Your job contains 1 sequence.
>psy2407
MIKVGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSLPYEDPVSFAINAAA
PLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAG
LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK
PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNADLSLLSYLDCCAQSFKEYKKRVQYKII
VYNKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2407
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q71ZQ5 - symbol:mvaS "Hydroxymethylglutaryl-CoA... 292 8.4e-26 1
DICTYBASE|DDB_G0288461 - symbol:hgsA "hydroxymethylglutar... 197 6.3e-15 1
UNIPROTKB|P23228 - symbol:HMGCS1 "Hydroxymethylglutaryl-C... 185 1.5e-13 1
UNIPROTKB|G4NCU0 - symbol:MGG_01026 "Hydroxymethylglutary... 183 1.9e-13 1
UNIPROTKB|F1N9T0 - symbol:HMGCS1 "Hydroxymethylglutaryl-C... 183 2.4e-13 1
UNIPROTKB|F1NTT0 - symbol:HMGCS1 "Hydroxymethylglutaryl-C... 183 2.5e-13 1
UNIPROTKB|E2QX73 - symbol:HMGCS1 "Uncharacterized protein... 180 5.1e-13 1
UNIPROTKB|F6RJG0 - symbol:HMGCS1 "Uncharacterized protein... 179 1.5e-12 1
UNIPROTKB|Q01581 - symbol:HMGCS1 "Hydroxymethylglutaryl-C... 175 1.2e-11 1
SGD|S000004595 - symbol:ERG13 "3-hydroxy-3-methylglutaryl... 174 1.9e-11 1
MGI|MGI:107592 - symbol:Hmgcs1 "3-hydroxy-3-methylglutary... 174 2.1e-11 1
RGD|70970 - symbol:Hmgcs1 "3-hydroxy-3-methylglutaryl-CoA... 174 2.1e-11 1
DICTYBASE|DDB_G0274871 - symbol:hgsB "hydroxymethylglutar... 171 5.1e-11 1
ASPGD|ASPL0000074231 - symbol:AN4923 species:162425 "Emer... 169 9.4e-11 1
UNIPROTKB|P54868 - symbol:HMGCS2 "Hydroxymethylglutaryl-C... 166 3.0e-10 1
ZFIN|ZDB-GENE-040426-1042 - symbol:hmgcs1 "3-hydroxy-3-me... 166 3.2e-10 1
UNIPROTKB|Q2KIE6 - symbol:HMGCS2 "Hydroxymethylglutaryl-C... 165 4.3e-10 1
CGD|CAL0004537 - symbol:ERG13 species:5476 "Candida albic... 164 4.6e-10 1
UNIPROTKB|Q5A3Z7 - symbol:ERG13 "Putative uncharacterized... 164 4.6e-10 1
UNIPROTKB|F1SMG8 - symbol:HMGCS1 "Uncharacterized protein... 164 6.6e-10 1
UNIPROTKB|E2RAD0 - symbol:HMGCS2 "Uncharacterized protein... 159 2.7e-09 1
MGI|MGI:101939 - symbol:Hmgcs2 "3-hydroxy-3-methylglutary... 156 6.4e-09 1
WB|WBGene00017769 - symbol:hmgs-1 species:6239 "Caenorhab... 154 9.7e-09 1
UNIPROTKB|F1M9Q5 - symbol:Hmgcs2 "Hydroxymethylglutaryl-C... 153 1.3e-08 1
RGD|2804 - symbol:Hmgcs2 "3-hydroxy-3-methylglutaryl-CoA ... 153 1.5e-08 1
POMBASE|SPAC4F8.14c - symbol:hcs1 "3-hydroxy-3-methylglut... 151 2.1e-08 1
UNIPROTKB|E1C9C4 - symbol:E1C9C4 "Uncharacterized protein... 151 2.7e-08 1
UNIPROTKB|O02734 - symbol:HMGCS2 "Hydroxymethylglutaryl-C... 149 4.7e-08 1
FB|FBgn0010611 - symbol:Hmgs "HMG Coenzyme A synthase" sp... 148 5.3e-08 1
TIGR_CMR|CJE_1492 - symbol:CJE_1492 "3-oxoacyl-(acyl-carr... 140 2.9e-07 1
TAIR|locus:2137015 - symbol:HMGS "HYDROXYMETHYLGLUTARYL-C... 137 1.1e-06 1
UNIPROTKB|P0A6R0 - symbol:fabH "FabH" species:83333 "Esch... 120 5.4e-05 1
>UNIPROTKB|Q71ZQ5 [details] [associations]
symbol:mvaS "Hydroxymethylglutaryl-CoA synthase"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=ISS] [GO:0006554 "lysine catabolic process" evidence=ISS]
[GO:0019287 "isopentenyl diphosphate biosynthetic process,
mevalonate pathway" evidence=ISS] InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 GO:GO:0006554 EMBL:AE017262
GenomeReviews:AE017262_GR Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0019287 eggNOG:COG3425 KO:K01641 GO:GO:0004421 OMA:DSVTMAS
RefSeq:YP_014032.1 ProteinModelPortal:Q71ZQ5 SMR:Q71ZQ5
STRING:Q71ZQ5 GeneID:2798767 KEGG:lmf:LMOf2365_1434 PATRIC:20324107
HOGENOM:HOG000012352 ProtClustDB:CLSK564411 InterPro:IPR011554
TIGRFAMs:TIGR01835 Uniprot:Q71ZQ5
Length = 388
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 71/205 (34%), Positives = 113/205 (55%)
Query: 2 IKVGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSLPY-EDPVSFAINAAA 60
+K+GI+ I Y + ++D++ELA+ R +D +F + Q K P +D V+ NAA
Sbjct: 1 MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAAL 60
Query: 61 PLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAG 120
++D D I+L+I +ESGID K+ + YIH LG+ R E+K+ACY TAG
Sbjct: 61 QILDEE---DLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFSRAIEIKEACYGATAG 117
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ +A +++ P +K LVI +DI+R+ + E T GAGAVAM+I+
Sbjct: 118 INLAKDYVAKH--PDSKVLVIGSDIARYGLATG-GEATQ---------GAGAVAMVIAAD 165
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPI 205
P + N +Y+ ++MD RP+
Sbjct: 166 PRCITLE-DDNVFYTEDIMDFWRPV 189
>DICTYBASE|DDB_G0288461 [details] [associations]
symbol:hgsA "hydroxymethylglutaryl-CoA synthase"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016126 "sterol biosynthetic process" evidence=IEA] [GO:0008202
"steroid metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
UniPathway:UPA00058 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 dictyBase:DDB_G0288461
GO:GO:0016126 GenomeReviews:CM000154_GR EMBL:AAFI02000111
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 eggNOG:COG3425
KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND EMBL:L24114
RefSeq:XP_636713.1 ProteinModelPortal:P54872 SMR:P54872
STRING:P54872 PRIDE:P54872 EnsemblProtists:DDB0219924
GeneID:8626645 KEGG:ddi:DDB_G0288461 ProtClustDB:CLSZ2429883
Uniprot:P54872
Length = 482
Score = 197 (74.4 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 69/241 (28%), Positives = 110/241 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
+GI I +Y S ++ +L K+ + ++ L + Q +++ ED S ++NA
Sbjct: 7 IGIHGIEVYFPSTYVAQEDLEKFDGVSQGKY-TLGLGQTNMAFCGDREDIYSLSLNAVNN 65
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTA 119
L+D N+D NSI + +E+ ID KS+ T + + N + + ACY T+
Sbjct: 66 LMDKF-NVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTS 124
Query: 120 GLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISD 179
L A+ ++ S G A+V+A DI+ + +K P+GGAG VAMLI
Sbjct: 125 ALHNALQWMESSYWDGRNAIVVAGDIAVY----EKGPA-------RPTGGAGVVAMLIGP 173
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQY 237
I F+ G G + V D +P DSE D LS+ Y + Y K +
Sbjct: 174 NAPI-TFESGLRGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEK 232
Query: 238 K 238
K
Sbjct: 233 K 233
>UNIPROTKB|P23228 [details] [associations]
symbol:HMGCS1 "Hydroxymethylglutaryl-CoA synthase,
cytoplasmic" species:9031 "Gallus gallus" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 GO:GO:0005737
GO:GO:0006695 Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299
EMBL:M60657 IPI:IPI00577321 PIR:S13887 RefSeq:NP_990742.1
UniGene:Gga.4388 ProteinModelPortal:P23228 SMR:P23228 STRING:P23228
PRIDE:P23228 GeneID:396379 KEGG:gga:396379 CTD:3157 eggNOG:COG3425
HOGENOM:HOG000012351 HOVERGEN:HBG051912 InParanoid:P23228 KO:K01641
OrthoDB:EOG4F1X30 BRENDA:2.3.3.10 SABIO-RK:P23228 NextBio:20816421
GO:GO:0004421 TIGRFAMs:TIGR01833 Uniprot:P23228
Length = 522
Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 72/238 (30%), Positives = 111/238 (46%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLI-SD 179
L AIN+I S G ALV+A DI+ + T + P+GGAGAVAML+ S+
Sbjct: 136 LFNAINWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGAGAVAMLVGSN 184
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
P IF+ G G + D +P SE D LS+ YL + + Y+ ++
Sbjct: 185 APLIFER--GLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKI 240
>UNIPROTKB|G4NCU0 [details] [associations]
symbol:MGG_01026 "Hydroxymethylglutaryl-CoA synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000590
InterPro:IPR010122 InterPro:IPR013528 InterPro:IPR013746
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540
PROSITE:PS01226 EMBL:CM001235 GO:GO:0006696 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 KO:K01641 GO:GO:0004421
TIGRFAMs:TIGR01833 RefSeq:XP_003717917.1 ProteinModelPortal:G4NCU0
EnsemblFungi:MGG_01026T0 GeneID:2674675 KEGG:mgr:MGG_01026
Uniprot:G4NCU0
Length = 456
Score = 183 (69.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSLP-YEDPVSFAINAAAPL 62
+GI+AI +Y S +++ EL K+ + + ++ L Q K ED S A+ A + L
Sbjct: 8 IGIKAIEIYFPSQYVEQSELEKFDGVSSGKYTIGLGQTKMAFCDDREDIYSLALTATSNL 67
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
+ + ID NS+ + +E+ +D KS+ + + G N N + ACY T L
Sbjct: 68 LKKYA-IDTNSVGRLEVGTETLLDKSKSVKSVLMQLFGDNTNIEGVDTVNACYGGTNALI 126
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-DKP 181
++N+I G A+V+A DI+ + K P+GGAG VAML+ D P
Sbjct: 127 NSVNWIEGSGWDGRDAIVVAGDIALYA----KGNA-------RPTGGAGCVAMLVGPDAP 175
Query: 182 EIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
+ + G G + D +P SE D SL Y +++ Y KR
Sbjct: 176 IVVE--PGLRGSFMQHAYDFYKPDLASEYPYVDGHFSLTCYTKALDGAYRAYNKR 228
>UNIPROTKB|F1N9T0 [details] [associations]
symbol:HMGCS1 "Hydroxymethylglutaryl-CoA synthase,
cytoplasmic" species:9031 "Gallus gallus" [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 IPI:IPI00577321 GO:GO:0004421
TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096 EMBL:AADN02072051
EMBL:AADN02072052 Ensembl:ENSGALT00000023982 ArrayExpress:F1N9T0
Uniprot:F1N9T0
Length = 522
Score = 183 (69.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 69/237 (29%), Positives = 108/237 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L AIN+I S G ALV+A DI+ + T + P+GGAGAVAML+
Sbjct: 136 LFNAINWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGAGAVAMLVGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+ F+ G G + D +P SE D LS+ YL + + Y+ ++
Sbjct: 185 APLI-FERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKI 240
>UNIPROTKB|F1NTT0 [details] [associations]
symbol:HMGCS1 "Hydroxymethylglutaryl-CoA synthase,
cytoplasmic" species:9031 "Gallus gallus" [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0004421 TIGRFAMs:TIGR01833
OMA:RDFTLND GeneTree:ENSGT00390000006096 EMBL:AADN02072051
EMBL:AADN02072052 IPI:IPI00818560 Ensembl:ENSGALT00000038960
ArrayExpress:F1NTT0 Uniprot:F1NTT0
Length = 525
Score = 183 (69.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 69/237 (29%), Positives = 108/237 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 20 VGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKL 79
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 80 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAA 138
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L AIN+I S G ALV+A DI+ + T + P+GGAGAVAML+
Sbjct: 139 LFNAINWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGAGAVAMLVGPN 187
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+ F+ G G + D +P SE D LS+ YL + + Y+ ++
Sbjct: 188 APLI-FERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKI 243
>UNIPROTKB|E2QX73 [details] [associations]
symbol:HMGCS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IEA] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 CTD:3157 KO:K01641
GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND
GeneTree:ENSGT00390000006096 EMBL:AAEX03003138 EMBL:AAEX03003139
RefSeq:XP_536483.3 ProteinModelPortal:E2QX73
Ensembl:ENSCAFT00000029484 GeneID:479344 KEGG:cfa:479344
NextBio:20854539 Uniprot:E2QX73
Length = 520
Score = 180 (68.4 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 69/238 (28%), Positives = 108/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCLTVVQNL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ S + + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MERHS-LSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + T + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APLI-FDRGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIR 241
>UNIPROTKB|F6RJG0 [details] [associations]
symbol:HMGCS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=IEA] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0004421
TIGRFAMs:TIGR01833 OMA:RDFTLND GeneTree:ENSGT00390000006096
EMBL:DAAA02050503 IPI:IPI00968674 Ensembl:ENSBTAT00000015713
Uniprot:F6RJG0
Length = 565
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/238 (28%), Positives = 109/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 62 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 121
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 122 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAA 180
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + T + P+GG GAVAMLI
Sbjct: 181 VFNAVNWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGVGAVAMLIGPN 229
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ F+ G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 230 APLI-FERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIR 286
>UNIPROTKB|Q01581 [details] [associations]
symbol:HMGCS1 "Hydroxymethylglutaryl-CoA synthase,
cytoplasmic" species:9606 "Homo sapiens" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0033197
"response to vitamin E" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043177 "organic acid binding" evidence=IEA]
[GO:0046690 "response to tellurium ion" evidence=IEA] [GO:0055094
"response to lipoprotein particle stimulus" evidence=IEA]
[GO:0071372 "cellular response to follicle-stimulating hormone
stimulus" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0001101 "response to acid"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0009645 "response to low light intensity
stimulus" evidence=IEA] [GO:0014074 "response to purine-containing
compound" evidence=IEA] [GO:0006629 "lipid metabolic process"
evidence=NAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006695
"cholesterol biosynthetic process" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] Reactome:REACT_111217 UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007420 GO:GO:0071372
GO:GO:0042493 GO:GO:0033197 GO:GO:0008144 GO:GO:0071397
GO:GO:0001889 GO:GO:0014074 GO:GO:0044255 GO:GO:0006695
Pathway_Interaction_DB:hnf3bpathway GO:GO:0008584 GO:GO:0016853
GO:GO:0001101 Gene3D:3.40.47.10 SUPFAM:SSF53901 EMBL:CH471119
GO:GO:0008299 GO:GO:0043177 CTD:3157 eggNOG:COG3425
HOGENOM:HOG000012351 HOVERGEN:HBG051912 KO:K01641 OrthoDB:EOG4F1X30
BRENDA:2.3.3.10 GO:GO:0004421 TIGRFAMs:TIGR01833 EMBL:X66435
EMBL:L25798 EMBL:BT007302 EMBL:AK315593 EMBL:BC000297
IPI:IPI00008475 PIR:S27197 PIR:S45497 RefSeq:NP_001091742.1
RefSeq:NP_002121.4 UniGene:Hs.397729 UniGene:Hs.741287 PDB:2P8U
PDBsum:2P8U ProteinModelPortal:Q01581 SMR:Q01581 IntAct:Q01581
STRING:Q01581 PhosphoSite:Q01581 DMDM:1708239 PaxDb:Q01581
PeptideAtlas:Q01581 PRIDE:Q01581 DNASU:3157 Ensembl:ENST00000325110
Ensembl:ENST00000433297 GeneID:3157 KEGG:hsa:3157 UCSC:uc003jnq.4
GeneCards:GC05M043326 HGNC:HGNC:5007 HPA:CAB032907 HPA:HPA036913
HPA:HPA036914 MIM:142940 neXtProt:NX_Q01581 PharmGKB:PA29337
InParanoid:Q01581 OMA:RDFTLND PhylomeDB:Q01581
BioCyc:MetaCyc:ENSG00000112972-MONOMER SABIO-RK:Q01581
ChiTaRS:HMGCS1 EvolutionaryTrace:Q01581 GenomeRNAi:3157
NextBio:12504 ArrayExpress:Q01581 Bgee:Q01581 CleanEx:HS_HMGCS1
Genevestigator:Q01581 GermOnline:ENSG00000112972 GO:GO:0055094
GO:GO:0009645 GO:GO:0046690 Uniprot:Q01581
Length = 520
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 68/237 (28%), Positives = 107/237 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q K ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +N+ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 77 MER-NNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + T + P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIA-VYATGNAR----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+ F+ G G + D +P SE D LS+ YL + + Y K++
Sbjct: 185 APLI-FERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKI 240
>SGD|S000004595 [details] [associations]
symbol:ERG13 "3-hydroxy-3-methylglutaryl-CoA (HMG-CoA)
synthase" species:4932 "Saccharomyces cerevisiae" [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=IEA;IMP] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0006696 "ergosterol biosynthetic process" evidence=IMP]
[GO:0003824 "catalytic activity" evidence=IEA] UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 SGD:S000004595
EMBL:BK006946 GO:GO:0006696 Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0008299 EMBL:Z50178 eggNOG:COG3425 HOGENOM:HOG000012351
KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421 TIGRFAMs:TIGR01833
GeneTree:ENSGT00390000006096 OMA:DSVTMAS OrthoDB:EOG4G7G73
EMBL:X96617 PIR:S58202 RefSeq:NP_013580.1 ProteinModelPortal:P54839
SMR:P54839 DIP:DIP-5071N IntAct:P54839 MINT:MINT-546775
STRING:P54839 PaxDb:P54839 PeptideAtlas:P54839 PRIDE:P54839
EnsemblFungi:YML126C GeneID:854913 KEGG:sce:YML126C CYGD:YML126c
BioCyc:MetaCyc:MONOMER-648 NextBio:977914 Genevestigator:P54839
GermOnline:YML126C Uniprot:P54839
Length = 491
Score = 174 (66.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 70/243 (28%), Positives = 109/243 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
VGI+ I +Y + ++ EL K+ + ++ + + Q ++S ED S ++ +
Sbjct: 49 VGIKGIQIYIPTQCVNQSELEKFDGVSQGKY-TIGLGQTNMSFVNDREDIYSMSLTVLSK 107
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGL 121
LI + NID N I + +E+ ID KS+ + + G N + + ACY T L
Sbjct: 108 LIKSY-NIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGENTDVEGIDTLNACYGGTNAL 166
Query: 122 QMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-DK 180
++N+I S G A+V+ DI+ + DK P+GGAG VAM I D
Sbjct: 167 FNSLNWIESNAWDGRDAIVVCGDIAIY----DKGAA-------RPTGGAGTVAMWIGPDA 215
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQYK 238
P +F S Y D +P SE D SL Y+ Q +K Y K+ K
Sbjct: 216 PIVFDSVRAS---YMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISK 272
Query: 239 IIV 241
+V
Sbjct: 273 GLV 275
>MGI|MGI:107592 [details] [associations]
symbol:Hmgcs1 "3-hydroxy-3-methylglutaryl-Coenzyme A synthase
1" species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0006695 "cholesterol biosynthetic process"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008202 "steroid metabolic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0010243 "response to organic nitrogen"
evidence=ISO] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043177 "organic acid
binding" evidence=ISO] UniPathway:UPA00058 InterPro:IPR000590
InterPro:IPR010122 InterPro:IPR013528 InterPro:IPR013746
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540
PROSITE:PS01226 MGI:MGI:107592 GO:GO:0005829 GO:GO:0007420
GO:GO:0071372 GO:GO:0042493 GO:GO:0033197 GO:GO:0008144
GO:GO:0071397 GO:GO:0001889 GO:GO:0014074 GO:GO:0006695
GO:GO:0008584 GO:GO:0016853 GO:GO:0001101 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0043177 CTD:3157 eggNOG:COG3425
HOGENOM:HOG000012351 HOVERGEN:HBG051912 KO:K01641 OrthoDB:EOG4F1X30
GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND GO:GO:0055094
GO:GO:0009645 GO:GO:0046690 EMBL:BC023851 EMBL:BC029693
EMBL:BC034317 EMBL:AK031297 EMBL:AK044835 EMBL:AK045094
EMBL:AK135551 IPI:IPI00331707 RefSeq:NP_666054.2 UniGene:Mm.61526
ProteinModelPortal:Q8JZK9 SMR:Q8JZK9 STRING:Q8JZK9
PhosphoSite:Q8JZK9 REPRODUCTION-2DPAGE:Q8JZK9 PaxDb:Q8JZK9
PRIDE:Q8JZK9 Ensembl:ENSMUST00000179869 GeneID:208715
KEGG:mmu:208715 UCSC:uc007rzv.1 GeneTree:ENSGT00390000006096
InParanoid:Q8JZK9 NextBio:449244 Bgee:Q8JZK9 CleanEx:MM_HMGCS1
Genevestigator:Q8JZK9 GermOnline:ENSMUSG00000075461 Uniprot:Q8JZK9
Length = 520
Score = 174 (66.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q + ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ S + + I + +E+ ID KS+ + + + N + + ACY TA
Sbjct: 77 MERHS-LSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N++ S G ALV+A DI+ + T + P+GG GAVA+LI
Sbjct: 136 VFNAVNWVESSSWDGRYALVVAGDIA-IYATGNAR----------PTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APLI-FDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIR 241
>RGD|70970 [details] [associations]
symbol:Hmgcs1 "3-hydroxy-3-methylglutaryl-CoA synthase 1
(soluble)" species:10116 "Rattus norvegicus" [GO:0001101 "response
to acid" evidence=IEP] [GO:0001889 "liver development" evidence=IEP]
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=IDA;IMP;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0007420 "brain development" evidence=IEP] [GO:0008144 "drug
binding" evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEP]
[GO:0009645 "response to low light intensity stimulus" evidence=IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEP] [GO:0010243
"response to organic nitrogen" evidence=IDA] [GO:0014070 "response
to organic cyclic compound" evidence=IEP] [GO:0014074 "response to
purine-containing compound" evidence=IEP] [GO:0016853 "isomerase
activity" evidence=IDA] [GO:0033197 "response to vitamin E"
evidence=IEP] [GO:0034698 "response to gonadotropin stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0043177 "organic acid binding" evidence=IDA] [GO:0046690
"response to tellurium ion" evidence=IEP] [GO:0055094 "response to
lipoprotein particle stimulus" evidence=IEP] [GO:0070723 "response
to cholesterol" evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071397
"cellular response to cholesterol" evidence=IEP] [GO:0071407
"cellular response to organic cyclic compound" evidence=IEP]
[GO:0005730 "nucleolus" evidence=ISO] UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 RGD:70970 GO:GO:0005829
GO:GO:0042803 GO:GO:0007420 GO:GO:0071372 GO:GO:0042493
GO:GO:0033197 GO:GO:0008144 GO:GO:0071397 GO:GO:0001889
GO:GO:0014074 GO:GO:0006695 GO:GO:0008584 GO:GO:0016853
GO:GO:0001101 Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299
GO:GO:0043177 CTD:3157 eggNOG:COG3425 HOGENOM:HOG000012351
HOVERGEN:HBG051912 KO:K01641 OrthoDB:EOG4F1X30 BRENDA:2.3.3.10
GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND GO:GO:0055094
GO:GO:0009645 GO:GO:0046690 GeneTree:ENSGT00390000006096 EMBL:X52625
IPI:IPI00188158 PIR:S12736 RefSeq:NP_058964.1 UniGene:Rn.5106
ProteinModelPortal:P17425 SMR:P17425 STRING:P17425
PhosphoSite:P17425 PRIDE:P17425 Ensembl:ENSRNOT00000023554
GeneID:29637 KEGG:rno:29637 InParanoid:P17425 BindingDB:P17425
ChEMBL:CHEMBL2189 NextBio:609884 Genevestigator:P17425
GermOnline:ENSRNOG00000016552 Uniprot:P17425
Length = 520
Score = 174 (66.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY +D ++ L Q + ED S + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ + + + N + + ACY TA
Sbjct: 77 MER-NSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + N P+GG GAVA+LI
Sbjct: 136 VFNAVNWIESSSWDGRYALVVAGDIA---IYASGNA--------RPTGGVGAVALLIGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G G + D +P SE D LS+ YL + + Y+K+++
Sbjct: 185 APVI-FDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIR 241
>DICTYBASE|DDB_G0274871 [details] [associations]
symbol:hgsB "hydroxymethylglutaryl-CoA synthase"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016126 "sterol biosynthetic process" evidence=IEA] [GO:0008202
"steroid metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] UniPathway:UPA00058 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 dictyBase:DDB_G0274871
GenomeReviews:CM000151_GR GO:GO:0016126 EMBL:AAFI02000012
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 eggNOG:COG3425
KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833 ProtClustDB:CLSZ2429883
RefSeq:XP_644076.1 ProteinModelPortal:Q86HL5 STRING:Q86HL5
PRIDE:Q86HL5 EnsemblProtists:DDB0217522 GeneID:8619505
KEGG:ddi:DDB_G0274871 OMA:ESKYRAS Uniprot:Q86HL5
Length = 468
Score = 171 (65.3 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 70/239 (29%), Positives = 108/239 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL--PYEDPVSFAINAAAP 61
+GI AI++Y +++ EL KY K+ ++ + + Q ++S ED VS A+ +
Sbjct: 7 IGICAIDIYFPQTYVNQSELKKYDKVSNGKY-TIGLGQTNMSFVGDREDIVSMAMTSVKM 65
Query: 62 LIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTA 119
++ S ID SI + +E+ ID KS+ + I N L + ACY T
Sbjct: 66 MMSKYS-IDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTN 124
Query: 120 GLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISD 179
L ++ +I S G ALV+ DI+ + K P+GGAG V MLI
Sbjct: 125 ALFNSLQWIESSYWDGRYALVVTGDIAVY----SKGAA-------RPTGGAGVVTMLIGP 173
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ FD G + V D +P SE D LS+ YL + + EYKK+ +
Sbjct: 174 NATLI-FDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFE 231
>ASPGD|ASPL0000074231 [details] [associations]
symbol:AN4923 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA;RCA]
[GO:0010142 "farnesyl diphosphate biosynthetic process, mevalonate
pathway" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR000590
InterPro:IPR010122 InterPro:IPR013528 InterPro:IPR013746
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540
PROSITE:PS01226 EMBL:BN001303 EMBL:AACD01000084 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 eggNOG:COG3425 HOGENOM:HOG000012351
KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND
OrthoDB:EOG4G7G73 RefSeq:XP_662527.1 ProteinModelPortal:Q5B3F7
STRING:Q5B3F7 EnsemblFungi:CADANIAT00005477 GeneID:2872723
KEGG:ani:AN4923.2 Uniprot:Q5B3F7
Length = 459
Score = 169 (64.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 70/237 (29%), Positives = 104/237 (43%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
+GI+AI +Y S +D EL K+ + ++ L Q K S ED S A+ + L
Sbjct: 7 IGIKAIEVYFPSQCLDQTELEKHDGVSEGKYTIGLGQSKMSFCDDREDIYSIALTTLSSL 66
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
+ NID NS+ + +E+ +D KS+ + + + N + + ACY T
Sbjct: 67 MKKY-NIDPNSVGRLEVGTETLLDKSKSVKSVLMQLFAPHGNTNIEGVDTVNACYGGTNA 125
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-D 179
L +IN++ S G A+V+ DI+ + K P+GGAG VAMLI D
Sbjct: 126 LFNSINWVESSAWDGRDAVVVCGDIALYA----KGAA-------RPTGGAGCVAMLIGPD 174
Query: 180 KPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
P IF+ G Y D +P SE D SL Y + +K Y R
Sbjct: 175 APIIFE--PGLRASYLTHAYDFYKPDLTSEYPVVDGHFSLRCYTEAVDACYKAYGAR 229
>UNIPROTKB|P54868 [details] [associations]
symbol:HMGCS2 "Hydroxymethylglutaryl-CoA synthase,
mitochondrial" species:9606 "Homo sapiens" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=TAS] [GO:0005759
"mitochondrial matrix" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0046950 "cellular ketone body
metabolic process" evidence=TAS] [GO:0046951 "ketone body
biosynthetic process" evidence=TAS] Reactome:REACT_111217
UniPathway:UPA00058 InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0007420 GO:GO:0005743 GO:GO:0032869 GO:GO:0042493
GO:GO:0045471 EMBL:CH471122 GO:GO:0005759 GO:GO:0030324
GO:GO:0071385 GO:GO:0034014 GO:GO:0007584 GO:GO:0060612
GO:GO:0001889 GO:GO:0042594 GO:GO:0044255 GO:GO:0006695
GO:GO:0071222 GO:GO:0007494 GO:GO:0071398 GO:GO:0001822
GO:GO:0033555 GO:GO:0033574 GO:GO:0010038 GO:GO:0051591
GO:GO:0009266 GO:GO:0033762 GO:GO:0060416 GO:GO:0071230
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0046951 GO:GO:0008299
GO:GO:0070543 eggNOG:COG3425 HOGENOM:HOG000012351
HOVERGEN:HBG051912 KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421
TIGRFAMs:TIGR01833 CTD:3158 OrthoDB:EOG4H72B9 EMBL:X83618
EMBL:U81859 EMBL:U81851 EMBL:U81852 EMBL:U81853 EMBL:U81854
EMBL:U81855 EMBL:U81856 EMBL:U81857 EMBL:U81858 EMBL:AK303777
EMBL:AL589734 EMBL:BC044217 EMBL:U12788 EMBL:U12789 IPI:IPI00008934
IPI:IPI00945760 PIR:S71623 RefSeq:NP_001159579.1 RefSeq:NP_005509.1
UniGene:Hs.59889 PDB:2WYA PDBsum:2WYA ProteinModelPortal:P54868
SMR:P54868 STRING:P54868 PhosphoSite:P54868 DMDM:1708234
REPRODUCTION-2DPAGE:IPI00008934 PaxDb:P54868 PeptideAtlas:P54868
PRIDE:P54868 Ensembl:ENST00000369406 Ensembl:ENST00000544913
GeneID:3158 KEGG:hsa:3158 UCSC:uc001eid.3 GeneCards:GC01M120290
H-InvDB:HIX0160007 HGNC:HGNC:5008 MIM:600234 MIM:605911
neXtProt:NX_P54868 Orphanet:35701 PharmGKB:PA29338
InParanoid:P54868 OMA:DSVTMAS PhylomeDB:P54868
BioCyc:MetaCyc:HS05836-MONOMER EvolutionaryTrace:P54868
GenomeRNAi:3158 NextBio:12510 ArrayExpress:P54868 Bgee:P54868
CleanEx:HS_HMGCS2 Genevestigator:P54868 GermOnline:ENSG00000134240
GO:GO:0034284 GO:GO:0034696 Uniprot:P54868
Length = 508
Score = 166 (63.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 65/238 (27%), Positives = 108/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L KY ++ ++ L Q + ED S + L
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +S+ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MERIQ-LPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G A+V+ DI+ V N P+GGAGAVAMLI K
Sbjct: 173 LFNAANWMESSSWDGRYAMVVCGDIA---VYPSGNA--------RPTGGAGAVAMLIGPK 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + V D +P SE D LS+ YL + + Y+K++Q
Sbjct: 222 APL-ALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQ 278
>ZFIN|ZDB-GENE-040426-1042 [details] [associations]
symbol:hmgcs1 "3-hydroxy-3-methylglutaryl-Coenzyme
A synthase 1 (soluble)" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000590
InterPro:IPR010122 InterPro:IPR013528 InterPro:IPR013746
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540
PROSITE:PS01226 ZFIN:ZDB-GENE-040426-1042 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0004421 TIGRFAMs:TIGR01833
GeneTree:ENSGT00390000006096 EMBL:BX322605 IPI:IPI00481074
Ensembl:ENSDART00000147060 ArrayExpress:F1R6H4 Bgee:F1R6H4
Uniprot:F1R6H4
Length = 519
Score = 166 (63.5 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 66/237 (27%), Positives = 104/237 (43%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL +Y + ++ L Q + ED S + L
Sbjct: 17 VGIIAMEVYVPSQYVDQAELEEYDGVGAGKYTVGLGQARMGFCSDREDINSLCLTVVQRL 76
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + S+ + +E+ ID KS T + + N + + ACY TA
Sbjct: 77 MER-NGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFEESGNTDVEGVDTTNACYGGTAA 135
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A+N++ S G ALV+A DI+ + T P+GGAGAVAML+
Sbjct: 136 LFNAVNWVESSSWDGRYALVVAGDIA-VYATGSAR----------PTGGAGAVAMLVGPN 184
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+ F+ G G + D +P SE D LS+ YL Q + YK ++
Sbjct: 185 APL-AFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDQCYSVYKNKI 240
>UNIPROTKB|Q2KIE6 [details] [associations]
symbol:HMGCS2 "Hydroxymethylglutaryl-CoA synthase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
UniPathway:UPA00058 InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0005743 GO:GO:0006695 Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0008299 eggNOG:COG3425 HOGENOM:HOG000012351
HOVERGEN:HBG051912 KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833
GeneTree:ENSGT00390000006096 EMBL:BC112666 IPI:IPI00742620
RefSeq:NP_001039348.1 UniGene:Bt.9689 ProteinModelPortal:Q2KIE6
SMR:Q2KIE6 STRING:Q2KIE6 PRIDE:Q2KIE6 Ensembl:ENSBTAT00000005088
GeneID:503684 KEGG:bta:503684 CTD:3158 InParanoid:Q2KIE6
OMA:LDDLQFM OrthoDB:EOG4H72B9 NextBio:20866256 Uniprot:Q2KIE6
Length = 508
Score = 165 (63.1 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 65/238 (27%), Positives = 109/238 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQ-QKSVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D EL K+ K++ R+ L Q Q ED S + L
Sbjct: 54 VGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCLTVVQQL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +S+ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MER-TQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G ALV+ DI+ V N P+GGAGAVAML+ +
Sbjct: 173 LFNAANWMESSSWDGRYALVVCGDIA---VYPSGNA--------RPTGGAGAVAMLVGPE 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + V D +P SE D LS+ YL + + Y+++++
Sbjct: 222 APLV-LERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIE 278
>CGD|CAL0004537 [details] [associations]
symbol:ERG13 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0010142 "farnesyl
diphosphate biosynthetic process, mevalonate pathway" evidence=IEA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=IEA]
[GO:0006696 "ergosterol biosynthetic process" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 CGD:CAL0004537
GO:GO:0071216 GO:GO:0036180 GO:GO:0035690 GO:GO:0009267
GO:GO:0036170 Gene3D:3.40.47.10 SUPFAM:SSF53901 EMBL:AACQ01000069
GO:GO:0008299 eggNOG:COG3425 KO:K01641 GO:GO:0004421
TIGRFAMs:TIGR01833 RefSeq:XP_716446.1 ProteinModelPortal:Q5A3Z7
STRING:Q5A3Z7 GeneID:3641881 KEGG:cal:CaO19.7312 Uniprot:Q5A3Z7
Length = 451
Score = 164 (62.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL-PYEDPVSFAINAAAPL 62
+GI+ I +Y ++ +L K+ + ++ L Q + ED S ++ + L
Sbjct: 10 IGIKGIEVYIPGQAVNQSDLEKFDGIPQGKYTIGLGQTNMAFVNDREDIYSISLTVLSRL 69
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I N S ID N I + +E+ +D KS+ + + N + + ACY T+ +
Sbjct: 70 IKNYS-IDTNKIGRLEVGTETLLDKSKSVKSVLMQLFPGNNDIEGIDTVNACYGGTSSVI 128
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-DKP 181
AIN+I S G A+V+A DI+ + DK P+GG GA+A+LI D P
Sbjct: 129 NAINWIESSSWDGRDAIVVAGDIAIY----DKGAA-------RPTGGVGAIALLIGPDAP 177
Query: 182 EIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+F GS +++ D +P SE D SL Y+ +K Y K++
Sbjct: 178 IVFDSIRGSFMEHAY---DFYKPDFTSEYPVVDGHFSLSCYVKAVDNCYKNYSKKI 230
>UNIPROTKB|Q5A3Z7 [details] [associations]
symbol:ERG13 "Putative uncharacterized protein ERG13"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 CGD:CAL0004537
GO:GO:0071216 GO:GO:0036180 GO:GO:0035690 GO:GO:0009267
GO:GO:0036170 Gene3D:3.40.47.10 SUPFAM:SSF53901 EMBL:AACQ01000069
GO:GO:0008299 eggNOG:COG3425 KO:K01641 GO:GO:0004421
TIGRFAMs:TIGR01833 RefSeq:XP_716446.1 ProteinModelPortal:Q5A3Z7
STRING:Q5A3Z7 GeneID:3641881 KEGG:cal:CaO19.7312 Uniprot:Q5A3Z7
Length = 451
Score = 164 (62.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQKSVSL-PYEDPVSFAINAAAPL 62
+GI+ I +Y ++ +L K+ + ++ L Q + ED S ++ + L
Sbjct: 10 IGIKGIEVYIPGQAVNQSDLEKFDGIPQGKYTIGLGQTNMAFVNDREDIYSISLTVLSRL 69
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I N S ID N I + +E+ +D KS+ + + N + + ACY T+ +
Sbjct: 70 IKNYS-IDTNKIGRLEVGTETLLDKSKSVKSVLMQLFPGNNDIEGIDTVNACYGGTSSVI 128
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLIS-DKP 181
AIN+I S G A+V+A DI+ + DK P+GG GA+A+LI D P
Sbjct: 129 NAINWIESSSWDGRDAIVVAGDIAIY----DKGAA-------RPTGGVGAIALLIGPDAP 177
Query: 182 EIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+F GS +++ D +P SE D SL Y+ +K Y K++
Sbjct: 178 IVFDSIRGSFMEHAY---DFYKPDFTSEYPVVDGHFSLSCYVKAVDNCYKNYSKKI 230
>UNIPROTKB|F1SMG8 [details] [associations]
symbol:HMGCS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=IEA] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0004421
TIGRFAMs:TIGR01833 OMA:RDFTLND GeneTree:ENSGT00390000006096
EMBL:CU655897 Ensembl:ENSSSCT00000018376 Uniprot:F1SMG8
Length = 548
Score = 164 (62.8 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 65/237 (27%), Positives = 106/237 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y S ++D EL KY + R+ L Q K ED S + L
Sbjct: 45 VGIVALEIYFPSQYVDQAELEKYDGVAAGRYTIGLGQAKMGFCTDREDINSLCMTVVQNL 104
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ +++ + I + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 105 MER-NSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTINACYGGTAA 163
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
+ A+N+I S G ALV+A DI+ + + P+GG GA+A+LI
Sbjct: 164 VFNAVNWIESSSWDGRYALVVAGDIAVYAAGNAR-----------PTGGVGAIALLIGPN 212
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
+ F+ G G + D +P SE D LS+ YL + + Y+K++
Sbjct: 213 APLI-FERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIECYLSALDRCYSVYRKKI 268
>UNIPROTKB|E2RAD0 [details] [associations]
symbol:HMGCS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IEA] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0005743 Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299
KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833
GeneTree:ENSGT00390000006096 CTD:3158 OMA:LDDLQFM EMBL:AAEX03011027
RefSeq:XP_849878.1 ProteinModelPortal:E2RAD0
Ensembl:ENSCAFT00000016048 GeneID:607923 KEGG:cfa:607923
NextBio:20893611 Uniprot:E2RAD0
Length = 508
Score = 159 (61.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQ-QKSVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L KY ++ R+ L Q ED S + L
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +S+ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MER-TQLPWDSVGWLEVGTETIIDRSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G A+V+ DI+ V N P+GGAGAVAML+ K
Sbjct: 173 LFNAANWVESSSWDGRYAMVVCGDIA---VYPSGNA--------RPTGGAGAVAMLVGPK 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + V D +P +E D LS+ YL + + Y++++Q
Sbjct: 222 APL-TLERGLRGTHMENVYDFYKPDAATEYPIVDGKLSIQCYLRALDRCYTLYRQKIQ 278
>MGI|MGI:101939 [details] [associations]
symbol:Hmgcs2 "3-hydroxy-3-methylglutaryl-Coenzyme A synthase
2" species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0006695 "cholesterol biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0016126 "sterol biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 MGI:MGI:101939
GO:GO:0007420 GO:GO:0005743 GO:GO:0032869 GO:GO:0042493
GO:GO:0045471 GO:GO:0005759 GO:GO:0030324 GO:GO:0071385
GO:GO:0034014 GO:GO:0007584 GO:GO:0060612 GO:GO:0001889
GO:GO:0042594 GO:GO:0006695 GO:GO:0071222 GO:GO:0007494
GO:GO:0071398 GO:GO:0001822 GO:GO:0033555 GO:GO:0033574
GO:GO:0010038 GO:GO:0051591 GO:GO:0009266 GO:GO:0033762
GO:GO:0060416 GO:GO:0071230 Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0046951 GO:GO:0008299 GO:GO:0070543 eggNOG:COG3425
HOGENOM:HOG000012351 HOVERGEN:HBG051912 KO:K01641 BRENDA:2.3.3.10
GO:GO:0004421 TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096
CTD:3158 OMA:LDDLQFM OrthoDB:EOG4H72B9 GO:GO:0034284 GO:GO:0034696
EMBL:AK004865 EMBL:AK004902 EMBL:BC014714 EMBL:BC024744 EMBL:U12790
EMBL:U12791 IPI:IPI00420718 PIR:B55729 RefSeq:NP_032282.2
UniGene:Mm.289131 ProteinModelPortal:P54869 SMR:P54869
STRING:P54869 PhosphoSite:P54869 REPRODUCTION-2DPAGE:P54869
SWISS-2DPAGE:P54869 PaxDb:P54869 PRIDE:P54869
Ensembl:ENSMUST00000090746 Ensembl:ENSMUST00000120541 GeneID:15360
KEGG:mmu:15360 UCSC:uc008qpr.2 InParanoid:P54869 ChiTaRS:HMGCS2
NextBio:287976 Bgee:P54869 CleanEx:MM_HMGCS2 Genevestigator:P54869
GermOnline:ENSMUSG00000027875 Uniprot:P54869
Length = 508
Score = 156 (60.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L K+ ++ ++ L Q + ED S + L
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +++ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MER-TKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G ALV+ DI+ V N P+GGAGAVAMLI K
Sbjct: 173 LFNAANWMESSYWDGRYALVVCGDIA---VYPSGNA--------RPTGGAGAVAMLIGPK 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + D +P SE D LS+ YL + + Y+K++Q
Sbjct: 222 APLV-LEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQ 278
>WB|WBGene00017769 [details] [associations]
symbol:hmgs-1 species:6239 "Caenorhabditis elegans"
[GO:0004421 "hydroxymethylglutaryl-CoA synthase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] UniPathway:UPA00058 InterPro:IPR000590
InterPro:IPR010122 InterPro:IPR013528 InterPro:IPR013746
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540
PROSITE:PS01226 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0018996
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0016126
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 eggNOG:COG3425
HOGENOM:HOG000012351 KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421
TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096 OMA:DSVTMAS
EMBL:FO080538 EMBL:U12787 PIR:T25726 RefSeq:NP_504496.1
ProteinModelPortal:P54871 SMR:P54871 IntAct:P54871 STRING:P54871
PaxDb:P54871 EnsemblMetazoa:F25B4.6 GeneID:178956
KEGG:cel:CELE_F25B4.6 UCSC:F25B4.6 CTD:178956 WormBase:F25B4.6
InParanoid:P54871 NextBio:903278 Uniprot:P54871
Length = 462
Score = 154 (59.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 67/238 (28%), Positives = 104/238 (43%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFE-NLLMQQKSVSLPYEDPVSFAINAAAPL 62
VGI AI LY F+D +L K+ + + ++ L QQ ED VS ++ L
Sbjct: 14 VGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKL 73
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I+ I +SI ++ +E+ ID KS+ T + N + ++K AC+ L
Sbjct: 74 IETYK-ISTDSIGCLVVGTETMIDKSKSVKTALMDLFPGNSDIEGVDIKNACFGGAQALL 132
Query: 123 MAINFILSKVSPGAK-ALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKP 181
AI+++ K A+V+ DI+ + E T GGAGA+A LI
Sbjct: 133 HAIDWVTVNHPLDKKNAIVVVADIAIY--EEGPARCT---------GGAGAIAFLICPDA 181
Query: 182 EIFQFDIGSNGYYSFEVMDTCRPI-P-DSEAGNAD--LSLLSYLDCCAQSFKEYKKRV 235
I D + + D +PI P SE D LSL SYL+ ++ + +V
Sbjct: 182 SI-PIDRQFSACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKV 238
>UNIPROTKB|F1M9Q5 [details] [associations]
symbol:Hmgcs2 "Hydroxymethylglutaryl-CoA synthase,
mitochondrial" species:10116 "Rattus norvegicus" [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039
Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226 RGD:2804 GO:GO:0005743
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 GO:GO:0004421
TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096 IPI:IPI00210444
Ensembl:ENSRNOT00000026121 ArrayExpress:F1M9Q5 Uniprot:F1M9Q5
Length = 474
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 62/238 (26%), Positives = 107/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L K+ ++ ++ L Q + ED S + L
Sbjct: 20 VGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 79
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +++ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 80 MER-TKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 138
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G ALV+ DI+ V N P+GGAGAVAMLI K
Sbjct: 139 LFNAANWMESSYWDGRYALVVCGDIA---VYPSGNA--------RPTGGAGAVAMLIGPK 187
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + D +P SE D LS+ YL + + Y++++Q
Sbjct: 188 APLV-LEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQ 244
>RGD|2804 [details] [associations]
symbol:Hmgcs2 "3-hydroxy-3-methylglutaryl-CoA synthase 2
(mitochondrial)" species:10116 "Rattus norvegicus" [GO:0001822
"kidney development" evidence=IEP] [GO:0001889 "liver development"
evidence=IEP] [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0005759 "mitochondrial matrix" evidence=IDA]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0007420 "brain development" evidence=IEP] [GO:0007494 "midgut
development" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0009266 "response to temperature stimulus"
evidence=IEP] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0010038 "response to metal ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0030324 "lung
development" evidence=IEP] [GO:0032868 "response to insulin stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEP] [GO:0033555 "multicellular organismal response to
stress" evidence=IEP] [GO:0033574 "response to testosterone stimulus"
evidence=IEP] [GO:0033762 "response to glucagon stimulus"
evidence=IEP] [GO:0034014 "response to triglyceride" evidence=IEP]
[GO:0034284 "response to monosaccharide stimulus" evidence=IEP]
[GO:0034696 "response to prostaglandin F stimulus" evidence=IEP]
[GO:0042493 "response to drug" evidence=IEP] [GO:0042594 "response to
starvation" evidence=IEP] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0046951 "ketone body biosynthetic process"
evidence=IEP;TAS] [GO:0051384 "response to glucocorticoid stimulus"
evidence=IEP] [GO:0051591 "response to cAMP" evidence=IEP]
[GO:0060416 "response to growth hormone stimulus" evidence=IEP]
[GO:0060612 "adipose tissue development" evidence=IEP] [GO:0070542
"response to fatty acid" evidence=IEP] [GO:0070543 "response to
linoleic acid" evidence=IEP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEP] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEP] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=IEP] [GO:0071398 "cellular response
to fatty acid" evidence=IEP] [GO:0071407 "cellular response to
organic cyclic compound" evidence=IEP] UniPathway:UPA00058
InterPro:IPR000590 InterPro:IPR010122 InterPro:IPR013528
InterPro:IPR013746 InterPro:IPR016038 InterPro:IPR016039 Pfam:PF01154
Pfam:PF08540 PROSITE:PS01226 RGD:2804 GO:GO:0007420 GO:GO:0005743
GO:GO:0032869 GO:GO:0042493 GO:GO:0045471 GO:GO:0005759 GO:GO:0030324
GO:GO:0071385 GO:GO:0034014 GO:GO:0007584 GO:GO:0060612 GO:GO:0001889
GO:GO:0042594 GO:GO:0006695 GO:GO:0071222 GO:GO:0007494 GO:GO:0071398
GO:GO:0001822 GO:GO:0033555 GO:GO:0033574 GO:GO:0010038 GO:GO:0051591
GO:GO:0009266 GO:GO:0033762 GO:GO:0060416 GO:GO:0071230
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0046951 GO:GO:0008299
GO:GO:0070543 eggNOG:COG3425 HOGENOM:HOG000012351 HOVERGEN:HBG051912
KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421 TIGRFAMs:TIGR01833
OrthoDB:EOG4H72B9 GO:GO:0034284 GO:GO:0034696 EMBL:M33648 EMBL:M63800
IPI:IPI00210444 PIR:A35865 UniGene:Rn.29594 ProteinModelPortal:P22791
SMR:P22791 STRING:P22791 PhosphoSite:P22791 PRIDE:P22791
KEGG:rno:24450 UCSC:RGD:2804 InParanoid:P22791 NextBio:603355
ArrayExpress:P22791 Genevestigator:P22791
GermOnline:ENSRNOG00000019120 Uniprot:P22791
Length = 508
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 62/238 (26%), Positives = 107/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L K+ ++ ++ L Q + ED S + L
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +++ + +E+ ID K++ T + + N + + ACY TA
Sbjct: 114 MER-TKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G ALV+ DI+ V N P+GGAGAVAMLI K
Sbjct: 173 LFNAANWMESSYWDGRYALVVCGDIA---VYPSGNP--------RPTGGAGAVAMLIGPK 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + D +P SE D LS+ YL + + Y++++Q
Sbjct: 222 APLV-LEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQ 278
>POMBASE|SPAC4F8.14c [details] [associations]
symbol:hcs1 "3-hydroxy-3-methylglutaryl-CoA synthase"
species:4896 "Schizosaccharomyces pombe" [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006084 "acetyl-CoA metabolic process" evidence=IMP]
[GO:0006696 "ergosterol biosynthetic process" evidence=IMP]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0010142 "farnesyl diphosphate biosynthetic
process, mevalonate pathway" evidence=IMP] [GO:0070317 "negative
regulation of G0 to G1 transition" evidence=IMP]
UniPathway:UPA00058 InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
PomBase:SPAC4F8.14c GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0070317 GenomeReviews:CU329670_GR GO:GO:0006084
GO:GO:0006995 GO:GO:0006696 Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0010142 eggNOG:COG3425 HOGENOM:HOG000012351 KO:K01641
BRENDA:2.3.3.10 GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:DSVTMAS
EMBL:U32187 PIR:S61875 RefSeq:NP_593859.1 ProteinModelPortal:P54874
STRING:P54874 PRIDE:P54874 EnsemblFungi:SPAC4F8.14c.1
GeneID:2543141 KEGG:spo:SPAC4F8.14c OrthoDB:EOG4G7G73
NextBio:20804168 Uniprot:P54874
Length = 447
Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 61/234 (26%), Positives = 99/234 (42%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFE-NLLMQQKSVSLPYEDPVSFAINAAAPL 62
+GI+ + LY + +++ L + + T ++ L + + + ED SF + A + L
Sbjct: 8 IGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALSQL 67
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYSCTAGLQ 122
I ID + I + +E+ ID KS+ + + G N N + ACY L
Sbjct: 68 IKRYQ-IDISKIGRLEVGTETIIDKSKSVKSVLMQLFGDNHNVEGIDCVNACYGGVNALF 126
Query: 123 MAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDKPE 182
I++I S G +V+A DI+ + K P+GGAG VA+L+
Sbjct: 127 NTIDWIESSAWDGRDGIVVAGDIALYA----KGNA-------RPTGGAGCVALLVGPNAP 175
Query: 183 IFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
I F+ G G Y D +P SE D SL Y+ ++ Y R
Sbjct: 176 IV-FEPGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVR 228
>UNIPROTKB|E1C9C4 [details] [associations]
symbol:E1C9C4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004421 "hydroxymethylglutaryl-CoA synthase
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0005743 Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299
GO:GO:0004421 TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096
EMBL:AADN02033883 EMBL:AADN02033884 IPI:IPI00574180
Ensembl:ENSGALT00000004681 OMA:GPLSIQC Uniprot:E1C9C4
Length = 507
Score = 151 (58.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 57/238 (23%), Positives = 106/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRF-ENLLMQQKSVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + +++ EL +Y ++ ++ L QQ +ED S + L
Sbjct: 47 VGILALEVYFPAQYVEQSELERYDGVEAGKYTRGLGQQQMGFCAAHEDINSLCLTVVQRL 106
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + ++I + +E+ ID K++ T + + N + + ACY TA
Sbjct: 107 VER-GRLSWDAIGRLEVGTETVIDKSKAVKTVLMELFRESGNTDVEGIDTTNACYGGTAS 165
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A +++ S G A+V+ DI+ + T + P+GGAGA+AML+
Sbjct: 166 LFNAASWVESSAWDGRYAVVVCGDIA-VYATGNAR----------PTGGAGAIAMLVGPN 214
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + D +P SE D LS+ YL + + Y+++ +
Sbjct: 215 APLV-LERGLRGTHMEHAYDFYKPDLSSEYPVVDGPLSIQCYLRALDRCYAVYRRKAE 271
>UNIPROTKB|O02734 [details] [associations]
symbol:HMGCS2 "Hydroxymethylglutaryl-CoA synthase,
mitochondrial" species:9823 "Sus scrofa" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
UniPathway:UPA00058 InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0005743 GO:GO:0006695 Gene3D:3.40.47.10 SUPFAM:SSF53901
GO:GO:0008299 eggNOG:COG3425 HOGENOM:HOG000012351
HOVERGEN:HBG051912 KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421
TIGRFAMs:TIGR01833 GeneTree:ENSGT00390000006096 CTD:3158
OMA:LDDLQFM OrthoDB:EOG4H72B9 EMBL:U90884 EMBL:CR956647
RefSeq:NP_999545.1 UniGene:Ssc.14479 ProteinModelPortal:O02734
SMR:O02734 STRING:O02734 Ensembl:ENSSSCT00000007357 GeneID:397673
KEGG:ssc:397673 Uniprot:O02734
Length = 508
Score = 149 (57.5 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 61/238 (25%), Positives = 106/238 (44%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQ-QKSVSLPYEDPVSFAINAAAPL 62
VGI A+ +Y + ++D +L K+ ++ R+ L Q ED S + L
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRL 113
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ + + +S+ + +E+ ID KS+ T + + N + + ACY TA
Sbjct: 114 MER-TQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTAS 172
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A N++ S G A+V+ DI+ V N P+GGAGAVAML+ +
Sbjct: 173 LFNAANWVESSAWDGRYAVVVCGDIA---VYPRGNS--------RPTGGAGAVAMLVGPE 221
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKRVQ 236
+ + G G + D +P SE D LS+ YL + + Y+++++
Sbjct: 222 APL-ALERGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIE 278
>FB|FBgn0010611 [details] [associations]
symbol:Hmgs "HMG Coenzyme A synthase" species:7227
"Drosophila melanogaster" [GO:0001700 "embryonic development via
the syncytial blastoderm" evidence=IMP] [GO:0004421
"hydroxymethylglutaryl-CoA synthase activity" evidence=ISS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
EMBL:AE013599 GO:GO:0022008 GO:GO:0001700 GO:GO:0046331
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0008299 eggNOG:COG3425
KO:K01641 GO:GO:0004421 TIGRFAMs:TIGR01833 OMA:RDFTLND
GeneTree:ENSGT00390000006096 EMBL:AY051743 EMBL:DQ062782
RefSeq:NP_524711.1 RefSeq:NP_725567.1 RefSeq:NP_725568.1
RefSeq:NP_725569.1 RefSeq:NP_725570.1 UniGene:Dm.7717 SMR:Q7K4Q9
STRING:Q7K4Q9 EnsemblMetazoa:FBtr0087145 EnsemblMetazoa:FBtr0087146
EnsemblMetazoa:FBtr0087147 EnsemblMetazoa:FBtr0087148
EnsemblMetazoa:FBtr0087149 GeneID:44154 KEGG:dme:Dmel_CG4311
UCSC:CG4311-RA CTD:44154 FlyBase:FBgn0010611 InParanoid:Q7K4Q9
OrthoDB:EOG46Q57T GenomeRNAi:44154 NextBio:836889 Uniprot:Q7K4Q9
Length = 465
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/236 (25%), Positives = 99/236 (41%)
Query: 4 VGIEAINLYGGSVFIDVIELAKYRKLDTVRFENLLMQQK-SVSLPYEDPVSFAINAAAPL 62
VGI AI + S ++D EL + ++ L Q K ED S + + L
Sbjct: 9 VGIRAIEILFPSQYVDQTELETFDGASAGKYTIGLGQAKMGFCSDREDVNSLCLTVVSRL 68
Query: 63 IDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRL--FELKQACYSCTAG 120
++ ++ + I + +E+ +D KS+ + + + N + + ACY TA
Sbjct: 69 LER-QHVKHSEIGRLEVGTETIVDKSKSVKSVLMQLFAESGNTDIEGIDTTNACYGGTAA 127
Query: 121 LQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEPSGGAGAVAMLISDK 180
L A+N++ S G AL + DI+ + K P+GGAGAVAML+
Sbjct: 128 LFNAVNWVESSSWDGRLALAVCADIAVYA----KGAA-------RPTGGAGAVAMLVGPN 176
Query: 181 PEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYLDCCAQSFKEYKKR 234
+ D G + D +P SE D LS+ YL ++ Y+K+
Sbjct: 177 APLI-LDRGLRATHMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKK 231
>TIGR_CMR|CJE_1492 [details] [associations]
symbol:CJE_1492 "3-oxoacyl-(acyl-carrier-protein)
synthase, putative" species:195099 "Campylobacter jejuni RM1221"
[GO:0004315 "3-oxoacyl-[acyl-carrier-protein] synthase activity"
evidence=ISS] [GO:0006633 "fatty acid biosynthetic process"
evidence=ISS] InterPro:IPR013747 InterPro:IPR013751
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF08541 Pfam:PF08545
GO:GO:0005737 GO:GO:0006633 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0004315 eggNOG:COG0332
KO:K00648 RefSeq:YP_179478.1 ProteinModelPortal:Q5HTA7
STRING:Q5HTA7 GeneID:3232124 KEGG:cjr:CJE1492 PATRIC:20044778
HOGENOM:HOG000246676 OMA:ENLYMDG ProtClustDB:PRK12880
BioCyc:CJEJ195099:GJC0-1521-MONOMER Uniprot:Q5HTA7
Length = 353
Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 58/167 (34%), Positives = 85/167 (50%)
Query: 57 NAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGLNRNCRLFELKQACYS 116
+AA L+ L NIDKNS++ +I ++S F S + Y+H L L+ F+L QAC
Sbjct: 66 HAANTLLQGL-NIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTVAFDLGQACAG 124
Query: 117 CTAGLQMAINFILSKVSPGAKALVIATD-ISRFFVTEDKNELTMEWAFFEPSGGAGAVAM 175
GL +A + I S + K L+I D +S+F KN M A P G G A
Sbjct: 125 YLYGLFVAHSLIQSGLG---KILLICGDTLSKFI--HPKN---MNLA---PIFGDGVSAT 173
Query: 176 LI--SDKPEIFQFDIGSNGYYSFEVM--DTCRPIPDSEAGNADLSLL 218
LI +D E F F++GS+G Y +++ IP ++ N D SL+
Sbjct: 174 LIEKTDFNEAF-FELGSDGKYFDKLIIPKGAMRIPKADIFNDD-SLM 218
>TAIR|locus:2137015 [details] [associations]
symbol:HMGS "HYDROXYMETHYLGLUTARYL-COA SYNTHASE"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004421 "hydroxymethylglutaryl-CoA
synthase activity" evidence=IEA;IGI;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019287 "isopentenyl diphosphate biosynthetic
process, mevalonate pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006084
"acetyl-CoA metabolic process" evidence=RCA] [GO:0003985
"acetyl-CoA C-acetyltransferase activity" evidence=IGI]
UniPathway:UPA00058 InterPro:IPR000590 InterPro:IPR010122
InterPro:IPR013528 InterPro:IPR013746 InterPro:IPR016038
InterPro:IPR016039 Pfam:PF01154 Pfam:PF08540 PROSITE:PS01226
GO:GO:0005829 GO:GO:0009506 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016126 EMBL:AL078606 EMBL:AL161532 Gene3D:3.40.47.10
SUPFAM:SSF53901 GO:GO:0019287 eggNOG:COG3425 HOGENOM:HOG000012351
KO:K01641 BRENDA:2.3.3.10 GO:GO:0004421 TIGRFAMs:TIGR01833
OMA:RDFTLND EMBL:X83882 EMBL:U79160 EMBL:U79161 EMBL:AY140008
EMBL:BT008492 IPI:IPI00530283 IPI:IPI00533922 PIR:T09341
RefSeq:NP_192919.1 RefSeq:NP_849361.1 UniGene:At.5362
ProteinModelPortal:P54873 SMR:P54873 STRING:P54873 PaxDb:P54873
PRIDE:P54873 EnsemblPlants:AT4G11820.2 GeneID:826788
KEGG:ath:AT4G11820 TAIR:At4g11820 InParanoid:P54873
PhylomeDB:P54873 ProtClustDB:PLN02577 BioCyc:ARA:AT4G11820-MONOMER
BioCyc:MetaCyc:AT4G11820-MONOMER Genevestigator:P54873
GermOnline:AT4G11820 Uniprot:P54873
Length = 461
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/184 (30%), Positives = 81/184 (44%)
Query: 49 EDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHYLGL--NRNCR 106
ED +S + NA L + ID N I + SE+ ID KS+ T++ N +
Sbjct: 51 EDVISMSFNAVTSLFEKYK-IDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVE 109
Query: 107 LFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDISRFFVTEDKNELTMEWAFFEP 166
+ ACY TA L +N++ S G LVI TD + + E P
Sbjct: 110 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVY--AEGPAR---------P 158
Query: 167 SGGAGAVAMLIS-DKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNAD--LSLLSYL-- 221
+GGA A+AMLI D P +F+ + ++ + V D +P SE D LS YL
Sbjct: 159 TGGAAAIAMLIGPDAPIVFESKLRAS--HMAHVYDFYKPNLASEYPVVDGKLSQTCYLMA 216
Query: 222 -DCC 224
D C
Sbjct: 217 LDSC 220
>UNIPROTKB|P0A6R0 [details] [associations]
symbol:fabH "FabH" species:83333 "Escherichia coli K-12"
[GO:0006631 "fatty acid metabolic process" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0004315
"3-oxoacyl-[acyl-carrier-protein] synthase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0033818
"beta-ketoacyl-acyl-carrier-protein synthase III activity"
evidence=IEA;IDA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_01815
InterPro:IPR004655 InterPro:IPR013747 InterPro:IPR013751
InterPro:IPR016038 InterPro:IPR016039 Pfam:PF08541 Pfam:PF08545
UniPathway:UPA00094 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006633
Gene3D:3.40.47.10 SUPFAM:SSF53901 GO:GO:0004315 DrugBank:DB01034
EMBL:M87040 EMBL:Z11565 eggNOG:COG0332 HOGENOM:HOG000246674
KO:K00648 ProtClustDB:PRK09352 GO:GO:0033818 TIGRFAMs:TIGR00747
OMA:AHIVEET EMBL:M77744 EMBL:M96793 PIR:A42431 RefSeq:NP_415609.1
RefSeq:YP_489359.1 PDB:1EBL PDB:1HN9 PDB:1HND PDB:1HNH PDB:1HNJ
PDB:1HNK PDB:1MZS PDB:2EFT PDB:2GYO PDB:3IL9 PDBsum:1EBL
PDBsum:1HN9 PDBsum:1HND PDBsum:1HNH PDBsum:1HNJ PDBsum:1HNK
PDBsum:1MZS PDBsum:2EFT PDBsum:2GYO PDBsum:3IL9
ProteinModelPortal:P0A6R0 SMR:P0A6R0 DIP:DIP-48255N IntAct:P0A6R0
MINT:MINT-1263292 PaxDb:P0A6R0 PRIDE:P0A6R0
EnsemblBacteria:EBESCT00000004713 EnsemblBacteria:EBESCT00000017418
GeneID:12932037 GeneID:946003 KEGG:ecj:Y75_p1061 KEGG:eco:b1091
PATRIC:32117423 EchoBASE:EB0273 EcoGene:EG10277
BioCyc:EcoCyc:FABH-MONOMER BioCyc:ECOL316407:JW1077-MONOMER
BioCyc:MetaCyc:FABH-MONOMER BRENDA:2.3.1.180 BindingDB:P0A6R0
ChEMBL:CHEMBL4914 EvolutionaryTrace:P0A6R0 Genevestigator:P0A6R0
Uniprot:P0A6R0
Length = 317
Score = 120 (47.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 39 MQQKSVSLPYEDPVSFAINAAAPLIDNLSNIDKNSIELIITCSESGIDFGKSMSTYIHHY 98
++++ ++ P E + AA I+ ++ I+K+ I LI+ + S S + I
Sbjct: 39 IRERHIAAPNETVSTMGFEAATRAIE-MAGIEKDQIGLIVVATTSATHAFPSAACQIQSM 97
Query: 99 LGLNRNCRLFELKQACYSCTAGLQMAINFILSKVSPGAKALVIATDI-SRFFVTEDKNEL 157
LG+ + C F++ AC T L +A ++ K ALV+ +D+ +R D+ +
Sbjct: 98 LGI-KGCPAFDVAAACAGFTYALSVADQYV--KSGAVKYALVVGSDVLARTCDPTDRGTI 154
Query: 158 TMEWAFFEPSGGAGAVAMLISDKPEIFQFDIGSNGYYSFEVMDTCRPIPDSEAGNADLSL 217
+ F GAGA + S++P I + ++G Y E++ +P+++ N + S+
Sbjct: 155 II---F---GDGAGAAVLAASEEPGIISTHLHADGSYG-ELLT----LPNADRVNPENSI 203
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 245 0.00099 113 3 11 22 0.41 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 607 (65 KB)
Total size of DFA: 183 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.86u 0.11s 20.97t Elapsed: 00:00:03
Total cpu time: 20.87u 0.11s 20.98t Elapsed: 00:00:03
Start: Thu Aug 15 14:58:11 2013 End: Thu Aug 15 14:58:14 2013