Your job contains 1 sequence.
>psy2406
MEIHEIFNNIGVKAVKIGTNACENAPSANNLRNKFGIRKAILKASVYIDAPNTRANNISR
NNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTI
IRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQ
IFRKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIK
IREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAG
VQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLS
ISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLY
TAMEKLLEEVSFNSNNISLLVDADYVNSRLGDLSINEDLSRYVL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2406
(464 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 1165 2.6e-118 1
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 1151 7.9e-117 1
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 1142 7.1e-116 1
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 1133 6.4e-115 1
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 1126 3.5e-114 1
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 1101 1.6e-111 1
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 1101 1.6e-111 1
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 967 2.5e-97 1
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 966 3.2e-97 1
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 946 4.2e-95 1
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 901 2.5e-90 1
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 892 2.2e-89 1
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 832 5.0e-83 1
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 730 3.2e-72 1
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 135 3.1e-21 3
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 135 6.7e-20 3
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 135 7.3e-20 3
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 135 8.0e-20 3
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 135 8.0e-20 3
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 135 8.0e-20 3
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 135 8.0e-20 3
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 135 1.0e-19 3
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 131 3.7e-19 4
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 140 8.1e-19 3
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 141 1.3e-18 3
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 145 1.6e-15 2
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 156 2.0e-15 2
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 142 6.8e-14 2
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 130 8.0e-14 2
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 136 8.3e-14 2
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 134 1.1e-13 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 130 3.0e-13 2
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 129 4.7e-13 2
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 125 5.3e-13 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 126 6.9e-13 2
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 126 6.9e-13 2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 123 9.6e-13 2
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 123 1.5e-12 2
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 148 1.8e-12 2
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 148 1.9e-12 2
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 128 2.1e-12 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 125 2.5e-12 2
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 127 1.1e-11 2
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 121 1.4e-11 3
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 116 2.8e-11 2
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 133 8.0e-11 2
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 123 1.3e-10 2
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 136 4.8e-10 2
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 229/386 (59%), Positives = 308/386 (79%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R I K R
Sbjct: 61 VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RAE+ AE+R++D+L+P + + T+ + RQ FRK+LREG LD+KEIEI+L
Sbjct: 121 YRAEELAEERILDVLIPPAKNNWGQTEQQQEPS--AARQAFRKKLREGQLDDKEIEIDLA 178
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDE 261
+EIM+PPGMEEMT+Q+++MF +G ++K RK+KI++A+KLLI+EEA KL+N +E
Sbjct: 179 AAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEE 238
Query: 262 IQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 321
++Q AI+ VEQ+GI+F+DEIDKI R +++ D+SR GVQRDLLPLVEG TV+TK+G++
Sbjct: 239 LKQDAIDAVEQHGIVFIDEIDKICKRG-ESSGPDVSREGVQRDLLPLVEGCTVSTKHGMV 297
Query: 322 KTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEA 381
KTDHILFIASGAF +AKPSDLIPELQGR PIRVEL +L+ SDF RI+T N +T QY+A
Sbjct: 298 KTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKA 357
Query: 382 LLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS--- 438
L+ATEG+ IEF D GI+R+AE A+ +NE TENIGARRL+T +E+L+EE+S++++++S
Sbjct: 358 LMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQN 417
Query: 439 LLVDADYVNSRLGDLSINEDLSRYVL 464
+ +DADYV+ L L +EDLSR++L
Sbjct: 418 ITIDADYVSKHLDALVADEDLSRFIL 443
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 231/386 (59%), Positives = 307/386 (79%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+NAPFIK+EATKFTEVGYVG++V+ IIRDL DI+IK TRE ++ K R
Sbjct: 61 VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDLTDIAIKLTREQQMGKCR 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RAE+ AE+R++D L+P K K+ D+ +TRQIFRK+LRE LD+KEI+I++
Sbjct: 121 QRAEEHAEERILDALLP-KPKN----DWDDSDSNSNTRQIFRKKLRESQLDDKEIDIDVA 175
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDE 261
+EIMSPPGMEEMT Q++++F +G K RK+KI+EA KLLI+EEA KL+N+++
Sbjct: 176 QPQIGIEIMSPPGMEEMTNQLQSLFKNMGQAPAKRRKMKIKEAFKLLIEEEAAKLVNQED 235
Query: 262 IQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 321
++++AI VEQNGI+FLDEIDKI R + + D+SR GVQRDLLPLVEG TV TK+G++
Sbjct: 236 LKEQAIELVEQNGIVFLDEIDKICKRG-ETSGPDVSREGVQRDLLPLVEGCTVTTKHGMV 294
Query: 322 KTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEA 381
KTDHILFIASGAF ++KPSDLIPELQGR PIRVELD+L+ DF RI+T + LT+QY A
Sbjct: 295 KTDHILFIASGAFQMSKPSDLIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIA 354
Query: 382 LLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNN---IS 438
L+ATEG+ IEF + GI+ +A+ A+ +NERTENIGARRL+T MEKL+E++S+ +++ S
Sbjct: 355 LMATEGVIIEFTESGIESIAKAAWQVNERTENIGARRLHTVMEKLMEDISYEASDKSGSS 414
Query: 439 LLVDADYVNSRLGDLSINEDLSRYVL 464
++DADYV++ L +L +EDLSR++L
Sbjct: 415 FVIDADYVSAHLDNLVQDEDLSRFIL 440
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 227/388 (58%), Positives = 310/388 (79%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+NAPFIK+EATKFTEVGYVG++VD+IIRDL D ++K R+ EI K R
Sbjct: 61 VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNR 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RAED AE+R++D L+P + N + STRQ FRK+LREG LD+KEIEI+++
Sbjct: 121 ARAEDVAEERILDALLPPAK--NQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEIDVS 178
Query: 202 DTGPHM--EIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNE 259
G M EIM+PPGMEEMT Q++++F +G+ + K RK+KI++A+K LID+EA KL+N
Sbjct: 179 -AGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINP 237
Query: 260 DEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG 319
+E++QKAI+ VEQNGI+F+DEIDKI + + + D+SR GVQRDLLPLVEG+TV+TK+G
Sbjct: 238 EELKQKAIDAVEQNGIVFIDEIDKIC-KKGEYSGADVSREGVQRDLLPLVEGSTVSTKHG 296
Query: 320 IIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQY 379
++KTDHILFIASGAF +A+PSDLIPELQGR PIRVEL +LS +DF RI+T + LT+QY
Sbjct: 297 MVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQY 356
Query: 380 EALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS- 438
+AL+ATEG+ I F D ++++AE A+ +NE+TENIGARRL+T ME+L++++SF++++++
Sbjct: 357 KALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNG 416
Query: 439 --LLVDADYVNSRLGDLSINEDLSRYVL 464
+ +DA YV LG++ NEDLSR++L
Sbjct: 417 QTVNIDAAYVADALGEVVENEDLSRFIL 444
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 226/390 (57%), Positives = 300/390 (76%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRL+ L+ APF+KIEATKFTEVGYVGRDV++IIRDL+D+++K TRE I +V+
Sbjct: 60 VGKTEIARRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLVDVAVKMTREKAIRQVK 119
Query: 142 TRAEDAAEDRVIDILVPSK----EKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIE 197
+ AE+AAE+RV+D L+P + + +TRQ+FRK+LR G LD+KEIE
Sbjct: 120 SLAEEAAEERVLDALIPPARGGFQGEPTAEEKPTEKKESATRQLFRKKLRNGELDDKEIE 179
Query: 198 IELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLL 257
+E++ P EIM PPGMEEM +Q++ + S + + R K+R++K+++A+++L +EEA KL+
Sbjct: 180 VEVS-AHPSFEIMGPPGMEEMVSQLQGIMSSMSSRRSKSRRLKVKDALRILGEEEAAKLV 238
Query: 258 NEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 317
+ED+I+ A+ +VEQNGI+F+DEIDKI R D+SR GVQRDLLPLVEG+TV TK
Sbjct: 239 DEDQIKSTALASVEQNGIVFIDEIDKIVKREGAVG-ADVSREGVQRDLLPLVEGSTVFTK 297
Query: 318 YGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTK 377
YG++KTDHILFIASGAFH+AKPSDL+PELQGRFPIRVEL +L+ DF RI+T LT+
Sbjct: 298 YGMVKTDHILFIASGAFHIAKPSDLVPELQGRFPIRVELKALTADDFVRILTEPKASLTE 357
Query: 378 QYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNI 437
QY LL TE + F DGI+RLAEIAY +N+R+ENIGARRL+T ME+LLEEVSF + +
Sbjct: 358 QYTELLKTENFGLSFTKDGIKRLAEIAYQVNDRSENIGARRLHTIMERLLEEVSFEATDK 417
Query: 438 ---SLLVDADYVNSRLGDLSINEDLSRYVL 464
S+ +DADYVN +L L+ +EDLSRY+L
Sbjct: 418 QGESITIDADYVNKQLKKLAEDEDLSRYIL 447
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 222/386 (57%), Positives = 302/386 (78%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL++APFIK+EATKFTEVGYVG++V+TIIRDL D++IK +E E+++V+
Sbjct: 61 VGKTEIARRLAKLAHAPFIKVEATKFTEVGYVGKEVETIIRDLADMAIKMVKESEMDRVK 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
AE+AAE+R++D+L+P + D +TRQIFRK+LREG LD+KEIE++L
Sbjct: 121 HLAEEAAEERILDVLLPPA-RDGFGNDEKSDDS--NTRQIFRKKLREGKLDDKEIELDLA 177
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDE 261
+EIM+PPGME+MT+Q++ MF + + + RK+KI++A+K L +EEA K++N+D+
Sbjct: 178 APQVGVEIMAPPGMEDMTSQLQNMFQNMSSEKTNKRKLKIKDALKALQEEEAAKIVNQDD 237
Query: 262 IQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 321
I+QKAI+ VEQNGI+F+DEIDKI R+ + D+SR GVQRDLLPLVEG+TV+TK+G+I
Sbjct: 238 IKQKAIDAVEQNGIVFIDEIDKICKRADSSGGGDVSREGVQRDLLPLVEGSTVSTKHGMI 297
Query: 322 KTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEA 381
KTDHILFIASGAF + KPSDLIPELQGR PIRVEL +L+ DF RI+T LT+QY A
Sbjct: 298 KTDHILFIASGAFQMTKPSDLIPELQGRLPIRVELQALTADDFVRILTEPFASLTEQYIA 357
Query: 382 LLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS--- 438
LLATEG+ + F DDGI+ +A+ A+ +NE TENIGARRL+T ME+L+E++SFN++ S
Sbjct: 358 LLATEGVSVTFTDDGIKAIADSAWQVNETTENIGARRLHTMMERLVEDLSFNADQRSGET 417
Query: 439 LLVDADYVNSRLGDLSINEDLSRYVL 464
+ +D YV L ++ +EDLSR++L
Sbjct: 418 ISIDQAYVTKILSEVVKDEDLSRFIL 443
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 215/386 (55%), Positives = 302/386 (78%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+
Sbjct: 61 VGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVK 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RAE+ AE+RV+D L+P + + STRQ+FRK+LREG L++KEIEI +
Sbjct: 121 FRAEELAEERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVA 178
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDE 261
+EIM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E
Sbjct: 179 VPQMGVEIMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEE 238
Query: 262 IQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 321
++++AI NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G++
Sbjct: 239 LKEQAIYNVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMV 297
Query: 322 KTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEA 381
+TDHILFIASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY A
Sbjct: 298 RTDHILFIASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVA 357
Query: 382 LLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS--- 438
L+ TE + ++F +DGI+++A+ A+ +NE TENIGARRL+T +E+L++E+SF++ +
Sbjct: 358 LMKTEQVDVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLERLMDEISFDATEKAGQA 417
Query: 439 LLVDADYVNSRLGDLSINEDLSRYVL 464
++DA YV +RLG+L +EDLSR++L
Sbjct: 418 FVIDAAYVKARLGELVEDEDLSRFIL 443
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 215/386 (55%), Positives = 302/386 (78%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+N PFIK+EATKFTEVGYVG++V++IIRDL D+++K T + + KV+
Sbjct: 61 VGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTDVAVKLTHQQAMEKVK 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RAE+ AE+RV+D L+P + + STRQ+FRK+LREG L++KEIEI +
Sbjct: 121 FRAEELAEERVLDALLPPPRDAWGQAEQKEENS--STRQVFRKKLREGQLNDKEIEINVA 178
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDE 261
+EIM+PPGMEEMT Q++ +F + KK RK+KI++A+K L++EEA KL+N++E
Sbjct: 179 VPQMGVEIMAPPGMEEMTNQLQGLFQNLAGDTKKKRKMKIKDALKALVEEEAAKLVNQEE 238
Query: 262 IQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGII 321
++++AI NVE NGI+F+DEIDKI R + + D+SR GVQRDLLPL+EG+TV+TK+G++
Sbjct: 239 LKEQAIYNVENNGIVFIDEIDKICKRG-EVSGPDVSREGVQRDLLPLIEGSTVSTKHGMV 297
Query: 322 KTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEA 381
+TDHILFIASGAF +AKPSDLIPELQGR PIRVEL++LS +DF RI+T LT+QY A
Sbjct: 298 RTDHILFIASGAFQVAKPSDLIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVA 357
Query: 382 LLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS--- 438
L+ TE + ++F +DGI+++A+ A+ +NE TENIGARRL+T +E+L++E+SF++ +
Sbjct: 358 LMKTEQVDVQFTEDGIKQIADAAWQVNETTENIGARRLHTVLERLMDEISFDATEKAGQA 417
Query: 439 LLVDADYVNSRLGDLSINEDLSRYVL 464
++DA YV +RLG+L +EDLSR++L
Sbjct: 418 FVIDAAYVKARLGELVEDEDLSRFIL 443
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 207/389 (53%), Positives = 270/389 (69%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEI+RRLAKL+ APFIK+EATKFTEVGYVGRDV+ IIRDL D +I QTR++ ++VR
Sbjct: 61 VGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLADAAIVQTRDYMRDEVR 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
RA AAEDRVI + + TR++FRK+L+ G LD+ IE+E+
Sbjct: 121 ARAHKAAEDRVITAIAGEDAREG-------------TREMFRKKLKSGELDDTVIELEVA 167
Query: 202 DTG---PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLN 258
D P EI PG + +F R +K+++ ++ ++LI EEA+KLL+
Sbjct: 168 DGANPMPMFEIPGQPGGNMGMMNLGDLFGKAFAGRTTRKKLRVADSYEILIGEEADKLLD 227
Query: 259 EDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ + + A+ VEQNGI+FLDEIDK+ RS D+SR GVQRDLLPL+EGTTV+TKY
Sbjct: 228 DELVNKTALEAVEQNGIVFLDEIDKVCARSDARG-ADVSREGVQRDLLPLIEGTTVSTKY 286
Query: 319 GIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQ 378
G IKTDHILFIASGAFH+AKPSDL+PELQGR PIRVEL +L+ DF RI+T T+ LT Q
Sbjct: 287 GPIKTDHILFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQ 346
Query: 379 YEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS 438
Y AL+ TE + + F DGI LA IA +N+ ENIGARRLYT ME++ EE+SF + + S
Sbjct: 347 YTALMGTENVAVTFTPDGIAALAHIAAEVNQSVENIGARRLYTVMERVFEELSFTAPDRS 406
Query: 439 ---LLVDADYVNSRLGDLSINEDLSRYVL 464
+ VDA +V++ LG+L+ + DLSRYVL
Sbjct: 407 GEAVTVDAGFVDTNLGELTRSTDLSRYVL 435
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 192/402 (47%), Positives = 284/402 (70%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL APF+K+EATKFTEVGYVGRDV+ +IRDL++ S++ RE +I V
Sbjct: 61 VGKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRDLVETSLRMVREEKIKMVE 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXIST---------------RQIFRKRL 186
+A + A +R+ +I++P+ +K N+ F I R+ + ++
Sbjct: 121 DKAYNLAVERLSEIMIPNPKKENIKNPFEMFFGGIREDAAKTDPAYDELNYRRRELQDKI 180
Query: 187 REGALDNKEIEIELNDTG-PHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAI 245
++G LDN+ +EIE+ + P +E+ G+EEM + + + R+K R++ ++EA+
Sbjct: 181 KKGFLDNEMVEIEVEEQKTPMVEVFGVGGIEEMGLNFQDILGGLIPPRRKKRRVTVKEAL 240
Query: 246 KLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDL 305
K+L +EA KL++ DE+Q++AI E++GI+FLDEIDKI + + + D+SR GVQRD+
Sbjct: 241 KILTQQEAQKLIDMDEVQREAIKRAEEDGIVFLDEIDKIAS-TGNTHGPDVSRGGVQRDI 299
Query: 306 LPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFT 365
LP+VEG+TV TKYG +KTDHILFIA+GAFH++KPSDLIPELQGRFPIRVEL SL++ DF
Sbjct: 300 LPIVEGSTVLTKYGPVKTDHILFIAAGAFHMSKPSDLIPELQGRFPIRVELKSLTVEDFK 359
Query: 366 RIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEK 425
+I+T LTKQY LLATEG+ ++F +D ++ +A++AY +NER ENIGARRL T +EK
Sbjct: 360 KILTVPENALTKQYVELLATEGVNLKFTEDSLEEIAKMAYTVNERNENIGARRLITILEK 419
Query: 426 LLEEVSFNSNNI---SLLVDADYVNSRLGDLSINEDLSRYVL 464
+LE++SFN+ + ++++D +V +L ++ + DLSRY+L
Sbjct: 420 VLEDLSFNAPEMWGQTVVIDRKFVQDKLSEIVHDSDLSRYIL 461
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 211/469 (44%), Positives = 301/469 (64%)
Query: 10 IGVKAVKIGTNACENAPSAN-NLRNKFGIRKAILKASVYIDAPNT-RANNISR--NNPVI 65
+G A I +A AP A + ++F + + + K + I N R NNI + ++ +I
Sbjct: 13 VGQDAEHILEDAYSAAPKALVSYLDRFVVGQKLAKKKIAIAIRNRWRRNNIPKPLHDEII 72
Query: 66 RENNVILDMVIKVLLLVGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
+N +++ VGKTEIARR+AKLS APFIK+EATKFTEVGYVGRDV++IIRDL+
Sbjct: 73 PKNILMIGPTG-----VGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLV 127
Query: 126 DISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXI-STRQIFRK 184
D ++ Q ++ + + AE++A+++++D LV K D D R +F K
Sbjct: 128 DSAVAQVKDQKRKQFSKEAEESAKEKILDALVGKKNTE--DDDLADGEDEKHDARAVFEK 185
Query: 185 RLREGALDNKEIEIELNDTG----PHMEIMSPPGMEEMTAQIKTMFS-VIGNHRK-KTRK 238
+L EG LD+ EIEI + + P M++ PG + I M S V G ++K K ++
Sbjct: 186 KLDEGKLDDAEIEINVRELPQNVFPTMDVPGMPGTQIGMMNIGDMMSKVFGANKKFKRKR 245
Query: 239 IKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISR 298
+K+++A K+L D E L +ED I ++A++ V G++F+DEIDKI R+ +++R
Sbjct: 246 VKVKDARKILADAEVEDLFDEDAIIKEALDLVTNRGMVFIDEIDKICARTEVRG--EVNR 303
Query: 299 AGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDS 358
GVQRDLLPL+EGTTV TKYG++KTDHILF+ SGAFH AKPSDL+PELQGR PIRVELDS
Sbjct: 304 EGVQRDLLPLLEGTTVVTKYGVVKTDHILFVGSGAFHFAKPSDLLPELQGRLPIRVELDS 363
Query: 359 LSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARR 418
L + D RI+T T L KQY ALL TEG+ +EF DG++ +AE A +N ENIGARR
Sbjct: 364 LDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKDGVRAIAEAAITVNNEVENIGARR 423
Query: 419 LYTAMEKLLEEVSFNSN-NI--SLLVDADYVNSRLGDLSINEDLSRYVL 464
L+T ME LLEE++F +N N+ + +D +YV+ L + DLS+++L
Sbjct: 424 LHTIMETLLEEINFEANDNVGKTFSIDREYVDKHLQTIIKKLDLSKFIL 472
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 202/441 (45%), Positives = 292/441 (66%)
Query: 33 NKFGIRKAILKASVYIDAPNT-RANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRL 91
++F I +A K +V I N R N + P +RE + ++++ +GKTEIARRL
Sbjct: 65 DRFIIGQADAKRAVAIALRNRWRRNRVPE--P-LREEIIPKNILMIGHTGIGKTEIARRL 121
Query: 92 AKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDR 151
AKL+ APFIK+EATKFTE+GYVGRDVD+IIRDL+D++I +E V T+A+ AE+
Sbjct: 122 AKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDVAINLEKEKSRKFVETKAKSLAENI 181
Query: 152 VIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTG---PHME 208
+++ LV + T+ IF+++LR G +N EI I + ++ P ++
Sbjct: 182 ILEALVGADASQE-------------TKTIFQEKLRNGEFENFEISISIKESKNAIPSID 228
Query: 209 IMSPPGMEEMTAQI-KTMFSVIGNHRK-KTRKIKIREAIKLLIDEEANKLLNEDEIQQKA 266
I + PG + I + + ++GN+++ KT K+ ++EA +LLI+EE+ KL++ED+I + A
Sbjct: 229 IPNIPGNQVGIMNINEIVHKMLGNNKQLKTIKVTVKEARELLINEESEKLMDEDKIIKDA 288
Query: 267 INNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHI 326
+ +GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V TKYG I TDHI
Sbjct: 289 LLLASNDGIVFLDEIDKIAARTEIRG--EVNREGVQRDLLPLLEGTSVTTKYGTITTDHI 346
Query: 327 LFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATE 386
LFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L KQY AL+ TE
Sbjct: 347 LFIASGAFHLAKPSDLLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLKQYCALMKTE 406
Query: 387 GIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS---LLVDA 443
I I+F D+G+ +AEIA +N ENIGARRL+T +EKL+E++S+ + S ++D+
Sbjct: 407 NITIDFTDEGVSTIAEIASTVNREVENIGARRLHTILEKLMEDISYTATENSGRTYVIDS 466
Query: 444 DYVNSRLGDLSINEDLSRYVL 464
+YV +L D++ DLS+++L
Sbjct: 467 EYVKKKLEDIAKQLDLSKFIL 487
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 190/392 (48%), Positives = 258/392 (65%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTEIARRLAKL+ APFIK+EATKFTE+GYVGRDVD+I+RDL+D ++ +E VR
Sbjct: 61 VGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRDLVDRAVLLVKEKYRKVVR 120
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
+A +AED +++ LV + T+ FR +LR G +N EI I +
Sbjct: 121 KQARKSAEDIILNCLVGADASEE-------------TKNAFRHKLRAGEYENSEISINVK 167
Query: 202 DTG----PHMEIMSPPGMEEMTAQIKTMFSVI--GNHRKKTRKIKIREAIKLLIDEEANK 255
D P ++ PG + I + + GN +T ++EA ++L+DEE K
Sbjct: 168 DNRKSMPPSFDVPGMPGGQVGIMNINEIVQKVLGGNKLSRTISTTVKEAREILLDEETEK 227
Query: 256 LLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVN 315
L++ED+I ++A++ GI+FLDEIDKI R+ +++R GVQRDLLPL+EGT+V+
Sbjct: 228 LIDEDKIVREALHIASNEGIVFLDEIDKIAARTEVRG--EVNREGVQRDLLPLLEGTSVS 285
Query: 316 TKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCL 375
TKYG + TDH+LFIASGAFHLAKPSDL+PELQGR PIRVEL LS D RI+T L
Sbjct: 286 TKYGTVTTDHVLFIASGAFHLAKPSDLLPELQGRLPIRVELQPLSRDDLVRILTEPEANL 345
Query: 376 TKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSN 435
KQY ALL TEG+ +EF +DGI +AEIA +N ENIGARRL+T MEKL+E++S+N++
Sbjct: 346 LKQYRALLETEGVTVEFTEDGIFAIAEIASTVNREVENIGARRLHTIMEKLMEDISYNAS 405
Query: 436 NIS---LLVDADYVNSRLGDLSINEDLSRYVL 464
S ++D +V RL D+S DLS+++L
Sbjct: 406 ENSGQTFVIDEKHVRERLEDISKQLDLSKFIL 437
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 185/405 (45%), Positives = 262/405 (64%)
Query: 73 DMVIKVLLL-----VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDI 127
D+V K +L+ VGKTEIARRLAK+ PFIKIEA+K+TEVG+VGRDV++++RDL +
Sbjct: 46 DIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDLANA 105
Query: 128 SIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLR 187
++ + + K + + ++ E+++++ L+P K D + R +LR
Sbjct: 106 ALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEK---MRTKLR 162
Query: 188 EGALDNKEIEIELN----DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRK-IKIR 242
G LD IEIE++ DT P++ PP M M +K VIG KK +K +KI+
Sbjct: 163 NGNLDESTIEIEISQNMFDTNPNL----PPEMGAMQDIVK----VIGVGSKKVKKEMKIK 214
Query: 243 EAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQ 302
+A L +E K+L+++ I+ +A+ E GIIF+DEIDKI S +N D S+ GVQ
Sbjct: 215 DAKNALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQ 274
Query: 303 RDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSIS 362
RDLLP+VEG+ V TK G +KTDHILFIA+GAFHL+KPSDLIPELQGRFP+RVELDSL
Sbjct: 275 RDLLPIVEGSNVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK 334
Query: 363 DFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTA 422
I+T L KQY LL TE +++EF D+ I+ +A+IA NE ++IGARRL+T
Sbjct: 335 ALYEILTRPKNSLLKQYSQLLKTENLELEFNDEAIKEIAKIASRANEEMQDIGARRLHTV 394
Query: 423 MEKLLEEVSFNSNNIS---LLVDADYVNSRLGDLSINEDLSRYVL 464
+EKLLE++SF ++ + +VD V +LGD+ N+DL+RY+L
Sbjct: 395 IEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL 439
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 172/388 (44%), Positives = 236/388 (60%)
Query: 82 VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVR 141
VGKTE+ARRLAK+ NAPF+K+EATK+TEVG+ G DVDTIIRDLI+ SI + N +
Sbjct: 325 VGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNIKTKIANSHK 384
Query: 142 TRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELN 201
E E VI L+ L D I+ ++ +K REG LD+ EIEIE++
Sbjct: 385 ASIEADVEKNVISSLI------GLQNDLSA----ITIEELLKK-YREGQLDSVEIEIEVS 433
Query: 202 DTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLN-ED 260
+ G + I + S I K +K+ I EA K + +++ L
Sbjct: 434 S-----DSKGSLG-QAYDENIAKLLSAIDKQPSKIKKVTIAEA-KEIFEKQYRDLYTVSQ 486
Query: 261 EIQQKAINNVEQNGIIFLDEIDKI-TTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYG 319
++ + AI + EQNGI+FLDEIDKI T+R S N D S GVQRDLLP+VEG V+TKYG
Sbjct: 487 DVTKLAIQSAEQNGIVFLDEIDKICTSRESIKNGGDASTDGVQRDLLPIVEGCMVSTKYG 546
Query: 320 IIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQY 379
I T ILFIASGAFH KPSDLI ELQGR PIRVEL L DF +I+T +Q
Sbjct: 547 QIDTSRILFIASGAFHNTKPSDLISELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQ 606
Query: 380 EALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFNSN---N 436
+ALL TE I++EF DD + +A+IA+ N + +N+GARRL+ +E+++E++SFN +
Sbjct: 607 KALLKTEDIQLEFTDDALLEVAKIAFEANAQVQNLGARRLHGIIERIVEDISFNCDIHKG 666
Query: 437 ISLLVDADYVNSRLGDLSINEDLSRYVL 464
++++D + L +L DLS+Y++
Sbjct: 667 KTVVLDTPDIRKHLSELLFKTDLSKYII 694
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 135 (52.6 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L+ L I+T L KQY+ L E +++F DD ++ +A
Sbjct: 300 LIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIA 359
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFN---SNNIS-LLVDADYVNSRLGDLSINE 457
+ A I +T GAR L + ME +L + F+ +N++ ++V+ + V S L I
Sbjct: 360 KRA--IERKT---GARGLRSIMEDILLDTMFDLPSMDNVTKVVVNEEAVTSDAQPLLIYA 414
Query: 458 DLSR 461
D +
Sbjct: 415 DAEK 418
Score = 121 (47.7 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLVEGTTVNT- 316
++ Q + NVE Q GI+++DE+DKIT +S + T D+S GVQ+ LL L+EGT +
Sbjct: 166 KLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP 225
Query: 317 ----------KYGIIKTDHILFIASGAF 334
++ + T +ILFI GAF
Sbjct: 226 PQGGRKHPQQEFLQVDTTNILFICGGAF 253
Score = 109 (43.4 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 128
GKT +A+ LA++ + PF +AT TE GYVG DV+ II L+ S
Sbjct: 126 GKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAS 171
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 135 (52.6 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 466 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 525
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 526 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 571
Score = 127 (49.8 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 312 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 371
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 372 KNSRKLRGETVQVDTTNILFVASGAFN 398
Score = 97 (39.2 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 272 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 314
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 135 (52.6 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 478 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 537
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 538 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 583
Score = 127 (49.8 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 324 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 383
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 384 KNSRKLRGETVQVDTTNILFVASGAFN 410
Score = 97 (39.2 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 284 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 326
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 135 (52.6 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 597
Score = 127 (49.8 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 97 (39.2 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 298 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 135 (52.6 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 597
Score = 127 (49.8 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 97 (39.2 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 298 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 135 (52.6 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 597
Score = 127 (49.8 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 97 (39.2 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 298 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 135 (52.6 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 492 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 551
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 552 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 597
Score = 127 (49.8 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 397
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 398 KNSRKLRGETVQVDTTNILFVASGAFN 424
Score = 97 (39.2 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 298 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 340
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 135 (52.6 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ V L SL +I+T + QY+AL + + ++ +D ++ +A
Sbjct: 493 MIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIA 552
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+A + +T GAR L + MEKLL E F NS+ + + VD + V +
Sbjct: 553 RLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGK 598
Score = 126 (49.4 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 36/87 (41%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 339 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 398
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T ++LF+ASGAF+
Sbjct: 399 KNSRKLRGETVQVDTTNVLFVASGAFN 425
Score = 97 (39.2 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 299 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 341
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 131 (51.2 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 343 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 402
IPEL GR P+ L +LS RI+T L QY L + GI++ F + ++A
Sbjct: 463 IPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGIELRFTTPALHKIAA 522
Query: 403 IAYCINERTENIGARRLYTAMEKLLEEVSFNSNNISL 439
A+ T GAR L T ME +L + F + S+
Sbjct: 523 NAF-----TMGTGARALRTEMETILSDAMFETPGSSV 554
Score = 103 (41.3 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 269 NVEQ--NGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTK 317
+VEQ GII LDEIDKI + ++ D+ +GVQ LL L+EGTTV +
Sbjct: 260 DVEQAERGIIVLDEIDKIAA-AKVSHGRDVGGSGVQESLLKLLEGTTVQVQ 309
Score = 102 (41.0 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 45 SVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLL----VGKTEIARRLAKLSNAPFI 100
++Y + P T+ + + +N I E++ + VLLL VGKT + R LA++ + PF
Sbjct: 171 TIYPNNPPTQPS-YATDNAEIDESSQLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFS 229
Query: 101 KIEATKFTEVGYVGRDVDTIIRDLI 125
+ T FT+ GY+G D + + L+
Sbjct: 230 ISDCTPFTQAGYIGDDAEVCVHRLL 254
Score = 55 (24.4 bits), Expect = 3.7e-19, Sum P(4) = 3.7e-19
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 321 IKTDHILFIASGAF 334
++TD+ILFI SGAF
Sbjct: 355 VRTDNILFICSGAF 368
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 140 (54.3 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 43/98 (43%), Positives = 55/98 (56%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQ---NNNTDISRAGVQR 303
+D KLL E A+ ++E Q GI+FLDE DKI T S + N D+S GVQ+
Sbjct: 240 VDTVIQKLLAE------AMGDIEKCQRGIVFLDEFDKIYTSSDPLHTSGNRDVSGKGVQQ 293
Query: 304 DLLPLVEGTTVNTKYGI-------IKTDHILFIASGAF 334
LL LVEG+ V + + I T +ILFIASGAF
Sbjct: 294 ALLKLVEGSLVKVRDPLAPNSKVTIDTSNILFIASGAF 331
Score = 105 (42.0 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 66 RENNVILDMVIKVLLLV---GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIR 122
+ ++ILD +LL GKT + ++LA++ + P + + T T+ GYVG DVDT+I+
Sbjct: 186 KRQDMILDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYVGDDVDTVIQ 245
Query: 123 DLI 125
L+
Sbjct: 246 KLL 248
Score = 100 (40.3 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPEL GRFP+ V L + ++T L Q + E +++ F I+ +A
Sbjct: 396 MIPELVGRFPVIVPFHCLDKTHLMSVLTEPRGSLIAQTKKFFENENVELRFSPAAIEAIA 455
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF 432
E+A + +T GAR L + +EK + +
Sbjct: 456 EMA--VKRKT---GARALKSIVEKAVMNAKY 481
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 141 (54.7 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 43/101 (42%), Positives = 54/101 (53%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT--DISRAGVQRD 304
+ E+ ++ + + Q A NVE Q GI+FLDE+DKI ++ D+S GVQ
Sbjct: 299 VGEDVESVIQK--LVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHA 356
Query: 305 LLPLVEGTTVNTKYGI-----------IKTDHILFIASGAF 334
LL LVEGT VN K G I T ILFIASGAF
Sbjct: 357 LLKLVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAF 397
Score = 107 (42.7 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
++PEL GRFP+ V S R+MT L Q + + + + F + ++++A
Sbjct: 454 MVPELVGRFPVLVPFHSFDKQMLVRVMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVA 513
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF 432
++A ++ +T GAR L + +E L E F
Sbjct: 514 QLA--LDRKT---GARALRSILEAALLEAKF 539
Score = 97 (39.2 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 66 RENNVILDMVIKVLLL----VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTII 121
+E +V L+ VLL+ VGKT + + LA++ + P + T T+ GYVG DV+++I
Sbjct: 249 KEQSVRLEKS-NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVI 307
Query: 122 RDLI 125
+ L+
Sbjct: 308 QKLV 311
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 145 (56.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPEL GR + L+ L+ D RI+T + KQY+ L A +G+ ++F +D ++ +A
Sbjct: 291 LIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDGVNLKFEEDALRAIA 350
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFNS---NNISLLVDADYVNSRLGDLSINED 458
++A + +T GAR L + +E+++ ++ F N +++ + V L I
Sbjct: 351 QLA--LERKT---GARGLRSIIEEMMVDLMFELPEYKNYDIVITKEVVKDNAKALLIKRK 405
Query: 459 LS 460
+S
Sbjct: 406 IS 407
Score = 124 (48.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 305
+ E+ +L + Q A +V+ Q GI+F+DEIDKI S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILTR--LLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQAL 208
Query: 306 LPLVEGTTVNT--KYGI---------IKTDHILFIASGAF 334
L ++EG+ VN K G I T +ILF+ GAF
Sbjct: 209 LKIIEGSLVNIPPKGGRKHPNQEFIQIDTSNILFVCGGAF 248
Score = 99 (39.9 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTRE---F- 135
GKT +A+ LAK + P +AT TE GYVG DV+ I+ L+ D +++ ++ F
Sbjct: 121 GKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAADGDVQRAQKGIVFI 180
Query: 136 -EINKVRTRAEDAAEDR 151
EI+K+ +E+ + R
Sbjct: 181 DEIDKIARMSENRSITR 197
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 156 (60.0 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 40/108 (37%), Positives = 62/108 (57%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GRFP+ V SL++S RI+T L QY+ALL + + + F +D ++ +A
Sbjct: 527 MIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIA 586
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYV 446
++A ER + GAR L + ME+LL + F S+ + + ADYV
Sbjct: 587 QLAM---ER--HTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYV 629
Score = 118 (46.6 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLL 306
+ E+ ++++ + Q A NVE Q GI+FLDE+DKI + D+ GVQ+ +L
Sbjct: 369 VGEDIESVISK--LLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGML 426
Query: 307 PLVEGTTVNTKY--------GI---IKTDHILFIASGAF 334
++EGT VN G + T +ILF+ASGA+
Sbjct: 427 KMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAY 465
Score = 97 (39.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT IA+ +AK + PF + T T+ GYVG D++++I L+
Sbjct: 339 GKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLL 381
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 142 (55.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR PI V LD+L RI+T L KQY+ L +G+ +EF +D ++ +A
Sbjct: 291 LIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLFELDGVTLEFEEDALRAIA 350
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFN----SNNISLLVDADYVNSR 449
+ A N GAR L +E+++ +V + + I +V D + ++
Sbjct: 351 QKAI-----KRNTGARGLRAILEEVMLDVMYEIPSRKDIIKCIVTRDVIENK 397
Score = 112 (44.5 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF---- 135
GKT +A+ LA+ N PF +AT TE GYVG DV+ I+ LI D I++ +
Sbjct: 117 GKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKLIQNADYDIERAEKGIVYI 176
Query: 136 -EINKVRTRAEDAAEDR 151
EI+K+ ++E+ + R
Sbjct: 177 DEIDKIARKSENPSITR 193
Score = 110 (43.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 305
+ E+ +L + + Q A ++E + GI+++DEIDKI +S + T D+S GVQ+ L
Sbjct: 147 VGEDVENILLK--LIQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQAL 204
Query: 306 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
L ++EGT + ++ I T +ILFI GAF
Sbjct: 205 LKILEGTIASVPPQGGRKHPHQEFIQIDTTNILFIVGGAF 244
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 130 (50.8 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GRFPI V L +L+ R++ L KQY+ L + +K+ F + ++ ++
Sbjct: 501 LIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIIS 560
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF 432
+ A +N GAR L +E +L E F
Sbjct: 561 KQAM-----VKNTGARGLRALLESILTEAMF 586
Score = 130 (50.8 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 54/174 (31%), Positives = 90/174 (51%)
Query: 179 RQIFRKRLREGA----LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 234
++I+ +++G+ +D+ + +EL+ + ++ +M P G + T KT+ ++
Sbjct: 282 KRIYHTSMKKGSAAQPIDDDD-NVELDKS--NVLLMGPTGSGK-TLLAKTLARLVNVPFV 337
Query: 235 KTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINNVEQNGIIFLDEIDKITTRS-SQN 291
+ +A + D E+ +KLL E +A Q GI+++DE+DKIT ++ S N
Sbjct: 338 IADATTLTQAGYVGDDVESILHKLLTVAEFNVQAA----QQGIVYIDEVDKITKKAESLN 393
Query: 292 NNTDISRAGVQRDLLPLVEGTTVNTK-YGIIKT---DHI-------LFIASGAF 334
+ D+S GVQ+ LL L+EGT VN G K DHI LFI GAF
Sbjct: 394 ISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAF 447
Score = 129 (50.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 35/97 (36%), Positives = 54/97 (55%)
Query: 39 KAILKASVYIDAP---NTRANNISRNNPVIRENNVILDMVIKVLLL----VGKTEIARRL 91
K +L +VY +T S P+ ++NV LD VLL+ GKT +A+ L
Sbjct: 270 KKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKS-NVLLMGPTGSGKTLLAKTL 328
Query: 92 AKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 128
A+L N PF+ +AT T+ GYVG DV++I+ L+ ++
Sbjct: 329 ARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVA 365
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 136 (52.9 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 40/123 (32%), Positives = 61/123 (49%)
Query: 311 GTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSISDFTRIMTS 370
G V +K I TDH + L K LIPE GR P+ + +L +I++
Sbjct: 272 GAEVRSKAEIDTTDHFADVMPE--DLIK-FGLIPEFIGRLPVVASVTNLDKESLVKILSE 328
Query: 371 TNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEV 430
L KQY L +G+++EF DD ++ +A+ A I+ T GAR L ME++L V
Sbjct: 329 PKNALVKQYIRLFEMDGVELEFTDDALEAIADQA--IHRGT---GARGLRAIMEEVLLPV 383
Query: 431 SFN 433
++
Sbjct: 384 MYD 386
Score = 118 (46.6 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF---- 135
GKT +A+ LAK+ N PF +AT TE GYVG DV+ I+ LI D +K+
Sbjct: 126 GKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVKRAETGIIYI 185
Query: 136 -EINKVRTRAEDAAEDR 151
E++K+ ++E+ + R
Sbjct: 186 DEVDKIARKSENPSITR 202
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 134 (52.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L L +I++ LTKQY AL EG+++EF +D ++ +A
Sbjct: 301 LIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIA 360
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS----LLVDADYVNSRLGDLSINE 457
A ++ +T GAR L + +E +L + ++ +I +VD VN + I E
Sbjct: 361 HKA--MSRKT---GARGLRSIVEGILLDTMYDIPSIDGVVKAVVDESVVNGESAPILIYE 415
Score = 119 (46.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 305
+ E+ ++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ L
Sbjct: 155 VGEDVENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 212
Query: 306 LPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 334
L L+EGT ++ + T ILFI GAF
Sbjct: 213 LKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 110 (43.8 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF---- 135
GKT +A LA+ N PF +AT TE GYVG DV+ II+ L+ D +++ +
Sbjct: 125 GKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYI 184
Query: 136 -EINKVRTRAEDAAEDR 151
EI+K+ ++++ + R
Sbjct: 185 DEIDKISRKSDNPSITR 201
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 130 (50.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR PI L+ L RI+T L KQY L EG++I+F +D ++ +A
Sbjct: 296 LIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIA 355
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFN 433
+ A I ++T GAR L + +E L ++ ++
Sbjct: 356 KRA--IQQKT---GARGLRSIVEHTLLDLMYD 382
Score = 119 (46.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 249 IDEEANKLLNEDEIQQKAINNVEQ--NGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 305
+ E+ ++ + + QK +VE+ GII++DEIDKI ++ + T D+S GVQ+ L
Sbjct: 150 VGEDVENIIQK--LLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQAL 207
Query: 306 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
L L+EGT + +Y + T +ILFI GAF
Sbjct: 208 LKLIEGTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAF 247
Score = 118 (46.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K +L +VY + N +++ I ++N++L GKT +A+ LAK+ + P
Sbjct: 81 KKVLSVAVY-NHYKRLGNQTKKDSVEISKSNILLIGPTGS----GKTLLAQTLAKILDVP 135
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRT 142
F +AT TE GYVG DV+ II+ L+ Q +++ K +T
Sbjct: 136 FAIADATTLTEAGYVGEDVENIIQKLL-----QKCNYDVEKAKT 174
Score = 41 (19.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 234 KKTRKIKIREAIKLLIDEEANKLLNEDEIQQK 265
K+ RK+ E +++ E+A K + + IQQK
Sbjct: 331 KQYRKLFEFEGVEIDFREDALKAIAKRAIQQK 362
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 129 (50.5 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 55/165 (33%), Positives = 85/165 (51%)
Query: 184 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 243
KRLR + + E+EI ++ + ++ P G + T +T+ V+ + E
Sbjct: 90 KRLRNSGVIS-EVEISKSN----VLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTE 143
Query: 244 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 300
A + D E N LL ++ Q A NVE Q GII++DE+DKI+ +S + T D+S G
Sbjct: 144 AGYVGEDVE-NILL---KLLQAANFNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEG 199
Query: 301 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
VQ+ LL ++EGT + ++ I TD+ILFI GAF
Sbjct: 200 VQQALLKVIEGTVSSVPPQGGRKHPHQEFIQISTDNILFIFGGAF 244
Score = 118 (46.6 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 337 AKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIE 391
A+P DL IPE GR P+ L L + R++ L KQY L + ++++
Sbjct: 280 AEPEDLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFEMDNLELK 339
Query: 392 FVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFN 433
F DD + +A A +R N GAR L ME LL + F+
Sbjct: 340 FDDDALMAIARKAV---DR--NTGARGLRAIMESLLLDFMFD 376
Score = 113 (44.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 60 RNNPVIRENNVILDMVIKVLLL-VGKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVD 118
RN+ VI E + V+ + GKT +AR LA++ PF +AT TE GYVG DV+
Sbjct: 93 RNSGVISEVEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVE 152
Query: 119 TIIRDLI---DISIKQTREF-----EINKVRTRAEDAAEDR 151
I+ L+ + +++ + E++K+ ++E+A+ R
Sbjct: 153 NILLKLLQAANFNVEAAQRGIIYIDEVDKISRKSENASITR 193
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 125 (49.1 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 38/118 (32%), Positives = 57/118 (48%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L+ L + +I+T KQY+ L E I + F +D + ++A
Sbjct: 297 LIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHQVA 356
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFNSNNIS----LLVDADYVNSRLGDLSI 455
+ A I +T GAR L + ME +L E F ++V+A+ V R L I
Sbjct: 357 KKA--IARKT---GARGLRSIMEGILLETMFELPTYEGVEEVVVNAEVVEGRAQPLLI 409
Score = 122 (48.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 37/125 (29%), Positives = 68/125 (54%)
Query: 36 GIRKAILKASVYIDAPNTRANNISRNNPV-IRENNVILDMVIKVLLLVGKTEIARRLAKL 94
G K +L +V+ R N+ S+NN V + ++N++L GKT +A+ LA++
Sbjct: 81 GHAKKVLAVAVHNHYK--RLNHASKNNDVELAKSNILLVGPTGT----GKTLLAQTLARI 134
Query: 95 SNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EINKVRTRAED 146
+ PF +AT TE GYVG DV+ I+ L+ D ++++ + EI+K+ ++++
Sbjct: 135 IDVPFTMADATTLTEAGYVGEDVENIVLKLLQAADYNVERAQRGIVYIDEIDKISRKSDN 194
Query: 147 AAEDR 151
+ R
Sbjct: 195 PSITR 199
Score = 120 (47.3 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 51/165 (30%), Positives = 84/165 (50%)
Query: 184 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 243
KRL + +N ++EL + ++ ++ P G + T +T+ +I + E
Sbjct: 96 KRLNHASKNN---DVELAKS--NILLVGPTGTGK-TLLAQTLARIIDVPFTMADATTLTE 149
Query: 244 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 300
A + D E N +L ++ Q A NVE Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 150 AGYVGEDVE-NIVL---KLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 205
Query: 301 VQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
VQ+ LL ++EGT + ++ + T +ILFI GAF
Sbjct: 206 VQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAF 250
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 126 (49.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNIS-LLVDADYVNSRLGDLSI 455
A + +T GAR L + +E +L E + + +S +++D +N L I
Sbjct: 362 --AKAMKRKT---GARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLI 414
Score = 120 (47.3 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 120 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 176
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 177 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 234
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 235 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 292
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 293 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 115 (45.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K +L +VY R + + + ++N++L GKT +A LA+L + P
Sbjct: 86 KKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGS----GKTLLAETLARLLDVP 141
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EINKVRTRAEDAAED 150
F +AT TE GYVG DV+ II+ L+ D + K R EI+K+ ++E+ +
Sbjct: 142 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSIT 201
Query: 151 R 151
R
Sbjct: 202 R 202
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 126 (49.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L L + +I+ LTKQY AL E + +EF +D ++ +A
Sbjct: 302 LIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIA 361
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNIS-LLVDADYVNSRLGDLSI 455
A + +T GAR L + +E +L E + + +S +++D +N L I
Sbjct: 362 --AKAMKRKT---GARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLI 414
Score = 120 (47.3 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 120 IIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXX---XXXI 176
I + +D+ RE EI V + E AA + P K + +LD D+ +
Sbjct: 37 ICDECVDLCNDIIRE-EIKDVLPKKESAA------LPTPRKIREHLD-DYVIGQEHAKKV 88
Query: 177 STRQIFR--KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRK 234
++ KRLR G D +EL + ++ ++ P G + T +T+ ++
Sbjct: 89 LAVAVYNHYKRLRNG--DTTSEGVELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFT 143
Query: 235 KTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNN 292
+ EA + E+ ++ + + QK +V + GI+++DEIDKI+ +S +
Sbjct: 144 MADATTLTEAG--YVGEDVENIIQK--LLQKCDYDVAKAERGIVYIDEIDKISRKSENPS 199
Query: 293 NT-DISRAGVQRDLLPLVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
T D+S GVQ+ LL L+EGT + ++ + T ILFI GAF
Sbjct: 200 ITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 253
Score = 115 (45.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K +L +VY R + + + ++N++L GKT +A LA+L + P
Sbjct: 86 KKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGS----GKTLLAETLARLLDVP 141
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLI---DISI-KQTREF----EINKVRTRAEDAAED 150
F +AT TE GYVG DV+ II+ L+ D + K R EI+K+ ++E+ +
Sbjct: 142 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKSENPSIT 201
Query: 151 R 151
R
Sbjct: 202 R 202
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 123 (48.4 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 191 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 250
L++K++EI T ++ I+ P G + T KT+ + I EA +
Sbjct: 97 LNSKDVEI----TKSNILIIGPTGCGK-TLFAKTLARFLNVPFAICDATSITEAG--YVG 149
Query: 251 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 307
++ +L + Q A NVE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL
Sbjct: 150 DDVENILRM--LLQSADYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLK 207
Query: 308 LVEGTTV-----------NTKYGIIKTDHILFIASGAF 334
++EGT N + I T +ILFI GAF
Sbjct: 208 IMEGTIASVPPQGGRKHPNQETIQIDTTNILFICGGAF 245
Score = 121 (47.7 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
+IPE GR P+ LD L+ + I++ L KQY L + I++ F D+ ++ +A
Sbjct: 290 MIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMDNIQLSFSDEALKTVA 349
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF----NSNNISLLVDADYVNSRLGD 452
A I + +GAR L ME +L F N + +L++ D V + + +
Sbjct: 350 RAA--IKRK---VGARGLRAIMESVLRNYMFELPSNKDVKTLIITEDIVRAEMAN 399
Score = 113 (44.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K IL +VY N ++ + I ++N+++ GKT A+ LA+ N P
Sbjct: 78 KKILSVAVYNHYKCFVGNRLNSKDVEITKSNILIIGPTGC----GKTLFAKTLARFLNVP 133
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLI 125
F +AT TE GYVG DV+ I+R L+
Sbjct: 134 FAICDATSITEAGYVGDDVENILRMLL 160
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 123 (48.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L+ LS +I+ LTKQY+AL EG+ +EF D+ + +A
Sbjct: 300 LIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIA 359
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFN 433
+ A +T GAR L + +E L + ++
Sbjct: 360 KKAMA--RKT---GARGLRSIVEAALLDTMYD 386
Score = 120 (47.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 48/165 (29%), Positives = 80/165 (48%)
Query: 184 KRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIRE 243
KRLR G N +EL + ++ ++ P G + T +T+ ++ + E
Sbjct: 97 KRLRNGDTSNG---VELGKS--NILLIGPTGSGK-TLLAETLARLLDVPFTMADATTLTE 150
Query: 244 AIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAG 300
A + E+ ++ + + QK +V+ Q GI+++DEIDKI+ +S + T D+S G
Sbjct: 151 AG--YVGEDVENIIQK--LLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEG 206
Query: 301 VQRDLLPLVEGTTV-----------NTKYGIIKTDHILFIASGAF 334
VQ+ LL L+EGT ++ + T ILFI GAF
Sbjct: 207 VQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAF 251
Score = 115 (45.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K +L +VY R N + N + ++N++L GKT +A LA+L + P
Sbjct: 85 KKVLAVAVYNHYKRLR-NGDTSNGVELGKSNILLIGPTGS----GKTLLAETLARLLDVP 139
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EINKVRTRAEDAAED 150
F +AT TE GYVG DV+ II+ L+ D +++ + EI+K+ ++++ +
Sbjct: 140 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSIT 199
Query: 151 R 151
R
Sbjct: 200 R 200
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 191 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHR-KKTRKIKIREAIKLL 248
L N I E+ + PH E + P E+ + VIG + KK + + K L
Sbjct: 43 LCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDY--VIGQEQAKKVLAVAVYNHYKRL 99
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 148 (57.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 63/232 (27%), Positives = 103/232 (44%)
Query: 229 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 281
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 359 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 418
Query: 282 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 340
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 419 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 474
Query: 341 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 400
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 475 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 534
Query: 401 AEIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
A +A + +T GAR L + MEKLL E F NS+ + + VD D V +
Sbjct: 535 ARLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGK 581
Score = 127 (49.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 322 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 381
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 382 KNSRKLRGETVQVDTTNILFVASGAFN 408
Score = 97 (39.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 282 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 324
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 148 (57.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 63/232 (27%), Positives = 103/232 (44%)
Query: 229 IGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINN--VEQNGIIFLDEI----- 281
+G + +K+ E + + E+ ++ L + +Q N V LD I
Sbjct: 372 VGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIISRRK 431
Query: 282 -DKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 340
+K + +N RA DL + G + NT I + D +L A L +
Sbjct: 432 NEKYLGFGTPSNMGKGRRAAAAADLAN-ISGES-NTHEDIEEKDRLLRHVE-ARDLIE-F 487
Query: 341 DLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRL 400
+IPE GR P+ V L SL RI+T + QY+AL + + ++ +D ++ +
Sbjct: 488 GMIPEFVGRLPVVVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAI 547
Query: 401 AEIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
A +A + +T GAR L + MEKLL E F NS+ + + VD D V +
Sbjct: 548 ARLA--LERKT---GARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGK 594
Score = 127 (49.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 261 EIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKY 318
++ Q A NVE Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN
Sbjct: 335 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPE 394
Query: 319 -------GI---IKTDHILFIASGAFH 335
G + T +ILF+ASGAF+
Sbjct: 395 KNSRKLRGETVQVDTTNILFVASGAFN 421
Score = 97 (39.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 295 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 337
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 128 (50.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 133 REFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALD 192
RE EI+++ + A I+I S ++ + D ++ + KRLR G D
Sbjct: 50 RE-EISEISPKESKEALPSPIEIR-ESLDEYVIGQDHAKKVLAVAVYNHY-KRLRNG--D 104
Query: 193 NKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEE 252
N IEL + ++ ++ P G + T +T+ ++ + EA + E+
Sbjct: 105 NHN-GIELGKS--NILLIGPTGSGK-TLLAQTLARLLDVPFTMADATTLTEAG--YVGED 158
Query: 253 ANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLPLV 309
++ + + QK +VE Q GI+++DEIDKI+ +S + T D+S GVQ+ LL L+
Sbjct: 159 VENIIQK--LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLI 216
Query: 310 EGTTVNT-----------KYGIIKTDHILFIASGAF 334
EGT + ++ + T ILFI GAF
Sbjct: 217 EGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAF 252
Score = 116 (45.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPVIRENNVILDMVIKVLLLVGKTEIARRLAKLSNAP 98
K +L +VY R N + N + ++N++L GKT +A+ LA+L + P
Sbjct: 86 KKVLAVAVYNHYKRLR-NGDNHNGIELGKSNILLIGPTGS----GKTLLAQTLARLLDVP 140
Query: 99 FIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF-----EINKVRTRAEDAAED 150
F +AT TE GYVG DV+ II+ L+ D +++ + EI+K+ ++++ +
Sbjct: 141 FTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSIT 200
Query: 151 R 151
R
Sbjct: 201 R 201
Score = 113 (44.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L L + +I+ LTKQ+ AL E +++EF D + +A
Sbjct: 301 LIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTALFDMENVELEFRSDALHAIA 360
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF---NSNNIS-LLVDADYV 446
A ++ +T GAR L + +E +L + + + N+S ++VD + +
Sbjct: 361 RKA--MDRKT---GARGLRSIVEAVLLDTMYELPSMENVSKIVVDENTI 404
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 125 (49.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 50/158 (31%), Positives = 80/158 (50%)
Query: 191 LDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLID 250
L N + E+ + ++ ++ P G + T +T+ V+ + EA + D
Sbjct: 93 LSNLSVISEVEISKSNVLLIGPTGSGK-TLLARTLARVLQVPFAMADATTLTEAGYVGED 151
Query: 251 EEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLLP 307
E N LL ++ Q A NV+ Q GII++DE+DKI+ +S + T D+S GVQ+ LL
Sbjct: 152 VE-NILL---KLLQAANFNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLK 207
Query: 308 LVEGTTVNT-----------KYGIIKTDHILFIASGAF 334
++EGT + ++ I TD+ILFI GAF
Sbjct: 208 VIEGTVSSVPPQGGRKHPHQEFIQINTDNILFIFGGAF 245
Score = 115 (45.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 31/93 (33%), Positives = 43/93 (46%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L L S RI+ L KQY+ L + I ++F D + +A
Sbjct: 290 LIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFEMDNINLQFDDSALSVIA 349
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSFNS 434
+ A GAR L +E LL ++ F S
Sbjct: 350 KKA-----AVRKTGARGLRAILEALLLDLMFES 377
Score = 110 (43.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 39 KAILKASVYIDAPNTRANNISRNNPV-IRENNVILDMVIKVLLLVGKTEIARRLAKLSNA 97
K +L +VY R +N+S + V I ++NV+L GKT +AR LA++
Sbjct: 79 KKVLSVAVYNHYK--RLSNLSVISEVEISKSNVLLIGPTGS----GKTLLARTLARVLQV 132
Query: 98 PFIKIEATKFTEVGYVGRDVDTIIRDLI 125
PF +AT TE GYVG DV+ I+ L+
Sbjct: 133 PFAMADATTLTEAGYVGEDVENILLKLL 160
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 127 (49.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 329 IASGAFHLAKPSDLI-----PELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALL 383
+AS + SDLI PE GRFP+ V L +L+ + +++T L KQY+ +
Sbjct: 398 VASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMY 457
Query: 384 ATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLL 427
+K+ F + ++ +A A T+N GAR L +E +L
Sbjct: 458 QMNSVKLHFTESALRLIARKAI-----TKNTGARGLRALLESIL 496
Score = 123 (48.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 272 QNGIIFLDEIDKITTRS-SQNNNTDISRAGVQRDLLPLVEGTTVNT-KYGI--------- 320
Q GI+++DE+DKIT ++ S N + D+S GVQ+ LL ++EGT VN + G
Sbjct: 288 QQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNI 347
Query: 321 -IKTDHILFIASGAF-HLAKP-SDLIPELQGRF--PIRVELDSLSISDFTRIMTSTNVCL 375
I T ILFI GAF + K S+ + F P+R + + + T ++N+
Sbjct: 348 QIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGV---TNAAVASNLME 404
Query: 376 TKQYEALLATEGIKIEFV 393
T + L+A G+ EFV
Sbjct: 405 TVESSDLIAY-GLIPEFV 421
Score = 111 (44.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDIS 128
GKT +A+ LA+ N PF+ +AT T+ GYVG DV++I+ L+ ++
Sbjct: 235 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVA 280
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 121 (47.7 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 333 AFHLAKPSDL-----IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEG 387
A L P+DL IPEL GR PI L L D I+ L QYE + G
Sbjct: 341 ALDLTTPTDLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFG 400
Query: 388 IKIEFVDDGIQRLAEIAYCINERTENIGARRLYTAMEKLLEEVSFN--SNNIS-LLVDAD 444
+++ ++++A+ A + E T GAR L ME+LL V+++ +NI+ +L+D
Sbjct: 401 VRLCVTQKALKKVAQFA--LKEGT---GARGLRGIMERLLLNVNYDCPGSNIAYVLIDEA 455
Query: 445 YVNS 448
V+S
Sbjct: 456 TVDS 459
Score = 111 (44.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 52/225 (23%), Positives = 102/225 (45%)
Query: 92 AKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDR 151
++LSN P K KF + VG+++ + ++ +++ IN + + E +
Sbjct: 31 SRLSNIPTPKA-LKKFLDEYIVGQEIG---KKVLSVAV-YNHYLRINDKQKKGELQRQRE 85
Query: 152 VIDILVPSKEKSNLDTDFXXXXXXISTRQIFRKRLREGALDNKEIEIELNDTGPHMEIMS 211
+++ +EK D D ++ +R R+ L +E++ +L + ++ ++
Sbjct: 86 LME-----REKIADDRDEPIFSGNSESKAGWRNLQRQFNLAGREVDEDLELSKSNVLVVG 140
Query: 212 PPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEA--NKLLNEDEIQQKAINN 269
P G + T T+ ++ T ++ +A + D E +LL E +
Sbjct: 141 PSGSGK-TLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLLVNAEFD---VAR 196
Query: 270 VEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTV 314
E+ GII LDEIDK+ ++ D+S GVQ+ LL ++EG V
Sbjct: 197 AEK-GIIVLDEIDKLAKPAASIGTKDVSGEGVQQSLLKIIEGHKV 240
Score = 94 (38.1 bits), Expect = 7.4e-10, Sum P(3) = 7.4e-10
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A LAK+ N P + T+ T+ GY+G DV+ I L+
Sbjct: 145 GKTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLL 187
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 294 TDISRAG-VQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPS 340
T +++AG + D+ +E VN ++ + + + + + LAKP+
Sbjct: 167 TQLTQAGYIGEDVEVCIERLLVNAEFDVARAEKGIIVLDEIDKLAKPA 214
Score = 44 (20.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 312 TTVNTKYGIIKTDHILFIASGAF 334
TT + ++ T +ILF+ GAF
Sbjct: 260 TTKKDEVFVVDTSNILFMIMGAF 282
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 116 (45.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR P+ L+ L I+T L KQ++ LL + +++EF ++G L
Sbjct: 294 LIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEF-EEGA--LI 350
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF 432
EIA ER GAR L + +E L+ EV F
Sbjct: 351 EIAKKAIER--KTGARGLRSIIEGLMLEVMF 379
Score = 115 (45.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF---- 135
GKT +A+ LA++ N PF +AT TE GYVG DV+ I+ LI D +++ +
Sbjct: 121 GKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYI 180
Query: 136 -EINKVRTRAEDAAEDR 151
EI+KV ++E+ + R
Sbjct: 181 DEIDKVARKSENPSITR 197
Score = 113 (44.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 249 IDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDL 305
+ E+ +L + + Q A +VE + GII++DEIDK+ +S + T D+S GVQ+ L
Sbjct: 151 VGEDVENILLK--LIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQAL 208
Query: 306 LPLVEGTTVNT-----------KYGIIKTDHILFIASGAFHLAKP 339
L ++EGT + ++ I T +ILFI GAF +P
Sbjct: 209 LKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEP 253
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 133 (51.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 60/226 (26%), Positives = 103/226 (45%)
Query: 227 SVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVEQNGIIFLDEIDKITT 286
+++ K TRK++ E +++ + N L + A N +++ II + +K
Sbjct: 367 TIVNVPEKNTRKLR-GETVQV---DTTNILF----VASGAFNGLDR--IISRRKNEKYLG 416
Query: 287 RSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDLIPEL 346
+ +N RA DL G V+ I + D +L A L + +IPE
Sbjct: 417 FGTPSNMGKGRRAAAAADLANTTGGE-VDAVAEIEEKDRLLKHVE-ARDLIE-FGMIPEF 473
Query: 347 QGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYC 406
GR P+ V L SL RI+T + QY+AL + + ++ D ++ +A +A
Sbjct: 474 VGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLA-- 531
Query: 407 INERTENIGARRLYTAMEKLLEEVSF---NSNNISLLVDADYVNSR 449
+ +T GAR L + MEKLL + F +S+ +S+ V D V +
Sbjct: 532 LERKT---GARGLRSIMEKLLLDPMFEVPHSDIVSVDVSKDVVQGK 574
Score = 120 (47.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 272 QNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVN-----TKY--GI---I 321
Q GI+FLDE+DKI + + D+ GVQ+ LL L+EGT VN T+ G +
Sbjct: 327 QQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNTRKLRGETVQV 386
Query: 322 KTDHILFIASGAFH 335
T +ILF+ASGAF+
Sbjct: 387 DTTNILFVASGAFN 400
Score = 97 (39.2 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI 125
GKT +A+ LAK + PF + T T+ GYVG D++++I L+
Sbjct: 274 GKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLL 316
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 123 (48.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 41/99 (41%), Positives = 57/99 (57%)
Query: 250 DEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRSSQNNNT-DISRAGVQRDLL 306
++ N +LN + Q A +VE Q GII++DEIDKI +S + T D+S GVQ+ LL
Sbjct: 155 EDVENIILN---LLQAADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALL 211
Query: 307 PLVEGT--TVNTKYG-------IIKTD--HILFIASGAF 334
++EGT +V K G +K D +ILFI GAF
Sbjct: 212 KIIEGTVASVPPKGGRKHPQQEFLKVDTTNILFICGGAF 250
Score = 109 (43.4 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDLI---DISIKQTREF---- 135
GKT +A+ LA++ PF +AT TE GYVG DV+ II +L+ D +++ ++
Sbjct: 123 GKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQAADYDVERAQKGIIYI 182
Query: 136 -EINKVRTRAEDAAEDR 151
EI+K+ +++ + R
Sbjct: 183 DEIDKIARKSDSPSITR 199
Score = 101 (40.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 343 IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAE 402
IPE GR P+ L L + +I+ L KQY+ L E +K++F D + ++
Sbjct: 298 IPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKLFEMEHVKLKFTDGSLVAISR 357
Query: 403 IAYCINERTENIGARR-LYTAMEKLLEEVSFNSNNISLLVDADYVNSRLGDLSINEDLS 460
A + +T G R L AM ++ E+ + ++++ D + ++ + + E+++
Sbjct: 358 EA--LKRKTGARGLRSILENAMLDIMYEIPSQTMVKEVVINEDVIYNKEKPIIVYENVA 414
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 67/241 (27%), Positives = 117/241 (48%)
Query: 179 RQIFRKRLREG-ALDNKEIEIELNDTGPHMEI-------MSPPGMEEMTAQIKTMFSVIG 230
++I+ ++G A ++ I++E +D H+E+ + P G + T KT+ ++
Sbjct: 230 KRIYHASRKKGSASESYNIDME-DDNIDHVELDKSNVLLLGPTGSGK-TLLAKTLARIVN 287
Query: 231 NHRKKTRKIKIREAIKLLIDEEANKLLNEDEIQQKAINNVE--QNGIIFLDEIDKITTRS 288
+ +A + E+ +L + + +A NVE Q GI+++DE+DK+T +S
Sbjct: 288 VPFAIADATSLTQAS--YVGEDVESILYK--LYVEAGCNVEEAQRGIVYIDEVDKMTMKS 343
Query: 289 -SQNNNTDISRAGVQRDLLPLVEGTTVNT---KYGI----------IKTDHILFIASGAF 334
S N D+S GVQ+ LL L+EGT V+ + G+ + T ILFI GAF
Sbjct: 344 HSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAF 403
Query: 335 -HLAKP-SDLIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEF 392
L K S+ + F V + +S S + ++++ + Q E L+A G+ EF
Sbjct: 404 IDLEKTVSERQHDASIGFGASVRTN-MSTSGLSSAAVTSSLLESLQSEDLVAY-GLIPEF 461
Query: 393 V 393
V
Sbjct: 462 V 462
Score = 124 (48.7 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 342 LIPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLA 401
LIPE GR PI V L +L+ +++T L KQY+ L ++++F + + +A
Sbjct: 457 LIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIA 516
Query: 402 EIAYCINERTENIGARRLYTAMEKLLEEVSF 432
A ++N GAR L + +E +L E F
Sbjct: 517 RKAM-----SKNTGARGLRSILESILTEAMF 542
Score = 99 (39.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 83 GKTEIARRLAKLSNAPFIKIEATKFTEVGYVGRDVDTIIRDL 124
GKT +A+ LA++ N PF +AT T+ YVG DV++I+ L
Sbjct: 274 GKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 464 458 0.00095 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 574 (61 KB)
Total size of DFA: 209 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.75u 0.09s 42.84t Elapsed: 00:00:12
Total cpu time: 42.76u 0.09s 42.85t Elapsed: 00:00:12
Start: Thu Aug 15 14:54:12 2013 End: Thu Aug 15 14:54:24 2013