BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2407
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40830|PKSG_BACSU Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase
PksG OS=Bacillus subtilis (strain 168) GN=pksG PE=1 SV=2
Length = 420
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 165/235 (70%), Positives = 205/235 (87%)
Query: 1 MIKVGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAA 60
M+ GIEA+N++GG+ ++DV+ELAKYR LDT RFENLLM++K+V+LPYEDPV+F +NAA
Sbjct: 1 MVSAGIEAMNVFGGTAYLDVMELAKYRHLDTARFENLLMKEKAVALPYEDPVTFGVNAAK 60
Query: 61 PLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAG 120
P+ID LS +K+ IEL+ITCSESGIDFGKS+STYIH YLGLNRNCRLFE+KQACYS TAG
Sbjct: 61 PIIDALSEAEKDRIELLITCSESGIDFGKSLSTYIHEYLGLNRNCRLFEVKQACYSGTAG 120
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
QMA+NFILS+ SPGAKALVIA+DISRF + E + L+ +W++ EPS GAGAVA+L+ +
Sbjct: 121 FQMAVNFILSQTSPGAKALVIASDISRFLIAEGGDALSEDWSYAEPSAGAGAVAVLVGEN 180
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNADLSLLSYLDCCAQSFKEYKKRV 235
PE+FQ D G+NGYY +EVMDTCRPIPDSEAG++DLSL+SYLDCC Q+F EY+KRV
Sbjct: 181 PEVFQIDPGANGYYGYEVMDTCRPIPDSEAGDSDLSLMSYLDCCEQTFLEYQKRV 235
>sp|P54872|HMCSA_DICDI Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum
GN=hgsA PE=1 SV=2
Length = 482
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 20/241 (8%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
+GI I +Y S ++ +L K+ + ++ L + Q +++ ED S ++NA
Sbjct: 7 IGIHGIEVYFPSTYVAQEDLEKFDGVSQGKY-TLGLGQTNMAFCGDREDIYSLSLNAVNN 65
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTA 119
L+D N+D NSI + +E+ ID KS+ T + + N + + ACY T+
Sbjct: 66 LMDKF-NVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTS 124
Query: 120 GLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISD 179
L A+ ++ S G A+V+A DI+ + E P+GGAG VAMLI
Sbjct: 125 ALHNALQWMESSYWDGRNAIVVAGDIAVY-----------EKGPARPTGGAGVVAMLIGP 173
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQY 237
I F+ G G + V D +P DSE D LS+ Y + Y K +
Sbjct: 174 NAPI-TFESGLRGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEK 232
Query: 238 K 238
K
Sbjct: 233 K 233
>sp|P23228|HMCS1_CHICK Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus
GN=HMGCS1 PE=1 SV=1
Length = 522
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYL--GLNRNCRLFELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + N + + ACY TA
Sbjct: 77 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI-SD 179
L AIN+I S G ALV+A DI+ + + P+GGAGAVAML+ S+
Sbjct: 136 LFNAINWIESSSWDGRYALVVAGDIAVYATGNAR-----------PTGGAGAVAMLVGSN 184
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
P IF+ G G + D +P SE D LS+ YL + + Y+ ++
Sbjct: 185 APLIFER--GLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIH 241
>sp|P54839|HMCS_YEAST Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERG13 PE=1 SV=1
Length = 491
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
VGI+ I +Y + ++ EL K+ + ++ + + Q ++S ED S ++ +
Sbjct: 49 VGIKGIQIYIPTQCVNQSELEKFDGVSQGKY-TIGLGQTNMSFVNDREDIYSMSLTVLSK 107
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGL 121
LI + NID N I + +E+ ID KS+ + + G N + + ACY T L
Sbjct: 108 LIKSY-NIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGENTDVEGIDTLNACYGGTNAL 166
Query: 122 QMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-DK 180
++N+I S G A+V+ DI+ + DK P+GGAG VAM I D
Sbjct: 167 FNSLNWIESNAWDGRDAIVVCGDIAIY----DKGAA-------RPTGGAGTVAMWIGPDA 215
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQYK 238
P +F S Y D +P SE D SL Y+ Q +K Y K+ K
Sbjct: 216 PIVFDSVRAS---YMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISK 272
Query: 239 IIV 241
+V
Sbjct: 273 GLV 275
>sp|Q8JZK9|HMCS1_MOUSE Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus
GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q + ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ S + + I + +E+ ID KS+ + + + N + + ACY TA
Sbjct: 77 MERHS-LSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N++ S G ALV+A DI+ + + P+GG GAVA+LI
Sbjct: 136 VFNAVNWVESSSWDGRYALVVAGDIAIYATGNAR-----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APLI-FDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIR 241
>sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens
GN=HMGCS1 PE=1 SV=2
Length = 520
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +N+ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MER-NNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIAVYATGNAR-----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ F+ G G + D +P SE D LS+ YL + + Y K++
Sbjct: 185 APLI-FERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIH 241
>sp|P17425|HMCS1_RAT Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q + ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ + + + N + + ACY TA
Sbjct: 77 MER-NSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIAIYASGNAR-----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APVI-FDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIR 241
>sp|P13704|HMCS1_CRIGR Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus
griseus GN=HMGCS1 PE=3 SV=1
Length = 520
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q + ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQNL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ S + + I + +E+ ID KS+ + + + N + + ACY TA
Sbjct: 77 MERNS-LSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIAIYATGNAR-----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APLI-FDRGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIR 241
>sp|Q86HL5|HMCSB_DICDI Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum
GN=hgsB PE=3 SV=1
Length = 468
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 20/239 (8%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
+GI AI++Y +++ EL KY K+ ++ + + Q ++S ED VS A+ +
Sbjct: 7 IGICAIDIYFPQTYVNQSELKKYDKVSNGKY-TIGLGQTNMSFVGDREDIVSMAMTSVKM 65
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTA 119
++ S ID SI + +E+ ID KS+ + I N L + ACY T
Sbjct: 66 MMSKYS-IDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTN 124
Query: 120 GLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISD 179
L ++ +I S G ALV+ DI+ + P+GGAG V MLI
Sbjct: 125 ALFNSLQWIESSYWDGRYALVVTGDIAVY-----------SKGAARPTGGAGVVTMLIGP 173
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G + V D +P SE D LS+ YL + + EYKK+ +
Sbjct: 174 NATLI-FDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFE 231
>sp|P54868|HMCS2_HUMAN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 24/241 (9%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK----SVSLPYEDPVSFAINAA 59
VGI A+ +Y + ++D +L KY ++ ++ L Q + SV ED S +
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQ---EDINSLCLTVV 110
Query: 60 APLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSC 117
L++ + + +S+ + +E+ ID K++ T + + N + + ACY
Sbjct: 111 QRLMERI-QLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 169
Query: 118 TAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI 177
TA L A N++ S G A+V+ DI+ + + P+GGAGAVAMLI
Sbjct: 170 TASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNAR-----------PTGGAGAVAMLI 218
Query: 178 SDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
K + + G G + V D +P SE D LS+ YL + + Y+K++
Sbjct: 219 GPKAPL-ALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKI 277
Query: 236 Q 236
Q
Sbjct: 278 Q 278
>sp|Q5R7Z9|HMCS1_PONAB Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii
GN=HMGCS1 PE=2 SV=1
Length = 520
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY + ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +N+ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MER-NNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIAVYATGNAR-----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ F+ G G + D +P SE D LS+ YL + + Y K+++
Sbjct: 185 APLI-FERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIR 241
>sp|Q2KIE6|HMCS2_BOVIN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQ-QKSVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D EL K+ K++ R+ L Q Q ED S + L
Sbjct: 54 VGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCLTVVQQL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +S+ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MER-TQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G ALV+ DI+ V N P+GGAGAVAML+ +
Sbjct: 173 LFNAANWMESSSWDGRYALVVCGDIA---VYPSGNA--------RPTGGAGAVAMLVGPE 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + V D +P SE D LS+ YL + + Y+++++
Sbjct: 222 APLV-LERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIE 278
>sp|P54874|HMCS_SCHPO Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hcs1 PE=1 SV=1
Length = 447
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFE-NLLMQQKSVSLPYEDPVSFAINAAAPL 62
+GI+ + LY + +++ L + + T ++ L + + + ED SF + A + L
Sbjct: 8 IGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALSQL 67
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I ID + I + +E+ ID KS+ + + G N N + ACY L
Sbjct: 68 IKRY-QIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGDNHNVEGIDCVNACYGGVNALF 126
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPE 182
I++I S G +V+A DI+ + + P+GGAG VA+L+
Sbjct: 127 NTIDWIESSAWDGRDGIVVAGDIALYAKGNAR-----------PTGGAGCVALLVGPNAP 175
Query: 183 IFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
I F+ G G Y D +P SE D SL Y+ ++ Y R
Sbjct: 176 IV-FEPGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVR 228
>sp|P54961|HMCS1_BLAGE Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica
GN=HMGCS-1 PE=2 SV=1
Length = 453
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 16/239 (6%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ L S ++D ++L Y + ++ L Q + ED S + + L
Sbjct: 6 VGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSRL 65
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
++ S I + I + +E+ +D KS+ T + N + + ACY T+ L
Sbjct: 66 MERWS-IPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKDNTDIEGVDTVNACYGGTSALF 124
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPE 182
AI+++ S G ALV+A DI+ + + P+GGAGAVAML+
Sbjct: 125 NAISWVESSSWDGRYALVVAGDIAVYAKGSAR-----------PTGGAGAVAMLVGANAP 173
Query: 183 IFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQYKI 239
+ FD G + D +P S D LS+ YL ++ Y ++Q ++
Sbjct: 174 LV-FDRGVRSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQL 231
>sp|P54869|HMCS2_MOUSE Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus
GN=Hmgcs2 PE=1 SV=2
Length = 508
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 24/241 (9%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK----SVSLPYEDPVSFAINAA 59
VGI A+ +Y + ++D +L K+ ++ ++ L Q + SV ED S +
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQ---EDINSLCLTVV 110
Query: 60 APLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSC 117
L++ + + +++ + +E+ ID K++ T + + N + + ACY
Sbjct: 111 QRLMER-TKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 169
Query: 118 TAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI 177
TA L A N++ S G ALV+ DI+ + + P+GGAGAVAMLI
Sbjct: 170 TASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNAR-----------PTGGAGAVAMLI 218
Query: 178 SDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
K + + G G + D +P SE D LS+ YL + + Y+K++
Sbjct: 219 GPKAPLV-LEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKI 277
Query: 236 Q 236
Q
Sbjct: 278 Q 278
>sp|P54870|HMCS2_BLAGE Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica
GN=HMGCS-2 PE=2 SV=1
Length = 455
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 104/243 (42%), Gaps = 26/243 (10%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI I + S+++D EL Y ++ ++ L Q K V ED S + A L
Sbjct: 8 VGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVDKL 67
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYL--GLNRNCRLFELKQACYSCTAG 120
++ +NID N I + +E+ +D KS+ T + N + + ACY TA
Sbjct: 68 MER-NNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTAA 126
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A+ +I S G A+V+A DI+ + E P+GGAGA+ MLI
Sbjct: 127 LFNALIWIESSSWDGRYAIVVAADIA-IYAKE-----------CSPTGGAGALLMLIGAN 174
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNADLSL-----LSYLDCCAQSF----KEY 231
I D G + D +P SE D L LS LD C F ++Y
Sbjct: 175 APIV-IDRGVRASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALDHCYPRFCSKTEKY 233
Query: 232 KKR 234
KR
Sbjct: 234 LKR 236
>sp|P22791|HMCS2_RAT Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus
norvegicus GN=Hmgcs2 PE=2 SV=1
Length = 508
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 24/241 (9%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK----SVSLPYEDPVSFAINAA 59
VGI A+ +Y + ++D +L K+ ++ ++ L Q + SV ED S +
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQ---EDINSLCLTVV 110
Query: 60 APLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSC 117
L++ + + +++ + +E+ ID K++ T + + N + + ACY
Sbjct: 111 QRLMER-TKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 169
Query: 118 TAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI 177
TA L A N++ S G ALV+ DI+ + + P+GGAGAVAMLI
Sbjct: 170 TASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPR-----------PTGGAGAVAMLI 218
Query: 178 SDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
K + + G G + D +P SE D LS+ YL + + Y++++
Sbjct: 219 GPKAPLV-LEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKI 277
Query: 236 Q 236
Q
Sbjct: 278 Q 278
>sp|Q7N384|FABH_PHOLL 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fabH PE=3
SV=1
Length = 317
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
+S IDK I+LII + S S + I H LG +N F++ AC L +A
Sbjct: 65 MSGIDKEQIDLIIVATASSTHAFPSSACQIQHMLG-TQNSAAFDISAACSGFVYALSIAD 123
Query: 126 NFILSKVSPGAKALVIATD-ISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
FI + V+ ALVI +D I+R ED+ L + F + GAGA+ + SD+P I
Sbjct: 124 KFIKTGVAK--HALVIGSDSITRTLDPEDRGTLVL---FGD---GAGAMVVGASDEPGIL 175
Query: 185 QFDIGSNGYY 194
+ +NG Y
Sbjct: 176 STHLHANGSY 185
>sp|O02734|HMCS2_PIG Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa
GN=HMGCS2 PE=2 SV=1
Length = 508
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 26/242 (10%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK----SVSLPYEDPVSFAINAA 59
VGI A+ +Y + ++D +L K+ ++ R+ L Q SV ED S +
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQ---EDINSLCLTVV 110
Query: 60 APLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSC 117
L++ + + +S+ + +E+ ID KS+ T + + N + + ACY
Sbjct: 111 QRLMER-TQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGG 169
Query: 118 TAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI 177
TA L A N++ S G A+V+ DI+ + + P+GGAGAVAML+
Sbjct: 170 TASLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSR-----------PTGGAGAVAMLV 218
Query: 178 SDKPEI-FQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
PE + G G + D +P SE D LS+ YL + + Y+++
Sbjct: 219 G--PEAPLALERGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQK 276
Query: 235 VQ 236
++
Sbjct: 277 IE 278
>sp|P54871|HMCS_CAEEL Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans
GN=F25B4.6 PE=2 SV=2
Length = 462
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFE-NLLMQQKSVSLPYEDPVSFAINAAAPL 62
VGI AI LY F+D +L K+ + + ++ L QQ ED VS ++ L
Sbjct: 14 VGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKL 73
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I+ I +SI ++ +E+ ID KS+ T + N + ++K AC+ L
Sbjct: 74 IETYK-ISTDSIGCLVVGTETMIDKSKSVKTALMDLFPGNSDIEGVDIKNACFGGAQALL 132
Query: 123 MAINFILSKVSPGAK-ALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKP 181
AI+++ K A+V+ DI+ + E +GGAGA+A LI
Sbjct: 133 HAIDWVTVNHPLDKKNAIVVVADIAIY-----------EEGPARCTGGAGAIAFLICPDA 181
Query: 182 EI---FQFDIGSNGYYSFEVMDTCRPIP-DSEAGNADLSLLSYLDCCAQSFKEYKKRV 235
I QF + +++ PIP + + LSL SYL+ ++ + +V
Sbjct: 182 SIPIDRQFS-ACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKV 238
>sp|A7MFQ4|FABH_CROS8 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=fabH PE=3 SV=1
Length = 317
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA ID ++ IDK I LII + S S + +
Sbjct: 39 IRERRIAAPGETVATMGYEAALRAID-MAGIDKGQIGLIIVATTSATHAFPSAACQVQGM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGA--KALVIATDI-SRFFVTEDKN 155
LG+ + C F++ AC T L +A ++ S GA ALVI +D+ +R ED+
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKS----GAVNNALVIGSDVLARTLDPEDRG 152
Query: 156 ELTMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS--FEVMDTCRPIPDS 208
+ + F + GAGAV + S++P I + ++G Y + + R PDS
Sbjct: 153 TIIL---FGD---GAGAVVLGASEEPGILSTHLHADGSYGELLTLPNQDRVNPDS 201
>sp|P54873|HMCS_ARATH Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS
PE=1 SV=2
Length = 461
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 49 EDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGL--NRNCR 106
ED +S + NA L + ID N I + SE+ ID KS+ T++ N +
Sbjct: 51 EDVISMSFNAVTSLFEKY-KIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVE 109
Query: 107 LFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEP 166
+ ACY TA L +N++ S G LVI TD + + + P
Sbjct: 110 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPAR-----------P 158
Query: 167 SGGAGAVAMLIS-DKPEIFQ 185
+GGA A+AMLI D P +F+
Sbjct: 159 TGGAAAIAMLIGPDAPIVFE 178
>sp|Q9PMZ6|FABHL_CAMJE Putative 3-oxoacyl-[acyl-carrier-protein] synthase 3
OS=Campylobacter jejuni subsp. jejuni serotype O:2
(strain NCTC 11168) GN=Cj1303 PE=3 SV=1
Length = 353
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Query: 57 NAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYS 116
+AA L+ L NIDKNS++ +I ++S F S + Y+H L L+ F+L QAC
Sbjct: 66 HAANTLLQGL-NIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTVAFDLGQACAG 124
Query: 117 CTAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAML 176
GL +A + I S + G L+ +S+F ++ N P G G A L
Sbjct: 125 YLYGLFVAHSLIQSGL--GKILLICGDTLSKFIHPKNMN--------LAPIFGDGVSATL 174
Query: 177 I--SDKPEIFQFDIGSNGYY 194
I +D E F F++GS+G Y
Sbjct: 175 IEKTDFNEAF-FELGSDGKY 193
>sp|Q6D690|FABH_ERWCT 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fabH PE=3 SV=1
Length = 317
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E+ + AA ++ ++N+D + + L+I + S S + +
Sbjct: 39 IRERRIAAPDENVATMGYRAAQKALE-MANVDASEVGLLIVATTSSSHAFPSSACQVQQL 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATD-ISRFFVTEDKNEL 157
LG+ ++ F+L AC T L +A ++ S ALVI +D +SR ED+ L
Sbjct: 98 LGI-KDTIAFDLAAACAGFTYALSVADQYVKSGAVK--YALVIGSDTLSRTLDPEDRGTL 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYY 194
+ F + GAGAV + S++P I + ++G Y
Sbjct: 155 IL---FGD---GAGAVLLTTSEQPGILSTHLHADGRY 185
>sp|Q8Z7J6|FABH_SALTI 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella typhi
GN=fabH PE=3 SV=1
Length = 317
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVATMGFTAANRAIE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S V ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGVVK--HALVVGSDVLARTCDPGDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS 195
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGRYG 186
>sp|Q46Z05|FABH_CUPPJ 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=fabH PE=3
SV=1
Length = 326
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 48 YEDP----VSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNR 103
+ DP A+ AA I+ + ID+ SI+LI+ + + S + I + LG+N
Sbjct: 51 WADPDVASSDLAVKAAEQAIE-AAGIDRQSIDLILVATSTPDFVFPSTACIIQNKLGINN 109
Query: 104 NCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWA 162
C F+L+ C L A FI S LVI T++ SR D N+ T
Sbjct: 110 QCAAFDLQAVCSGFVYALATADKFIRSGSH--RNVLVIGTEVFSRIL---DFNDRTTCVL 164
Query: 163 FFEPSGGAGAVAMLISDKPEIFQFDIGSNGYY 194
F + GAGAV + SD+P I + S+G +
Sbjct: 165 FGD---GAGAVVLSASDEPGILSTAMHSDGSH 193
>sp|A9MGC9|FABH_SALAR 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fabH PE=3
SV=1
Length = 317
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA ++ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVATMGFTAANRALE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGAVK--HALVVGSDVLARTCDPSDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYY 194
+ F + GAGAV + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAVVLSASEEPGIISTHLHADGRY 185
>sp|A9N5L3|FABH_SALPB 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fabH PE=3 SV=1
Length = 317
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVATMGFTAANRAIE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGAVK--HALVVGSDVLARTCDPGDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS 195
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGRYG 186
>sp|Q57QG4|FABH_SALCH 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella
choleraesuis (strain SC-B67) GN=fabH PE=3 SV=1
Length = 317
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVATMGFTAANRAIE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGAVK--HALVVGSDVLARTCDPGDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS 195
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGRYG 186
>sp|Q669L1|FABH_YERPS 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fabH
PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|Q1CI19|FABH_YERPN 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fabH PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|Q8ZFT7|FABH_YERPE 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia pestis
GN=fabH PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|Q1C6M8|FABH_YERPA 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fabH PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|A7FH25|FABH_YERP3 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fabH PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|O85139|FABH_SALTY 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fabH PE=3 SV=1
Length = 317
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRKRHIAAPNETVATMGFTAANRAIE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGAVK--HALVVGSDVLARTCDPGDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS 195
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGRYG 186
>sp|A4TLS3|FABH_YERPP 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia pestis
(strain Pestoides F) GN=fabH PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 66 LSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAI 125
++ IDK+ I LII + S S + + LG+ ++ F+L AC T L +A
Sbjct: 65 MAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGI-KDAASFDLAAACAGFTYALSVAD 123
Query: 126 NFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIF 184
++ S A+VI +D+ SR ED+ + + F + GAGAV + S++P I
Sbjct: 124 QYVKSGAVK--HAIVIGSDVLSRALDPEDRGTIIL---FGD---GAGAVVLGASEQPGIM 175
Query: 185 QFDIGSNGYYSFEVMDTCRPIPDSE 209
+ ++G Y E++ P PD +
Sbjct: 176 STHLHADGRYG-ELL--ALPYPDRQ 197
>sp|Q5PGU1|FABH_SALPA 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fabH PE=3 SV=1
Length = 317
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPDETVATMGFTAANRAIE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSIADQYVKSGAVK--HALVVGSDVLARTCDPGDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYS 195
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGRYG 186
>sp|A1JN67|FABH_YERE8 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fabH PE=3 SV=1
Length = 321
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNL---SNIDKNSIELIITCSESGIDFGKSMSTYI 95
++++ ++ P E S AA ++ IDK I LII + S S + +
Sbjct: 39 IRERRIAGPDETVASMGFQAAKKALEMAVIDEGIDKKDIGLIIVATTSSSHAFPSSACQV 98
Query: 96 HHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATD-ISRFFVTEDK 154
LG+ + F+L AC T L +A ++ S A+VI +D +SR ED+
Sbjct: 99 QQMLGIE-DAASFDLAAACAGFTYALSVADQYVKSGAVK--HAIVIGSDMLSRALDPEDR 155
Query: 155 NELTMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSE 209
+ + F + GAGAV + S++P I + ++G Y E++ P PD +
Sbjct: 156 GTIIL---FGD---GAGAVVLGASEEPGILSTHLHADGKYG-ELL--ALPYPDRQ 201
>sp|Q9UWU0|Y535_SULSO UPF0219 protein SSO0535 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO0535 PE=3 SV=1
Length = 350
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D ++L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEAVVKSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDTSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNND--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|B3R213|FABH_CUPTR 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=fabH PE=3 SV=1
Length = 326
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 53 SFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQ 112
+ A+ AA I+ + ID+ I+LII + + S + + LG+ +C F+L+
Sbjct: 60 TLAVKAAEQAIE-AAGIDRQDIDLIIVATSTPDFVFPSTACIVQEKLGITNHCPAFDLQA 118
Query: 113 ACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAG 171
C L A FI S LVI T++ SR D N+ T F + GAG
Sbjct: 119 VCSGFVYALATADKFIRSGSH--RNVLVIGTEVFSRIL---DFNDRTTCVLFGD---GAG 170
Query: 172 AVAMLISDKPEIFQFDIGSNGYY 194
AV + SD+P I + S+G +
Sbjct: 171 AVVLSASDEPGILSSAMHSDGSH 193
>sp|C3N6F6|Y1703_SULIA UPF0219 protein M1627_1703 OS=Sulfolobus islandicus (strain
M.16.27) GN=M1627_1703 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|C3MWN6|Y1587_SULIM UPF0219 protein M1425_1587 OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=M1425_1587 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|C4KHX1|Y1584_SULIK UPF0219 protein M164_1584 OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=M164_1584 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|B1KU74|FABH_CLOBM 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=fabH PE=3
SV=1
Length = 326
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 49 EDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLG-LNRNCRL 107
E+ + A +A I N +NID N ++LII + + +F S + + +G +N C
Sbjct: 49 ENTIYMATESAKEAIKN-ANIDANDLDLIIVATLTPDNFMPSTACSVQKEIGAINALC-- 105
Query: 108 FELKQACYSCTAGLQMAINFILSKVSPGAKALVI-ATDISRFFVTEDKNELTMEWAFFEP 166
F++ AC GL++A + + K S KAL+I A ++S+ ED+N +
Sbjct: 106 FDISAACSGFIYGLEIACSML--KNSFRNKALIIGAENLSKIVDWEDRNTCVL------F 157
Query: 167 SGGAGAVAMLISDKPEIFQFDIGSNG 192
GAGA + + + I +F GSNG
Sbjct: 158 GDGAGAAILSKTKEEGILEFHSGSNG 183
>sp|A8AHY1|FABH_CITK8 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fabH
PE=3 SV=1
Length = 317
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA ++ ++ IDK+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVATMGYTAANRALE-MAGIDKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ S ALVI +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSVADQYVKSGAVK--YALVIGSDVLARTCDPTDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYY 194
+ F + GAGA + S++P I + ++G Y
Sbjct: 155 II---FGD---GAGAAVLSASEEPGIISTHLHADGSY 185
>sp|C3MQN6|Y1695_SULIL UPF0219 protein LS215_1695 OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=LS215_1695 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|C3NEW4|Y1591_SULIY UPF0219 protein YG5714_1591 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=YG5714_1591 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|C3NGT0|Y1245_SULIN UPF0219 protein YN1551_1245 OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=YN1551_1245 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 18 IDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELI 77
I V ++AK D +L + +KSV ED + A ++ I + +D + I L+
Sbjct: 17 IKVEDIAKMWGYDEGVVRSLGLTEKSVPGHDEDSTTIAWESSINAIKR-AQVDPSKIRLV 75
Query: 78 ITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAK 137
+ SES + K ST + LG+N +++ AC + + GL++A +F+L +
Sbjct: 76 LFGSESKVYAVKPTSTILIDALGINNYSATADMEFACRAASVGLRLASSFVLHNSD--SY 133
Query: 138 ALVIATDISR 147
ALVI D ++
Sbjct: 134 ALVIGADTAQ 143
>sp|A1U0E3|FABH_MARAV 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fabH
PE=3 SV=1
Length = 322
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 35 ENLLMQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTY 94
E ++Q+ ++LP + V A AA I+ + I+ I+LI+ + + S +
Sbjct: 36 ERTGIEQRHIALPGQSTVDLAEQAALNAIE-AAGIEATDIDLIVFATTTPDKVFPSCACI 94
Query: 95 IHHYLGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTED 153
+ LG+ + C F+++ C L A FI + S KALVI ++ SR ED
Sbjct: 95 LQARLGI-QGCPAFDIQAVCSGFVYALATAEKFIRTGSSK--KALVIGAEVFSRILNWED 151
Query: 154 KNELTMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNA 213
+ + F + GAGAV + S++ I + ++G Y + C D +A A
Sbjct: 152 RTTCVL---FGD---GAGAVVLEASEETGILSTHLHADGRYEELLHVPCGIANDFDAVKA 205
Query: 214 DLSLLSYLDCCAQSFKEYKKRVQYKIIV 241
Q+F E K +K+ V
Sbjct: 206 -----------GQAFVEMKGNEVFKVAV 222
>sp|Q8Y0J4|FABH_RALSO 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ralstonia
solanacearum (strain GMI1000) GN=fabH PE=3 SV=1
Length = 326
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 67 SNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQMAIN 126
+ ID+ I+LI+ + + S + + LGL+ +C F+L+ C GL A
Sbjct: 73 AGIDRAEIDLILVATSTPDFVFPSAACLVQQKLGLSNHCAAFDLQAVCSGFVYGLATADK 132
Query: 127 FILSKVSPGAKALVIATDI-SRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPEIFQ 185
FI + ALVI ++ SR D N+ T F + GAGAV + SD+P I
Sbjct: 133 FI--RAGGYRNALVIGAEVFSRIL---DFNDRTTCVLFGD---GAGAVVLQASDEPGILS 184
Query: 186 FDIGSNGYYS 195
+ ++G ++
Sbjct: 185 TALHADGSHA 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,325,978
Number of Sequences: 539616
Number of extensions: 3470698
Number of successful extensions: 7661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 7516
Number of HSP's gapped (non-prelim): 197
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)