP_004433932.1| GTP-binding protein YchF [Glaciecola sp. 4H-3-7+YE-5]
gi|410643511|ref|ZP_11354007.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
chathamensis S18K6]
gi|410645148|ref|ZP_11355616.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
agarilytica NO2]
gi|332173410|gb|AEE22664.1| GTP-binding protein YchF [Glaciecola sp. 4H-3-7+YE-5]
gi|410135381|dbj|GAC04015.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
agarilytica NO2]
gi|410136921|dbj|GAC12194.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
chathamensis S18K6]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVDP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++G+IN
Sbjct: 61 KRIIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL EK + + K+ + + LK+L++I +L++ +R
Sbjct: 121 PQDDIDIINTELALADLETTEKALLRLAKRAKGGDADAKFELKVLEKIKPHLDEGELLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I ++N LT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA++
Sbjct: 181 VELEKEELKAISYMNFLTLKPTMYIANVNEDGFENNPYLDKVRAIAEGENAVVVAVCAEM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L + ++ F+ +GL+E LN +IR+ +SLL L TYFT G +E+RAWT P G+T
Sbjct: 241 EAEIGELEDDERAEFMAEMGLEEPGLNRVIRSGYSLLSLNTYFTAGVQEVRAWTFPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AGIIHTD ++GFIRA I Y +++ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQTAGIIHTDFEKGFIRAEVIGYDNYVEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|53729107|ref|ZP_00134068.2| COG0012: Predicted GTPase, probable translation factor
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207522|ref|YP_001052747.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165975492|ref|YP_001651085.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190149303|ref|YP_001967828.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250513|ref|ZP_07336710.1| translation-associated GTPase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251857|ref|ZP_07338028.1| translation-associated GTPase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|126096314|gb|ABN73142.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875593|gb|ABY68641.1| GTP-dependent nucleic acid-binding protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914434|gb|ACE60686.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649287|gb|EFL79472.1| translation-associated GTPase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650501|gb|EFL80660.1| translation-associated GTPase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKDAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|326423677|ref|NP_759269.2| GTP-binding and nucleic acid-binding protein YchF [Vibrio
vulnificus CMCP6]
gi|37197850|dbj|BAC93688.1| predicted GTPase [Vibrio vulnificus YJ016]
gi|319999032|gb|AAO08796.2| GTP-binding and nucleic acid-binding protein YchF [Vibrio
vulnificus CMCP6]
Length = 383
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDELAKIVNP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 QRILPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I ++ KK ++ + L +L++++ L + R
Sbjct: 141 PIEDIEVINLELAMADLDSCERAIQRQAKKAKGGDKDAKFELTVLEKLLPVLTEGGSART 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 201 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAAKENNVVVPVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + ++ FL ++G++E LN +IRA + LL L TYFT G KE+RAWTIP G T
Sbjct: 261 ESEMAELEDDERAEFLADMGIEEPGLNRVIRAGYELLSLHTYFTAGVKEVRAWTIPIGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA I+Y DF+ +KGE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APKAAGKIHTDFEKGFIRAEVIAYDDFIQFKGENGAKDAGKWRLEGKEYIVKDGDVVHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|407071528|ref|ZP_11102366.1| GTP-binding protein YchF [Vibrio cyclitrophicus ZF14]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I + KK ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRNAKKAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LT+KP +++ANV E+GF+NN LD ++ YA N+N ++ +CA +
Sbjct: 181 VELGKEEAAAIGYLNFLTLKPTMYIANVAEDGFENNPYLDAVREYAENENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + + F+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGFDHFIEFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|152997609|ref|YP_001342444.1| GTP-dependent nucleic acid-binding protein EngD [Marinomonas sp.
MWYL1]
gi|150838533|gb|ABR72509.1| GTP-binding protein YchF [Marinomonas sp. MWYL1]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S +N
Sbjct: 61 ERVLATTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNHVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI ELI +D+ ++K + + K N+ +I L+ I +L +P+R
Sbjct: 121 PKLDIEVINLELIFADIESIDKQLFRTAKNAKSGNKEAIAHKAFLESIKEHLENGLPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M +++E+ ++ L+LLT KP +++ANV E+GF+NN LDQ++ A + ++ IC +L
Sbjct: 181 MEMSDEQKKEVRSLHLLTTKPTMYIANVAEDGFENNPHLDQVRAIAEAEGAMVVPICNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L+ + + FLD +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELDTEEMQEFLDEMGMEEPGLDRVIRAGYELLGLQTYFTAGVKEVRAWTVKQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++GFIRA ISY DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 GPQAAGVIHTDFEKGFIRAEVISYNDFIQYKGESGAKEAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|270261419|ref|ZP_06189692.1| hypothetical protein SOD_a06510 [Serratia odorifera 4Rx13]
gi|270044903|gb|EFA17994.1| hypothetical protein SOD_a06510 [Serratia odorifera 4Rx13]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+G++NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRSEGKDYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374335065|ref|YP_005091752.1| GTP-binding protein YchF [Oceanimonas sp. GK1]
gi|372984752|gb|AEY01002.1| GTP-binding protein YchF [Oceanimonas sp. GK1]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 272/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD+RL+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDQRLQALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P HD EVI TEL L+DL E+ I + KK ++ + + +L++++ L ++ +R
Sbjct: 121 PKHDIEVINTELALADLDTCERAIQRNAKKAKGGDKDAKFEITVLEKLLPVLEEAKVLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LTIKP +++ANV ++GF++N L +++ A +N ++ +CA +
Sbjct: 181 VELTKEEQEAIAYLNFLTIKPTMYIANVNDDGFEDNPFLAEVEAIAAAENAIVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ + F+ ++GL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDAEEAAEFMADMGLEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ D++ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDYITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|161486644|ref|NP_933717.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio vulnificus
YJ016]
gi|320157145|ref|YP_004189524.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
vulnificus MO6-24/O]
gi|224184703|gb|ACN39578.1| YchF [Vibrio vulnificus]
gi|319932457|gb|ADV87321.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
vulnificus MO6-24/O]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I ++ KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRQAKKAKGGDKDAKFELTVLEKLLPVLTEGGSART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + ++ FL ++G++E LN +IRA + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDERAEFLADMGIEEPGLNRVIRAGYELLSLHTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA I+Y DF+ +KGE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGKIHTDFEKGFIRAEVIAYDDFIQFKGENGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421498088|ref|ZP_15945227.1| putative GTP-binding protein with nucleoside triP hydrolase
[Aeromonas media WS]
gi|407182908|gb|EKE56826.1| putative GTP-binding protein with nucleoside triP hydrolase
[Aeromonas media WS]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFEDENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + ++ L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVETLEKIRVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ LN LT+KP +++ANV E+GF NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKEELAAVAHLNFLTLKPTMYIANVAEDGFDNNPFLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDADRAEFMADLGIEEPGLNRVIRSGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386308707|ref|YP_006004763.1| GTP-binding and nucleic acid-binding protein YchF [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418241664|ref|ZP_12868189.1| GTP-binding protein YchF [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549278|ref|ZP_20505322.1| GTP-binding and nucleic acid-binding protein YchF [Yersinia
enterocolitica IP 10393]
gi|318605419|emb|CBY26917.1| GTP-binding and nucleic acid-binding protein YchF [Yersinia
enterocolitica subsp. palearctica Y11]
gi|351778929|gb|EHB21059.1| GTP-binding protein YchF [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788413|emb|CCO68362.1| GTP-binding and nucleic acid-binding protein YchF [Yersinia
enterocolitica IP 10393]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I EL LSDL E+ I + KK ++ + L+ L++ + +L + +R
Sbjct: 121 PADDIDTINAELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +
Sbjct: 181 LNLTAEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|229846480|ref|ZP_04466588.1| translation-associated GTPase [Haemophilus influenzae 7P49H1]
gi|229810573|gb|EEP46291.1| translation-associated GTPase [Haemophilus influenzae 7P49H1]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIETINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKIEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|50121110|ref|YP_050277.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium
atrosepticum SCRI1043]
gi|49611636|emb|CAG75085.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 363
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++++ +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSDDDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAVAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+++++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAEMDDADREEFMTELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325928011|ref|ZP_08189229.1| GTP-binding protein YchF [Xanthomonas perforans 91-118]
gi|325541625|gb|EGD13149.1| GTP-binding protein YchF [Xanthomonas perforans 91-118]
Length = 383
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 21 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 81 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 141 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 201 AGLDDEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAVEGAEVVPVSAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 261 EEELSQLDDADRDSFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 321 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|451811974|ref|YP_007448428.1| putative GTPase, probable translation factor [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777876|gb|AGF48824.1| putative GTPase, probable translation factor [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 357
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/363 (56%), Positives = 281/363 (77%), Gaps = 6/363 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNALT+ I+AENYPFCTIEPN+GI+EVPD RL +L IV
Sbjct: 1 MALQCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGIVEVPDIRLINLAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI A + VDIAGLVSGAS+GEGLGN+FL+HIRET+ +++V+RCF D I H S +I+
Sbjct: 61 EKIIHATAEFVDIAGLVSGASQGEGLGNQFLSHIRETDAILNVVRCFDDPDIIHYSDKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI++ E+I+TELIL+DL+ +E+ + K K N +I + +L R + +L+ + P+R
Sbjct: 121 PINEIEIIETELILADLSSIERILSKNQK-----NSTNIPV-HILNRCLKHLDNNRPLRD 174
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M+L+ ++ +K + LTIKPI++V NV E GF NN LLD+LK ++ +NIP++ ICA +
Sbjct: 175 MNLSIDDFSLLKNFSFLTIKPIMYVGNVNETGFVNNPLLDKLKDFSLKRNIPMVTICASV 234
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E++I+D++ D+K FL ++GL+E L+ LIR++FSLL L TYFTVG KE+RAWTIP G+T
Sbjct: 235 EQDIADMSEEDRKVFLKDMGLQEPGLDRLIRSAFSLLGLHTYFTVGVKEVRAWTIPMGST 294
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA T+SY DF+ Y GE K AGK+RSEGK Y+V+DGDI+NFL
Sbjct: 295 ASRAAGVIHTDFEKGFIRAQTVSYDDFIKYNGELKAKEAGKVRSEGKDYIVKDGDIMNFL 354
Query: 361 FNI 363
FN+
Sbjct: 355 FNV 357
>gi|423205679|ref|ZP_17192235.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AMC34]
gi|404623070|gb|EKB19922.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AMC34]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVEVLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ LN LT+KP +++ANV E+GF+NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKEELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|390991982|ref|ZP_10262231.1| GTP-dependent nucleic acid-binding protein engD [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372553269|emb|CCF69206.1| GTP-dependent nucleic acid-binding protein engD [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDSFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|333907085|ref|YP_004480671.1| GTP-binding protein YchF [Marinomonas posidonica IVIA-Po-181]
gi|333477091|gb|AEF53752.1| GTP-binding protein YchF [Marinomonas posidonica IVIA-Po-181]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLDALSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ ++N
Sbjct: 61 EKVLATTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVANQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI ELI +DL +EK I + K N+ +I L+ + +L P+R+
Sbjct: 121 PKADIEVINLELIFADLESIEKQILRTAKNAKSGNKEAIAHKAFLESVKQHLEDGKPVRV 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L++++ IK L+LLT KP +++ANV E+GF+NN L+ +K A + ++ IC +L
Sbjct: 181 MELSDDQAKEIKQLHLLTTKPTMYIANVAEDGFENNPHLNVVKEIAAEEGAMVVPICNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L+ + + FLD +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELDAEEMQDFLDEMGMEEPGLDRVIRAGYELLGLQTYFTAGVKEVRAWTVKQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG+IHTD ++GFIRA + Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 GPQAAGVIHTDFEKGFIRAEVVGYDDFIQYKGESGAKEAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|229844444|ref|ZP_04464584.1| translation-associated GTPase [Haemophilus influenzae 6P18H1]
gi|229812693|gb|EEP48382.1| translation-associated GTPase [Haemophilus influenzae 6P18H1]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKIEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|334704046|ref|ZP_08519912.1| GTP-binding protein YchF [Aeromonas caviae Ae398]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF+D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFEDENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I++++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAINRQSKRAKGGDKDAKLEVEVLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +EL ++ LN LT+KP +++ANV E+GF+NN LDQ++ A +N ++++C +
Sbjct: 181 MKLDKDELDAVSHLNFLTLKPTMYIANVAEDGFENNPYLDQVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|441506402|ref|ZP_20988374.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium
sp. AK15]
gi|441425944|gb|ELR63434.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium
sp. AK15]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I ++ K+ ++ + + +L++++ L + R
Sbjct: 121 PLDDIEVINLELALADLDTCERAIQRQAKRAKGGDKDAKFEIAVLEKMLPTLTEGGMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VELTKEEFAAISYLNFLTLKPTMYIANVNEDGFEDNEYLDMVREHAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ D++ FL ++G++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDADREEFLADMGIEEPGLNRVIRSGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG IHTD ++GFIRA I Y F+ +KGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGKIHTDFEKGFIRAEVIGYDHFIEFKGESGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|425062845|ref|ZP_18465970.1| GTP-binding and nucleic acid-binding protein YchF [Pasteurella
multocida subsp. gallicida X73]
gi|404383551|gb|EJZ80002.1| GTP-binding and nucleic acid-binding protein YchF [Pasteurella
multocida subsp. gallicida X73]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGQIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PAEDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 IDLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +L ++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDDEKIEFLQDLSIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A ++A +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKSAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417949877|ref|ZP_12593007.1| GTP-binding protein YchF [Vibrio splendidus ATCC 33789]
gi|342807601|gb|EGU42787.1| GTP-binding protein YchF [Vibrio splendidus ATCC 33789]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H+SG+++
Sbjct: 61 QKILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I + KK ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRNAKKAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LT+KP +++ANV E+GF+NN LD ++ YA +N ++ +CA +
Sbjct: 181 VELAKEEAAAIGYLNFLTLKPTMYIANVAEDGFENNPYLDAVREYAAKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y F+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDHFIEFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|78046539|ref|YP_362714.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|346723863|ref|YP_004850532.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
axonopodis pv. citrumelo F1]
gi|78034969|emb|CAJ22614.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|346648610|gb|AEO41234.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
axonopodis pv. citrumelo F1]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDDEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAVEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDSFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|294627826|ref|ZP_06706405.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292597740|gb|EFF41898.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDSFLTDLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|21241722|ref|NP_641304.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
axonopodis pv. citri str. 306]
gi|381171813|ref|ZP_09880953.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas citri
pv. mangiferaeindicae LMG 941]
gi|418518295|ref|ZP_13084444.1| GTP-binding protein YchF [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|21107091|gb|AAM35840.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|380687773|emb|CCG37440.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas citri
pv. mangiferaeindicae LMG 941]
gi|410704372|gb|EKQ62856.1| GTP-binding protein YchF [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDTDRDSFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387886951|ref|YP_006317250.1| translation-associated GTPase [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871767|gb|AFJ43774.1| translation-associated GTPase [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I NYPFCTI+PN+GI+ VPD+RL L IVK
Sbjct: 1 MRFKCGIVGLPNVGKSTLFNALTEAGIEVANYPFCTIDPNVGIVSVPDQRLNELAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P I+ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H+SG+++
Sbjct: 61 ERILPTTIEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNIIHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D I ELIL+D+ +K + + K ++ ++ ++ +L P R
Sbjct: 121 PIEDINTINMELILADIESCDKAVQRFAKMKKSGDKEALAKADFYTKLKEHLESEKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K LLT KP++++AN+ E+GF+NN LLD++ YA N ++ +CA +
Sbjct: 181 FQLTDDEAKWLKQTPLLTSKPVLYIANITEDGFENNPLLDKVIEYAKAANSNVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS L +K FL ++GL ET L+ +I+A ++LL+L TY T G KE+RAWTIP G T
Sbjct: 241 EQEISQLEPDEKLEFLADMGLTETGLDRVIKAGYALLNLHTYLTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA ISY D++ Y GE+G K AGK R EGK+Y+++DGD++NF
Sbjct: 301 APRAAGVIHTDFERGFIRAEVISYDDYIQYNGEKGAKEAGKARLEGKEYIMKDGDVVNFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|212558124|gb|ACJ30578.1| GTP-binding protein, putative [Shewanella piezotolerans WP3]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDSRLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ +++
Sbjct: 61 ERIMPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ + + + +L+++ L++ +R
Sbjct: 121 PASDIEVINTELALADLDSCERAITRQAKRAKGGDADAKFEVAVLEKMRPVLDEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L EEL ++ +LN LTIKP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 MELTKEELAAVGYLNFLTIKPTMYIANVSEDGFENNPHLDTVRAIAAEENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D+ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G +
Sbjct: 241 ESELAEMDAEDRNEFMADLGLEEPGLDRVIRAGYDLLTLQTYFTAGVKEVRAWTVRIGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y DF+ YKGE G K AGK+R EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|90416944|ref|ZP_01224873.1| putative GTP-binding protein [gamma proteobacterium HTCC2207]
gi|90331291|gb|EAS46535.1| putative GTP-binding protein [gamma proteobacterium HTCC2207]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK ISAEN+PFCTIEPN G++ +PD R ++ IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGISAENFPFCTIEPNTGVVPIPDPRQDLISAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFL IRET+ + HV+RCF D+ + H+ G I+
Sbjct: 61 QRIVPTSMEFVDIAGLVAGASKGEGLGNKFLGTIRETHAIAHVVRCFDDENVIHVEGTIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL L+DL +EK I + K K++ ++ + + ++I+ +LN++ P+R
Sbjct: 121 PSDDIDVINTELALADLDTVEKAILRAAKAAKGKDQDAVAIKAVAEKILPHLNEAKPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++EL +K L+LLT+KP +++ANV E GF+NN LD + A + ++ IC KL
Sbjct: 181 FELTDDELAILKPLSLLTLKPTMYIANVDEEGFENNPYLDAVIAIAEAEGSIVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FL+ +G++E LN +IRA ++LL+L+TYFT G +E+RAWTIP G T
Sbjct: 241 EAEISELEDDEKVEFLEEMGMQEPGLNRVIRAGYNLLNLQTYFTAGVQEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG IHTD ++GFIRA I Y D++ GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGKIHTDFEKGFIRAEIIGYDDYIAGNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|317491745|ref|ZP_07950180.1| GTP-binding protein YchF [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365834501|ref|ZP_09375947.1| GTP-binding protein YchF [Hafnia alvei ATCC 51873]
gi|316920179|gb|EFV41503.1| GTP-binding protein YchF [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364569278|gb|EHM46901.1| GTP-binding protein YchF [Hafnia alvei ATCC 51873]
Length = 363
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ + + KK ++ + L L++ + L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAMHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDTVREIAAKEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS+ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|145630434|ref|ZP_01786215.1| GTP-binding protein [Haemophilus influenzae R3021]
gi|144984169|gb|EDJ91606.1| GTP-binding protein [Haemophilus influenzae R3021]
Length = 363
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTEAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFSGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|373467439|ref|ZP_09558736.1| GTP-binding protein YchF [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371758640|gb|EHO47403.1| GTP-binding protein YchF [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 363
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PQDDIDTINTELALADLDSCERAIQRLQKRAKGDDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387121520|ref|YP_006287403.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429733434|ref|ZP_19267654.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans Y4]
gi|385876012|gb|AFI87571.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429154911|gb|EKX97620.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans Y4]
Length = 363
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK +I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKARIEAANYPFCTIEPNTGVVLMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P++D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L+++ IR
Sbjct: 121 PLNDIDTINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLSEAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ +A + ++ +CA +
Sbjct: 181 VPLDKDELFAIKSYNFLTLKPTMYIANVNEDGFENNPYLDKVREFAEKEGSVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +I A ++LL+L+TYFT KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKLEFLQDLGIEEPGLNRVIHAGYALLNLQTYFTASVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|146311991|ref|YP_001177065.1| GTP-dependent nucleic acid-binding protein EngD [Enterobacter sp.
638]
gi|145318867|gb|ABP61014.1| GTP-binding protein YchF [Enterobacter sp. 638]
Length = 363
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELVALEKCLPQLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LALTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAGEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFIAYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417839506|ref|ZP_12485684.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M19107]
gi|417842936|ref|ZP_12489014.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21127]
gi|341950812|gb|EGT77397.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21127]
gi|341952474|gb|EGT79000.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M19107]
Length = 363
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PQDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|342905160|ref|ZP_08726950.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21621]
gi|341951720|gb|EGT78276.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21621]
Length = 363
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PQDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|417845408|ref|ZP_12491437.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21639]
gi|341955244|gb|EGT81705.1| GTP-dependent nucleic acid-binding protein engD [Haemophilus
haemolyticus M21639]
Length = 363
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDQRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PQDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLKNAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIATKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKEYVVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|375336281|ref|ZP_09777625.1| GTP-binding protein YchF [Succinivibrionaceae bacterium WG-1]
Length = 365
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL+ L +I
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIDAANFPFCTIEPNTGIVPVPDPRLEKLASIDHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KI P ++ VDIAGLV GAS GEGLGNKFL +I+ET+ + HV+RCF D I H+SG++N
Sbjct: 61 LKIVPTTMEFVDIAGLVKGASNGEGLGNKFLMNIKETDAIAHVVRCFDDPNIIHVSGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL EK + + KK ++ +I +K+L++ LN +
Sbjct: 121 PAEDIEVINTELALADLETCEKAMHRFEKKAKGGDKEAIAAMKVLEKCHPILNDCKKLLG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I+ N LT+KP +++ANV E+GF+NN LD++K A + ++ +CA +
Sbjct: 181 LELSKEELFAIRECNFLTLKPTMYIANVAEDGFQNNPFLDEVKKIADAEGSVVVPVCASV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +++ +++ +++ F+++LG E LN +IRA + LL+L TYFT G+KE+RAWTIP G T
Sbjct: 241 ESDLAAMDDEERQEFMESLGFDEPGLNRVIRAGYKLLNLHTYFTAGEKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TISY+D++ Y GE G K AG++R+EGK Y+V+DGD++ FL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISYEDYIKYNGENGAKEAGRMRAEGKDYIVQDGDVITFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|304415229|ref|ZP_07395935.1| putative GTP-binding protein [Candidatus Regiella insecticola LSR1]
gi|304282918|gb|EFL91375.1| putative GTP-binding protein [Candidatus Regiella insecticola LSR1]
Length = 363
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET+ + HV+RCF ++ I H++G+IN
Sbjct: 61 QRIVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETDAIGHVVRCFANENIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I ELI DL I E+ I + KK ++ + L +L++ + +L K +R
Sbjct: 121 PSEDIDTINIELISYDLDICERAISRVQKKAKGGDKDAKATLSVLEKCLSHLEKIAMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I++LN LT+KP +++ANV E+GF+NN L Q++ A + +I +CA
Sbjct: 181 LALTEEEKAAIRYLNFLTLKPTMYIANVNEDGFENNPYLAQVQKIAEQEGAIVIAVCAAA 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LG+ E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELTDGDRAEFMAALGMDEAGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ Y+GEQ K AGK+R+EGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTINFADFIAYRGEQAAKEAGKMRAEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|88810859|ref|ZP_01126116.1| GTP-binding protein, HSR1-related [Nitrococcus mobilis Nb-231]
gi|88792489|gb|EAR23599.1| GTP-binding protein, HSR1-related [Nitrococcus mobilis Nb-231]
Length = 363
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ +++AENYPFCTI+P++G + VPD RL L IV+
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTRNQVAAENYPFCTIDPHVGTVPVPDPRLAQLAEIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P +++ VDIAGLV+GASKGEGLGN+FLAHIRET+ V HV+RCF+D I H+ G I+
Sbjct: 61 QKIVPTVMEFVDIAGLVAGASKGEGLGNRFLAHIRETDAVAHVVRCFEDVDIHHVCGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E +QTELIL+DL + K +D+ ++ ++ +I L +I LN+ P+R
Sbjct: 121 PAADIETLQTELILADLESVAKALDRYQRRAKANDKQAIAYRDWLGQIAEALNEGTPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L ++ L+LLT KP++++ANV E+GF +N LD ++ A +N + +CA +
Sbjct: 181 QNLGEAVQPLLQELHLLTAKPVLYIANVTEDGFVDNPRLDAVRRIAAQENAAVTPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L++ ++ FL GL+E L+ +IRA + LL L+T+FT G KE+RAWT+ G +
Sbjct: 241 EAELAQLDDRERAGFLAEYGLEEPGLDRVIRAGYRLLGLQTFFTAGPKEVRAWTVKTGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I + DF+ +GEQG K G++R EGK+YLV++GD+++F
Sbjct: 301 APQAAGRIHTDFERGFIRAEVIGFDDFIRCRGEQGAKETGRMRLEGKEYLVQEGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|157962950|ref|YP_001502984.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
pealeana ATCC 700345]
gi|157847950|gb|ABV88449.1| GTP-binding protein YchF [Shewanella pealeana ATCC 700345]
Length = 363
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDTRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++ +++
Sbjct: 61 ERVLATTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL E+ I ++ K+ + + + +L+++ L++ +R
Sbjct: 121 PASDIEVINTELALADLDSCERAITRQAKRAKGGDTEAKFEVAVLEKMRPVLDEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L EEL +I +LN LT+KP +++ANV E+GF+NN LD +K A +N ++ +CA +
Sbjct: 181 MELTKEELAAIGYLNFLTLKPTMYIANVAEDGFENNPHLDTVKALAAEENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++++ D++ F+ +LGL+E L+ +IRA + LL L+TYFT G KE+RAWT+ G +
Sbjct: 241 ESELAEMDAEDREEFMADLGLEEPGLDRVIRAGYDLLSLQTYFTAGVKEVRAWTVRIGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y DF+ YKGE G K AGK+R EGK Y V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLRVEGKTYTVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|146283517|ref|YP_001173670.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
stutzeri A1501]
gi|418295018|ref|ZP_12906893.1| GTP-binding protein YchF [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|145571722|gb|ABP80828.1| GTP-binding protein YchF [Pseudomonas stutzeri A1501]
gi|379066376|gb|EHY79119.1| GTP-binding protein YchF [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 366
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFQDDNVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVAQKALLEKLIPHFTEGKPART 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L EE ++ +LLT KP++++ANV E+GF+NN LLD ++ A + P++ +C
Sbjct: 181 LLKTLGTEEKAMVRGFHLLTSKPVMYIANVAEDGFENNPLLDVVQAIADAEGAPVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLESLGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ++Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVVAYDDFIAYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|322832998|ref|YP_004213025.1| GTP-binding protein YchF [Rahnella sp. Y9602]
gi|321168199|gb|ADW73898.1| GTP-binding protein YchF [Rahnella sp. Y9602]
Length = 363
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDVVRKIADAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|145634611|ref|ZP_01790320.1| predicted GTPase, probable translation factor [Haemophilus
influenzae PittAA]
gi|145268156|gb|EDK08151.1| predicted GTPase, probable translation factor [Haemophilus
influenzae PittAA]
Length = 363
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 VGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDCVREIAAKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA ++LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|395232428|ref|ZP_10410679.1| GTP-binding protein YchF [Enterobacter sp. Ag1]
gi|394733414|gb|EJF33042.1| GTP-binding protein YchF [Enterobacter sp. Ag1]
Length = 364
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAGEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLSLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|289207533|ref|YP_003459599.1| GTP-binding protein YchF [Thioalkalivibrio sp. K90mix]
gi|288943164|gb|ADC70863.1| GTP-binding protein YchF [Thioalkalivibrio sp. K90mix]
Length = 364
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 264/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+LKCG++GLPNVGKSTLFNALT+ +I+AENYPFCTI+PN+G++EVPD RL L IVK
Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTRAEIAAENYPFCTIDPNVGVVEVPDPRLARLTEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ ++ VDIAGLV+GA++GEGLGN+FLAHIRET+ + V+RCF+DD I H++G+++
Sbjct: 61 ERTLATTVEFVDIAGLVAGAAQGEGLGNQFLAHIRETDAIAQVVRCFEDDDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL+L+DL K + + + +++ +I LK +++ L++ +P R
Sbjct: 121 PLADIETISTELMLADLETANKALTRLARAAKSQDKTAIAQLKAAEKVAAGLDQGVPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK-NNLLLDQLKIYAHNQNIPIIIICAK 239
L+ +E + L+LLTIKP++++ANV E N +++ ++ A + ++ +CA
Sbjct: 181 QDLDEDERRLLYDLHLLTIKPLMYIANVDEASLAGGNAMVEAVQAKAAEEGAEVVSVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+ L+ ++ FL +LGL+E L+ +IR ++ LLDL+T+FT G+KE+RAWT+ G+
Sbjct: 241 IEAEIAVLDPEERVEFLADLGLEEPGLDRVIRTAYRLLDLQTFFTAGEKEVRAWTVRRGS 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD +RGFIRA + Y DF+ GEQG K+AGK R EGK+YL+ +GD+++F
Sbjct: 301 TAPQAAGVIHTDFERGFIRAEVVGYDDFVANNGEQGAKDAGKWRLEGKEYLMHEGDVVHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|262274714|ref|ZP_06052525.1| GTP-binding and nucleic acid-binding protein YchF [Grimontia
hollisae CIP 101886]
gi|262221277|gb|EEY72591.1| GTP-binding and nucleic acid-binding protein YchF [Grimontia
hollisae CIP 101886]
Length = 363
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G++N
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+D+ E+ I ++ KK + + + +L++++ L + +R
Sbjct: 121 PADDIEVINTELALADMEACERAIQRQAKKAKGGDRDAKFEISVLEKLLPVLEEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LT+KP +++ANV ++GF+NN LDQ++ A + ++ +CA++
Sbjct: 181 VKLTKEEKAAIDYLNFLTMKPTMYIANVNDDGFENNPYLDQVREIAEAEGATVVAVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L+ + FL+ +GL+E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EGELSELDAEEAAVFLEEMGLEEPGLNRVIRAGYELLALQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IH+D ++GFIRA I Y DF+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHSDFEKGFIRAEIIGYDDFIEHNGEAGAKVAGKWRLEGKDYIVQDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|218708749|ref|YP_002416370.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio splendidus
LGP32]
gi|218321768|emb|CAV17723.1| GTP-dependent nucleic acid-binding protein [Vibrio splendidus
LGP32]
Length = 383
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL L IV
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALAKIVNP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H+SG+++
Sbjct: 81 QKILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVSGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I + KK ++ + +L++++ L + R
Sbjct: 141 PIEDIEVINLELALADLDSCERAIFRNAKKAKGGDKDAKFETTVLEKLLPILTEGGMART 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE+ +I +LN LT+KP +++ANV E+GF+NN LD ++ YA +N ++ +CA +
Sbjct: 201 VELAKEEVAAIDYLNFLTLKPTMYIANVAEDGFENNPYLDAVREYAEKENNVVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 261 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y+ F+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFEKGFIRAEVVGYEHFIEFGGESGAKDAGKWRLEGKEYIVKDGDVVHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|330828695|ref|YP_004391647.1| putative GTP-binding protein with nucleoside triP hydrolase domain
[Aeromonas veronii B565]
gi|423210619|ref|ZP_17197173.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AER397]
gi|328803831|gb|AEB49030.1| Putative GTP-binding protein with nucleoside triP hydrolase domain
[Aeromonas veronii B565]
gi|404615590|gb|EKB12560.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AER397]
Length = 363
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + +++L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVEVLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ LN LT+KP +++ANV E+GF+NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKEELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFINYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|418523111|ref|ZP_13089135.1| GTP-binding protein YchF [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410700267|gb|EKQ58829.1| GTP-binding protein YchF [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 363
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDVAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDTDRDSFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|389795957|ref|ZP_10199063.1| GTP-binding protein YchF [Rhodanobacter fulvus Jip2]
gi|388430007|gb|EIL87221.1| GTP-binding protein YchF [Rhodanobacter fulvus Jip2]
Length = 362
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 267/363 (73%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PIADIETIDTELALADLESVDKALNRAERAAKANDKEALARKPVLQKLSTGLNEGKSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV ++GF+NN LLD ++ A + ++ +CA +
Sbjct: 180 LGLDEEEKALVRDLFLLTLKPLMYIANVPDDGFENNPLLDVVRERAAAEGAEVVPVCASI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L++ D+ FL ++GL E LN +IRA + LLDL+TYFT G KE+RAW + G++
Sbjct: 240 EEEMAQLDDADRDEFLKDMGLDEPGLNRVIRAGYKLLDLQTYFTAGVKEVRAWQLRRGSS 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D ++GFIRA TI Y DF+ YKGE G AG++R EGK+Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHSDFEKGFIRAETIGYDDFIQYKGEAGAAAAGRLRKEGKEYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|389799526|ref|ZP_10202506.1| GTP-binding protein YchF [Rhodanobacter sp. 116-2]
gi|388442206|gb|EIL98416.1| GTP-binding protein YchF [Rhodanobacter sp. 116-2]
Length = 362
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 264/363 (72%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IV
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLAHIRE + + HV+RCF+ D + H++G+++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIAHVVRCFEGD-VIHVAGKVD 119
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TEL L+DL ++K +++ + ++ ++ +L+++ LN+ R
Sbjct: 120 PISDIDTIDTELALADLESVDKALNRAERAAKANDKEALARKPVLQKLAAALNEGRSARS 179
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV ++GF++N LLD ++ A + ++ +CA +
Sbjct: 180 VGLDEEEKALVRDLFLLTLKPLMYIANVADDGFEHNPLLDAVRERAVAEGAEVVPVCAAI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE++ L+ D+ FL ++GL E LN +IRA + LLDL+TYFT G KE+RAW + G T
Sbjct: 240 EEELAQLDEADRDEFLKDMGLDEPGLNRVIRAGYKLLDLQTYFTAGVKEVRAWQVKRGAT 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA T+ Y DF+ YKGE G AG++R EGK Y+V+DGD+L+FL
Sbjct: 300 APQAAGVIHTDFERGFIRAETVGYDDFIQYKGEAGAAAAGRLRKEGKDYIVKDGDVLHFL 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|308050542|ref|YP_003914108.1| GTP-binding protein YchF [Ferrimonas balearica DSM 9799]
gi|307632732|gb|ADN77034.1| GTP-binding protein YchF [Ferrimonas balearica DSM 9799]
Length = 363
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDARLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GAS GEGLGNKFLA+IRET+ + HV+RCF++D I H++G +N
Sbjct: 61 QRVLPTTMEFVDIAGLVKGASTGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGGVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+D+ +EK + + K+ ++ + + +L++++ L + R
Sbjct: 121 PAEDIEVINTELALADMDAVEKALQRLAKRAKGGDKDAKAEILVLEKVLPTLEQGGMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE I+++ LLT+KP +++ANV ++GF+NN LDQ++ A +N ++ +CA++
Sbjct: 181 VALEPEEKARIQYMGLLTLKPTMYIANVNDDGFENNPYLDQVREIAAKENAVVVPVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDEERVEFMADLGIEEPGLNRVIRSGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG IHTD +RG+IRA I+Y D++ GE K AGK RSEGK+Y+V+DGD+++FL
Sbjct: 301 GPQAAGKIHTDFERGYIRAEVIAYDDYIALGGENAAKEAGKKRSEGKEYIVKDGDVIHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|91792180|ref|YP_561831.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella
denitrificans OS217]
gi|91714182|gb|ABE54108.1| conserved hypothetical protein [Shewanella denitrificans OS217]
Length = 363
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 271/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D I H++ +++
Sbjct: 61 QRVIPTSMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDPNIVHVANKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL LE+ + ++ KK ++ + +++L+++ L+++ +R
Sbjct: 121 PAGDIEVINTELALADLDSLERAVFRQQKKAKGGDKDAKFEIEVLEKMRPTLDEAKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 LDLSKEELAAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAATENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++++ ++ F+ +LG++E L+ +IRA +SLL+L+TYFT G KE+RAWT+P G +
Sbjct: 241 ESELAEMEADERDEFMADLGIEEPGLDRVIRAGYSLLNLQTYFTAGVKEVRAWTVPIGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA ++Y DF+ YKGE G K+AGK++ EGK Y+V+DGD+++FL
Sbjct: 301 APQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKDAGKLKVEGKTYIVKDGDVMHFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|389706441|ref|ZP_10186454.1| GTP-binding protein YchF [Acinetobacter sp. HA]
gi|388610576|gb|EIM39693.1| GTP-binding protein YchF [Acinetobacter sp. HA]
Length = 363
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ +I +L +I+ L++ P R
Sbjct: 121 PLDDIATINTELALADLETVTKAVTRLAKSAKGGDKEAIATKAVLDKILPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+++E ++ LLT+KP +++ANV E+GF+NN LD ++ A +N ++ +C ++
Sbjct: 181 ATLDDDERKLVRGFGLLTLKPTMYIANVAEDGFENNPHLDAVRELAAAENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECIAYDDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|375261431|ref|YP_005020601.1| GTP-binding protein YchF [Klebsiella oxytoca KCTC 1686]
gi|397658533|ref|YP_006499235.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
oxytoca E718]
gi|423108939|ref|ZP_17096634.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5243]
gi|365910909|gb|AEX06362.1| GTP-binding protein YchF [Klebsiella oxytoca KCTC 1686]
gi|376383133|gb|EHS95861.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5243]
gi|394346824|gb|AFN32945.1| GTP-binding and nucleic acid-binding protein YchF [Klebsiella
oxytoca E718]
Length = 364
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 268/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRS 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|289667605|ref|ZP_06488680.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 363
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHALTEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVRAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|423114899|ref|ZP_17102590.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5245]
gi|376383774|gb|EHS96501.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5245]
Length = 364
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 268/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRS 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKTAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|418019200|ref|ZP_12658721.1| GTP-binding protein YchF [Candidatus Regiella insecticola R5.15]
gi|347605446|gb|EGY29891.1| GTP-binding protein YchF [Candidatus Regiella insecticola R5.15]
Length = 366
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET+ + HV+RCF ++ I H++G+I
Sbjct: 61 QRIVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETDAIGHVVRCFANENIVHVAGKIA 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TELI DL + E+ I + KK ++ + L +L++ + +L K +R
Sbjct: 121 PIEDIDTINTELISYDLDMCERAISRVQKKAKGGDKDARTTLAVLEKCLSHLEKIAMLRT 180
Query: 181 MS---LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIIC 237
++ L EE +I++LN LT+KP +++ANV E+GF+NN LDQ++ A + +I +C
Sbjct: 181 LAPTELTEEEKAAIRYLNFLTLKPTMYIANVNEDGFENNPYLDQVQKIAEQEGAIVIAVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A E +I++L + D+ F+ LG+ E LN +IRA + LL+L+TYFT G KE+RAWTIP
Sbjct: 241 AAAESDIAELTDGDRAEFMAALGMDEAGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG IHTD ++GFIRA TI++ DF+ Y+GEQ K AGK+R+EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGKIHTDFEKGFIRAQTINFADFIAYRGEQAAKEAGKMRAEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
NFLFN+
Sbjct: 361 NFLFNV 366
>gi|333926789|ref|YP_004500368.1| GTP-binding protein YchF [Serratia sp. AS12]
gi|333931743|ref|YP_004505321.1| GTP-binding protein YchF [Serratia plymuthica AS9]
gi|386328612|ref|YP_006024782.1| GTP-binding protein YchF [Serratia sp. AS13]
gi|421783058|ref|ZP_16219510.1| putative GTP-binding protein [Serratia plymuthica A30]
gi|333473350|gb|AEF45060.1| GTP-binding protein YchF [Serratia plymuthica AS9]
gi|333490849|gb|AEF50011.1| GTP-binding protein YchF [Serratia sp. AS12]
gi|333960945|gb|AEG27718.1| GTP-binding protein YchF [Serratia sp. AS13]
gi|407754764|gb|EKF64895.1| putative GTP-binding protein [Serratia plymuthica A30]
Length = 363
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+G++NN LD+++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254362623|ref|ZP_04978712.1| possible GTP-binding protein [Mannheimia haemolytica PHL213]
gi|261491679|ref|ZP_05988261.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494202|ref|ZP_05990702.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|452745703|ref|ZP_21945536.1| GTP-binding protein YchF [Mannheimia haemolytica serotype 6 str.
H23]
gi|153094237|gb|EDN75108.1| possible GTP-binding protein [Mannheimia haemolytica PHL213]
gi|261310105|gb|EEY11308.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312694|gb|EEY13815.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|452086305|gb|EME02695.1| GTP-binding protein YchF [Mannheimia haemolytica serotype 6 str.
H23]
Length = 363
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|329897179|ref|ZP_08271919.1| GTP-binding and nucleic acid-binding protein YchF [gamma
proteobacterium IMCC3088]
gi|328921334|gb|EGG28728.1| GTP-binding and nucleic acid-binding protein YchF [gamma
proteobacterium IMCC3088]
Length = 364
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 263/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD R ++ +VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNSGVVPVPDPRQTEISKLVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF DD + H++ ++N
Sbjct: 61 EREVSTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFSDDNVIHVANKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIF-NLNKSIPIR 179
P D EVI TEL L+DL EK + K + ++ ++ + LL+ ++ +LN++ P+R
Sbjct: 121 PAEDIEVINTELALADLESCEKQLQKVVRTAKSGDKEAVAMKALLEDVLLPHLNEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L++ + ++ L+LLT+KP +++ANV E G N +DQ+K A ++N +++IC K
Sbjct: 181 ALALDDNQRALVRTLHLLTVKPTMYIANVDEEGVDGNEYVDQVKAIAADENAIVVVICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI++L + ++ FL +LG++E L+ +IRA + LL L+TYFT G KE+RAWT+ G
Sbjct: 241 LESEIAELEDDERAEFLADLGMEEPGLDRVIRAGYQLLGLQTYFTAGVKEVRAWTVKVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG+IHTD ++GFIRA I Y DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 TAPEAAGVIHTDFQKGFIRAEVIGYNDFIQYKGEAGAKEAGKWRLEGKDYIVKDGDVIHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|421724815|ref|ZP_16164022.1| GTP-binding protein YchF [Klebsiella oxytoca M5al]
gi|410374384|gb|EKP29058.1| GTP-binding protein YchF [Klebsiella oxytoca M5al]
Length = 364
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|418297115|ref|ZP_12908957.1| GTP-binding protein YchF [Agrobacterium tumefaciens CCNWGS0286]
gi|355538213|gb|EHH07460.1| GTP-binding protein YchF [Agrobacterium tumefaciens CCNWGS0286]
Length = 367
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/366 (53%), Positives = 257/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R+K L +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDARMKILADIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+LSDL LE+ ++ K+ K++ S+ L L++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLSDLESLERRTEQTRKRATGKDKESLAQLPLMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EEL ++ LNLLT P+++V NV E + N + A Q ++I
Sbjct: 181 TLLSTLDAEELRILQGLNLLTAHPVLYVCNVAESDAVDGNEHTKAVAEMAKAQGAESVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPDEESKEFLSALGLEEAGLDRLIRAGYKLLDLITYFTVGPKECRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ +KGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYNDYVAFKGEVGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|407692991|ref|YP_006817780.1| GTP-binding protein YchF [Actinobacillus suis H91-0380]
gi|407389048|gb|AFU19541.1| GTP-binding protein YchF [Actinobacillus suis H91-0380]
Length = 363
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIEIINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I Y+DF+ KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIGYQDFIDNKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387771054|ref|ZP_10127226.1| GTP-binding protein YchF [Pasteurella bettyae CCUG 2042]
gi|386902973|gb|EIJ67794.1| GTP-binding protein YchF [Pasteurella bettyae CCUG 2042]
Length = 363
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+IN
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIDIINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSVMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL++IK N LT+KP +++ANV E+GF+NN L Q++ A + ++ +CA +
Sbjct: 181 IGLDKDELLAIKSYNFLTLKPTMYIANVNEDGFENNPYLAQVREIAEKEGAMVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDEKIEFLQDLGIEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y+DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYQDFIEFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|423200745|ref|ZP_17187325.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AER39]
gi|404619563|gb|EKB16473.1| GTP-dependent nucleic acid-binding protein engD [Aeromonas veronii
AER39]
Length = 363
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 270/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D+ I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + ++ L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVETLEKIKVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ LN LT+KP +++ANV E+GF+NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKEELAAVSHLNFLTLKPTMYIANVAEDGFENNPYLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYQLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFINYKGEQGAKEAGKMRAEGKDYIVKDGDIMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|172087678|ref|YP_204145.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio fischeri
ES114]
gi|197334612|ref|YP_002155523.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio fischeri
MJ11]
gi|423685491|ref|ZP_17660299.1| GTP-binding protein YchF [Vibrio fischeri SR5]
gi|171902271|gb|AAW85257.2| predicted GTP-binding protein [Vibrio fischeri ES114]
gi|197316102|gb|ACH65549.1| GTP-binding protein YchF [Vibrio fischeri MJ11]
gi|371495403|gb|EHN70999.1| GTP-binding protein YchF [Vibrio fischeri SR5]
Length = 363
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E+I EL L+DL E+ + + KK ++ + + +L++++ L + R
Sbjct: 121 PIEDIEIINLELALADLDSCERAMQRNAKKAKGGDKDAKFEISVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +LN LT+KP +++ANV E+GF++N LD ++ YA +N ++ +CA +
Sbjct: 181 VELTKEEAAAIGYLNFLTLKPTMYIANVSEDGFEDNPFLDMVREYAEKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I Y +F+ + GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVIGYDNFIEFNGESGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|119477475|ref|ZP_01617666.1| predicted GTPase, probable translation factor [marine gamma
proteobacterium HTCC2143]
gi|119449401|gb|EAW30640.1| predicted GTPase, probable translation factor [marine gamma
proteobacterium HTCC2143]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ +PD R L +IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNSGIVPIPDPRQDKLADIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+++ + H++ +I+
Sbjct: 61 ERVVPTTMEFVDIAGLVEGASKGEGLGNQFLANIRETDAIAHVVRCFENENVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P +D E+I EL L+DL +EK + + + ++ + L++++I +L + + +R
Sbjct: 121 PANDIEIINMELALADLDSVEKQLQRVTRNAKGGDKEAAAQKALIEKLIPHLEEGVSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SL+ E + L+LLT KP +++ANV E+GF++N LD ++ A +N ++ IC KL
Sbjct: 181 LSLSEAEQAILPSLHLLTTKPTMYIANVDEDGFEDNPFLDVVREIAAAENAALVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ +K FL++LG++E LN +IRA + LL L+TYFT G +E+RAWTIP G T
Sbjct: 241 ESEIAELDEAEKAEFLEDLGMEEAGLNRVIRAGYELLGLQTYFTAGVQEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFI+A +SY DF+ + GEQG K AGK+R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFQRGFIKAEVVSYSDFVEFSGEQGAKEAGKLRLEGKDYIVKDGDVIHFK 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|383935159|ref|ZP_09988597.1| GTP-dependent nucleic acid-binding protein engD [Rheinheimera
nanhaiensis E407-8]
gi|383703924|dbj|GAB58688.1| GTP-dependent nucleic acid-binding protein engD [Rheinheimera
nanhaiensis E407-8]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF DD I H++G+I+
Sbjct: 61 QRVLPTTMEFVDIAGLVKGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I EL+LSD+ E+ I + +KK ++ + + +L+++ +L + + +R
Sbjct: 121 PADDIDTINMELVLSDMDSAERAILRVSKKAKGGDKDAKAEMAVLEKVKAHLEQGLTLRQ 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I ++N LTIKP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LELDKEEKALIAYMNFLTIKPTMYIANVTEDGFENNPYLDIVQAIADKEGAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K F+ ++GL+E LN +IR +SLL+L TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDDEKAEFMADMGLEEPGLNRVIRGGYSLLNLHTYFTAGVKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA + Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVGYDDFVQYNGEAGAKEAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374620519|ref|ZP_09693053.1| GTP-binding protein YchF [gamma proteobacterium HIMB55]
gi|374303746|gb|EHQ57930.1| GTP-binding protein YchF [gamma proteobacterium HIMB55]
Length = 364
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 264/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ VPD R + +V
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGVVSVPDPRQDAIQALVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D + H++ +I+
Sbjct: 61 ERCIPATMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDPNVIHVANQID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLK-RIIFNLNKSIPIR 179
P+ D E I TEL L+DL EK + + + ++ ++ LL+ +++ +LN+++P+R
Sbjct: 121 PLADIETINTELALADLESCEKQLQRVIRTAKSGDKTAVATKALLEDKLLPHLNEALPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L+ E +K ++LLT KP +++ANV E+GF++N LD +K +A +N ++ IC K
Sbjct: 181 ALDLDENEQALVKMMHLLTTKPTMYIANVAEDGFEDNPHLDAVKQFAEAENAGVVAICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EIS+L + +K FL ++G++E+ L+ IRA ++LL+L+TYFT G KE+RAWT+ G
Sbjct: 241 LESEISELEDDEKLEFLADMGMEESGLDRTIRAGYALLNLQTYFTAGPKEVRAWTVKVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG+IHTD ++GFIRA ++Y DF+ KGE G K AGK R EGK Y V DGD+++F
Sbjct: 301 TAPEAAGVIHTDFQKGFIRAEVVAYNDFISLKGESGAKEAGKWRLEGKDYTVADGDVIHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|58583223|ref|YP_202239.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84625059|ref|YP_452431.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188575473|ref|YP_001912402.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|58427817|gb|AAW76854.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368999|dbj|BAE70157.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519925|gb|ACD57870.1| GTP-binding protein YchF [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLAGIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF +D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFDNDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKSGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDDEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHALAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVRAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|358011963|ref|ZP_09143773.1| GTP-binding protein YchF [Acinetobacter sp. P8-3-8]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAITRLAKSAKSGDKEALATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ LG++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEALGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|332289776|ref|YP_004420628.1| GTP-dependent nucleic acid-binding protein EngD [Gallibacterium
anatis UMN179]
gi|330432672|gb|AEC17731.1| GTP-dependent nucleic acid-binding protein EngD [Gallibacterium
anatis UMN179]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GAS GEGLGNKFLA+IRET+ + HV+RCF+++ I H+SG+I+
Sbjct: 61 QRVLPTTMEFVDIAGLVKGASNGEGLGNKFLANIRETDAIGHVVRCFENNDIVHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL EK I + K+ ++ + L ++++ + L + +R
Sbjct: 121 PADDIEVINTELALADLESCEKAILRLQKRAKGGDKEAKFELSVMEKCLPVLENAGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 IGLDAEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELEDDEKIEFLQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA ISY DF+ YKGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVISYDDFVQYKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|384418020|ref|YP_005627380.1| GTP-binding protein YchF [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460934|gb|AEQ95213.1| GTP-binding protein YchF [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF +D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFDNDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLHAALADGKSGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L++EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDDEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHALAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVRAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|209694366|ref|YP_002262294.1| GTP-dependent nucleic acid-binding protein EngD [Aliivibrio
salmonicida LFI1238]
gi|208008317|emb|CAQ78469.1| GTP-dependent nucleic acid-binding protein EngD [Aliivibrio
salmonicida LFI1238]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDVLAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIIHVAGKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E+I EL L+DL E+ I ++ KK ++ + + +L++++ + R
Sbjct: 121 PIEDIEIINLELALADLDSCERAILRQAKKAKGGDQTAKFEISVLEKLLPVFTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE+ ++ +LN LT+KP +++ANV E+GF+NN LD ++ YA +N ++ +CA +
Sbjct: 181 VELSKEEVAAVSYLNFLTLKPTMYIANVAEDGFENNPFLDLVRDYATAENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L++ D++ F ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDDEDREEFFADMGIEEPGLNRVIRSGYDLLALQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y +F+ + GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDNFIEFSGESGAKEAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408822211|ref|ZP_11207101.1| GTP-binding protein YchF [Pseudomonas geniculata N1]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLGELAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSDGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++EE ++ L LLT+KP++++ANV E+GF+NN L+ ++ +A + ++ + A +
Sbjct: 181 VGLDDEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLEAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325914242|ref|ZP_08176592.1| GTP-binding protein YchF [Xanthomonas vesicatoria ATCC 35937]
gi|325539497|gb|EGD11143.1| GTP-binding protein YchF [Xanthomonas vesicatoria ATCC 35937]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKSGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRAHAATEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTVRAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|206581061|ref|YP_002237899.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella
pneumoniae 342]
gi|288934812|ref|YP_003438871.1| GTP-binding protein YchF [Klebsiella variicola At-22]
gi|290508955|ref|ZP_06548326.1| GTP-binding protein YchF [Klebsiella sp. 1_1_55]
gi|206570119|gb|ACI11895.1| GTP-binding protein EngD [Klebsiella pneumoniae 342]
gi|288889521|gb|ADC57839.1| GTP-binding protein YchF [Klebsiella variicola At-22]
gi|289778349|gb|EFD86346.1| GTP-binding protein YchF [Klebsiella sp. 1_1_55]
Length = 364
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRS 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|456738075|gb|EMF62752.1| GTP-binding and nucleic acid-binding protein YchF [Stenotrophomonas
maltophilia EPM1]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAGIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSDGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN L+ ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLEAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLTDLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254515309|ref|ZP_05127370.1| GTP-binding protein YchF [gamma proteobacterium NOR5-3]
gi|219677552|gb|EED33917.1| GTP-binding protein YchF [gamma proteobacterium NOR5-3]
Length = 364
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/364 (50%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AEN+PFCTIEPN G++ VPD R ++ +VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRAGIDAENFPFCTIEPNAGVVPVPDPRQSKISELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ I+
Sbjct: 61 QKEIATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVANAID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLK-RIIFNLNKSIPIR 179
P D E+I TEL LSDL EK + K + ++ SI + LL+ +++ +LN++ P+R
Sbjct: 121 PAADIEIINTELALSDLDSCEKQLSKVTRTAKGGDKESIAMKALLENKLLPHLNEAKPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L++ E +K L LLT KP +++ANV E+G + N +D ++ A +N +++IC K
Sbjct: 181 GLTLDDNEKALVKSLFLLTSKPTLYIANVDEDGLEGNAHVDVVRAIAAEENAELVVICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI +L + ++ FL ++G++E LN +IRA + LL+L+TYFT G+KE+RAWT+ G
Sbjct: 241 LESEIIELEDDERAEFLADMGMEEPGLNRVIRAGYQLLNLQTYFTAGEKEVRAWTVKVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG+IHTD ++GFIRA I Y+DF+ YKGEQG K+AG+ R EGK+Y+V+DGD+++F
Sbjct: 301 TAPEAAGVIHTDFQKGFIRAEVIGYEDFITYKGEQGAKDAGRWRLEGKEYVVQDGDVVHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|226953006|ref|ZP_03823470.1| translation-associated GTPase [Acinetobacter sp. ATCC 27244]
gi|294650594|ref|ZP_06727951.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
haemolyticus ATCC 19194]
gi|226836327|gb|EEH68710.1| translation-associated GTPase [Acinetobacter sp. ATCC 27244]
gi|292823591|gb|EFF82437.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
haemolyticus ATCC 19194]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ +I L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKEAIATKAALEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECISYDDFIQYNGENGAKEAGKWRLEGKTYVVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|222149342|ref|YP_002550299.1| GTP-dependent nucleic acid-binding protein EngD [Agrobacterium
vitis S4]
gi|221736326|gb|ACM37289.1| GTP-binding protein [Agrobacterium vitis S4]
Length = 367
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN G + VPD R++ L +
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRMQTLATVAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ LL ++ + L + P R
Sbjct: 121 DPVGDAETIETELMLADLESLERRTEQTRKRAASKDKESMTLLPVMDGALKLLQEGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ SL+ EE +K LNLLT P+++V NV E + N ++ A Q +II
Sbjct: 181 LLLASLDAEEREVLKSLNLLTSHPVLYVCNVAEADAVTGNAHTKAVEEMAKAQGAETVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIEAEVAQLPDEEAVEFLSALGLEEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI+Y D++ YKGE G K AGK R EGK+Y+V DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIAYDDYITYKGEVGAKEAGKGRDEGKEYVVHDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|383190256|ref|YP_005200384.1| GTP-binding protein YchF [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588514|gb|AEX52244.1| GTP-binding protein YchF [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDVVRKIADAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|190572921|ref|YP_001970766.1| GTP-dependent nucleic acid-binding protein EngD [Stenotrophomonas
maltophilia K279a]
gi|424667181|ref|ZP_18104206.1| GTP-dependent nucleic acid-binding protein engD [Stenotrophomonas
maltophilia Ab55555]
gi|190010843|emb|CAQ44452.1| putative ATP/GTP-binding protein [Stenotrophomonas maltophilia
K279a]
gi|401069316|gb|EJP77838.1| GTP-dependent nucleic acid-binding protein engD [Stenotrophomonas
maltophilia Ab55555]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAGIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSDGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN L+ ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLEAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|420240816|ref|ZP_14745007.1| GTP-binding protein YchF [Rhizobium sp. CF080]
gi|398074755|gb|EJL65892.1| GTP-binding protein YchF [Rhizobium sp. CF080]
Length = 367
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/366 (53%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQKLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+DL LE+ +++ K+ K++ S+ L ++ +I LN P R
Sbjct: 121 NPVSDADTIETELMLADLESLERRVEQTRKRAASKDKDSMAQLPVMDAVIKLLNDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ SL EE+ +K LNLLT P+++V NV E + N + + + A Q +II
Sbjct: 181 LLLKSLAPEEIEILKGLNLLTSHPVLYVCNVAEADASTGNQHTEAVAVMAKEQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPEEEAKEFLSALGLEEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI+Y D++ +KGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIAYDDYINFKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|295095630|emb|CBK84720.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 364
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 268/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDQDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNL 364
>gi|145298186|ref|YP_001141027.1| GTPase [Aeromonas salmonicida subsp. salmonicida A449]
gi|418361602|ref|ZP_12962254.1| GTP-binding protein YchF [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850958|gb|ABO89279.1| predicted GTPase [Aeromonas salmonicida subsp. salmonicida A449]
gi|356687188|gb|EHI51773.1| GTP-binding protein YchF [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF DD I H++G+++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I +++K+ ++ + ++ L++I L IR
Sbjct: 121 PADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKLEVETLEKIRVALENGQMIRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ +EL ++ LN LT+KP +++ANV E+GF NN LD+++ A +N ++++C +
Sbjct: 181 MKLDKDELEAVSHLNFLTLKPTMYIANVAEDGFDNNPYLDKVREIAAAENAVVVVVCCAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D+ F+ +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDEDRAEFMADLGIEEPGLNRVIRSGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD+LNFL
Sbjct: 301 TPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|294666033|ref|ZP_06731295.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292604225|gb|EFF47614.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL + K +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVGKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDSFLTDLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|401674985|ref|ZP_10806980.1| GTP-binding protein YchF [Enterobacter sp. SST3]
gi|419956803|ref|ZP_14472869.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae GS1]
gi|388606961|gb|EIM36165.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae GS1]
gi|400217750|gb|EJO48641.1| GTP-binding protein YchF [Enterobacter sp. SST3]
Length = 364
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 268/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|365970941|ref|YP_004952502.1| GTP-dependent nucleic acid-binding protein engD [Enterobacter
cloacae EcWSU1]
gi|365749854|gb|AEW74081.1| GTP-dependent nucleic acid-binding protein engD [Enterobacter
cloacae EcWSU1]
Length = 364
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|399543895|ref|YP_006557203.1| GTP-dependent nucleic acid-binding protein engD [Marinobacter sp.
BSs20148]
gi|399159227|gb|AFP29790.1| GTP-dependent nucleic acid-binding protein engD [Marinobacter sp.
BSs20148]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T + HV+RCF D + H+S +I+
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTEAIAHVVRCFDDSNVIHVSNKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+D+ +EK I + + ++ + L + +R++ LN+ P+R
Sbjct: 121 PADDIEVINTELALADMDTVEKAIRRVQRIAKGGDKEAKAQLDIFERLLPVLNEGKPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M LN +EL+ I+ L LLTIKP +++ANV E+GF+NN LD ++ A +N ++ IC K+
Sbjct: 181 MGLNKDELLLIRELCLLTIKPTMYIANVAEDGFENNPYLDTVREIAAAENAVVVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FLD +G+ E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDDEKSMFLDEMGMGEPGLDRVIRAGYGLLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD +RGFIRA I Y+DF+ +KGE G K+AGK R EGK+Y+V++GD+++F
Sbjct: 301 APQAAAVIHTDFERGFIRAEVIGYEDFIQFKGEAGAKDAGKWRLEGKEYIVKNGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386717195|ref|YP_006183521.1| GTP-binding and nucleic acid-binding protein YchF [Stenotrophomonas
maltophilia D457]
gi|384076757|emb|CCH11342.1| GTP-binding and nucleic acid-binding protein YchF [Stenotrophomonas
maltophilia D457]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAGIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++G+++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L++ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSEGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF NN L+ ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFDNNPHLEAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|384258178|ref|YP_005402112.1| GTP-binding protein YchF [Rahnella aquatilis HX2]
gi|380754154|gb|AFE58545.1| GTP-binding protein YchF [Rahnella aquatilis HX2]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + K+ ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLTEEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDVVRKIADAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDDADREEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
F++
Sbjct: 361 FSV 363
>gi|126665171|ref|ZP_01736154.1| translation-associated GTPase [Marinobacter sp. ELB17]
gi|126630541|gb|EBA01156.1| translation-associated GTPase [Marinobacter sp. ELB17]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IR+T + HV+RCF D + H+S +++
Sbjct: 61 QRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTEAIAHVVRCFDDSNVIHVSNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+D+ +EK I + + ++ + L + +R++ LN+ P+R
Sbjct: 121 PADDIEVINTELALADMDTVEKAIRRVQRIAKGGDKEAKAQLDIFERLLPVLNEGQPVRG 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M LN +EL+ I+ L LLTIKP +++ANV E+GF+NN LD ++ A +N ++ IC K+
Sbjct: 181 MGLNKDELLLIRELCLLTIKPTMYIANVAEDGFENNPYLDTVREIAAAENAVVVPICNKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L + +K FLD +G+ E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELEDDEKSMFLDEMGMGEPGLDRVIRAGYGLLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD +RGFIRA I Y+DF+ +KGE G K+AGK R EGK+Y+V++GD+++F
Sbjct: 301 APQAAAVIHTDFERGFIRAEVIGYEDFIQFKGEAGAKDAGKWRLEGKEYIVKNGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|423124400|ref|ZP_17112079.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5250]
gi|376399845|gb|EHT12458.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5250]
Length = 364
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEP+ G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPSTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|325293591|ref|YP_004279455.1| GTP-dependent nucleic acid-binding protein engD [Agrobacterium sp.
H13-3]
gi|418407217|ref|ZP_12980535.1| GTP-binding protein YchF [Agrobacterium tumefaciens 5A]
gi|325061444|gb|ADY65135.1| GTP-dependent nucleic acid-binding protein engD [Agrobacterium sp.
H13-3]
gi|358006361|gb|EHJ98685.1| GTP-binding protein YchF [Agrobacterium tumefaciens 5A]
Length = 367
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN P R
Sbjct: 121 NPVGDADTIETELMLADLESLERRVEQTRKRATSKDKESLAQLPVMEAVIALLNDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L +EE+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 LLLKTLADEEIEILKGLNLLTSHPVLYVCNVSEADASTGNEHTAAVAEMAKQQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPADEAEEFLSALGLTEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI+Y D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIAYDDYIAYKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|221135307|ref|ZP_03561610.1| translation-associated GTPase [Glaciecola sp. HTCC2999]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL + IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDAIAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H+SG ++
Sbjct: 61 QKIIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVSGAVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL EK + + K+ + + +K+L++I +L++ +R
Sbjct: 121 PADDIEIINTELALADLETTEKALLRVGKRAKGGDADAKFEMKVLEKIKPHLDEGEMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+SL EEL +I ++N LTIKP +++ANV E+GF+NN LLD++K A +N ++ +CA +
Sbjct: 181 VSLEKEELAAISYMNYLTIKPTMYIANVAEDGFENNPLLDKVKAIAAAENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L++ DK FLD +GL+E LN +IR+ + LL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESEISELDDEDKAEFLDEMGLEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y D++ +GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVGYDDYIAGRGEAGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|423120780|ref|ZP_17108464.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5246]
gi|376395410|gb|EHT08056.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5246]
Length = 364
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|33152132|ref|NP_873485.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus
ducreyi 35000HP]
gi|47605652|sp|Q7VMI2.3|ENGD_HAEDU RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|33148354|gb|AAP95874.1| putative GTP-binding protein [Haemophilus ducreyi 35000HP]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I TEL L+DL E+ I + K+ ++ + L +L++I+ L + IR
Sbjct: 121 PADDIETINTELALADLDSCERAIQRLQKRAKSGDKDAKFELSILEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ +EL +IK N LT+KP +++ANV E+ F+NN LD+++ A + ++ +CA +
Sbjct: 181 VALDKDELHAIKGYNFLTLKPTMYIANVNEDSFENNPYLDRVRQLAEQEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELEDEEKVDFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|156973543|ref|YP_001444450.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio harveyi
ATCC BAA-1116]
gi|156525137|gb|ABU70223.1| hypothetical protein VIBHAR_01244 [Vibrio harveyi ATCC BAA-1116]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VALAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|262372326|ref|ZP_06065605.1| translation-associated GTPase [Acinetobacter junii SH205]
gi|262312351|gb|EEY93436.1| translation-associated GTPase [Acinetobacter junii SH205]
Length = 367
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 5 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 65 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ +I L++I L++ P R
Sbjct: 125 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKDAIATKAALEKIQPLLDEGKPARA 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 185 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 245 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 305 APQAAGVIHTDFEKGFIRAECISYDDFIQYNGENGAKEAGKWRLEGKTYVVQDGDVLHFR 364
Query: 361 FNI 363
FN+
Sbjct: 365 FNV 367
>gi|392420012|ref|YP_006456616.1| GTP-binding protein YchF [Pseudomonas stutzeri CCUG 29243]
gi|390982200|gb|AFM32193.1| GTP-binding protein YchF [Pseudomonas stutzeri CCUG 29243]
Length = 366
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFQDDNVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKEAVAQKALLEKLIPHFTEGKPART 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L L+ +E ++ +LLT KP++++ANV E+GF++N LLD ++ A + P++ +C
Sbjct: 181 LLRHLSTDEKQVVRGFHLLTSKPVMYIANVAEDGFEDNPLLDIVRAIADAEGAPVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|410622132|ref|ZP_11332971.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410158530|dbj|GAC28345.1| GTP-dependent nucleic acid-binding protein engD [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD+RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDERLDALAKIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL LSDL EK I + K+ + + LK+L++++ LN+ +R
Sbjct: 121 PQEDIDIINTELALSDLETAEKAIFRVGKRAKSGDSDAKFELKVLEKLLPCLNEGQLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I ++N LT+KP +++ANV E+GF+NN LD+++ A + ++ ICA +
Sbjct: 181 IELSKEEHAVIAYMNFLTLKPTMYIANVSEDGFENNPHLDKVRAIAEAEGATVVSICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L+ +K F+ +LGL E LN +IRA +SLL L TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELDEEEKAEFMADLGLTEPGLNRVIRAGYSLLTLETYFTAGVKEVRAWTYPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AG IHTD ++GFIRA I Y DF+ KGE G K+AGK R EGK Y++ DGD+++F
Sbjct: 301 APQGAGKIHTDFEKGFIRAEIIGYDDFVSCKGEAGAKDAGKWRLEGKDYVIRDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|345299609|ref|YP_004828967.1| GTP-binding protein YchF [Enterobacter asburiae LF7a]
gi|345093546|gb|AEN65182.1| GTP-binding protein YchF [Enterobacter asburiae LF7a]
Length = 364
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELTALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAGEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|116253221|ref|YP_769059.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium
leguminosarum bv. viciae 3841]
gi|115257869|emb|CAK08967.1| putative GTP-dependent nucleic acid-binding protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 371
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 258/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 5 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 64
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 65 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 124
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 125 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKDSVAMLPIMEGSLKLLNEGKPVR 184
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE++ +K LNLLT P+++V NV E + N D + I A Q ++I
Sbjct: 185 TLLSTLDAEEIVILKSLNLLTSHPVLYVCNVAEGDASTGNEFTDAVAIMAKEQGAETVVI 244
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 245 SAAIESEVAQLPDEEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 304
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 305 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 364
Query: 357 LNFLFN 362
++F FN
Sbjct: 365 IHFRFN 370
>gi|348029564|ref|YP_004872250.1| translation-associated GTPase [Glaciecola nitratireducens FR1064]
gi|347946907|gb|AEP30257.1| translation-associated GTPase [Glaciecola nitratireducens FR1064]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD+RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDERLTALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G+++
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIIHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL EK + + K+ + + LK+L++++ +LN+ +R
Sbjct: 121 PQEDIDVINTELALSDLETAEKAMLRVGKRAKSGDSDAKFELKVLEKLLPHLNEGELLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I ++N LT+KP +++ANV E GF+ N LD+++ A + ++ +CA +
Sbjct: 181 VQLSKEEHAAIAYMNFLTLKPTMYIANVNEEGFEKNPYLDKVRAIAEAEGAIVVSVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L+ +K F+ LGL E LN +IRA +SLL L TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELDEEEKAEFMAELGLTEPGLNRVIRAGYSLLTLETYFTAGVKEVRAWTYPIGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q AG IHTD ++GFIRA I Y D++ +GE G K+AGK R EGK+Y+++DGD+++F
Sbjct: 301 APQGAGKIHTDFEKGFIRAEIIGYDDYIACRGESGAKDAGKWRLEGKEYILKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|28805723|dbj|BAC59000.1| GTP-binding protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 383
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 141 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGSART 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 201 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVREFAAKENNVVVPVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 261 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLSLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y+DF+ Y GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 321 APKAAAKIHTDFEKGFIRAEVVGYEDFIQYNGENGAKDAGKWRLEGKDYIVKDGDVVHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|90408738|ref|ZP_01216885.1| predicted GTPase, probable translation factor [Psychromonas sp.
CNPT3]
gi|90310155|gb|EAS38293.1| predicted GTPase, probable translation factor [Psychromonas sp.
CNPT3]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ I H+SG+I+
Sbjct: 61 QRVLPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL ++ + + KK ++ + L +L++I +L +R
Sbjct: 121 PRDDIEIINTELALADLESCDRSLLRVFKKAKGGDKDAKIELPVLEKIKAHLENDGMVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ LN +EL S+ +LN LT KP +++ANV E+GF+NN LD ++ A +N ++ +CA +
Sbjct: 181 LGLNEDELASVSYLNFLTGKPTMYIANVAEDGFENNPYLDIVREIAAAENAVVVPVCASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +IS+L+ DK FL+ +G KET LN LI + + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESDISELDEEDKAEFLEAIGQKETGLNRLIYSGYQLLHLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I + DF+ ++GE G K AGK R EGKKY+ +DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEIIGFDDFVEFQGEAGAKEAGKWRLEGKKYITQDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|418940703|ref|ZP_13494057.1| GTP-binding protein YchF [Rhizobium sp. PDO1-076]
gi|375052527|gb|EHS48940.1| GTP-binding protein YchF [Rhizobium sp. PDO1-076]
Length = 367
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN G + VPD R++ L +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRMQKLASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G+I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN+ P R
Sbjct: 121 NPVGDAETIETELMLADLESLERRVEQTRKRAASKDKESLAQLPVMEAVIKLLNEGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
++ +L +E+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 ILLKTLAADEIEVLKGLNLLTSHPVLYVCNVAESDAVDGNAHTKAVAEMAKAQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPDEESKEFLSALGLEEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IHTD +RGFIRA TIS+ D++ +KGE G K AGK R EGK+Y+V DGD+
Sbjct: 301 RGTKAPQAAGVIHTDFERGFIRAFTISFDDYIAFKGEVGAKEAGKGRDEGKEYVVHDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|326796208|ref|YP_004314028.1| GTP-binding protein YchF [Marinomonas mediterranea MMB-1]
gi|326546972|gb|ADZ92192.1| GTP-binding protein YchF [Marinomonas mediterranea MMB-1]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGIVAMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ ++N
Sbjct: 61 ERVLATTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVANQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI ELI +DL ++K I + K N+ +I L+ I +L P+R
Sbjct: 121 PTADIEVINLELIFADLESIDKQIFRTAKTAKSGNKDAIAHKAFLESIKQHLEDGKPVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M +++ +K L+LLT KP +++ANV E+GF+NN L+ + A ++ ++ IC +L
Sbjct: 181 MEFTDDQAKEVKQLHLLTTKPTMYIANVSEDGFENNPHLEVVTKIAASEGAMVVPICNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS+L+ + + FLD +G+ E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEISELDAEEMQDFLDEMGMSEPGLDRVIRAGYELLGLQTYFTAGVKEVRAWTVKQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG+IHTD ++GFIRA +SY DF+ Y+GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGVIHTDFEKGFIRAEVVSYDDFIQYQGENGAKDAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|289663464|ref|ZP_06485045.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. vasculorum NCPPB 702]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVLYIANVLEDGFENNPHLDAVRAHALIEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLEEPGLNRVIRAAYTLLGLQTYFTAGVKEVRAWTVRAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGEAGARDAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|402840375|ref|ZP_10888839.1| GTP-binding protein YchF [Klebsiella sp. OBRC7]
gi|423103545|ref|ZP_17091247.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5242]
gi|376385187|gb|EHS97908.1| GTP-dependent nucleic acid-binding protein engD [Klebsiella oxytoca
10-5242]
gi|402285592|gb|EJU34073.1| GTP-binding protein YchF [Klebsiella sp. OBRC7]
Length = 364
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRS 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|354724238|ref|ZP_09038453.1| GTP-binding protein YchF [Enterobacter mori LMG 25706]
gi|401764078|ref|YP_006579085.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400175612|gb|AFP70461.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 364
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|424795618|ref|ZP_18221444.1| GTP-binding protein [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795383|gb|EKU24091.1| GTP-binding protein [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 363
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLGELARIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PISDIDTIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NNL LD ++ A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNLHLDAVRARAATEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDTFLADLGLAEPGLNRVIRAAYALLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G + AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYADFIKYKGEAGAREAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|383813506|ref|ZP_09968931.1| GTP-binding protein YchF [Serratia sp. M24T3]
gi|383297651|gb|EIC85960.1| GTP-binding protein YchF [Serratia sp. M24T3]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L+ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLSEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRVVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L ++ +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLEQAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ +I++L+ LT+KP +++ANV E+G++NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSEEDKAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVRAIADAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + D+ F+ LGL+E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI + DF+ +KGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIGFDDFVSFKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|161511060|ref|NP_797116.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio
parahaemolyticus RIMD 2210633]
gi|417320528|ref|ZP_12107074.1| GTP-binding protein YchF [Vibrio parahaemolyticus 10329]
gi|433657009|ref|YP_007274388.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
parahaemolyticus BB22OP]
gi|328473491|gb|EGF44339.1| GTP-binding protein YchF [Vibrio parahaemolyticus 10329]
gi|432507697|gb|AGB09214.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
parahaemolyticus BB22OP]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGSART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VELSKEELAAVGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y+DF+ Y GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYEDFIQYNGENGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|78484740|ref|YP_390665.1| GTP-dependent nucleic acid-binding protein EngD [Thiomicrospira
crunogena XCL-2]
gi|78363026|gb|ABB40991.1| GTP-binding protein, HSR1-related [Thiomicrospira crunogena XCL-2]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALT I + NYPFCTIEPN+G++ VPD R + L +IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTNAGIESANYPFCTIEPNVGVVPVPDPREQALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I A + +DIAGLV GASKGEGLGNKFLA+IRET+ ++ V+RCF++D I H++G+++
Sbjct: 61 ERILSATVDFMDIAGLVEGASKGEGLGNKFLANIRETDAIVQVVRCFENDDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I ELIL+D+ LEK + K + ++ ++ L ++++ + +RL
Sbjct: 121 PLSDIEIINMELILADMESLEKAVQKVIRVAKSGDKEALAKQALYEKVLKEVEGGKLVRL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++E ++ L+LLTIKP++++ANV E+GF+NN LD ++ A Q ++ I A++
Sbjct: 181 VELTDDERKMLQDLHLLTIKPMMYIANVNEDGFENNPYLDAVQKVAEEQGAIVVPISAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EE++++L+ DK FL +G +E LN LIRA++ LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEQVAELDEEDKAEFLAEMGQEEPGLNRLIRAAYELLGLQTYFTAGVKEVRAWTVKKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +Y DF+ YKG+ G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVTAYDDFIEYKGDAGAKAAGKQRLEGKEYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|322513908|ref|ZP_08066985.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
ureae ATCC 25976]
gi|322120243|gb|EFX92196.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
ureae ATCC 25976]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +EL +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 VDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I Y+DF+ KG+ G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIGYQDFIDNKGDTGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|375264707|ref|YP_005022150.1| GTP-binding protein YchF [Vibrio sp. EJY3]
gi|369840031|gb|AEX21175.1| GTP-binding protein YchF [Vibrio sp. EJY3]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGSART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VELAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIEFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|350530477|ref|ZP_08909418.1| GTP-binding protein YchF [Vibrio rotiferianus DAT722]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 IELTKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|313107335|ref|ZP_07793530.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386063871|ref|YP_005979175.1| translation-associated GTPase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880032|gb|EFQ38626.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|348032430|dbj|BAK87790.1| translation-associated GTPase [Pseudomonas aeruginosa NCGM2.S1]
Length = 366
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L EE ++ +LLT KP++++ANV ENGF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGEEEKRLVRSFHLLTSKPVMYIANVAENGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAGYGLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGEQG K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEQGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|406979970|gb|EKE01652.1| hypothetical protein ACD_21C00082G0002 [uncultured bacterium]
Length = 362
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 261/363 (71%), Gaps = 1/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKST+FNALTK ++SA NYPFCTI+PN+G++ VPD RLK L I +
Sbjct: 1 MGFKCGIVGLPNVGKSTVFNALTKAQVSAANYPFCTIDPNVGVVPVPDARLKKLAVIADS 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KKI P +++ VDIAGLV GA+KGEGLGN+FLA+IRET + HV+RCF++ + H++G+++
Sbjct: 61 KKIIPTVVEFVDIAGLVKGAAKGEGLGNQFLANIRETQAIAHVVRCFENPDVVHVAGKVH 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I TELIL+DL ++K I K K ++ + L L++I NLN+ IP+R
Sbjct: 121 PQTDIEIINTELILADLETVDKAIHKMGKGVKSGDKQAAADLATLEKIKENLNQGIPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ ++ + ++ L+LLTIKP+++VANV E GFKNN LD ++ A +N ++ ICA +
Sbjct: 181 IHFDDNPQV-LQHLHLLTIKPVLYVANVDEAGFKNNPYLDMVEAIAKQENAVVVPICATI 239
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L DK+ FL +LGL E+ L+ +I A +LL L+T+FT+G KE AWT+ NG
Sbjct: 240 ESEIAQLAEEDKEAFLTDLGLAESGLDRVIHAGHALLGLQTFFTIGPKEAHAWTVENGAR 299
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD + GFI A + D++ Y GE G ++AGK+R EGK Y+++DGD+++F
Sbjct: 300 APQAAGVIHTDFEHGFICAEVVGCDDYIKYNGEAGARDAGKLRLEGKNYVMQDGDVVHFR 359
Query: 361 FNI 363
FN+
Sbjct: 360 FNV 362
>gi|320538908|ref|ZP_08038584.1| putative GTP-binding protein [Serratia symbiotica str. Tucson]
gi|320031068|gb|EFW13071.1| putative GTP-binding protein [Serratia symbiotica str. Tucson]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E+ +I++L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLSMEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDAVRKIAKAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMAELGLEEPGLNRVIRAGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI+Y+DF+ YKGEQG K AGK+RSEGK Y+V+DG+++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRSEGKDYIVKDGNVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|237731791|ref|ZP_04562272.1| translation-associated GTPase [Citrobacter sp. 30_2]
gi|365107383|ref|ZP_09335717.1| GTP-dependent nucleic acid-binding protein engD [Citrobacter
freundii 4_7_47CFAA]
gi|395229713|ref|ZP_10408024.1| translation-associated GTPase [Citrobacter sp. A1]
gi|421847457|ref|ZP_16280595.1| GTP-binding protein YchF [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|424729819|ref|ZP_18158419.1| hypothetical protein B397_1400 [Citrobacter sp. L17]
gi|226907330|gb|EEH93248.1| translation-associated GTPase [Citrobacter sp. 30_2]
gi|363641492|gb|EHL80884.1| GTP-dependent nucleic acid-binding protein engD [Citrobacter
freundii 4_7_47CFAA]
gi|394716928|gb|EJF22658.1| translation-associated GTPase [Citrobacter sp. A1]
gi|411771253|gb|EKS54960.1| GTP-binding protein YchF [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422895774|gb|EKU35561.1| hypothetical protein B397_1400 [Citrobacter sp. L17]
gi|455645779|gb|EMF24822.1| GTP-binding protein YchF [Citrobacter freundii GTC 09479]
Length = 364
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/364 (52%), Positives = 268/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKTLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ +GL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VEADIAELDDADREEFMAEMGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGDI+NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDIMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|388603017|ref|ZP_10161413.1| GTP-binding protein YchF [Vibrio campbellii DS40M4]
gi|424030751|ref|ZP_17770224.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-01]
gi|424042626|ref|ZP_17780319.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-02]
gi|408881032|gb|EKM19943.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-01]
gi|408887927|gb|EKM26416.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-02]
Length = 363
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VDLAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261340159|ref|ZP_05968017.1| GTP-binding protein YchF [Enterobacter cancerogenus ATCC 35316]
gi|288317674|gb|EFC56612.1| GTP-binding protein YchF [Enterobacter cancerogenus ATCC 35316]
Length = 364
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 266/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTEEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|118603029|ref|YP_904244.1| GTP-binding protein YchF [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567968|gb|ABL02773.1| GTP-binding protein YchF [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 363
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ + + NYPFCTIEPN+GI+ + D RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQSGVGSANYPFCTIEPNVGIVPINDSRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI +K VDIAGLV GASKGEGLGNKFL +IRET+ +IHV+R F DD I H+S +I+
Sbjct: 61 QKILSTTMKFVDIAGLVKGASKGEGLGNKFLTNIRETDAIIHVVRAFDDDDIIHVSKKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+D +LE K KK + L LL +I+ L +R
Sbjct: 121 PLDDIEIINTELILADFDMLENLYQKALKKIKSGQKDGAPLKNLLTKILSVLETGNSVRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+S + EEL +K LLTIKP+++VANV ENGF +N L ++ +AH++N + ICAK
Sbjct: 181 LSFDEEELKLLKGFQLLTIKPVLYVANVNENGFIDNAYLKIIEKFAHSENTQTVTICAKT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++LN +K+ FL +G ++ L+ LI+A + LL L+TYFT G +E+RAWTI G +
Sbjct: 241 EAEIAELNKDEKQEFLSEMGQSKSGLDKLIKAGYQLLGLQTYFTAGVQEVRAWTINTGDS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
QAAG IH D ++GFIRA T+S+ DF+ + GE+G K+AGK+RSEGK+Y+V+DGD+++FL
Sbjct: 301 VSQAAGKIHGDFEKGFIRAQTVSFSDFIEFGGEKGAKDAGKLRSEGKEYIVQDGDVIHFL 360
Query: 361 FNI 363
F++
Sbjct: 361 FSV 363
>gi|152987964|ref|YP_001350654.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PA7]
gi|452877563|ref|ZP_21954839.1| GTP-binding protein YchF [Pseudomonas aeruginosa VRFPA01]
gi|150963122|gb|ABR85147.1| GTP-binding protein YchF [Pseudomonas aeruginosa PA7]
gi|452185692|gb|EME12710.1| GTP-binding protein YchF [Pseudomonas aeruginosa VRFPA01]
Length = 366
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 265/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K ++ ++ ++ LL+++I + + P R
Sbjct: 121 PRRDIEIIDLELIFADLDSCEKQLQKVSRNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L +EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGDEEKRLVRSFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAGYGLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGEQG K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEQGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|159185112|ref|NP_355190.2| GTP-binding protein [Agrobacterium fabrum str. C58]
gi|159140383|gb|AAK87975.2| GTP-binding protein [Agrobacterium fabrum str. C58]
Length = 367
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN P R
Sbjct: 121 NPVGDAETIETELMLADLESLERRVEQTRKRATSKDKESLAQLPVMEAVIALLNDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L +EE+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 LLLKTLADEEIEILKGLNLLTSHPVLYVCNVSEADASSGNEHTAAVAEMAKQQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPADEAEEFLSALGLNEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI + D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIGFDDYIAYKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|339477943|ref|YP_004706763.1| translation-associated GTPase, YchF family [Candidatus Moranella
endobia PCIT]
gi|338172494|gb|AEI74895.1| translation-associated GTPase, YchF family [Candidatus Moranella
endobia PCIT]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTI+PN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIKAANFPFCTIQPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GAS+GEGLGN+FL HIR T + HV+RCF +D I H++G+I+
Sbjct: 61 QRIVPTTMEFVDIAGLVKGASQGEGLGNQFLNHIRTTEAIGHVVRCFTNDNIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D VI TEL LSDL + E+ I++ K + H+ L LK+ + L+ + +R
Sbjct: 121 PAEDIAVINTELALSDLEVCERAINRVQKLTKSGDNHAKLELSALKKCLLQLSNAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+N+E +I +L+ LTIKP++++ NV EN F NN ++Q++ A + ++ ICA +
Sbjct: 181 LNLSNDEKQAIDYLSFLTIKPMMYITNVNENSFDNNPYVEQVRAIAAAEESIVVTICAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I+ L + F+ + E L +IRA + LL+L+TYFTVG KE+RAWTI GTT
Sbjct: 241 ESDIAKLKTEARNTFMAGIDFVEPSLTSVIRAGYKLLNLQTYFTVGVKELRAWTISVGTT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QA+G IH D ++GFIRA TIS++DFL YKGE G K AGKIRSEGK Y+V DGD++NF+
Sbjct: 301 ALQASGKIHNDFRKGFIRAQTISFEDFLFYKGELGAKEAGKIRSEGKHYVVNDGDVMNFM 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|150397466|ref|YP_001327933.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium
medicae WSM419]
gi|150028981|gb|ABR61098.1| GTP-binding protein YchF [Sinorhizobium medicae WSM419]
Length = 367
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRRLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL LE+ D+ K+ K++ S+ L +++ + L + P+R
Sbjct: 121 HPVEDADTIETELMLADLESLERRADQTRKRATGKDKESMAQLPIMEASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ +EL ++ LNLLT P+++V NV E + N ++ A Q +II
Sbjct: 181 TLLSRLDADELRILQSLNLLTSHPVLYVCNVAESDAATGNEHTRAVEKMAQEQGAETVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPEEEAHEFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIAYGGENGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|152979078|ref|YP_001344707.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus
succinogenes 130Z]
gi|150840801|gb|ABR74772.1| GTP-binding protein YchF [Actinobacillus succinogenes 130Z]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR
Sbjct: 121 PADDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +EL +IK N LT+KP +++ANV E+GF+NN L++++ A + ++ +CA +
Sbjct: 181 AGLDKDELQAIKGYNFLTLKPTMYIANVNEDGFENNPYLERIREIAEKEGAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +LG+ E LN +IRA + LL+L+TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKTEFLQDLGIDEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTVSVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD ++GFIRA I Y+DF+ KGE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APKAAAVIHTDFEKGFIRAEVIGYQDFIDNKGEAGAKEAGKWRLEGKDYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|381195902|ref|ZP_09903244.1| GTP-binding protein YchF [Acinetobacter lwoffii WJ10621]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L +I+ L++ P R
Sbjct: 121 PLDDIATINTELALADLETVTKAVTRLAKSAKGGDKEALATKAVLDKILPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ LG++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEALGMEEPGLNVVIRAGYGLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYNDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|406039375|ref|ZP_11046730.1| GTP-binding protein YchF [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ +I +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKALLRLTKSAKGGDKDAIATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKQLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMQEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|448241770|ref|YP_007405823.1| ATPase, K+-dependent, ribosome-associated [Serratia marcescens WW4]
gi|445212134|gb|AGE17804.1| ATPase, K+-dependent, ribosome-associated [Serratia marcescens WW4]
gi|453062012|gb|EMF03007.1| GTP-binding protein YchF [Serratia marcescens VGH107]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + KK ++ + L L++ + +L + +R
Sbjct: 121 PAEDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPHLENAGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L E+ +IK+L+ LT+KP +++ANV E+GF+NN LD ++ A + ++ +CA +
Sbjct: 181 LDLTAEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDTVRKIADAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELEDEERDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|403052551|ref|ZP_10907035.1| GTP-binding protein YchF [Acinetobacter bereziniae LMG 1003]
gi|445424458|ref|ZP_21436939.1| GTP-binding protein YchF [Acinetobacter sp. WC-743]
gi|444754509|gb|ELW79123.1| GTP-binding protein YchF [Acinetobacter sp. WC-743]
Length = 363
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L +I+ L++ P R
Sbjct: 121 PLDDIATINTELALADLETVTKAVTRLAKSAKGGDKEAVATKAVLDKILPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 181 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L++ D+ FL+ LG++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLDDEDRAEFLEALGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y DF+ + GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECIAYDDFIQFNGENGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|15599868|ref|NP_253362.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PAO1]
gi|107099660|ref|ZP_01363578.1| hypothetical protein PaerPA_01000678 [Pseudomonas aeruginosa PACS2]
gi|116052818|ref|YP_793135.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893770|ref|YP_002442639.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa LESB58]
gi|254238587|ref|ZP_04931910.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|355652199|ref|ZP_09056634.1| GTP-dependent nucleic acid-binding protein engD [Pseudomonas sp.
2_1_26]
gi|386060830|ref|YP_005977352.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa M18]
gi|392986342|ref|YP_006484929.1| GTP-binding protein YchF [Pseudomonas aeruginosa DK2]
gi|416855499|ref|ZP_11911530.1| GTP-binding protein YchF [Pseudomonas aeruginosa 138244]
gi|418588023|ref|ZP_13152040.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P1]
gi|418590134|ref|ZP_13154049.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P2]
gi|419754579|ref|ZP_14280939.1| GTP-binding protein YchF [Pseudomonas aeruginosa PADK2_CF510]
gi|420141861|ref|ZP_14649500.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CIG1]
gi|421156099|ref|ZP_15615553.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 14886]
gi|421163232|ref|ZP_15621959.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 25324]
gi|421170458|ref|ZP_15628410.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 700888]
gi|421176926|ref|ZP_15634584.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CI27]
gi|421182735|ref|ZP_15640207.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa E2]
gi|421519231|ref|ZP_15965903.1| GTP-binding protein YchF [Pseudomonas aeruginosa PAO579]
gi|424944550|ref|ZP_18360313.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|451985061|ref|ZP_21933292.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
aeruginosa 18A]
gi|9950929|gb|AAG08060.1|AE004881_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115588039|gb|ABJ14054.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170518|gb|EAZ56029.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|218773998|emb|CAW29813.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|334842856|gb|EGM21455.1| GTP-binding protein YchF [Pseudomonas aeruginosa 138244]
gi|346060996|dbj|GAA20879.1| putative GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|347307136|gb|AEO77250.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa M18]
gi|354824407|gb|EHF08658.1| GTP-dependent nucleic acid-binding protein engD [Pseudomonas sp.
2_1_26]
gi|375041163|gb|EHS33876.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P1]
gi|375051085|gb|EHS43558.1| GTP-binding protein YchF [Pseudomonas aeruginosa MPAO1/P2]
gi|384398992|gb|EIE45395.1| GTP-binding protein YchF [Pseudomonas aeruginosa PADK2_CF510]
gi|392321847|gb|AFM67227.1| GTP-binding protein YchF [Pseudomonas aeruginosa DK2]
gi|403245418|gb|EJY59235.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CIG1]
gi|404346216|gb|EJZ72567.1| GTP-binding protein YchF [Pseudomonas aeruginosa PAO579]
gi|404519478|gb|EKA30230.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 14886]
gi|404523396|gb|EKA33820.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 700888]
gi|404529480|gb|EKA39516.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa ATCC 25324]
gi|404530296|gb|EKA40303.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa CI27]
gi|404541481|gb|EKA50838.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa E2]
gi|451757235|emb|CCQ85815.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
aeruginosa 18A]
gi|453042723|gb|EME90462.1| GTP-binding protein YchF [Pseudomonas aeruginosa PA21_ST175]
Length = 366
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L +EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGDEEKRLVRSFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAGYGLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGEQG K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEQGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|444428521|ref|ZP_21223845.1| GTP-binding protein YchF [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444238230|gb|ELU49847.1| GTP-binding protein YchF [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 363
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VDLAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNEYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|333893691|ref|YP_004467566.1| GTP-binding protein YchF [Alteromonas sp. SN2]
gi|332993709|gb|AEF03764.1| GTP-binding protein YchF [Alteromonas sp. SN2]
Length = 363
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G++N
Sbjct: 61 QRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D ++I TEL LSDL EK + + K+ + + LK+L++I +L++ + +R
Sbjct: 121 PQDDIDIINTELALSDLETTEKALHRVAKRAKGGDSDAKYELKVLEKIKPHLDEGLLLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I ++N+LT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA +
Sbjct: 181 LELTKEEHAAISYMNMLTLKPTMYIANVDEDGFENNPYLDKVRAIAEGENAVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + +++ F+ ++GL+E LN +IRA ++LL L+TYFT G KE+RAWT P G+T
Sbjct: 241 ESDIAELEDDEREEFMQDMGLEEPGLNRVIRAGYNLLTLQTYFTAGVKEVRAWTFPEGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA +SY F+ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVSYDHFVEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407794328|ref|ZP_11141355.1| GTP-binding protein YchF [Idiomarina xiamenensis 10-D-4]
gi|407212928|gb|EKE82789.1| GTP-binding protein YchF [Idiomarina xiamenensis 10-D-4]
Length = 363
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL+ L +IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDSRLQKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G I+
Sbjct: 61 QRVLPTTMEFVDIAGLVKGASQGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVNGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL ++K + + K+ ++ + + +L+++ L++ R
Sbjct: 121 PLDDIDTINTELALADLDSVDKALLRLAKRAKGGDKQAKAEIAVLEKVKPVLDEGKMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ ++L +I+ NLLT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA +
Sbjct: 181 VGLDKDDLATIRSYNLLTLKPTMYIANVNEDGFENNPFLDKVRELAAGENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL LG E LN +IR + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDEEKADFLAELGQSEPGLNRVIRGGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y+D++ + GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGRIHTDFEKGFIRAEVVGYQDYIEFNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|227822867|ref|YP_002826839.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium
fredii NGR234]
gi|227341868|gb|ACP26086.1| GTP-binding protein, putative [Sinorhizobium fredii NGR234]
Length = 367
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDARMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ L ++ + L + P+R
Sbjct: 121 HPVEDAETIETELMLADLESLERRTEQTRKRAVGKDKESMAQLPIMDASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L ++ EEL ++ LNLLT P+++V NV E + + N + A Q ++I
Sbjct: 181 TLLPKIDAEELRVLQGLNLLTAHPVLYVCNVAEADAAEGNEHTRAVAEMAKAQGAESVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPDDEAKEFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y DF GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDFTALGGETGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|262368446|ref|ZP_06061775.1| translation-associated GTPase [Acinetobacter johnsonii SH046]
gi|262316124|gb|EEY97162.1| translation-associated GTPase [Acinetobacter johnsonii SH046]
Length = 367
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 5 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 65 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L +I+ L++ P R
Sbjct: 125 PLDDIATINTELALADLETVTKAVTRLAKSAKGGDKEALATKAVLDKILPLLDEGKPARA 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 185 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ LG++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 245 EAEISLLEDEDRAEFLEALGMEEPGLNVVIRAGYGLLGLQTYFTAGVQEVRAWTVKVGAT 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 305 APQAAGVIHTDFEKGFIRAECVAYNDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVLHFR 364
Query: 361 FNI 363
FN+
Sbjct: 365 FNV 367
>gi|342731402|ref|YP_004777029.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio anguillarum
775]
Length = 363
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I ++ K+ ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRQAKRAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELSKEELAAVDYLNFLTLKPTMYIANVSEDGFENNPYLDAVREFAEKENNSVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L D+ FL +LG++E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEDRAEFLADLGIEEPGLNRVIRTGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA + Y DF+ Y+GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVVGYDDFIQYRGENGAKEAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422631830|ref|ZP_16697010.1| GTP-binding protein YchF [Pseudomonas syringae pv. pisi str. 1704B]
gi|330941710|gb|EGH44467.1| GTP-binding protein YchF [Pseudomonas syringae pv. pisi str. 1704B]
Length = 366
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRSAKGGDKEAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|440227380|ref|YP_007334471.1| GTP-binding protein YchF [Rhizobium tropici CIAT 899]
gi|440038891|gb|AGB71925.1| GTP-binding protein YchF [Rhizobium tropici CIAT 899]
Length = 367
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L ++ + L + P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKESMAMLPIMDASLALLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ EE +K LNLLT P+++V NV E + N + A QN ++II
Sbjct: 181 TLLSKLDAEETRILKGLNLLTSHPVLYVCNVAEGDAATGNEHTAAVAAMAKEQNSEVVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL LGL E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPDEEAKEFLSALGLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 TGTKAPQAAGVIHSDFERGFIRANTIAYDDYIAYNGETGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|15966110|ref|NP_386463.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium
meliloti 1021]
gi|334317114|ref|YP_004549733.1| GTP-binding protein YchF [Sinorhizobium meliloti AK83]
gi|384530242|ref|YP_005714330.1| GTP-binding protein YchF [Sinorhizobium meliloti BL225C]
gi|384535277|ref|YP_005719362.1| putative GTP-dependent nucleic acid-binding protein engD
[Sinorhizobium meliloti SM11]
gi|407721416|ref|YP_006841078.1| GTP-dependent nucleic acid-binding protein engD [Sinorhizobium
meliloti Rm41]
gi|433614182|ref|YP_007190980.1| GTP-binding protein YchF [Sinorhizobium meliloti GR4]
gi|15075380|emb|CAC46936.1| Putative GTP-dependent nucleic acid-binding protein EngD
[Sinorhizobium meliloti 1021]
gi|333812418|gb|AEG05087.1| GTP-binding protein YchF [Sinorhizobium meliloti BL225C]
gi|334096108|gb|AEG54119.1| GTP-binding protein YchF [Sinorhizobium meliloti AK83]
gi|336032169|gb|AEH78101.1| putative GTP-dependent nucleic acid-binding protein engD
[Sinorhizobium meliloti SM11]
gi|407319648|emb|CCM68252.1| GTP-dependent nucleic acid-binding protein engD [Sinorhizobium
meliloti Rm41]
gi|429552372|gb|AGA07381.1| GTP-binding protein YchF [Sinorhizobium meliloti GR4]
Length = 367
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL LE+ ++ K+ K++ S+ L +++ + L + P+R
Sbjct: 121 HPVEDADTIETELMLADLDSLERRAEQTRKRATGKDKESMAQLPIMEASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ +EL ++ LNLLT P+++V NV E + N ++ A Q ++I
Sbjct: 181 TLLSKLDADELRILQSLNLLTSHPVLYVCNVAESDAATGNEHTRAVEKMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPEEEAKEFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIGYGGENGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|335033850|ref|ZP_08527214.1| translation-associated GTPase [Agrobacterium sp. ATCC 31749]
gi|333794735|gb|EGL66068.1| translation-associated GTPase [Agrobacterium sp. ATCC 31749]
Length = 367
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN P R
Sbjct: 121 NPVGDAETIETELMLADLESLERRVEQTRKRATSKDKESLAQLPVMEAVIALLNDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L EE+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 LLLKTLPVEEIEILKGLNLLTSHPVLYVCNVSEADASSGNEHTAAVAAMAKEQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPADEAEEFLSALGLNEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI + D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIGFDDYIAYKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|424871732|ref|ZP_18295394.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393167433|gb|EJC67480.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 367
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 258/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKDSVAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE++ +K LNLLT P+++V NV E + N + + I A Q ++I
Sbjct: 181 TLLSTLDAEEIVILKSLNLLTSHPVLYVCNVAEGDASTGNEFTEAVAIMAKEQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPDEEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|417859347|ref|ZP_12504403.1| translation-associated GTPase [Agrobacterium tumefaciens F2]
gi|338822411|gb|EGP56379.1| translation-associated GTPase [Agrobacterium tumefaciens F2]
Length = 390
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 24 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAG 83
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 84 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 143
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN P R
Sbjct: 144 NPVGDADTIETELMLADLESLERRVEQTRKRASSKDKESLAQLPVMEAVIALLNDGKPAR 203
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L EE+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 204 LLLKTLAAEEIEILKGLNLLTSHPVLYVCNVSEADALSGNEHTAAVAAMAKEQGAECVII 263
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 264 SAAIEAEVAQLPADEAEEFLSALGLTEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 323
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI + D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 324 RGTKAPAAAGVIHTDFERGFIRAFTIGFDDYIAYKGEVGAKEAGKGRDEGKEYVVQDGDV 383
Query: 357 LNFLFN 362
++F FN
Sbjct: 384 IHFRFN 389
>gi|330445224|ref|ZP_08308876.1| GTPase of unknown function family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489415|dbj|GAA03373.1| GTPase of unknown function family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 363
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD R+ L VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++I EL ++DL E+ I + K+ + + +K+L++++ +L + +R
Sbjct: 121 PLEDMDIINLELAMADLDTCERAIQRLAKRAKGGDNDAKFEIKVLEKMLPHLTEGGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +L+ LT+KP +++ANV E+GF+NN LD + A +N ++ +CA +
Sbjct: 181 LELTKEEKAAIDYLHFLTLKPTMYIANVNEDGFENNPFLDAVMERAAQENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ D++ FL +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDADREEFLADLGIEEPGLNRVIRSGYELLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I Y D++ GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGVIHTDFEKGFIRAEVIGYDDYINCGGEAGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|378826783|ref|YP_005189515.1| GTP-dependent nucleic acid-binding protein [Sinorhizobium fredii
HH103]
gi|365179835|emb|CCE96690.1| GTP-dependent nucleic acid-binding protein [Sinorhizobium fredii
HH103]
Length = 367
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ L ++ + L + P+R
Sbjct: 121 HPVEDAETIETELMLADLDSLERRTEQTRKRAIGKDKESMAQLPIMDASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ EEL ++ LNLLT P+++V NV E + + N + A Q ++I
Sbjct: 181 TLLPKLDAEELRILQGLNLLTAHPVLYVCNVAEADAAEGNEHTRAVAEMAKAQGAESVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPEDEAKEFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K GK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIAYNGETGAKEVGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|375111018|ref|ZP_09757230.1| GTP-binding protein YchF [Alishewanella jeotgali KCTC 22429]
gi|393762745|ref|ZP_10351371.1| GTP-binding protein YchF [Alishewanella agri BL06]
gi|397169687|ref|ZP_10493118.1| GTP-binding protein YchF [Alishewanella aestuarii B11]
gi|374568848|gb|EHR40019.1| GTP-binding protein YchF [Alishewanella jeotgali KCTC 22429]
gi|392606367|gb|EIW89252.1| GTP-binding protein YchF [Alishewanella agri BL06]
gi|396088675|gb|EJI86254.1| GTP-binding protein YchF [Alishewanella aestuarii B11]
Length = 363
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAQIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF D+ I H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVKGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIIHVAGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I EL+LSD+ E+ I + KK ++ + L +L+++ +L + +R
Sbjct: 121 PADDIDTINMELVLSDMDSAERAILRVQKKAKGGDKDAKAELAVLEKVKAHLENGLTLRQ 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE I ++N LTIKP +++ANV E+GF NN LD ++ A + ++ +CA +
Sbjct: 181 LELDKEEKALIAYMNFLTIKPTMYIANVLEDGFDNNPHLDVVRGIAAKEGAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K F+ ++GL+E LN +IR +SLL+L TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAELDDEEKAEFMADMGLEEPGLNRVIRGGYSLLNLHTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA +SY DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVSYDDFVQYNGEAGAKEAGKWRLEGKDYIVKDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|397688057|ref|YP_006525376.1| GTP-binding protein YchF [Pseudomonas stutzeri DSM 10701]
gi|395809613|gb|AFN79018.1| GTP-binding protein YchF [Pseudomonas stutzeri DSM 10701]
Length = 366
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++ ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFQDDNVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKEALAQKALLEKLIPHLTEGKPART 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L ++ EE +++ +LLT KP++++ANV E+GF++N LLD ++ A + ++ +C
Sbjct: 181 LLRDMSAEEKQTVRGFHLLTSKPVMYIANVAEDGFEDNPLLDIVRAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYNDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|296391494|ref|ZP_06880969.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
aeruginosa PAb1]
gi|416874254|ref|ZP_11918023.1| GTP-binding protein YchF [Pseudomonas aeruginosa 152504]
gi|334843658|gb|EGM22244.1| GTP-binding protein YchF [Pseudomonas aeruginosa 152504]
Length = 366
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGEEEKRLVRSFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAGYGLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGEQG K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEQGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|418403967|ref|ZP_12977442.1| GTP-binding protein YchF [Sinorhizobium meliloti CCNWSX0020]
gi|359502107|gb|EHK74694.1| GTP-binding protein YchF [Sinorhizobium meliloti CCNWSX0020]
Length = 367
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL LE+ ++ K+ K++ S+ L +++ + L + P+R
Sbjct: 121 HPVEDADTIETELMLADLDSLERRAEQTRKRATGKDKESMAQLPIMEASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ +EL ++ LNLLT P+++V NV E + N ++ A Q ++I
Sbjct: 181 TLLSKLDADELRILQSLNLLTSHPVLYVCNVAESDAATGNEHTRAVEKMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPEEEAKEFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIR+ TI+Y D++ Y GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRSNTIAYDDYIAYGGENGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|365849792|ref|ZP_09390260.1| GTP-binding protein YchF [Yokenella regensburgei ATCC 43003]
gi|364568117|gb|EHM45762.1| GTP-binding protein YchF [Yokenella regensburgei ATCC 43003]
Length = 364
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + K+ ++ + L+ L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKRAKGGDKDAKAELEALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKTLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAGEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VESDIAELDDEDRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|260427023|ref|ZP_05781002.1| GTP-binding protein YchF [Citreicella sp. SE45]
gi|260421515|gb|EEX14766.1| GTP-binding protein YchF [Citreicella sp. SE45]
Length = 365
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 255/364 (70%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M + G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L +I K
Sbjct: 1 MGFRMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARLDTLASIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
++ I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+DD +TH+ G +
Sbjct: 61 SQSIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDDDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TELI++D+ LEK + +K ++ +++ +L+K + L + P R
Sbjct: 121 DPVSDAETIETELIIADMESLEKRLQNIVRKVRGGDKEAVQQERLMKAALEMLEQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ ++ E+L K L LLT KP+++V NV E+ N L + + A Q ++I A
Sbjct: 181 LVEVDAEDLKQWKMLQLLTSKPVLYVCNVDEDEAATGNALSEAVARMAAEQGNAHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+EEEIS L+ + + FL LGL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIEEEISQLDAEEAEMFLSELGLEEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y+DF+ KGE G K AGK+R+EGK Y V+DGD+L+
Sbjct: 301 TLAPQAAGVIHGDFEKGFIRAETIAYEDFVANKGEAGAKEAGKMRAEGKTYTVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|402758805|ref|ZP_10861061.1| GTP-binding protein YchF [Acinetobacter sp. NCTC 7422]
Length = 363
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKEALATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYDDFIQYNGESGAKEAGKWRLEGKTYVVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|380510763|ref|ZP_09854170.1| GTP-binding protein YchF [Xanthomonas sacchari NCPPB 4393]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++ +++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL +EK +++ + ++ + +L ++ L + R
Sbjct: 121 PVSDIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALAEGKAGRN 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA ++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDAFLADLGLSEPGLNRVIRAGYTLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|325921465|ref|ZP_08183320.1| GTP-binding protein YchF [Xanthomonas gardneri ATCC 19865]
gi|325548012|gb|EGD19011.1| GTP-binding protein YchF [Xanthomonas gardneri ATCC 19865]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDLRLNQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++D + H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENDDVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQAALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRAHAVTEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLAEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI + DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIGFDDFIKYRGETGARDAGRLRLEGKEYRVKEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|424070800|ref|ZP_17808232.1| GTP-binding protein YchF [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407999883|gb|EKG40253.1| GTP-binding protein YchF [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 366
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 267/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E ++I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKVTIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|289678418|ref|ZP_06499308.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. syringae FF5]
gi|422665150|ref|ZP_16725022.1| GTP-binding protein YchF [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|440720012|ref|ZP_20900433.1| GTP-binding protein YchF [Pseudomonas syringae BRIP34876]
gi|440726137|ref|ZP_20906394.1| GTP-binding protein YchF [Pseudomonas syringae BRIP34881]
gi|443645402|ref|ZP_21129252.1| GTP-binding and nucleic acid-binding protein EngD/YchF [Pseudomonas
syringae pv. syringae B64]
gi|330975568|gb|EGH75634.1| GTP-binding protein YchF [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|440366734|gb|ELQ03811.1| GTP-binding protein YchF [Pseudomonas syringae BRIP34876]
gi|440367284|gb|ELQ04350.1| GTP-binding protein YchF [Pseudomonas syringae BRIP34881]
gi|443285419|gb|ELS44424.1| GTP-binding and nucleic acid-binding protein EngD/YchF [Pseudomonas
syringae pv. syringae B64]
Length = 366
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKEAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|283832843|ref|ZP_06352584.1| GTP-binding protein YchF [Citrobacter youngae ATCC 29220]
gi|291071444|gb|EFE09553.1| GTP-binding protein YchF [Citrobacter youngae ATCC 29220]
Length = 364
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF+ D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFESDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VEADIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|406037688|ref|ZP_11045052.1| GTP-binding protein YchF [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ +I L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKDAIATKAALEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECIAYDDFIQYNGENGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|194364507|ref|YP_002027117.1| GTP-dependent nucleic acid-binding protein EngD [Stenotrophomonas
maltophilia R551-3]
gi|194347311|gb|ACF50434.1| GTP-binding protein YchF [Stenotrophomonas maltophilia R551-3]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSDGKSGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|269961563|ref|ZP_06175925.1| GTP-dependent nucleic acid-binding protein engD [Vibrio harveyi
1DA3]
gi|269833604|gb|EEZ87701.1| GTP-dependent nucleic acid-binding protein engD [Vibrio harveyi
1DA3]
Length = 383
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 81 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 141 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPILTEGGMART 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 201 VELTKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APKAAAKIHTDFEKGFIRAEVVGYDDFIQCNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|254521390|ref|ZP_05133445.1| GTP-binding protein YchF [Stenotrophomonas sp. SKA14]
gi|219718981|gb|EED37506.1| GTP-binding protein YchF [Stenotrophomonas sp. SKA14]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKEAAARKPVLAKLQAALSDGKSGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|424045190|ref|ZP_17782756.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-03]
gi|408886633|gb|EKM25303.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HENC-03]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF++D I H++G+++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPILTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ +A +N ++ +CA +
Sbjct: 181 VELTKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNAYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDDEREEFLADLGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA IHTD ++GFIRA + Y DF+ GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAAKIHTDFEKGFIRAEVVGYDDFIQCNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|440744596|ref|ZP_20923899.1| GTP-binding protein YchF [Pseudomonas syringae BRIP39023]
gi|440374014|gb|ELQ10757.1| GTP-binding protein YchF [Pseudomonas syringae BRIP39023]
Length = 366
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVAMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|388470410|ref|ZP_10144619.1| GTP-binding protein YchF [Pseudomonas synxantha BG33R]
gi|388007107|gb|EIK68373.1| GTP-binding protein YchF [Pseudomonas synxantha BG33R]
Length = 366
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S+ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKSMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKEYVVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|289647279|ref|ZP_06478622.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 366
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYVVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|71733759|ref|YP_273260.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|302186452|ref|ZP_07263125.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. syringae 642]
gi|416014615|ref|ZP_11562365.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. glycinea str. B076]
gi|422604214|ref|ZP_16676231.1| GTP-binding protein YchF [Pseudomonas syringae pv. mori str.
301020]
gi|71554312|gb|AAZ33523.1| GTP-binding protein YchF [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320325682|gb|EFW81743.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. glycinea str. B076]
gi|330887873|gb|EGH20534.1| GTP-binding protein YchF [Pseudomonas syringae pv. mori str.
301020]
Length = 366
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|71065454|ref|YP_264181.1| GTP-dependent nucleic acid-binding protein EngD [Psychrobacter
arcticus 273-4]
gi|71038439|gb|AAZ18747.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 363
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 256/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L +IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +E+ I KK ++ + +L + K+I L + R
Sbjct: 121 PIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAQAMLDIFKKIEPLLAEGQAARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+ +E I+ L+T+KP +++ANV E+GF+NN LD ++ YA ++ +I +C ++
Sbjct: 181 ANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ DKK FL + ++E L+ +IR + LLD++TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAQLDEDDKKDFLAEMDMEEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ + GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|66044194|ref|YP_234035.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. syringae B728a]
gi|422675084|ref|ZP_16734432.1| GTP-binding protein YchF [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254901|gb|AAY35997.1| Conserved hypothetical protein 92 [Pseudomonas syringae pv.
syringae B728a]
gi|330972806|gb|EGH72872.1| GTP-binding protein YchF [Pseudomonas syringae pv. aceris str.
M302273]
Length = 366
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|424885432|ref|ZP_18309043.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393177194|gb|EJC77235.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 367
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKESVAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE+ +K LNLLT P+++V NV E N + + + A Q ++I
Sbjct: 181 TLLSTLDAEEIAILKGLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAVMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|49086120|gb|AAT51329.1| PA4673, partial [synthetic construct]
Length = 367
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+ + P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 EHVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L +EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGDEEKRLVRSFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL++LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAGYGLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGEQG K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEQGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|315127049|ref|YP_004069052.1| translation-associated GTPase [Pseudoalteromonas sp. SM9913]
gi|359447006|ref|ZP_09236633.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20439]
gi|315015563|gb|ADT68901.1| translation-associated GTPase [Pseudoalteromonas sp. SM9913]
gi|358039143|dbj|GAA72882.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20439]
Length = 363
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENVIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ +K + + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSADKAMFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LLD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAIAPINFLTIKPTMYIANVAEDGFENNPLLDRVREIAAAEDAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L+ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDEEDKLEFMADLGLEEPGLNLVIRGGYELLHLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFIAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|121997777|ref|YP_001002564.1| GTP-binding protein YchF [Halorhodospira halophila SL1]
gi|121589182|gb|ABM61762.1| GTP-binding protein YchF [Halorhodospira halophila SL1]
Length = 363
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 171/363 (47%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ I AENYPFCTI+PN+GI+ VPD RL L +V+
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTQNDIPAENYPFCTIDPNVGIVAVPDPRLYRLAELVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLVSGASKGEGLGN+FLAHIRET+ V V+RCF+ + + H+ G ++
Sbjct: 61 ERTIPTTMEFVDIAGLVSGASKGEGLGNQFLAHIRETDAVAMVLRCFESEDVHHVEGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P DAE I TEL L+DL + + + ++ + ++ ++ L LL+R L++ P+R
Sbjct: 121 PRADAETIHTELALADLDTVSRALTRQERAAKSGDKEAVRLRDLLERARQALDEGEPLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ EE ++ +L+T+KP++++ANV E+GF +N LL ++ A ++ ++ +CA +
Sbjct: 181 QGFSEEECRQLQGYHLITLKPLMYIANVAEDGFSDNPLLADVQALAESEGAQVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L++ ++ FL GL+E LN +IRA + LL L+T+FT G+KE RAWT+ G T
Sbjct: 241 EAELAVLDDEERDEFLAEYGLEEPGLNRVIRAGYDLLGLQTFFTAGEKEARAWTVRQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD++RGFIRA +SY D++ + GEQG K+AG+ R EGK+Y++ +GD+++F
Sbjct: 301 APEAAGRIHTDMQRGFIRAEVVSYDDYIAHSGEQGAKDAGRWRLEGKEYVLAEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|298159699|gb|EFI00741.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 366
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|420368358|ref|ZP_14869119.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
1235-66]
gi|391322382|gb|EIQ79069.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri
1235-66]
Length = 364
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++ +++
Sbjct: 61 QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D +VI TEL LSDL E+ I + KK ++ + L L++ + L + +R
Sbjct: 121 PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
L +L +E+ +IK+L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA
Sbjct: 181 LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIADAEGSVVVAVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +I++L++ D+ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 241 VEADIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TI+++DF+ YKGEQG K AGK+R+EGK Y+V+DGD++NF
Sbjct: 301 TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|424896238|ref|ZP_18319812.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393180465|gb|EJC80504.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKESMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE++ +K LNLLT P+++V NV E N + + + A Q ++I
Sbjct: 181 TLLSTLDAEEIVILKGLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAVMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|241205735|ref|YP_002976831.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240859625|gb|ACS57292.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L ++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESVAMLPIMDASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE++ +K LNLLT P+++V NV E + N + + + A Q ++I
Sbjct: 181 TLLSTLDAEEIVILKSLNLLTSHPVLYVCNVAEGDASTGNEFTEAVAVMAKEQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPEEEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|424882651|ref|ZP_18306283.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392519014|gb|EIW43746.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L ++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESMAMLPIMDASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE++ +K LNLLT P+++V NV E + N + + + A Q ++I
Sbjct: 181 TLLSTLDAEEIVILKSLNLLTSHPVLYVCNVAEGDASTGNEFTEAVAVMAKEQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPEEEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|257455042|ref|ZP_05620286.1| GTP-binding protein YchF [Enhydrobacter aerosaccus SK60]
gi|257447555|gb|EEV22554.1| GTP-binding protein YchF [Enhydrobacter aerosaccus SK60]
Length = 363
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L +IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKQLADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G +N
Sbjct: 61 ERVVPTSMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + + KK ++ + +L + +I L P R+
Sbjct: 121 PLSDIETINTELALADLEAVSRALINVGKKAKGGDKDAKAMLDVFNKIEPFLADGKPARM 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+ +E I+ L+T+KP +++ANV E+GF NN LDQ++ +A + ++ +C ++
Sbjct: 181 ANLDEDEKKIIRSYGLITLKPTMYIANVSEDGFDNNPYLDQVREFAAKDDALVVALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L++ +K+ FL+++G+ E L+ +IRA + LL+++TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAQLDDDEKQEFLESMGMTEAGLDRVIRAGYELLNMQTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA I++ DF+ Y GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFERGFIRAEVIAFDDFIEYNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|209550350|ref|YP_002282267.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424918703|ref|ZP_18342067.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|209536106|gb|ACI56041.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392854879|gb|EJB07400.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATSKDKESMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE+ +K LNLLT P+++V NV E N + + + A Q ++I
Sbjct: 181 TLLSTLDAEEIAILKGLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAVMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|407007205|gb|EKE22929.1| hypothetical protein ACD_6C00673G0002 [uncultured bacterium]
Length = 363
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 61 QRVIPTSMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDAVAKAITRLTKSAKGGDKEALATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+ N LD ++ A +N ++ +C ++
Sbjct: 181 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFEKNPHLDAVRKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA +SLL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYSLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECIAYDDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|257481999|ref|ZP_05636040.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|422598334|ref|ZP_16672597.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422679512|ref|ZP_16737785.1| GTP-binding protein YchF [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|330988614|gb|EGH86717.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331008859|gb|EGH88915.1| GTP-binding protein YchF [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 366
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKSTIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|409438361|ref|ZP_11265440.1| putative GTP-dependent nucleic acid-binding protein (engD)
[Rhizobium mesoamericanum STM3625]
gi|408749912|emb|CCM76611.1| putative GTP-dependent nucleic acid-binding protein (engD)
[Rhizobium mesoamericanum STM3625]
Length = 367
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQKLAAVAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+++I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SREIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+DL LE+ +++ K+ K++ SI L +++ +I LN+ P R
Sbjct: 121 NPVGDADTIETELMLADLESLERRVEQTRKRATGKDKDSIAQLPVMEAVIKLLNEGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L +E+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 LLLKTLAPDEIEILKGLNLLTSHPVLYVCNVAEADASTGNEHTKAVAAMAEKQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPEEEAREFLSALGLEEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IHTD +RGFIRA TI Y D++ +KGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHTDFERGFIRAFTIGYDDYINFKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|90022899|ref|YP_528726.1| GTP-dependent nucleic acid-binding protein EngD [Saccharophagus
degradans 2-40]
gi|89952499|gb|ABD82514.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
Length = 363
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT I AEN+PFCTIEPN GI+ VPD R+ ++ +VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTSAGIDAENFPFCTIEPNSGIVPVPDPRMDKISALVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PA ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF D + H+ G+++
Sbjct: 61 QRELPATMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIAHVVRCFDDPNVIHVEGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL +EK I + K K+ H++ + LL+ ++ +LN++ P+R
Sbjct: 121 PAADIDTINTELALADLDAVEKAIFRYTKLAKGKDAHAVAIKALLETLLPHLNEAKPLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L +++L +K L+LLT+KP +++ANV+E+GF+NN LLD+++ A +N ++ IC KL
Sbjct: 181 FPLTDDQLKLLKELSLLTLKPTMYIANVEEDGFENNPLLDKVREIAAAENAVVVPICNKL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ +K FL +G+ E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAEIAELDDEEKAEFLGEMGMTEPGLNRVIRAGYELLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I Y D++ KGE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIIGYDDYIACKGEAGAKEAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|86282735|gb|ABC91798.1| putative GTP-binding protein [Rhizobium etli CFN 42]
Length = 431
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 65 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 124
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 125 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 184
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 185 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESMAMLPIMEASLKLLNEGKPVR 244
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE+ +K LNLLT P+++V NV E + N + + A Q +II
Sbjct: 245 TLLSTLDAEEIAILKGLNLLTSHPVLYVCNVAEGDASTGNEFTEAVAAMAREQGAETVII 304
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 305 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 364
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 365 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 424
Query: 357 LNFLFN 362
++F FN
Sbjct: 425 IHFRFN 430
>gi|262278826|ref|ZP_06056611.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259177|gb|EEY77910.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 366
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 4 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKP 63
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 64 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 123
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 124 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 183
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 184 ADLSDDERKLVRGFGLITLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 243
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 244 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 303
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 304 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYIVQDGDVMHFR 363
Query: 361 FNI 363
FN+
Sbjct: 364 FNV 366
>gi|254482869|ref|ZP_05096106.1| GTP-binding protein YchF [marine gamma proteobacterium HTCC2148]
gi|214036950|gb|EEB77620.1| GTP-binding protein YchF [marine gamma proteobacterium HTCC2148]
Length = 364
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/364 (51%), Positives = 262/364 (71%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN GI+ +PD R ++ IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGIVPIPDPRQDKISVIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++ +I
Sbjct: 61 EREVATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVANKIE 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLK-RIIFNLNKSIPIR 179
P D E+I TEL L+DL EK + K + ++ SI + LL+ +++ LN++ PIR
Sbjct: 121 PAADIEIINTELALADLESCEKQLQKVVRTAKGGDKESIAMKALLEEKLLPQLNEAKPIR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ LN+ E +K L LLT+KP +++ANV E+GF NN L+ ++ A +N +++IC K
Sbjct: 181 GLDLNDNEQALVKTLFLLTVKPTMYIANVDEDGFDNNPHLEVVREIAEEENAVVVVICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI +L + ++ FL +LG++E LN +IRA + LL L TYFT G KE+RAWT+ G+
Sbjct: 241 LESEIIELEDDERAEFLADLGMEEPGLNRVIRAGYELLSLHTYFTAGVKEVRAWTVRVGS 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG+IHTD ++GFIRA ISY DF+ GEQG K+AG+ R EGK Y+V+DGD+++F
Sbjct: 301 TAPQAAGVIHTDFEKGFIRAEVISYADFIANNGEQGAKDAGRWRLEGKDYIVQDGDVIHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|440732736|ref|ZP_20912541.1| GTP-binding protein YchF [Xanthomonas translucens DAR61454]
gi|440367506|gb|ELQ04567.1| GTP-binding protein YchF [Xanthomonas translucens DAR61454]
Length = 363
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLGELARIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PISDIDTIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPVLAKLQTALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRARAATEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDTFLADLGLAEPGLNRVIRAAYALLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G + AG++R EGK Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYADFIKYKGEAGAREAGRLRLEGKDYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408787869|ref|ZP_11199595.1| GTP-binding protein YchF [Rhizobium lupini HPC(L)]
gi|424910952|ref|ZP_18334329.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392846983|gb|EJA99505.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|408486333|gb|EKJ94661.1| GTP-binding protein YchF [Rhizobium lupini HPC(L)]
Length = 367
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R+K L +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDARMKILADIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I L P R
Sbjct: 121 NPVGDAETIETELMLADLESLERRVEQTRKRATSKDKESLAQLPVMEAVIALLTDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L +EE+ +K LNLLT P+++V NV E + N + A Q +II
Sbjct: 181 LLLKTLADEEIEILKGLNLLTSHPVLYVCNVSEADASSGNEHTAAVAEMAKQQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPADEAEEFLSALGLNEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IH+D +RGFIRA TI + D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHSDFERGFIRAFTIGFDDYVTYKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|114319448|ref|YP_741131.1| GTP-binding protein YchF [Alkalilimnicola ehrlichii MLHE-1]
gi|114225842|gb|ABI55641.1| GTP-binding protein YchF [Alkalilimnicola ehrlichii MLHE-1]
Length = 363
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ +I AENYPFCTI+PN+G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAEIPAENYPFCTIDPNVGVVPVPDPRLDRLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLAHIRET+ V V+RCF+DD + H+ G ++
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNQFLAHIRETDAVAQVLRCFEDDDVHHVDGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI DAE I TEL L+DL +EK + + ++ ++ ++ +L R+ L + +R
Sbjct: 121 PISDAETINTELALADLETVEKALSRVERQTKSGDKEAVAKRDVLLRVRDGLGEGHSVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ I L+L+TIKP++++ANV E+GF++N LLDQ++ A + ++ +CA +
Sbjct: 181 LALDEAARALIADLHLITIKPLMYIANVAEDGFEDNPLLDQVRELARAEAAEVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L++ DK FL GL+E LN +IR + LL L+T+FT GKKE+RAWT+ G T
Sbjct: 241 EAELAALDDEDKAEFLAEYGLEEPGLNRVIRCGYRLLGLQTFFTAGKKEVRAWTVRRGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG IHTD +RGFIRA +SY DF+ GEQG K AGK+R EGK Y++ +GD+++F
Sbjct: 301 APEGAGRIHTDFQRGFIRAEVVSYDDFVACNGEQGAKEAGKLRLEGKDYVLAEGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|50085194|ref|YP_046704.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp.
ADP1]
gi|49531170|emb|CAG68882.1| putative GTP-binding protein [Acinetobacter sp. ADP1]
Length = 367
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 5 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 65 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L++I L++ P R
Sbjct: 125 PLDDIATINTELALADLDTVAKALLRLTKVAKSGDKEALATKAVLEKIQPLLDEGKPARA 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E I+ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 185 ADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 245 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 305 APQAAGVIHTDFEKGFIRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFR 364
Query: 361 FNI 363
FN+
Sbjct: 365 FNV 367
>gi|244539228|dbj|BAH83271.1| translation-associated GTPase [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KC +IGLPNVGKST+FNALT I +N+PFCTIEPN+G++ VPD RL + IV+
Sbjct: 1 MGFKCSIIGLPNVGKSTIFNALTHANIKTDNFPFCTIEPNVGVVSVPDYRLDQIATIVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P +K +DIAGLV GA KGEGLGN+FL +IR+T + HV+RCF+D+KI HISG +N
Sbjct: 61 QKIVPTFMKFMDIAGLVKGAYKGEGLGNQFLNNIRDTEAIGHVVRCFEDEKIIHISGAVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D +V+ ELILSD+ I E+ I + + E+ E + +L++ +++L KS +R
Sbjct: 121 PIADIKVVNNELILSDIEICERSIHRLQQNKRKVKENITEEINVLEKCLWHLEKSNMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ E I L LLT+KPI+++AN+ E+GF++N LDQL I A ++ ++ ICAK+
Sbjct: 181 LELSYTEKKIIAPLKLLTLKPIMYIANINEDGFQDNPYLDQLYIIAQKEHAVVVPICAKI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I L ++ F+ +GLKE +N LIR + LL L+ YFTVGKKE+RAWT+P G T
Sbjct: 241 ESDIVKLTKTERHQFMLAMGLKEPCINCLIRHGYKLLGLQVYFTVGKKELRAWTVPLGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A AAG IH D K+GFIRA IS+KDF+ YKGE+G K AGK+R EG++Y+V+DGDI+NFL
Sbjct: 301 ALYAAGKIHEDFKKGFIRARIISFKDFIDYKGEKGAKEAGKMRYEGREYIVQDGDIINFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|293608337|ref|ZP_06690640.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427422875|ref|ZP_18913049.1| GTP-binding protein YchF [Acinetobacter baumannii WC-136]
gi|292828910|gb|EFF87272.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700510|gb|EKU70093.1| GTP-binding protein YchF [Acinetobacter baumannii WC-136]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN L+ +K A ++N ++ +C ++
Sbjct: 181 ADLSDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLASDENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|256821848|ref|YP_003145811.1| GTP-binding protein YchF [Kangiella koreensis DSM 16069]
gi|256795387|gb|ACV26043.1| GTP-binding protein YchF [Kangiella koreensis DSM 16069]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNALT I A NYPFCTIEPN G++ +PD RL L IV
Sbjct: 1 MALNCGIVGLPNVGKSTLFNALTDAGIDAANYPFCTIEPNTGVVPIPDPRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ PA ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF +D + H++G+++
Sbjct: 61 QRVLPATMEFVDIAGLVAGASKGEGLGNKFLANIRETHAIAHVVRCFDNDDVVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK I K K ++ + L +L++ L++ +R
Sbjct: 121 PIADIETINTELALADLEAVEKRILKTAKIAKSGDKDAKVELAILEKAKACLDEGNALRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E ++ L+T KP +++ANV E+GF+NN LLD+++ +A ++N ++ ICA +
Sbjct: 181 LDLDKDEQKIMRKFQLITNKPTMYIANVSEDGFENNPLLDKVREFAASENSEVVPICASI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L++ DK FL +LG E LN +IRA +SLL+L+TYFT G KE+RAW + G T
Sbjct: 241 ESEIAALDDEDKADFLADLGQDEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWQVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA I+Y DF+ GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAAVIHTDFEKGFIRAEVIAYDDFIAGNGEAGAKEAGKWRLEGKEYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408377530|ref|ZP_11175131.1| GTP-binding protein YchF [Agrobacterium albertimagni AOL15]
gi|407748521|gb|EKF60036.1| GTP-binding protein YchF [Agrobacterium albertimagni AOL15]
Length = 367
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R+K L +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMKKLADIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G+I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL LE+ +++ K+ K++ + L +++ +I LN+ P R
Sbjct: 121 DPVGDADTIETELMLADLESLERRVEQARKRATGKDKEAAAQLPVMEAVIKLLNEGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
++ ++ +E+ +K LNLLT P+++V NV E + N + + A Q ++I
Sbjct: 181 VLLKTMPADEIEVLKGLNLLTSHPVLYVCNVTEGDAATGNKHTEAVAKMAAEQGAECVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + FL LGL E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEEEATEFLSALGLDEAGLDRLIRAGYQLLDLITYFTVGPKECRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TISY D++ YKGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTISYDDYIAYKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|323142933|ref|ZP_08077643.1| GTP-binding protein YchF [Succinatimonas hippei YIT 12066]
gi|322417286|gb|EFY07910.1| GTP-binding protein YchF [Succinatimonas hippei YIT 12066]
Length = 365
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 259/364 (71%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD+RL + IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTIEPNTGIVPVPDERLDKIAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV GASKGEGLGN+FL +IRET+ + HV+RCF D + H++G+++
Sbjct: 61 QKIVPTAMEFVDIAGLVKGASKGEGLGNQFLMNIRETDAIAHVVRCFDDPNVIHVNGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDK-ENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
PI D E+I TEL L+DL + +K + + E + ++ ++ + L++ L + +R
Sbjct: 121 PISDVEIINTELALADLDVCDKALQRLEKRARTGGDKEALAQVVALEKCKPALEEGKMLR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+S E+L +++ N LT+KP++++ANV E+GF +N L +L+ YA +N ++ + A
Sbjct: 181 QISFTKEDLHALRGFNFLTLKPVMYIANVSEDGFTDNPYLTKLEDYAAKENSIVVPVSAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E +++ + D+K F+D+LG+ E LN +IRA + LL L+T+FT G KE+RAWT+ G
Sbjct: 241 IEADLASMEPEDRKEFMDSLGISEPGLNRVIRAGYKLLGLQTFFTAGPKEVRAWTVKVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IH+D +RGFIRA TI+Y DF+ Y GE G K AGK+RSEGK Y+V+DGD+ F
Sbjct: 301 TAPQAAGKIHSDFERGFIRAQTIAYDDFIKYGGENGAKEAGKLRSEGKDYIVQDGDLFEF 360
Query: 360 LFNI 363
LFN+
Sbjct: 361 LFNV 364
>gi|77359994|ref|YP_339569.1| GTP-dependent nucleic acid-binding protein EngD [Pseudoalteromonas
haloplanktis TAC125]
gi|76874905|emb|CAI86126.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
haloplanktis TAC125]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF DD I H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFNDDNIIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ EK + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSAEKASFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +N LTIKP +++ANV E+GF+NN LD ++ A ++ ++ +CA +
Sbjct: 181 LELTKEEKAAISSINFLTIKPTMYIANVAEDGFENNPYLDVVRAIAAAEDAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L+ DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELDEEDKLEFMADLGLEEPGLNLVIRGGYELLQLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ +KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFIAFKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|425901501|ref|ZP_18878092.1| GTP-binding protein YchF [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883710|gb|EJL00197.1| GTP-binding protein YchF [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 366
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I+ ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIELELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ EE + I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMSAEEKLVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398354519|ref|YP_006399983.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium
fredii USDA 257]
gi|390129845|gb|AFL53226.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium
fredii USDA 257]
Length = 367
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDGRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ D+E I+TEL+L+DL LE+ ++ K+ K++ S+ L ++ + L + P+R
Sbjct: 121 HPVEDSETIETELMLADLESLERRTEQTRKRAIGKDKESMAQLPIMDASLKLLQEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ EEL ++ LNLLT P+++V NV E + N + A Q ++I
Sbjct: 181 TLLAKLDAEELRILQGLNLLTAHPVLYVCNVAESDAATGNEHTRAVAEMAKAQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTIP
Sbjct: 241 SAAIESEVAQLPEEEAREFLAALGLEEAGLDRLIRAGYKLLDLITYFTVGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIALGGENGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|420719089|ref|ZP_15198540.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-58]
gi|391599189|gb|EIS42836.1| GTP-dependent nucleic acid-binding protein engD [Yersinia pestis
PY-58]
Length = 356
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/356 (51%), Positives = 261/356 (73%)
Query: 8 IGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKKIFPAI 67
+GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK ++I P
Sbjct: 1 MGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILPTT 60
Query: 68 IKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPIHDAEV 127
++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++P D E
Sbjct: 61 MEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPADDIET 120
Query: 128 IQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMSLNNEE 187
I TEL LSDL E+ I + KK ++ + L+ L++ + +L + +R + L E+
Sbjct: 121 INTELALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRALDLTAED 180
Query: 188 LMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEEEISDL 247
+I++L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +E +I+++
Sbjct: 181 KAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAVESDIAEM 240
Query: 248 NNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAEQAAGI 307
+ D+ F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G TA QAAG
Sbjct: 241 EDEDRAEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGATAPQAAGK 300
Query: 308 IHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFNI 363
IHTD ++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFLFN+
Sbjct: 301 IHTDFEKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFLFNV 356
>gi|85713255|ref|ZP_01044280.1| Predicted GTPase, probable translation factor [Idiomarina baltica
OS145]
gi|85692924|gb|EAQ30897.1| Predicted GTPase, probable translation factor [Idiomarina baltica
OS145]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +CG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L +IV
Sbjct: 1 MGFRCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVAVPDPRLDVLESIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+DD I H+SG IN
Sbjct: 61 QKVIPTTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDDNIVHVSGGIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL ++K + + KK + + + +L+++ L++ R
Sbjct: 121 PADDIDTINTELALADLDSVDKSLHRLGKKAKGGDAQAKAEIAVLEKLKPALDEGEMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L ++E I+ NLLT+KP +++ANV E+GF+NN L+ ++ A +N ++ +CA +
Sbjct: 181 VHLTDDEKAVIRSYNLLTLKPTMYIANVNEDGFENNPHLETVRQIAAKENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ DK FL+ LG E LN +IR + LL+L+TYFT G KE+RAWT+ G +
Sbjct: 241 ESEIAELDDDDKAAFLEELGQAEPGLNRVIRGGYQLLNLQTYFTAGVKEVRAWTVKIGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y D++ Y GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGRIHTDFEKGFIRAEVVGYDDYVEYNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|359439401|ref|ZP_09229372.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20311]
gi|392554284|ref|ZP_10301421.1| GTP-binding protein YchF [Pseudoalteromonas undina NCIMB 2128]
gi|358025877|dbj|GAA65621.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas
sp. BSi20311]
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 61 QRILTTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENVIHVAGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ +K I + KK ++ + E +L+++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDSADKAIFRNAKKAKGGDKDAKEQNAVLEKVKVHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EE +I +N LTIKP +++ANV E+GF+NN LLD+++ A ++ ++ +CA +
Sbjct: 181 LALTKEEKAAIAPINFLTIKPTMYIANVAEDGFENNPLLDRVREIAAAEDAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L + DK F+ +LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEDEDKLEFMADLGLEEPGLNLVIRGGYELLHLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ DF+ KGE G K AGK+R EGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDFIACKGESGAKEAGKMRQEGKEYIVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|85059860|ref|YP_455562.1| GTP-dependent nucleic acid-binding protein EngD [Sodalis
glossinidius str. 'morsitans']
gi|84780380|dbj|BAE75157.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 363
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I N+PFCTIEPN G++ +PD R+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIETANFPFCTIEPNTGVVPMPDARMDQLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G++
Sbjct: 61 QRTVPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVC 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSDL E+ I + K+ ++ + L L++ + +L+ + +R
Sbjct: 121 PAEDIDVINTELALSDLEACERAIHRVQKRAKGGDKDAKLELSALEKCMHHLSNAGMLRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +I++L+ LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +
Sbjct: 181 LDLSVEEKSAIRYLSFLTLKPTMYIANVNEDGFENNPYLDEVRAIAAAEGSVVVAVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L+ +++ F+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESDIAELDEEEREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA TIS+ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFL
Sbjct: 301 APQAAGKIHTDFEKGFIRAQTISFADFITYKGEQGAKEAGKMRSEGKEYVVKDGDVMNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|338209607|ref|YP_004653654.1| GTP-binding protein YchF [Runella slithyformis DSM 19594]
gi|336303420|gb|AEI46522.1| GTP-binding protein YchF [Runella slithyformis DSM 19594]
Length = 365
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/365 (50%), Positives = 260/365 (71%), Gaps = 2/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L+CG++GLPNVGKSTLF+AL+ K A NYPFCTIEPN+G++EVPD+R++ L +VK
Sbjct: 1 MSLQCGIVGLPNVGKSTLFSALSSAKAEAANYPFCTIEPNVGVVEVPDERMQILEGLVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P I+++VDIAGLV GASKG+GLGN+FLA+IRE + +IHV+RCF DD I H+ G +N
Sbjct: 61 QRMVPTIVEIVDIAGLVRGASKGQGLGNQFLANIREVDAIIHVVRCFADDNIVHVEGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L DL +EK + K + + + L+++ R+ L + +R
Sbjct: 121 PVSDKEIIDLELQLKDLESIEKKFARVEKSARVGDAKAKVELEIITRVKNALLQGKSVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE +I L LLTIKP+I+VANV E+ N N +DQLK +N +I++CA
Sbjct: 181 VGLTEEEKAAIADLQLLTIKPVIYVANVDESAIINGNEYVDQLKAAVAEENADVIVLCAA 240
Query: 240 LEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
+E EI+++ + +++ FL+ GLKE+ LN LIRAS+ +L+L TYFT G KE+RAWTI G
Sbjct: 241 IESEIAEMEDPEERAVFLEEYGLKESGLNRLIRASYHILNLITYFTAGVKEVRAWTIQRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
A QAAG+IHTD ++GFIRA I D+ YK E C++AGKI EGK+Y+V+DGDI++
Sbjct: 301 WKAPQAAGVIHTDFEKGFIRAEVIKLSDYEKYKTEAACRDAGKISVEGKEYVVQDGDIMH 360
Query: 359 FLFNI 363
F FN+
Sbjct: 361 FRFNV 365
>gi|162329633|ref|YP_470525.2| GTP-dependent nucleic acid-binding protein EngD [Rhizobium etli CFN
42]
Length = 367
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE+ +K LNLLT P+++V NV E + N + + A Q +II
Sbjct: 181 TLLSTLDAEEIAILKGLNLLTSHPVLYVCNVAEGDASTGNEFTEAVAAMAREQGAETVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|400286610|ref|ZP_10788642.1| GTP-binding protein YchF [Psychrobacter sp. PAMC 21119]
gi|400287587|ref|ZP_10789619.1| GTP-binding protein YchF [Psychrobacter sp. PAMC 21119]
gi|400288087|ref|ZP_10790119.1| GTP-binding protein YchF [Psychrobacter sp. PAMC 21119]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 256/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L +IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDLRLKKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +E+ + KK ++ + +L + K+I L R
Sbjct: 121 PIDDIETINTELALADLEAVERAVFNLTKKAKGGDKDASAMLDVFKKIEPLLADGQAARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+++E I+ L+T+KP +++ANV E+GF+NN LD ++ YA ++ +I +C ++
Sbjct: 181 ANLDSDEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ DKK FL + ++E L+ +IR + LLD++TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAQLDEDDKKDFLAEMDMEEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ + GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422648181|ref|ZP_16711305.1| GTP-binding protein YchF [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330961719|gb|EGH61979.1| GTP-binding protein YchF [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 366
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E + I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKVVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|410089583|ref|ZP_11286197.1| GTP-binding protein YchF [Pseudomonas viridiflava UASWS0038]
gi|409763118|gb|EKN48103.1| GTP-binding protein YchF [Pseudomonas viridiflava UASWS0038]
Length = 366
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLISHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ YKGE G K AGK R EGK Y+V+DGD+L
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAECVAYDDFIQYKGEGGAKEAGKWRLEGKDYIVKDGDVL 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|444380493|ref|ZP_21179623.1| GTP-binding and nucleic acid-binding protein YchF [Enterovibrio sp.
AK16]
gi|443675449|gb|ELT82181.1| GTP-binding and nucleic acid-binding protein YchF [Enterovibrio sp.
AK16]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G++N
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL LSD+ E+ I ++ KK + + + +L++++ L + +R
Sbjct: 121 PADDIDVINTELALSDMEACERAIQRQAKKAKGGDRDAKFEIAVLEKLLPVLEEGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE ++ +LN LT+KP +++ANV ++GF+NN LD ++ A + ++ +CA++
Sbjct: 181 VELTKEEHAAVDYLNFLTMKPTMYIANVNDDGFENNPYLDIVREIAEAEGATVVAVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L+ + FL+ +GL+E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EGELSELDADEAAVFLEEMGLEEPGLNRVIRAGYDLLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA I Y D++ GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIIGYDDYIENNGEAGAKVAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|262375419|ref|ZP_06068652.1| translation-associated GTPase [Acinetobacter lwoffii SH145]
gi|262309673|gb|EEY90803.1| translation-associated GTPase [Acinetobacter lwoffii SH145]
Length = 367
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 5 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G I+
Sbjct: 65 QRVIPTSMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGRID 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 125 PLDDIATINTELALADLDAVAKAITRLTKSAKGGDKEALATKAVLEKIQPLLDEGKPARA 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD ++ A +N ++ +C ++
Sbjct: 185 ADLDDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVRKLAAEENAIVVPLCNQI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 245 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYLLLGLQTYFTAGVQEVRAWTVKIGAT 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA I+Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 305 APQAAGVIHTDFEKGFIRAECIAYDDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVLHFR 364
Query: 361 FNI 363
FN+
Sbjct: 365 FNV 367
>gi|344206158|ref|YP_004791299.1| GTP-binding protein YchF [Stenotrophomonas maltophilia JV3]
gi|343777520|gb|AEM50073.1| GTP-binding protein YchF [Stenotrophomonas maltophilia JV3]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+GI+ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAAIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L+ R
Sbjct: 121 PISDIETIDTELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALSDGKSGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ L LLT+KP++++ANV E+GF+NN L+ ++ +A + ++ + A +
Sbjct: 181 VGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLEAVRAHAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +I A++SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSLLGLQTYFTAGVKEVRAWTVRKGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G K AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAKEAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|90581721|ref|ZP_01237508.1| putative GTP-binding protein [Photobacterium angustum S14]
gi|90437075|gb|EAS62279.1| putative GTP-binding protein [Vibrio angustum S14]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD R+ L V
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G I+
Sbjct: 61 ERIMPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++I EL ++DL E+ I + K+ + + +K+L++++ +L + +R
Sbjct: 121 PLEDMDIINLELAMADLDTCERAIQRLAKRAKGGDNDAKFEIKVLEKMLPHLTEGGMLRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +I +L+ LT+KP +++ANV E+GF+NN LD++ A +N ++ +CA +
Sbjct: 181 LELTKEEKAAIDYLHFLTLKPTMYIANVNEDGFENNPFLDKVIARAAEENAVVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDEDREEFLADMGIEEPGLNRVIRSGYQLLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I Y D++ GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGVIHTDFEKGFIRAEVIGYDDYINCGGESGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|88704031|ref|ZP_01101746.1| Conserved hypothetical protein 92 [Congregibacter litoralis KT71]
gi|88701858|gb|EAQ98962.1| Conserved hypothetical protein 92 [Congregibacter litoralis KT71]
Length = 364
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 264/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I AEN+PFCTIEPN G++ VPD R ++ +VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRAGIDAENFPFCTIEPNAGVVPVPDPRQSKISELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H+S I+
Sbjct: 61 QKEIATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVSNAID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLK-RIIFNLNKSIPIR 179
P D E+I TEL L+DL EK + K + ++ SI + LL+ +++ LN++ P+R
Sbjct: 121 PAADIEIINTELALADLESCEKQLAKVVRTAKGGDKESIAMKALLENKLLPQLNEARPVR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L++ E +K L LLT KP +++ANV E G + N +D ++ A +N +++IC K
Sbjct: 181 GLTLDDNEQALVKSLFLLTSKPTLYIANVDEEGLEGNAYVDIVRGIAATENAEVVVICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI +L + ++ FL ++G++E LN +IRA + LL+L+TYFT G +E+RAWT+ G
Sbjct: 241 LESEIIELEDDERAEFLADMGMEEPGLNRVIRAGYELLNLQTYFTAGPQEVRAWTVKVGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA +AAG+IHTD ++GFIRA I Y+DF+ +KGEQG K+AG+ R EGK+Y+V+DGD+++F
Sbjct: 301 TAPEAAGVIHTDFQKGFIRAEVIGYEDFITHKGEQGAKDAGRWRLEGKEYVVQDGDVVHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|365540930|ref|ZP_09366105.1| GTP-binding protein YchF [Vibrio ordalii ATCC 33509]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD L L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLHLDALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I ++ K+ ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRQAKRAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELSKEELAAVDYLNFLTLKPTMYIANVSEDGFENNPYLDAVREFAEKENNSVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L D+ FL +LG++E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEDRAEFLADLGIEEPGLNRVIRTGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA + Y DF+ Y+GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVVGYDDFIQYRGENGAKEAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|229588275|ref|YP_002870394.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
fluorescens SBW25]
gi|15042157|gb|AAK81938.1|AF292566_22 putative GTP-binding protein [Pseudomonas fluorescens]
gi|229360141|emb|CAY46998.1| putative GTP-binding protein [Pseudomonas fluorescens SBW25]
Length = 366
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVAMPDPRLQELAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S+N +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKSMNTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLTEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|134299143|ref|YP_001112639.1| GTP-binding protein YchF [Desulfotomaculum reducens MI-1]
gi|134051843|gb|ABO49814.1| GTP-binding protein YchF [Desulfotomaculum reducens MI-1]
Length = 367
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/367 (50%), Positives = 257/367 (70%), Gaps = 4/367 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LKCG++GLPNVGKSTLFNA+T+ + NYPFCTIEPN+G++ VPD RL L +V
Sbjct: 1 MPLKCGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGVVTVPDHRLDKLTELVIP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + VDIAGLV GAS+GEGLGNKFL+HIRE + + HV+RCF DD ITH+SG+I+
Sbjct: 61 KKTIPTTFEFVDIAGLVKGASRGEGLGNKFLSHIREVDAIAHVVRCFIDDDITHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFN-LNKSIPIR 179
PI+D EVI EL+L+DL +E+ ++ K +++ + +L++R+ L + P R
Sbjct: 121 PINDIEVINLELVLADLESMERRQERLASKLKSQDKQAKIEYQLIQRLKDEALAQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIII 236
+ +EE+ +KF +LLTIKPII+V NV EN + N + Q+K YA +N ++ +
Sbjct: 181 SLEFTDEEMKIVKFFHLLTIKPIIYVTNVGENDLPDLEKNSYIQQVKEYAVQENATVVPV 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A+LE EI++L +K+ FL+ LGL E+ L+ LIRAS++LL LRTYFT G +E+RAWTI
Sbjct: 241 SAQLESEIAELQGEEKRLFLEELGLDESGLDKLIRASYNLLGLRTYFTAGVQEVRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IHTD +RGFIRA +SY D + + AGK+R EGK Y+V+DGDI
Sbjct: 301 AGTKAPQAAGVIHTDFERGFIRAEVVSYDDLVTAGSMAKAREAGKLRLEGKDYVVQDGDI 360
Query: 357 LNFLFNI 363
++F FN+
Sbjct: 361 MHFRFNV 367
>gi|269102020|ref|ZP_06154717.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161918|gb|EEZ40414.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD R+ L VK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++I EL ++DL E+ + + K+ + + +K+L++++ +L + +R
Sbjct: 121 PLEDMDIINLELAMADLDTCERALQRLAKRAKGGDNEAKFEIKVLEKMLPHLTEGGMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE ++I +L+ LT+KP +++ANV E+GF+NN LD + A +N ++ +CA +
Sbjct: 181 LELTKEEKVAIDYLHFLTLKPTMYIANVNEDGFENNPFLDAVMERAAQENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ D++ FL +LG++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDADREEFLADLGIEEPGLNRVIRSGYELLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I Y D++ GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGVIHTDFEKGFIRAEVIGYDDYIECGGEAGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|352102012|ref|ZP_08959059.1| GTP-binding protein YchF [Halomonas sp. HAL1]
gi|350600183|gb|EHA16253.1| GTP-binding protein YchF [Halomonas sp. HAL1]
Length = 363
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +EK + + ++ +I +L RI ++ + +P+R
Sbjct: 121 PRADIETINIELALADLDTVEKASQRLVRSVKGGDKDAIATKAILDRIQPHVAEGLPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K LT+KP +++ANV E+GF+NN LD + A + ++ +C +L
Sbjct: 181 FGLSEEEQRQVKSFGFLTLKPTMYIANVNEDGFENNPYLDIVNEIAAEEGALVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FL +G+ E L+ +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDEERSMFLSEMGMDEPGLDRVIRAGYSLLGLQTYFTAGVKEVRAWTVKEGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA ++Y DF+ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVVAYDDFVSLGGEQGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|330502025|ref|YP_004378894.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
mendocina NK-01]
gi|328916311|gb|AEB57142.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
mendocina NK-01]
Length = 366
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ S+ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKESVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L L ++E K +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LLKDLGDDEKRLAKTFHLLTTKPVMYIANVAEDGFENNPHLDVVQAIADAEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G++E LN +IRA +SLL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ++Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVVAYDDFIAYKGESGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|419954315|ref|ZP_14470454.1| GTP-binding protein YchF [Pseudomonas stutzeri TS44]
gi|387968866|gb|EIK53152.1| GTP-binding protein YchF [Pseudomonas stutzeri TS44]
Length = 366
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I+ ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIELELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L +EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLADEEKRLVRGFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLGLQTYFTAGVKEVRAWTVKI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|359395832|ref|ZP_09188884.1| GTP-dependent nucleic acid-binding protein engD [Halomonas
boliviensis LC1]
gi|357970097|gb|EHJ92544.1| GTP-dependent nucleic acid-binding protein engD [Halomonas
boliviensis LC1]
Length = 363
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +EK + + ++ +I +L RI ++ + +P+R
Sbjct: 121 PRADIETINLELALADLDTVEKASQRLVRSVKGGDKDAIATKAILDRIQPHVAEGLPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K LT+KP +++ANV E+GF+NN LD + A + ++ +C +L
Sbjct: 181 FGLSEEEQRQVKSFGFLTLKPTMYIANVNEDGFENNPYLDIVNEIAAEEGALVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FL +G+ E L+ +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDEERSMFLSEMGMDEPGLDRVIRAGYSLLGLQTYFTAGVKEVRAWTVKEGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA ++Y DF+ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVVAYDDFVSLGGEQGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|336450043|ref|ZP_08620500.1| GTP-binding protein YchF [Idiomarina sp. A28L]
gi|336283200|gb|EGN76407.1| GTP-binding protein YchF [Idiomarina sp. A28L]
Length = 363
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 267/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L++IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAANFPFCTIEPNTGVVSVPDTRLTQLSDIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H++G+++
Sbjct: 61 QRVIPTTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I TEL L+DL +EK + + +KK ++ + + + +L++++ L + R
Sbjct: 121 PLEDIDTINTELALADLDSVEKAVYRLSKKAKGGDKQAKDEVAVLEKLLPALAEGHMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L++++ I+ NLLT+KP +++ NV E+GF+NN L+ ++ A N+N ++ +CA +
Sbjct: 181 VELSDDDKKVIRSFNLLTLKPTMYICNVAEDGFENNPHLETVRKLAENENAIVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + +K FLD++GL+E LN +IRA + LL+L TYFT G KE+RAWT+ +T
Sbjct: 241 ESEIAELEDDEKAEFLDSMGLEEPGLNRVIRAGYELLNLHTYFTAGVKEVRAWTVKKRST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + + DF+ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGRIHTDFEKGFIRAEIVGFDDFINNNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|335049086|ref|ZP_08542097.1| GTP-binding protein YchF [Megasphaera sp. UPII 199-6]
gi|333764531|gb|EGL41925.1| GTP-binding protein YchF [Megasphaera sp. UPII 199-6]
Length = 368
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 258/365 (70%), Gaps = 3/365 (0%)
Query: 2 NLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTK 61
NL+ G++GLPNVGKSTLFNA+TK A NYPFCTIEPN+G++EVPD RL+ L N+ K
Sbjct: 4 NLEVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDARLRTLTNMYHPK 63
Query: 62 KIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINP 121
K PA+++ VDIAGLV+GASKGEGLGNKFL+HIRET+ + V+RCF+DD ITH+SG ++P
Sbjct: 64 KTIPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDDNITHVSGSVDP 123
Query: 122 IHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLM 181
+ D ++I TEL L+DL +++ +D+ K ++ + L +L++I+ L P+R +
Sbjct: 124 LRDIDIINTELCLADLETVQRRVDRLAKIAQCGDKAAKAELAVLQKILTALEAGEPVRKV 183
Query: 182 SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIICA 238
+L +EE ++K LNLLTIKPI+++ANV E+ N L+ +L +A + ++ + A
Sbjct: 184 ALQDEEKQTVKELNLLTIKPILYIANVAEDEAAQPDANPLVQKLTAFAAAEGAQVVAVSA 243
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI++L + + FL+ LGL E+ L LI+A +SLL L +FT G E+RAWTI G
Sbjct: 244 KIEAEIAELPDDEAAAFLEELGLSESGLTKLIKAGYSLLGLINFFTAGADEVRAWTIVKG 303
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A++AAG IHTDI+RGFIRA +SY D + GEQ K G +R EGK+YL++DGD+
Sbjct: 304 TKAQKAAGKIHTDIERGFIRAEIVSYTDLIACGGEQAAKEKGLVRLEGKEYLMQDGDVTY 363
Query: 359 FLFNI 363
F FN+
Sbjct: 364 FRFNV 368
>gi|93006350|ref|YP_580787.1| GTP-dependent nucleic acid-binding protein EngD [Psychrobacter
cryohalolentis K5]
gi|92394028|gb|ABE75303.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5]
Length = 363
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L +IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +E+ I KK ++ + +L + K+I L + R
Sbjct: 121 PIDDIETINTELALADLEAVERAIFNLTKKAKGGDKDAGAMLDIFKKIEPLLAEGQAARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L+ +E I+ L+T+KP +++ANV E+GF+NN LD ++ YA ++ +I +C ++
Sbjct: 181 ANLDADEKKLIRSYGLITLKPTMYIANVSEDGFENNPYLDAVRNYATGEDSIVIALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ DKK FL + + E L+ +IR + LLD++TYFT G KE+RAWT+ G T
Sbjct: 241 ESEIAQLDEDDKKDFLAEMDMLEAGLDQVIRGGYDLLDMQTYFTAGVKEVRAWTVAVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD +RGFIRA I+Y DF+ + GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFERGFIRAEVIAYDDFIEHNGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|430004267|emb|CCF20058.1| Putative GTP-dependent nucleic acid-binding protein (engD)
[Rhizobium sp.]
Length = 367
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQKLAQIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFEDTDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I L P R
Sbjct: 121 DPVGDAETIETELMLADLESLERRVEQTRKRATGKDKESLAQLPVMEAVIKLLQDGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +++ EE+ +K LNLLT P+++V NV E + N + + A Q +II
Sbjct: 181 LLLKTMSPEEIDILKGLNLLTSHPVLYVCNVAEADAATGNAHTEAVSKMAAEQGAECVII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + FL LGL+E L+ LIRA ++LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEATEFLSALGLEEAGLDRLIRAGYNLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IHTD +RGFIRA TI Y D++ YKGE G K AGK R EGK+Y+V DGD+
Sbjct: 301 RGTKAPQAAGVIHTDFERGFIRAFTIGYDDYIAYKGEVGAKEAGKGRDEGKEYVVHDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|354581619|ref|ZP_09000522.1| GTP-binding protein YchF [Paenibacillus lactis 154]
gi|353200236|gb|EHB65696.1| GTP-binding protein YchF [Paenibacillus lactis 154]
Length = 366
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 258/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V+
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G++N
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I ELIL+DL +EK I++ K N+ + ++LL+R+ L P R
Sbjct: 121 PVSDIQTINLELILADLDSVEKRIERTKKNMKGGNKQYAQEVELLERLKEALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L++EE + ++ L+LLT+KP+++ ANV E+G + N + Q++ +A +N ++ I
Sbjct: 181 VELSDEEKLIVRDLHLLTLKPVLYAANVSEDGVTDADSNPYVQQVREFAAAENAAVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL+E+ LN LI+A++SLL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKAMFLEELGLEESGLNRLIKAAYSLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IH+D +RGFIRA +SY D + G K G++R EGK Y+V DGD++
Sbjct: 301 GTKAPQAAGVIHSDFERGFIRAEVVSYDDLVAAGSMNGAKERGQLRLEGKDYVVNDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|399036817|ref|ZP_10733781.1| GTP-binding protein YchF [Rhizobium sp. CF122]
gi|398065644|gb|EJL57265.1| GTP-binding protein YchF [Rhizobium sp. CF122]
Length = 367
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAQAQAANYPFCTIEPNTGEVAVPDPRMQKLATVAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + V+HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+DL LE+ +++ K+ K++ S+ L +++ +I LN+ P R
Sbjct: 121 NPVGDADTIETELMLADLESLERRVEQTRKRAASKDKDSLTQLPVMEAVIKLLNEGKPAR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ +L EE+ +K LNLLT P+++V NV E + N + A Q ++I
Sbjct: 181 LLLKTLALEEIEILKGLNLLTSHPVLYVCNVAEADASTGNEHTKAVAAMAEKQGAECVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + FL LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPDEEAAEFLSALGLEEAGLDRLIRAGYHLLDLITYFTVGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI+Y D++ +KGE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPAAAGVIHTDFERGFIRAFTIAYDDYINFKGEVGAKEAGKGRDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|299770489|ref|YP_003732515.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
oleivorans DR1]
gi|375134482|ref|YP_004995132.1| translation-associated GTPase [Acinetobacter calcoaceticus PHEA-2]
gi|424055859|ref|ZP_17793382.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
nosocomialis Ab22222]
gi|425742615|ref|ZP_18860719.1| GTP-binding protein YchF [Acinetobacter baumannii WC-487]
gi|445432517|ref|ZP_21439262.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC021]
gi|298700577|gb|ADI91142.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
oleivorans DR1]
gi|325121927|gb|ADY81450.1| translation-associated GTPase [Acinetobacter calcoaceticus PHEA-2]
gi|407438350|gb|EKF44894.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
nosocomialis Ab22222]
gi|425486441|gb|EKU52809.1| GTP-binding protein YchF [Acinetobacter baumannii WC-487]
gi|444758813|gb|ELW83303.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC021]
Length = 363
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|260550653|ref|ZP_05824862.1| GTPase [Acinetobacter sp. RUH2624]
gi|260406364|gb|EEW99847.1| GTPase [Acinetobacter sp. RUH2624]
Length = 366
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 4 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKP 63
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 64 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 123
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 124 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 183
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 184 ADLSDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 243
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 244 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 303
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 304 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 363
Query: 361 FNI 363
FN+
Sbjct: 364 FNV 366
>gi|255319209|ref|ZP_05360426.1| GTP-binding protein YchF [Acinetobacter radioresistens SK82]
gi|421465005|ref|ZP_15913693.1| GTP-binding protein YchF [Acinetobacter radioresistens WC-A-157]
gi|255303602|gb|EET82802.1| GTP-binding protein YchF [Acinetobacter radioresistens SK82]
gi|400204267|gb|EJO35251.1| GTP-binding protein YchF [Acinetobacter radioresistens WC-A-157]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRIIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ LLT+KP +++ANV E+GF+NN LD ++ A +N ++ +C ++
Sbjct: 181 ADLSDDERKLVRGFGLLTLKPTMYIANVAEDGFENNPHLDAVRKLAEEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 ESEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYNDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|416029132|ref|ZP_11572021.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406654|ref|ZP_16483678.1| GTP-binding protein YchF [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320327399|gb|EFW83413.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330881890|gb|EGH16039.1| GTP-binding protein YchF [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 366
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 265/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|429212745|ref|ZP_19203910.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas sp.
M1]
gi|428157227|gb|EKX03775.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas sp.
M1]
Length = 366
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I ELI +DL EK + K + ++ +I LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEAIAQKALLEKLIAHFTAGKPARS 180
Query: 181 M--SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ + +EE ++ +LLT KP++++ANV E GF+NN LD ++ A + ++ +C
Sbjct: 181 LVKDMADEEKRLVRGFHLLTSKPVMYIANVAEEGFENNPHLDAVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNI-DKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ +K+ FL+++G++E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDDEEKQMFLESMGMEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVRI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ISY DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVISYDDFIQYKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|28868316|ref|NP_790935.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967232|ref|ZP_03395381.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato T1]
gi|301381032|ref|ZP_07229450.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. tomato Max13]
gi|302059359|ref|ZP_07250900.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. tomato K40]
gi|302134876|ref|ZP_07260866.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422659512|ref|ZP_16721937.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28851553|gb|AAO54630.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213928074|gb|EEB61620.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato T1]
gi|331018130|gb|EGH98186.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 366
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 265/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N++ I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|384426744|ref|YP_005636101.1| GTP-binding protein YchF [Xanthomonas campestris pv. raphani 756C]
gi|341935844|gb|AEL05983.1| GTP-binding protein YchF [Xanthomonas campestris pv. raphani 756C]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNELAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHADIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKEAAARKPVLAKLQAALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ NV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYICNVLEDGFENNPHLDAVRAHAAAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDTFLADLGLDEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYRGESGARDAGRLRLEGKEYRVKEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|289627926|ref|ZP_06460880.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|422584068|ref|ZP_16659183.1| GTP-binding protein YchF [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330868890|gb|EGH03599.1| GTP-binding protein YchF [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 366
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 265/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++N+E +I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMSNDEKATIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKEYVVKDGDVM 360
Query: 358 NFLFNI 363
+F N+
Sbjct: 361 HFRLNV 366
>gi|238897567|ref|YP_002923246.1| translation-associated GTPase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465324|gb|ACQ67098.1| translation-associated GTPase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 255/364 (70%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KC ++GLPNVGKSTLFNALT+ I A N+PFCTIEPN GI+ VPD RL+ L I++
Sbjct: 1 MGFKCAIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNKGIVPVPDLRLEQLEAIIQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K + ++ VDIAGLV GASKG+GLGN+FL+HIRET + V+RCF DD I H++G +N
Sbjct: 61 KSVVHTHMEFVDIAGLVKGASKGDGLGNQFLSHIRETEAIAQVVRCFDDDNIIHVAGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHS-IELLKLLKRIIFNLNKSIPIR 179
P D ++I TEL LSDL E+ +D+ KK ++ + IE L K + F L +R
Sbjct: 121 PGEDIDIINTELALSDLETCERALDRIQKKAKGGDQSAKIESTTLEKCLSF-LKPGKMLR 179
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ L EE ++ +LN LT+KP +++ANV ENGF+NN LD++ A + ++ +CA
Sbjct: 180 TLDLTKEEKNTVAYLNFLTLKPTMYIANVDENGFENNPHLDKVYQIAEKEKAVVVSVCAA 239
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E ++ +L ++ F+ +GL E LN +IRA + LL+L+TYFT G KE+RAWTIP G
Sbjct: 240 IEADLIELEEKERVAFMAYMGLTEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPIGA 299
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA QAAG IHTD ++GFIRA TIS+ DF+ ++GEQG K GKIRSEGK Y+V+DGDI+NF
Sbjct: 300 TAPQAAGKIHTDFEKGFIRAQTISFSDFIAFQGEQGAKEFGKIRSEGKNYIVQDGDIMNF 359
Query: 360 LFNI 363
LFN+
Sbjct: 360 LFNV 363
>gi|407791830|ref|ZP_11138908.1| GTP-binding protein YchF [Gallaecimonas xiamenensis 3-C-1]
gi|407198883|gb|EKE68909.1| GTP-binding protein YchF [Gallaecimonas xiamenensis 3-C-1]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDIRLNKLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G++N
Sbjct: 61 QRVLPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFENDNIIHVAGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ +++ + + KK ++ + +L +I +L +R
Sbjct: 121 PAEDIDVINTELVLADMEAVDRALTRVQKKAKGGDKEAKAEQDVLLKIQPHLEAGKMLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +I + N LT KP +++ANV E+GF+NN LD+++ A +++ ++ +CA +
Sbjct: 181 FGLSAEEKAAIGYQNYLTGKPTMYIANVNEDGFENNPYLDKVRAIAADEDAIVVPVCAAV 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L++ D++ F++ LGL E LN +IRA + LL+L TYFT G KE+RAWTI +T
Sbjct: 241 ESDIAELDDEDRQAFMEELGLDEPGLNRVIRAGYELLNLHTYFTAGVKEVRAWTIKVNST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y+DF+ GEQG K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYEDFVANNGEQGAKEAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|188992869|ref|YP_001904879.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. campestris str. B100]
gi|167734629|emb|CAP52839.1| GTP-binding protein [Xanthomonas campestris pv. campestris]
Length = 385
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 23 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNELAEIVKP 82
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++ +++
Sbjct: 83 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHADIIHVNNKVD 142
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 143 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKEAAARKPVLAKLQAALADGKAGRS 202
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ NV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 203 AGLDEEEKALVRDLFLLTLKPVMYICNVLEDGFENNPHLDAVRAHAATEGAEVVPVSAAI 262
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G +E+RAWT+ G+T
Sbjct: 263 EEELSQLDDADRDTFLADLGLDEPGLNRVIRAAYKLLGLQTYFTAGVREVRAWTVKAGST 322
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 323 APQAAAVIHTDFEKGFIRAETIAFDDFIKYRGESGARDAGRLRLEGKEYRVKEGDVLHFR 382
Query: 361 FNI 363
FN+
Sbjct: 383 FNV 385
>gi|312884091|ref|ZP_07743804.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368261|gb|EFP95800.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN GI+ VPD RL L NIV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALANIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKIIPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPILTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD +K YA ++N ++ +CA +
Sbjct: 181 VELAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVKEYAESENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L + D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPLGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ YKGE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIEYKGESGAKDAGKWRLEGKDYVVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|343510418|ref|ZP_08747651.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio scophthalmi
LMG 19158]
gi|343517484|ref|ZP_08754486.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio sp. N418]
gi|342793262|gb|EGU29065.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio sp. N418]
gi|342802331|gb|EGU37765.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio scophthalmi
LMG 19158]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L+ IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALSKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I + KK ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRNAKKAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL+++ +LN LT+KP +++ANV E+GF+NN LD + YA +N ++ +CA +
Sbjct: 181 VELSKEELLAVDYLNFLTLKPTMYIANVNEDGFENNPYLDAVCEYAAKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL ++G++E LN +IRA + LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDEEREEFLADMGIEEPGLNRVIRAGYELLELHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|262379712|ref|ZP_06072868.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262299169|gb|EEY87082.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 367
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 5 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 64
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 65 QRIIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 124
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 125 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 184
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ LLT+KP +++ANV E+GF+NN LD ++ A +N ++ +C ++
Sbjct: 185 ADLSDDERKLVRGFGLLTLKPTMYIANVAEDGFENNPHLDAVRKLAEEENAIVVPLCNQI 244
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 245 ESEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 304
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 305 APQAAGVIHTDFEKGFIRAEVVAYNDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVMHFR 364
Query: 361 FNI 363
FN+
Sbjct: 365 FNV 367
>gi|424741588|ref|ZP_18169932.1| GTP-binding protein YchF [Acinetobacter baumannii WC-141]
gi|422944646|gb|EKU39635.1| GTP-binding protein YchF [Acinetobacter baumannii WC-141]
Length = 363
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E ++ L+T+KP +++ANV E+GF+NN LD +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKLVRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|422297070|ref|ZP_16384714.1| GTP-binding protein YchF [Pseudomonas avellanae BPIC 631]
gi|422587444|ref|ZP_16662115.1| GTP-binding protein YchF [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|422654398|ref|ZP_16717141.1| GTP-binding protein YchF [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330873315|gb|EGH07464.1| GTP-binding protein YchF [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330967424|gb|EGH67684.1| GTP-binding protein YchF [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|407991612|gb|EKG33430.1| GTP-binding protein YchF [Pseudomonas avellanae BPIC 631]
Length = 366
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S+ N++ I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LMKSMGNDDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVRAIAEEEGAMLVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYVVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|359430509|ref|ZP_09221516.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp.
NBRC 100985]
gi|358234052|dbj|GAB03055.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp.
NBRC 100985]
Length = 363
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDSRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKEALATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN L+ ++ A +N ++ +C ++
Sbjct: 181 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVQKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYDDFIQYNGENGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421856340|ref|ZP_16288707.1| putative GTP-binding protein [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
gi|403188279|dbj|GAB74908.1| putative GTP-binding protein [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
Length = 363
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRIIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+L ++E ++ LLT+KP +++ANV E+GF+NN LD ++ A +N ++ +C ++
Sbjct: 181 ANLADDERKLVRGFGLLTLKPTMYIANVAEDGFENNPHLDAVRKLAEEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA ++LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 ESEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYNDFVQYNGEAGAKEAGKWRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|409393930|ref|ZP_11245201.1| GTP-binding protein YchF [Pseudomonas sp. Chol1]
gi|409394473|ref|ZP_11245670.1| GTP-binding protein YchF [Pseudomonas sp. Chol1]
gi|409120849|gb|EKM97181.1| GTP-binding protein YchF [Pseudomonas sp. Chol1]
gi|409121565|gb|EKM97647.1| GTP-binding protein YchF [Pseudomonas sp. Chol1]
Length = 366
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L +EE ++ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGDEEKRLVRGFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLGLQTYFTAGVKEVRAWTVKI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|402489054|ref|ZP_10835858.1| GTP-binding protein YchF [Rhizobium sp. CCGE 510]
gi|401812001|gb|EJT04359.1| GTP-binding protein YchF [Rhizobium sp. CCGE 510]
Length = 367
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L ++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRAIGKDKESMAMLPIMDASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L +E+ +K LNLLT P+++V NV E N + + + A Q ++I
Sbjct: 181 TLLSTLGADEIAILKSLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAVMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ Y GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKYNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|329929033|ref|ZP_08282835.1| GTP-binding protein YchF [Paenibacillus sp. HGF5]
gi|328937022|gb|EGG33451.1| GTP-binding protein YchF [Paenibacillus sp. HGF5]
Length = 366
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L CG++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V+
Sbjct: 1 MPLSCGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G++N
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I ELIL+DL +EK ID+ K N+ + ++LL+R+ L P R
Sbjct: 121 PVSDIQTINLELILADLDSVEKRIDRAKKNMKGGNKQYAQEVELLERLKEALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
+ L+++E + ++ L+LLT+KP+++ AN+ E+G +N + Q++ +A +N ++ I
Sbjct: 181 VELSDDEKLIVRDLHLLTLKPVLYAANLSEDGVAEADSNPYVQQVRDFAAAENAIVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL+E+ LN LI+A++SLL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKAMFLEELGLEESGLNRLIKAAYSLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IHTD +RGFIRA ++Y D + G K G++R EGK+Y+V DGD++
Sbjct: 301 GTKAPQAAGVIHTDFERGFIRAEVVAYDDLVAAGSMNGAKERGQLRLEGKEYVVNDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|21230349|ref|NP_636266.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769657|ref|YP_244419.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas
campestris pv. campestris str. 8004]
gi|21111903|gb|AAM40190.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574989|gb|AAY50399.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 363
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L IVK
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNELAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++ +++
Sbjct: 61 QKLIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHADIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I TEL L+DL +EK +++ + ++ + +L ++ L R
Sbjct: 121 PIADIETIDTELALADLDSVEKALNRAERSAKGGDKEAAARKPVLAKLQAALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ NV E+GF+NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYICNVLEDGFENNPHLDAVRAHAATEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G +E+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDTFLADLGLDEPGLNRVIRAAYKLLGLQTYFTAGVREVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI++ DF+ Y+GE G ++AG++R EGK+Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAFDDFIKYRGESGARDAGRLRLEGKEYRVKEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398969067|ref|ZP_10682680.1| GTP-binding protein YchF [Pseudomonas sp. GM30]
gi|398142761|gb|EJM31652.1| GTP-binding protein YchF [Pseudomonas sp. GM30]
Length = 366
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIAHFTEAKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMSADEKSVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|343505043|ref|ZP_08742693.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio
ichthyoenteri ATCC 700023]
gi|342809085|gb|EGU44211.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio
ichthyoenteri ATCC 700023]
Length = 363
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L+ IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALSKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I + KK ++ + + +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRNAKKAKGGDKDAKFEITVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LN LT+KP +++ANV E+GF+NN LD + YA +N ++ +CA +
Sbjct: 181 VELAKEELLAVDYLNFLTLKPTMYIANVNEDGFENNPYLDAVCEYAAKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+++L + +++ FL ++G++E LN +IRA + LL+L TYFT G KE+RAWTIP G T
Sbjct: 241 ESEMAELEDEEREEFLADMGIEEPGLNRVIRAGYELLELHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGKIHTDFEKGFIRAEVVGYDDFIQFNGESGAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|149907586|ref|ZP_01896333.1| putative GTP-binding protein [Moritella sp. PE36]
gi|149809256|gb|EDM69185.1| putative GTP-binding protein [Moritella sp. PE36]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I A N+PFCTIEPN G++ VPDKRL L+ IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDKRLDALSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++ +I+
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVNNKIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL L+DL EK + + KK ++ + L ++++I+ +L + +R
Sbjct: 121 PLDDIEIINTELALADLDSCEKVVVRLAKKAKGGDKDAKFELPVIEKILAHLAEGEMVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L +E +I ++N LT+KP +++ANV E GF+NN LDQ++ A +N ++ ICA +
Sbjct: 181 LELTKDEKAAIDYMNFLTLKPTMYIANVDEEGFENNPHLDQVRELAATENAVVVAICASM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E +I++L + ++ F++++G++E LN +IRA + LL L+TYFT G KE+RAWTIP T
Sbjct: 241 ESDIAELEDDERAEFMEDMGIEEPGLNRVIRAGYELLTLQTYFTAGVKEVRAWTIPVNAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y F+ Y GE G K AG+ R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDSFIEYNGEAGAKTAGQWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|146306086|ref|YP_001186551.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
mendocina ymp]
gi|421504246|ref|ZP_15951189.1| GTP-binding protein YchF [Pseudomonas mendocina DLHK]
gi|145574287|gb|ABP83819.1| GTP-binding protein YchF [Pseudomonas mendocina ymp]
gi|400345016|gb|EJO93383.1| GTP-binding protein YchF [Pseudomonas mendocina DLHK]
Length = 366
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ S+ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKESVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L L ++E K +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKDLGDDEKRLAKTFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAKEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G++E LN +IRA +SLL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ++Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVVAYDDFIAYKGEGGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|56460040|ref|YP_155321.1| GTP-dependent nucleic acid-binding protein EngD [Idiomarina
loihiensis L2TR]
gi|56179050|gb|AAV81772.1| Predicted GTPase, probable translation factor [Idiomarina
loihiensis L2TR]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +CG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFRCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+DD I H+SG I+
Sbjct: 61 ERVIPTTMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDDNIVHVSGGID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D + I TEL L+DL ++K + + +KK + + + +L+++ L++ R
Sbjct: 121 PADDIDTINTELALADLDSVDKSLYRLSKKAKGGDSQAKAEIAVLEKLKPALDEGQMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ +E +I+ NLLT+KP +++ANV E+GF+NN LD+++ A +N ++ +CA +
Sbjct: 181 VELSKDERATIRSYNLLTLKPTMYIANVNEDGFENNPHLDKVREIAATENAVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ DK+ FL LG E LN +IR + LL+L TYFT G KE+RAWT+ G+T
Sbjct: 241 ESEIAELDEADKEEFLSELGQDEPGLNRVIRGGYELLNLHTYFTAGVKEVRAWTVKVGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y D++ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGRIHTDFEKGFIRAEIVGYDDYIANNGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|290969065|ref|ZP_06560600.1| GTP-binding protein YchF [Megasphaera genomosp. type_1 str. 28L]
gi|290781021|gb|EFD93614.1| GTP-binding protein YchF [Megasphaera genomosp. type_1 str. 28L]
Length = 368
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 258/365 (70%), Gaps = 3/365 (0%)
Query: 2 NLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTK 61
NL+ G++GLPNVGKSTLFNA+TK A NYPFCTIEPN+G++EVPD RL+ L ++ K
Sbjct: 4 NLEVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDTRLRTLTDMYHPK 63
Query: 62 KIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINP 121
K PA+++ VDIAGLV+GASKGEGLGNKFL+HIRET+ + V+RCF+DD ITH+SG ++P
Sbjct: 64 KTIPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDDNITHVSGSVDP 123
Query: 122 IHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLM 181
+ D ++I TEL L+DL +++ +D+ K ++ + L +L++I+ L P+R +
Sbjct: 124 LRDIDIINTELCLADLETVQRRVDRLAKIAQCGDKAAKAELAVLQKILTALEAGEPVRKV 183
Query: 182 SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIICA 238
+L +EE ++K LNLLTIKPI+++ANV E+ N L+ +L +A + ++ + A
Sbjct: 184 ALQDEEKQTVKELNLLTIKPILYIANVAEDEAAQPDANPLVQKLTAFAAAEGAQVVAVSA 243
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI++L + + FL+ LGL E+ L LI+A +SLL L +FT G E+RAWTI G
Sbjct: 244 KIEAEIAELPDDEAAAFLEELGLSESGLTKLIKAGYSLLGLINFFTAGADEVRAWTIVKG 303
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A++AAG IHTDI+RGFIRA +SY D + GEQ K G +R EGK+YL++DGD+
Sbjct: 304 TKAQKAAGKIHTDIERGFIRAEIVSYTDLIACGGEQAAKEKGLVRLEGKEYLMQDGDVTY 363
Query: 359 FLFNI 363
F FN+
Sbjct: 364 FRFNV 368
>gi|260772284|ref|ZP_05881200.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
metschnikovii CIP 69.14]
gi|260611423|gb|EEX36626.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio
metschnikovii CIP 69.14]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTNAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I ++ K+ ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRQTKRAKGGDKDAKFELGVLEKLLPVLTEGGSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL ++ +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VPLSKEELAAVGYLNFLTLKPTMYIANVNEDGFENNPYLDAVRAHAAQENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LLDL+TYFT G KE+RAWT+P G T
Sbjct: 241 EAELSELEEEERAEFLADLGIEEPGLNRVIRSGYELLDLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y DF+ Y+GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDFIQYQGESGAKEAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|261409699|ref|YP_003245940.1| GTP-binding protein YchF [Paenibacillus sp. Y412MC10]
gi|261286162|gb|ACX68133.1| GTP-binding protein YchF [Paenibacillus sp. Y412MC10]
Length = 366
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V+
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G++N
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I ELIL+DL +EK ID+ K N+ + ++LL+R+ L P R
Sbjct: 121 PVSDIQTINLELILADLDSVEKRIDRAKKNMKGGNKQYAQEVELLERLKEALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
+ L+++E + ++ L+LLT+KP+++ AN+ E+G +N + Q++ +A +N ++ I
Sbjct: 181 VELSDDEKLIVRDLHLLTLKPVLYAANLSEDGVAEADSNPYVQQVRDFAAAENAIVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL+E+ LN LI+A++SLL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKAMFLEELGLEESGLNRLIKAAYSLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IHTD +RGFIRA ++Y D + G K G++R EGK+Y+V DGD++
Sbjct: 301 GTKAPQAAGVIHTDFERGFIRAEVVAYDDLVAAGSMNGAKERGQLRLEGKEYVVNDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|307544464|ref|YP_003896943.1| translation-associated GTPase [Halomonas elongata DSM 2581]
gi|307216488|emb|CBV41758.1| translation-associated GTPase [Halomonas elongata DSM 2581]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF +D + H+S +++
Sbjct: 61 QKVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFDNDNVIHVSNQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +E+ I + + ++ +I +L RI +L + P+R
Sbjct: 121 PRADIETINLELALADLDTVERAIQRLARVVKGGDKEAIATKAILDRIQPHLAEGQPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +K LLT+KP +++ANV E+GF+NN LD + A + ++ +C ++
Sbjct: 181 FGLDDDEKHQLKSFGLLTLKPTMYIANVNEDGFENNPYLDTVNEIAAEEGAVVVPVCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FLD +G++E L+ +IRA ++LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDEERAMFLDEMGMEEPGLDRVIRAGYALLGLQTYFTAGVKEVRAWTVKIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A + AG+IHTD ++GFIRA ++Y DF+ GEQG K+AGK R EGK Y+++DGD+++F
Sbjct: 301 APEGAGVIHTDFQKGFIRAEVVAYDDFVALGGEQGAKDAGKWRLEGKDYVLKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|424924889|ref|ZP_18348250.1| YchF [Pseudomonas fluorescens R124]
gi|404306049|gb|EJZ60011.1| YchF [Pseudomonas fluorescens R124]
Length = 366
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMSADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|226946189|ref|YP_002801262.1| GTP-dependent nucleic acid-binding protein EngD [Azotobacter
vinelandii DJ]
gi|226721116|gb|ACO80287.1| Conserved hypothetical GTP-binding protein [Azotobacter vinelandii
DJ]
Length = 366
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVVRSAKGGDKEALAQKSLLEKLIPHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++E+ ++ +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMRGMDDEQKRIVRGFHLLTSKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNI-DKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ +K+ FL+++G++E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDDEEKQMFLESMGMEEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTVKI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|254292271|ref|ZP_04963023.1| GTP-binding protein [Vibrio cholerae AM-19226]
gi|150421814|gb|EDN13809.1| GTP-binding protein [Vibrio cholerae AM-19226]
Length = 383
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 141 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N P++ +CA +
Sbjct: 201 VNLTKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENAPVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|404399178|ref|ZP_10990762.1| GTP-binding protein YchF [Pseudomonas fuscovaginae UPB0736]
Length = 366
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 265/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLQALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLESCEKQLQKVARNAKGGDKEAVVQKGLLEQLITHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMSVDEKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAAEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|395650298|ref|ZP_10438148.1| GTP-binding protein YchF [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 366
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALALIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E ++K +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKTMGADEKAAVKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|423097291|ref|ZP_17085087.1| GTP-binding protein YchF [Pseudomonas fluorescens Q2-87]
gi|397885662|gb|EJL02145.1| GTP-binding protein YchF [Pseudomonas fluorescens Q2-87]
Length = 366
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E + IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMGTDEKLVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYSDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|423689818|ref|ZP_17664338.1| GTP-binding protein YchF [Pseudomonas fluorescens SS101]
gi|388000705|gb|EIK62034.1| GTP-binding protein YchF [Pseudomonas fluorescens SS101]
Length = 366
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L+ IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|421351907|ref|ZP_15802272.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-25]
gi|395952352|gb|EJH62966.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-25]
Length = 363
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N P++ +CA +
Sbjct: 181 VNLTKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENAPVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|448747300|ref|ZP_21728960.1| Hypothetical protein HALTITAN_1978 [Halomonas titanicae BH1]
gi|445564992|gb|ELY21105.1| Hypothetical protein HALTITAN_1978 [Halomonas titanicae BH1]
Length = 363
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 254/363 (69%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKTLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +EK + + ++ +I +L RI ++ + +P+R
Sbjct: 121 PRADIETINLELALADLDTVEKASQRLVRSVKGGDKEAIATKAILDRIQPHVAEGLPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K LT+KP +++ANV E+GF+NN LD + A + ++ +C +L
Sbjct: 181 FGLSEEEQRQVKSFGFLTLKPTMYIANVNEDGFENNPYLDIVNEIAAEEGALVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FL +G+ E L+ +IRA +SLL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDEERSMFLSEMGMDEPGLDRVIRAGYSLLGLQTYFTAGVKEVRAWTVKEGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA ++Y+DF+ GEQ K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVVAYEDFVSLGGEQAAKDAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|71282262|ref|YP_270234.1| GTP-dependent nucleic acid-binding protein EngD [Colwellia
psychrerythraea 34H]
gi|71148002|gb|AAZ28475.1| GTP-binding protein YchF [Colwellia psychrerythraea 34H]
Length = 363
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIDAANFPFCTIEPNTGVVPVPDPRLDKLTAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF +D I H++ +++
Sbjct: 61 ERVLATTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIIHVANKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D +VI TEL LSD+ E+ I + KK ++ + + +L++I+ ++ + +R
Sbjct: 121 PVDDIDVINTELALSDMDTAERAIFRLAKKAKGGDKDAKFEMPVLEKILKHVEEGHMVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE ++ +LN LT+KP +++ANV ++GF+NN LD+++ A + ++ +CA++
Sbjct: 181 LELSKEEKAAVDYLNFLTLKPTMYIANVNDDGFENNPYLDEVQKIADAEGAIVVAVCAEI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S++++ D+ F+ +LGL+E LN +I A +SLL L+TYFT G KE+RAWT+ T
Sbjct: 241 ESELSEMDDEDRVEFMADLGLEEPGLNRVINAGYSLLHLQTYFTAGVKEVRAWTVKQNAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ISY DF+ + GE G K AGK R EGK+Y V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEIISYDDFIEFNGESGAKEAGKWRLEGKEYRVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|398876007|ref|ZP_10631167.1| GTP-binding protein YchF [Pseudomonas sp. GM67]
gi|398882386|ref|ZP_10637354.1| GTP-binding protein YchF [Pseudomonas sp. GM60]
gi|398198928|gb|EJM85878.1| GTP-binding protein YchF [Pseudomonas sp. GM60]
gi|398205299|gb|EJM92083.1| GTP-binding protein YchF [Pseudomonas sp. GM67]
Length = 366
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|218674103|ref|ZP_03523772.1| translation-associated GTPase [Rhizobium etli GR56]
Length = 367
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ EE+ +K LNLLT P+++V NV E N + + A Q ++I
Sbjct: 181 TLLSTLDAEEIAILKGLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAAMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ + GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKFNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|399002452|ref|ZP_10705138.1| GTP-binding protein YchF [Pseudomonas sp. GM18]
gi|398124892|gb|EJM14388.1| GTP-binding protein YchF [Pseudomonas sp. GM18]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAVIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMSADEKQVIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|440739080|ref|ZP_20918602.1| GTP-binding protein YchF [Pseudomonas fluorescens BRIP34879]
gi|447915099|ref|YP_007395667.1| GTP-binding protein YchF [Pseudomonas poae RE*1-1-14]
gi|440380452|gb|ELQ17019.1| GTP-binding protein YchF [Pseudomonas fluorescens BRIP34879]
gi|445198962|gb|AGE24171.1| GTP-binding protein YchF [Pseudomonas poae RE*1-1-14]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGVDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398889381|ref|ZP_10643224.1| GTP-binding protein YchF [Pseudomonas sp. GM55]
gi|398189503|gb|EJM76777.1| GTP-binding protein YchF [Pseudomonas sp. GM55]
Length = 366
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLQALAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|338997714|ref|ZP_08636407.1| GTP-binding protein YchF [Halomonas sp. TD01]
gi|338765396|gb|EGP20335.1| GTP-binding protein YchF [Halomonas sp. TD01]
Length = 363
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 255/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +EK + + ++ + +L RI +L + +P+R
Sbjct: 121 PRADIETINLELALADLDTVEKASQRLVRSVKGGDKDATATKAILDRIQPHLAEGMPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E +K LT+KP +++ANV E+GF+NN LD + A + ++ +C +L
Sbjct: 181 FGLDEDEKRQVKSFGFLTLKPTMYIANVNEDGFENNPYLDIVNEIAAEEGAAVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FL +G++E L+ +IRA ++LL L+TYFT G KE+RAWT+ G +
Sbjct: 241 EAEIAELDDEERSMFLAEMGMEEPGLDRVIRAGYALLGLQTYFTAGVKEVRAWTVKEGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA ++Y+DF+ GEQG K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVVAYEDFVSLNGEQGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|312958842|ref|ZP_07773361.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens
WH6]
gi|311286612|gb|EFQ65174.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens
WH6]
Length = 366
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|405382030|ref|ZP_11035852.1| GTP-binding protein YchF [Rhizobium sp. CF142]
gi|397321518|gb|EJJ25934.1| GTP-binding protein YchF [Rhizobium sp. CF142]
Length = 367
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD+R++ L NI K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDERMQKLANIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKEIIPTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDGDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + L P+R
Sbjct: 121 DPVADAETIETELMLADLDSLERRTEQTRKRATGKDKDSMAMLPIMEASLALLQDGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L+ EE +K LNLLT P+++V NV E + N + + A Q + I
Sbjct: 181 TLLSKLDAEETTILKGLNLLTSHPVLYVCNVAEGDAATGNQYTEAVAAMAKAQGAETVTI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + K FL LGL E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPDEEAKEFLSALGLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ + GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIQFGGEVGAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|184157841|ref|YP_001846180.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii ACICU]
gi|213157036|ref|YP_002319081.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB0057]
gi|215483685|ref|YP_002325906.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii AB307-0294]
gi|239504034|ref|ZP_04663344.1| translation-associated GTPase [Acinetobacter baumannii AB900]
gi|301346799|ref|ZP_07227540.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB056]
gi|301511723|ref|ZP_07236960.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB058]
gi|301596979|ref|ZP_07241987.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB059]
gi|332855472|ref|ZP_08435892.1| GTP-binding protein YchF [Acinetobacter baumannii 6013150]
gi|332866631|ref|ZP_08437118.1| GTP-binding protein YchF [Acinetobacter baumannii 6013113]
gi|332872482|ref|ZP_08440452.1| GTP-binding protein YchF [Acinetobacter baumannii 6014059]
gi|384131936|ref|YP_005514548.1| Putative GTP-binding protein [Acinetobacter baumannii 1656-2]
gi|385237232|ref|YP_005798571.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii TCDC-AB0715]
gi|387124201|ref|YP_006290083.1| GTP-binding protein YchF [Acinetobacter baumannii MDR-TJ]
gi|403677138|ref|ZP_10938944.1| GTP-binding protein YchF [Acinetobacter sp. NCTC 10304]
gi|407932550|ref|YP_006848193.1| GTP-binding protein YchF [Acinetobacter baumannii TYTH-1]
gi|416145965|ref|ZP_11600815.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB210]
gi|417547115|ref|ZP_12198201.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC032]
gi|417547745|ref|ZP_12198827.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-18]
gi|417553186|ref|ZP_12204256.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-81]
gi|417561522|ref|ZP_12212401.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC137]
gi|417563693|ref|ZP_12214567.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC143]
gi|417568098|ref|ZP_12218961.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC189]
gi|417573813|ref|ZP_12224667.1| GTP-binding protein YchF [Acinetobacter baumannii Canada BC-5]
gi|417578774|ref|ZP_12229607.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-17]
gi|417869761|ref|ZP_12514741.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH1]
gi|417873223|ref|ZP_12518099.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH2]
gi|417878635|ref|ZP_12523244.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH3]
gi|417883249|ref|ZP_12527503.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH4]
gi|421197872|ref|ZP_15655041.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC109]
gi|421204537|ref|ZP_15661658.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AC12]
gi|421456205|ref|ZP_15905548.1| GTP-binding protein YchF [Acinetobacter baumannii IS-123]
gi|421536429|ref|ZP_15982675.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AC30]
gi|421622055|ref|ZP_16062965.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC074]
gi|421624774|ref|ZP_16065638.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC098]
gi|421629437|ref|ZP_16070169.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC180]
gi|421632797|ref|ZP_16073442.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-13]
gi|421644923|ref|ZP_16085397.1| GTP-binding protein YchF [Acinetobacter baumannii IS-235]
gi|421648479|ref|ZP_16088882.1| GTP-binding protein YchF [Acinetobacter baumannii IS-251]
gi|421652988|ref|ZP_16093336.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC0162]
gi|421653438|ref|ZP_16093771.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-72]
gi|421657123|ref|ZP_16097398.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-83]
gi|421661764|ref|ZP_16101934.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC110]
gi|421668835|ref|ZP_16108868.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC087]
gi|421669988|ref|ZP_16109999.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC099]
gi|421676555|ref|ZP_16116462.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC065]
gi|421678646|ref|ZP_16118530.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC111]
gi|421687611|ref|ZP_16127332.1| GTP-binding protein YchF [Acinetobacter baumannii IS-143]
gi|421691054|ref|ZP_16130718.1| GTP-binding protein YchF [Acinetobacter baumannii IS-116]
gi|421697035|ref|ZP_16136614.1| GTP-binding protein YchF [Acinetobacter baumannii WC-692]
gi|421699521|ref|ZP_16139045.1| GTP-binding protein YchF [Acinetobacter baumannii IS-58]
gi|421703366|ref|ZP_16142830.1| GTP-binding protein YchF [Acinetobacter baumannii ZWS1122]
gi|421707089|ref|ZP_16146489.1| GTP-binding protein YchF [Acinetobacter baumannii ZWS1219]
gi|421788213|ref|ZP_16224522.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-82]
gi|421791155|ref|ZP_16227339.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-2]
gi|421798424|ref|ZP_16234446.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-21]
gi|421798584|ref|ZP_16234601.1| GTP-binding protein YchF [Acinetobacter baumannii Canada BC1]
gi|421804930|ref|ZP_16240826.1| GTP-binding protein YchF [Acinetobacter baumannii WC-A-694]
gi|421809204|ref|ZP_16245044.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC035]
gi|424052635|ref|ZP_17790167.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab11111]
gi|424060168|ref|ZP_17797659.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab33333]
gi|424064115|ref|ZP_17801600.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab44444]
gi|425748905|ref|ZP_18866887.1| GTP-binding protein YchF [Acinetobacter baumannii WC-348]
gi|425751752|ref|ZP_18869694.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-113]
gi|445406667|ref|ZP_21431944.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-57]
gi|445445763|ref|ZP_21443204.1| GTP-binding protein YchF [Acinetobacter baumannii WC-A-92]
gi|445458869|ref|ZP_21447409.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC047]
gi|445469493|ref|ZP_21451150.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC338]
gi|445475563|ref|ZP_21453453.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-78]
gi|445488674|ref|ZP_21458283.1| GTP-binding protein YchF [Acinetobacter baumannii AA-014]
gi|183209435|gb|ACC56833.1| predicted GTPase, probable translation factor [Acinetobacter
baumannii ACICU]
gi|193077132|gb|ABO11909.2| putative GTP-binding protein [Acinetobacter baumannii ATCC 17978]
gi|213056196|gb|ACJ41098.1| GTP-binding protein YchF [Acinetobacter baumannii AB0057]
gi|213987424|gb|ACJ57723.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii AB307-0294]
gi|322508156|gb|ADX03610.1| Putative GTP-binding protein [Acinetobacter baumannii 1656-2]
gi|323517730|gb|ADX92111.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii TCDC-AB0715]
gi|332727446|gb|EGJ58876.1| GTP-binding protein YchF [Acinetobacter baumannii 6013150]
gi|332734505|gb|EGJ65618.1| GTP-binding protein YchF [Acinetobacter baumannii 6013113]
gi|332739288|gb|EGJ70145.1| GTP-binding protein YchF [Acinetobacter baumannii 6014059]
gi|333366524|gb|EGK48538.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AB210]
gi|342229633|gb|EGT94492.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH1]
gi|342231930|gb|EGT96722.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH2]
gi|342232279|gb|EGT97059.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH3]
gi|342236146|gb|EGU00688.1| GTP-binding protein YchF [Acinetobacter baumannii ABNIH4]
gi|385878693|gb|AFI95788.1| GTP-binding protein YchF [Acinetobacter baumannii MDR-TJ]
gi|395524104|gb|EJG12193.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC137]
gi|395554393|gb|EJG20395.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC189]
gi|395555449|gb|EJG21450.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC143]
gi|395566378|gb|EJG28021.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC109]
gi|395567912|gb|EJG28586.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-17]
gi|398325940|gb|EJN42097.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AC12]
gi|400209381|gb|EJO40351.1| GTP-binding protein YchF [Acinetobacter baumannii Canada BC-5]
gi|400211303|gb|EJO42266.1| GTP-binding protein YchF [Acinetobacter baumannii IS-123]
gi|400385003|gb|EJP43681.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC032]
gi|400389494|gb|EJP52565.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-18]
gi|400393445|gb|EJP60491.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-81]
gi|404560768|gb|EKA66010.1| GTP-binding protein YchF [Acinetobacter baumannii WC-692]
gi|404563205|gb|EKA68415.1| GTP-binding protein YchF [Acinetobacter baumannii IS-116]
gi|404564411|gb|EKA69591.1| GTP-binding protein YchF [Acinetobacter baumannii IS-143]
gi|404571222|gb|EKA76282.1| GTP-binding protein YchF [Acinetobacter baumannii IS-58]
gi|404668120|gb|EKB36029.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab33333]
gi|404671192|gb|EKB39048.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab11111]
gi|404673496|gb|EKB41282.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter
baumannii Ab44444]
gi|407192377|gb|EKE63557.1| GTP-binding protein YchF [Acinetobacter baumannii ZWS1122]
gi|407192778|gb|EKE63953.1| GTP-binding protein YchF [Acinetobacter baumannii ZWS1219]
gi|407901131|gb|AFU37962.1| GTP-binding protein YchF [Acinetobacter baumannii TYTH-1]
gi|408503937|gb|EKK05689.1| GTP-binding protein YchF [Acinetobacter baumannii IS-235]
gi|408504405|gb|EKK06156.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC0162]
gi|408512791|gb|EKK14429.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-72]
gi|408515313|gb|EKK16901.1| GTP-binding protein YchF [Acinetobacter baumannii IS-251]
gi|408696569|gb|EKL42102.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC074]
gi|408700468|gb|EKL45919.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC098]
gi|408701423|gb|EKL46852.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC180]
gi|408707905|gb|EKL53184.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-13]
gi|408714265|gb|EKL59417.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-83]
gi|408715256|gb|EKL60384.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC110]
gi|409985680|gb|EKO41887.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AC30]
gi|410378969|gb|EKP31578.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC087]
gi|410379622|gb|EKP32225.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC065]
gi|410386950|gb|EKP39412.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC099]
gi|410392209|gb|EKP44571.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC111]
gi|410394288|gb|EKP46624.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-21]
gi|410403651|gb|EKP55734.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-2]
gi|410403655|gb|EKP55737.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-82]
gi|410410315|gb|EKP62229.1| GTP-binding protein YchF [Acinetobacter baumannii WC-A-694]
gi|410412575|gb|EKP64432.1| GTP-binding protein YchF [Acinetobacter baumannii Canada BC1]
gi|410414988|gb|EKP66780.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC035]
gi|425489886|gb|EKU56187.1| GTP-binding protein YchF [Acinetobacter baumannii WC-348]
gi|425499759|gb|EKU65790.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-113]
gi|444760958|gb|ELW85386.1| GTP-binding protein YchF [Acinetobacter baumannii WC-A-92]
gi|444767510|gb|ELW91757.1| GTP-binding protein YchF [Acinetobacter baumannii AA-014]
gi|444774155|gb|ELW98243.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC338]
gi|444775278|gb|ELW99348.1| GTP-binding protein YchF [Acinetobacter baumannii OIFC047]
gi|444778902|gb|ELX02902.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-78]
gi|444781314|gb|ELX05233.1| GTP-binding protein YchF [Acinetobacter baumannii Naval-57]
gi|452953474|gb|EME58893.1| GTP-binding protein YchF [Acinetobacter baumannii MSP4-16]
Length = 363
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E I+ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 181 ADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|268315605|ref|YP_003289324.1| GTP-binding protein YchF [Rhodothermus marinus DSM 4252]
gi|262333139|gb|ACY46936.1| GTP-binding protein YchF [Rhodothermus marinus DSM 4252]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNAL++ + NYPFCTIEPN+G++ VPD+RL+ L + +
Sbjct: 1 MPLRCGIVGLPNVGKSTLFNALSRAGAESANYPFCTIEPNVGVVPVPDERLERLAELAGS 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+ P I+ VDIAGLV+GASKGEGLGN+FLAHIRE + ++HV+RCF+D I H+SG ++
Sbjct: 61 AKVTPTTIEFVDIAGLVAGASKGEGLGNQFLAHIREVDAILHVVRCFEDPNIVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+IQTEL+L DL +E+ I++ + ++ E L +R+ +L+ P RL
Sbjct: 121 PARDIEIIQTELLLKDLETVERRIERTARAAKSGDKKLREELAFYERLRDHLSSGAPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
++++ E ++ L LLT+KP+++VANV E+ + N + ++ A + +++IC
Sbjct: 181 FTVSDLEAPWLRSLFLLTVKPVLYVANVAESDLPEGEGNPHVATVREIAEKEGAQVVVIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A+LE ++++L+ +++ FL LGL+ L L+RA++ LL L T+FTVG KE RAWTI
Sbjct: 241 AELEAQLAELDEEERRAFLKELGLERPGLERLVRAAYELLGLITFFTVGPKEARAWTIRR 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A+QAAGIIH+D +RGFIRA TISY+D++ Y E + AG +RSEG+ Y+V+DGD++
Sbjct: 301 GTRAQQAAGIIHSDFERGFIRAETISYEDYIRYGSEAAAREAGAMRSEGRDYVVQDGDVI 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 LFRFNV 366
>gi|315649893|ref|ZP_07902975.1| GTP-binding protein YchF [Paenibacillus vortex V453]
gi|315274692|gb|EFU38074.1| GTP-binding protein YchF [Paenibacillus vortex V453]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 258/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V+
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G++N
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I ELIL+DL +EK ID+ K N+ + ++LL+R+ L P R
Sbjct: 121 PVSDIQTINLELILADLDSVEKRIDRAKKNMKGGNKQYAQEVELLERLKEALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
+ L+++E + ++ L+LLT+KP+++ AN+ E+G +N + Q++ +A +N ++ I
Sbjct: 181 VELSDDEKLIVRDLHLLTLKPVLYAANLSEDGVAEADSNPYVQQVRDFAAAENAIVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL+E+ LN LI+A++SLL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKAMFLEELGLEESGLNRLIKAAYSLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAA +IHTD +RGFIRA ++Y D + G K G++R EGK+Y+V DGD++
Sbjct: 301 GTKAPQAAAVIHTDFERGFIRAEVVAYDDLVAAGSMNGAKERGQLRLEGKEYVVSDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|307244835|ref|ZP_07526934.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247010|ref|ZP_07529064.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249233|ref|ZP_07531230.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251555|ref|ZP_07533462.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307256055|ref|ZP_07537843.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307260486|ref|ZP_07542180.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307262616|ref|ZP_07544246.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306854280|gb|EFM86486.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856462|gb|EFM88611.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858757|gb|EFM90816.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306861019|gb|EFM93025.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306865477|gb|EFM97372.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306869798|gb|EFN01581.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306872039|gb|EFN03753.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 356
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/356 (50%), Positives = 261/356 (73%)
Query: 8 IGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKKIFPAI 67
+GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK +++ P
Sbjct: 1 MGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLPTT 60
Query: 68 IKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPIHDAEV 127
++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+P D E+
Sbjct: 61 MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPADDIEI 120
Query: 128 IQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMSLNNEE 187
I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR + L+ +E
Sbjct: 121 INTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRSVDLDKDE 180
Query: 188 LMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEEEISDL 247
L +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +E EI++L
Sbjct: 181 LHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAIESEIAEL 240
Query: 248 NNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAEQAAGI 307
++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G TA +AA +
Sbjct: 241 DDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGATAPKAAAV 300
Query: 308 IHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFNI 363
IHTD ++GFIRA I+Y DF+ +KGE G K+AGK R EGK Y+V+DGD+++F FN+
Sbjct: 301 IHTDFEKGFIRAEVIAYDDFIQFKGENGAKDAGKWRLEGKDYIVQDGDVMHFRFNV 356
>gi|398866173|ref|ZP_10621673.1| GTP-binding protein YchF [Pseudomonas sp. GM78]
gi|398241510|gb|EJN27160.1| GTP-binding protein YchF [Pseudomonas sp. GM78]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|169796230|ref|YP_001714023.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii AYE]
gi|260555292|ref|ZP_05827513.1| GTPase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|384142928|ref|YP_005525638.1| putative GTP-binding protein [Acinetobacter baumannii MDR-ZJ06]
gi|169149157|emb|CAM87036.1| putative GTP-binding protein [Acinetobacter baumannii AYE]
gi|260411834|gb|EEX05131.1| GTPase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|347593421|gb|AEP06142.1| putative GTP-binding protein [Acinetobacter baumannii MDR-ZJ06]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 4 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 63
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 64 QRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 123
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 124 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 183
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E I+ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 184 ADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 243
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 244 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT 303
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 304 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 363
Query: 361 FNI 363
FN+
Sbjct: 364 FNV 366
>gi|254787720|ref|YP_003075149.1| GTP-dependent nucleic acid-binding protein EngD [Teredinibacter
turnerae T7901]
gi|237685487|gb|ACR12751.1| GTP-binding protein YchF [Teredinibacter turnerae T7901]
Length = 363
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ I A+N+PFCTIEPN G++ VPD R L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTQAGIDAQNFPFCTIEPNAGVVAVPDPRQDKLAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF D + H+ G IN
Sbjct: 61 ERIVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDPNVIHVDGRIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D EVI TEL L+DL +EK + + +K +++++I + LL+ I+ +LN+++P+R
Sbjct: 121 PASDIEVINTELALADLDTVEKALQRYSKAAKGQDKNAIAMKALLEEILPHLNEALPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ + +K LNLLT+KP +++ANV+E+GFK+N LLD + A + ++ IC K+
Sbjct: 181 FGLDEDRKKKLKELNLLTLKPTMYIANVEEDGFKHNPLLDAVMAIAEEEEAIVVPICNKM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ +K FL+ +G++E LN +IRA + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAEIAELDEEEKVEFLEEMGMEEPGLNRVIRAGYDLLGLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEIVAYDDFVQYNGEAGAKEAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|408483929|ref|ZP_11190148.1| GTP-binding protein YchF [Pseudomonas sp. R81]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKTMGADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398850717|ref|ZP_10607415.1| GTP-binding protein YchF [Pseudomonas sp. GM80]
gi|398985049|ref|ZP_10690876.1| GTP-binding protein YchF [Pseudomonas sp. GM24]
gi|399013292|ref|ZP_10715602.1| GTP-binding protein YchF [Pseudomonas sp. GM16]
gi|398114231|gb|EJM04063.1| GTP-binding protein YchF [Pseudomonas sp. GM16]
gi|398154652|gb|EJM43118.1| GTP-binding protein YchF [Pseudomonas sp. GM24]
gi|398248178|gb|EJN33602.1| GTP-binding protein YchF [Pseudomonas sp. GM80]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIAHFTEAKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMKNMSADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|387891949|ref|YP_006322246.1| GTP-binding protein YchF [Pseudomonas fluorescens A506]
gi|387164001|gb|AFJ59200.1| GTP-binding protein YchF [Pseudomonas fluorescens A506]
Length = 366
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIADEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|85702765|ref|ZP_01033869.1| GTP-binding protein YchF [Roseovarius sp. 217]
gi|85671693|gb|EAQ26550.1| GTP-binding protein YchF [Roseovarius sp. 217]
Length = 365
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL +EK +K ++ +++ +LL + L + P R
Sbjct: 121 DPVADADTIETELMLADLESVEKRRAGLQRKIKGGDKDAVQAERLLAQAQAALEQGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ E+ + K L LLT KPI++V NV E N N D + A +Q ++I A
Sbjct: 181 TVQVDAEDTKAWKMLQLLTAKPILYVCNVDEANAATGNAHSDAVAKMAADQGAASVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL +GL E L+ LIRA + LL L TYFTVG KE RAWTIP G
Sbjct: 241 QIEEEISKLEPDEAEMFLTEMGLDEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIPAG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A +AAG+IH D +RGFIRA TI+Y DF+ GEQ K+AGK+RSEGK Y+V+DGD+L+
Sbjct: 301 TPAPKAAGVIHGDFERGFIRAETIAYDDFVGLGGEQKAKDAGKMRSEGKSYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|392307368|ref|ZP_10269902.1| GTP-binding protein YchF [Pseudoalteromonas citrea NCIMB 1889]
Length = 363
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDARLDQLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ I H+SG I+
Sbjct: 61 QRIIPTSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIVHVSGTID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D +VI TEL+L+D+ ++ + KK ++ + +L ++ +L++ + +R
Sbjct: 121 PADDIDVINTELVLADMDAADRAAQRNAKKAKGGDKDAKYQNDVLVKVKAHLDEGLTLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EE +IK +N LTIKP +++ANV E+GF+NN LD+++ A ++ +I +CA +
Sbjct: 181 LELSKEEKDAIKSINFLTIKPTMYIANVTEDGFENNPFLDKVREIAAAEDAVVIPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L DK+ F+++LGL+E LN +IR + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEEDDKREFMEDLGLEEPGLNLVIRGGYELLKLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA TI++ D++ ++GE G K+AGK+R EGK Y+V+DGD+LNFL
Sbjct: 301 APQAAGKIHTDFERGFIRAQTIAFDDYIEFRGESGSKDAGKMRQEGKDYVVKDGDVLNFL 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|77460977|ref|YP_350484.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
fluorescens Pf0-1]
gi|398974419|ref|ZP_10685046.1| GTP-binding protein YchF [Pseudomonas sp. GM25]
gi|77384980|gb|ABA76493.1| putative GTP-binding protein [Pseudomonas fluorescens Pf0-1]
gi|398141621|gb|EJM30537.1| GTP-binding protein YchF [Pseudomonas sp. GM25]
Length = 366
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIPHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMSADEKAIIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|452747679|ref|ZP_21947472.1| GTP-binding protein YchF [Pseudomonas stutzeri NF13]
gi|452008423|gb|EME00663.1| GTP-binding protein YchF [Pseudomonas stutzeri NF13]
Length = 366
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALATIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L + ++EE K +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKNFSDEEKRLAKTFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G+ E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMDEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTVKI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|300024021|ref|YP_003756632.1| GTP-binding protein YchF [Hyphomicrobium denitrificans ATCC 51888]
gi|299525842|gb|ADJ24311.1| GTP-binding protein YchF [Hyphomicrobium denitrificans ATCC 51888]
Length = 365
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 252/363 (69%), Gaps = 2/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL+ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQTAAAEAANYPFCTIEPNVGEVAVPDARLETLAKIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGNKFL+HIRE + V +V+RCF DD ITH+ I
Sbjct: 61 SKEILPTRLTFVDIAGLVRGASKGEGLGNKFLSHIREVDAVAYVLRCFVDDDITHVENRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+V++TEL+L+DL LEK + + KK ++ + ++++ + L + P R
Sbjct: 121 DPLADADVVETELMLADLESLEKRVSQIEKKAKTGDKEAKAQFAVMEKPLLLLREGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICA 238
L ++ EE+ + + L LLT KP+++V NV+E+ + N Q++ A + ++II A
Sbjct: 181 LATMTPEEMPAFRALQLLTSKPVVYVCNVEESAAAHGNAYSKQVEERAKAEGAAVVIISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E E + L D+ FL +GL E LN LIRA +SLLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEFAGLAPEDRDAFLAEMGLDEPGLNRLIRAGYSLLDLVTYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T QAAG+IHTD ++GFIRA TI+Y D++ GE G K+AGK+R EGK+Y+V+DGD+++
Sbjct: 301 TKGPQAAGVIHTDFEKGFIRAETIAYADYVSGNGEAGAKDAGKMRLEGKEYVVQDGDVMH 360
Query: 359 FLF 361
F F
Sbjct: 361 FRF 363
>gi|260767759|ref|ZP_05876694.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio furnissii
CIP 102972]
gi|375130235|ref|YP_004992335.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
gi|260617268|gb|EEX42452.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio furnissii
CIP 102972]
gi|315179409|gb|ADT86323.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
Length = 363
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 262/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L NIV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALANIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL E+ I ++ K+ ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELALADLDSCERAIQRQAKRAKGGDKDAKFELTVLEKLLPVLTEGGSART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EEL ++ +LN LT+KP +++ANV E+GF +N LD ++ +A +N ++ +CA +
Sbjct: 181 VNLSKEELAAVGYLNFLTLKPTMYIANVAEDGFDDNPYLDAVREFAAKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEEDERDEFLADLGIEEPGLNRVIRSGYDLLSLHTYFTAGVKEVRAWTIPIGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A Q+AG IHTD +RGFIRA I Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQSAGKIHTDFERGFIRAEVIGYDDFIQYNGESGAKEAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|384921601|ref|ZP_10021576.1| GTP-dependent nucleic acid-binding protein EngD [Citreicella sp.
357]
gi|384464507|gb|EIE49077.1| GTP-dependent nucleic acid-binding protein EngD [Citreicella sp.
357]
Length = 365
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 251/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M + G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I +
Sbjct: 1 MGFRMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDTLARIAQ 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+DD +TH+ G +
Sbjct: 61 SKSIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDDDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TELI++D+ LEK + +K ++ +++ +L++ + L + P R
Sbjct: 121 DPVSDAETIETELIIADMESLEKRLTNITRKVRGGDKDAVQQERLMRDALAMLEQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++++++ + L LLT KP+++V NV E+ N L + A Q ++I A
Sbjct: 181 AVEVDDDDVRQWRMLQLLTAKPVLYVCNVDESEAATGNALSQAVAAMAAEQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+EEEIS L+ + + FL LGL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIEEEISQLDPEEAEMFLSELGLEEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y DF+ GEQ K AGK+R+EGK Y V+DGD+L+
Sbjct: 301 TQAPQAAGVIHGDFEKGFIRAETIAYDDFIAAGGEQPAKEAGKMRAEGKTYTVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|421617605|ref|ZP_16058592.1| GTP-binding protein YchF [Pseudomonas stutzeri KOS6]
gi|409780385|gb|EKN60016.1| GTP-binding protein YchF [Pseudomonas stutzeri KOS6]
Length = 366
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L + ++EE K +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKNFSDEEKRLAKIFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAKEEGALVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G++E LN +IRA +SLL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q+A IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQSAAAIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|84685124|ref|ZP_01013023.1| GTP-binding protein YchF [Maritimibacter alkaliphilus HTCC2654]
gi|84666856|gb|EAQ13327.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2654]
Length = 365
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 252/364 (69%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M + G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I K
Sbjct: 1 MGFRMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+D +TH+ G +
Sbjct: 61 SKEIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DA+ I+TEL+L+D+ +EK + +K ++ +++ +L+K + L P R
Sbjct: 121 NPVEDAQTIETELMLADMESIEKRLQNIVRKVRGGDKEAVQQERLMKAAMEALEAGQPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ E+ + K L LLT KPI++V NV E+ + N + A Q ++I A
Sbjct: 181 TVEVDAEDAKAWKMLQLLTTKPILYVCNVGEDEAAEGNEHSAAVAEMAAEQGAASVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+EEEIS L+ ++ FLD LGL++ L+ LI+A + LL L+TYFTVG KE RAWTI G
Sbjct: 241 KIEEEISQLDAEEQAMFLDELGLEQAGLDRLIKAGYDLLHLQTYFTVGPKEARAWTIKEG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D +RGFIRA TI+Y D++ GE G K+AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 TAAPQAAGVIHGDFERGFIRAETIAYDDYIALGGENGAKDAGKMRAEGKSYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|443473464|ref|ZP_21063488.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
pseudoalcaligenes KF707]
gi|442904201|gb|ELS29317.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas
pseudoalcaligenes KF707]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + ++ P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKALLEKLIPHFSEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L EE ++ +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LLKNLGEEEKRLVRGFHLLTSKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYDLLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|89073085|ref|ZP_01159624.1| putative GTP-binding protein [Photobacterium sp. SKA34]
gi|89051038|gb|EAR56495.1| putative GTP-binding protein [Photobacterium sp. SKA34]
Length = 363
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 260/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD R+ L V
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G I+
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++I EL ++DL E+ I + K+ + + +K+L+++ L R
Sbjct: 121 PLEDIDIINLELAMADLDTCERAIFRLAKRAKGGDNDAKFEIKVLEKMQPILTDGGMARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
M L+ EEL ++ +L+ LT+KP +++ANV ++GF+NN LD++ A +N ++ +CA +
Sbjct: 181 MELSKEELAAVDYLHFLTLKPTMYIANVNDDGFENNQFLDKVIARAAEENAVVVPVCAAM 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESEIAELDDEDREEFLADMGIEEPGLNRVIRSGYELLSLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I Y D++ GE G K AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APKAAGVIHTDFEKGFIRAEVIGYDDYINCGGESGAKEAGKWRLEGKEYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|386021942|ref|YP_005939967.1| translation-associated GTPase [Pseudomonas stutzeri DSM 4166]
gi|327481915|gb|AEA85225.1| translation-associated GTPase [Pseudomonas stutzeri DSM 4166]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKGLLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L ++EE K +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKHFSDEEKRLTKTFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G+ E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMDEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|399519462|ref|ZP_10760257.1| translation-associated GTPase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112558|emb|CCH36815.1| translation-associated GTPase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ S+ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKESVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L L ++E K +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LLKDLGDDEKRLAKTFHLLTTKPVMYIANVAEDGFENNPHLDVVQAIADAEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G++E LN +IRA +SLL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMEEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q+A IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQSAAAIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398923528|ref|ZP_10660748.1| GTP-binding protein YchF [Pseudomonas sp. GM48]
gi|398175144|gb|EJM62911.1| GTP-binding protein YchF [Pseudomonas sp. GM48]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|169633723|ref|YP_001707459.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter
baumannii SDF]
gi|169152515|emb|CAP01489.1| putative GTP-binding protein [Acinetobacter baumannii]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IV
Sbjct: 4 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP 63
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 64 QRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 123
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K I + K ++ ++ +L++I L++ P R
Sbjct: 124 PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA 183
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E I+ L+T+KP +++ANV E+GF+NN L+ +K A +N ++ +C ++
Sbjct: 184 ADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI 243
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ +G++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 244 EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTLKVGAT 303
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ Y GE G K AGK R EGK Y+V+DGD+++F
Sbjct: 304 APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR 363
Query: 361 FNI 363
FN+
Sbjct: 364 FNV 366
>gi|70732483|ref|YP_262246.1| GTP-binding protein YchF [Pseudomonas protegens Pf-5]
gi|68346782|gb|AAY94388.1| GTP-binding protein YchF [Pseudomonas protegens Pf-5]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E + I+ +LLT KP++++ANV E+GF++N LLD +K A + ++ +C
Sbjct: 181 LMKDMSADEKLIIRGFHLLTTKPVMYIANVAEDGFEDNPLLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398952337|ref|ZP_10674726.1| GTP-binding protein YchF [Pseudomonas sp. GM33]
gi|398155265|gb|EJM43715.1| GTP-binding protein YchF [Pseudomonas sp. GM33]
Length = 366
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKTMSTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKNMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|148245097|ref|YP_001219791.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Vesicomyosocius okutanii HA]
gi|146326924|dbj|BAF62067.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus
Vesicomyosocius okutanii HA]
Length = 363
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALT+ I + NYPFCTI+PNIGI+ + D+RL L I+
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQSNIESVNYPFCTIKPNIGIVPINDERLDKLAKIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KKI PAII+ VDIAGLV GASKG+GLGN+FL +IRET+ +IHVIR F +D I H+SG+++
Sbjct: 61 KKIIPAIIEFVDIAGLVKGASKGDGLGNQFLTNIRETDAIIHVIRAFDNDNIIHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+DL ++EK K K + I L +L +I+ LN IR
Sbjct: 121 PLDDIEIINTELILADLNVVEKLYKKSLKNTKSGQKDGIPLHNILTKILSVLNNGNSIRT 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+S + EEL +K L LLTIKPI++VANV E GF NN L ++ ++ +N I+ ICAK
Sbjct: 181 LSFDKEELKLLKGLQLLTIKPILYVANVSEVGFLNNPYLKIIEKLSNKENTQIVTICAKT 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E+EIS+L+ +K+ FL +G E+ L+ LI+A + LL L+TYFT G +E+RAWTI G
Sbjct: 241 EDEISELDKNEKQEFLSEMGQSESGLDRLIKAGYKLLGLQTYFTAGAQEVRAWTINIGDK 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA IH+D+K+GFIRA TI++ DF+ +KGE+G K AG +RSEGK+Y+V+DGDI++FL
Sbjct: 301 APQAASKIHSDLKKGFIRAQTIAFSDFIEFKGEKGAKEAGNLRSEGKEYIVQDGDIIHFL 360
Query: 361 FNI 363
+NI
Sbjct: 361 YNI 363
>gi|430751991|ref|YP_007214899.1| GTPase [Thermobacillus composti KWC4]
gi|430735956|gb|AGA59901.1| putative GTPase, probable translation factor [Thermobacillus
composti KWC4]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +VK
Sbjct: 1 MGLKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P + VDIAGLV+GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+SG+++
Sbjct: 61 QRKVPTAFEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIVHVVRCFQDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I ELIL+DL +E+ +++ K + I+ +++L+RI L P R
Sbjct: 121 PLSDIATINLELILADLETVERRLERARKNTKSGEKKYIQEVQVLERIREALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L+++E + ++ L+L+T KP+++ ANV E+ N N L+ ++ YA ++ ++ I
Sbjct: 181 VELDDDEKLLVRDLHLITSKPVLYAANVSESEAANADGNPLVQAVRAYAESEGAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L+ DK FL+ LG+KE+ L+ LI+A++ LL L+TYFT G++E+RAWTI
Sbjct: 241 AKVEAEIAELDGEDKALFLEELGIKESGLDRLIKAAYKLLGLQTYFTAGEQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IH+D +RGFIRA +SY+DF+ + G++R EGK Y+V+DGDI+
Sbjct: 301 GTKAPQAAGVIHSDFERGFIRAEVVSYEDFVAAGSMNAVRERGQLRLEGKDYVVQDGDIM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398942271|ref|ZP_10670209.1| GTP-binding protein YchF [Pseudomonas sp. GM41(2012)]
gi|398160823|gb|EJM49078.1| GTP-binding protein YchF [Pseudomonas sp. GM41(2012)]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRII--FNLNKSIPI 178
P D E+I ELI +DL EK + K + ++ ++ LL+++I F L K
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPART 180
Query: 179 RLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++ I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKTMGADDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDIVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|339495317|ref|YP_004715610.1| translation-associated GTPase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338802689|gb|AEJ06521.1| translation-associated GTPase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKALLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L ++EE + +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKHFSDEEKRLARTFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G+ E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMDEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|429335292|ref|ZP_19215929.1| GTP-binding protein YchF [Pseudomonas putida CSV86]
gi|428760094|gb|EKX82371.1| GTP-binding protein YchF [Pseudomonas putida CSV86]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 262/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++E I+ +LLT KP++++ANV E+GF NN LD ++ A + ++ +C
Sbjct: 181 LMKNMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+ ++K FL+ LGL+E LN +IRA ++LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDEGEEKDMFLEALGLEEPGLNRVIRAGYALLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQYKGEGGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|426411483|ref|YP_007031582.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas sp.
UW4]
gi|426269700|gb|AFY21777.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas sp.
UW4]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKTMSTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|429888064|ref|ZP_19369561.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
PS15]
gi|429224902|gb|EKY31212.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
PS15]
Length = 363
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N ++ +CA +
Sbjct: 181 VNLSKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254468366|ref|ZP_05081772.1| GTP-binding protein YchF [beta proteobacterium KB13]
gi|207087176|gb|EDZ64459.1| GTP-binding protein YchF [beta proteobacterium KB13]
Length = 361
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 269/361 (74%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
+KCG++GLPNVGKSTLFNA+TK I A NYPFCTIEPN GI+EVPD RL L IV +K
Sbjct: 1 MKCGIVGLPNVGKSTLFNAITKSGIEAANYPFCTIEPNSGIVEVPDLRLNKLAAIVNPEK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
I PAI++ VDIAGLV+GASKGEGLGNKFLA+IRETN ++HV+RCF D+ I H+ G+I+P+
Sbjct: 61 IMPAIVEFVDIAGLVAGASKGEGLGNKFLANIRETNAILHVVRCFDDENIVHVDGKIDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E I TELIL+D+ + K I+KE KK ++ +++ L L + ++ LN+ ++ M
Sbjct: 121 GDIETINTELILADMESVSKAIEKEKKKSKSGDKEALKKLNLYELVLEKLNQGTLLKDMG 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEE 242
L ++L ++ L L+T+KP+++VANV E+GFKNN L ++ +A I ICAK+E
Sbjct: 181 LEKDDLKLLQPLFLITLKPVMYVANVDESGFKNNEYLQKVMDFAATNGSKCIPICAKIES 240
Query: 243 EISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAE 302
EI+DL + +K+ FL L ++E LN +IR +++LL+L+TYFT G KE+RAWTI NG TA
Sbjct: 241 EIADLTDEEKELFLSELNVEEPGLNLIIRETYALLNLQTYFTAGVKEVRAWTIKNGYTAP 300
Query: 303 QAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFN 362
++AG+IHTD +RGFI+A IS++D++ + GEQ K AGK R EGK Y+V+DGD+++F FN
Sbjct: 301 ESAGVIHTDFQRGFIKAEVISFEDYINFGGEQKSKEAGKQRLEGKDYIVKDGDVIHFKFN 360
Query: 363 I 363
+
Sbjct: 361 V 361
>gi|390950927|ref|YP_006414686.1| GTP-binding protein YchF [Thiocystis violascens DSM 198]
gi|390427496|gb|AFL74561.1| GTP-binding protein YchF [Thiocystis violascens DSM 198]
Length = 363
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 261/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I+AENYPFCTI+PN+G++ +PD RL + I +
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDVIAAITRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H++G I+
Sbjct: 61 QKIIPTTMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDDVVHVAGRID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L+DL +E+ +D+ + ++ + LL++ L+ P+R
Sbjct: 121 PLDDIEVINTELALADLESVERALDRAERMARTGDKKILARKALLEQARDQLDAGKPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ + +EL+ ++ L LLT KP +++ANV E+GF +N LLD++ A ++ ++ +CA +
Sbjct: 181 LGFSEDELLELRDLFLLTAKPTMYIANVAEDGFVDNPLLDKVVALAASEGAEVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI +L ++ FL +LGL E LN ++RA + LL L TYFT G KE+RAWTIP
Sbjct: 241 EAEIVELEESERNEFLTDLGLDEPGLNRVVRAGYRLLGLDTYFTSGPKEVRAWTIPKNAK 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AA +IHTD +RGFIRA I+Y DF+ KGEQG K AGK+RSEGK+Y+V+DGDI++F
Sbjct: 301 APKAAAVIHTDFERGFIRAEVIAYDDFVACKGEQGAKEAGKLRSEGKEYVVKDGDIVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|212640667|ref|YP_002317187.1| GTP-dependent nucleic acid-binding protein EngD [Anoxybacillus
flavithermus WK1]
gi|212562147|gb|ACJ35202.1| Predicted GTPase, probable translation factor [Anoxybacillus
flavithermus WK1]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 251/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK + NYPFCTIEPN+GI+EVPD+RLK L +
Sbjct: 1 MGLTAGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKTLTELFNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+ P + + DIAG+V GASKGEGLGNKFL+HIR+ + + V+RCF D+ ITH++G+++
Sbjct: 61 KRTVPTVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFADENITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELI +DL ++K ID+ K K++ ++ +L R+ P R
Sbjct: 121 PIADIETINLELIFADLETVDKRIDRVGKMAKQKDKEAVFEYDILSRLKETFEAGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S EE+ +K L+LLTIKP+++VANV E N N + Q+K +A N +I++C
Sbjct: 181 LSFTEEEMKVVKQLHLLTIKPMLYVANVGEEDLANPNSNEYVQQVKAFAKEDNAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E E+++L++ +K+ FL LG++++ L+ LIRAS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKVEAEMAELDDEEKELFLQELGIEQSGLDQLIRASYSLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIH+D +RGFIRA T+SY D + + AGK+R EGK Y V+DGDI+
Sbjct: 301 GMKAPQCAGIIHSDFERGFIRAETVSYDDLVAAGSMAAAREAGKVRLEGKDYEVQDGDII 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|295707328|ref|YP_003600403.1| GTP-binding protein EngD [Bacillus megaterium DSM 319]
gi|294804987|gb|ADF42053.1| GTP-binding protein EngD [Bacillus megaterium DSM 319]
Length = 366
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIRE + + HV+RCF+D+ ITH+SG+++
Sbjct: 61 KKTIPTAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICHVVRCFEDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I + K K++ ++ ++L+++ P R
Sbjct: 121 PISDIETINLELILADLETVEKRIGRVQKMAKQKDKEAMYEYEILEKLKNAFESDQPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S E++ +K +LLTIKPI++VANV E+ + N + +++ YA ++ +I++C
Sbjct: 181 VSFTEEQMKLVKQFHLLTIKPILYVANVSEDEVADASANEYVAKVRQYAASEGAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A++E EI++L +K FL+ LG++++ L+ L+RA++ LL L TYFT G++E+RAWT
Sbjct: 241 ARIESEIAELEGEEKAMFLEELGIEQSGLDQLVRAAYDLLGLATYFTAGEQEVRAWTFTQ 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T+SY+D L K + AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVSYEDLLAAKTMGAAREAGKVRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|262170836|ref|ZP_06038514.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus
MB-451]
gi|424807407|ref|ZP_18232815.1| GTP-binding protein [Vibrio mimicus SX-4]
gi|261891912|gb|EEY37898.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus
MB-451]
gi|342325349|gb|EGU21129.1| GTP-binding protein [Vibrio mimicus SX-4]
Length = 363
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEVINLELALADLDSCERAILRQSKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 181 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVQFAAQENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|126735039|ref|ZP_01750785.1| hypothetical protein RCCS2_14219 [Roseobacter sp. CCS2]
gi|126715594|gb|EBA12459.1| hypothetical protein RCCS2_14219 [Roseobacter sp. CCS2]
Length = 365
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/364 (50%), Positives = 254/364 (69%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAS 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+DD ITH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFEDDDITHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAEVI+TEL+L+DL +EK + +K ++ +++ +KLL+ L P R
Sbjct: 121 DPVEDAEVIETELMLADLESIEKRLQNLVRKVRGGDKEAVQQVKLLELAQAALENGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGF-KNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++++ + K L LLT KP+++V NV+E+ N ++ A Q ++I A
Sbjct: 181 TVEVDDDDAKAWKMLQLLTTKPVLYVCNVEEDSAGSGNSQSARVAEMAAAQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL+ +GL+E L+ LIRA + LL L+TYFTVG KE RAWTI G
Sbjct: 241 RIEEEISQLEAEEAEMFLEEMGLEEAGLDRLIRAGYELLHLQTYFTVGPKEARAWTIKEG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T+A QAAG+IH D +RGFIRA TI+Y DF+ GEQ K AGK+R+EGK Y+V+DGD+++
Sbjct: 301 TSAPQAAGVIHGDFERGFIRAETIAYDDFVTLGGEQPAKEAGKMRAEGKAYIVKDGDVMH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|262404530|ref|ZP_06081085.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp.
RC586]
gi|262349562|gb|EEY98700.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp.
RC586]
Length = 363
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD R+ L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL LSDL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEVINLELALSDLDSCERAILRQSKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 181 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVEFAAQENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYDDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|335429978|ref|ZP_08556873.1| GTP-binding protein YchF [Haloplasma contractile SSD-17B]
gi|334888394|gb|EGM26691.1| GTP-binding protein YchF [Haloplasma contractile SSD-17B]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 253/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + A NYPF TI+PN+G++EVPD+RL L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGVEAANYPFATIDPNVGVVEVPDERLDKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAGLV GASKGEGLGN+FL+HIR+ + + V+RCF DD ITH+ GE+
Sbjct: 61 KKTIPTTFEFTDIAGLVRGASKGEGLGNQFLSHIRQVDAICQVVRCFVDDNITHVDGEVE 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ ++K + + K+ +K++ I ++L +I +P R
Sbjct: 121 PIRDIETINFELILADMDQIDKRLKRIEKQVKMKDKQYIAEFEVLAKIKVGFENEVPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
L+ +EL +K + LLT+KP+++VANV E+ N + ++K +A + +I +C
Sbjct: 181 QELSKDELEIVKHMQLLTLKPMLYVANVSEDEVATPDENPNVIRVKEFASQEGAEVITVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI +L+ K+ FL++LG+ E+ L+ LIRA++ LL L TYFT G+KE+RAWT
Sbjct: 241 AKIESEIVELDEESKEMFLEDLGITESGLDKLIRAAYDLLGLETYFTAGEKEVRAWTFIK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q AGIIHTD ++GFIRA T++YKD + Y EQ K AGK+R EGK Y+V+DGD++
Sbjct: 301 GMTAPQCAGIIHTDFQKGFIRAETVAYKDLVQYGSEQAAKEAGKVRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398869871|ref|ZP_10625228.1| GTP-binding protein YchF [Pseudomonas sp. GM74]
gi|398210283|gb|EJM96935.1| GTP-binding protein YchF [Pseudomonas sp. GM74]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMKNMGADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|333899117|ref|YP_004472990.1| GTP-binding protein YchF [Pseudomonas fulva 12-X]
gi|333114382|gb|AEF20896.1| GTP-binding protein YchF [Pseudomonas fulva 12-X]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN G++ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGVVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKALLEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L +L ++E K +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LLKNLGDDEKRLAKTFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G+ E LN +IRA +SLL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMTEPGLNRVIRAGYSLLNLQTYFTAGVKEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q+A IHTD ++GFIRA I+Y DF+ Y+GE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQSAAAIHTDFEKGFIRAEVIAYDDFIQYRGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|345301915|ref|YP_004823817.1| GTP-binding protein YchF [Rhodothermus marinus SG0.5JP17-172]
gi|345111148|gb|AEN71980.1| GTP-binding protein YchF [Rhodothermus marinus SG0.5JP17-172]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/366 (46%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNAL++ + NYPFCTIEPN+G++ VPD+RL+ L + +
Sbjct: 1 MPLRCGIVGLPNVGKSTLFNALSRAGAESANYPFCTIEPNVGVVPVPDERLERLAELAGS 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P I+ VDIAGLV+GASKGEGLGN+FLAHIRE + ++HV+RCF+D I H+SG ++
Sbjct: 61 ARVTPTTIEFVDIAGLVAGASKGEGLGNQFLAHIREVDAILHVVRCFEDPNIVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+IQTEL+L DL +E+ I++ + ++ E L +R+ +L+ P RL
Sbjct: 121 PARDIEIIQTELLLKDLETVERRIERTARAAKSGDKKLREELAFYERLRDHLSSGAPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
++++ E ++ L LLT+KP+++VANV E+ + N + ++ A + +++IC
Sbjct: 181 FTVSDLEAPWLRSLFLLTVKPVLYVANVAESDLPEGEGNPHVATVREIAAKEGAQVVVIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A+LE ++++L+ +++ FL LGL+ L L+RA++ LL L T+FTVG KE RAWTI
Sbjct: 241 AELEAQLAELDEEERRAFLKELGLERPGLERLVRAAYELLGLITFFTVGPKEARAWTIRR 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A+QAAG+IH+D +RGFIRA TISY+D++ Y E + AG +RSEG+ Y+V+DGD++
Sbjct: 301 GTRAQQAAGLIHSDFERGFIRAETISYEDYIRYGSEAAAREAGAMRSEGRDYVVQDGDVI 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 LFRFNV 366
>gi|384044191|ref|YP_005492208.1| GTPase [Bacillus megaterium WSH-002]
gi|345441882|gb|AEN86899.1| GTPase probable translation factor-like protein [Bacillus
megaterium WSH-002]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIRE + + HV+RCF+D+ ITH+SG+++
Sbjct: 61 KKTIPTAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICHVVRCFEDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I + K K++ ++ ++L+++ P R
Sbjct: 121 PISDIETINLELILADLETVEKRIGRVQKMAKQKDKEAMYEYEVLEKLKNAFESDQPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S E++ +K +LLTIKPI++VANV E+ + N + +++ YA ++ +I++C
Sbjct: 181 VSFTEEQMKLVKQFHLLTIKPILYVANVSEDEVADASANEYVAKVREYAASEGAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A++E EI++L +K FL+ LG++++ L+ L+RA++ LL L TYFT G++E+RAWT
Sbjct: 241 ARIESEIAELEGEEKAMFLEELGIEQSGLDQLVRAAYDLLGLATYFTAGEQEVRAWTFTQ 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T+SY+D L K + AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVSYEDLLAAKTMGAAREAGKVRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398914045|ref|ZP_10656769.1| GTP-binding protein YchF [Pseudomonas sp. GM49]
gi|398179254|gb|EJM66870.1| GTP-binding protein YchF [Pseudomonas sp. GM49]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E IK +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKNMGTDEKAVIKGFHLLTTKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|294501977|ref|YP_003565677.1| GTP-binding protein EngD [Bacillus megaterium QM B1551]
gi|294351914|gb|ADE72243.1| GTP-binding protein EngD [Bacillus megaterium QM B1551]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIRE + + HV+RCF+D+ ITH+SG+++
Sbjct: 61 KKTIPTAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICHVVRCFEDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I + K K++ ++ ++L+++ P R
Sbjct: 121 PISDIETINLELILADLETVEKRIGRVQKMAKQKDKEAMYEYEILEKLKNAFESDQPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S E++ +K +LLTIKPI++VANV E+ + N + +++ YA ++ +I++C
Sbjct: 181 VSFTEEQMKLVKQFHLLTIKPILYVANVSEDEVADASANEYVAKVREYAASEGAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A++E EI++L +K FL+ LG++++ L+ L+RA++ LL L TYFT G++E+RAWT
Sbjct: 241 ARIESEIAELEGEEKAMFLEELGIEQSGLDQLVRAAYDLLGLATYFTAGEQEVRAWTFTQ 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T+SY+D L K + AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVSYEDLLAAKTMGAAREAGKVRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|409427028|ref|ZP_11261559.1| GTP-binding protein YchF [Pseudomonas sp. HYS]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKAMGADEKALIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGALVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA +SLL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYSLLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA + Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVGYDDFIQYKGEGGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|297582078|ref|ZP_06943997.1| GTP-binding protein [Vibrio cholerae RC385]
gi|297533773|gb|EFH72615.1| GTP-binding protein [Vibrio cholerae RC385]
Length = 383
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 269/363 (74%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 141 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L+ EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N ++ +CA +
Sbjct: 201 VNLSKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENASVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|395794817|ref|ZP_10474133.1| GTP-binding protein YchF [Pseudomonas sp. Ag1]
gi|395340978|gb|EJF72803.1| GTP-binding protein YchF [Pseudomonas sp. Ag1]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDTRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKALLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ S++ +E IK +LLT KP++++ANV E+GF+NN LLD + A + ++ +C
Sbjct: 181 LMKSMSADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVLAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|433679032|ref|ZP_20510816.1| Obg-like ATPase 1 [Xanthomonas translucens pv. translucens DSM
18974]
gi|430815856|emb|CCP41361.1| Obg-like ATPase 1 [Xanthomonas translucens pv. translucens DSM
18974]
Length = 363
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLGELARIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF++ + H++ +++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFENADVIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I TEL L+DL +EK +++ + ++ + L ++ L R
Sbjct: 121 PISDIDTIDTELALADLDSVEKALNRAERSAKGGDKDAAARKPALAKLQAALADGKAGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN LD ++ A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPHLDAVRARAATEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA+++LL L+TYFT G KE+RAWT+ G+T
Sbjct: 241 EEELSQLDDADRDTFLADLGLAEPGLNRVIRAAYALLGLQTYFTAGVKEVRAWTVKAGST 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G + AG++R EGK Y V++GD+L+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYADFIKYKGEAGAREAGRLRLEGKDYRVQEGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407363830|ref|ZP_11110362.1| GTP-binding protein YchF [Pseudomonas mandelii JR-1]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRII--FNLNKSIPI 178
P D E+I ELI +DL EK + K + ++ ++ LL+++I F L K
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPART 180
Query: 179 RLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++ I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDIVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|449146784|ref|ZP_21777546.1| GTP-binding protein [Vibrio mimicus CAIM 602]
gi|449077637|gb|EMB48609.1| GTP-binding protein [Vibrio mimicus CAIM 602]
Length = 363
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEVINLELALADLDSCERAILRQSKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 181 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVKFAAQENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|147674921|ref|YP_001217701.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae
O395]
gi|161581994|ref|NP_231816.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|360036062|ref|YP_004937825.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741996|ref|YP_005333965.1| GTP-binding protein YchF [Vibrio cholerae IEC224]
gi|384425154|ref|YP_005634512.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
LMA3984-4]
gi|417814214|ref|ZP_12460867.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-49A2]
gi|417817951|ref|ZP_12464580.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HCUF01]
gi|417821518|ref|ZP_12468132.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE39]
gi|417825422|ref|ZP_12472010.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE48]
gi|418335193|ref|ZP_12944106.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-06A1]
gi|418338805|ref|ZP_12947699.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-23A1]
gi|418346727|ref|ZP_12951487.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-28A1]
gi|418350489|ref|ZP_12955220.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-43A1]
gi|418355502|ref|ZP_12958221.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-61A1]
gi|419827145|ref|ZP_14350644.1| GTPase family protein [Vibrio cholerae CP1033(6)]
gi|419830637|ref|ZP_14354122.1| GTPase family protein [Vibrio cholerae HC-1A2]
gi|419834319|ref|ZP_14357774.1| GTPase family protein [Vibrio cholerae HC-61A2]
gi|419837898|ref|ZP_14361336.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-46B1]
gi|421318319|ref|ZP_15768887.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1032(5)]
gi|421321941|ref|ZP_15772494.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1038(11)]
gi|421325744|ref|ZP_15776268.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1041(14)]
gi|421329403|ref|ZP_15779913.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1042(15)]
gi|421333309|ref|ZP_15783786.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1046(19)]
gi|421336900|ref|ZP_15787361.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1048(21)]
gi|421340327|ref|ZP_15790759.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-20A2]
gi|421344538|ref|ZP_15794941.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-43B1]
gi|421348482|ref|ZP_15798859.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-46A1]
gi|421354842|ref|ZP_15805174.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-45]
gi|422308126|ref|ZP_16395279.1| GTPase family protein [Vibrio cholerae CP1035(8)]
gi|422897283|ref|ZP_16934729.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-40A1]
gi|422903477|ref|ZP_16938451.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-48A1]
gi|422907361|ref|ZP_16942164.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-70A1]
gi|422911026|ref|ZP_16945654.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-09]
gi|422914210|ref|ZP_16948716.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HFU-02]
gi|422918026|ref|ZP_16952344.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-02A1]
gi|422923487|ref|ZP_16956638.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
BJG-01]
gi|422926414|ref|ZP_16959428.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-38A1]
gi|423145737|ref|ZP_17133331.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-19A1]
gi|423150413|ref|ZP_17137727.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-21A1]
gi|423154231|ref|ZP_17141412.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-22A1]
gi|423157315|ref|ZP_17144408.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-32A1]
gi|423160885|ref|ZP_17147825.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-33A2]
gi|423165711|ref|ZP_17152436.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-48B2]
gi|423735853|ref|ZP_17709047.1| GTPase family protein [Vibrio cholerae HC-41B1]
gi|423769013|ref|ZP_17713155.1| GTPase family protein [Vibrio cholerae HC-50A2]
gi|423822928|ref|ZP_17716938.1| GTPase family protein [Vibrio cholerae HC-55C2]
gi|423856892|ref|ZP_17720744.1| GTPase family protein [Vibrio cholerae HC-59A1]
gi|423883195|ref|ZP_17724332.1| GTPase family protein [Vibrio cholerae HC-60A1]
gi|423895613|ref|ZP_17727360.1| GTPase family protein [Vibrio cholerae HC-62A1]
gi|423931049|ref|ZP_17731752.1| GTPase family protein [Vibrio cholerae HC-77A1]
gi|423956684|ref|ZP_17735238.1| GTPase family protein [Vibrio cholerae HE-40]
gi|423985472|ref|ZP_17738789.1| GTPase family protein [Vibrio cholerae HE-46]
gi|423998452|ref|ZP_17741704.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-02C1]
gi|424003165|ref|ZP_17746240.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-17A2]
gi|424006953|ref|ZP_17749923.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-37A1]
gi|424010191|ref|ZP_17753125.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-44C1]
gi|424017346|ref|ZP_17757175.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-55B2]
gi|424020270|ref|ZP_17760056.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-59B1]
gi|424024935|ref|ZP_17764586.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-62B1]
gi|424027822|ref|ZP_17767425.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-69A1]
gi|424587100|ref|ZP_18026679.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1030(3)]
gi|424591892|ref|ZP_18031317.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1037(10)]
gi|424595750|ref|ZP_18035070.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1040(13)]
gi|424599665|ref|ZP_18038844.1| GTP-dependent nucleic acid-binding protein engD [Vibrio Cholerae
CP1044(17)]
gi|424602383|ref|ZP_18041524.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1047(20)]
gi|424607358|ref|ZP_18046300.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1050(23)]
gi|424611179|ref|ZP_18050018.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-39A1]
gi|424613990|ref|ZP_18052778.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-41A1]
gi|424617966|ref|ZP_18056638.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-42A1]
gi|424622750|ref|ZP_18061255.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-47A1]
gi|424625647|ref|ZP_18064108.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-50A1]
gi|424630130|ref|ZP_18068417.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-51A1]
gi|424634178|ref|ZP_18072278.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-52A1]
gi|424637255|ref|ZP_18075263.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-55A1]
gi|424641164|ref|ZP_18079047.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-56A1]
gi|424645714|ref|ZP_18083450.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-56A2]
gi|424649232|ref|ZP_18086895.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-57A1]
gi|424653481|ref|ZP_18090861.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-57A2]
gi|424657303|ref|ZP_18094588.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-81A2]
gi|424660688|ref|ZP_18097935.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-16]
gi|440710375|ref|ZP_20891025.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
4260B]
gi|443504532|ref|ZP_21071490.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-64A1]
gi|443508433|ref|ZP_21075195.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-65A1]
gi|443512277|ref|ZP_21078914.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-67A1]
gi|443515830|ref|ZP_21082341.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-68A1]
gi|443519623|ref|ZP_21086019.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-71A1]
gi|443524514|ref|ZP_21090727.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-72A2]
gi|443528146|ref|ZP_21094194.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-78A1]
gi|443532110|ref|ZP_21098124.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-7A1]
gi|443535916|ref|ZP_21101789.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-80A1]
gi|443539452|ref|ZP_21105306.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-81A1]
gi|449055402|ref|ZP_21734070.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
O1 str. Inaba G4222]
gi|146316804|gb|ABQ21343.1| GTP-binding protein [Vibrio cholerae O395]
gi|327484707|gb|AEA79114.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
LMA3984-4]
gi|340036700|gb|EGQ97676.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-49A2]
gi|340037674|gb|EGQ98649.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HCUF01]
gi|340039149|gb|EGR00124.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE39]
gi|340046907|gb|EGR07837.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE48]
gi|341620921|gb|EGS46675.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-48A1]
gi|341621121|gb|EGS46873.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-70A1]
gi|341621673|gb|EGS47412.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-40A1]
gi|341632668|gb|EGS57528.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-09]
gi|341636908|gb|EGS61602.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-02A1]
gi|341637113|gb|EGS61805.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HFU-02]
gi|341644027|gb|EGS68277.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
BJG-01]
gi|341646196|gb|EGS70314.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-38A1]
gi|356417217|gb|EHH70836.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-06A1]
gi|356418120|gb|EHH71727.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-21A1]
gi|356422575|gb|EHH76049.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-19A1]
gi|356428214|gb|EHH81443.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-22A1]
gi|356430447|gb|EHH83656.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-23A1]
gi|356433032|gb|EHH86227.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-28A1]
gi|356439589|gb|EHH92558.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-32A1]
gi|356444985|gb|EHH97794.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-43A1]
gi|356445402|gb|EHH98209.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-33A2]
gi|356450523|gb|EHI03243.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-48B2]
gi|356452000|gb|EHI04679.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-61A1]
gi|356647216|gb|AET27271.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795506|gb|AFC58977.1| GTP-binding protein YchF [Vibrio cholerae IEC224]
gi|395916577|gb|EJH27407.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1032(5)]
gi|395917582|gb|EJH28410.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1041(14)]
gi|395918935|gb|EJH29759.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1038(11)]
gi|395927937|gb|EJH38700.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1042(15)]
gi|395928711|gb|EJH39464.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1046(19)]
gi|395931999|gb|EJH42743.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1048(21)]
gi|395939610|gb|EJH50292.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-20A2]
gi|395940618|gb|EJH51299.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-43B1]
gi|395943061|gb|EJH53737.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-46A1]
gi|395953967|gb|EJH64580.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-45]
gi|395958565|gb|EJH69049.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-56A2]
gi|395958966|gb|EJH69418.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-57A2]
gi|395961706|gb|EJH72020.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-42A1]
gi|395970528|gb|EJH80283.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-47A1]
gi|395972669|gb|EJH82254.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1030(3)]
gi|395975529|gb|EJH85020.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1047(20)]
gi|408006760|gb|EKG44886.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-39A1]
gi|408011757|gb|EKG49561.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-50A1]
gi|408012256|gb|EKG50044.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-41A1]
gi|408017726|gb|EKG55210.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-52A1]
gi|408022953|gb|EKG60137.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-56A1]
gi|408023386|gb|EKG60558.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-55A1]
gi|408030252|gb|EKG66921.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1037(10)]
gi|408031481|gb|EKG68102.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1040(13)]
gi|408032181|gb|EKG68773.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-57A1]
gi|408041277|gb|EKG77394.1| GTP-dependent nucleic acid-binding protein engD [Vibrio Cholerae
CP1044(17)]
gi|408042564|gb|EKG78611.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
CP1050(23)]
gi|408050256|gb|EKG85426.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HE-16]
gi|408052648|gb|EKG87678.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-81A2]
gi|408054584|gb|EKG89552.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-51A1]
gi|408607935|gb|EKK81338.1| GTPase family protein [Vibrio cholerae CP1033(6)]
gi|408618615|gb|EKK91688.1| GTPase family protein [Vibrio cholerae CP1035(8)]
gi|408620410|gb|EKK93422.1| GTPase family protein [Vibrio cholerae HC-1A2]
gi|408629477|gb|EKL02169.1| GTPase family protein [Vibrio cholerae HC-41B1]
gi|408633473|gb|EKL05817.1| GTPase family protein [Vibrio cholerae HC-50A2]
gi|408634904|gb|EKL07139.1| GTPase family protein [Vibrio cholerae HC-55C2]
gi|408640497|gb|EKL12289.1| GTPase family protein [Vibrio cholerae HC-59A1]
gi|408641319|gb|EKL13100.1| GTPase family protein [Vibrio cholerae HC-60A1]
gi|408649141|gb|EKL20458.1| GTPase family protein [Vibrio cholerae HC-61A2]
gi|408654481|gb|EKL25623.1| GTPase family protein [Vibrio cholerae HC-77A1]
gi|408655413|gb|EKL26538.1| GTPase family protein [Vibrio cholerae HC-62A1]
gi|408657229|gb|EKL28316.1| GTPase family protein [Vibrio cholerae HE-40]
gi|408663814|gb|EKL34664.1| GTPase family protein [Vibrio cholerae HE-46]
gi|408845561|gb|EKL85677.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-37A1]
gi|408845699|gb|EKL85814.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-17A2]
gi|408852807|gb|EKL92629.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-02C1]
gi|408856446|gb|EKL96141.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-46B1]
gi|408859966|gb|EKL99620.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-55B2]
gi|408863443|gb|EKM02926.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-44C1]
gi|408867364|gb|EKM06726.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-59B1]
gi|408870229|gb|EKM09509.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-62B1]
gi|408879125|gb|EKM18118.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-69A1]
gi|439974065|gb|ELP50261.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
4260B]
gi|443431477|gb|ELS74029.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-64A1]
gi|443435053|gb|ELS81198.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-65A1]
gi|443438879|gb|ELS88595.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-67A1]
gi|443443240|gb|ELS96542.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-68A1]
gi|443447041|gb|ELT03697.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-71A1]
gi|443449848|gb|ELT10139.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-72A2]
gi|443453662|gb|ELT17481.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-78A1]
gi|443457500|gb|ELT24897.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-7A1]
gi|443460984|gb|ELT32062.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-80A1]
gi|443465552|gb|ELT40212.1| GTP-dependent nucleic acid-binding protein engD [Vibrio cholerae
HC-81A1]
gi|448264441|gb|EMB01678.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
O1 str. Inaba G4222]
Length = 363
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N ++ +CA +
Sbjct: 181 VNLTKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|403382952|ref|ZP_10925009.1| GTP-binding protein YchF [Paenibacillus sp. JC66]
Length = 366
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 258/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL+ L +IV
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLQKLADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+SG+++
Sbjct: 61 NRIVPTAFEFVDIAGLVKGASKGEGLGNKFLAHIREVDAIVHVVRCFQDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I++ K ++ ++ L+RI L + P+R
Sbjct: 121 PISDIETINLELILADLDSVEKRIERSRKNMKGGDKKVAAEVECLERIKTALLEEKPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L++E+ + I+ L+LLTIKPI++ ANV E N N ++Q++ YA + ++ I
Sbjct: 181 VELSDEDRLLIRDLHLLTIKPILYAANVSEEEAGNADGNEYVEQVRNYAAKEGAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L D++ FL LGL+E+ L+ LIRA++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVESEIAELEGEDREMFLAELGLQESGLDRLIRAAYKLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAA +IHTD +RGFIRA +SY+D K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPQAAAVIHTDFERGFIRAEVVSYEDLTAAGSMNAAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398842526|ref|ZP_10599705.1| GTP-binding protein YchF [Pseudomonas sp. GM102]
gi|398860959|ref|ZP_10616600.1| GTP-binding protein YchF [Pseudomonas sp. GM79]
gi|398105623|gb|EJL95710.1| GTP-binding protein YchF [Pseudomonas sp. GM102]
gi|398233978|gb|EJN19874.1| GTP-binding protein YchF [Pseudomonas sp. GM79]
Length = 366
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRII--FNLNKSIPI 178
P D E+I ELI +DL EK + K + ++ ++ LL+++I F L K
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIAHFTLGKPART 180
Query: 179 RLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++ I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDIVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|190892774|ref|YP_001979316.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium etli
CIAT 652]
gi|190698053|gb|ACE92138.1| putative GTP-binding protein [Rhizobium etli CIAT 652]
Length = 367
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKESMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L +L+ E + +K LNLLT P+++V NV E N + + A Q ++I
Sbjct: 181 TLLSTLDAEGIAILKGLNLLTSHPVLYVCNVAEAEASTGNEFTEAVAAMAREQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEDEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ + GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKFNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|399911608|ref|ZP_10779922.1| GTP-binding protein YchF [Halomonas sp. KM-1]
Length = 363
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 254/363 (69%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVGP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +E+ I + + ++ +I +L+R+ +L + P+R
Sbjct: 121 PRSDIETINLELALADLDTVERAIQRLVRVAKGGDKDAIATKAILERVQPHLAEGQPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE +K LT+KP +++ANV E+GF+NN LD + A + ++ +C +L
Sbjct: 181 FGLDEEEKRQVKSFGFLTLKPTMYIANVNEDGFENNPYLDIVNEIAAEEGAVVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L++ ++ FL +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDDDERAMFLGEMGMEEPGLDRVIRAGYQLLGLQTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I Y DF+ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVIGYDDFVTLGGEQGAKDAGKWRLEGKEYVVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|258621059|ref|ZP_05716093.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus
VM573]
gi|258586447|gb|EEW11162.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus
VM573]
Length = 383
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 141 PLEDIEVINLELALADLDSCERAILRQSKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 201 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVQFAAQENASVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|307253789|ref|ZP_07535643.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258245|ref|ZP_07539988.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306863273|gb|EFM95213.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867705|gb|EFM99550.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 356
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/356 (50%), Positives = 261/356 (73%)
Query: 8 IGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKKIFPAI 67
+GLPNVGKSTLFNALTK I A NYPFCTIEPN G++ +PD RL L IVK +++ P
Sbjct: 1 MGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLPTT 60
Query: 68 IKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPIHDAEV 127
++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF++D I H++G+I+P D E+
Sbjct: 61 MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPADDIEI 120
Query: 128 IQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMSLNNEE 187
I TEL L+DL E+ I + K+ ++ + L ++++I+ L + IR + L+ +E
Sbjct: 121 INTELALADLDSCERAIQRLQKRAKGGDKDAKFELSIMEKILPVLENAGMIRSVDLDKDE 180
Query: 188 LMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEEEISDL 247
L +IK N LT+KP +++ANV E+GF+NN LD+++ A + ++ +CA +E EI++L
Sbjct: 181 LHAIKGYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAEKEGAVVVPVCAAIESEIAEL 240
Query: 248 NNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAEQAAGI 307
++ +K FL +LG++E LN +IRA + LL+L+TYFT G KE+RAWT+ G TA +AA +
Sbjct: 241 DDEEKVEFLQDLGIEEPGLNRVIRAGYRLLNLQTYFTAGVKEVRAWTVSVGATAPKAAAV 300
Query: 308 IHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFNI 363
IHTD ++GFIRA I+Y +F+ +KGE G K+AGK R EGK Y+V+DGD+++F FN+
Sbjct: 301 IHTDFEKGFIRAEVIAYDNFIQFKGENGAKDAGKWRLEGKDYIVQDGDVMHFRFNV 356
>gi|262166272|ref|ZP_06034009.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus
VM223]
gi|262025988|gb|EEY44656.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus
VM223]
Length = 363
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 266/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK + A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGVEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEVINLELALADLDSCERAILRQSKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 181 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVQFAAQENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|227082310|ref|YP_002810861.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae
M66-2]
gi|227118631|ref|YP_002820527.1| GTP-binding protein [Vibrio cholerae O395]
gi|229507737|ref|ZP_04397242.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
BX 330286]
gi|229512027|ref|ZP_04401506.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
B33]
gi|229513831|ref|ZP_04403293.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
TMA 21]
gi|229519163|ref|ZP_04408606.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
RC9]
gi|229522136|ref|ZP_04411553.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
TM 11079-80]
gi|229528808|ref|ZP_04418198.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
12129(1)]
gi|229607282|ref|YP_002877930.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae
MJ-1236]
gi|254849264|ref|ZP_05238614.1| GTP-binding protein [Vibrio cholerae MO10]
gi|298497800|ref|ZP_07007607.1| GTP-binding protein YchF [Vibrio cholerae MAK 757]
gi|9656740|gb|AAF95330.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|227010198|gb|ACP06410.1| GTP-binding protein [Vibrio cholerae M66-2]
gi|227014081|gb|ACP10291.1| GTP-binding protein [Vibrio cholerae O395]
gi|229332582|gb|EEN98068.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
12129(1)]
gi|229341061|gb|EEO06066.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
TM 11079-80]
gi|229343852|gb|EEO08827.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
RC9]
gi|229349012|gb|EEO13969.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
TMA 21]
gi|229351992|gb|EEO16933.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
B33]
gi|229355242|gb|EEO20163.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
BX 330286]
gi|229369937|gb|ACQ60360.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
MJ-1236]
gi|254844969|gb|EET23383.1| GTP-binding protein [Vibrio cholerae MO10]
gi|297542133|gb|EFH78183.1| GTP-binding protein YchF [Vibrio cholerae MAK 757]
Length = 383
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 141 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N ++ +CA +
Sbjct: 201 VNLTKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENASVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|254447839|ref|ZP_05061304.1| GTP-binding protein YchF [gamma proteobacterium HTCC5015]
gi|198262619|gb|EDY86899.1| GTP-binding protein YchF [gamma proteobacterium HTCC5015]
Length = 364
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/364 (49%), Positives = 257/364 (70%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK +I AENYPFCTI+PN+GI+ VPD R+ L +IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAEIPAENYPFCTIDPNVGIVPVPDARMDALADIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV GASKGEGLGNKFLA+IRET+ + HV+RCF++D ITH+SG I+
Sbjct: 61 EKIIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFENDDITHVSGGIS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TEL+LSDL + K + N+ I KLL++++ +L P R
Sbjct: 121 PLDDMEIINTELLLSDLEAADTAFQKTQRNAKSGNKDIIAKAKLLEKLVAHLEAGEPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIII-ICAK 239
+ + ++ + +K +T KP+++VANV ++GF NN LD ++ A + ++ +CA
Sbjct: 181 VGFDADQWVQLKDHAFITAKPMLYVANVNDDGFDNNPHLDAVRKQAEKEGAECVVPVCAA 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI+ L++ +K FL ++GL+E LN +IRA + LL L+T+FT G KE+RAWT+ G
Sbjct: 241 MEAEIALLDDEEKVEFLADMGLEEPGLNRVIRAGYDLLGLQTFFTAGVKEVRAWTVKKGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA AG IHTD ++GFIRA ++Y+D++ GEQG K+ GK R EGK Y++++ D+++F
Sbjct: 301 TAPNGAGRIHTDFEKGFIRAEVVAYQDYIDAGGEQGAKDNGKWRLEGKDYILQEADVVHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|431926265|ref|YP_007239299.1| GTP-binding protein YchF [Pseudomonas stutzeri RCH2]
gi|431824552|gb|AGA85669.1| GTP-binding protein YchF [Pseudomonas stutzeri RCH2]
Length = 366
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDALAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI++DL EK + + + ++ ++ LL+++I +L + P R
Sbjct: 121 PKRDIEIIDLELIMADLDSCEKQLQRVARTAKGGDKEAVAQKGLLEKLIPHLTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L + ++EE K +LLT KP++++ANV E+GF+NN LD + A + ++ +C
Sbjct: 181 LLKNFSDEEKRLTKTFHLLTTKPVMYIANVAEDGFENNPHLDVVNAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDK-KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+++++ + FL+ +G+ E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDLEEMQMFLETMGMDEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVRI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|395500690|ref|ZP_10432269.1| GTP-binding protein YchF [Pseudomonas sp. PAMC 25886]
Length = 366
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDTRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKALLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LLD + A + ++ +C
Sbjct: 181 LMKNMSTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVMAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398904462|ref|ZP_10652305.1| GTP-binding protein YchF [Pseudomonas sp. GM50]
gi|398175841|gb|EJM63581.1| GTP-binding protein YchF [Pseudomonas sp. GM50]
Length = 366
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRII--FNLNKSIPI 178
P D E+I ELI +DL EK + K + ++ ++ LL+++I F L K
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPART 180
Query: 179 RLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++ I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDIVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|389685809|ref|ZP_10177132.1| GTP-binding protein YchF [Pseudomonas chlororaphis O6]
gi|388550151|gb|EIM13421.1| GTP-binding protein YchF [Pseudomonas chlororaphis O6]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMSADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|330811727|ref|YP_004356189.1| GTP-dependent nucleic acid-binding protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423699282|ref|ZP_17673772.1| GTP-binding protein YchF [Pseudomonas fluorescens Q8r1-96]
gi|327379835|gb|AEA71185.1| Putative GTP-dependent nucleic acid-binding protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|387996007|gb|EIK57337.1| GTP-binding protein YchF [Pseudomonas fluorescens Q8r1-96]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVIP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTLGKPARS 180
Query: 181 M--SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E ++ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LIKNMGADEKQIVRGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|402702459|ref|ZP_10850438.1| GTP-binding protein YchF [Pseudomonas fragi A22]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 263/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL+ L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTLGKPARS 180
Query: 181 M--SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LLD + A + ++ +C
Sbjct: 181 LIKNMDADEKQIIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVLAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + +L+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVQEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ + GE G K AGK R EGK+Y+V+DGD+L
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIKFNGEAGAKEAGKWRLEGKEYIVKDGDVL 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|170723625|ref|YP_001751313.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
W619]
gi|398848312|ref|ZP_10605133.1| GTP-binding protein YchF [Pseudomonas sp. GM84]
gi|169761628|gb|ACA74944.1| GTP-binding protein YchF [Pseudomonas putida W619]
gi|398248752|gb|EJN34153.1| GTP-binding protein YchF [Pseudomonas sp. GM84]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKEALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++E I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKNMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEGGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|425746704|ref|ZP_18864728.1| GTP-binding protein YchF [Acinetobacter baumannii WC-323]
gi|425485343|gb|EKU51737.1| GTP-binding protein YchF [Acinetobacter baumannii WC-323]
Length = 363
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 259/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ VPD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+D+ + H++G+I+
Sbjct: 61 QRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D I TEL L+DL + K + + K ++ ++ +L++I L++ P R
Sbjct: 121 PLDDIATINTELALADLDTVAKALLRLTKAAKGGDKEALATKAVLEKIQPLLDEGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+++E +++ L+T+KP +++ANV E+GF+NN L+ ++ A +N ++ +C ++
Sbjct: 181 ADLSDDERKAVRGFGLMTLKPTMYIANVAEDGFENNPHLEAVQKLAAEENAIVVPLCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EIS L + D+ FL+ + ++E LN +IRA + LL L+TYFT G +E+RAWT+ G T
Sbjct: 241 EAEISLLEDEDRAEFLEAMDMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IHTD ++GFIRA ++Y DF+ + GE G K AGK R EGK Y+V+DGD+L+F
Sbjct: 301 APQAAGVIHTDFEKGFIRAECVAYDDFIQFNGENGAKEAGKWRLEGKTYIVQDGDVLHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|374702485|ref|ZP_09709355.1| GTP-binding protein YchF [Pseudomonas sp. S9]
Length = 366
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLDALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETHAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKTTRNAKGGDKDAVAQKALLEKLIPHFTAGKPART 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L L ++E I+ +LLT KP++++ANV E+GF+NN LLD ++ A + ++ +C
Sbjct: 181 LLKDLADDEKQLIRGFHLLTSKPVMYIANVAEDGFENNPLLDIVRGIADAEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL++LG E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLESLGFDEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q+A IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQSAAAIHTDFEKGFIRAEVIAYNDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|323496823|ref|ZP_08101860.1| GTP-binding protein YchF [Vibrio sinaloensis DSM 21326]
gi|323318082|gb|EGA71056.1| GTP-binding protein YchF [Vibrio sinaloensis DSM 21326]
Length = 363
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 264/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 QKILPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL +I +LN LT+KP +++ANV E+GF++N LD ++ YA +N ++ +CA +
Sbjct: 181 VELAKEELAAIGYLNFLTLKPTMYIANVNEDGFEDNPYLDAVREYAEKENNVVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L + D++ FL ++G++E LN +IR+ + LL L+TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEDEDREEFLADMGIEEPGLNRVIRSGYELLTLQTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIEFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|421138180|ref|ZP_15598250.1| translation-associated GTPase [Pseudomonas fluorescens BBc6R8]
gi|323388150|gb|ADX60346.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
fluorescens]
gi|404510603|gb|EKA24503.1| translation-associated GTPase [Pseudomonas fluorescens BBc6R8]
Length = 366
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDTRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVTRNAKGGDKDAVVQKALLEQLIAHFTLGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LLD + A + ++ +C
Sbjct: 181 LMKNMSTDEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVLAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVKV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|163761603|ref|ZP_02168674.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
gi|162281199|gb|EDQ31499.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
Length = 367
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN G + VPD RLK L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDTRLKKLAEIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRIAFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL++SDL LE+ ++ K+ K++ S+ +L +++ + L P+R
Sbjct: 121 DPVGDADTIETELMISDLESLERRTEQTRKRAAAKDKESLTVLPMMEAALKLLQDGKPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
M +L +E+L + LNLLT P+++V NV E + N + + A Q I++
Sbjct: 181 TMLKTLADEDLKILHGLNLLTSHPVLYVCNVSEADAATGNAHTEAVAKMAAEQGAESIVV 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + + + FL LGL+E L+ LIRA +SLLDL TYFTVG KE RAWTI
Sbjct: 241 SAAIESEVAQLPDEESEEFLAALGLEEAGLDRLIRAGYSLLDLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A AAG+IHTD +RGFIRA TI+Y D++ GE K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPGAAGVIHTDFERGFIRAFTIAYDDYVNLGGEVPAKEAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|398992793|ref|ZP_10695754.1| GTP-binding protein YchF [Pseudomonas sp. GM21]
gi|398136249|gb|EJM25341.1| GTP-binding protein YchF [Pseudomonas sp. GM21]
Length = 366
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLDALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRII--FNLNKSIPI 178
P D E+I ELI +DL EK + K + ++ ++ LL+++I F L K
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPART 180
Query: 179 RLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++ I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LMKNMGADDKAVIRGFHLLTTKPVMYIANVAEDGFENNPLLDIVKAIAEEEGAMVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|433447841|ref|ZP_20411217.1| GTP-dependent nucleic acid-binding protein EngD [Anoxybacillus
flavithermus TNO-09.006]
gi|431999682|gb|ELK20598.1| GTP-dependent nucleic acid-binding protein EngD [Anoxybacillus
flavithermus TNO-09.006]
Length = 366
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 251/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK + NYPFCTIEPN+GI+EVPD+RLK L +
Sbjct: 1 MGLTAGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKTLTELFNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+ P + + DIAG+V GASKGEGLGNKFL+HIR+ + + V+RCF D+ ITH++G+++
Sbjct: 61 KRTVPTVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFADENITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELI +DL ++K ID+ K K++ ++ +L R+ P R
Sbjct: 121 PIADIETINLELIFADLETVDKRIDRVGKMAKQKDKEAVFEYDILSRLKETFEAGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S EE+ +K L+LLTIKP+++VANV E + N + Q+K +A N +I++C
Sbjct: 181 LSFTEEEMKVVKQLHLLTIKPMLYVANVGEEDLADPNSNEYVQQVKAFAKEDNAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E E+++L++ +K+ FL LG++++ L+ LIRAS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKVEAEMAELDDEEKELFLQELGIEQSGLDQLIRASYSLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIH+D +RGFIRA T+SY D + + AGK+R EGK Y V+DGDI+
Sbjct: 301 GMKAPQCAGIIHSDFERGFIRAETVSYDDLVAAGSMAAAREAGKVRLEGKDYEVQDGDII 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|255745086|ref|ZP_05419035.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholera
CIRS 101]
gi|255736916|gb|EET92312.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholera
CIRS 101]
Length = 363
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 61 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 121 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV ENGF+NN LD + +A +N ++ +CA +
Sbjct: 181 VNLTKEELLAVGYLNLLTLKPTMYIANVNENGFENNPYLDAVVEFAAKENASVVAVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYF+ G KE+RAWTIP G T
Sbjct: 241 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFSAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|84515246|ref|ZP_01002608.1| GTP-binding protein YchF [Loktanella vestfoldensis SKA53]
gi|84510529|gb|EAQ06984.1| GTP-binding protein YchF [Loktanella vestfoldensis SKA53]
Length = 365
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/365 (50%), Positives = 256/365 (70%), Gaps = 4/365 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+DD ITH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFEDDDITHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA I+TEL+L+DL +EK + +K ++ +++ ++LL+ L + P R
Sbjct: 121 DPVEDAATIETELMLADLESIEKRLANLMRKVKGGDKDAVQQVRLLEAAQAALEQGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN--GFKNNLLLDQLKIYAHNQNIPIIIIC 237
++++ ++ + + L LLTIKP+++V NV+EN G N+ ++ A N ++I
Sbjct: 181 TVAVDADDAKAWRLLQLLTIKPVLYVCNVEENSAGSGNSQSARVAEMAAAEGN-SSVVIS 239
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A++EEEIS L+ + FLD +GL+E L+ LIRA ++LL L+TYFTVG KE RAWTI
Sbjct: 240 ARIEEEISQLDAEEATMFLDEMGLEEPGLDRLIRAGYALLHLQTYFTVGPKEARAWTIKA 299
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT+A QAAG+IH D +RGFIRA TI+Y DF+ GEQ K AGK+R+EGK Y V+DGD+L
Sbjct: 300 GTSAPQAAGVIHGDFERGFIRAETIAYDDFVGLGGEQPAKEAGKMRAEGKTYTVKDGDVL 359
Query: 358 NFLFN 362
+FLFN
Sbjct: 360 HFLFN 364
>gi|399008548|ref|ZP_10711018.1| GTP-binding protein YchF [Pseudomonas sp. GM17]
gi|398115984|gb|EJM05755.1| GTP-binding protein YchF [Pseudomonas sp. GM17]
Length = 366
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+DD + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDDNVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ +E IK +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMSADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|325277191|ref|ZP_08142834.1| GTP-binding protein YchF [Pseudomonas sp. TJI-51]
gi|324097677|gb|EGB95880.1| GTP-binding protein YchF [Pseudomonas sp. TJI-51]
Length = 366
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKAILEQLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ E+ I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKNMGAEDKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|378952830|ref|YP_005210318.1| protein YchF [Pseudomonas fluorescens F113]
gi|359762844|gb|AEV64923.1| YchF [Pseudomonas fluorescens F113]
Length = 366
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLDALAAIVIP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 ERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVAQKALLEQLIAHFTLGKPARS 180
Query: 181 M--SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E I+ +LLT KP++++ANV E+GF+NN LLD +K A + ++ +C
Sbjct: 181 LIKNMGADEKQIIRGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + +L+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAA +IHTD ++GFIRA I+Y DF+ YKGE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|92113645|ref|YP_573573.1| GTP-dependent nucleic acid-binding protein EngD [Chromohalobacter
salexigens DSM 3043]
gi|91796735|gb|ABE58874.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
3043]
Length = 363
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/363 (47%), Positives = 251/363 (69%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GASKGEGLGN+FLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 EKVIPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +E+ I + + ++ ++ +L RI +L + P+R
Sbjct: 121 PRADIETINLELALADLDTVERAIQRLARVVKGGDKDAMATKAILDRIQPHLAEGQPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E +K LT+KP +++ANV E+GF NN LD + A + ++ +C ++
Sbjct: 181 FGLDADETRQLKSFGFLTLKPTMYIANVNEDGFDNNPYLDVVNDIAREEGAVVVPVCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L+ ++ FL+ +G++E L+ +IRA + LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EAEIAELDEEERSVFLEEMGMEEPGLDRVIRAGYDLLGLQTYFTAGVKEVRAWTVKQGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG IHTD ++GFIRA + Y+DF+ GEQG K+AGK R EGK Y+V DGD+++F
Sbjct: 301 APEAAGAIHTDFQKGFIRAEVVGYEDFVALGGEQGAKDAGKWRLEGKDYVVADGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|229524181|ref|ZP_04413586.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
bv. albensis VL426]
gi|229337762|gb|EEO02779.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae
bv. albensis VL426]
Length = 383
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 268/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IVK
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 81 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I EL L+DL E+ I +++K+ ++ + L +L+++ L++ R
Sbjct: 141 PLEDIEIINLELALADLDSCERAILRQSKRAKGGDKEAKFELAVLEKLQPVLSEGQSARS 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
++L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 201 VNLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVQFAAQENASVVAVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 261 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK+Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGEPGAKDAGKWRLEGKEYIVKDGDVIHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|167031778|ref|YP_001667009.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
GB-1]
gi|166858266|gb|ABY96673.1| GTP-binding protein YchF [Pseudomonas putida GB-1]
Length = 366
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ + ++E I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKHMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|148545999|ref|YP_001266101.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
F1]
gi|148510057|gb|ABQ76917.1| GTP-binding protein YchF [Pseudomonas putida F1]
Length = 366
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 261/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E I+ +LLT KP++++ANV E+GF+NN LD +K A + ++ +C
Sbjct: 181 LMKNMAEDEKALIRGFHLLTSKPVMYIANVAEDGFENNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|262394978|ref|YP_003286832.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. Ex25]
gi|451971718|ref|ZP_21924935.1| GTP-dependent nucleic acid-binding protein engD [Vibrio
alginolyticus E0666]
gi|262338572|gb|ACY52367.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. Ex25]
gi|451932448|gb|EMD80125.1| GTP-dependent nucleic acid-binding protein engD [Vibrio
alginolyticus E0666]
Length = 363
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H+SG+++
Sbjct: 61 QRVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVSGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 121 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 181 VELSKEELAAIGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAEKENNVVVPVCAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L + D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 241 ESELSELEDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 301 APQAAGKIHTDFEKGFIRAEVVGYDDFIQFNGENGAKDAGKWRLEGKDYIVKDGDVVHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|254466908|ref|ZP_05080319.1| GTP-binding protein YchF [Rhodobacterales bacterium Y4I]
gi|206687816|gb|EDZ48298.1| GTP-binding protein YchF [Rhodobacterales bacterium Y4I]
Length = 365
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/364 (51%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK A N+PFCTIEPN+G + VPD RL L I K
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAEVI+TEL+L+DL +EK +K ++ + + +LL L P R
Sbjct: 121 DPVADAEVIETELMLADLESIEKRRANLVRKLKGNDKEAQQQDRLLAAAQAMLEDGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ ++ E+ + K L LLT KP+++V NV E+ + N ++ A Q +II A
Sbjct: 181 LVEVDAEDAKAWKMLQLLTTKPVLYVCNVGESESVEGNAHSAKVAEMAAAQGNSHVIISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L+ + + FL+ +GL E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 QIEEEISQLDPEEAQMFLEEMGLSEAGLDRLIRAGYDLLHLETYFTVGPKEARAWTIRQG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y DF+ GEQG K AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 TAAPQAAGVIHGDFEKGFIRAETIAYDDFVAMGGEQGAKEAGKMRAEGKSYIVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|339485703|ref|YP_004700231.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
S16]
gi|431800776|ref|YP_007227679.1| GTP-binding protein YchF [Pseudomonas putida HB3267]
gi|338836546|gb|AEJ11351.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
S16]
gi|430791541|gb|AGA71736.1| GTP-binding protein YchF [Pseudomonas putida HB3267]
Length = 366
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALAQKAILEQLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++ E+ I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKNMSAEDKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGESGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|26987455|ref|NP_742880.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
KT2440]
gi|386010379|ref|YP_005928656.1| Translation-associated GTPase [Pseudomonas putida BIRD-1]
gi|395447140|ref|YP_006387393.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
ND6]
gi|397698433|ref|YP_006536316.1| translation-associated GTPase [Pseudomonas putida DOT-T1E]
gi|421524626|ref|ZP_15971247.1| GTP-binding protein YchF [Pseudomonas putida LS46]
gi|24982118|gb|AAN66344.1|AE016263_1 GTP-binding protein, putative [Pseudomonas putida KT2440]
gi|313497085|gb|ADR58451.1| Translation-associated GTPase [Pseudomonas putida BIRD-1]
gi|388561137|gb|AFK70278.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida
ND6]
gi|397335163|gb|AFO51522.1| translation-associated GTPase [Pseudomonas putida DOT-T1E]
gi|402751089|gb|EJX11602.1| GTP-binding protein YchF [Pseudomonas putida LS46]
Length = 366
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 259/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ + ++E I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKHMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|49473971|ref|YP_032013.1| GTP-dependent nucleic acid-binding protein EngD [Bartonella
quintana str. Toulouse]
gi|49239474|emb|CAF25826.1| GTP-binding protein [Bartonella quintana str. Toulouse]
Length = 367
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDSRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I +DIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFIDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEALIILPIMEAALNLLQKGSPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L ++++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 SLLKEISSDERRILDSLNLLTSKPVLYVCNVSENDAAHGNSFTQTVEKMATTQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L L L E+ LN LIRA + LLDL TYFT G KE RAWTIP
Sbjct: 241 SASIEAEITQLNDAEAIEYLSALELFESSLNCLIRAGYHLLDLITYFTCGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAGIIH+D +RGFIRA TISY+D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGIIHSDFERGFIRAQTISYEDYIALGGENGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F +N
Sbjct: 361 ILFKYN 366
>gi|418054346|ref|ZP_12692402.1| GTP-binding protein YchF [Hyphomicrobium denitrificans 1NES1]
gi|353211971|gb|EHB77371.1| GTP-binding protein YchF [Hyphomicrobium denitrificans 1NES1]
Length = 365
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 252/363 (69%), Gaps = 2/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL+ L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQTAAAEAANYPFCTIEPNVGEVAVPDARLETLTKIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGNKFL+HIRE + V +V+RCF D+ ITH+ I
Sbjct: 61 SKEIIPTRLTFVDIAGLVRGASKGEGLGNKFLSHIREVDAVAYVLRCFVDEDITHVENRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+V++TEL+LSDL LEK I + KK ++ + ++++ + L + P R
Sbjct: 121 DPLADADVVETELMLSDLESLEKRISQIEKKAKSGDKEAKAQFAIMEKPLNLLREGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L ++ EE+ + + L LLT KP+++V NV+E+ + N +++ A + +++I A
Sbjct: 181 LAAMTPEEMPAFRALQLLTSKPVVYVCNVEESAAAEGNAYSKKVEERAKAEGAAVVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E E + L D+ FL +GL+E LN LIRA +SLLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEFAGLAPDDRDAFLAEMGLEEPGLNRLIRAGYSLLDLVTYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IHTD ++GFIRA TI+Y D++ GE G K AGK+R EGK Y+V+DGD+++
Sbjct: 301 TKAPQAAGVIHTDFEKGFIRAETIAYNDYVSGNGETGAKEAGKMRLEGKDYVVQDGDVMH 360
Query: 359 FLF 361
F F
Sbjct: 361 FRF 363
>gi|269965461|ref|ZP_06179580.1| GTP-dependent nucleic acid-binding protein engD [Vibrio
alginolyticus 40B]
gi|269829940|gb|EEZ84170.1| GTP-dependent nucleic acid-binding protein engD [Vibrio
alginolyticus 40B]
Length = 383
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 263/363 (72%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD RL L IV
Sbjct: 21 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNP 80
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GAS+GEGLGNKFLA+IRET+ + HV+RCF+++ I H+SG+++
Sbjct: 81 QRVLPTTMEFVDIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENIVHVSGKVS 140
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL ++DL E+ I + KK ++ + L +L++++ L + R
Sbjct: 141 PIEDIEVINLELAMADLDSCERAIQRNAKKAKGGDKDAKFELTVLEKLLPVLTEGGMART 200
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L+ EEL +I +LN LT+KP +++ANV E+GF+NN LD ++ +A +N ++ +CA +
Sbjct: 201 VELSKEELAAIGYLNFLTLKPTMYIANVNEDGFENNPYLDAVREFAEKENNVVVPVCAAI 260
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L + D++ FL ++G++E LN +IR+ + LL L TYFT G KE+RAWTIP G T
Sbjct: 261 ESELSELEDEDREEFLADMGIEEPGLNRVIRSGYELLTLHTYFTAGVKEVRAWTIPVGAT 320
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD ++GFIRA + Y DF+ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 321 APQAAGKIHTDFEKGFIRAEVVGYDDFIQFNGENGAKDAGKWRLEGKDYIVKDGDVVHFR 380
Query: 361 FNI 363
FN+
Sbjct: 381 FNV 383
>gi|421591130|ref|ZP_16036036.1| GTP-binding protein YchF [Rhizobium sp. Pop5]
gi|403703478|gb|EJZ19698.1| GTP-binding protein YchF [Rhizobium sp. Pop5]
Length = 367
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ L +I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D ITH+ G I
Sbjct: 61 SKELIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDSDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL LE+ ++ K+ K++ S+ +L +++ + LN+ P+R
Sbjct: 121 NPVADAETIETELMLADLESLERRTEQTRKRATGKDKDSMAMLPIMEASLKLLNEGKPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L L +E++ +K LNLLT P+++V NV E + N + A Q ++I
Sbjct: 181 TLLSKLAPDEIVILKGLNLLTSHPVLYVCNVAEGDASAGNEFTAAVAAMAKEQGAETVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L + K FL L L E L+ LIRA + LL L TYFTVG KE RAWTI
Sbjct: 241 SAAIEAEVAQLPEEEAKEFLSALDLDEAGLDRLIRAGYKLLHLITYFTVGPKETRAWTIE 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TI+Y D++ + GE G K+AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRANTIAYDDYIKFNGEVGAKDAGKARDEGKEYVVQDGDV 360
Query: 357 LNFLFN 362
++F FN
Sbjct: 361 IHFRFN 366
>gi|359786965|ref|ZP_09290038.1| GTP-binding protein YchF [Halomonas sp. GFAJ-1]
gi|359295731|gb|EHK59993.1| GTP-binding protein YchF [Halomonas sp. GFAJ-1]
Length = 363
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 254/363 (69%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I AEN+PFCTIEPN+GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAAIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+KI P ++ VDIAGLV+GASKGEGLGNKFLA+IRET + HV+RCF +D + H++ +++
Sbjct: 61 QKILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETQAIAHVVRCFDNDNVIHVANQVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P D E I EL L+DL +EK + + ++ + +L +I +L + P+R
Sbjct: 121 PRADIETINIELALADLDTVEKASQRLLRSVKGGDKDATATKAILDKIQPHLAEGQPLRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L ++E +K LT+KP +++ANV E+GF++N LD +K A + ++ +C +L
Sbjct: 181 FELTDDEKHQVKSFGFLTLKPTMYIANVNEDGFEDNPYLDIVKEIAAEEGAVVVPVCNQL 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI++L + ++ FL +G++E L+ +IRA ++LL L+TYFT G KE+RAWT+ G +
Sbjct: 241 EAEIAELEDEERSMFLAEMGMEEPGLDRVIRAGYALLGLQTYFTAGVKEVRAWTVKQGAS 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD ++GFIRA I+Y D++ GEQG K+AGK R EGK+Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFQKGFIRAEVIAYDDYVTLGGEQGAKDAGKWRLEGKEYIVKDGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|407780095|ref|ZP_11127342.1| GTP-binding protein YchF [Nitratireductor pacificus pht-3B]
gi|407298093|gb|EKF17238.1| GTP-binding protein YchF [Nitratireductor pacificus pht-3B]
Length = 367
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD RLK ++ I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRLKKISAITK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE ++TEL+L+DL LE+ + K+ K++ ++ LL ++++ + L P+R
Sbjct: 121 DPVADAETVETELMLADLESLERRTTQMQKRASGKDKEAMTLLPMMEQALALLQDGKPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIII 236
L+ + E+L ++ LNLLT KP+++V NV E + + N + A Q ++I
Sbjct: 181 LLLDGIAAEDLKILRGLNLLTSKPVLYVCNVAEADAAEGNAHSQAVATMADGQGALSVVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E E++ L++ + +L+ +GL+E L+ LIRA + LLDL T+FT G KE RAWT+
Sbjct: 241 SAAIEAEVAQLSDAEAAEYLEAMGLEEPGLDRLIRAGYELLDLITFFTSGPKETRAWTVH 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
G A QAAG+IHTD +RGFIRA TI Y+DF+ GE + AGK R EGK+Y+V DGD+
Sbjct: 301 KGAKAPQAAGVIHTDFERGFIRAQTIGYQDFVALGGETAAREAGKARDEGKEYVVTDGDV 360
Query: 357 LNFLFN 362
+ F FN
Sbjct: 361 MLFKFN 366
>gi|258626131|ref|ZP_05720979.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus
VM603]
gi|258581486|gb|EEW06387.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus
VM603]
Length = 369
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 265/363 (73%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M KCG++GLPNVGKSTLFNALTK I A N+PFCTIEPN G++ VPD L L IVK
Sbjct: 7 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPCLDALAEIVKP 66
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+++ I H++G+++
Sbjct: 67 ERILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVS 126
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL L+DL E+ I ++NK+ ++ + L +L+++ L++ R
Sbjct: 127 PLEDIEVINLELALADLDSCERAILRQNKRAKGGDKEAKFELTVLEKLQPVLSEGQSARS 186
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EEL+++ +LNLLT+KP +++ANV E+GF+NN LD + +A +N ++ +CA +
Sbjct: 187 VKLTKEELLAVGYLNLLTLKPTMYIANVNEDGFENNPYLDAVVQFAAQENASVVAVCAAI 246
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E+S+L ++ FL +LG++E LN +IR+ + LL+L+TYFT G KE+RAWTIP G T
Sbjct: 247 EAELSELEEEERDEFLADLGIEEPGLNRVIRSGYDLLNLQTYFTAGVKEVRAWTIPVGAT 306
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG IHTD +RGFIRA I Y D++ + GE G K+AGK R EGK Y+V+DGD+++F
Sbjct: 307 APQAAGKIHTDFERGFIRAEVIGYNDYIQFNGESGAKDAGKWRLEGKDYIVKDGDVIHFR 366
Query: 361 FNI 363
FN+
Sbjct: 367 FNV 369
>gi|374607103|ref|ZP_09679908.1| GTP-binding protein YchF [Paenibacillus dendritiformis C454]
gi|374387322|gb|EHQ58839.1| GTP-binding protein YchF [Paenibacillus dendritiformis C454]
Length = 366
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/369 (48%), Positives = 257/369 (69%), Gaps = 9/369 (2%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G++N
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE---HSIELLKLLKRIIFNLNKSIP 177
P+ D + I ELIL+DL +EK +D+ K ++ E+L+ LK +++N P
Sbjct: 121 PVSDIQTINLELILADLESVEKRLDRTKKNMKSGDKKFAQEAEVLERLKEVLYN---DQP 177
Query: 178 IRLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPII 234
R + L ++E + ++ L+LLT+KP+++ ANV E+G NN + Q++ +A +N ++
Sbjct: 178 ARSLDLTDDEKLLVRDLHLLTMKPVLYAANVSEDGVTDADNNPYVQQVRDFAAQENAEVV 237
Query: 235 IICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWT 294
I AK+E EI++L+ DK+ FL LGL+E+ LN LI+A++ LL L TYFT G +E+RAWT
Sbjct: 238 PISAKVEAEIAELDGEDKEMFLQELGLEESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWT 297
Query: 295 IPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDG 354
I G A QAAG+IHTD +RGFIRA +SY D + K GK+R EGK+Y+V+DG
Sbjct: 298 IRKGMKAPQAAGVIHTDFERGFIRAEVVSYDDLVAAGSMNVVKEQGKLRLEGKEYVVQDG 357
Query: 355 DILNFLFNI 363
D+++F FN+
Sbjct: 358 DVMHFRFNV 366
>gi|253574237|ref|ZP_04851579.1| GTP-binding protein YchF [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251846714|gb|EES74720.1| GTP-binding protein YchF [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+ P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+IN
Sbjct: 61 NRTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKIN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ +EK I++ K N+ + +++L+RI L P R
Sbjct: 121 PISDIQTINLELILADVESVEKRIERAKKNMKGGNKQYAQEVEVLERIKEALYNDQPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
+ L +EE + ++ L+LLT+KP+++ ANV E+G NN + Q+K +A + ++ I
Sbjct: 181 VELTDEEKLIVRDLHLLTLKPVLYAANVSEDGVSDADNNPFVQQVKEFAAAEGAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DKK FL+ LGL + L+ LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKKMFLEELGLNASGLDRLIQAAYRLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IH+D +RGFIRA +SY+D + + G++R EGK Y+V+DGDI+
Sbjct: 301 GTKAPQAAGVIHSDFERGFIRAEVVSYEDLVAAGSMSAARERGQLRLEGKDYVVQDGDIM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|388547172|ref|ZP_10150440.1| GTP-binding protein YchF [Pseudomonas sp. M47T1]
gi|388274747|gb|EIK94341.1| GTP-binding protein YchF [Pseudomonas sp. M47T1]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S +N
Sbjct: 61 KRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVLQKGLLEQLISHFTDGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ +E + I+ +LLT KP++++ANV E+GF NN LD ++ A + ++ +C
Sbjct: 181 LMKNMGVDEKLVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVRAIAEEEGAIVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVEEVRAWTVKI 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA I+Y DF+ Y GE G K AGK R EGK+Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQYNGEAGTKEAGKWRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|381210650|ref|ZP_09917721.1| GTP-binding protein YchF [Lentibacillus sp. Grbi]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/366 (47%), Positives = 258/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M+L G++GLPNVGKSTLFNA+T+ A NYPF TI+PN+GI+EVPD RL L+ +VK
Sbjct: 1 MSLTAGIVGLPNVGKSTLFNAITQAGAEAANYPFATIDPNVGIVEVPDNRLNKLSELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGN+FL+HIR+ + ++ V+RCF++D ITH+SG+I+
Sbjct: 61 KKTVPTTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAIVQVVRCFQNDNITHVSGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELIL+DL + K + + K K + ++ LL+++ L +P+R
Sbjct: 121 PVDDIETINLELILADLETVNKRLQRVEKMARQKEKEAVAEYNLLEKLKEGLEAELPVRA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ + ++ +K L+LLT KP ++ ANV E+ + N + +++ YA N+N +I++C
Sbjct: 181 LEFSEDQWKLVKGLHLLTSKPALYAANVSEDDVADPEANEAVQRVREYAANENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEE+++L+ +K+ FLD+LG+ E L+ LI+AS++LL L TYFT G+ E+RAWT P
Sbjct: 241 AKIEEEVAELDAEEKEMFLDDLGIAEAGLDQLIKASYNLLGLGTYFTAGEPEVRAWTFPK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A QAAGIIHTD +RGFIRA T+SY+D + ++ G++R EGK+Y+V+DGD++
Sbjct: 301 GIKAPQAAGIIHTDFERGFIRAETVSYEDLMEAGTMSKARDNGRVRLEGKEYIVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|375364499|ref|YP_005132538.1| putative GTP-binding protein YLF2 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|384267605|ref|YP_005423312.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385267007|ref|ZP_10045094.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus sp. 5B6]
gi|387900746|ref|YP_006331042.1| translation-associated GTPase [Bacillus amyloliquefaciens Y2]
gi|394994131|ref|ZP_10386861.1| GTP-binding protein YchF [Bacillus sp. 916]
gi|421729522|ref|ZP_16168652.1| GTP-binding protein YchF [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429507377|ref|YP_007188561.1| GTP-binding protein YchF [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451344776|ref|YP_007443407.1| GTP-binding protein YchF [Bacillus amyloliquefaciens IT-45]
gi|452857684|ref|YP_007499367.1| putative GTPase with RNA binding site [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|371570493|emb|CCF07343.1| putative GTP-binding protein YLF2 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|380500958|emb|CCG51996.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385151503|gb|EIF15440.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus sp. 5B6]
gi|387174856|gb|AFJ64317.1| translation-associated GTPase [Bacillus amyloliquefaciens Y2]
gi|393805017|gb|EJD66406.1| GTP-binding protein YchF [Bacillus sp. 916]
gi|407076492|gb|EKE49475.1| GTP-binding protein YchF [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429488967|gb|AFZ92891.1| GTP-binding protein YchF [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449848534|gb|AGF25526.1| GTP-binding protein YchF [Bacillus amyloliquefaciens IT-45]
gi|452081944|emb|CCP23718.1| putative GTPase with RNA binding site [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ +L ++ + P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFDILSKLKEAFEQEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KP+++VANV E+ +N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPVLYVANVSEDEVADPSDNEYVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGGMSGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|254780226|ref|YP_003064639.1| translation-associated GTPase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254039903|gb|ACT56699.1| translation-associated GTPase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 367
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/371 (53%), Positives = 258/371 (69%), Gaps = 12/371 (3%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKL-KISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG+IGLPNVGKSTLFNALT+ A NYPFCTIEPN G + VPD R+ L I +
Sbjct: 1 MGFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAE 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K + P + VDIAGLV GASKGEGLGN+FLAHIRE + +IHV+RCFKD+ I H+ G I
Sbjct: 61 SKDLVPTRMSFVDIAGLVRGASKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFN----LNKS 175
+PI+D E I+TEL+LSDL LE+ +K NKK+ H E + LL+ II + + +
Sbjct: 121 DPINDIETIETELMLSDLERLERLFEK-NKKY---RNHKSEEIVLLQSIISSSLRLIEEG 176
Query: 176 IPIR--LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK-NNLLLDQLKIYAHNQNIP 232
P+R L SL+++ + K LNLLT KPI+++ NV E+ K N+ + ++ A QN
Sbjct: 177 KPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAE 236
Query: 233 IIIICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRA 292
+III A +E EIS L ++ F++ L + + L LIR+ + LLDL TYFTVG KE RA
Sbjct: 237 MIIISAAIEAEISQLPEEERALFMEELDISISGLELLIRSGYRLLDLITYFTVGPKETRA 296
Query: 293 WTIPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVE 352
WTIP GT A++AAG+IHTD ++GFIRALTISYKD++ GE K AGK R EGK+Y+V+
Sbjct: 297 WTIPRGTNAQKAAGVIHTDFEKGFIRALTISYKDYVAMGGENAAKEAGKARDEGKEYIVK 356
Query: 353 DGDILNFLFNI 363
DGDIL+F FN+
Sbjct: 357 DGDILHFRFNV 367
>gi|404497694|ref|YP_006721800.1| GTP-binding protein YchF [Geobacter metallireducens GS-15]
gi|418067968|ref|ZP_12705294.1| GTP-binding protein YchF [Geobacter metallireducens RCH3]
gi|78195296|gb|ABB33063.1| GTP-dependent translational factor YchF, putative [Geobacter
metallireducens GS-15]
gi|373557862|gb|EHP84242.1| GTP-binding protein YchF [Geobacter metallireducens RCH3]
Length = 364
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/364 (47%), Positives = 254/364 (69%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKST+FNALT + NYPFCTI+PN+GI++VPD+RL+ L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDERLERLAEIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P I+ VDIAGLV GAS+GEGLGN+FL HIR + ++HV+RCF D+ + H+SG ++
Sbjct: 61 ERILPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFDDENVVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVIQTEL L+DL +EK + K+ + + + R+ L K P R
Sbjct: 121 PIRDIEVIQTELALADLDSVEKKFQRVEKQAKGGDRKLKDESEFYARVKGALEKGTPGRH 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICAK 239
+ + ++E + ++ L+LLT KP+++VANV E+ + + + +++ A ++ +++IC +
Sbjct: 181 VEVGDDERLWMRDLHLLTDKPVLYVANVAEDDLEGAHPFVAKVRDLAESEGARVVVICGR 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI++L+ +KK FL +GL E+ L+ LIR + LL L TYFT GKKE+RAWTIP GT
Sbjct: 241 IESEIAELDGDEKKVFLAEMGLAESGLDRLIRMGYDLLGLITYFTAGKKEVRAWTIPAGT 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IH+D ++GFIRA I+Y+DF+ GE G K G +R EGK+Y+V+DGD+++F
Sbjct: 301 KAPQAAGVIHSDFEKGFIRAEVIAYRDFVAAGGETGAKEKGLMRLEGKEYVVQDGDVMHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|104780082|ref|YP_606580.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas
entomophila L48]
gi|95109069|emb|CAK13765.1| putative GTP-binding protein [Pseudomonas entomophila L48]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H+S ++
Sbjct: 61 NRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D E+I ELI +DL EK + K + ++ ++ +L+++I + + P R
Sbjct: 121 PKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKAILEKLIPHFTEGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++E I+ +LLT KP++++ANV E+GF NN LD +K A + ++ +C
Sbjct: 181 LMKNMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDVVKAIAKEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L+ ++K FL+ LGL+E LN +IRA + LL+L+TYFT G +E+RAWT+
Sbjct: 241 KIEAEIAELDEGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA QAAG+IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEGGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|408357761|ref|YP_006846292.1| GTP-dependent nucleic acid-binding protein EngD [Amphibacillus
xylanus NBRC 15112]
gi|407728532|dbj|BAM48530.1| GTP-dependent nucleic acid-binding protein EngD [Amphibacillus
xylanus NBRC 15112]
Length = 366
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ A NYPFCTI+PN+GI+EVPD RL L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAEAANYPFCTIDPNVGIVEVPDHRLSKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGN+FL+HIR+ + + HV+RCF+D+ ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFQDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL + K ID+ K K++ +I ++L ++ P R
Sbjct: 121 PIADIETINLELILADLETISKRIDRVEKLARQKDKDAIFEFEILSKLRDAFEVERPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ +E++ +K L+LLT KP+++VANV E+G ++ N + +++ YA + +++I
Sbjct: 181 IEFTDEQIKYVKGLHLLTQKPVLYVANVSEDGIQDADQNPYVQKVREYAEQEQAEVVVIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L+ +K+ FL+ LG+ E+ L+ LIRA++ LL L TYFT G++E+RAWT
Sbjct: 241 AKVESEIAELDGEEKQMFLEELGIPESGLDQLIRATYHLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAGIIHTD +RGFIRA T+SY D L + GK+R EGK+Y+V+DGD++
Sbjct: 301 GTKAPQAAGIIHTDFERGFIRAETVSYDDLLDAGSMAVARERGKVRLEGKEYIVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|308175798|ref|YP_003922503.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens DSM 7]
gi|384161686|ref|YP_005543759.1| GTP-binding protein YchF [Bacillus amyloliquefaciens TA208]
gi|384166608|ref|YP_005547987.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens LL3]
gi|384170799|ref|YP_005552177.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens XH7]
gi|307608662|emb|CBI45033.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens DSM 7]
gi|328555774|gb|AEB26266.1| GTP-binding protein YchF [Bacillus amyloliquefaciens TA208]
gi|328914163|gb|AEB65759.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens LL3]
gi|341830078|gb|AEK91329.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens XH7]
Length = 366
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ +L ++ + P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFDILSKLKEAFEQEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KP+++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPVLYVANVSEDEVADPSGNEYVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGGMSGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|154688196|ref|YP_001423357.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
amyloliquefaciens FZB42]
gi|154354047|gb|ABS76126.1| EngD [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ +L ++ + P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFDILSKLKEAFEQEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KP+++VANV E+ +N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPVLYVANVSEDEVADPSDNGYVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGGMSGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|414160172|ref|ZP_11416443.1| GTP-dependent nucleic acid-binding protein engD [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878822|gb|EKS26692.1| GTP-dependent nucleic acid-binding protein engD [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 365
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 254/365 (69%), Gaps = 2/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +IV
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLDALADIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK+ P + DIAG+V GASKGEGLGNKFL+HIRE + + V+R F DD +TH+SG ++
Sbjct: 61 KKVLPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVSGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL+L+DL ++K + + K K++ ++ +++L+RI L PIR
Sbjct: 121 PLDDIEVINMELVLADLESVDKRLPRLEKMARQKDKDALNEVRILERIKEALENGEPIRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF--KNNLLLDQLKIYAHNQNIPIIIICA 238
+ N E+ +K LLT KP+I++ANV E+ +N + +K YA + +I+I A
Sbjct: 181 LEFNEEDAKYVKQAQLLTSKPMIYIANVGEDEVNEADNEKVQTIKEYADKEGSEVIVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+EEEI+ L++ DK FL++LG++E LN LIR++++LL L TYFT G +E+RAWT G
Sbjct: 241 KIEEEIATLDDEDKDMFLEDLGIEEPGLNRLIRSTYNLLGLATYFTAGVQEVRAWTFKKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
TA Q AGIIHTD +RGFIRA SY D++ GEQG K AGK+R EGK+Y+++DGD+++
Sbjct: 301 MTAPQCAGIIHTDFERGFIRAEVTSYDDYVENNGEQGAKEAGKMRLEGKEYIMQDGDVVH 360
Query: 359 FLFNI 363
F FN+
Sbjct: 361 FRFNV 365
>gi|374320834|ref|YP_005073963.1| GTP-binding protein YchF [Paenibacillus terrae HPL-003]
gi|357199843|gb|AET57740.1| GTP-binding protein YchF [Paenibacillus terrae HPL-003]
Length = 366
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+I+
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ ++K I++ K N+ + +++L+RI +L P R
Sbjct: 121 PISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYTQEVEVLERIKESLYADKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L++EE + ++ L+LLT+KP+++ ANV E+G +N + +++ +A +N ++ I
Sbjct: 181 VELSDEEQLIVRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVRDFAVAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVESEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A AAG+IHTD +RGFIRA +SY D + G K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPGAAGVIHTDFERGFIRAEVVSYNDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|403385763|ref|ZP_10927820.1| GTP-dependent nucleic acid-binding protein [Kurthia sp. JC30]
Length = 366
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 258/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVEP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GAS+GEGLGNKFL+HIRE + + V+RCF+D+ ITH++G+++
Sbjct: 61 KKTVPTSFEFTDIAGIVKGASQGEGLGNKFLSHIREVDAITQVVRCFEDENITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI ELIL+DL ++K K +K K++ S+ +L+++ +P R
Sbjct: 121 PISDIEVINLELILADLESVDKRYAKVSKLAKQKDKESMAEAAVLEKVKEAFANEMPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L++EE IK L+LLT+KP ++VANV E+ N N + Q++ YA + +I++C
Sbjct: 181 VDLDDEEKKIIKGLSLLTLKPALYVANVSEDEVANAEDNEYVKQVREYAAKEGAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEI+ L++ +K FL+ LG++E+ L+ LI+A++SLL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEIAQLDDEEKAMFLEELGIEESGLDKLIKAAYSLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIH+D +RGFIRA T+S++D + Y + K AG++R EGK+Y+V+DGD++
Sbjct: 301 GMKAPQCAGIIHSDFERGFIRAETVSFEDLVEYGSKTAAKEAGRLRLEGKEYVVKDGDVM 360
Query: 358 NFLFNI 363
FLFN+
Sbjct: 361 EFLFNV 366
>gi|75676694|ref|YP_319115.1| GTP-dependent nucleic acid-binding protein EngD [Nitrobacter
winogradskyi Nb-255]
gi|74421564|gb|ABA05763.1| Conserved hypothetical protein 92 [Nitrobacter winogradskyi Nb-255]
Length = 365
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 247/364 (67%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L + K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLGRLAEVAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ + E L L++R + L P R
Sbjct: 121 APLADIETIETELMLADLESLEKRVDNLSKKAKGNDKEAREQLDLVERALSLLRDGQPTR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKI-YAHNQNIPIIIICA 238
M EE + + L LLT KP+++V NV+E+ Q +A + ++I A
Sbjct: 181 GMERKPEEERNFRMLGLLTSKPVLYVCNVEESSAAGGNAFSQAVFDHAAKEGAIAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FL+ LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSRDERADFLETLGLEEAGLDRLIRAGYRLLDLITYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y D+ GE G ++AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYADYAALGGEAGARDAGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|92118569|ref|YP_578298.1| GTP-dependent nucleic acid-binding protein EngD [Nitrobacter
hamburgensis X14]
gi|91801463|gb|ABE63838.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 365
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/364 (51%), Positives = 246/364 (67%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L + K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDQLAAVAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ + E L L++R + L + P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDTLSKKAKGNDKEAKEQLDLVERALKLLREGKPTR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKI-YAHNQNIPIIIICA 238
M EE + + L LLT KP+++V NV+E Q +A + + I A
Sbjct: 181 GMERKPEEERNFRMLGLLTSKPVLYVCNVEEGSAAGGNAFSQAVFDHATKEGAVAVAISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSREERADFLDTLGLEEAGLDRLIRAGYRLLDLITYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y D+ GE G ++AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYADYAALGGEAGARDAGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|338737771|ref|YP_004674733.1| GTP-dependent nucleic acid-binding protein [Hyphomicrobium sp. MC1]
gi|337758334|emb|CCB64159.1| GTP-dependent nucleic acid-binding protein [Hyphomicrobium sp. MC1]
Length = 365
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 248/363 (68%), Gaps = 2/363 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPDKRL L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTQTAQAEAANYPFCTIEPNVGEVAVPDKRLDTLAGIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGNKFL+HIRE + V +V+RCF D+ ITH+ I
Sbjct: 61 SKEIIPTRLTFVDIAGLVRGASKGEGLGNKFLSHIREVDAVAYVLRCFVDEDITHVENRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+V++TEL+L+DL LEK I + KK ++ + ++++ + L + P R
Sbjct: 121 DPLADADVVETELMLADLESLEKRISQIEKKAKSGDKEAKAQYAVMEKPLVLLREGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICA 238
L + EE+ + + L LLT KP+++V NV+E N N Q++ A +N +++I A
Sbjct: 181 LAQMTAEEMPAFRALQLLTSKPVVYVCNVEEASAANGNAYSKQVEERAKAENAAVVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E E + L D+ FL +GL E LN LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIESEFAGLAPEDRDAFLSEMGLDEPGLNRLIRAGYDLLHLVTYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IHTD ++GFIRA TI++ D++ GE G K AGK+R EGK Y+V+DGD+++
Sbjct: 301 TKAPQAAGVIHTDFEKGFIRAETIAFDDYVTGNGETGAKEAGKMRLEGKDYVVQDGDVMH 360
Query: 359 FLF 361
F F
Sbjct: 361 FRF 363
>gi|285017305|ref|YP_003375016.1| GTP-binding protein [Xanthomonas albilineans GPE PC73]
gi|283472523|emb|CBA15028.1| putative gtp-binding protein [Xanthomonas albilineans GPE PC73]
Length = 363
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLGALAAIIHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++ +++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEHGDIIHVNNKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I EL L+DL +EK +++ + ++ + +L ++ L P R
Sbjct: 121 PVSDIETIDIELALADLDSVEKALNRAERAAKGGDKDAAARKPVLAKLQAALADGKPGRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF+NN L+ ++ A + ++ + A +
Sbjct: 181 AGLDEEEKTLVRDLFLLTLKPVMYIANVLEDGFENNPHLEAVRARAAAEGAQVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL+E LN +IRA+++LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDADRDAFLVDLGLQEPGLNRVIRAAYALLGLQTYFTAGVKEVRAWTVKVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ YKGE G + AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEAGAREAGRLRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|403530236|ref|YP_006664765.1| GTP-dependent nucleic acid-binding protein EngD [Bartonella
quintana RM-11]
gi|403232308|gb|AFR26051.1| GTP-dependent nucleic acid-binding protein EngD [Bartonella
quintana RM-11]
Length = 367
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDSRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I +DIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFIDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDNDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEALIILPIMEAALNLLQKGSPVR 180
Query: 180 --LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L ++++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 SLLKEISSDERRILDSLNLLTSKPVLYVCNVSENDAAHGNSFTQTVEKMATTQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L L L E+ LN LIRA + LLDL TYFT G KE RAWTIP
Sbjct: 241 SASIEAEITQLNDAEAIEYLSALELVESSLNCLIRAGYHLLDLITYFTCGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAGIIH+D +RGFIRA TISY+D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGIIHSDFERGFIRAQTISYEDYIALGGENGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F +N
Sbjct: 361 ILFKYN 366
>gi|238756927|ref|ZP_04618115.1| GTP-dependent nucleic acid-binding protein engD [Yersinia aldovae
ATCC 35236]
gi|238704757|gb|EEP97286.1| GTP-dependent nucleic acid-binding protein engD [Yersinia aldovae
ATCC 35236]
Length = 351
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 259/351 (73%)
Query: 13 VGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKKIFPAIIKLVD 72
+GKSTLFNALT+ I A N+PFCTIEPN G++ +PD RL L IVK ++I P ++ VD
Sbjct: 1 MGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILPTTMEFVD 60
Query: 73 IAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPIHDAEVIQTEL 132
IAGLV GASKGEGLGN+FL +IRET + HV+RCF++D I H++G+++P+ D + I TEL
Sbjct: 61 IAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDIDTINTEL 120
Query: 133 ILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMSLNNEELMSIK 192
LSDL E+ I + KK ++ + L+ L++ + +L + +R ++L+ E+ +I+
Sbjct: 121 ALSDLETCERAIHRVQKKAKGGDKDAKAELEALEKCLPHLENAGMLRALNLSAEDKAAIR 180
Query: 193 FLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKLEEEISDLNNIDK 252
+L+ LT+KP +++ANV E+GF+NN LDQ++ A + ++ +CA +E +I++L + D+
Sbjct: 181 YLSFLTLKPTMYIANVNEDGFENNPYLDQVRAIAAAEGSVVVAVCAAVESDIAELEDADR 240
Query: 253 KFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTTAEQAAGIIHTDI 312
F+ LG++E LN +IRA + LL+L+TYFT G KE+RAWTIP G TA QAAG IHTD
Sbjct: 241 AEFMAELGIEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPIGATAPQAAGKIHTDF 300
Query: 313 KRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFLFNI 363
++GFIRA TI++ DF+ YKGEQG K AGK+RSEGK+Y+V+DGD++NFLFN+
Sbjct: 301 EKGFIRAQTIAFDDFITYKGEQGAKEAGKMRSEGKEYIVKDGDVMNFLFNV 351
>gi|308071170|ref|YP_003872775.1| GTP-dependent nucleic acid-binding protein engD [Paenibacillus
polymyxa E681]
gi|305860449|gb|ADM72237.1| GTP-dependent nucleic acid-binding protein engD [Paenibacillus
polymyxa E681]
Length = 366
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+I+
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ ++K I++ K N+ + +++L+RI L P R
Sbjct: 121 PISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYTQEVEVLERIKETLYADKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L++EE + ++ L+LLT+KP+++ ANV E+G +N + +++ +A +N ++ I
Sbjct: 181 LELSDEERLIVRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVRDFAVAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVESEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A AAG+IHTD +RGFIRA +SY D + G K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPGAAGVIHTDFERGFIRAEVVSYNDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|159043506|ref|YP_001532300.1| GTP-dependent nucleic acid-binding protein EngD [Dinoroseobacter
shibae DFL 12]
gi|157911266|gb|ABV92699.1| GTP-binding protein YchF [Dinoroseobacter shibae DFL 12]
Length = 365
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDPRLDRLAEIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+D +TH+ G +
Sbjct: 61 SKQVIPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA I+TEL+L+D+ +EK + +K ++ +++ +L++ + L + P R
Sbjct: 121 DPIADAATIETELMLADMESIEKRLQNIVRKVRGGDKEAVQQERLMRAAMAALEEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
++++ E+ + + L LLT KPI++V NV E + N + A Q ++I A
Sbjct: 181 AVAVDAEDAKAWRMLQLLTTKPILYVCNVDEASAGSGNAHSKAVATMAAEQGAAHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L+ + + FL +GL+E L+ LI+A ++LL L TYFT G KE RAWTIP G
Sbjct: 241 QIEEEISQLDPEEAEMFLSEMGLEEAGLDRLIKAGYALLHLETYFTAGPKEARAWTIPAG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D +RGFIRA TI+Y D++ GEQ K AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 THAPQAAGVIHGDFERGFIRAETIAYDDYVALGGEQAAKEAGKMRAEGKSYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|440747097|ref|ZP_20926358.1| GTP-binding and nucleic acid-binding protein YchF [Mariniradius
saccharolyticus AK6]
gi|436484726|gb|ELP40702.1| GTP-binding and nucleic acid-binding protein YchF [Mariniradius
saccharolyticus AK6]
Length = 365
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/365 (50%), Positives = 256/365 (70%), Gaps = 2/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKSTLFNA++ K A N+PFCTIEPN+G++ VPDKRL L +VK
Sbjct: 1 MGLQCGIVGLPNVGKSTLFNAISSAKAEAANFPFCTIEPNVGVVTVPDKRLGILEGLVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P +I+ VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+DD I H++G ++
Sbjct: 61 QRVIPTVIEFVDIAGLVKGASKGEGLGNKFLANIREVDAIIHVVRCFEDDNIVHVAGGVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI TEL L DL +EK I + K + + + +++L + L + R
Sbjct: 121 PVFDKEVIDTELQLKDLESIEKKIQRFEKIAKSGDAKAKKDVEILNKFKDGLQSGLNARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
+ + E+L ++ L+LLTIKP+++VANV E N N +DQL+ ++N +I++CA
Sbjct: 181 VDVEKEDLEVVRDLHLLTIKPVLYVANVDEKNILTGNKYVDQLREAVKSENAEVIVLCAA 240
Query: 240 LEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
+E +I++ + D+K FL GL E+ LN LI A++ LLDL TYFT G +E+RAWTI G
Sbjct: 241 IESQIAEFEDADEKAMFLSEYGLDESGLNKLIAAAYKLLDLITYFTAGVQEVRAWTIKKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
A QAAG+IHTD +RGFI+A I D+ LYK E GC+ GKI EGK+Y+V+DGDI++
Sbjct: 301 WKAPQAAGVIHTDFERGFIKAEVIKLSDYELYKSEAGCRENGKIAIEGKEYIVQDGDIMH 360
Query: 359 FLFNI 363
F FN+
Sbjct: 361 FRFNV 365
>gi|365898283|ref|ZP_09436249.1| putative GTP-dependent nucleic acid-binding protein (engD)
[Bradyrhizobium sp. STM 3843]
gi|365420971|emb|CCE08791.1| putative GTP-dependent nucleic acid-binding protein (engD)
[Bradyrhizobium sp. STM 3843]
Length = 365
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+D ITH+ G+I
Sbjct: 61 SGQIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D KK ++ + E +L+ R + L P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDNLAKKAKGNDKDAKEQYELVTRALELLRDGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICA 238
L+ EE + L LLT KP+++V NV+E+ KN N Q+ A + ++I A
Sbjct: 181 LLERKAEEERAFGMLGLLTSKPVLYVCNVEESSAKNGNSFSRQVFENAEKEGAVAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSREERTEFLDTLGLEEAGLDRLIRAGYQLLDLITYFTVGPKEARAWTIHRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y D++ + GE G + AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYADYVAFNGEAGAREAGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|395793131|ref|ZP_10472536.1| GTP-binding protein YchF [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713668|ref|ZP_17687928.1| GTP-binding protein YchF [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395422139|gb|EJF88355.1| GTP-binding protein YchF [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395431445|gb|EJF97463.1| GTP-binding protein YchF [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 367
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEALTILPMMEAALNLLQKGSPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKEISSDERRILDNLNLLTSKPVLYVCNVSENDAAHGNNFTKMVEKMATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+++ +L L L E LN LIRA +SLLDL TYFT G KE RAWTI
Sbjct: 241 SAAIEAEITQLNDVEASEYLHALELFEPSLNRLIRAGYSLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYDDYIALGGENGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|407798251|ref|ZP_11145159.1| GTP-binding protein YchF [Oceaniovalibus guishaninsula JLT2003]
gi|407059687|gb|EKE45615.1| GTP-binding protein YchF [Oceaniovalibus guishaninsula JLT2003]
Length = 365
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/364 (48%), Positives = 252/364 (69%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M + G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I K
Sbjct: 1 MGFRMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDRLAAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P + VDIAGLV GAS+GEGLGN+FLA+IRE + + HV+RCF+DD ITH+ G +
Sbjct: 61 SKQVVPTRMTFVDIAGLVKGASRGEGLGNQFLANIRECDAIAHVLRCFEDDDITHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+L+DL +E+ + +K ++ +++ +LL L + P R
Sbjct: 121 DPVADAQTIETELMLADLESVERRLTNIVRKVRGGDKEAVQQERLLTAAQAALEQGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ +++E+ + + L LLT KPI++V NV E + N L ++++ A + ++I A
Sbjct: 181 SVPVDDEDGKAWRMLQLLTAKPILYVCNVSEDDAATGNALTERVRQMAVAEGAAEVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEI+ L + FL +GL+E L+ LIRA ++LL L+TYFTVG KE RAWTIP G
Sbjct: 241 RIEEEIAQLPADEAAEFLAEMGLEEPGLDRLIRAGYALLGLQTYFTVGPKEARAWTIPAG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D +RGFIR+ TI+Y DF+ GE G K AGK+R EGK Y V+DGD+L+
Sbjct: 301 TRAPQAAGVIHGDFERGFIRSETIAYDDFVALGGEAGAKEAGKMRVEGKGYEVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|430756770|ref|YP_007207422.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|430021290|gb|AGA21896.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
subsp. subtilis str. BSP1]
Length = 366
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VELTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|403669898|ref|ZP_10935074.1| GTP-dependent nucleic acid-binding protein [Kurthia sp. JC8E]
Length = 366
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTEMVEP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK + DIAG+V GAS+GEGLGNKFL+HIRE + + V+RCF+D+ ITH++G+++
Sbjct: 61 KKTVATSFEFTDIAGIVKGASQGEGLGNKFLSHIREVDAITQVVRCFEDENITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI ELIL+DL ++K K +K K++ S+E +L+++ +P R
Sbjct: 121 PISDIEVINLELILADLESVDKRYAKVSKLAKQKDKESMEEAAVLEKVKEAFANEMPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L +EE IK L+LLT+KP ++VANV E+ N N + Q++ YA + +I++C
Sbjct: 181 VDLTDEEKKIIKGLSLLTLKPALYVANVSEDEVSNSEENDYVKQVREYAAKEGAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEI+ L++ +K FL+ LG++E+ L+ LI+A++SLL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEIAQLDDDEKAMFLEELGIQESGLDKLIKAAYSLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIH+D +RGFIRA TISY+D + + + K AG++R EGK+Y+V DGD++
Sbjct: 301 GMKAPQCAGIIHSDFERGFIRAETISYEDLVEFGSKSAAKEAGRLRLEGKEYVVNDGDVM 360
Query: 358 NFLFNI 363
FLFN+
Sbjct: 361 EFLFNV 366
>gi|416240519|ref|ZP_11632490.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC1]
gi|416249462|ref|ZP_11636559.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis CO72]
gi|326565839|gb|EGE16001.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC1]
gi|326575634|gb|EGE25557.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis CO72]
Length = 363
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G++N
Sbjct: 61 ERTIPTSMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + I NKK ++ + L + ++I L P RL
Sbjct: 121 PLSDIETINTELALADLEAVTRAITNLNKKAKGGDKDAQAALGVFQKIEPLLADGKPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E IK L+T+KP++++ANV E+GF NN LD ++ +A+N+N ++ +C ++
Sbjct: 181 ADLDADEKKLIKSYGLITLKPVMYIANVAEDGFDNNPHLDAVREFANNENAIVVALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ +K FL+ +G+ E L+ +IRA + LL+L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIAQLDEEEKAEFLEGMGMSEAGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA I Y DF+ Y GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFERGFIRAEVIGYDDFIEYGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|319651084|ref|ZP_08005218.1| YyaF protein [Bacillus sp. 2_A_57_CT2]
gi|317397254|gb|EFV77958.1| YyaF protein [Bacillus sp. 2_A_57_CT2]
Length = 366
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLNKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIRE + + V+RCF DD ITH++G+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFADDNITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI ELIL+DL +EK I + +K K++ S+ L++L+++ P R
Sbjct: 121 PIDDIEVINLELILADLESVEKRIGRVSKLAKQKDKDSVFELEILEKLKEAFEADKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E++ +K L+LLTIKP+++VANV E+ + N + Q+K +A N +I+IC
Sbjct: 181 VEFTEEQMKLVKGLHLLTIKPVLYVANVSEDDVADPSSNEYVQQVKEFAAKDNAEVIVIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L+ +K+ FL LG++E+ L+ LIRA+++LL L TYFT G +E+RAWT
Sbjct: 241 AKIESEIAELDGEEKEMFLQELGIEESGLDQLIRAAYNLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AG+IH+D ++GFIRA T+SY+D + K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPQCAGVIHSDFEKGFIRAETVSYEDLVAAGNMTAAKEAGKVRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|85716023|ref|ZP_01047000.1| hypothetical protein NB311A_14440 [Nitrobacter sp. Nb-311A]
gi|85697221|gb|EAQ35102.1| hypothetical protein NB311A_14440 [Nitrobacter sp. Nb-311A]
Length = 365
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/364 (51%), Positives = 246/364 (67%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLGRLAEIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ + E L L++R + L P R
Sbjct: 121 APLADIETIETELMLADLESLEKRVDNLSKKAKGNDKEAKEQLDLVERALKLLRDGEPTR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKI-YAHNQNIPIIIICA 238
M EE S + L LLT KP+++V NV+E + Q +A + ++I A
Sbjct: 181 GMERKPEEERSFRMLGLLTSKPVLYVCNVEEGSAASGNAFSQAVFDHAAKEGAIAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FL+ LGL+E L+ LIRA + LLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSRDERADFLETLGLEEAGLDRLIRAGYRLLDLITYFTVGPKEARAWTITRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y D+ GE G ++ GK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYADYAALGGEAGARDVGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|399991708|ref|YP_006571948.1| GTP-dependent nucleic acid-binding protein EngD [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398656263|gb|AFO90229.1| GTP-dependent nucleic acid-binding protein EngD [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 365
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/364 (51%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GAS+GEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAEVI+TEL+LSDL +EK +K ++ + + +LL L + P R
Sbjct: 121 DPVADAEVIETELMLSDLESIEKRRANLVRKLKGNDKEAQQQDRLLADAQAMLEEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ ++ E+ + K L LLT KP+++V NV E+ + N ++ A Q +II A
Sbjct: 181 LVEVDAEDAKAWKMLQLLTTKPVLYVCNVGESESVEGNEYSAKVAEMAAGQGNSHVIISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL +GL E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 QIEEEISQLEPEEAEMFLSEMGLAEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRTG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y+DF+ + GEQG K AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 TAAPQAAGVIHGDFEKGFIRAETIAYEDFIAHNGEQGAKEAGKMRAEGKGYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|400753347|ref|YP_006561715.1| GTP-dependent nucleic acid-binding protein EngD [Phaeobacter
gallaeciensis 2.10]
gi|398652500|gb|AFO86470.1| GTP-dependent nucleic acid-binding protein EngD [Phaeobacter
gallaeciensis 2.10]
Length = 403
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/364 (51%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK A N+PFCTIEPN+G + VPD RL L I
Sbjct: 39 MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAG 98
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GAS+GEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 99 SKQIIPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 158
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAEVI+TEL+LSDL +EK +K ++ + + +LL L + P R
Sbjct: 159 DPVADAEVIETELMLSDLESIEKRRANLVRKLKGNDKEAQQQDRLLADAQAMLEEGKPAR 218
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ ++ E+ + K L LLT KP+++V NV E+ + N ++ A Q +II A
Sbjct: 219 LVEVDAEDAKAWKMLQLLTTKPVLYVCNVGESESVEGNEYSAKVAEMAAGQGNSHVIISA 278
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL +GL E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 279 QIEEEISQLEPEEAEMFLSEMGLAEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRTG 338
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y+DF+ + GEQG K AGK+R+EGK Y+V+DGD+L+
Sbjct: 339 TAAPQAAGVIHGDFEKGFIRAETIAYEDFIAHNGEQGAKEAGKMRAEGKGYVVKDGDVLH 398
Query: 359 FLFN 362
FLFN
Sbjct: 399 FLFN 402
>gi|443631584|ref|ZP_21115765.1| GTPase with RNA binding site [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443349389|gb|ELS63445.1| GTPase with RNA binding site [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 366
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +VK
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFENEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|359782576|ref|ZP_09285796.1| GTP-binding protein YchF [Pseudomonas psychrotolerans L19]
gi|359369396|gb|EHK69967.1| GTP-binding protein YchF [Pseudomonas psychrotolerans L19]
Length = 366
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 260/366 (71%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ I+AEN+PFCTIEPN GI+ +PD RL L IVK
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTQSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ VDIAGLV+GASKGEGLGNKFLA+IRET+ + HV+RCF+D+ + H++ ++
Sbjct: 61 ERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVANSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR- 179
P D EVI ELI +DL EK + + + ++ ++ LL+++I + P R
Sbjct: 121 PKRDIEVIDLELIFADLDSCEKQLQRVTRNAKGGDKEALAQKALLEQLIPHFEAGKPARS 180
Query: 180 -LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ L+ E+ ++ +LLT KP++++ANV E+GF+NN LD ++ A + ++ +C
Sbjct: 181 LMKGLDEEQKRLVRSFHLLTSKPVMYIANVAEDGFENNPHLDVVRAIAEEEGAVVVPVCN 240
Query: 239 KLEEEISDLNNI-DKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L++ +K+ FL+++G++E LN +IRA + LL+L+TYFT G KE+RAWT+
Sbjct: 241 KIEAEIAELDDDEEKQMFLESMGMEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTVRV 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q+A IHTD ++GFIRA ++Y DF+ +KGE G K AGK R EGK Y+V+DGD++
Sbjct: 301 GATAPQSAAAIHTDFEKGFIRAEVVAYDDFIAFKGENGAKEAGKWRLEGKDYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|338971772|ref|ZP_08627154.1| GTP-binding and nucleic acid-binding protein YchF
[Bradyrhizobiaceae bacterium SG-6C]
gi|338235080|gb|EGP10188.1| GTP-binding and nucleic acid-binding protein YchF
[Bradyrhizobiaceae bacterium SG-6C]
Length = 365
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/364 (51%), Positives = 250/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L+ I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDKLSAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ S E L L++R + L P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDNLSKKAKGGDKDSKEQLDLVERALKLLRDGKPTR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKI-YAHNQNIPIIIICA 238
M +EE + + L LLT KP+++V NV+E+ Q +A + ++I A
Sbjct: 181 GMERKSEEERNFRMLGLLTSKPVLYVCNVEESSAATGNSFSQAVFDHAKKEGAVAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSREERVDFLDTLGLEEAGLDRLIRAGYELLHLITYFTVGPKEARAWTITKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y+D++ GE G ++AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYEDYVALNGEAGARDAGKLRLEGKEYIVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|83950130|ref|ZP_00958863.1| GTP-binding protein YchF [Roseovarius nubinhibens ISM]
gi|83838029|gb|EAP77325.1| GTP-binding protein YchF [Roseovarius nubinhibens ISM]
Length = 365
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/364 (48%), Positives = 254/364 (69%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARLDRLAEIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+++I P + VDIAGLV GA++GEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SRQIIPTRMTFVDIAGLVKGAAQGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL +EK + +K ++ +++ +LL+ L + P R
Sbjct: 121 DPVADAETIETELMLADLESIEKRLQNIIRKVRGGDKEAVQQQRLLEAAKAALEEGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANV-KENGFKNNLLLDQLKIYAHNQNIPIIIICA 238
++++++++ + K L LLT KP+++V NV +E N ++ A Q ++I A
Sbjct: 181 TVAVDDDDMRAWKMLQLLTTKPVLYVCNVSEEEAATGNAHSAKVAEMAAAQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L++ + FLD +GL E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 RIEEEISQLDDEEAAMFLDEMGLTEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIKTG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T+A +AAG+IH D ++GFIRA TI+Y DF+ GEQ K+AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 TSAPKAAGVIHGDFEKGFIRAETIAYDDFVSLGGEQPAKDAGKMRAEGKGYIVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|319787940|ref|YP_004147415.1| GTP-binding protein YchF [Pseudoxanthomonas suwonensis 11-1]
gi|317466452|gb|ADV28184.1| GTP-binding protein YchF [Pseudoxanthomonas suwonensis 11-1]
Length = 363
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 258/363 (71%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALTK I+A N+PFCTIEPN+G++ VPD RL L I+
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+K+ P ++ VDIAGLV+GA+ GEGLGNKFLAHIRE + + HV+RCF+ I H++G+++
Sbjct: 61 QKVVPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFEHGDIVHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL +EK +++ + ++ + +L ++ L + R
Sbjct: 121 PLSDIETIDTELALADLDSVEKALNRAERSAKGGDKEAQARKPVLLKLQAALGEGRSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ EE ++ L LLT+KP++++ANV E+GF NN LD ++ +A + ++ + A +
Sbjct: 181 AGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFDNNPHLDAVRAHAQAEGAEVVPVSAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
EEE+S L++ D+ FL +LGL E LN +IRA++ LL L+TYFT G KE+RAWT+ G T
Sbjct: 241 EEELSQLDDADRDTFLADLGLDEPGLNRVIRAAYKLLGLQTYFTAGVKEVRAWTVKAGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAA +IHTD ++GFIRA TI+Y DF+ Y+GE G + AG++R EGK+Y V++GDIL+F
Sbjct: 301 APQAAAVIHTDFEKGFIRAETIAYDDFIKYRGEAGAREAGRMRLEGKEYRVQEGDILHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|121602664|ref|YP_989280.1| translation-associated GTPase [Bartonella bacilliformis KC583]
gi|421761083|ref|ZP_16197888.1| GTP-binding protein YchF [Bartonella bacilliformis INS]
gi|120614841|gb|ABM45442.1| GTP-dependent nucleic acid-binding protein engD [Bartonella
bacilliformis KC583]
gi|411173493|gb|EKS43537.1| GTP-binding protein YchF [Bartonella bacilliformis INS]
Length = 367
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 251/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R+K + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMKKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCFK++ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFKNEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA +++TEL+LSDL LE+ I K K++ S+ +L +++ + L K P+R
Sbjct: 121 DPIFDATIVETELMLSDLESLERRIIPIRKTATGKDKESLTILPIMEAALTLLQKGSPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ L ++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKDLPSDEKRILNSLNLLTSKPVLYVCNVNENEAAHGNDFTQAVEKIAEEQNAQTIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L + + +L+ LGL E L+ LIRA + LLDL TYFT G KE RAWTI
Sbjct: 241 SASIESEIAQLTDEEATEYLNALGLSEPSLDRLIRAGYCLLDLITYFTCGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY+D++ GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYEDYITLGGENGAKEAGKARDEGKEYIVQDGDV 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|451344564|ref|ZP_21913620.1| GTP-binding protein YchF [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449336726|gb|EMD15898.1| GTP-binding protein YchF [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 366
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 247/366 (67%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T ++ A NYPF TI PN+G++EVPD RL L + +
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITNSQVEAANYPFATINPNVGVVEVPDHRLDDLRTLFQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK + DIAGLV GAS+GEGLGNKFLA+IRET+ + V+RCF+D ITH+ G ++
Sbjct: 61 KKTIYTTFEFTDIAGLVKGASRGEGLGNKFLANIRETDAICEVVRCFRDKDITHVDGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I EL+ +D+ +EK I K +K + + E +++L I L K +P R
Sbjct: 121 PIRDVETIHLELVFADIETVEKRISKLERKAKSGEKEAKEEMEVLTPIKETLEKGLPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
+S + EE + +K NLLT+KPII+VAN+ E + NN QL YAH +N ++ IC
Sbjct: 181 LSFSKEEWVYVKQYNLLTMKPIIYVANMGEEDIENPDNNPYYLQLVEYAHKENADVVPIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E E++ L DK F+D+LG+KE+ L+ LI+ ++ LL+L+T+FTVG E RAWT +
Sbjct: 241 AKIESELAGLGEDDKAIFMDDLGIKESGLDKLIKETYHLLNLKTFFTVGPDECRAWTFKD 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G TA Q AGIIHTD +RGFIRA T SY D ++YK E + AGKIR EGK Y +DGDI+
Sbjct: 301 GMTAPQMAGIIHTDFERGFIRAETYSYDDMMIYKSENALREAGKIRQEGKTYQGQDGDIM 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 FFKFNV 366
>gi|386760804|ref|YP_006234021.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus sp. JS]
gi|384934087|gb|AFI30765.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus sp. JS]
Length = 366
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVYEFEILSKLKEAFESEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|340029839|ref|ZP_08665902.1| GTP-binding protein YchF [Paracoccus sp. TRP]
Length = 365
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 247/364 (67%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M + G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFRMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDPRLDKLAEIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+DD +TH+ G +
Sbjct: 61 SKQIIPTRITFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDDDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+++DL +E+ + +K ++ ++ KLLK L P R
Sbjct: 121 DPLADADTIETELMIADLESVERRLANIQRKLKGGDKDAVAQEKLLKAAQAALESGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ + +E+ + L LLT KP++FV NV+E+ N D++ A Q ++I A
Sbjct: 181 TVQVADEDRKAWDMLQLLTAKPVLFVCNVEEDKAATGNSQSDRVAQMAAEQGAGHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + FL+ +GL E L+ LIR + LL L TYFT+G KE RAWTI G
Sbjct: 241 RIEEEISQLPAEEATMFLEEMGLHEAGLDRLIREGYKLLGLETYFTIGPKEARAWTIHKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A +AAG+IH D +RGFIRA TI+Y+D++ YKGE G + AGK+R EGK Y+V+DGD+L+
Sbjct: 301 TPAPRAAGVIHGDFERGFIRAETIAYEDYVTYKGEAGAREAGKLRVEGKSYVVQDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|39995770|ref|NP_951721.1| GTP-binding protein YchF [Geobacter sulfurreducens PCA]
gi|39982534|gb|AAR33994.1| GTP-dependent translational factor YchF, putative [Geobacter
sulfurreducens PCA]
Length = 364
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/364 (46%), Positives = 253/364 (69%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKST+FNALT + NYPFCTI+PN+GI++VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDVRLDRLAEIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P I+ VDIAGLV GAS+GEGLGN+FL HIR + ++HV+RCF+D+ + H+SG ++
Sbjct: 61 ERILPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFEDENVVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++IQTEL L+DL ++K + + K+ ++ E + R+ L + IP R
Sbjct: 121 PLRDIDIIQTELALADLDSVDKKLQRVEKQAKSGDKRLKEESEFYARLKAALEQGIPARH 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICAK 239
+ + +EEL ++ L+LLT KP+++VANV E+ + + +++ A + ++ IC +
Sbjct: 181 VQVADEELPWLRDLHLLTDKPVLYVANVAEDDLDGAHPAVAKVRELAEREGARVVTICGR 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI++L+ +K+ FL+ +GL E+ L+ LIR + LL L TYFT GKKE+RAWTIP GT
Sbjct: 241 IEAEIAELDGDEKRVFLEEMGLAESGLDRLIRMGYELLGLITYFTAGKKEVRAWTIPTGT 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++GFIRA I+Y D++ GE G K G +R EGK+Y+V+DGD+++F
Sbjct: 301 KAPQAAGVIHTDFEKGFIRAEVIAYADYIAAGGETGAKEKGLMRLEGKEYVVQDGDVMHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|296134463|ref|YP_003641710.1| GTP-binding protein YchF [Thermincola potens JR]
gi|296033041|gb|ADG83809.1| GTP-binding protein YchF [Thermincola potens JR]
Length = 364
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 250/364 (68%), Gaps = 3/364 (0%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
++ G++GLPNVGKSTLFNA+T+ A NYPFCTI+PN+G++EVPD RL L +V ++
Sbjct: 1 MQLGIVGLPNVGKSTLFNAITRAGAEAANYPFCTIDPNVGVVEVPDPRLDKLAEMVNPQR 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ P + + VDIAGLV GASKGEGLGNKFL+HIRE + ++HV+RCF+DD +TH+ G + P
Sbjct: 61 VVPTVTQFVDIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFRDDNVTHVEGSVGPT 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E I ELIL+D+ LE+ +D+ K ++ ++LL+RI L+ PIR +
Sbjct: 121 RDIETINMELILADMETLERRLDRSRKLLKTNDKKVAAEVELLERIHAALDAGKPIRGLG 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIICAK 239
LN EE IK N LT KP+++ ANV E K N ++++K A +N +I++CAK
Sbjct: 181 LNPEEAAIIKDANFLTAKPVLYAANVGEEDLPDGKGNPYVEEVKRIAAAENSEVIVVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI++L++ +K FL +LGL+E+ L+ LIRA + LL L T+FT G +E++AWTI GT
Sbjct: 241 IEAEIAELDDDEKAEFLADLGLEESGLDKLIRAGYRLLGLMTFFTAGPQEVKAWTIKQGT 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG IH+DI+RGFIRA +SY D + + + G +R EGK Y+++DGD++ F
Sbjct: 301 KAPQAAGKIHSDIERGFIRAEVVSYDDLMAAGSQLAAREKGLVRLEGKDYVMQDGDVVYF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|451942270|ref|YP_007462907.1| translation-associated GTPase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901657|gb|AGF76119.1| translation-associated GTPase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 367
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 252/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+DD ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREIDAIVHVLRCFQDDDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 EPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEALTILPMMEAALNLLQKGSPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKEISSDERRILDNLNLLTSKPVLYVCNVSENDAAHGNSFTKMVEKIATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L L L E LN LIRA +SLLDL TYFT G KE RAWTI
Sbjct: 241 SAAIEAEITQLNDAEASEYLHALELFEPSLNRLIRAGYSLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY+D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYEDYIALGGENGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|395779601|ref|ZP_10460070.1| GTP-binding protein YchF [Bartonella washoensis 085-0475]
gi|423712327|ref|ZP_17686629.1| GTP-binding protein YchF [Bartonella washoensis Sb944nv]
gi|395412201|gb|EJF78710.1| GTP-binding protein YchF [Bartonella washoensis Sb944nv]
gi|395419976|gb|EJF86261.1| GTP-binding protein YchF [Bartonella washoensis 085-0475]
Length = 367
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQDEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEAMTILPVMEAALNLLQKGSPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E + LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKDISSDERHILDSLNLLTSKPVLYVCNVSENDAAHGNSFTQMVEKMASEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L L L E LN LIRA + LLDL TYFT G KE RAWTI
Sbjct: 241 SAAIEAEITQLNDAEATEYLSALELFEPSLNRLIRAGYHLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY+D+++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYEDYIVLGGENGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|114704352|ref|ZP_01437260.1| hypothetical protein FP2506_05446 [Fulvimarina pelagi HTCC2506]
gi|114539137|gb|EAU42257.1| hypothetical protein FP2506_05446 [Fulvimarina pelagi HTCC2506]
Length = 367
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 254/368 (69%), Gaps = 6/368 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M +CG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD RLK++ I K
Sbjct: 1 MGFRCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPDSRLKNIAGIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ + P I VDIAGLV GASKGEGLGN+FLA+IRE + ++HV+RCF+D+ I H+ G+I
Sbjct: 61 SANVIPTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDEDIAHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE ++TEL+++DL LE+ + KK K++ ++ L ++++ + LN P+R
Sbjct: 121 DPVADAETVETELMIADLESLERRVVNTRKKATGKDKEALAQLPVMEKALEALNDGKPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN--GFKNNLLLDQLKIYAHNQNIPIII 235
+ L+ E+ +++ LNLLT KP+++V NV EN N+ D K+ A +Q ++
Sbjct: 181 TIVEDLDPEDRRTLRALNLLTSKPVLYVCNVAENDAATGNHHAADVAKM-AESQGAGAVV 239
Query: 236 ICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTI 295
I A +E EI+ L+ + FL+ +GL E L+ LIRA + LLDL TYFT G KE RAWT+
Sbjct: 240 ISAAIEAEIAQLDEAETSEFLETMGLTEPGLDRLIRAGYDLLDLITYFTAGPKETRAWTV 299
Query: 296 PNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGD 355
NG A QAAG+IHTD ++GFIRA TI+Y D++ GE K+AGK R EGK+Y+V DGD
Sbjct: 300 HNGAKAPQAAGVIHTDFEKGFIRAQTIAYDDYVTLGGEVPAKDAGKARDEGKEYVVADGD 359
Query: 356 ILNFLFNI 363
++ F FN+
Sbjct: 360 VMLFKFNV 367
>gi|416158158|ref|ZP_11605597.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 101P30B1]
gi|416217677|ref|ZP_11624410.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 7169]
gi|416225025|ref|ZP_11626765.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 103P14B1]
gi|416242593|ref|ZP_11633629.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC7]
gi|416254792|ref|ZP_11638894.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis O35E]
gi|326560426|gb|EGE10808.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 7169]
gi|326561630|gb|EGE11967.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 103P14B1]
gi|326571177|gb|EGE21201.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC7]
gi|326573468|gb|EGE23436.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 101P30B1]
gi|326577098|gb|EGE26992.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis O35E]
Length = 363
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 256/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G +N
Sbjct: 61 ERTIPTSMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + I NKK ++ + L + ++I L P RL
Sbjct: 121 PLSDIETINTELALADLEAVTRAITNLNKKAKGGDKDAQAALGVFQKIEPLLADGKPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E IK L+T+KP++++ANV E+GF NN LD ++ +A+N+N ++ +C ++
Sbjct: 181 ADLDADEKKLIKSYGLITLKPVMYIANVAEDGFDNNPHLDAVREFANNENAIVVALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ +K FL+ +G+ E L+ +IRA + LL+L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIAQLDEEEKAEFLEGMGMSEAGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA I Y DF+ Y GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFERGFIRAEVIGYDDFIEYGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|119505830|ref|ZP_01627896.1| translation-associated GTPase [marine gamma proteobacterium
HTCC2080]
gi|119458328|gb|EAW39437.1| translation-associated GTPase [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 265/364 (72%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M +KCG++GLPNVGKSTLFNALT+ I AEN+PFCTIEPN G++ +PD R + ++
Sbjct: 1 MGIKCGIVGLPNVGKSTLFNALTEAGIDAENFPFCTIEPNAGVVPIPDPRQHSIAALINP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ A ++ VDIAGLV+GASKGEGLGN+FLA+IRET+ + HV+RCF+DD + H++ +I+
Sbjct: 61 EREIAATMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDDNVIHVANKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLK-RIIFNLNKSIPIR 179
P D E+I TEL L+DL EK + K + ++ SI + +LL+ +++ LN++ PIR
Sbjct: 121 PTSDIEIINTELALADLESCEKQLTKVTRTAKGGDKESIAMKQLLEDKLLPQLNEAQPIR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAK 239
++L++ E + L+LLT KP +++ANV E+GF+NN LD ++ A + ++ IC K
Sbjct: 181 ALTLDDNEQALLSTLHLLTTKPTLYIANVAEDGFENNPHLDTVQSIAAAEGAEVVAICNK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI +L + +K+ FL +G++E LN +IRA + LL+L+TYFT G KE+RAWT+P G
Sbjct: 241 LESEIIELEDDEKQDFLAEMGMEEPGLNRVIRAGYKLLNLQTYFTAGPKEVRAWTVPIGA 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
TA Q AG+IHTD ++GFIRA I Y DF+ +KGEQG K+AG+ R EGK+Y++ DGD+++F
Sbjct: 301 TAPQGAGVIHTDFQKGFIRAEVIGYDDFIAHKGEQGAKDAGRWRLEGKEYILADGDVIHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|157694463|ref|YP_001488925.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus pumilus
SAFR-032]
gi|157683221|gb|ABV64365.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/366 (47%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELIL+DL +EK + + +K K++ ++ +L +++ R
Sbjct: 121 PVSDIETINLELILADLETVEKRLARVSKLAKQKDKEAVAEFDILSKLMHAFEAGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KP+++VANV E+ + N + Q++ +A +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPVLYVANVSEDEVADHDGNEYVQQIREFASGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG+KE+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIKESGLDQLIQASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGSMSAAKEAGKVRLEGKEYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|395765975|ref|ZP_10446565.1| GTP-binding protein YchF [Bartonella sp. DB5-6]
gi|395410710|gb|EJF77262.1| GTP-binding protein YchF [Bartonella sp. DB5-6]
Length = 367
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAS 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQDEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA ++TEL+L+DL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPISDATTVETELMLADLESLERRILQIRKRATGKDKEALTILPVMEIALDLLQKGSPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E ++ LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKDISSDEHHILESLNLLTSKPVLYVCNVSENDAAHGNSFTQMVETMAKEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L+ L L E LN LIRA ++LLDL TYFT G KE RAWTI
Sbjct: 241 SASIEAEITQLNDAEASEYLNALELCEPSLNRLIRAGYNLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYDDYIALGGENGAKEAGKARDEGKEYVVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|194016267|ref|ZP_03054881.1| GTP-binding protein YchF [Bacillus pumilus ATCC 7061]
gi|194011740|gb|EDW21308.1| GTP-binding protein YchF [Bacillus pumilus ATCC 7061]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/366 (47%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELIL+DL +EK + + +K K++ ++ +L +++ R
Sbjct: 121 PVSDIETINLELILADLETVEKRLARVSKLAKQKDKEAVAEFDILSKLMNAFEAGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ +E+ +K L+LLT KP+++VANV E+ + N + Q++ +A ++N +I++C
Sbjct: 181 VEFTDEQQKLVKQLHLLTSKPVLYVANVSEDEVADHDGNEYVQQIREFASSENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG+KE+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIKESGLDQLIQASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGSMSAAKEAGKVRLEGKEYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|416235656|ref|ZP_11630256.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 12P80B1]
gi|416246682|ref|ZP_11635140.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC8]
gi|421779876|ref|ZP_16216366.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis RH4]
gi|326564031|gb|EGE14275.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 12P80B1]
gi|326570494|gb|EGE20534.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis BC8]
gi|407812670|gb|EKF83454.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis RH4]
Length = 363
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 257/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G++N
Sbjct: 61 ERTIPTSMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGQVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + I NKK ++ + L + ++I L P RL
Sbjct: 121 PLSDIETINTELALADLEAVTRAITNLNKKAKGGDKDAQAALGVFQKIEPLLADGKPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E IK L+T+KP++++ANV E+GF NN LD ++ +A+N++ ++ +C ++
Sbjct: 181 ADLDADEKKLIKSYGLITLKPVMYIANVAEDGFDNNPHLDAVREFANNEDAIVVALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ +K FL+ +G+ E L+ +IRA + LL+L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIAQLDEEEKAEFLEGMGMSEAGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA I Y DF+ Y GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFERGFIRAEVIGYDDFIEYGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|387928253|ref|ZP_10130931.1| GTP-binding protein YchF [Bacillus methanolicus PB1]
gi|387587839|gb|EIJ80161.1| GTP-binding protein YchF [Bacillus methanolicus PB1]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/369 (49%), Positives = 250/369 (67%), Gaps = 9/369 (2%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ A NYPFCTI+PN+GI+EVPD RL L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAEAANYPFCTIDPNVGIVEVPDHRLTKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIRE + + V+RCF DD ITH+SG+++
Sbjct: 61 KKTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHS---IELLKLLKRIIFNLNKSIP 177
P+ D E I ELIL+DL +EK I + K K++ + E+L +LK F K P
Sbjct: 121 PVADIETINLELILADLESVEKRIGRVEKMAKQKDKDASFEFEVLSMLKE-AFESEK--P 177
Query: 178 IRLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPII 234
R + ++E++ +K L+LLTIKP+++VANV E + N + Q+K YA N +I
Sbjct: 178 ARAVEFSDEQMKVVKGLHLLTIKPVLYVANVGEEDVADPSSNEYVQQVKEYAEKDNSEVI 237
Query: 235 IICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWT 294
++CAK+E EI++L+ +K FL LG++E+ L+ LIR ++SLL L TYFT G +E+RAWT
Sbjct: 238 VVCAKIESEIAELDGEEKAMFLQELGIEESGLDQLIRKAYSLLGLATYFTAGVQEVRAWT 297
Query: 295 IPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDG 354
G A Q AGIIH+D +RGFIRA T+SY D L + AGK+R EGK Y V+DG
Sbjct: 298 FRKGMKAPQCAGIIHSDFERGFIRAETVSYDDLLAAGSMAAAREAGKVRLEGKDYEVQDG 357
Query: 355 DILNFLFNI 363
DI++F FN+
Sbjct: 358 DIIHFRFNV 366
>gi|452974083|gb|EME73905.1| GTP-binding protein YchF [Bacillus sonorensis L12]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 252/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+RCF DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I + K K++ ++ ++L ++ + P R
Sbjct: 121 PISDIETINLELILADLETVEKRIGRVGKMAKQKDKEAVFEFEILTKLKEAFEQEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KP+++VANV E+ + N + +++ +A +N +I++C
Sbjct: 181 VEFTEEQHKVLKQLHLLTTKPVLYVANVSEDEVADPSGNEYVQKVREFAAAENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKAMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIHTD +RGFIRA T++Y D L K AGK+R EGK Y+V+DGD++
Sbjct: 301 GMKAPQCAGIIHTDFERGFIRAETVAYDDLLEAGSMSAAKEAGKVRLEGKDYIVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|16081144|ref|NP_391972.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
subsp. subtilis str. 168]
gi|221312074|ref|ZP_03593921.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221316399|ref|ZP_03598204.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221321312|ref|ZP_03602606.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221325595|ref|ZP_03606889.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321313652|ref|YP_004205939.1| GTP-binding protein YchF [Bacillus subtilis BSn5]
gi|384177748|ref|YP_005559133.1| hypothetical protein I33_4261 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|428281772|ref|YP_005563507.1| translation-associated GTPase [Bacillus subtilis subsp. natto
BEST195]
gi|452912444|ref|ZP_21961072.1| 50S ribosome-binding GTPase family protein [Bacillus subtilis
MB73/2]
gi|586848|sp|P37518.1|ENGD_BACSU RecName: Full=GTP-dependent nucleic acid-binding protein EngD
gi|467376|dbj|BAA05222.1| unknown [Bacillus subtilis]
gi|2636639|emb|CAB16129.1| putative GTPase with RNA binding site [Bacillus subtilis subsp.
subtilis str. 168]
gi|291486729|dbj|BAI87804.1| translation-associated GTPase [Bacillus subtilis subsp. natto
BEST195]
gi|320019926|gb|ADV94912.1| GTP-binding protein YchF [Bacillus subtilis BSn5]
gi|349596972|gb|AEP93159.1| hypothetical protein I33_4261 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|407962946|dbj|BAM56186.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
BEST7613]
gi|407966958|dbj|BAM60197.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
BEST7003]
gi|452117472|gb|EME07866.1| 50S ribosome-binding GTPase family protein [Bacillus subtilis
MB73/2]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|418030664|ref|ZP_12669149.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351471723|gb|EHA31836.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 376
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 11 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 70
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 71 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 130
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 131 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARS 190
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 191 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 250
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 251 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 310
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 311 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVI 370
Query: 358 NFLFNI 363
+F FN+
Sbjct: 371 HFRFNV 376
>gi|319898489|ref|YP_004158582.1| GTP-binding protein [Bartonella clarridgeiae 73]
gi|319402453|emb|CBI75994.1| GTP-binding protein [Bartonella clarridgeiae 73]
Length = 367
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 250/366 (68%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R+K + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDLRMKKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDENITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA ++TEL+LSDL LE+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPISDATTVETELMLSDLESLERRITQIRKRATAKDKEALAILPIMEAGLKLLQKGYPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
LM ++ +E + LNLLT KP+++V NV EN N ++ A QN I+I
Sbjct: 181 LMLKDISADEQYILNSLNLLTSKPVLYVCNVSENEAAHGNDFTQAVEKMATAQNAHTIVI 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L + +L+ LGL E LN LIRA + LLDL TYFT G KE RAWTI
Sbjct: 241 AASIEAEIAQLTEEEALEYLNALGLSEPGLNRLIRAGYDLLDLITYFTCGPKETRAWTIV 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
G A QAAG+IH+D +RGFIRA TISY+D++ GE K AGK+R EGK+Y+V+DGDI
Sbjct: 301 RGVKAPQAAGVIHSDFERGFIRAQTISYEDYIALGGENAAKEAGKVRDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 ILFKHN 366
>gi|402820619|ref|ZP_10870186.1| hypothetical protein IMCC14465_14200 [alpha proteobacterium
IMCC14465]
gi|402511362|gb|EJW21624.1| hypothetical protein IMCC14465_14200 [alpha proteobacterium
IMCC14465]
Length = 365
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 249/365 (68%), Gaps = 2/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVSVPDTRLDALAGIAA 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I PA + VDIAGLV GASKGEGLGN+FL +IRE + + HV+RCF+D ITH+ GEI
Sbjct: 61 SKEIIPARLSFVDIAGLVRGASKGEGLGNQFLGNIREVDAIAHVLRCFEDSNITHVEGEI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE ++TEL+L+DL LEK KK K++ SIE L+L+ + L + P R
Sbjct: 121 DPLADAETVETELMLADLESLEKRESNLRKKATTKDKKSIEELELVDLALAELREGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
++ + K L LLT KP+++V NV+E+ N L ++ A + ++I A
Sbjct: 181 VVDVPKGRERDFKNLQLLTSKPVLYVCNVEEDSAASGNSLSAKVAERAATEGAETVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEE++ L+ ++ + +LGL+E LN LI +SLLDL TYFT G KE RAWT+ G
Sbjct: 241 RIEEELAQLDAAERLEYQQSLGLEEPGLNRLIEQGYSLLDLITYFTCGPKETRAWTVRRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
+TA QAAGIIHTD +RGFIRA T +Y D++ +GE G + GK+R EGK+Y+V+DGD++
Sbjct: 301 STAPQAAGIIHTDFERGFIRAETTAYDDYVACQGESGARETGKLRQEGKEYIVQDGDVML 360
Query: 359 FLFNI 363
F FN+
Sbjct: 361 FKFNV 365
>gi|117924131|ref|YP_864748.1| GTP-binding protein YchF [Magnetococcus marinus MC-1]
gi|117607887|gb|ABK43342.1| GTP-binding protein YchF [Magnetococcus marinus MC-1]
Length = 369
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/369 (46%), Positives = 254/369 (68%), Gaps = 6/369 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L+CG++GLPNVGKST FNALT + NYPFCTIEPN+G++ VPD RL L+ IV
Sbjct: 1 MALQCGIVGLPNVGKSTTFNALTAAGAESANYPFCTIEPNVGVVVVPDPRLDALSAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+++ P ++ +DIAGLV+GASKGEGLGN+FL HIR+ + ++H++RCF+DD ITH++ I+
Sbjct: 61 QRVLPTTMEFLDIAGLVAGASKGEGLGNQFLGHIRQVDAIVHLVRCFEDDDITHVANSID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E+I TELIL+D+A EK + KK ++ S L+++I N P+R
Sbjct: 121 PLRDIEIIDTELILADMASAEKRYNSVVKKAKSGDKESKIQADALEKVIAGFNAGKPMRN 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKEN------GFKNNLLLDQLKIYAHNQNIPII 234
+ L+ EE ++ L LT KP++++ NV E+ ++ L+DQ++ +A + ++
Sbjct: 181 LDLSKEEQATLAELFFLTNKPVLYLCNVSESLVAAAQTPGSHALVDQVREHAKGEGAEVV 240
Query: 235 IICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWT 294
+C +E EI++L +K FL++LGL E+ L+ LI+A++ LL L+TYFT G KE+RAWT
Sbjct: 241 AVCGSIEAEIAELEGDEKAAFLEDLGLHESGLDRLIQAAYRLLGLQTYFTAGVKEVRAWT 300
Query: 295 IPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDG 354
+ G TA +AAG+IHTD ++GFIRA SY DF+ KGE G K GK+R EGK+Y V DG
Sbjct: 301 VKQGATAPEAAGVIHTDFQKGFIRAEVTSYDDFIACKGEAGAKEKGKLRLEGKEYRVADG 360
Query: 355 DILNFLFNI 363
D+++F FN+
Sbjct: 361 DVMHFRFNV 369
>gi|409911214|ref|YP_006889679.1| GTP-dependent translational factor YchF [Geobacter sulfurreducens
KN400]
gi|298504780|gb|ADI83503.1| GTP-dependent translational factor YchF, putative [Geobacter
sulfurreducens KN400]
Length = 364
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/364 (46%), Positives = 252/364 (69%), Gaps = 1/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKST+FNALT + NYPFCTI+PN+GI++VPD RL L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDVRLDRLAEIVSP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++I P I+ VDIAGLV GAS+GEGLGN+FL HIR + ++HV+RCF+D+ + H+SG ++
Sbjct: 61 ERILPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFEDENVVHVSGSVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D ++IQTEL L+DL ++K + + K+ ++ E + R+ L + IP R
Sbjct: 121 PLRDIDIIQTELALADLDSVDKKLQRVEKQAKSGDKRLKEESEFYARLKAALEQGIPARH 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN-NLLLDQLKIYAHNQNIPIIIICAK 239
+ + +EEL ++ L+LLT KP+++VANV E+ + + +++ A + ++ IC +
Sbjct: 181 VQVADEELPWLRDLHLLTDKPVLYVANVAEDDLDGAHPAVAKVRELAEREGARVVTICGR 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
+E EI++L +K+ FL+ +GL E+ L+ LIR + LL L TYFT GKKE+RAWTIP GT
Sbjct: 241 IEAEIAELEGDEKRVFLEEMGLAESGLDRLIRMGYELLGLITYFTAGKKEVRAWTIPTGT 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG+IHTD ++GFIRA I+Y D++ GE G K G +R EGK+Y+V+DGD+++F
Sbjct: 301 KAPQAAGVIHTDFEKGFIRAEVIAYADYIAAGGETGAKEKGLMRLEGKEYVVQDGDVMHF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|375310997|ref|ZP_09776258.1| gtpase translation factor [Paenibacillus sp. Aloe-11]
gi|375076975|gb|EHS55222.1| gtpase translation factor [Paenibacillus sp. Aloe-11]
Length = 366
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+I+
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ ++K I++ K N+ + +++L+RI +L P R
Sbjct: 121 PISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYAQEVEVLERIKESLYADKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L++E+ + ++ L+LLT+KP+++ ANV E+G +N + +++ +A +N ++ I
Sbjct: 181 VELSDEDRLIVRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVREFAVAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVESEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A AAG+IH+D +RGFIRA +SY D + G K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPGAAGVIHSDFERGFIRAEVVSYDDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|402778262|ref|YP_006632206.1| GTPase with RNA binding site [Bacillus subtilis QB928]
gi|402483441|gb|AFQ59950.1| Putative GTPase with RNA binding site [Bacillus subtilis QB928]
Length = 395
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 30 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 89
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 90 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 149
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 150 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARS 209
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 210 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 269
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 270 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 329
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 330 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVI 389
Query: 358 NFLFNI 363
+F FN+
Sbjct: 390 HFRFNV 395
>gi|146328826|ref|YP_001210191.1| GTP-binding protein [Dichelobacter nodosus VCS1703A]
gi|146232296|gb|ABQ13274.1| GTP-binding protein [Dichelobacter nodosus VCS1703A]
Length = 363
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 253/363 (69%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALT+ + A+NYPFCTI+PN GI+ VPD RL+ L NIV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTQAGVDAQNYPFCTIDPNTGIVHVPDPRLQALANIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+I PA ++ VDIAGLV+GAS+GEGLGN+FLAHIRET+ + V+RCF+D + H++G +N
Sbjct: 61 ARIVPATMEFVDIAGLVAGASRGEGLGNQFLAHIRETDAIAQVVRCFEDHDVIHVAGAVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI+D +VI++ELILSD+ LEK + + ++ + L ++KR+ +L R
Sbjct: 121 PINDIQVIESELILSDMMSLEKAEQRFTRIAKSGDKDAKLKLDIIKRLQAHLEAGQLART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
+ L EE +++K L LLT+KP+++VANV E+ +N L ++ A + ++ ICA +
Sbjct: 181 LPLTAEERLAVKELFLLTMKPMMYVANVDEDCAPDNPHLVAVQEKAAETDAVVVTICAAI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E E++ L ++ L GL E LN +I+A + LLDL TYFT G +E+RAWT+P T
Sbjct: 241 EAELAQLEPDEQLELLAEYGLAEPGLNRVIQAGYRLLDLGTYFTAGVQEVRAWTMPKCAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A QAAG+IH+D +RGFIRA I+Y+DF+ + GEQG K AGK R EGK Y V++GD+++F
Sbjct: 301 APQAAGVIHSDFERGFIRAEVIAYEDFITFGGEQGAKEAGKWRLEGKDYHVQEGDVIHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|52082637|ref|YP_081428.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319648503|ref|ZP_08002719.1| GTP-dependent nucleic acid-binding protein engD [Bacillus sp.
BT1B_CT2]
gi|404491517|ref|YP_006715623.1| GTP-binding protein YchF [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680372|ref|ZP_17655211.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
licheniformis WX-02]
gi|52005848|gb|AAU25790.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52350538|gb|AAU43172.1| GTP-dependent nucleic acid-binding protein YyaF [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317389582|gb|EFV70393.1| GTP-dependent nucleic acid-binding protein engD [Bacillus sp.
BT1B_CT2]
gi|383441478|gb|EID49187.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus
licheniformis WX-02]
Length = 366
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+RCF DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL +EK I + K K++ ++ ++L ++ + P R
Sbjct: 121 PISDIETINLELILADLETVEKRIGRVGKMAKQKDKEAVFEFEILTKLKEAFEQEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ + E+ +K L+LLT KP+++VANV E+ + N + +++ +A +N +I++C
Sbjct: 181 VEFSEEQQKVLKQLHLLTTKPVLYVANVSEDEVADPSGNEYVQKVREFAAAENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKAMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y D L K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYDDLLEAGSMTAAKEAGKVRLEGKEYIVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|414168419|ref|ZP_11424478.1| GTP-binding protein YchF [Afipia clevelandensis ATCC 49720]
gi|410887691|gb|EKS35498.1| GTP-binding protein YchF [Afipia clevelandensis ATCC 49720]
Length = 365
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/364 (51%), Positives = 250/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L+ I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDKLSAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ S E L L++R + L P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDNLSKKAKGGDKDSKEQLDLVERALKLLRDGKPTR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
M EE + + L LLT KP+++V NV+E + N + +A + ++I A
Sbjct: 181 GMERKPEEERNFRMLGLLTSKPVLYVCNVEEGSAATGNSFSQAVFDHAKKEGAVAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSREERVDFLDTLGLEEAGLDRLIRAGYELLHLITYFTVGPKEARAWTITKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y+D++ GE G ++AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYEDYVALNGEAGARDAGKLRLEGKEYIVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|163867938|ref|YP_001609142.1| GTP-dependent nucleic acid-binding protein EngD [Bartonella
tribocorum CIP 105476]
gi|161017589|emb|CAK01147.1| GTP-binding protein [Bartonella tribocorum CIP 105476]
Length = 367
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 257/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+++ ITH+ G I
Sbjct: 61 SKEIIPTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQNEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L ++++ + L + P+R
Sbjct: 121 DPVCDATTVETELMLADLESLERRIVQIRKRATGKDKEALTILPVMEKALNILQQGNPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E +K LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLNDISSDEHCVLKNLNLLTSKPVLYVCNVSENDAAHGNSFTQTVEKMAIEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L++ + +LD LGL E LN LIRA + LL+L TYFT G KE RAWTIP
Sbjct: 241 SASIEAEITQLSDAEASEYLDALGLFEPSLNRLIRAGYHLLNLITYFTCGPKETRAWTIP 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
+GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 HGTKAPQAAGVIHSDFERGFIRAQTISYDDYIALGGESGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 ILFKHN 366
>gi|86136049|ref|ZP_01054628.1| GTP-binding protein YchF [Roseobacter sp. MED193]
gi|85826923|gb|EAQ47119.1| GTP-binding protein YchF [Roseobacter sp. MED193]
Length = 365
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 251/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDSRLDKLAAIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL +EK +K ++ + + +LL + L + P R
Sbjct: 121 DPVADAETIETELMLADLESIEKRRANLVRKLKGNDKEAQQQERLLAQAQAMLEEGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ +++E+ + K L LL+ KP+++V NV E+ + N ++ A Q ++I A
Sbjct: 181 LVEVDDEDAKAWKVLQLLSTKPVLYVCNVGESESAEGNAHSAKVAEMAAAQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL+ +GL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 QIEEEISQLEAEEAQMFLEEMGLEEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIRQG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T+ QAAG+IH D ++GFIRA TI+Y+DF+ GEQG K AGK+R+EGK Y+V+DGD+++
Sbjct: 301 TSGPQAAGVIHGDFEKGFIRAETIAYEDFIACNGEQGAKEAGKMRAEGKSYIVKDGDVMH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|395781882|ref|ZP_10462292.1| GTP-binding protein YchF [Bartonella rattimassiliensis 15908]
gi|395420324|gb|EJF86605.1| GTP-binding protein YchF [Bartonella rattimassiliensis 15908]
Length = 367
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 257/366 (70%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+++ ITH+ G I
Sbjct: 61 SKEIIPTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQNEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA +++TEL+L+DL LE+ I + K+ K++ ++ + ++++++ L + PIR
Sbjct: 121 DPISDATMVETELMLADLESLERRIVQIRKRAIGKDKEALTIRPVMEKVLNILQQGSPIR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E +K LNLLT KP++++ NV EN N L ++ A QN III
Sbjct: 181 LLLKDISSDEYHILKSLNLLTSKPVLYICNVSENDAAHGNSLTQTVEKMATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L++ + +L+ LGL E LN LIRA + LL+L TYFT G KE RAWTI
Sbjct: 241 SASIEAEITQLSDTEASEYLNALGLFEPSLNRLIRAGYHLLNLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYNDYIALGGESGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|390457272|ref|ZP_10242800.1| GTP-binding protein YchF [Paenibacillus peoriae KCTC 3763]
Length = 366
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 257/366 (70%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+I+
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ ++K I++ K N+ + +++L+RI +L P R
Sbjct: 121 PISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYAQEVEVLERIKESLYADKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L++E+ + ++ L+LLT+KP+++ ANV E+G +N + +++ +A +N ++ I
Sbjct: 181 VELSDEDRVIVRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVREFAVAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVESEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A AAG+IH+D +RGFIRA +SY D + G K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPGAAGVIHSDFERGFIRAEVVSYDDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|398309087|ref|ZP_10512561.1| GTP-binding protein YchF [Bacillus mojavensis RO-H-1]
Length = 366
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ +L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFDILSKLKEAFENEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNEYVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGDEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKDYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|224475512|ref|YP_002633118.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420119|emb|CAL26933.1| putative GTP-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 365
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/365 (49%), Positives = 253/365 (69%), Gaps = 2/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL+ L++IV
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLQALSDIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK+ P + DIAG+V GASKGEGLGNKFL+HIRE + + V+R F DD +TH+SG ++
Sbjct: 61 KKVIPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVSGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D EVI EL+L+DL ++K + + K K++ ++ +++L+RI L P+R
Sbjct: 121 PLDDIEVINMELVLADLESVDKRLPRLEKMARQKDKDAVNEVRILERIKEALEAGDPVRS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF--KNNLLLDQLKIYAHNQNIPIIIICA 238
+ N E+ +K LLT KP+I++ANV E+ +N + +K YA + +I+I A
Sbjct: 181 LEFNEEDAKYVKQAQLLTSKPMIYIANVGEDEINEADNEKVTTIKEYADKEGSEVIVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+EEEI+ L+ DK+ FL++LG+ E L+ LIR+++ LL L TYFT G +E+RAWT G
Sbjct: 241 KIEEEIATLDEEDKEMFLEDLGITEPGLDRLIRSTYDLLGLATYFTAGVQEVRAWTFRKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
TA Q AGIIHTD +RGFIRA S+KD++ GE G K AGK+R EGK Y+++DGD+++
Sbjct: 301 MTAPQCAGIIHTDFERGFIRAEVTSFKDYVENNGEHGAKEAGKMRLEGKDYIMQDGDVVH 360
Query: 359 FLFNI 363
F FN+
Sbjct: 361 FRFNV 365
>gi|254460396|ref|ZP_05073812.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2083]
gi|206676985|gb|EDZ41472.1| GTP-binding protein YchF [Rhodobacteraceae bacterium HTCC2083]
Length = 384
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/364 (50%), Positives = 252/364 (69%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK + A N+PFCTIEPN+G + VPD RL L +I
Sbjct: 20 MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDTLADIAG 79
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 80 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 139
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NP+ DAE I+TEL+L+DL +EK +K ++ +I+ +LL+ L P R
Sbjct: 140 NPVEDAETIETELMLADLESVEKRRQGLTRKTRGGDKEAIQQDRLLEAAQNALEDGKPAR 199
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ ++L + K L LLT KP+++V NV E+ N + + A Q +II A
Sbjct: 200 TVDVDEDDLRAWKLLQLLTSKPVLYVCNVGESESATGNAHSEAVAAMAAAQGNSHVIISA 259
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L+ + + FL+ +GL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 260 QIEEEISQLDAEEAQMFLEEMGLEEAGLDRLIRAGYDLLHLETYFTVGPKEARAWTIREG 319
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T+A +AAG+IH D ++GFIRA TI+Y D++ + GEQG K AGK+R+EGK Y V+DGD+L+
Sbjct: 320 TSAPKAAGVIHGDFEKGFIRAETIAYDDYIEHNGEQGSKEAGKMRAEGKGYTVKDGDVLH 379
Query: 359 FLFN 362
FLFN
Sbjct: 380 FLFN 383
>gi|169830188|ref|YP_001700346.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
sphaericus C3-41]
gi|168994676|gb|ACA42216.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
sphaericus C3-41]
Length = 366
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 249/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFLAHIRE + + V+RCF D+ ITH+SG ++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL ++K I + +K K++ ++ +L +I L P R
Sbjct: 121 PIDDIEVINLELALADLESVDKRIQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
L+++EL IK L+LLTIKP+++VANV E+ NN + +++ YA + +I IC
Sbjct: 181 AELSDDELKVIKGLHLLTIKPMLYVANVSEDEVADADNNEYVQKVREYASAEGAQVITIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEIS+L++ +K FL+ LG+KE+ L+ LIR S+ LL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEISELDDEEKAMFLEELGIKESGLDQLIRTSYDLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIHTD +RGFIRA T++Y D L + K AGK+R EGK+Y V+DGDI+
Sbjct: 301 GMKAPQCAGIIHTDFERGFIRAETVAYDDLLEAGSQAAAKEAGKVRLEGKEYEVQDGDIM 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 LFRFNV 366
>gi|389574628|ref|ZP_10164688.1| GTP-binding protein YchF [Bacillus sp. M 2-6]
gi|388425750|gb|EIL83575.1| GTP-binding protein YchF [Bacillus sp. M 2-6]
Length = 366
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVQP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELIL+DL +EK + + +K K++ ++ +L+++ R
Sbjct: 121 PVSDIETINLELILADLETVEKRLTRVSKLAKQKDKEAVAEFDILEKLKDAFEAGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ +E+ +K L+LLT KPI++VANV E+ + N + Q++ +A +N +I++C
Sbjct: 181 VEFTDEQQKLVKQLHLLTSKPILYVANVSEDEVADQDGNEYVQQIREFASGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG+KE+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIKESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGSMSAAKEAGKVRLEGKEYIVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|395788362|ref|ZP_10467926.1| GTP-binding protein YchF [Bartonella birtlesii LL-WM9]
gi|395408279|gb|EJF74890.1| GTP-binding protein YchF [Bartonella birtlesii LL-WM9]
Length = 367
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRIEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+D+ ITH+ G I
Sbjct: 61 SKEIIPTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA ++TEL+L+DL +E+ I + K+ K++ ++ +L +++ + L K P+R
Sbjct: 121 DPISDAITVETELMLADLESVERRIVQIRKRVIGKDKEALTILPIMEAALNLLQKGNPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E +++ LNLLT KP++++ NV EN N L +K A QN III
Sbjct: 181 LLLKDISSDERRTLENLNLLTSKPVLYICNVNENDAAHGNSLTQTVKKMATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ LN+ + +L L L E LN LIRA +SLLDL TYFT G KE RAWTI
Sbjct: 241 SASIEAEITQLNDAEALEYLHALELFEPSLNRLIRAGYSLLDLITYFTCGPKETRAWTII 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY+D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYEDYIALGGENGAKEAGKARDEGKEYVVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|347819484|ref|ZP_08872918.1| GTP-binding protein YchF, partial [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 327
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/327 (52%), Positives = 240/327 (73%), Gaps = 1/327 (0%)
Query: 38 EPNIGIIEVPDKRLKHLNNIVKTKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRET 97
EPN+G++E+PD RL + IV ++I PAI++ VDIAGLV+GAS+GEGLGN+FLAHIRET
Sbjct: 1 EPNVGVVELPDPRLAQIAQIVAPERIVPAIVEFVDIAGLVAGASQGEGLGNQFLAHIRET 60
Query: 98 NIVIHVIRCFKDDKITHISGEINPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNE- 156
+ +++V+RCF+D+ + H++G ++PI D EVIQTEL L+DL +EK +++ K N+
Sbjct: 61 DAIVNVVRCFEDENVIHVAGRVDPISDIEVIQTELCLADLGTVEKALNRHTKAAKSGNDK 120
Query: 157 HSIELLKLLKRIIFNLNKSIPIRLMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNN 216
+ +L+ LL RI L++ P R + +E +K L L+T KP +FV NV E+GF NN
Sbjct: 121 DAAKLVALLTRIRAALDEGQPARSVDTTRQEQALLKPLCLITAKPAMFVGNVGEDGFGNN 180
Query: 217 LLLDQLKIYAHNQNIPIIIICAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSL 276
LLD+L+ YA QN P++ ICAK+E E++++N D+ FL +G E L+ LIRA+F L
Sbjct: 181 PLLDRLEEYAARQNAPVVAICAKMEAEMAEMNAADRALFLAEMGQSEPGLDRLIRAAFRL 240
Query: 277 LDLRTYFTVGKKEIRAWTIPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGC 336
L L+TYFT G KE+RAWTI G TA QAAG+IH D +RGFIRA TI++ DF+ GEQG
Sbjct: 241 LGLQTYFTAGVKEVRAWTIHTGDTAPQAAGVIHGDFERGFIRAQTIAFDDFIACAGEQGA 300
Query: 337 KNAGKIRSEGKKYLVEDGDILNFLFNI 363
++AGK+R+EG+ YLV+DGD+LNFLFN+
Sbjct: 301 RDAGKMRAEGRDYLVKDGDVLNFLFNV 327
>gi|239828697|ref|YP_002951321.1| GTP-dependent nucleic acid-binding protein EngD [Geobacillus sp.
WCH70]
gi|239808990|gb|ACS26055.1| GTP-binding protein YchF [Geobacillus sp. WCH70]
Length = 366
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 252/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK + NYPFCTIEPN+GI+EVPD+RLK L + K
Sbjct: 1 MGLTAGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKVLTEMFKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P + + DIAG+V GASKGEGLGNKFL+HIR+ + + V+RCF D+ ITH++G ++
Sbjct: 61 QRTVPTVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFTDENITHVAGRVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELI +DL ++K ID+ K K++ ++ +L R+ P R
Sbjct: 121 PLADIETINLELIFADLETVDKRIDRVGKIAKQKDKDAVFEYDILVRLKETFEAGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S EE+ +K L+LLTIKP+++VANV E N N + Q++ +A + N +I++C
Sbjct: 181 LSFTEEEMKVVKQLHLLTIKPMLYVANVGEEDVANPDANPFVKQVREFAKSDNAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEI+ L++ +K+ FL LG++++ L+ LIRAS++LL L T+FT G++E+RAWT
Sbjct: 241 AKIEEEIAQLDDEEKELFLQELGIQQSGLDQLIRASYNLLGLATFFTAGEQEVRAWTFRR 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T+SY+D + + AGKIR EGK Y V+DGDI+
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVSYEDLITAGSMAAAREAGKIRLEGKDYEVQDGDII 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 YFRFNV 366
>gi|449096553|ref|YP_007429044.1| GTP-dependent nucleic acid-binding protein [Bacillus subtilis XF-1]
gi|449030468|gb|AGE65707.1| GTP-dependent nucleic acid-binding protein [Bacillus subtilis XF-1]
Length = 376
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 11 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 70
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 71 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 130
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 131 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKDAVFEFEILSKLKEAFESEKPARS 190
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 191 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 250
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 251 AKIESEIAELEGEEKQMFLEELGIQESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 310
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK+Y+V+DGD++
Sbjct: 311 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVKDGDVI 370
Query: 358 NFLFNI 363
+F FN+
Sbjct: 371 HFRFNV 376
>gi|110681032|ref|YP_684039.1| GTP-dependent nucleic acid-binding protein EngD [Roseobacter
denitrificans OCh 114]
gi|109457148|gb|ABG33353.1| GTP-binding protein YchF [Roseobacter denitrificans OCh 114]
Length = 365
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L +I K
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLADIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDSIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL +EK + +K ++ +++ +L++ L P R
Sbjct: 121 DPVADAETIETELMLADLESIEKRLQNIVRKVRGGDKEAVQQQRLMEAAKAALEDGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
++ ++ E+ + L LLT KP++FV NV E N ++ A Q ++I A
Sbjct: 181 VVEVDAEDRKAWNMLQLLTSKPVLFVCNVGEAEAATGNAHSAKVAEMAAAQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FLD +GL E L+ LI+A ++LL L TYFTVG KE RAWTIP G
Sbjct: 241 QIEEEISQLEPEEAEMFLDEMGLSEAGLDRLIQAGYALLHLETYFTVGPKEARAWTIPQG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
TTA +AAG+IH D ++GFIRA TI+Y DF+ GE K AGK+R+EGK Y+V+DGD+L+
Sbjct: 301 TTAPKAAGVIHGDFEKGFIRAETIAYDDFVSLGGESAAKEAGKMRAEGKAYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|416229446|ref|ZP_11628043.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 46P47B1]
gi|326562593|gb|EGE12904.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella
catarrhalis 46P47B1]
Length = 363
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 256/363 (70%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M CG++GLPNVGKSTLFNALTK I+AEN+PFCT +PN GI+ VPD RLK L IV
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ P ++ VDIAGLV+GASKGEG+GN+FLA+IRET+ + HV+RCF DD + H+ G +N
Sbjct: 61 ERTIPTSMEFVDIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I TEL L+DL + + I NKK ++ + L + ++I L P RL
Sbjct: 121 PLSDIETINTELALADLEAVTRAITNLNKKAKGGDKDAQAALGVFQKIEPLLADGKPARL 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKNNLLLDQLKIYAHNQNIPIIIICAKL 240
L+ +E IK L+T+KP++++ANV E+GF NN LD ++ +A+N++ ++ +C ++
Sbjct: 181 ADLDADEKKLIKSYGLITLKPVMYIANVAEDGFDNNPHLDAVREFANNEDAIVVALCNQI 240
Query: 241 EEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGTT 300
E EI+ L+ +K FL+ +G+ E L+ +IRA + LL+L+TYFT G KE+RAWT+P G T
Sbjct: 241 EAEIAQLDEEEKAEFLEGMGMSEAGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVPVGAT 300
Query: 301 AEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNFL 360
A +AAG+IHTD +RGFIRA I Y DF+ Y GE+G AGK R EGK Y+V+DGD+++F
Sbjct: 301 APEAAGVIHTDFERGFIRAEVIGYDDFIEYGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR 360
Query: 361 FNI 363
FN+
Sbjct: 361 FNV 363
>gi|402300574|ref|ZP_10820062.1| GTP-binding protein YchF [Bacillus alcalophilus ATCC 27647]
gi|401724299|gb|EJS97674.1| GTP-binding protein YchF [Bacillus alcalophilus ATCC 27647]
Length = 366
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/367 (49%), Positives = 254/367 (69%), Gaps = 5/367 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTTGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVDP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+RCF DD ITH+SG +N
Sbjct: 61 KKTVPTAFEFTDIAGIVEGASKGEGLGNKFLSHIRQVDAISHVVRCFSDDNITHVSGSVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI ELIL+DL +EK I + K K++ ++ L++L+ + P R
Sbjct: 121 PIRDIEVINLELILADLESIEKRITRVGKLAKTKDKEAVAELEVLEILQKTFEDEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKEN---GFKNNLLLDQLKIYAHNQNIPIIIIC 237
+ + E+ +K L+LLT KP+++VANV E G +N + +K +A +N +I++C
Sbjct: 181 IEFSEEQQKIVKQLHLLTSKPVLYVANVSEEDLLGDGDNDYVKLVKEFAAAENSEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L+ +K+ FL+ LG++E+ L+ LIRA++ LL L TYFT G +E+RAWT
Sbjct: 241 AKIESEIAELDGEEKQMFLEELGIEESGLDQLIRAAYQLLGLETYFTAGVQEVRAWTYRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQG-CKNAGKIRSEGKKYLVEDGDI 356
GT A QAAGIIHTD +RGFIRA +SY D L+ G G K GK+R EGK Y+V+DGD+
Sbjct: 301 GTKAPQAAGIIHTDFERGFIRAEIVSYDD-LMEAGSMGQAKENGKVRLEGKDYVVQDGDV 359
Query: 357 LNFLFNI 363
++F FN+
Sbjct: 360 IHFRFNV 366
>gi|39937414|ref|NP_949690.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas
palustris CGA009]
gi|192293197|ref|YP_001993802.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas
palustris TIE-1]
gi|39651273|emb|CAE29795.1| putative GTP-binding protein [Rhodopseudomonas palustris CGA009]
gi|192286946|gb|ACF03327.1| GTP-binding protein YchF [Rhodopseudomonas palustris TIE-1]
Length = 365
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/364 (50%), Positives = 246/364 (67%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L + K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAEVGK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+++I P + VDIAGLV GASKGEGLGN+FLA IRE + + HV+RCF+D ITH+ G +
Sbjct: 61 SQQIIPTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFEDGDITHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+LSDL LEK +D KK ++ S E L+L+ R + L P R
Sbjct: 121 APLADIETIETELMLSDLESLEKRVDNLTKKAKGGDKDSKEQLELVTRALTLLRDGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ EE + + L LLT KP+++V NV+E + + N +Q+ A + ++I A
Sbjct: 181 FLERKPEEERAFRMLGLLTSKPVLYVCNVEEGSAAEGNKFSEQVMARAKEEGAVAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSKEERTDFLDTLGLHEAGLDRLIRAGYELLHLITYFTVGPKEARAWTITKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAA +IHTD ++GFIRA TI+Y D++ GE G ++ GK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPQAAAVIHTDFEKGFIRAETIAYDDYIRLGGEAGARDGGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|47568674|ref|ZP_00239371.1| GTP-binding protein YchF [Bacillus cereus G9241]
gi|47554662|gb|EAL13016.1| GTP-binding protein YchF [Bacillus cereus G9241]
Length = 366
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 255/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL L +V+
Sbjct: 1 MGLTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + + DIAG+V GASKGEGLGNKFL+HIR+ + + V+RCF+D+ ITH+SGE++
Sbjct: 61 KKTVPTVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGEVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL ++K I++ K K++ ++ ++L R+ + P R
Sbjct: 121 PIDDIETINLELILADLESVDKRIERVAKLARQKDKEAVYEHEILVRLKEAFEEGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ E++ +K L+LLT K +++VANV E+ N + +K +A N+N +I++C
Sbjct: 181 VEFTEEQMKIVKGLHLLTTKEMLYVANVSEDDVIDPSENKYVQMVKEFAANENSQVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L+ +KK FL+ LG++E+ L+ LIRA++ LL L TYFT G +E+RAWT
Sbjct: 241 AKIESEIAELDEEEKKVFLEELGIEESGLDQLIRAAYDLLGLATYFTAGVQEVRAWTFKQ 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AG+IHTD +RGFIRA T+SY+D + K AGK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPQCAGVIHTDFERGFIRAETVSYEDLMTNGSMTAAKEAGKVRLEGKEYIVKDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|414175241|ref|ZP_11429645.1| GTP-binding protein YchF [Afipia broomeae ATCC 49717]
gi|410889070|gb|EKS36873.1| GTP-binding protein YchF [Afipia broomeae ATCC 49717]
Length = 365
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 248/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L+ I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDKLSAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+++I P + VDIAGLV GASKGEGLGN+FLA IRE + V HV+RCF+D ITH+ G+I
Sbjct: 61 SQQIIPTQLTFVDIAGLVKGASKGEGLGNQFLATIREVDAVAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D +KK ++ + E L+L++R + L P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDSLSKKAKGNDKDAKEQLELVERALKLLRDGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK-NNLLLDQLKIYAHNQNIPIIIICA 238
+ EE + + L LLT KP+++V NV+E N Q+ +A + + I A
Sbjct: 181 FLERKAEEERAFRMLGLLTSKPVLYVCNVEEGAAATGNSFSQQVFEHAKKEGAVAVAISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ L+ ++ FLD LGL+E L+ LIRA + LL L TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATLSREERVDFLDTLGLEEAGLDRLIRAGYELLHLITYFTVGPKEARAWTITKG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y D++ GE G ++ GK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPAAAGVIHTDFEKGFIRAETIAYDDYIANGGEAGARDTGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|254470562|ref|ZP_05083966.1| GTP-binding protein YchF [Pseudovibrio sp. JE062]
gi|211960873|gb|EEA96069.1| GTP-binding protein YchF [Pseudovibrio sp. JE062]
Length = 366
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 252/365 (69%), Gaps = 3/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M +CG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R + I +
Sbjct: 1 MGFQCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPDPRQSKIAAIAQ 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF++D ITH+ G+I
Sbjct: 61 SKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFENDDITHVDGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DAE ++TEL++SD+ LEK I KK ++ + L ++++ + L P+R
Sbjct: 121 DPIADAETVETELMVSDMESLEKRIAPLEKKAKSGDKDAKAALPIMEQALAILQDGKPVR 180
Query: 180 LMSLNN-EELMSIKFLNLLTIKPIIFVANVKENGF-KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L + EE+ +K LNLLT KP+++V NV+E K N L +++ A Q ++I
Sbjct: 181 ALGLTDPEEIKQLKMLNLLTSKPVLYVCNVEEEAADKGNSLSAKVQAMAEEQGAASVVIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A +E EI+ L + +++ ++ ++GL+E L+ LIRA + LL+L TYFT G KE RAWTI
Sbjct: 241 AAIEAEIAQLEDEEQREYMADMGLEEPGLDRLIRAGYGLLELITYFTAGPKETRAWTIVA 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IHTD +RGFIRA TI+Y D++ GE K AGK R EGK+Y+V+DGD+L
Sbjct: 301 GTKAPQAAGVIHTDFERGFIRAQTIAYNDYVELGGETPAKEAGKARDEGKEYIVQDGDVL 360
Query: 358 NFLFN 362
F FN
Sbjct: 361 LFKFN 365
>gi|348025290|ref|YP_004765094.1| GTP-binding protein YchF [Megasphaera elsdenii DSM 20460]
gi|341821343|emb|CCC72267.1| GTP-binding protein YchF [Megasphaera elsdenii DSM 20460]
Length = 368
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/365 (50%), Positives = 253/365 (69%), Gaps = 3/365 (0%)
Query: 2 NLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTK 61
NL+ G++GLPNVGKSTLFNA+TK A NYPFCTIEPN+G++EVPDKR++ L ++ K K
Sbjct: 4 NLEVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDKRIQVLTDMYKPK 63
Query: 62 KIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINP 121
K PA+++ VDIAGLV+GASKGEGLGNKFL+HIRET+ + V+RCF+D ITH+ G I+P
Sbjct: 64 KTIPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDSNITHVDGSIDP 123
Query: 122 IHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLM 181
I D E I TEL L+DL +K D+ K ++ + +LK+++ L P R
Sbjct: 124 IRDIETINTELCLADLESAQKRADRIAKVAQCGDKDAKVEYAVLKKVLACLENGDPARKA 183
Query: 182 SLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIICA 238
L +EL +K LNLLT+KPII++ANV E+ N N + +++ YA + ++ + A
Sbjct: 184 GLTKDELPQVKELNLLTLKPIIYIANVAEDEAGNPDANPNVKRVEEYAAKEGAQVVAVSA 243
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI++L + + + FL+ LGL E+ L+ LI+AS+SLL L +FT G E+RAWTI NG
Sbjct: 244 KIEAEIAELPDDEAEVFLEELGLPESGLDKLIKASYSLLGLINFFTAGSDEVRAWTIVNG 303
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A++AAG IHTDI+RGFIRA +SY D + EQ K G +R EGK Y+++DGD+
Sbjct: 304 TKAQKAAGKIHTDIERGFIRAEIVSYDDLIACGSEQTAKEKGLVRLEGKDYVMQDGDVTY 363
Query: 359 FLFNI 363
F FN+
Sbjct: 364 FRFNV 368
>gi|310644401|ref|YP_003949160.1| GTPase translation factor [Paenibacillus polymyxa SC2]
gi|309249352|gb|ADO58919.1| GTPase probable translation factor-like protein [Paenibacillus
polymyxa SC2]
gi|392305083|emb|CCI71446.1| GTP-dependent nucleic acid-binding protein engD [Paenibacillus
polymyxa M1]
Length = 366
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 256/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+I+
Sbjct: 61 NKTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKID 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D + I ELIL+D+ ++K I++ K N+ + +++L+RI +L P R
Sbjct: 121 PISDIQTINLELILADIESVDKRIERSRKNMKGGNKQYAQEVEVLERIKESLYADKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGF---KNNLLLDQLKIYAHNQNIPIIIIC 237
+ L+ +E + I+ L+LLT+KP+++ ANV E+G +N + +++ +A +N ++ I
Sbjct: 181 VELSEDEKLIIRDLHLLTMKPVLYAANVSEDGVTEADSNPYVQKVREFAVAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKAMFLEELGLAESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIHK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A AAG+IH+D +RGFIRA +SY D + G K G++R EGK+Y+V+DGD++
Sbjct: 301 GTKAPGAAGVIHSDFERGFIRAEVVSYDDLVAAGSMNGAKERGQLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|402814116|ref|ZP_10863710.1| GTP-dependent nucleic acid-binding protein EngD [Paenibacillus
alvei DSM 29]
gi|402507963|gb|EJW18484.1| GTP-dependent nucleic acid-binding protein EngD [Paenibacillus
alvei DSM 29]
Length = 366
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M LK G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+G++EVPD+RL L +V
Sbjct: 1 MALKAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLVKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
+ P + VDIAGLV GASKGEGLGNKFLAHIRE + ++HV+RCF+D+ ITH+ G+++
Sbjct: 61 NRTVPTAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I EL+L+DL +EK +D+ K ++ +L+R+ L P R
Sbjct: 121 PVSDIQTINLELVLADLESVEKRLDRTKKNMKSGDKKYAAEAAVLERLKEALYDDKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L++EE + ++ ++LLT+KP+++ ANV E+G K+ N + Q++ +A +N ++ I
Sbjct: 181 LELSDEEKVLVRDMHLLTMKPVLYAANVSEDGVKDADSNPYVQQVRDFAAAENAEVVPIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L DK+ FL+ LGL E+ LN LI+A++ LL L TYFT G +E+RAWTI
Sbjct: 241 AKVEAEIAELEGEDKEMFLEELGLDESGLNRLIKAAYRLLGLYTYFTAGVQEVRAWTIRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A QAAG+IH+D +RGFIRA +SY D + K GK+R EGK+Y+V+DGD++
Sbjct: 301 GMKAPQAAGVIHSDFERGFIRAEVVSYDDLVAGGSMNAVKEQGKLRLEGKEYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|114769267|ref|ZP_01446893.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2255]
gi|114550184|gb|EAU53065.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2255]
Length = 365
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 249/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++G+PNVGKSTLFNALT+ + A N+PFCTIEPN G + VPD+RL L+ I
Sbjct: 1 MGFKTGIVGMPNVGKSTLFNALTRTAAAQAANFPFCTIEPNTGEVSVPDERLDLLSQIAS 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K I PA + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF DD +TH+ G +
Sbjct: 61 SKTIIPARMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFDDDDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
NPI DAE I+TEL+L+DL +EK + +K ++ ++ LL R L +P R
Sbjct: 121 NPIEDAETIETELMLADLENIEKRMQGLVRKIKGGDKDAVMQNDLLSRAKEALEAGMPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
++++E K L LLT KP+++V NV+E N K N D + A +Q ++I A
Sbjct: 181 TCVIDSDEEKQWKQLTLLTAKPVLYVCNVEEDNAGKGNTHSDAVAKMAADQGAASVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
+EEEIS L++ + + FL+ LGLKE L+ LI A + LL L+TYFTVG KE RAWTI
Sbjct: 241 AIEEEISQLDSDEAEMFLNELGLKEAGLDRLIAAGYELLGLQTYFTVGPKEARAWTIRKN 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T+A QAAG+IH D +RGFIRA TI++ D++ GEQG K GK+R+EGK Y+V +GD+L+
Sbjct: 301 TSAPQAAGVIHGDFERGFIRAETIAFNDYVECNGEQGAKEKGKMRAEGKTYIVSEGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|427430894|ref|ZP_18920608.1| GTP-binding and nucleic acid-binding protein YchF [Caenispirillum
salinarum AK4]
gi|425878385|gb|EKV27102.1| GTP-binding and nucleic acid-binding protein YchF [Caenispirillum
salinarum AK4]
Length = 369
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/369 (49%), Positives = 260/369 (70%), Gaps = 6/369 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M CG++GLPNVGKSTLFNALT + A N+PFCTIEPN+G + VPD+RL L I K
Sbjct: 1 MGFNCGIVGLPNVGKSTLFNALTSTAAAQAANFPFCTIEPNVGRVAVPDERLDKLAEIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K++ P ++ VDIAGLV GASKGEGLGN+FLA+IRET+ V+ V+RCF+D+ ITH+ G I
Sbjct: 61 SKQVIPTQLEFVDIAGLVRGASKGEGLGNQFLANIRETDAVVQVLRCFEDENITHVDGSI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL LE+ I KK + + E + +++ I+ L P R
Sbjct: 121 DPLRDAETIETELMLADLDSLERRIQPLLKKAKSGEKEAKEWVAVMEPILDGLRDGRPAR 180
Query: 180 LMSLNNEELMSIKF---LNLLTIKPIIFVANV-KENGFKNNLLLDQLKIYAHNQNIPIII 235
L +++E+ ++K L LLT KPI++V NV +E+ + N L ++ A Q ++
Sbjct: 181 LFRPDDKEMDALKIFRQLQLLTAKPILYVCNVDEESAAEGNTLSAKVAEMAKAQGAASVV 240
Query: 236 ICAKLEEEISDLNNI-DKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWT 294
I A +E E++ L + +K+ FL ++GL+ET L+ +IRA F LL+L ++FTVG KE RAWT
Sbjct: 241 ISAAIEAEVAQLEDAEEKQAFLADMGLEETGLSRVIRAGFDLLNLISFFTVGPKEARAWT 300
Query: 295 IPNGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDG 354
+ G+ A QAAG IHTD +RGFIRA TI+Y DF+ GE G K AGK+R+EGK+Y+V+DG
Sbjct: 301 VRKGSRAPQAAGEIHTDFERGFIRAETIAYDDFVACNGEVGAKEAGKMRAEGKEYVVQDG 360
Query: 355 DILNFLFNI 363
D+++FLFN+
Sbjct: 361 DVMHFLFNV 369
>gi|126651980|ref|ZP_01724172.1| translation-associated GTPase [Bacillus sp. B14905]
gi|126591249|gb|EAZ85358.1| translation-associated GTPase [Bacillus sp. B14905]
Length = 366
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 249/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFLAHIRE + + V+RCF D+ ITH+SG ++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL ++K I + +K K++ ++ +L +I L P R
Sbjct: 121 PIDDIEVINLELALADLESVDKRIQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
L+++EL IK L+LLTIKP+++VANV E+ NN + +++ YA + +I IC
Sbjct: 181 AELSDDELKVIKGLHLLTIKPMLYVANVSEDEVADADNNEYVKKVREYASAEGAQVITIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEIS+L++ +K FL+ LG+KE+ L+ LIR S+ LL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEISELDDEEKAMFLEELGIKESGLDQLIRTSYDLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIHTD +RGFIRA T++Y D L + K AGK+R EGK+Y V+DGDI+
Sbjct: 301 GMKAPQCAGIIHTDFERGFIRAETVAYDDLLEAGSQAAAKEAGKVRLEGKEYEVQDGDIM 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 LFRFNV 366
>gi|406667880|ref|ZP_11075631.1| GTP-dependent nucleic acid-binding protein engD [Bacillus
isronensis B3W22]
gi|405384287|gb|EKB43735.1| GTP-dependent nucleic acid-binding protein engD [Bacillus
isronensis B3W22]
Length = 366
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 251/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TIEPN+G + VPD+RL L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIEPNVGSVTVPDERLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GAS GEGLGNKFLAHIRE + + V+RCF+D+ ITH+SG +N
Sbjct: 61 KKTVPTTFEFTDIAGIVKGASTGEGLGNKFLAHIREVDAICQVVRCFEDENITHVSGTVN 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI ELIL+D+ ++K I + K K++ ++ +L+++ L P R
Sbjct: 121 PIDDIEVINLELILADMESVDKRIARVAKMAKQKDKEAMVEEPILQKLKDVLEAEKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
L+++E IK L+LLTIKP+++VANV E+ + N + ++ YA + +I +C
Sbjct: 181 ADLSDDEKKVIKGLHLLTIKPMLYVANVSEDEVADPSENKYVKMVQEYAAAEGAQVITVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEIS+L + +KK FL LG+ E+ L+ LI+AS+SLL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEISELEDDEKKEFLAELGIAESGLDQLIKASYSLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIHTD +RGFIRA T++Y D + Y + K AG++R+EGK+Y+V+DGD+L
Sbjct: 301 GMKAPQCAGIIHTDFERGFIRAETVAYTDLVEYGSKPAAKEAGRVRAEGKEYVVQDGDVL 360
Query: 358 NFLFNI 363
FLFN+
Sbjct: 361 EFLFNV 366
>gi|336237207|ref|YP_004589823.1| GTP-binding protein YchF [Geobacillus thermoglucosidasius C56-YS93]
gi|423721701|ref|ZP_17695883.1| GTP-binding protein (GTPase) [Geobacillus thermoglucosidans
TNO-09.020]
gi|335364062|gb|AEH49742.1| GTP-binding protein YchF [Geobacillus thermoglucosidasius C56-YS93]
gi|383365504|gb|EID42800.1| GTP-binding protein (GTPase) [Geobacillus thermoglucosidans
TNO-09.020]
Length = 366
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 251/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK + NYPFCTIEPN+GI+EVPD+RLK L +
Sbjct: 1 MGLTAGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKVLTEMFNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
K+ P + + DIAG+V GASKGEGLGNKFL+HIR+ + + V+RCF D+ ITH++G+++
Sbjct: 61 KRTVPTVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFTDENITHVAGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELI +DL ++K ID+ K K++ ++ +L R+ P R
Sbjct: 121 PLADIETINLELIFADLETVDKRIDRVGKIAKQKDKDAMLEYDILMRLKETFEAGKPART 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+S EE+ +K L+LLTIKP+++VANV E N N + Q++ +A + N +I++C
Sbjct: 181 LSFTEEEMKVVKQLHLLTIKPMLYVANVGEEDVANPDANPFVQQVREFAQSDNAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEI+ L + +K+ FL LG++++ L+ LIRAS++LL L T+FT G++E+RAWT
Sbjct: 241 AKIEEEIAQLEDEEKELFLQELGIEQSGLDQLIRASYNLLGLATFFTAGEQEVRAWTFRR 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T+SY+D + + AGKIR EGK Y V+DGDI+
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVSYEDLVAAGSMAAAREAGKIRLEGKDYEVQDGDII 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 YFRFNV 366
>gi|374332780|ref|YP_005082964.1| translation-associated GTPase [Pseudovibrio sp. FO-BEG1]
gi|359345568|gb|AEV38942.1| translation-associated GTPase [Pseudovibrio sp. FO-BEG1]
Length = 366
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 253/365 (69%), Gaps = 3/365 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M +CG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R + I +
Sbjct: 1 MGFQCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPDPRQSKIAAIAQ 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF++D ITH+ G+I
Sbjct: 61 SKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFENDDITHVDGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DAE ++TEL++SD+ LEK I KK ++ + L ++++ + L P+R
Sbjct: 121 DPIADAETVETELMVSDMESLEKRIAPLEKKAKSGDKDAKAALPIMEQALAILQDGKPVR 180
Query: 180 LMSLNN-EELMSIKFLNLLTIKPIIFVANV-KENGFKNNLLLDQLKIYAHNQNIPIIIIC 237
+ L + EE+ +K LNLLT KP+++V NV +E+ K N L +++ A Q ++I
Sbjct: 181 ALGLTDPEEIKQLKMLNLLTSKPVLYVCNVEEESADKGNSLSAKVQAMAEEQGAASVVIS 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A +E EI+ L + +++ ++ ++GL+E L+ LIRA + LL+L TYFT G KE RAWTI
Sbjct: 241 AAIEAEIAQLEDEEQREYMADMGLEEPGLDRLIRAGYGLLELITYFTAGPKETRAWTIVA 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IHTD +RGFIRA TI+Y D++ GE K AGK R EGK+Y+V+DGD+L
Sbjct: 301 GTKAPQAAGVIHTDFERGFIRAQTIAYNDYVELGGETPAKEAGKARDEGKEYIVQDGDVL 360
Query: 358 NFLFN 362
F FN
Sbjct: 361 LFKFN 365
>gi|305676745|ref|YP_003868417.1| GTPase with RNA binding site [Bacillus subtilis subsp. spizizenii
str. W23]
gi|305414989|gb|ADM40108.1| putative GTPase with RNA binding site [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 366
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFQFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFEILSKLKEAFESEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGDEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKDYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|407979899|ref|ZP_11160703.1| GTP-binding protein YchF [Bacillus sp. HYC-10]
gi|407413392|gb|EKF35102.1| GTP-binding protein YchF [Bacillus sp. HYC-10]
Length = 366
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD+RL+ L +V+
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVRP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D E I ELIL+DL +EK + + +K K++ ++ ++L ++ R
Sbjct: 121 PVSDIETINLELILADLETVEKRLTRVSKLAKQKDKEAVAEFEILTKLKDAFEAGKSARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ +E+ +K L+LLT KPI++VANV E+ + N + Q++ +A +N +I++C
Sbjct: 181 VEFTDEQQKLVKQLHLLTSKPILYVANVSEDEVADQDGNEYVQQIREFASGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG+KE+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGEEKQMFLEELGIKESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIHTD +RGFIRA T++Y+D L K AGK+R EGK+Y V+DGD++
Sbjct: 301 GMKAPECAGIIHTDFERGFIRAETVAYEDLLAGGSMSAAKEAGKVRLEGKEYEVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|338810724|ref|ZP_08622964.1| GTP-binding protein YchF [Acetonema longum DSM 6540]
gi|337277305|gb|EGO65702.1| GTP-binding protein YchF [Acetonema longum DSM 6540]
Length = 364
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/364 (49%), Positives = 252/364 (69%), Gaps = 3/364 (0%)
Query: 3 LKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKTKK 62
++ G++GLPNVGKSTLFNA+TK A NYPFCTIEPN+G++EVPD+RL L + K KK
Sbjct: 1 MEIGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDERLDKLAGMFKPKK 60
Query: 63 IFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEINPI 122
+ P ++ VDIAGLV GAS+GEGLGNKFL+HIR+ + + V+RCF+D+ ITH+ G ++P+
Sbjct: 61 VTPTAMRFVDIAGLVKGASQGEGLGNKFLSHIRQVDAIAQVVRCFQDENITHVEGGLDPL 120
Query: 123 HDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRLMS 182
D E+I TEL L+D+ +EK +DK K+ ++ + ++LL R+ L + P+R +
Sbjct: 121 RDIEIINTELCLADIDSVEKRLDKAQKQTKSGDKKAQAEVELLNRVRKMLEDAQPVRRVE 180
Query: 183 LNNEELMSIKFLNLLTIKPIIFVANVKEN---GFKNNLLLDQLKIYAHNQNIPIIIICAK 239
N EE +K LNLLT KP++FVANV E G +N L+ ++K YA + +I +CAK
Sbjct: 181 FNEEEQFILKELNLLTQKPVLFVANVSEEEIAGPDDNPLVQRVKQYAAREKAGVITVCAK 240
Query: 240 LEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNGT 299
LE EI++L + + K FL +LGL E+ L+ LI+A F LL L T+ T G+ E+RAWTI GT
Sbjct: 241 LESEIAELPDDEAKAFLTDLGLTESGLDKLIKAGFYLLGLMTFLTAGEPEVRAWTIVKGT 300
Query: 300 TAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILNF 359
A QAAG IH+DI+RGFIRA +SY D + + K G +R EGK Y+++DGD++ F
Sbjct: 301 KAPQAAGKIHSDIERGFIRAEIVSYDDLMRSGSQAAAKEKGLVRLEGKDYVMQDGDVVYF 360
Query: 360 LFNI 363
FN+
Sbjct: 361 RFNV 364
>gi|240850143|ref|YP_002971536.1| translation-associated GTPase [Bartonella grahamii as4aup]
gi|240267266|gb|ACS50854.1| translation-associated GTPase [Bartonella grahamii as4aup]
Length = 367
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + ++HV+RCF+++ ITH+ G I
Sbjct: 61 SKEIIPTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQNEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA ++TEL+L+DL LE+ I + K+ K++ ++ +L ++++ + L + P+R
Sbjct: 121 DPVSDATTVETELMLADLESLERRIVQIRKRATGKDKEALTILPIMEKALNILQQGNPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ ++++E +K LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKDISSDEHHILKSLNLLTSKPVLYVCNVSENDAAHGNSFTQTVEKMATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L++ + +L+ LGL E LN LIRA + LLDL TYFT G KE RAWTI
Sbjct: 241 SASIEAEITQLSDAEASEYLNALGLFEPSLNRLIRAGYHLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGD+
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYNDYIALGGESGAKEAGKARDEGKEYIVQDGDV 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
>gi|336115636|ref|YP_004570403.1| GTP-binding protein YchF [Bacillus coagulans 2-6]
gi|335369066|gb|AEH55017.1| GTP-binding protein YchF [Bacillus coagulans 2-6]
Length = 366
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/366 (46%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK + NYPFCTI+PN+G++EVPD+RL+ L +
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGMVEVPDERLEKLTELYHP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+RCF+D+ ITH+SG+++
Sbjct: 61 KKTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFEDENITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+DL ++K I + K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADLETVDKRIGRVEKIAKQKDKEAVAEYEVLAKLKAAFEAEKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ L ++ +K LLT KP+++VANV E+ ++ N + +++ YA + +I+IC
Sbjct: 181 VELTEDQQKIVKGFQLLTSKPVLYVANVGEDDIQDPSANPYVGKVREYAKQEGAEVIVIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
A++EEEI++L++ +KK FL LG++E+ L+ LI+A++SLL L TYFT G+ E+RAWT
Sbjct: 241 ARIEEEIAELDDDEKKMFLTELGIRESGLDQLIKAAYSLLGLATYFTAGEPEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIH+D ++GFIRA T+SY+D + Y + AGK+R EGK Y+V+DGD++
Sbjct: 301 GMKAPQCAGIIHSDFEKGFIRAETVSYEDLIEYGSVAAAREAGKVRLEGKDYVVQDGDVM 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|299541780|ref|ZP_07052103.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
fusiformis ZC1]
gi|424740061|ref|ZP_18168471.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
fusiformis ZB2]
gi|298725518|gb|EFI66159.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
fusiformis ZC1]
gi|422946284|gb|EKU40697.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus
fusiformis ZB2]
Length = 366
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 250/366 (68%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+TK A NYPF TI+PN+GI+EVPD RL L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFLAHIRE + + V+RCF D+ ITH+SG ++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D EVI EL L+DL ++K + + +K K++ ++ +L +I L P R
Sbjct: 121 PIDDIEVINLELALADLESVDKRLQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPARA 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFK---NNLLLDQLKIYAHNQNIPIIIIC 237
L+++EL IK L+LLTIKP+++VANV E+ NN + +++ YA ++ +I IC
Sbjct: 181 AELSDDELKVIKGLHLLTIKPMLYVANVSEDEVADADNNEYVKKVREYASAESAQVITIC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+EEEIS+L++ +K FL+ LG+KE+ L+ LIR S+ LL L TYFT G +E+RAWT
Sbjct: 241 AKIEEEISELDDEEKAMFLEELGIKESGLDQLIRTSYDLLGLATYFTAGVQEVRAWTFRK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A Q AGIIHTD +RGFIRA T++Y D L + K AGK+R EGK+Y V+DGDI+
Sbjct: 301 GMKAPQCAGIIHTDFERGFIRAETVAYDDLLEAGSQAAAKEAGKVRLEGKEYEVQDGDIM 360
Query: 358 NFLFNI 363
F FN+
Sbjct: 361 LFRFNV 366
>gi|126739649|ref|ZP_01755341.1| translation-associated GTPase [Roseobacter sp. SK209-2-6]
gi|126719295|gb|EBA16005.1| translation-associated GTPase [Roseobacter sp. SK209-2-6]
Length = 365
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 248/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTK-LKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALTK A N+PFCTIEPN+G + VPD+RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDERLDKLAAIAS 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DAE I+TEL+L+DL +EK +K ++ + + +LL L P R
Sbjct: 121 DPVADAETIETELMLADLESIEKRRANLVRKLKGNDKEAQQQDRLLAEAQAMLEDGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ ++ E+ + K L LL+ KP+++V NV E + N ++ A Q ++I A
Sbjct: 181 LVEVDAEDAKAWKMLQLLSTKPVLYVCNVGEAEAAEGNDFSAKVAEMAAAQGNSHVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL+ +GL+E L+ LIRA + LL L TYFTVG KE RAWTI +G
Sbjct: 241 QIEEEISQLEAEEAQMFLEEMGLEEAGLDRLIRAGYELLHLETYFTVGPKEARAWTIKSG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A QAAG+IH D ++GFIRA TI+Y D++ GEQG K AGK+R+EGK Y+V+DGD+++
Sbjct: 301 TAAPQAAGVIHGDFEKGFIRAETIAYDDYIASNGEQGAKEAGKMRAEGKSYIVKDGDVMH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|296330021|ref|ZP_06872505.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|296153060|gb|EFG93925.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis
subsp. spizizenii ATCC 6633]
Length = 366
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M L G++GLPNVGKSTLFNA+T+ + NYPFCTI+PN+GI+EVPD RL+ L +V
Sbjct: 1 MALTAGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
KK P + DIAG+V GASKGEGLGNKFL+HIR+ + + HV+R F DD ITH+SG+++
Sbjct: 61 KKTVPTAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVD 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
PI D E I ELIL+D+ +EK I + +K K++ ++ ++L ++ P R
Sbjct: 121 PIDDIETINLELILADMETVEKRITRVSKLAKQKDKEAVFEFEILSKLKEAFESEKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKENGFKN---NLLLDQLKIYAHNQNIPIIIIC 237
+ E+ +K L+LLT KPI++VANV E+ + N + +++ YA +N +I++C
Sbjct: 181 VEFTEEQQKLVKQLHLLTSKPILYVANVSEDEVADPSGNENVAKIREYAAGENAEVIVVC 240
Query: 238 AKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
AK+E EI++L +K+ FL+ LG++E+ L+ LI+AS+SLL L TYFT G++E+RAWT
Sbjct: 241 AKIESEIAELEGDEKQMFLEELGIEESGLDQLIKASYSLLGLATYFTAGEQEVRAWTFKK 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
G A + AGIIH+D +RGFIRA T++Y+D L G G K AGK+R EGK Y+V+DGD++
Sbjct: 301 GMKAPECAGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKDYVVKDGDVI 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|149203837|ref|ZP_01880806.1| translation-associated GTPase [Roseovarius sp. TM1035]
gi|149142954|gb|EDM30996.1| translation-associated GTPase [Roseovarius sp. TM1035]
Length = 365
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/364 (50%), Positives = 248/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M K G++GLPNVGKSTLFNALT+ + A N+PFCTIEPN+G + VPD RL L I
Sbjct: 1 MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAQIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P + VDIAGLV GASKGEGLGN+FLA+IRET+ + HV+RCF+D +TH+ G +
Sbjct: 61 SKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVEGRV 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+P+ DA+ I+TEL+LSDL +EK +K ++ + + +LL L + P R
Sbjct: 121 DPVADADTIETELMLSDLESVEKRRAGLQRKLKGGDKEAAQAERLLAAAQAALEEGRPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ ++ E++ + K L LLT KP+++V NV E N N + + A Q ++I A
Sbjct: 181 TVEVDAEDIKAWKMLQLLTAKPVLYVCNVDEGNAATGNTHSEAVAKMAAEQGAASVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
++EEEIS L + + FL +GL+E L+ LIRA + LL L TYFTVG KE RAWTIP G
Sbjct: 241 QIEEEISKLEPEEAEMFLTEMGLEEAGLDRLIRAGYGLLHLETYFTVGPKEARAWTIPAG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A +AAG+IH D +RGFIRA TI+Y DF+ GEQ K+AGK+RSEGK Y+V+DGD+L+
Sbjct: 301 TPAPKAAGVIHGDFERGFIRAETIAYDDFVTLGGEQKAKDAGKMRSEGKSYVVKDGDVLH 360
Query: 359 FLFN 362
FLFN
Sbjct: 361 FLFN 364
>gi|167629109|ref|YP_001679608.1| GTP-binding protein YchF [Heliobacterium modesticaldum Ice1]
gi|167591849|gb|ABZ83597.1| GTP-binding protein ychf [Heliobacterium modesticaldum Ice1]
Length = 366
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 254/366 (69%), Gaps = 3/366 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKISAENYPFCTIEPNIGIIEVPDKRLKHLNNIVKT 60
M ++ G++GLPNVGKSTLFNA+TK A NYPFCTIEPN+G++EVPD RL L +VK
Sbjct: 1 MPVQAGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDPRLDKLTEMVKP 60
Query: 61 KKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEIN 120
++ PA+++ VDIAGLV GASKGEGLGNKFL+HIRE + VIHV+RCF D +TH+ G+++
Sbjct: 61 NRVVPAVVRFVDIAGLVRGASKGEGLGNKFLSHIREVDAVIHVVRCFADPDVTHVDGKVS 120
Query: 121 PIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIRL 180
P+ D + I+ ELILSDL +E+ +D+ K ++ + + L +L+R+ P R
Sbjct: 121 PLRDIDTIELELILSDLEAVERRLDRVQKMLKSGDKKAQQELAVLQRLRDAFEDGKPARS 180
Query: 181 MSLNNEELMSIKFLNLLTIKPIIFVANVKEN--GFKNNLLLDQLKIYAHNQNIPIIIICA 238
+ EE ++ LLT KP+++VANV E+ G +N L+ ++ A + +++ICA
Sbjct: 181 IDWTPEEAEIVRNQFLLTSKPVLYVANVSEDDLGKADNPLVQDVRARADREGAGVVVICA 240
Query: 239 KLEEEISDLNNIDKK-FFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPN 297
K+E EI++L + +++ FL +LGLKE+ L+ LIR +++LL L TYFT G +E+RAWTIP
Sbjct: 241 KIEAEIAELTDPEERALFLKDLGLKESGLDRLIRETYALLGLITYFTAGVQEVRAWTIPR 300
Query: 298 GTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDIL 357
GT A QAAG+IHTD +RGFIRA +Y D + + + G R EGK+Y+++DGD++
Sbjct: 301 GTKAPQAAGVIHTDFERGFIRAEVTAYDDLVACGSQTAAREKGLQRLEGKEYVMKDGDVV 360
Query: 358 NFLFNI 363
+F FN+
Sbjct: 361 HFRFNV 366
>gi|384215563|ref|YP_005606729.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354954462|dbj|BAL07141.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 365
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/364 (50%), Positives = 251/364 (68%), Gaps = 2/364 (0%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALT+ + A NYPFCTIEPN+G + VPD RL L+ I K
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDSRLDKLSAIAK 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+ +I P + VDIAGLV GASKGEGLGN+FLA+IRE + + HV+RCF+D ITH+ G+I
Sbjct: 61 SAQIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDSDITHVEGKI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
P+ D E I+TEL+L+DL LEK +D KK ++ + E L L+ R + L + P R
Sbjct: 121 APLADIETIETELMLADLDSLEKRVDNLTKKAKGNDKDAKEQLDLVNRTLVLLREGKPAR 180
Query: 180 LMSLNNEELMSIKFLNLLTIKPIIFVANVKE-NGFKNNLLLDQLKIYAHNQNIPIIIICA 238
L+ EE + L LL+ KP+++V NV+E + N ++ A + ++I A
Sbjct: 181 LVERKAEEERAFGMLGLLSSKPVLYVCNVEEGSAATGNSFSKAVEEQAAKEGAVAVVISA 240
Query: 239 KLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIPNG 298
K+E EI+ ++ ++ FL+ LGL+E L+ LIRA ++LLDL TYFTVG KE RAWTI G
Sbjct: 241 KIESEIATISREERADFLETLGLEEAGLDRLIRAGYTLLDLITYFTVGPKEARAWTIYRG 300
Query: 299 TTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDILN 358
T A AAG+IHTD ++GFIRA TI+Y+D++ GE G ++AGK+R EGK+Y+V DGD+++
Sbjct: 301 TKAPGAAGVIHTDFEKGFIRAETIAYEDYVALNGEAGARDAGKLRLEGKEYVVADGDVMH 360
Query: 359 FLFN 362
F FN
Sbjct: 361 FRFN 364
>gi|395778450|ref|ZP_10458962.1| GTP-binding protein YchF [Bartonella elizabethae Re6043vi]
gi|423715239|ref|ZP_17689463.1| GTP-binding protein YchF [Bartonella elizabethae F9251]
gi|395417658|gb|EJF83995.1| GTP-binding protein YchF [Bartonella elizabethae Re6043vi]
gi|395430075|gb|EJF96126.1| GTP-binding protein YchF [Bartonella elizabethae F9251]
Length = 367
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 253/366 (69%), Gaps = 4/366 (1%)
Query: 1 MNLKCGLIGLPNVGKSTLFNALTKLKIS-AENYPFCTIEPNIGIIEVPDKRLKHLNNIVK 59
M KCG++GLPNVGKSTLFNALTK + A NYPFCTIEPN G + VPD R++ + +I
Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAG 60
Query: 60 TKKIFPAIIKLVDIAGLVSGASKGEGLGNKFLAHIRETNIVIHVIRCFKDDKITHISGEI 119
+K+I P I VDIAGLV GASKGEGLGNKFLA+IRE + +IHV+RCF+++ ITH+ G I
Sbjct: 61 SKEIIPTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQNEDITHVEGRI 120
Query: 120 NPIHDAEVIQTELILSDLAILEKYIDKENKKFFLKNEHSIELLKLLKRIIFNLNKSIPIR 179
+PI DA ++TEL+L+DL LE+ I + K+ K++ ++ +L ++++ + L + P+R
Sbjct: 121 DPISDATTVETELMLADLESLERRIVQIRKRAIGKDKEALTILPVMEKALNILQQGNPVR 180
Query: 180 LM--SLNNEELMSIKFLNLLTIKPIIFVANVKEN-GFKNNLLLDQLKIYAHNQNIPIIII 236
L+ + +E +K LNLLT KP+++V NV EN N ++ A QN III
Sbjct: 181 LLLKDIALDEHHILKSLNLLTSKPVLYVCNVSENDAAHGNNFTQAVEKMATEQNAQSIII 240
Query: 237 CAKLEEEISDLNNIDKKFFLDNLGLKETKLNDLIRASFSLLDLRTYFTVGKKEIRAWTIP 296
A +E EI+ L++ + +LD LGL E LN LIRA + LLDL TYFT G KE RAWTI
Sbjct: 241 SASIEAEITQLSDAEASEYLDALGLFEPSLNRLIRAGYHLLDLITYFTCGPKETRAWTIT 300
Query: 297 NGTTAEQAAGIIHTDIKRGFIRALTISYKDFLLYKGEQGCKNAGKIRSEGKKYLVEDGDI 356
GT A QAAG+IH+D +RGFIRA TISY D++ GE G K AGK R EGK+Y+V+DGDI
Sbjct: 301 RGTKAPQAAGVIHSDFERGFIRAQTISYNDYIALGGESGAKEAGKARDEGKEYIVQDGDI 360
Query: 357 LNFLFN 362
+ F N
Sbjct: 361 MLFKHN 366
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.142 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,499,359,392
Number of Sequences: 23463169
Number of extensions: 235981017
Number of successful extensions: 758460
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12448
Number of HSP's successfully gapped in prelim test: 1489
Number of HSP's that attempted gapping in prelim test: 730974
Number of HSP's gapped (non-prelim): 14840
length of query: 363
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 219
effective length of database: 8,980,499,031
effective search space: 1966729287789
effective search space used: 1966729287789
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)