Your job contains 1 sequence.
>psy2405
MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI
WFLSGSTNINFLKKNNIKIWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK
TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS
YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSL
DYNFEDFQINSYNPQKSIYAPIAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2405
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A884 - symbol:thyA "thymidylate synthase" spe... 923 1.1e-92 1
TIGR_CMR|SO_1335 - symbol:SO_1335 "thymidylate synthase" ... 907 5.7e-91 1
TIGR_CMR|CBU_1547 - symbol:CBU_1547 "thymidylate synthase... 885 1.2e-88 1
UNIPROTKB|P67044 - symbol:thyA "Thymidylate synthase" spe... 831 6.4e-83 1
UNIPROTKB|Q0C504 - symbol:thyA "Thymidylate synthase" spe... 808 1.8e-80 1
TIGR_CMR|BA_2236 - symbol:BA_2236 "thymidylate synthase" ... 583 9.5e-80 2
UNIPROTKB|F1N8Y2 - symbol:TYMS "Thymidylate synthase" spe... 515 3.2e-73 2
UNIPROTKB|P04818 - symbol:TYMS "Thymidylate synthase" spe... 509 8.6e-73 2
MGI|MGI:98878 - symbol:Tyms "thymidylate synthase" specie... 504 7.6e-72 2
RGD|3921 - symbol:Tyms "thymidylate synthetase" species:1... 504 7.6e-72 2
UNIPROTKB|F1PU23 - symbol:TYMS "Uncharacterized protein" ... 502 9.7e-72 2
UNIPROTKB|F1MY63 - symbol:TYMS "Thymidylate synthase" spe... 422 6.0e-71 3
UNIPROTKB|Q2TA32 - symbol:TYMS "Thymidylate synthase" spe... 422 6.0e-71 3
UNIPROTKB|F1PNL9 - symbol:TYMS "Uncharacterized protein" ... 420 2.0e-70 3
ZFIN|ZDB-GENE-040426-59 - symbol:tyms "thymidylate syntha... 485 1.1e-68 2
TAIR|locus:2139544 - symbol:THY-2 "thymidylate synthase 2... 444 4.8e-66 2
TAIR|locus:2042649 - symbol:THY-1 "thymidylate synthase 1... 432 8.7e-65 2
WB|WBGene00022455 - symbol:Y110A7A.4 species:6239 "Caenor... 434 1.1e-62 2
CGD|CAL0005915 - symbol:CDC21 species:5476 "Candida albic... 250 2.6e-61 3
UNIPROTKB|G4MSD5 - symbol:MGG_04458 "Thymidylate synthase... 227 1.9e-57 3
POMBASE|SPAC15E1.04 - symbol:SPAC15E1.04 "thymidylate syn... 400 9.6e-57 2
SGD|S000005600 - symbol:CDC21 "Thymidylate synthase" spec... 383 2.9e-56 2
UNIPROTKB|Q8WYK3 - symbol:TS "Thymidylate synthetase, iso... 565 9.9e-55 1
UNIPROTKB|Q8WYK4 - symbol:TS "Thymidylate synthase" speci... 467 3.7e-54 2
ASPGD|ASPL0000066643 - symbol:AN7028 species:162425 "Emer... 369 2.6e-52 2
FB|FBgn0024920 - symbol:Ts "Ts" species:7227 "Drosophila ... 503 3.7e-48 1
UNIPROTKB|I3LB48 - symbol:TYMS "Thymidylate synthase" spe... 459 1.7e-43 1
TAIR|locus:2049389 - symbol:AT2G21550 species:3702 "Arabi... 388 5.7e-36 1
UNIPROTKB|F1PNM3 - symbol:TYMS "Thymidylate synthase" spe... 339 8.8e-31 1
TIGR_CMR|CPS_3621 - symbol:CPS_3621 "thymidylate synthase... 282 9.7e-25 1
UNIPROTKB|O66108 - symbol:thyA "Thymidylate synthase" spe... 264 7.8e-23 1
TIGR_CMR|VC_0675 - symbol:VC_0675 "thymidylate synthase" ... 264 7.8e-23 1
UNIPROTKB|P67049 - symbol:thyA "Thymidylate synthase" spe... 228 5.1e-19 1
TIGR_CMR|DET_0819 - symbol:DET_0819 "thymidylate synthase... 114 0.00011 1
>UNIPROTKB|P0A884 [details] [associations]
symbol:thyA "thymidylate synthase" species:83333
"Escherichia coli K-12" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 GO:GO:0006417
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U29581 GO:GO:0003723 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:X03966 GO:GO:0006235 EMBL:J01710
eggNOG:COG0207 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
HOGENOM:HOG000257900 PIR:A00549 RefSeq:NP_417304.1
RefSeq:YP_491032.1 PDB:1AIQ PDB:1AJM PDB:1AN5 PDB:1AOB PDB:1AXW
PDB:1BDU PDB:1BID PDB:1BJG PDB:1BQ1 PDB:1BQ2 PDB:1DDU PDB:1DNA
PDB:1EV5 PDB:1EV8 PDB:1EVF PDB:1EVG PDB:1F4B PDB:1F4C PDB:1F4D
PDB:1F4E PDB:1F4F PDB:1F4G PDB:1FFL PDB:1FWM PDB:1JG0 PDB:1JTQ
PDB:1JTU PDB:1JUT PDB:1KCE PDB:1KZI PDB:1KZJ PDB:1NCE PDB:1QQQ
PDB:1SYN PDB:1TDU PDB:1TJS PDB:1TLC PDB:1TLS PDB:1TRG PDB:1TSD
PDB:1TSN PDB:1TYS PDB:1ZPR PDB:2A9W PDB:2BBQ PDB:2FTN PDB:2FTO
PDB:2FTQ PDB:2G8O PDB:2G8X PDB:2KCE PDB:2TSC PDB:2VET PDB:2VF0
PDB:3B5B PDB:3B9H PDB:3BFI PDB:3BGX PDB:3BHL PDB:3BHR PDB:3TMS
PDB:4F2V PDB:4GEV PDBsum:1AIQ PDBsum:1AJM PDBsum:1AN5 PDBsum:1AOB
PDBsum:1AXW PDBsum:1BDU PDBsum:1BID PDBsum:1BJG PDBsum:1BQ1
PDBsum:1BQ2 PDBsum:1DDU PDBsum:1DNA PDBsum:1EV5 PDBsum:1EV8
PDBsum:1EVF PDBsum:1EVG PDBsum:1F4B PDBsum:1F4C PDBsum:1F4D
PDBsum:1F4E PDBsum:1F4F PDBsum:1F4G PDBsum:1FFL PDBsum:1FWM
PDBsum:1JG0 PDBsum:1JTQ PDBsum:1JTU PDBsum:1JUT PDBsum:1KCE
PDBsum:1KZI PDBsum:1KZJ PDBsum:1NCE PDBsum:1QQQ PDBsum:1SYN
PDBsum:1TDU PDBsum:1TJS PDBsum:1TLC PDBsum:1TLS PDBsum:1TRG
PDBsum:1TSD PDBsum:1TSN PDBsum:1TYS PDBsum:1ZPR PDBsum:2A9W
PDBsum:2BBQ PDBsum:2FTN PDBsum:2FTO PDBsum:2FTQ PDBsum:2G8O
PDBsum:2G8X PDBsum:2KCE PDBsum:2TSC PDBsum:2VET PDBsum:2VF0
PDBsum:3B5B PDBsum:3B9H PDBsum:3BFI PDBsum:3BGX PDBsum:3BHL
PDBsum:3BHR PDBsum:3TMS PDBsum:4F2V PDBsum:4GEV
ProteinModelPortal:P0A884 SMR:P0A884 DIP:DIP-48261N IntAct:P0A884
MINT:MINT-1265510 PRIDE:P0A884 EnsemblBacteria:EBESCT00000001730
EnsemblBacteria:EBESCT00000017304 GeneID:12933064 GeneID:949035
KEGG:ecj:Y75_p2761 KEGG:eco:b2827 PATRIC:32121072 EchoBASE:EB0995
EcoGene:EG11002 BioCyc:EcoCyc:THYMIDYLATESYN-MONOMER
BioCyc:ECOL316407:JW2795-MONOMER
BioCyc:MetaCyc:THYMIDYLATESYN-MONOMER SABIO-RK:P0A884
BindingDB:P0A884 ChEMBL:CHEMBL2555 EvolutionaryTrace:P0A884
Genevestigator:P0A884 Uniprot:P0A884
Length = 264
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 164/264 (62%), Positives = 200/264 (75%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
M QYL M+ V + G +K DRTG GTLSIFG+QMRFNLQ GFPL+TTK+ H++SII+EL+
Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK 120
WFL G T WD+WADENGDLGP+YG QWR+WPT G++IDQ++ V+ Q+K
Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120
Query: 121 TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS 180
DP+SRRIIVSAWNV ++ KM L PCH FQFYVA+ KLSCQLYQRS D+FLGLPFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180
Query: 181 YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSL 240
Y+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I KP+S
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240
Query: 241 DYNFEDFQINSYNPQKSIYAPIAI 264
DY FEDF+I Y+P I AP+AI
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264
>TIGR_CMR|SO_1335 [details] [associations]
symbol:SO_1335 "thymidylate synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009157 "deoxyribonucleoside
monophosphate biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_716955.1 ProteinModelPortal:Q8EH94 SMR:Q8EH94
GeneID:1169156 KEGG:son:SO_1335 PATRIC:23522326 Uniprot:Q8EH94
Length = 264
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 160/264 (60%), Positives = 198/264 (75%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
M QYL+ M+H+ G+ K DRTG GT S+FGYQMRF+L KGFPL+TTKK H++SII+EL+
Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK 120
WFL G T WD+WADENGDLGP+YG QWRSWPT G+ IDQ+S VI QIK
Sbjct: 61 WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGEAIDQISQVIAQIK 120
Query: 121 TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS 180
+ P+SRR+IVSAWNV ++ KM L PCH FQFYVA+ KLSCQLYQRS D+FLGLPFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180
Query: 181 YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSL 240
Y+LL ++A + L +GDF+WTGGD HLY NH++Q QL R P LP +TIL KP S
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240
Query: 241 DYNFEDFQINSYNPQKSIYAPIAI 264
DY F+DF +++Y+P I AP+A+
Sbjct: 241 DYQFDDFALSNYDPHPHIKAPVAV 264
>TIGR_CMR|CBU_1547 [details] [associations]
symbol:CBU_1547 "thymidylate synthase" species:227377
"Coxiella burnetii RSA 493" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_820530.1 ProteinModelPortal:Q83BG2 SMR:Q83BG2
GeneID:1209457 KEGG:cbu:CBU_1547 PATRIC:17931857
BioCyc:CBUR227377:GJ7S-1527-MONOMER Uniprot:Q83BG2
Length = 264
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 155/264 (58%), Positives = 199/264 (75%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
M +YLNF++ + + G+ K DRTG+GT S+FGY+MRFNL++GFPL+TTKK+H+KS+IYEL+
Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK 120
WFL G T WD+WADENGDLGPIYG QWR W G+ +DQ+ +I++IK
Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120
Query: 121 TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS 180
T+P+SRR+IVSAWNV ++ +M LPPCH+LFQFYVA+ LSC+L QRSAD FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180
Query: 181 YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSL 240
YSLL H+IA + LK G+FIW+GGDCH+Y H DQ QL R P +LP L I P S
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240
Query: 241 DYNFEDFQINSYNPQKSIYAPIAI 264
DYNF DF I +Y+P +I AP+A+
Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264
>UNIPROTKB|P67044 [details] [associations]
symbol:thyA "Thymidylate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0004799 "thymidylate synthase
activity" evidence=IDA] [GO:0006231 "dTMP biosynthetic process"
evidence=IDA] [GO:0046079 "dUMP catabolic process" evidence=IDA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GO:GO:0046079 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL ProtClustDB:PRK01827 PIR:C70881 RefSeq:NP_217280.1
RefSeq:NP_337339.1 RefSeq:YP_006516209.1 PDB:3QJ7 PDBsum:3QJ7
ProteinModelPortal:P67044 SMR:P67044 PRIDE:P67044
EnsemblBacteria:EBMYCT00000000138 EnsemblBacteria:EBMYCT00000070853
GeneID:13319492 GeneID:887728 GeneID:925453 KEGG:mtc:MT2834
KEGG:mtu:Rv2764c KEGG:mtv:RVBD_2764c PATRIC:18127984
TubercuList:Rv2764c BioCyc:MetaCyc:MONOMER-15786 BindingDB:P67044
ChEMBL:CHEMBL1795162 Uniprot:P67044
Length = 263
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 147/264 (55%), Positives = 190/264 (71%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
M Y + +R V +G K DRTG GT S+FG QMR++L GFPLLTTKK+H KS+ YEL+
Sbjct: 1 MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK 120
WFL G + WD+WA + G+LGPIYG QWRSWP G++IDQ+S + ++
Sbjct: 61 WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120
Query: 121 TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS 180
TDP+SRRIIVSAWNV +I +M LPPCH FQFYVA+ +LSCQLYQRSAD+FLG+PFNIAS
Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180
Query: 181 YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSL 240
Y+LL H++A + GL VG+FIWTGGDCH+Y NH++Q R QL R P P L +L S
Sbjct: 181 YALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKL-LLADRDSIF 239
Query: 241 DYNFEDFQINSYNPQKSIYAPIAI 264
+Y +ED + +Y+P +I AP+A+
Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263
>UNIPROTKB|Q0C504 [details] [associations]
symbol:thyA "Thymidylate synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GO:GO:0009265 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:YP_759189.1 ProteinModelPortal:Q0C504 SMR:Q0C504
STRING:Q0C504 GeneID:4287829 KEGG:hne:HNE_0459 PATRIC:32213710
BioCyc:HNEP228405:GI69-503-MONOMER Uniprot:Q0C504
Length = 264
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 149/266 (56%), Positives = 194/266 (72%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
M QY +R + +G K+ DRTGVGT+ +FG QMRF+L +GFP++TTK+LH++SII EL+
Sbjct: 1 MQQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELL 60
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIK 120
WFL G T WD+WADENGDLGP+YG QWRSW T G+ IDQ+ V+ +I+
Sbjct: 61 WFLRGDTNIAYLKENGVSIWDEWADENGDLGPVYGKQWRSWATPNGEAIDQIQWVLNEIR 120
Query: 121 TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIAS 180
T+PNSRR+IVSAWN +D++ M LPPCH LFQF V + KL+CQLYQRSAD+FLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIAS 180
Query: 181 YSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKP-KSS 239
Y+LL ++A TGL+ G+F+ T GD HLYLNHL+QA QL R P LP TI P K+
Sbjct: 181 YALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLP--TIHMNPDKAD 238
Query: 240 L-DYNFEDFQINSYNPQKSIYAPIAI 264
L + +EDF+++ Y P I AP+A+
Sbjct: 239 LFGWEYEDFRVDGYAPHPHIKAPVAV 264
>TIGR_CMR|BA_2236 [details] [associations]
symbol:BA_2236 "thymidylate synthase" species:198094
"Bacillus anthracis str. Ames" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 RefSeq:NP_844627.1
RefSeq:YP_018881.1 RefSeq:YP_028345.1 ProteinModelPortal:Q81R23
SMR:Q81R23 DNASU:1085458 EnsemblBacteria:EBBACT00000013190
EnsemblBacteria:EBBACT00000017828 EnsemblBacteria:EBBACT00000020667
GeneID:1085458 GeneID:2814626 GeneID:2850789 KEGG:ban:BA_2236
KEGG:bar:GBAA_2236 KEGG:bat:BAS2082 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
BioCyc:BANT260799:GJAJ-2150-MONOMER
BioCyc:BANT261594:GJ7F-2225-MONOMER Uniprot:Q81R23
Length = 318
Score = 583 (210.3 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 106/184 (57%), Positives = 133/184 (72%)
Query: 81 DQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHK 140
D+++++ G LG +YG QWR+W T G+ +DQL VI+ IK P+SRR+IVSAWN D+
Sbjct: 135 DEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVSAWNPEDVPS 194
Query: 141 MKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFI 200
M LPPCH LFQFYVA+ KLSCQLYQRS DIFLG+PFNIASYSLL H+IAHE GL+VG+F+
Sbjct: 195 MALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFV 254
Query: 201 WTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYA 260
T GD H+Y NH +Q KQL R P P LT+ KS D+ ED I Y+P +I A
Sbjct: 255 HTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKA 314
Query: 261 PIAI 264
P+A+
Sbjct: 315 PVAV 318
Score = 237 (88.5 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 2 HQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIW 61
++YLN RHV G KK DRTG GT+S+FGYQMRF+L KGFPLLTTK++ + + EL+W
Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65
Query: 62 FLSGSTXXXXXXXXXXXXWDQWA 84
F+ G T W++WA
Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWA 88
>UNIPROTKB|F1N8Y2 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9031 "Gallus
gallus" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 EMBL:AADN02021326 IPI:IPI00592996
Ensembl:ENSGALT00000024028 Uniprot:F1N8Y2
Length = 312
Score = 515 (186.3 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 103/187 (55%), Positives = 126/187 (67%)
Query: 86 ENGDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + + Y +DQL VI+ IKT+P+ RRII+ AWN D
Sbjct: 126 EEGDLGPVYGFQWRHFGADYKDMHTDYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKD 185
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
I M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASYSLL ++IAH TGLK G
Sbjct: 186 ISLMALPPCHALCQFYVLNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPG 245
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
+FI T GD H+YLNH++ + QL R P LP L IL K + D+ EDFQI YNP
Sbjct: 246 EFIHTLGDAHIYLNHVEPLKVQLQREPRPLPKLRILRKVEDISDFKAEDFQIEDYNPHPP 305
Query: 258 IYAPIAI 264
I +A+
Sbjct: 306 IKMEMAV 312
Score = 243 (90.6 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 48/109 (44%), Positives = 66/109 (60%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL +RH+ G +K DRTG GT+S+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 31 QYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 90
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD ++ D E GDLGP+YG+QWR
Sbjct: 91 IKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTREEGDLGPVYGFQWR 139
>UNIPROTKB|P04818 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005976
"polysaccharide metabolic process" evidence=IEA] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0019088 "immortalization of host
cell by virus" evidence=IEA] [GO:0019860 "uracil metabolic process"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0034097
"response to cytokine stimulus" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IEA] [GO:0046078 "dUMP metabolic process" evidence=IEA]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IEA]
[GO:0048037 "cofactor binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEA] [GO:0051593 "response to folic acid"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=NAS]
[GO:0006260 "DNA replication" evidence=NAS] [GO:0006281 "DNA
repair" evidence=NAS] [GO:0046683 "response to organophosphorus"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=TAS]
[GO:0009157 "deoxyribonucleoside monophosphate biosynthetic
process" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000083 "regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0004799
"thymidylate synthase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046134 "pyrimidine nucleoside biosynthetic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005743 GO:GO:0000166
GO:GO:0042493 GO:GO:0005759 GO:GO:0006260 GO:GO:0007568
GO:GO:0031100 GO:GO:0006206 GO:GO:0006281 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0048015
GO:GO:0046683 GO:GO:0000083 GO:GO:0005542 DrugBank:DB01101
DrugBank:DB00441 DrugBank:DB00544 DrugBank:DB00642 GO:GO:0046134
GO:GO:0006231 Orphanet:240839 Orphanet:240855 Orphanet:240955
Orphanet:240963 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235
DrugBank:DB00293 DrugBank:DB00322 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP EMBL:X02308 EMBL:D00596
EMBL:AB062290 EMBL:BC002567 EMBL:BC013919 EMBL:BC083512 EMBL:D00517
IPI:IPI00221108 PIR:A23047 RefSeq:NP_001062.1 UniGene:Hs.369762
PDB:1HVY PDB:1HW3 PDB:1HW4 PDB:1HZW PDB:1I00 PDB:1JU6 PDB:1JUJ
PDB:1YPV PDB:2ONB PDB:2RD8 PDB:2RDA PDB:3EAW PDB:3EBU PDB:3ED7
PDB:3EDW PDB:3EF9 PDB:3EGY PDB:3EHI PDB:3EJL PDB:3GG5 PDB:3GH0
PDB:3GH2 PDB:3H9K PDB:3HB8 PDB:3N5E PDB:3N5G PDB:3OB7 PDB:4E28
PDB:4GYH PDB:4H1I PDBsum:1HVY PDBsum:1HW3 PDBsum:1HW4 PDBsum:1HZW
PDBsum:1I00 PDBsum:1JU6 PDBsum:1JUJ PDBsum:1YPV PDBsum:2ONB
PDBsum:2RD8 PDBsum:2RDA PDBsum:3EAW PDBsum:3EBU PDBsum:3ED7
PDBsum:3EDW PDBsum:3EF9 PDBsum:3EGY PDBsum:3EHI PDBsum:3EJL
PDBsum:3GG5 PDBsum:3GH0 PDBsum:3GH2 PDBsum:3H9K PDBsum:3HB8
PDBsum:3N5E PDBsum:3N5G PDBsum:3OB7 PDBsum:4E28 PDBsum:4GYH
PDBsum:4H1I DisProt:DP00073 ProteinModelPortal:P04818 SMR:P04818
IntAct:P04818 STRING:P04818 PhosphoSite:P04818 DMDM:136611
PaxDb:P04818 PRIDE:P04818 DNASU:7298 Ensembl:ENST00000323274
GeneID:7298 KEGG:hsa:7298 UCSC:uc010dka.1 GeneCards:GC18P000647
HGNC:HGNC:12441 HPA:CAB002784 MIM:188350 neXtProt:NX_P04818
PharmGKB:PA359 InParanoid:P04818 PhylomeDB:P04818
BioCyc:MetaCyc:HS11096-MONOMER SABIO-RK:P04818 BindingDB:P04818
ChEMBL:CHEMBL1952 ChiTaRS:TYMS DrugBank:DB00650 DrugBank:DB00432
EvolutionaryTrace:P04818 GenomeRNAi:7298 NextBio:28543
ArrayExpress:P04818 Bgee:P04818 CleanEx:HS_TYMS
Genevestigator:P04818 GermOnline:ENSG00000176890 GO:GO:0009157
GO:GO:0046078 GO:GO:0019088 Uniprot:P04818
Length = 313
Score = 509 (184.2 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 101/187 (54%), Positives = 127/187 (67%)
Query: 86 ENGDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + ++ Y +DQL VI IKT+P+ RRII+ AWN D
Sbjct: 127 EEGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRD 186
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH L QFYV N++LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGLK G
Sbjct: 187 LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPG 246
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DFI T GD H+YLNH++ + QL R P P L IL K + D+ EDFQI YNP +
Sbjct: 247 DFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPT 306
Query: 258 IYAPIAI 264
I +A+
Sbjct: 307 IKMEMAV 313
Score = 245 (91.3 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 48/109 (44%), Positives = 66/109 (60%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL ++H+ G++K DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD + D E GDLGP+YG+QWR
Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWR 140
>MGI|MGI:98878 [details] [associations]
symbol:Tyms "thymidylate synthase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=ISO]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0004799 "thymidylate
synthase activity" evidence=ISO] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0006231 "dTMP biosynthetic
process" evidence=ISO] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0046078 "dUMP
metabolic process" evidence=ISO] [GO:0048037 "cofactor binding"
evidence=ISO] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 MGI:MGI:98878
GO:GO:0005634 GO:GO:0005743 GO:GO:0000166 GO:GO:0042493
GO:GO:0005759 GO:GO:0007568 GO:GO:0031100 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0046683
GO:GO:0005542 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574
GO:GO:0006235 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL CTD:7298 HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP
GO:GO:0046078 GO:GO:0019088 EMBL:M13019 EMBL:M13352 EMBL:J02617
EMBL:M13347 EMBL:M13348 EMBL:M13349 EMBL:M13350 EMBL:M13351
EMBL:X14489 IPI:IPI00130734 PIR:A26323 RefSeq:NP_067263.1
UniGene:Mm.268395 PDB:3IHI PDB:4E5O PDB:4EB4 PDBsum:3IHI
PDBsum:4E5O PDBsum:4EB4 ProteinModelPortal:P07607 SMR:P07607
STRING:P07607 PhosphoSite:P07607 REPRODUCTION-2DPAGE:P07607
PaxDb:P07607 PRIDE:P07607 Ensembl:ENSMUST00000026846 GeneID:22171
KEGG:mmu:22171 InParanoid:P07607 BindingDB:P07607 ChEMBL:CHEMBL3160
EvolutionaryTrace:P07607 NextBio:302116 Bgee:P07607 CleanEx:MM_TYMS
Genevestigator:P07607 GermOnline:ENSMUSG00000025747 Uniprot:P07607
Length = 307
Score = 504 (182.5 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 99/189 (52%), Positives = 127/189 (67%)
Query: 84 ADENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNV 135
A + GDLGP+YG+QWR + G+ +DQL VI IKT+P+ RRII+ AWN
Sbjct: 119 ARQEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNP 178
Query: 136 SDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLK 195
D+ M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGL+
Sbjct: 179 KDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
Query: 196 VGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQ 255
GDF+ T GD H+YLNH++ + QL R P P L IL K ++ D+ EDFQI YNP
Sbjct: 239 PGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVETIDDFKVEDFQIEGYNPH 298
Query: 256 KSIYAPIAI 264
+I +A+
Sbjct: 299 PTIKMEMAV 307
Score = 241 (89.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 48/109 (44%), Positives = 64/109 (58%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ G KK DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD + D + GDLGP+YG+QWR
Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWR 134
>RGD|3921 [details] [associations]
symbol:Tyms "thymidylate synthetase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IPI] [GO:0004799 "thymidylate
synthase activity" evidence=IDA] [GO:0005542 "folic acid binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0005976 "polysaccharide
metabolic process" evidence=IEP] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006231 "dTMP biosynthetic
process" evidence=IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0007568 "aging" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008144 "drug binding"
evidence=IPI] [GO:0009636 "response to toxic substance" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0019088 "immortalization of host cell by virus" evidence=IEP]
[GO:0019860 "uracil metabolic process" evidence=IEP] [GO:0031100
"organ regeneration" evidence=IEP] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0033189 "response to vitamin
A" evidence=IEP] [GO:0034097 "response to cytokine stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0046078 "dUMP
metabolic process" evidence=IDA] [GO:0046653 "tetrahydrofolate
metabolic process" evidence=IEP] [GO:0046683 "response to
organophosphorus" evidence=IEA;ISO] [GO:0048037 "cofactor binding"
evidence=IDA] [GO:0048589 "developmental growth" evidence=IEP]
[GO:0051216 "cartilage development" evidence=IEP] [GO:0051384
"response to glucocorticoid stimulus" evidence=IEP] [GO:0051593
"response to folic acid" evidence=IEP] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 RGD:3921 GO:GO:0042803 GO:GO:0005730
GO:GO:0005743 GO:GO:0000166 GO:GO:0042493 GO:GO:0045471 GO:GO:0005759
GO:GO:0008144 GO:GO:0009636 GO:GO:0007568 GO:GO:0031100 GO:GO:0007623
GO:GO:0034097 GO:GO:0003729 GO:GO:0051384 GO:GO:0051593 GO:GO:0048037
GO:GO:0051216 GO:GO:0032570 GO:GO:0048589 GO:GO:0046683 GO:GO:0033189
GO:GO:0046653 GO:GO:0005542 GO:GO:0005976 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP GeneTree:ENSGT00390000014786
GO:GO:0046078 GO:GO:0019088 EMBL:L12138 EMBL:BC126093 IPI:IPI00207230
PIR:S53715 RefSeq:NP_062052.1 UniGene:Rn.162284 PDB:1RTS PDB:2TSR
PDBsum:1RTS PDBsum:2TSR ProteinModelPortal:P45352 SMR:P45352
STRING:P45352 PhosphoSite:P45352 Ensembl:ENSRNOT00000056243
GeneID:29261 KEGG:rno:29261 InParanoid:P45352 SABIO-RK:P45352
BindingDB:P45352 ChEMBL:CHEMBL4341 EvolutionaryTrace:P45352
NextBio:608588 Genevestigator:P45352 GermOnline:ENSRNOG00000037225
GO:GO:0019860 Uniprot:P45352
Length = 307
Score = 504 (182.5 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 99/189 (52%), Positives = 127/189 (67%)
Query: 84 ADENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNV 135
A + GDLGP+YG+QWR + G+ +DQL VI IKT+P+ RRII+ AWN
Sbjct: 119 ARQEGDLGPVYGFQWRHFGADYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNP 178
Query: 136 SDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLK 195
D+ M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGL+
Sbjct: 179 KDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
Query: 196 VGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQ 255
GDF+ T GD H+YLNH++ + QL R P P L IL K ++ D+ EDFQI YNP
Sbjct: 239 PGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVETIDDFKVEDFQIEGYNPH 298
Query: 256 KSIYAPIAI 264
+I +A+
Sbjct: 299 PTIKMEMAV 307
Score = 241 (89.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 48/109 (44%), Positives = 64/109 (58%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ G KK DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 26 QYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD + D + GDLGP+YG+QWR
Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWR 134
>UNIPROTKB|F1PU23 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
EMBL:AAEX03005468 Ensembl:ENSCAFT00000029138 Uniprot:F1PU23
Length = 314
Score = 502 (181.8 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 100/187 (53%), Positives = 124/187 (66%)
Query: 86 ENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGPIYG+QWR + G+ +DQL VI IKT+P+ RRII+ WN D
Sbjct: 128 EEGDLGPIYGFQWRHFGAEYKDKDSDYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKD 187
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGLK G
Sbjct: 188 LPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPG 247
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DFI T GD H+YLNH++ + QL R P P L IL + + D+ EDFQI YNP +
Sbjct: 248 DFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRRVEKIDDFKAEDFQIEGYNPHPT 307
Query: 258 IYAPIAI 264
I +A+
Sbjct: 308 IKMEMAV 314
Score = 242 (90.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 49/109 (44%), Positives = 65/109 (59%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ + G +K DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 33 QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD + D E GDLGPIYG+QWR
Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWR 141
>UNIPROTKB|F1MY63 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 IPI:IPI00708073 UniGene:Bt.7738
GeneTree:ENSGT00390000014786 EMBL:DAAA02056661
Ensembl:ENSBTAT00000009214 OMA:HDSIFDY Uniprot:F1MY63
Length = 354
Score = 422 (153.6 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 88 GDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSDIH 139
GDLGP+YG+QWR + + +Y +DQL VI IKT+PN RRII+ AWN D+
Sbjct: 132 GDLGPVYGFQWRHFGAEYKDMDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLP 191
Query: 140 KMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDF 199
M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH T LK GDF
Sbjct: 192 LMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDF 251
Query: 200 IWTGGDCHLYLNHLDQARKQLL 221
+ T GD H+YLNH++ + Q L
Sbjct: 252 VHTLGDAHIYLNHIEPLKTQAL 273
Score = 239 (89.2 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 47/109 (43%), Positives = 64/109 (58%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ G ++ DRTG GTLS+FG Q R+NL+ FPLLTTK++ K ++ EL+WF
Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94
Query: 63 LSGSTXXXXXXXXXXXXWDQ-----------WADE-NGDLGPIYGYQWR 99
+ GST WD ++D GDLGP+YG+QWR
Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWR 143
Score = 88 (36.0 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 219 QLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
+L R P P L IL K ++ D+ EDFQI YNP +I +A+
Sbjct: 309 ELQREPRPFPKLKILRKVETIDDFQAEDFQIEGYNPHPTIKMEMAV 354
>UNIPROTKB|Q2TA32 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006235 "dTTP
biosynthetic process" evidence=IEA] [GO:0004799 "thymidylate
synthase activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 EMBL:BC111139 EMBL:AH009263
IPI:IPI00708073 RefSeq:NP_001032905.1 UniGene:Bt.7738 HSSP:P04818
ProteinModelPortal:Q2TA32 SMR:Q2TA32 STRING:Q2TA32 PRIDE:Q2TA32
GeneID:507631 KEGG:bta:507631 CTD:7298 HOVERGEN:HBG001934
InParanoid:Q2TA32 OrthoDB:EOG4ZKJMP NextBio:20868149 Uniprot:Q2TA32
Length = 354
Score = 422 (153.6 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 88 GDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSDIH 139
GDLGP+YG+QWR + + +Y +DQL VI IKT+PN RRII+ AWN D+
Sbjct: 132 GDLGPVYGFQWRHFGAEYKDMDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLP 191
Query: 140 KMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDF 199
M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH T LK GDF
Sbjct: 192 LMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDF 251
Query: 200 IWTGGDCHLYLNHLDQARKQLL 221
+ T GD H+YLNH++ + Q L
Sbjct: 252 VHTLGDAHIYLNHIEPLKTQAL 273
Score = 239 (89.2 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 47/109 (43%), Positives = 64/109 (58%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ G ++ DRTG GTLS+FG Q R+NL+ FPLLTTK++ K ++ EL+WF
Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94
Query: 63 LSGSTXXXXXXXXXXXXWDQ-----------WADE-NGDLGPIYGYQWR 99
+ GST WD ++D GDLGP+YG+QWR
Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWR 143
Score = 88 (36.0 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 219 QLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
+L R P P L IL K ++ D+ EDFQI YNP +I +A+
Sbjct: 309 ELQREPRPFPKLKILRKVETIDDFQAEDFQIEGYNPNPTIKMEMAV 354
>UNIPROTKB|F1PNL9 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0046683 "response to organophosphorus"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0046683
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468 OMA:HDSIFDY
Ensembl:ENSCAFT00000036918 Uniprot:F1PNL9
Length = 354
Score = 420 (152.9 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 82/142 (57%), Positives = 100/142 (70%)
Query: 86 ENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGPIYG+QWR + G+ +DQL VI IKT+P+ RRII+ WN D
Sbjct: 128 EEGDLGPIYGFQWRHFGAEYKDKDSDYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKD 187
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGLK G
Sbjct: 188 LPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPG 247
Query: 198 DFIWTGGDCHLYLNHLDQARKQ 219
DFI T GD H+YLNH++ + Q
Sbjct: 248 DFIHTLGDAHIYLNHIEPLKIQ 269
Score = 242 (90.2 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 49/109 (44%), Positives = 65/109 (59%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL + H+ + G +K DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 33 QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
+ GST WD + D E GDLGPIYG+QWR
Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWR 141
Score = 82 (33.9 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 220 LLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
L R P P L IL + + D+ EDFQI YNP +I +A+
Sbjct: 310 LQREPRPFPKLRILRRVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 354
>ZFIN|ZDB-GENE-040426-59 [details] [associations]
symbol:tyms "thymidylate synthase" species:7955
"Danio rerio" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;IDA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0042083
"5,10-methylenetetrahydrofolate-dependent methyltransferase
activity" evidence=IDA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 ZFIN:ZDB-GENE-040426-59
GO:GO:0060041 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 HSSP:P04818 CTD:7298 HOVERGEN:HBG001934 EMBL:AY005804
IPI:IPI00510414 RefSeq:NP_571835.1 UniGene:Dr.1047
ProteinModelPortal:Q9DGH5 SMR:Q9DGH5 STRING:Q9DGH5 GeneID:81540
KEGG:dre:81540 InParanoid:Q9DGH5 NextBio:20934154
ArrayExpress:Q9DGH5 Uniprot:Q9DGH5
Length = 319
Score = 485 (175.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 95/187 (50%), Positives = 124/187 (66%)
Query: 86 ENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + G+ +DQL VI IK++P RRII+ AWN D
Sbjct: 133 EEGDLGPVYGFQWRHFGAEYKDMHTDYSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKD 192
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH L QFYV+N +LSCQLYQRS DI LG+PFNIASY+LL ++IAH TGLK G
Sbjct: 193 LPLMALPPCHALCQFYVSNGELSCQLYQRSGDIGLGVPFNIASYALLTYMIAHITGLKPG 252
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DF+ T GD H+Y NH++ ++Q+ R P P L I K + D+ EDF+I Y+P +
Sbjct: 253 DFVHTLGDAHIYTNHIEPLKEQIQREPRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPT 312
Query: 258 IYAPIAI 264
I +A+
Sbjct: 313 IKMQMAV 319
Score = 230 (86.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 46/108 (42%), Positives = 65/108 (60%)
Query: 4 YLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWFL 63
YL+ + + +G KK DRTG G +S+FG Q R++L+ FPLLTTK++ K I+ EL+WF+
Sbjct: 39 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98
Query: 64 SGSTXXXXXXXXXXXXWD-----QWADENG-------DLGPIYGYQWR 99
GST WD ++ D+NG DLGP+YG+QWR
Sbjct: 99 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWR 146
>TAIR|locus:2139544 [details] [associations]
symbol:THY-2 "thymidylate synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006545 "glycine biosynthetic process"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009257
"10-formyltetrahydrofolate biosynthetic process" evidence=ISS]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 InterPro:IPR020940 Pfam:PF00186 Pfam:PF00303
PIRSF:PIRSF000389 PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS00091
PROSITE:PS51330 UniPathway:UPA00077 InterPro:IPR024072
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006730 EMBL:AL161585
EMBL:AL023094 GO:GO:0009257 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 KO:K13998 ProtClustDB:CLSN2683596
GO:GO:0004146 GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10
Gene3D:3.40.430.10 InterPro:IPR023451 SUPFAM:SSF53597
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 EMBL:L08594 EMBL:AK227728
EMBL:BT003159 IPI:IPI00526255 PIR:T05277 RefSeq:NP_195183.2
UniGene:At.31491 ProteinModelPortal:Q05763 SMR:Q05763 STRING:Q05763
PaxDb:Q05763 PRIDE:Q05763 EnsemblPlants:AT4G34570.1 GeneID:829609
KEGG:ath:AT4G34570 TAIR:At4g34570 InParanoid:Q05763 OMA:CEAVHLT
PhylomeDB:Q05763 Genevestigator:Q05763 GermOnline:AT4G34570
Uniprot:Q05763
Length = 565
Score = 444 (161.4 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 92/187 (49%), Positives = 119/187 (63%)
Query: 86 ENGDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + + Y DQL VI +IK +P+ RRII+SAWN SD
Sbjct: 379 EEGDLGPVYGFQWRHFGAKYTDMHADYTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSD 438
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH+ QFYVAN +LSCQ+YQRSAD+ LG+PFNIASYSLL I+AH L G
Sbjct: 439 LKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDLVPG 498
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DFI GD H+Y NH+ ++QL P P L I + K + +DF++ Y+P K
Sbjct: 499 DFIHVIGDAHVYKNHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIGYDPHKK 558
Query: 258 IYAPIAI 264
I +A+
Sbjct: 559 IDMKMAV 565
Score = 246 (91.7 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 52/119 (43%), Positives = 71/119 (59%)
Query: 4 YLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWFL 63
YLN ++ + ++G K DRTG GTLS FG QM+FNL++ FPLLTTK++ + ++ EL+WF+
Sbjct: 285 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344
Query: 64 SGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWRSWPTLQGKYID 110
SGST WD + D E GDLGP+YG+QWR + KY D
Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGA---KYTD 400
>TAIR|locus:2042649 [details] [associations]
symbol:THY-1 "thymidylate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA] [GO:0006545
"glycine biosynthetic process" evidence=IEA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009257 "10-formyltetrahydrofolate biosynthetic
process" evidence=ISS] InterPro:IPR000398 InterPro:IPR001796
InterPro:IPR012262 InterPro:IPR017925 InterPro:IPR020940
Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389 PRINTS:PR00108
PROSITE:PS00075 PROSITE:PS00091 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006730 EMBL:AC007047 GO:GO:0009257
GO:GO:0006231 EMBL:L08593 EMBL:AY063968 EMBL:AY114032
IPI:IPI00530946 PIR:E84539 RefSeq:NP_179230.1 UniGene:At.27124
ProteinModelPortal:Q05762 SMR:Q05762 IntAct:Q05762 STRING:Q05762
PaxDb:Q05762 PRIDE:Q05762 EnsemblPlants:AT2G16370.1 GeneID:816134
KEGG:ath:AT2G16370 TAIR:At2g16370 eggNOG:COG0262
HOGENOM:HOG000257901 InParanoid:Q05762 KO:K13998 OMA:NGPACEA
PhylomeDB:Q05762 ProtClustDB:CLSN2683596 Genevestigator:Q05762
GermOnline:AT2G16370 GO:GO:0004146 GO:GO:0004799 GO:GO:0006545
Gene3D:3.30.572.10 Gene3D:3.40.430.10 InterPro:IPR023451
SUPFAM:SSF53597 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 Uniprot:Q05762
Length = 519
Score = 432 (157.1 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 89/187 (47%), Positives = 116/187 (62%)
Query: 86 ENGDLGPIYGYQWR----SWPTLQGKY----IDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + + Y DQL VI +IK +P+ RRII+SAWN SD
Sbjct: 333 EEGDLGPVYGFQWRHFGAKYTDMHADYTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSD 392
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ M LPPCH+ QFYVA +LSCQ+YQRSAD+ LG+PFNIASYSLL ++AH L G
Sbjct: 393 LKLMALPPCHMFAQFYVAEGELSCQMYQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPG 452
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DFI GD H+Y H+ ++QLL P P + I + K + DF + Y+P K
Sbjct: 453 DFIHVLGDAHVYKTHVRPLQEQLLNLPKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKK 512
Query: 258 IYAPIAI 264
I +A+
Sbjct: 513 IEMKMAV 519
Score = 246 (91.7 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 52/119 (43%), Positives = 71/119 (59%)
Query: 4 YLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWFL 63
YLN + + ++G K DRTG GTLS FG QM+FNL++ FPLLTTK++ + ++ EL+WF+
Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298
Query: 64 SGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWRSWPTLQGKYID 110
SGST WD ++ D E GDLGP+YG+QWR + KY D
Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGA---KYTD 354
>WB|WBGene00022455 [details] [associations]
symbol:Y110A7A.4 species:6239 "Caenorhabditis elegans"
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA;IDA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0009792
GO:GO:0010171 EMBL:FO080728 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
OMA:DTNVAYL HSSP:P04818 GeneTree:ENSGT00390000014786
RefSeq:NP_491532.3 ProteinModelPortal:Q9N588 SMR:Q9N588
STRING:Q9N588 PaxDb:Q9N588 EnsemblMetazoa:Y110A7A.4 GeneID:172149
KEGG:cel:CELE_Y110A7A.4 UCSC:Y110A7A.4 CTD:172149
WormBase:Y110A7A.4 InParanoid:Q9N588 NextBio:874229
ArrayExpress:Q9N588 Uniprot:Q9N588
Length = 312
Score = 434 (157.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 88/187 (47%), Positives = 117/187 (62%)
Query: 86 ENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + G+ +DQL+ VI+QIK P+SRRII+SAWN SD
Sbjct: 126 EEGDLGPVYGFQWRHFGAKYVDCHTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSD 185
Query: 138 IHKMKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
+ +M LPPCH + QFYV N +LSCQLYQRS D+ LG+PFN+ASY LL H+IA GLK G
Sbjct: 186 LGQMVLPPCHTMCQFYVDNGELSCQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPG 245
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
+ T GD H+Y NH+D + QL R P + P + S D+ + ++ Y
Sbjct: 246 TLVHTLGDAHVYSNHVDALKIQLDREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPK 305
Query: 258 IYAPIAI 264
I +A+
Sbjct: 306 IPMDMAV 312
Score = 224 (83.9 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 47/122 (38%), Positives = 70/122 (57%)
Query: 2 HQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKG-FPLLTTKKLHVKSIIYELI 60
++YL + + G ++ DRTG GT+SIFG Q ++ L+ G PLLTTK+++ K ++ EL+
Sbjct: 29 YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 88
Query: 61 WFLSGSTXXXXXXXXXXXXWDQWAD------------ENGDLGPIYGYQWRSWPTLQGKY 108
WF+SGST W++ D E GDLGP+YG+QWR + KY
Sbjct: 89 WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGA---KY 145
Query: 109 ID 110
+D
Sbjct: 146 VD 147
>CGD|CAL0005915 [details] [associations]
symbol:CDC21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 CGD:CAL0005915
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0006231 DrugBank:DB01099
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
EMBL:J04230 PIR:A32805 RefSeq:XP_714908.1 RefSeq:XP_714971.1
ProteinModelPortal:P12461 SMR:P12461 STRING:P12461 GeneID:3643367
GeneID:3643463 KEGG:cal:CaO19.11033 KEGG:cal:CaO19.3549
Uniprot:P12461
Length = 315
Score = 250 (93.1 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 55/116 (47%), Positives = 71/116 (61%)
Query: 151 QFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYL 210
Q A KLSC LYQRS D+ LG+PFNIASY+LL +IAH + G+FI T GD H+YL
Sbjct: 198 QAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGDAHVYL 257
Query: 211 NHLDQARKQLLRNPGSLPNLTILCKPKSSL----DYNFEDFQINSYNPQKSIYAPI 262
+H+D ++Q R P P L I + K+ + D+ FEDF+I Y P Y PI
Sbjct: 258 DHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEP----YPPI 309
Score = 204 (76.9 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 40/75 (53%), Positives = 49/75 (65%)
Query: 88 GDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIH 139
GDLGP+YG+QWR + G+ DQL VIK++KT+P RRII+SAWN D
Sbjct: 110 GDLGPVYGFQWRHFGAEYKDCDSDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFA 169
Query: 140 KMKLPPCHILFQFYV 154
KM LPPCH+ QFYV
Sbjct: 170 KMALPPCHVFCQFYV 184
Score = 203 (76.5 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 45/110 (40%), Positives = 64/110 (58%)
Query: 4 YLNFMRHVYNSGIKKIDRTGVGTLSIFGY-QMRFNLQKG-FPLLTTKKLHVKSIIYELIW 61
YL+ + + + G + DRTG GT S+F Q+RF+L FPLLTTKK+ K II+EL+W
Sbjct: 12 YLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71
Query: 62 FLSGSTXXXXXXXXXXXXWD-----QWADE-------NGDLGPIYGYQWR 99
F++GST W+ ++ D+ GDLGP+YG+QWR
Sbjct: 72 FVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWR 121
>UNIPROTKB|G4MSD5 [details] [associations]
symbol:MGG_04458 "Thymidylate synthase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
EMBL:CM001232 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 RefSeq:XP_003713554.1 ProteinModelPortal:G4MSD5
SMR:G4MSD5 EnsemblFungi:MGG_04458T0 GeneID:2678156
KEGG:mgr:MGG_04458 Uniprot:G4MSD5
Length = 339
Score = 227 (85.0 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 51/112 (45%), Positives = 66/112 (58%)
Query: 159 LSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARK 218
L CQLYQRS D+ LG+PFNIASY+LL H+IA TGL G GD H+Y +H+D R
Sbjct: 228 LHCQLYQRSCDMGLGVPFNIASYALLTHMIARATGLVPGSLTHVMGDAHVYADHVDALRT 287
Query: 219 QLLRNPGSLPNLTILCK--PKSS---LD-YNFEDFQINSYNPQKSIYAPIAI 264
QL R P P L I P+ +D + EDF I Y+P K+I +++
Sbjct: 288 QLEREPRPFPELEINRPEVPEGGDGVIDGWKLEDFVIKGYDPHKAIAMKMSV 339
Score = 202 (76.2 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 45/115 (39%), Positives = 68/115 (59%)
Query: 2 HQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQ-MRFNLQKG----FPLLTTKKLHVKSII 56
+QYL+ +R + ++G + DRTG GT SIF + ++F+L K PLLTTK++ +++I
Sbjct: 19 YQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPILPLLTTKRVFSRAVI 78
Query: 57 YELIWFLSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWR 99
EL+WF+SG+T WD ++ D E GDLGP+YG+QWR
Sbjct: 79 LELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGDLGPVYGFQWR 133
Score = 191 (72.3 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 86 ENGDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSD 137
E GDLGP+YG+QWR + G+ +DQL+ V+ +++T+P RR+++SAWN D
Sbjct: 120 EVGDLGPVYGFQWRHFGAEYTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKD 179
Query: 138 IHKMKLPPCHILFQFYVANNK 158
+ M LPPCH+ QFYV+ K
Sbjct: 180 LKLMVLPPCHMFAQFYVSYPK 200
>POMBASE|SPAC15E1.04 [details] [associations]
symbol:SPAC15E1.04 "thymidylate synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006231 "dTMP biosynthetic process" evidence=ISS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISM]
InterPro:IPR000398 InterPro:IPR003382 InterPro:IPR020940
Pfam:PF00303 Pfam:PF02441 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 PomBase:SPAC15E1.04 GO:GO:0005829 EMBL:CU329670
GO:GO:0050660 eggNOG:COG0452 KO:K01598 Gene3D:3.40.50.1950
SUPFAM:SSF52507 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
PIR:T37719 RefSeq:NP_594305.1 HSSP:P13100 ProteinModelPortal:Q9UTI7
SMR:Q9UTI7 STRING:Q9UTI7 EnsemblFungi:SPAC15E1.04.1 GeneID:2542801
KEGG:spo:SPAC15E1.04 OrthoDB:EOG418FX9 NextBio:20803844
Uniprot:Q9UTI7
Length = 625
Score = 400 (145.9 bits), Expect = 9.6e-57, Sum P(2) = 9.6e-57
Identities = 89/193 (46%), Positives = 116/193 (60%)
Query: 88 GDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIH 139
GDLGPIYG+QWR + K +DQL+ VI +K +P RRII+SAWN I
Sbjct: 431 GDLGPIYGFQWRHFGAQYVDCDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIP 490
Query: 140 KMKLPPCHILFQFYVANN-------KLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHET 192
+M LPPCHI QFYV+ +LS +YQRSAD+ LG+PFNIASYSLL H+IAH
Sbjct: 491 EMALPPCHIFCQFYVSEPCKPGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMC 550
Query: 193 GLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL--CKPKSSLD-YNFEDFQI 249
G + +F+ GDCH+Y +HL+ + QL R P + P L K S+D ++ +DF +
Sbjct: 551 GYEAAEFVHVMGDCHIYNDHLEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAV 610
Query: 250 NSYNPQKSIYAPI 262
YNP Y PI
Sbjct: 611 EGYNP----YGPI 619
Score = 209 (78.6 bits), Expect = 9.6e-57, Sum P(2) = 9.6e-57
Identities = 46/122 (37%), Positives = 69/122 (56%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGY-QMRFNLQKG-FPLLTTKKLHVKSIIYELI 60
QYLN +R++ +G + DRTG GT S+F Q+RF+L+ PLLTTK++ ++ ++ EL+
Sbjct: 332 QYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEELL 391
Query: 61 WFLSGSTXXXXXXXXXXXXWD-----QWADENG-------DLGPIYGYQWRSWPTLQGKY 108
WF+ G T WD ++ D G DLGPIYG+QWR + +Y
Sbjct: 392 WFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGA---QY 448
Query: 109 ID 110
+D
Sbjct: 449 VD 450
>SGD|S000005600 [details] [associations]
symbol:CDC21 "Thymidylate synthase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;TAS] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 SGD:S000005600
GO:GO:0005634 EMBL:BK006948 EMBL:Z70678 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 OrthoDB:EOG418FX9 EMBL:J02706
EMBL:Z74982 EMBL:M29100 PIR:S66957 RefSeq:NP_014717.2
ProteinModelPortal:P06785 SMR:P06785 DIP:DIP-2786N IntAct:P06785
MINT:MINT-562757 STRING:P06785 PaxDb:P06785 PeptideAtlas:P06785
EnsemblFungi:YOR074C GeneID:854241 KEGG:sce:YOR074C CYGD:YOR074c
NextBio:976141 Genevestigator:P06785 Uniprot:P06785
Length = 304
Score = 383 (139.9 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 80/168 (47%), Positives = 105/168 (62%)
Query: 106 GKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNK------- 158
G+ IDQL VI ++KT+P RRII+SAWN +D KM LPPCHI QFYV+ K
Sbjct: 137 GQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGK 196
Query: 159 --LSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQA 216
LSC LYQRS D+ LG+PFNIASY+LL +IA ++ G+FI T GD H+Y +H+D
Sbjct: 197 PRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDAL 256
Query: 217 RKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
++Q+ RNP P L I K D+ DF+I YNP I +++
Sbjct: 257 KEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304
Score = 214 (80.4 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 52/135 (38%), Positives = 73/135 (54%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGY-QMRFNLQKG-FPLLTTKKLHVKSIIYELI 60
QYL+ + + + G + DRTG GTLS+F Q+RF+L+ FPLLTTKK+ + II EL+
Sbjct: 12 QYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILELL 71
Query: 61 WFLSGSTXXXXXXXXXXXXWD-----QWADENG-------DLGPIYGYQWR----SWPTL 104
WFL+G T WD ++ D+ G DLGP+YG+QWR + T
Sbjct: 72 WFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKTC 131
Query: 105 QGKYIDQLSGVIKQI 119
Y Q +KQ+
Sbjct: 132 DDDYTGQGIDQLKQV 146
>UNIPROTKB|Q8WYK3 [details] [associations]
symbol:TS "Thymidylate synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004799 "thymidylate synthase
activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 Pfam:PF00303
PRINTS:PR00108 GO:GO:0005737 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077208 IPI:IPI00103732 SMR:Q8WYK3 STRING:Q8WYK3
Ensembl:ENST00000323224 UCSC:uc010dkb.1 Uniprot:Q8WYK3
Length = 279
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 124/274 (45%), Positives = 161/274 (58%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWF 62
QYL ++H+ G++K DRTG GTLS+FG Q R++L+ FPLLTTK++ K ++ EL+WF
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91
Query: 63 LSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQWRSWPTLQGKYID 110
+ GST WD + D E GDLGP+YG+QWR + +Y D
Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGA---EYRD 148
Query: 111 QLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSADI 170
SD+ M LPPCH L QFYV N++LSCQLYQRS D+
Sbjct: 149 M-----------------------ESDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185
Query: 171 FLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNL 230
LG+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245
Query: 231 TILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
IL K + D+ EDFQI YNP +I +A+
Sbjct: 246 RILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279
>UNIPROTKB|Q8WYK4 [details] [associations]
symbol:TS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077207 IPI:IPI00103733 SMR:Q8WYK4 STRING:Q8WYK4
Ensembl:ENST00000323250 UCSC:uc010dkc.1 H-InvDB:HIX0021150
Uniprot:Q8WYK4
Length = 230
Score = 467 (169.5 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 94/173 (54%), Positives = 118/173 (68%)
Query: 93 IYGYQWR-SWPTLQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQ 151
++G Q R S G+ +DQL VI IKT+P+ RRII+ AWN D+ M LPPCH L Q
Sbjct: 58 VFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117
Query: 152 FYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLN 211
FYV N++LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLN
Sbjct: 118 FYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 177
Query: 212 HLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
H++ + QL R P P L IL K + D+ EDFQI YNP +I +A+
Sbjct: 178 HIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230
Score = 110 (43.8 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 3 QYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQ 39
QYL ++H+ G++K DRTG GTLS+FG Q R++L+
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLR 68
>ASPGD|ASPL0000066643 [details] [associations]
symbol:AN7028 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004799 "thymidylate synthase activity"
evidence=RCA] [GO:0008616 "queuosine biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0008479 "queuine tRNA-ribosyltransferase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR002616 InterPro:IPR004803
InterPro:IPR020940 Pfam:PF00303 Pfam:PF01702 PRINTS:PR00108
PROSITE:PS00091 EMBL:BN001304 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0008616 GO:GO:0008479 Gene3D:3.20.20.105
SUPFAM:SSF51713 TIGRFAMs:TIGR00449 TIGRFAMs:TIGR00430
EnsemblFungi:CADANIAT00000445 Uniprot:C8VB77
Length = 674
Score = 369 (135.0 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 77/174 (44%), Positives = 110/174 (63%)
Query: 106 GKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVA---------- 155
G+ +DQL+ ++++IK P RRII+SAWN +D+ KM LPPCH+ Q+YV+
Sbjct: 501 GQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMFAQYYVSYPEGIEDGKG 560
Query: 156 --NNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHL 213
+LSC LYQRS D+ LG+PFNIASY+LL HIIAH T L G I T GD H+YL+H+
Sbjct: 561 KGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPGKLIHTMGDAHVYLDHV 620
Query: 214 DQARKQLLRNPGSLPNLTILCKPKSS--LD-YNFEDFQINSYNPQKSIYAPIAI 264
+ +QL R P P L I + + S +D + E+F++ Y P K+I +++
Sbjct: 621 EALEEQLTREPTDFPELKIKREDRGSGVIDGWKEEEFEVIGYAPHKAIKMKMSV 674
Score = 204 (76.9 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 51/133 (38%), Positives = 71/133 (53%)
Query: 2 HQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQ-MRFNLQKG-----------FPLLTTKK 49
HQYLN +R + G + DRTG GT SIF MRF+L K PLLTTK+
Sbjct: 365 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 424
Query: 50 LHVKSIIYELIWFLSGSTXXXXXXXXXXXXWD-----QWAD-------ENGDLGPIYGYQ 97
+ +++++ EL+WF+SGST WD ++ D E GDLGP+YG+Q
Sbjct: 425 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 484
Query: 98 WRSWPTLQGKYID 110
WR + +Y+D
Sbjct: 485 WRHFGA---EYVD 494
>FB|FBgn0024920 [details] [associations]
symbol:Ts "Ts" species:7227 "Drosophila melanogaster"
[GO:0004799 "thymidylate synthase activity" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=NAS] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 EMBL:AE014134 GO:GO:0022008 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AF073994 eggNOG:COG0207
KO:K00560 OMA:DTNVAYL RefSeq:NP_477367.1 UniGene:Dm.30804
ProteinModelPortal:O76511 SMR:O76511 DIP:DIP-20012N
MINT:MINT-326941 STRING:O76511 PaxDb:O76511 PRIDE:O76511
EnsemblMetazoa:FBtr0077679 GeneID:33499 KEGG:dme:Dmel_CG3181
CTD:33499 FlyBase:FBgn0024920 GeneTree:ENSGT00390000014786
InParanoid:O76511 OrthoDB:EOG495X7Q PhylomeDB:O76511
GenomeRNAi:33499 NextBio:783907 Bgee:O76511 GermOnline:CG3181
Uniprot:O76511
Length = 321
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/187 (54%), Positives = 126/187 (67%)
Query: 88 GDLGPIYGYQWRSWPT--------LQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIH 139
GDLGP+YG+QWR + GK IDQL VI I+ +P+ RRII+SAWN DI
Sbjct: 135 GDLGPVYGFQWRHFGAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIP 194
Query: 140 KMKLPPCHILFQFYVANNK--LSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVG 197
KM LPPCH L QFYV+ + LSCQLYQRSAD+ LG+PFNIASY+LL H+IAH TGLK G
Sbjct: 195 KMALPPCHCLAQFYVSEKRGELSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPG 254
Query: 198 DFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKS 257
DF+ T GD H+YLNH++ ++QL R P P L I + + D+ FEDFQI YNP
Sbjct: 255 DFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPK 314
Query: 258 IYAPIAI 264
I +A+
Sbjct: 315 IQMDMAV 321
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 1 MHQYLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELI 60
MH YL+ +RH+ +G +++DRT VGTLS+FG QMRF+++ FPLLTTK++ +++ EL+
Sbjct: 37 MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95
Query: 61 WFLSGSTXXXXXXXXXXXXWD-----QWADENG-------DLGPIYGYQWRSWPTLQGKY 108
WF++G T WD ++ D+ G DLGP+YG+QWR + G
Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155
Query: 109 IDQLSGV-IKQIK 120
D SG I Q++
Sbjct: 156 DDDYSGKGIDQLR 168
>UNIPROTKB|I3LB48 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9823 "Sus
scrofa" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634 GO:GO:0005743
GO:GO:0005759 GO:GO:0046683 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
Ensembl:ENSSSCT00000031689 OMA:RINDFKA Uniprot:I3LB48
Length = 163
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 89/159 (55%), Positives = 111/159 (69%)
Query: 106 GKYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQ 165
G+ +DQL VI IKT+P+ RRII+ AWN D+ M LPPCH L QFYV N +LSCQLYQ
Sbjct: 5 GQGVDQLQKVIDTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQ 64
Query: 166 RSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPG 225
RS D+ LG+PFNIASY+LL ++IAH TGLK GDF+ T GD H+YLNH++ + QL R P
Sbjct: 65 RSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPR 124
Query: 226 SLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 264
P L IL K + D+ EDFQI YNP +I +A+
Sbjct: 125 PFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 163
>TAIR|locus:2049389 [details] [associations]
symbol:AT2G21550 species:3702 "Arabidopsis thaliana"
[GO:0004146 "dihydrofolate reductase activity" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0006545 "glycine
biosynthetic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389
PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006730 GO:GO:0046654 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 ProtClustDB:CLSN2683596 GO:GO:0004146
GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10 Gene3D:3.40.430.10
InterPro:IPR023451 SUPFAM:SSF53597 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:AC007119 HSSP:P13100 IPI:IPI00533060
PIR:F84602 RefSeq:NP_179750.1 UniGene:At.50088
ProteinModelPortal:Q9SIK4 SMR:Q9SIK4 STRING:Q9SIK4
EnsemblPlants:AT2G21550.1 GeneID:816694 KEGG:ath:AT2G21550
TAIR:At2g21550 InParanoid:Q9SIK4 OMA:CHNIAID PhylomeDB:Q9SIK4
ArrayExpress:Q9SIK4 Genevestigator:Q9SIK4 Uniprot:Q9SIK4
Length = 492
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 100/257 (38%), Positives = 142/257 (55%)
Query: 4 YLNFMRHVYNSGIKKIDRTGVGTLSIFGYQMRFNLQKGFPLLTTKKLHVKSIIYELIWFL 63
YLN ++++ +SG D TLS FG QMRFNL+K FPLLTTKK+ ++ E++ +
Sbjct: 238 YLNLVQNIISSG----DMNDNSTLSKFGCQMRFNLRKTFPLLTTKKIFWLGVVEEILQLI 293
Query: 64 SGSTXXXXXXXXXXXXWD-----QWAD--------ENGDLGPIYGYQWRSWPT-LQGKYI 109
SGS WD ++ D E+GD ++G W+ +
Sbjct: 294 SGSNNPKENGSHI---WDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHCDARFVIQEF 350
Query: 110 DQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQRSAD 169
QLS VI +IK +P+ +RI+++A N D K+ + PCH QFYVAN ++SCQ+YQ S +
Sbjct: 351 SQLSDVINKIKNNPHDQRIMLAACNPLDF-KLSVSPCHTFTQFYVANGEVSCQIYQSSTE 409
Query: 170 IFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPN 229
+G+PF+IA+YSLL IIAH L GDFI G ++ H+ +KQL +P P
Sbjct: 410 ASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKPFPI 469
Query: 230 LTILCKP-KSSLDYNFE 245
L I P K +D NFE
Sbjct: 470 LKI--NPEKKKMD-NFE 483
>UNIPROTKB|F1PNM3 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 UniPathway:UPA00575
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468
Ensembl:ENSCAFT00000018205 Uniprot:F1PNM3
Length = 135
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 66/109 (60%), Positives = 79/109 (72%)
Query: 141 MKLPPCHILFQFYVANNKLSCQLYQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFI 200
M LPPCH L QFYV N +LSCQLYQRS D+ LG+PFNIASY+LL ++IAH TGLK GDFI
Sbjct: 1 MALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFI 60
Query: 201 WTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFEDFQI 249
T GD H+YLNH++ + QL R P P L IL + + D+ EDFQI
Sbjct: 61 HTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRRVEKIDDFKAEDFQI 109
>TIGR_CMR|CPS_3621 [details] [associations]
symbol:CPS_3621 "thymidylate synthase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
ProtClustDB:PRK01827 RefSeq:YP_270289.1 HSSP:P0A884
ProteinModelPortal:Q47Y31 STRING:Q47Y31 GeneID:3519813
KEGG:cps:CPS_3621 PATRIC:21470169 HOGENOM:HOG000257900 OMA:KSWDANA
BioCyc:CPSY167879:GI48-3643-MONOMER Uniprot:Q47Y31
Length = 283
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 81/283 (28%), Positives = 129/283 (45%)
Query: 1 MHQYLNFMRHVYNSGI-KKIDRTGVGTLSIFGYQMRFNLQKG-FPLLTTKKLHVKSIIYE 58
M YL+ + + + G + +RTG L++ + +N+ FPL+TT+K KS I E
Sbjct: 1 MRAYLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAE 60
Query: 59 LIWFLSGSTXXXXXXXXXXXXWDQWADENG------------DLGPIYGYQWRSWPTLQG 106
I ++ G WD A+ N D+G +YG Q R+W G
Sbjct: 61 FIGYIRGYDSAADFRKLGTKTWDANANLNDAWLNNTHRKGEDDMGRVYGIQGRAWAKPDG 120
Query: 107 KYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQR 166
IDQL ++ +K + R I++ +N + H L PC F + + L +QR
Sbjct: 121 GTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180
Query: 167 SADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARK-QLLRNPG 225
S D+ LGL FN + + ++A TG K G + H+Y + L ++ QL R P
Sbjct: 181 SCDVPLGLNFNQVQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKREPL 240
Query: 226 SLPNLTILCKPKSSLDYN----FEDFQINSYNPQKSIYAPIAI 264
+LP L I + KS D +DF++ Y ++I P A+
Sbjct: 241 ALPKLIINPEIKSLEDLETWVTMDDFKVEGYECHEAIKYPFAV 283
>UNIPROTKB|O66108 [details] [associations]
symbol:thyA "Thymidylate synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AJ006514 GO:GO:0009265
eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827 OMA:KSWDANA
EMBL:Y17135 EMBL:AY143429 PIR:C82295 RefSeq:NP_230324.1
ProteinModelPortal:O66108 DNASU:2615464 GeneID:2615464
KEGG:vch:VC0675 PATRIC:20080467 Uniprot:O66108
Length = 283
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 77/283 (27%), Positives = 127/283 (44%)
Query: 1 MHQYLNFMRHVYNSGI-KKIDRTGVGTLSIFGYQMRFNLQKG-FPLLTTKKLHVKSIIYE 58
M QYL+ + + + G+ + +RTG L++ + +++ FPL+TT+K K+ + E
Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60
Query: 59 LIWFLSGSTXXXXXXXXXXXXWDQWADEN----------G--DLGPIYGYQWRSWPTLQG 106
L+ ++ G WD A+ N G D+G +YG Q R+W G
Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120
Query: 107 KYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQR 166
+IDQL ++ + + R I++ +N + H L PC F + + L QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180
Query: 167 SADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARK-QLLRNPG 225
S D+ LGL FN+ + + ++A TG K G + H+Y + L+ R QL R P
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240
Query: 226 SLPNLTILCKPKSSLDYN----FEDFQINSYNPQKSIYAPIAI 264
P I K K+ D +DF + Y I P ++
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283
>TIGR_CMR|VC_0675 [details] [associations]
symbol:VC_0675 "thymidylate synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AJ006514 GO:GO:0009265
eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827 OMA:KSWDANA
EMBL:Y17135 EMBL:AY143429 PIR:C82295 RefSeq:NP_230324.1
ProteinModelPortal:O66108 DNASU:2615464 GeneID:2615464
KEGG:vch:VC0675 PATRIC:20080467 Uniprot:O66108
Length = 283
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 77/283 (27%), Positives = 127/283 (44%)
Query: 1 MHQYLNFMRHVYNSGI-KKIDRTGVGTLSIFGYQMRFNLQKG-FPLLTTKKLHVKSIIYE 58
M QYL+ + + + G+ + +RTG L++ + +++ FPL+TT+K K+ + E
Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60
Query: 59 LIWFLSGSTXXXXXXXXXXXXWDQWADEN----------G--DLGPIYGYQWRSWPTLQG 106
L+ ++ G WD A+ N G D+G +YG Q R+W G
Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120
Query: 107 KYIDQLSGVIKQIKTDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQLYQR 166
+IDQL ++ + + R I++ +N + H L PC F + + L QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180
Query: 167 SADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARK-QLLRNPG 225
S D+ LGL FN+ + + ++A TG K G + H+Y + L+ R QL R P
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240
Query: 226 SLPNLTILCKPKSSLDYN----FEDFQINSYNPQKSIYAPIAI 264
P I K K+ D +DF + Y I P ++
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283
>UNIPROTKB|P67049 [details] [associations]
symbol:thyA "Thymidylate synthase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005737 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
GO:GO:0006235 eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827
PIR:E95077 RefSeq:NP_345174.1 ProteinModelPortal:P67049
IntAct:P67049 EnsemblBacteria:EBSTRT00000026100 GeneID:930618
KEGG:spn:SP_0669 PATRIC:19705703 HOGENOM:HOG000257898 OMA:ANPWNRR
Uniprot:P67049
Length = 279
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 71/247 (28%), Positives = 115/247 (46%)
Query: 20 DRTGVGTLSIFGYQMRFNLQKG-FPLLTTKKLHVKSIIYELIWFLS--GSTXXXXXXXXX 76
D T + + G ++L KG FP+ T + + +KS I E++W ++
Sbjct: 31 DGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKYN 90
Query: 77 XXXWDQWADENGDLGPIYGYQWRSWPTLQGKYIDQLSGVIKQIKTDPNSRRIIVSAWNVS 136
W+ W E GD G I G ++ + + K+ D ++ ++KQ++T+P +RR I+S W+
Sbjct: 91 VHYWNDW--EVGDTGTI-GERYGA---VVKKH-DIINKLLKQLETNPWNRRNIISLWDYQ 143
Query: 137 DIHKMK-LPPCHILFQFYVANNK----LSCQLYQRSADIFLGLPFNIASYSLLIHIIAHE 191
+ L PC F V L L QRS D+ + N Y L +IA
Sbjct: 144 AFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKH 203
Query: 192 TGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSS--LDYNFEDFQI 249
G KVG F + + H+Y N +QA++ L R P + +L P + D EDF++
Sbjct: 204 FGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDFEL 263
Query: 250 NSYNPQK 256
Y+P K
Sbjct: 264 VDYDPVK 270
>TIGR_CMR|DET_0819 [details] [associations]
symbol:DET_0819 "thymidylate synthase, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004799
"thymidylate synthase activity" evidence=ISS] [GO:0006231 "dTMP
biosynthetic process" evidence=ISS] InterPro:IPR000398
InterPro:IPR014620 Pfam:PF00303 PIRSF:PIRSF036752 GO:GO:0005737
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831 GO:GO:0006235
eggNOG:COG0207 KO:K00560 RefSeq:YP_181546.1
ProteinModelPortal:Q3Z8A3 STRING:Q3Z8A3 GeneID:3229916
KEGG:det:DET0819 PATRIC:21608697 HOGENOM:HOG000275357 OMA:GAYPANL
ProtClustDB:CLSK935610 BioCyc:DETH243164:GJNF-820-MONOMER
Uniprot:Q3Z8A3
Length = 217
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 106 GKYID-QLSGVIKQIK-TDPNSRRIIVSAWNVSDIHKMKLPPCHILFQFYVANNKLSCQL 163
G+Y++ Q++ VIK + T N+ + ++ N + ++ PPC + KL +
Sbjct: 97 GQYLEAQIAKVIKMYRDTGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRIRYGKLHFVI 155
Query: 164 YQRSADIFLGLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLY 209
Y RS D++ G P N+A+ +L +A E G++ G+ I H+Y
Sbjct: 156 YFRSWDLWAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIY 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 252 0.00082 114 3 11 22 0.41 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 622 (66 KB)
Total size of DFA: 226 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.98u 0.09s 20.07t Elapsed: 00:00:09
Total cpu time: 19.98u 0.09s 20.07t Elapsed: 00:00:10
Start: Thu Aug 15 14:52:37 2013 End: Thu Aug 15 14:52:47 2013