Query psy2408
Match_columns 298
No_of_seqs 235 out of 3444
Neff 10.2
Searched_HMMs 29240
Date Sat Aug 17 00:12:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bus_A REBM, methyltransferase 100.0 4.3E-37 1.5E-41 258.8 26.4 265 30-298 4-273 (273)
2 1kpg_A CFA synthase;, cyclopro 100.0 5E-33 1.7E-37 235.6 25.6 262 27-297 4-287 (287)
3 3hem_A Cyclopropane-fatty-acyl 100.0 5.6E-33 1.9E-37 237.0 25.9 263 26-297 11-302 (302)
4 2o57_A Putative sarcosine dime 100.0 2.3E-33 7.8E-38 238.9 22.8 266 29-298 17-294 (297)
5 2fk8_A Methoxy mycolic acid sy 100.0 9.9E-32 3.4E-36 231.0 22.7 266 24-298 27-314 (318)
6 3ujc_A Phosphoethanolamine N-m 100.0 4.8E-30 1.7E-34 214.7 19.9 222 72-298 39-266 (266)
7 3f4k_A Putative methyltransfer 100.0 5.7E-28 2E-32 201.2 23.1 220 75-298 32-257 (257)
8 1nkv_A Hypothetical protein YJ 100.0 6.1E-28 2.1E-32 200.9 19.0 218 74-298 22-248 (256)
9 3kkz_A Uncharacterized protein 100.0 8.7E-27 3E-31 195.2 24.9 217 75-298 32-257 (267)
10 3vc1_A Geranyl diphosphate 2-C 100.0 5E-27 1.7E-31 201.0 20.6 210 73-298 101-312 (312)
11 4htf_A S-adenosylmethionine-de 99.9 1.2E-24 4.1E-29 183.9 18.9 164 77-242 58-234 (285)
12 1vl5_A Unknown conserved prote 99.9 1.3E-24 4.3E-29 181.3 16.7 163 77-242 26-192 (260)
13 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.1E-24 1.1E-28 178.4 18.7 159 77-238 60-243 (261)
14 3bkx_A SAM-dependent methyltra 99.9 6.8E-24 2.3E-28 178.3 20.2 227 67-295 22-273 (275)
15 2p7i_A Hypothetical protein; p 99.9 4.4E-24 1.5E-28 176.6 18.2 195 87-298 41-247 (250)
16 2yqz_A Hypothetical protein TT 99.9 1E-24 3.5E-29 182.0 13.0 165 74-243 24-199 (263)
17 3dlc_A Putative S-adenosyl-L-m 99.9 1.8E-24 6.1E-29 175.4 13.4 169 73-244 29-207 (219)
18 3ege_A Putative methyltransfer 99.9 5.6E-24 1.9E-28 177.5 14.8 156 75-241 21-179 (261)
19 3ccf_A Cyclopropane-fatty-acyl 99.9 3.2E-23 1.1E-27 174.6 19.5 156 79-242 48-212 (279)
20 1xxl_A YCGJ protein; structura 99.9 2.1E-23 7.2E-28 171.7 17.7 165 74-241 7-175 (239)
21 3hnr_A Probable methyltransfer 99.9 4.3E-24 1.5E-28 173.6 12.5 156 80-242 37-203 (220)
22 3dtn_A Putative methyltransfer 99.9 2.9E-24 9.8E-29 176.3 11.4 163 75-241 30-215 (234)
23 3l8d_A Methyltransferase; stru 99.9 5.4E-24 1.8E-28 175.5 13.0 190 32-243 13-203 (242)
24 3dh0_A SAM dependent methyltra 99.9 4.7E-23 1.6E-27 167.3 17.2 155 78-243 27-184 (219)
25 2p35_A Trans-aconitate 2-methy 99.9 1.2E-22 4.2E-27 169.0 19.5 155 75-237 20-187 (259)
26 3h2b_A SAM-dependent methyltra 99.9 1.2E-23 4.2E-28 168.8 11.9 179 33-242 3-184 (203)
27 3mgg_A Methyltransferase; NYSG 99.9 7.8E-22 2.7E-26 165.8 23.1 173 70-243 19-201 (276)
28 3dli_A Methyltransferase; PSI- 99.9 4.7E-23 1.6E-27 169.7 14.5 177 76-268 28-222 (240)
29 1xtp_A LMAJ004091AAA; SGPP, st 99.9 1.2E-22 4E-27 168.7 15.5 187 32-241 50-239 (254)
30 2ex4_A Adrenal gland protein A 99.9 3.5E-23 1.2E-27 170.6 10.6 193 31-241 30-226 (241)
31 4fsd_A Arsenic methyltransfera 99.9 1.8E-22 6E-27 177.4 15.4 152 86-239 81-250 (383)
32 1ri5_A MRNA capping enzyme; me 99.9 1.7E-21 5.7E-26 165.4 20.8 150 86-241 62-251 (298)
33 3lcc_A Putative methyl chlorid 99.9 4.6E-22 1.6E-26 163.2 15.5 154 78-246 57-213 (235)
34 3ou2_A SAM-dependent methyltra 99.9 4.1E-22 1.4E-26 161.5 14.8 185 32-243 8-208 (218)
35 1pjz_A Thiopurine S-methyltran 99.9 2.7E-22 9.1E-27 160.9 13.3 151 79-242 13-178 (203)
36 3e23_A Uncharacterized protein 99.9 4.3E-22 1.5E-26 160.7 13.5 171 31-241 9-183 (211)
37 3g5l_A Putative S-adenosylmeth 99.9 4.4E-22 1.5E-26 165.2 12.7 164 76-243 32-219 (253)
38 3jwg_A HEN1, methyltransferase 99.9 1.2E-21 4E-26 159.1 14.6 162 75-237 16-189 (219)
39 3bkw_A MLL3908 protein, S-aden 99.9 8.9E-22 3E-26 162.2 14.1 158 79-241 34-215 (243)
40 3sm3_A SAM-dependent methyltra 99.9 2.1E-21 7E-26 159.1 16.1 151 87-240 29-207 (235)
41 3i53_A O-methyltransferase; CO 99.9 6.9E-21 2.4E-25 164.2 19.7 160 79-242 160-323 (332)
42 3ocj_A Putative exported prote 99.9 1.1E-21 3.8E-26 167.3 14.3 158 86-244 116-295 (305)
43 3jwh_A HEN1; methyltransferase 99.9 8.6E-22 2.9E-26 159.7 12.5 159 77-236 18-188 (217)
44 3gu3_A Methyltransferase; alph 99.9 5.3E-21 1.8E-25 161.4 17.2 160 76-238 9-188 (284)
45 2gs9_A Hypothetical protein TT 99.9 6.9E-21 2.4E-25 153.6 16.9 175 37-242 1-181 (211)
46 3gwz_A MMCR; methyltransferase 99.9 7.9E-20 2.7E-24 159.7 23.3 162 75-240 189-356 (369)
47 3g5t_A Trans-aconitate 3-methy 99.9 1.6E-20 5.6E-25 159.6 18.5 156 75-232 24-196 (299)
48 3g2m_A PCZA361.24; SAM-depende 99.9 9.9E-22 3.4E-26 167.1 10.9 165 75-242 70-276 (299)
49 4hg2_A Methyltransferase type 99.9 1.3E-21 4.5E-26 162.0 10.4 113 75-197 28-140 (257)
50 2r3s_A Uncharacterized protein 99.9 2.9E-20 9.8E-25 160.6 19.2 165 76-243 151-326 (335)
51 1y8c_A S-adenosylmethionine-de 99.9 2.5E-21 8.5E-26 159.7 11.0 148 88-239 37-224 (246)
52 3cc8_A Putative methyltransfer 99.9 3.1E-20 1.1E-24 151.5 17.2 165 78-258 23-201 (230)
53 2aot_A HMT, histamine N-methyl 99.9 4.1E-21 1.4E-25 162.7 12.3 157 79-238 42-219 (292)
54 3i9f_A Putative type 11 methyl 99.9 3.2E-21 1.1E-25 150.2 10.6 142 80-243 9-151 (170)
55 2xvm_A Tellurite resistance pr 99.8 4.1E-20 1.4E-24 147.5 16.9 148 79-240 23-173 (199)
56 3pfg_A N-methyltransferase; N, 99.8 5.6E-20 1.9E-24 153.4 16.9 161 69-239 33-236 (263)
57 3e8s_A Putative SAM dependent 99.8 2.7E-21 9.3E-26 157.5 8.5 188 30-240 8-209 (227)
58 2gb4_A Thiopurine S-methyltran 99.8 2.9E-20 1E-24 153.6 14.4 143 86-241 66-228 (252)
59 1qzz_A RDMB, aclacinomycin-10- 99.8 1.5E-19 5E-24 158.5 19.7 161 78-243 172-342 (374)
60 3dp7_A SAM-dependent methyltra 99.8 3.9E-20 1.3E-24 161.3 15.5 152 87-240 178-342 (363)
61 3d2l_A SAM-dependent methyltra 99.8 3.7E-20 1.3E-24 152.5 14.4 131 38-193 3-138 (243)
62 2g72_A Phenylethanolamine N-me 99.8 2.6E-21 9E-26 163.7 7.6 147 88-241 71-257 (289)
63 1ve3_A Hypothetical protein PH 99.8 2.5E-20 8.7E-25 151.9 13.2 168 70-242 22-217 (227)
64 1x19_A CRTF-related protein; m 99.8 3.8E-19 1.3E-23 155.0 21.1 162 75-241 177-349 (359)
65 2avn_A Ubiquinone/menaquinone 99.8 8.7E-20 3E-24 152.0 15.0 156 75-243 43-216 (260)
66 3bxo_A N,N-dimethyltransferase 99.8 1.3E-20 4.3E-25 154.9 9.7 158 71-238 25-225 (239)
67 3mcz_A O-methyltransferase; ad 99.8 1.2E-19 4.2E-24 157.7 16.5 157 79-237 169-336 (352)
68 1vlm_A SAM-dependent methyltra 99.8 2.8E-20 9.5E-25 151.0 11.6 140 89-243 48-191 (219)
69 1tw3_A COMT, carminomycin 4-O- 99.8 2.7E-19 9.4E-24 155.9 18.2 160 78-242 173-341 (360)
70 3g07_A 7SK snRNA methylphospha 99.8 2.2E-20 7.6E-25 158.1 10.6 152 88-240 46-269 (292)
71 2ip2_A Probable phenazine-spec 99.8 2.6E-19 8.8E-24 154.5 17.4 160 76-241 156-323 (334)
72 2a14_A Indolethylamine N-methy 99.8 1.5E-20 5.1E-25 156.8 8.4 149 85-241 52-239 (263)
73 2vdw_A Vaccinia virus capping 99.8 7.8E-20 2.7E-24 155.0 12.8 154 88-241 48-247 (302)
74 2kw5_A SLR1183 protein; struct 99.8 1.4E-19 4.7E-24 145.0 13.0 148 79-242 23-173 (202)
75 3fpf_A Mtnas, putative unchara 99.8 6E-20 2.1E-24 152.8 11.0 159 27-193 61-223 (298)
76 4e2x_A TCAB9; kijanose, tetron 99.8 1.4E-21 4.7E-26 173.7 0.8 164 67-241 86-254 (416)
77 3thr_A Glycine N-methyltransfe 99.8 2.8E-19 9.5E-24 151.5 14.7 117 77-194 46-177 (293)
78 3lst_A CALO1 methyltransferase 99.8 3.4E-19 1.2E-23 154.6 15.5 157 77-239 173-335 (348)
79 2p8j_A S-adenosylmethionine-de 99.8 9.7E-20 3.3E-24 146.5 10.9 150 87-238 22-181 (209)
80 3m70_A Tellurite resistance pr 99.8 4.2E-19 1.4E-23 149.9 14.9 139 87-240 119-260 (286)
81 3orh_A Guanidinoacetate N-meth 99.8 1.8E-20 6.3E-25 153.7 5.8 145 32-192 13-170 (236)
82 4a6d_A Hydroxyindole O-methylt 99.8 3.7E-18 1.3E-22 148.1 19.5 161 76-241 167-335 (353)
83 3reo_A (ISO)eugenol O-methyltr 99.8 2.3E-18 7.9E-23 150.3 18.1 156 77-243 191-358 (368)
84 3ggd_A SAM-dependent methyltra 99.8 5.2E-19 1.8E-23 145.9 13.0 151 86-243 54-222 (245)
85 3e05_A Precorrin-6Y C5,15-meth 99.8 4.3E-18 1.5E-22 136.4 18.0 138 74-238 26-165 (204)
86 3p9c_A Caffeic acid O-methyltr 99.8 2.8E-18 9.5E-23 149.5 17.7 157 76-243 188-356 (364)
87 3cgg_A SAM-dependent methyltra 99.8 1.7E-18 5.7E-23 137.5 15.0 127 86-239 44-174 (195)
88 3njr_A Precorrin-6Y methylase; 99.8 2.9E-18 1E-22 137.4 16.5 139 74-239 41-179 (204)
89 3ofk_A Nodulation protein S; N 99.8 5.8E-19 2E-23 142.8 12.5 115 75-194 38-156 (216)
90 2i62_A Nicotinamide N-methyltr 99.8 3E-19 1E-23 148.9 11.0 150 85-242 53-241 (265)
91 3mti_A RRNA methylase; SAM-dep 99.8 2.2E-18 7.7E-23 135.9 15.2 150 76-242 11-171 (185)
92 4df3_A Fibrillarin-like rRNA/T 99.8 1E-18 3.5E-23 141.2 12.0 143 82-242 71-219 (233)
93 1zx0_A Guanidinoacetate N-meth 99.8 2E-19 6.8E-24 147.6 8.0 107 86-194 58-172 (236)
94 2qe6_A Uncharacterized protein 99.8 3.1E-18 1.1E-22 143.3 15.1 159 72-236 60-238 (274)
95 3hm2_A Precorrin-6Y C5,15-meth 99.8 3.1E-18 1.1E-22 134.1 13.5 140 73-238 10-151 (178)
96 3mq2_A 16S rRNA methyltransfer 99.8 2.3E-19 7.7E-24 145.4 6.9 159 81-245 20-189 (218)
97 1fp1_D Isoliquiritigenin 2'-O- 99.8 3.2E-18 1.1E-22 149.7 14.3 153 77-240 197-360 (372)
98 3htx_A HEN1; HEN1, small RNA m 99.8 1.1E-17 3.9E-22 154.4 17.6 120 74-195 707-837 (950)
99 3grz_A L11 mtase, ribosomal pr 99.8 3.4E-18 1.2E-22 137.2 12.4 138 74-240 48-185 (205)
100 3p2e_A 16S rRNA methylase; met 99.8 2.6E-19 8.9E-24 145.6 5.4 156 87-246 23-191 (225)
101 2ld4_A Anamorsin; methyltransf 99.8 8.9E-19 3.1E-23 137.1 8.3 158 82-298 6-168 (176)
102 3m33_A Uncharacterized protein 99.8 9.2E-18 3.2E-22 136.7 14.1 121 87-243 47-170 (226)
103 3evz_A Methyltransferase; NYSG 99.8 1.9E-17 6.6E-22 135.1 15.9 132 85-239 52-205 (230)
104 1wzn_A SAM-dependent methyltra 99.8 7.8E-18 2.7E-22 139.4 13.6 141 37-194 3-147 (252)
105 3bgv_A MRNA CAP guanine-N7 met 99.8 8.7E-18 3E-22 143.6 14.0 108 87-194 33-157 (313)
106 3uwp_A Histone-lysine N-methyl 99.8 3.8E-18 1.3E-22 147.1 11.4 172 67-239 152-336 (438)
107 3eey_A Putative rRNA methylase 99.7 1.1E-17 3.7E-22 133.3 12.5 144 85-242 19-175 (197)
108 3lpm_A Putative methyltransfer 99.7 1.8E-17 6.3E-22 137.8 14.1 113 80-192 40-176 (259)
109 3p9n_A Possible methyltransfer 99.7 6.7E-18 2.3E-22 133.7 10.8 109 87-196 43-157 (189)
110 3iv6_A Putative Zn-dependent a 99.7 1.3E-17 4.4E-22 137.6 12.7 113 76-194 33-150 (261)
111 1dus_A MJ0882; hypothetical pr 99.7 3.6E-17 1.2E-21 129.6 14.9 118 75-194 39-159 (194)
112 1fbn_A MJ fibrillarin homologu 99.7 3E-17 1E-21 134.0 14.7 144 77-242 60-215 (230)
113 2zfu_A Nucleomethylin, cerebra 99.7 2E-18 6.8E-23 139.5 7.4 159 30-241 20-180 (215)
114 2yxd_A Probable cobalt-precorr 99.7 3.7E-17 1.3E-21 128.4 13.9 134 74-238 21-155 (183)
115 1xdz_A Methyltransferase GIDB; 99.7 1E-17 3.5E-22 137.8 10.9 130 86-240 68-202 (240)
116 1fp2_A Isoflavone O-methyltran 99.7 2.8E-17 9.6E-22 142.7 14.3 145 85-240 185-341 (352)
117 3mb5_A SAM-dependent methyltra 99.7 2.6E-17 9E-22 136.5 13.3 140 76-243 81-225 (255)
118 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1E-16 3.5E-21 129.4 16.4 129 87-238 40-180 (214)
119 1l3i_A Precorrin-6Y methyltran 99.7 3.2E-17 1.1E-21 129.7 12.4 136 74-236 19-156 (192)
120 2b3t_A Protein methyltransfera 99.7 1E-16 3.5E-21 134.5 16.1 141 72-238 94-261 (276)
121 3lbf_A Protein-L-isoaspartate 99.7 6.1E-17 2.1E-21 130.3 14.0 114 74-194 63-176 (210)
122 2frn_A Hypothetical protein PH 99.7 5.6E-17 1.9E-21 136.1 14.2 137 77-236 116-253 (278)
123 3giw_A Protein of unknown func 99.7 5E-18 1.7E-22 139.7 7.5 164 70-236 59-243 (277)
124 2pwy_A TRNA (adenine-N(1)-)-me 99.7 6E-17 2E-21 134.5 13.9 136 77-240 85-224 (258)
125 2pxx_A Uncharacterized protein 99.7 3.9E-17 1.3E-21 131.7 12.3 114 76-194 32-161 (215)
126 2fyt_A Protein arginine N-meth 99.7 6.9E-17 2.4E-21 139.3 14.5 114 75-189 51-168 (340)
127 1yb2_A Hypothetical protein TA 99.7 2.9E-17 9.8E-22 137.8 11.5 136 77-241 99-238 (275)
128 3id6_C Fibrillarin-like rRNA/T 99.7 5E-16 1.7E-20 125.8 18.0 149 74-241 59-217 (232)
129 3bzb_A Uncharacterized protein 99.7 3.2E-16 1.1E-20 131.7 17.0 150 72-239 63-236 (281)
130 3dxy_A TRNA (guanine-N(7)-)-me 99.7 3E-17 1E-21 132.7 9.7 106 88-194 34-152 (218)
131 2fca_A TRNA (guanine-N(7)-)-me 99.7 2E-16 6.8E-21 127.6 14.5 128 87-237 37-176 (213)
132 2ift_A Putative methylase HI07 99.7 3.1E-17 1E-21 131.1 9.4 107 88-195 53-166 (201)
133 3q7e_A Protein arginine N-meth 99.7 8E-17 2.7E-21 139.4 12.5 113 78-191 56-172 (349)
134 2esr_A Methyltransferase; stru 99.7 2.1E-17 7.2E-22 129.3 7.9 123 72-195 14-141 (177)
135 1nt2_A Fibrillarin-like PRE-rR 99.7 3.2E-16 1.1E-20 125.9 15.0 103 84-192 53-161 (210)
136 1zg3_A Isoflavanone 4'-O-methy 99.7 9.8E-17 3.3E-21 139.6 12.9 152 79-241 182-348 (358)
137 3fzg_A 16S rRNA methylase; met 99.7 3E-17 1E-21 126.7 8.4 116 72-192 35-152 (200)
138 3q87_B N6 adenine specific DNA 99.7 1.2E-16 4.3E-21 124.1 12.0 118 87-240 22-149 (170)
139 2ipx_A RRNA 2'-O-methyltransfe 99.7 9.6E-17 3.3E-21 131.3 11.5 143 81-242 70-219 (233)
140 2h00_A Methyltransferase 10 do 99.7 4.5E-17 1.5E-21 135.0 9.7 164 72-242 47-240 (254)
141 1o54_A SAM-dependent O-methylt 99.7 2.3E-16 7.9E-21 132.4 13.8 138 77-242 101-241 (277)
142 2y1w_A Histone-arginine methyl 99.7 1.4E-16 4.8E-21 137.9 12.7 117 74-192 36-155 (348)
143 2b25_A Hypothetical protein; s 99.7 2E-16 6.8E-21 136.5 13.6 157 77-241 94-282 (336)
144 3g89_A Ribosomal RNA small sub 99.7 6.9E-17 2.4E-21 133.2 10.2 130 86-240 78-212 (249)
145 2nxc_A L11 mtase, ribosomal pr 99.7 1.2E-16 4.1E-21 132.3 11.6 126 86-240 118-244 (254)
146 3r0q_C Probable protein argini 99.7 1.8E-16 6.1E-21 138.6 13.0 118 73-193 48-170 (376)
147 3dr5_A Putative O-methyltransf 99.7 8E-17 2.7E-21 130.5 9.8 125 70-197 38-168 (221)
148 2fhp_A Methylase, putative; al 99.7 1.3E-16 4.3E-21 125.9 10.6 121 74-195 29-157 (187)
149 3u81_A Catechol O-methyltransf 99.7 6.6E-17 2.3E-21 131.2 9.0 119 73-195 46-173 (221)
150 1g6q_1 HnRNP arginine N-methyl 99.7 3E-16 1E-20 134.7 12.7 114 76-190 26-143 (328)
151 1u2z_A Histone-lysine N-methyl 99.7 4.5E-16 1.5E-20 136.8 13.9 121 74-195 228-362 (433)
152 3lec_A NADB-rossmann superfami 99.7 8.6E-16 2.9E-20 123.6 14.4 131 79-238 14-147 (230)
153 2fpo_A Methylase YHHF; structu 99.7 1.4E-16 4.9E-21 127.3 9.8 119 74-194 39-162 (202)
154 4azs_A Methyltransferase WBDD; 99.7 1.5E-16 5E-21 146.4 11.0 156 31-195 14-176 (569)
155 3dmg_A Probable ribosomal RNA 99.7 6.1E-16 2.1E-20 134.9 14.4 156 70-243 213-376 (381)
156 1vbf_A 231AA long hypothetical 99.7 5E-16 1.7E-20 126.8 13.0 112 74-194 56-167 (231)
157 3ntv_A MW1564 protein; rossman 99.7 2.5E-16 8.4E-21 128.7 10.9 108 87-197 70-181 (232)
158 1dl5_A Protein-L-isoaspartate 99.7 4.4E-16 1.5E-20 133.2 12.7 115 74-194 61-177 (317)
159 2yxe_A Protein-L-isoaspartate 99.7 8.8E-16 3E-20 123.9 13.8 115 74-194 63-179 (215)
160 4dcm_A Ribosomal RNA large sub 99.7 9.7E-16 3.3E-20 133.5 14.1 119 75-194 209-336 (375)
161 1p91_A Ribosomal RNA large sub 99.7 7.2E-16 2.5E-20 128.8 12.8 150 73-245 71-221 (269)
162 3b3j_A Histone-arginine methyl 99.7 4.8E-16 1.6E-20 139.5 12.3 117 73-191 143-262 (480)
163 1i9g_A Hypothetical protein RV 99.7 8.3E-16 2.8E-20 129.2 13.1 114 76-194 87-205 (280)
164 3kr9_A SAM-dependent methyltra 99.7 1.6E-15 5.4E-20 121.9 14.0 124 87-238 14-141 (225)
165 2yvl_A TRMI protein, hypotheti 99.7 2.6E-15 8.8E-20 123.8 15.5 112 77-194 80-192 (248)
166 3gnl_A Uncharacterized protein 99.7 1.5E-15 5.1E-20 123.2 13.6 131 79-238 14-147 (244)
167 1af7_A Chemotaxis receptor met 99.7 1.1E-15 3.6E-20 127.2 12.7 104 88-191 105-251 (274)
168 3tfw_A Putative O-methyltransf 99.7 5E-16 1.7E-20 128.2 10.7 117 74-196 52-174 (248)
169 1jsx_A Glucose-inhibited divis 99.7 6.5E-16 2.2E-20 123.9 10.9 99 88-192 65-165 (207)
170 1g8a_A Fibrillarin-like PRE-rR 99.6 6E-15 2.1E-19 120.0 16.6 147 76-242 58-214 (227)
171 4dzr_A Protein-(glutamine-N5) 99.6 5.2E-17 1.8E-21 130.9 4.2 142 73-239 14-191 (215)
172 3gdh_A Trimethylguanosine synt 99.6 1.2E-17 4E-22 137.4 0.3 138 88-239 78-218 (241)
173 2gpy_A O-methyltransferase; st 99.6 5.8E-16 2E-20 126.6 10.2 109 86-197 52-165 (233)
174 1jg1_A PIMT;, protein-L-isoasp 99.6 2E-15 6.9E-20 123.5 13.2 114 74-194 77-191 (235)
175 1ixk_A Methyltransferase; open 99.6 1.3E-15 4.3E-20 130.0 12.4 141 77-237 107-272 (315)
176 3tma_A Methyltransferase; thum 99.6 4.6E-15 1.6E-19 128.8 15.9 120 74-194 189-319 (354)
177 2ozv_A Hypothetical protein AT 99.6 1.4E-15 4.9E-20 126.3 11.8 113 80-192 28-170 (260)
178 1i1n_A Protein-L-isoaspartate 99.6 4E-15 1.4E-19 121.0 14.1 112 78-194 65-184 (226)
179 1o9g_A RRNA methyltransferase; 99.6 2.4E-15 8.1E-20 124.3 12.2 121 74-194 37-216 (250)
180 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.5E-15 8.5E-20 122.8 11.9 106 87-193 45-169 (235)
181 1ws6_A Methyltransferase; stru 99.6 2.9E-16 1E-20 121.9 5.8 103 88-195 41-150 (171)
182 3duw_A OMT, O-methyltransferas 99.6 1.2E-15 4E-20 123.9 9.1 119 72-196 45-171 (223)
183 3c3p_A Methyltransferase; NP_9 99.6 2.7E-15 9.1E-20 120.7 10.5 117 73-196 44-164 (210)
184 1nv8_A HEMK protein; class I a 99.6 4.1E-15 1.4E-19 124.9 11.8 116 73-191 108-248 (284)
185 2pjd_A Ribosomal RNA small sub 99.6 3.8E-15 1.3E-19 128.7 11.9 116 75-194 183-305 (343)
186 3bwc_A Spermidine synthase; SA 99.6 1.9E-15 6.4E-20 128.3 9.5 136 87-240 94-240 (304)
187 3r3h_A O-methyltransferase, SA 99.6 1.8E-16 6.1E-21 130.3 3.1 121 71-197 46-175 (242)
188 3tm4_A TRNA (guanine N2-)-meth 99.6 7.9E-15 2.7E-19 128.0 13.7 140 74-241 204-353 (373)
189 3tr6_A O-methyltransferase; ce 99.6 9.1E-16 3.1E-20 124.7 7.1 119 73-197 52-179 (225)
190 3hp7_A Hemolysin, putative; st 99.6 3.9E-16 1.3E-20 130.2 4.9 153 78-241 74-233 (291)
191 2pbf_A Protein-L-isoaspartate 99.6 4.9E-15 1.7E-19 120.5 11.4 112 78-194 68-195 (227)
192 4hc4_A Protein arginine N-meth 99.6 4.3E-15 1.5E-19 128.6 11.3 101 87-190 82-187 (376)
193 2igt_A SAM dependent methyltra 99.6 4E-15 1.4E-19 127.5 11.0 107 87-194 152-274 (332)
194 1r18_A Protein-L-isoaspartate( 99.6 5.2E-15 1.8E-19 120.5 10.5 113 76-194 70-196 (227)
195 3k6r_A Putative transferase PH 99.6 1.8E-14 6.3E-19 119.6 13.8 135 78-235 117-252 (278)
196 1sui_A Caffeoyl-COA O-methyltr 99.6 2.2E-15 7.6E-20 124.1 7.5 120 71-196 65-194 (247)
197 2hnk_A SAM-dependent O-methylt 99.6 5.6E-15 1.9E-19 121.2 9.1 107 87-196 59-185 (239)
198 1zq9_A Probable dimethyladenos 99.6 6.9E-15 2.4E-19 123.6 9.3 113 74-189 14-144 (285)
199 3cbg_A O-methyltransferase; cy 99.6 6.3E-15 2.1E-19 120.4 8.4 119 73-197 60-187 (232)
200 2vdv_E TRNA (guanine-N(7)-)-me 99.6 2.5E-14 8.6E-19 117.8 12.1 105 87-192 48-173 (246)
201 2yxl_A PH0851 protein, 450AA l 99.6 6.6E-14 2.3E-18 125.1 15.4 119 77-196 248-393 (450)
202 3opn_A Putative hemolysin; str 99.6 1.1E-15 3.7E-20 124.5 3.5 151 78-241 26-185 (232)
203 3sso_A Methyltransferase; macr 99.6 8.7E-15 3E-19 126.0 9.2 107 76-194 205-326 (419)
204 2bm8_A Cephalosporin hydroxyla 99.6 3.5E-15 1.2E-19 122.1 6.2 107 75-193 71-188 (236)
205 3ajd_A Putative methyltransfer 99.6 3.3E-14 1.1E-18 119.0 12.1 116 81-197 76-216 (274)
206 1ej0_A FTSJ; methyltransferase 99.5 1.4E-14 4.8E-19 112.9 9.0 104 79-194 12-138 (180)
207 2avd_A Catechol-O-methyltransf 99.5 8.3E-15 2.8E-19 119.3 7.5 107 87-196 68-183 (229)
208 3a27_A TYW2, uncharacterized p 99.5 3.9E-14 1.3E-18 118.3 11.7 105 86-196 117-223 (272)
209 1wy7_A Hypothetical protein PH 99.5 1.7E-13 5.8E-18 109.7 14.7 129 85-242 46-177 (207)
210 3c3y_A Pfomt, O-methyltransfer 99.5 1.5E-14 5.2E-19 118.4 8.2 119 72-196 57-185 (237)
211 3lcv_B Sisomicin-gentamicin re 99.5 1E-13 3.5E-18 112.0 12.7 147 74-238 120-270 (281)
212 2plw_A Ribosomal RNA methyltra 99.5 5E-14 1.7E-18 112.3 10.9 97 86-194 20-156 (201)
213 2qm3_A Predicted methyltransfe 99.5 3.2E-13 1.1E-17 117.9 15.2 102 87-190 171-275 (373)
214 1ne2_A Hypothetical protein TA 99.5 2.8E-13 9.7E-18 107.9 13.7 89 85-182 48-139 (200)
215 3adn_A Spermidine synthase; am 99.5 1.8E-13 6.2E-18 115.2 12.3 107 87-193 82-199 (294)
216 2frx_A Hypothetical protein YE 99.5 2.3E-13 7.9E-18 121.9 13.6 116 82-198 109-252 (479)
217 3gjy_A Spermidine synthase; AP 99.5 9.1E-14 3.1E-18 117.2 9.4 105 89-194 90-202 (317)
218 2b78_A Hypothetical protein SM 99.5 1.9E-13 6.6E-18 119.6 11.6 138 87-241 211-363 (385)
219 3frh_A 16S rRNA methylase; met 99.5 5.1E-13 1.7E-17 107.0 12.0 101 87-192 104-206 (253)
220 3m6w_A RRNA methylase; rRNA me 99.5 2.1E-13 7.1E-18 121.1 10.6 116 80-197 93-234 (464)
221 1xj5_A Spermidine synthase 1; 99.5 1.3E-13 4.4E-18 118.1 8.9 107 86-192 118-235 (334)
222 2o07_A Spermidine synthase; st 99.5 1.1E-13 3.8E-18 117.2 8.4 108 87-194 94-211 (304)
223 1sqg_A SUN protein, FMU protei 99.5 4.6E-13 1.6E-17 119.0 12.7 122 74-197 232-379 (429)
224 2h1r_A Dimethyladenosine trans 99.5 4.5E-13 1.5E-17 113.3 11.4 108 74-186 28-153 (299)
225 3m4x_A NOL1/NOP2/SUN family pr 99.4 1.5E-13 5.3E-18 121.8 8.8 117 80-197 97-239 (456)
226 2nyu_A Putative ribosomal RNA 99.4 4.6E-13 1.6E-17 106.2 10.7 98 85-194 19-147 (196)
227 2oxt_A Nucleoside-2'-O-methylt 99.4 2.8E-14 9.6E-19 118.3 3.6 111 78-194 64-187 (265)
228 2wa2_A Non-structural protein 99.4 2.8E-14 9.7E-19 119.0 3.5 111 78-194 72-195 (276)
229 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.8E-12 6.1E-17 115.3 15.3 143 71-241 269-415 (433)
230 3dou_A Ribosomal RNA large sub 99.4 1.9E-13 6.7E-18 107.9 8.0 108 74-194 11-141 (191)
231 2as0_A Hypothetical protein PH 99.4 2.5E-13 8.7E-18 119.6 8.8 108 87-194 216-337 (396)
232 3c0k_A UPF0064 protein YCCW; P 99.4 4.5E-13 1.5E-17 118.0 10.4 108 87-194 219-341 (396)
233 3v97_A Ribosomal RNA large sub 99.4 3.4E-13 1.1E-17 126.4 9.8 107 87-194 538-659 (703)
234 1iy9_A Spermidine synthase; ro 99.4 3.9E-13 1.3E-17 112.3 9.2 106 88-193 75-190 (275)
235 1uir_A Polyamine aminopropyltr 99.4 2E-13 6.7E-18 116.3 7.4 107 87-193 76-196 (314)
236 1inl_A Spermidine synthase; be 99.4 3.2E-13 1.1E-17 114.1 8.6 107 87-193 89-206 (296)
237 4dmg_A Putative uncharacterize 99.4 1.1E-12 3.7E-17 114.7 11.4 105 87-194 213-328 (393)
238 1wxx_A TT1595, hypothetical pr 99.4 2.4E-13 8.1E-18 119.1 7.1 105 88-194 209-327 (382)
239 2b2c_A Spermidine synthase; be 99.4 1.8E-13 6E-18 116.3 6.1 106 87-192 107-222 (314)
240 2pt6_A Spermidine synthase; tr 99.4 2.5E-13 8.6E-18 115.9 6.9 108 87-194 115-232 (321)
241 1mjf_A Spermidine synthase; sp 99.4 2.1E-13 7E-18 114.5 6.1 105 87-193 74-194 (281)
242 2yx1_A Hypothetical protein MJ 99.4 1.1E-12 3.6E-17 112.9 10.5 106 79-195 188-294 (336)
243 1qam_A ERMC' methyltransferase 99.4 2.7E-13 9.3E-18 111.3 6.1 84 74-162 16-100 (244)
244 2i7c_A Spermidine synthase; tr 99.4 5.3E-13 1.8E-17 112.0 7.6 108 87-194 77-194 (283)
245 2f8l_A Hypothetical protein LM 99.4 3.2E-12 1.1E-16 110.4 11.7 114 78-194 119-258 (344)
246 2cmg_A Spermidine synthase; tr 99.4 4.1E-13 1.4E-17 111.2 5.8 97 87-192 71-171 (262)
247 3gru_A Dimethyladenosine trans 99.4 4.1E-12 1.4E-16 106.5 11.1 89 74-166 36-124 (295)
248 3k0b_A Predicted N6-adenine-sp 99.4 1.1E-11 3.6E-16 108.5 14.0 120 74-194 187-352 (393)
249 2jjq_A Uncharacterized RNA met 99.4 1.7E-11 5.7E-16 108.4 15.3 111 72-192 277-387 (425)
250 3ldg_A Putative uncharacterize 99.4 2.5E-11 8.5E-16 105.7 16.0 120 74-194 180-345 (384)
251 1yub_A Ermam, rRNA methyltrans 99.3 6.9E-15 2.4E-19 121.1 -7.5 114 76-194 17-147 (245)
252 3ldu_A Putative methylase; str 99.3 2E-11 6.7E-16 106.7 13.9 120 74-194 181-346 (385)
253 2p41_A Type II methyltransfera 99.3 1.4E-12 4.7E-17 110.4 6.4 108 80-194 74-193 (305)
254 2xyq_A Putative 2'-O-methyl tr 99.3 5.3E-12 1.8E-16 105.5 9.3 95 83-194 58-173 (290)
255 2okc_A Type I restriction enzy 99.3 1.7E-11 5.9E-16 109.4 12.9 120 74-194 157-309 (445)
256 3tqs_A Ribosomal RNA small sub 99.3 2E-11 6.7E-16 100.5 10.3 85 74-163 15-103 (255)
257 3bt7_A TRNA (uracil-5-)-methyl 99.3 2.6E-11 9E-16 105.6 10.7 115 72-194 198-328 (369)
258 3fut_A Dimethyladenosine trans 99.3 2.1E-11 7.3E-16 101.0 9.5 97 74-177 33-133 (271)
259 2ih2_A Modification methylase 99.2 1.8E-11 6.3E-16 108.6 9.3 110 74-194 25-166 (421)
260 2b9e_A NOL1/NOP2/SUN domain fa 99.2 1.2E-10 4E-15 98.6 13.7 115 80-196 94-238 (309)
261 3b5i_A S-adenosyl-L-methionine 99.2 4.6E-09 1.6E-13 90.6 22.8 168 74-241 33-299 (374)
262 2efj_A 3,7-dimethylxanthine me 99.2 1.1E-09 3.7E-14 94.7 16.4 149 89-240 53-292 (384)
263 1m6y_A S-adenosyl-methyltransf 99.2 3.6E-11 1.2E-15 101.2 7.0 86 77-164 15-106 (301)
264 3axs_A Probable N(2),N(2)-dime 99.2 6.8E-11 2.3E-15 102.9 8.2 102 87-192 51-158 (392)
265 2dul_A N(2),N(2)-dimethylguano 99.1 1.6E-10 5.4E-15 100.5 9.2 100 88-192 47-164 (378)
266 3v97_A Ribosomal RNA large sub 99.1 4.3E-10 1.5E-14 105.4 12.7 121 74-194 176-349 (703)
267 2qfm_A Spermine synthase; sper 99.1 7.9E-11 2.7E-15 100.5 6.9 107 88-194 188-316 (364)
268 2r6z_A UPF0341 protein in RSP 99.1 1.1E-11 3.6E-16 102.4 1.4 84 84-168 79-173 (258)
269 2ar0_A M.ecoki, type I restric 99.1 4E-10 1.4E-14 102.6 11.2 121 74-194 155-314 (541)
270 3ftd_A Dimethyladenosine trans 99.1 5.1E-10 1.7E-14 91.9 10.1 76 74-154 17-92 (249)
271 3cvo_A Methyltransferase-like 99.1 1.4E-09 4.7E-14 85.6 11.8 100 88-193 30-155 (202)
272 3uzu_A Ribosomal RNA small sub 99.1 3.5E-10 1.2E-14 94.2 8.5 74 74-153 28-105 (279)
273 4gqb_A Protein arginine N-meth 99.0 2.3E-09 8E-14 98.1 13.5 119 69-189 334-464 (637)
274 3khk_A Type I restriction-modi 99.0 8.4E-10 2.9E-14 100.3 10.2 120 74-194 231-397 (544)
275 2oyr_A UPF0341 protein YHIQ; a 99.0 2.7E-10 9.1E-15 93.6 5.1 108 78-186 76-194 (258)
276 1m6e_X S-adenosyl-L-methionnin 99.0 4.4E-09 1.5E-13 90.1 11.9 152 88-239 51-279 (359)
277 3ll7_A Putative methyltransfer 99.0 6E-10 2.1E-14 97.1 6.3 75 87-163 92-170 (410)
278 3lkd_A Type I restriction-modi 99.0 6.5E-09 2.2E-13 94.3 13.2 120 75-194 204-360 (542)
279 1qyr_A KSGA, high level kasuga 99.0 4.3E-10 1.5E-14 92.4 5.0 92 74-172 7-105 (252)
280 3o4f_A Spermidine synthase; am 98.9 1.9E-08 6.6E-13 83.5 13.5 108 87-194 82-200 (294)
281 3ua3_A Protein arginine N-meth 98.9 5.2E-09 1.8E-13 95.8 8.9 100 89-189 410-531 (745)
282 3evf_A RNA-directed RNA polyme 98.8 3.4E-09 1.2E-13 86.3 6.1 118 72-194 59-186 (277)
283 2qy6_A UPF0209 protein YFCK; s 98.8 4.4E-09 1.5E-13 86.5 6.6 129 87-241 59-236 (257)
284 4fzv_A Putative methyltransfer 98.7 4.3E-08 1.5E-12 84.2 10.1 121 80-200 140-292 (359)
285 1wg8_A Predicted S-adenosylmet 98.7 5E-08 1.7E-12 80.0 8.0 83 76-164 10-97 (285)
286 2wk1_A NOVP; transferase, O-me 98.7 1.2E-07 4.1E-12 78.6 10.0 105 88-194 106-246 (282)
287 2k4m_A TR8_protein, UPF0146 pr 98.6 5E-08 1.7E-12 71.4 6.4 102 73-196 22-125 (153)
288 3gcz_A Polyprotein; flavivirus 98.6 2.7E-08 9.1E-13 81.2 4.8 118 72-194 75-203 (282)
289 3s1s_A Restriction endonucleas 98.6 2.6E-07 8.9E-12 86.0 11.3 107 87-194 320-467 (878)
290 4auk_A Ribosomal RNA large sub 98.5 6.2E-07 2.1E-11 76.5 9.6 121 86-233 209-333 (375)
291 3ufb_A Type I restriction-modi 98.4 4.6E-06 1.6E-10 75.7 14.3 120 74-194 203-364 (530)
292 3lkz_A Non-structural protein 98.4 4E-06 1.4E-10 68.5 11.8 118 72-195 79-207 (321)
293 3c6k_A Spermine synthase; sper 98.4 4.3E-07 1.5E-11 77.8 6.3 106 87-192 204-331 (381)
294 1rjd_A PPM1P, carboxy methyl t 98.3 1.4E-05 4.7E-10 68.2 14.7 155 74-233 86-281 (334)
295 3eld_A Methyltransferase; flav 98.3 1.3E-06 4.4E-11 71.8 7.2 106 85-194 78-193 (300)
296 2zig_A TTHA0409, putative modi 98.3 3.4E-06 1.2E-10 70.9 9.8 60 74-135 222-281 (297)
297 2vz8_A Fatty acid synthase; tr 98.2 2.2E-07 7.6E-12 97.9 0.9 145 87-237 1239-1392(2512)
298 3p8z_A Mtase, non-structural p 98.2 2E-05 6.7E-10 62.4 11.5 112 78-195 68-189 (267)
299 2px2_A Genome polyprotein [con 98.1 2.1E-05 7.2E-10 63.2 10.1 114 72-194 58-185 (269)
300 2uyo_A Hypothetical protein ML 97.9 0.00066 2.2E-08 57.1 16.3 143 90-235 104-274 (310)
301 1g60_A Adenine-specific methyl 97.9 5E-05 1.7E-09 62.5 8.4 60 74-135 199-258 (260)
302 3tka_A Ribosomal RNA small sub 97.8 2.2E-05 7.4E-10 66.0 5.4 86 76-166 45-138 (347)
303 1i4w_A Mitochondrial replicati 97.8 6.3E-05 2.2E-09 64.3 8.2 73 74-150 38-117 (353)
304 3iei_A Leucine carboxyl methyl 97.8 0.013 4.6E-07 49.6 21.9 163 73-240 77-281 (334)
305 3vyw_A MNMC2; tRNA wobble urid 97.6 0.00031 1.1E-08 58.5 9.3 146 69-241 75-249 (308)
306 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00026 8.8E-09 57.9 6.5 106 75-196 95-221 (344)
307 1f8f_A Benzyl alcohol dehydrog 97.4 0.0011 3.9E-08 57.2 10.5 103 79-193 181-290 (371)
308 2dph_A Formaldehyde dismutase; 97.3 0.00052 1.8E-08 60.1 7.8 104 82-193 179-300 (398)
309 1kol_A Formaldehyde dehydrogen 97.1 0.0023 7.9E-08 55.9 9.7 104 82-193 179-301 (398)
310 4ej6_A Putative zinc-binding d 97.1 0.0026 8.9E-08 55.0 9.8 102 81-194 175-286 (370)
311 3fpc_A NADP-dependent alcohol 97.1 0.0014 4.7E-08 56.3 7.8 102 81-194 159-268 (352)
312 3two_A Mannitol dehydrogenase; 97.1 0.00093 3.2E-08 57.3 6.6 99 80-194 168-267 (348)
313 3s2e_A Zinc-containing alcohol 97.0 0.0023 7.9E-08 54.6 8.7 102 80-193 158-264 (340)
314 3m6i_A L-arabinitol 4-dehydrog 97.0 0.011 3.9E-07 50.7 13.0 104 81-194 172-285 (363)
315 1pqw_A Polyketide synthase; ro 97.0 0.0049 1.7E-07 48.0 9.6 96 82-192 32-137 (198)
316 1pl8_A Human sorbitol dehydrog 96.9 0.0026 8.9E-08 54.7 8.2 101 81-193 164-274 (356)
317 3jyn_A Quinone oxidoreductase; 96.9 0.0079 2.7E-07 50.9 11.0 102 80-194 132-241 (325)
318 3uog_A Alcohol dehydrogenase; 96.9 0.0037 1.3E-07 53.8 8.9 101 81-194 182-289 (363)
319 3uko_A Alcohol dehydrogenase c 96.9 0.0026 8.8E-08 55.2 7.8 103 80-194 185-297 (378)
320 3goh_A Alcohol dehydrogenase, 96.9 0.0025 8.5E-08 53.7 7.5 94 81-192 135-229 (315)
321 1e3j_A NADP(H)-dependent ketos 96.8 0.0068 2.3E-07 51.9 9.8 101 81-193 161-272 (352)
322 3gms_A Putative NADPH:quinone 96.8 0.0042 1.4E-07 53.0 8.4 104 78-194 134-245 (340)
323 1uuf_A YAHK, zinc-type alcohol 96.8 0.0027 9.1E-08 54.9 7.0 100 81-193 187-289 (369)
324 2py6_A Methyltransferase FKBM; 96.7 0.0052 1.8E-07 53.9 8.6 64 86-149 224-293 (409)
325 1boo_A Protein (N-4 cytosine-s 96.7 0.0031 1.1E-07 53.4 6.8 60 75-136 240-299 (323)
326 2h6e_A ADH-4, D-arabinose 1-de 96.7 0.0015 5.1E-08 55.9 4.5 95 85-193 168-270 (344)
327 3qwb_A Probable quinone oxidor 96.7 0.013 4.3E-07 49.8 10.3 99 82-193 142-248 (334)
328 3tos_A CALS11; methyltransfera 96.6 0.01 3.5E-07 48.2 8.9 105 90-195 71-220 (257)
329 4b7c_A Probable oxidoreductase 96.6 0.0077 2.6E-07 51.2 8.7 104 78-193 139-249 (336)
330 3ip1_A Alcohol dehydrogenase, 96.6 0.011 3.9E-07 51.6 10.0 98 85-194 210-320 (404)
331 1p0f_A NADP-dependent alcohol 96.6 0.0058 2E-07 52.8 8.0 102 80-193 183-294 (373)
332 1jvb_A NAD(H)-dependent alcoho 96.6 0.015 5.2E-07 49.6 10.6 101 81-193 163-272 (347)
333 4eye_A Probable oxidoreductase 96.6 0.0087 3E-07 51.0 8.7 100 80-193 151-258 (342)
334 2oo3_A Protein involved in cat 96.6 0.0012 4E-08 54.3 3.0 101 89-193 92-199 (283)
335 2fzw_A Alcohol dehydrogenase c 96.6 0.0083 2.8E-07 51.8 8.6 102 80-193 182-293 (373)
336 2d8a_A PH0655, probable L-thre 96.5 0.01 3.6E-07 50.6 8.9 100 81-193 161-268 (348)
337 1eg2_A Modification methylase 96.5 0.0048 1.6E-07 52.1 6.5 60 74-135 229-291 (319)
338 1e3i_A Alcohol dehydrogenase, 96.5 0.0084 2.9E-07 51.8 8.3 102 80-193 187-298 (376)
339 1g55_A DNA cytosine methyltran 96.5 0.0048 1.6E-07 52.7 6.5 69 90-165 3-77 (343)
340 4dvj_A Putative zinc-dependent 96.5 0.026 9.1E-07 48.5 11.3 99 80-191 158-269 (363)
341 1rjw_A ADH-HT, alcohol dehydro 96.5 0.0064 2.2E-07 51.8 7.2 98 82-193 158-262 (339)
342 1cdo_A Alcohol dehydrogenase; 96.5 0.0093 3.2E-07 51.5 8.4 102 80-193 184-295 (374)
343 1v3u_A Leukotriene B4 12- hydr 96.4 0.014 4.9E-07 49.4 9.2 99 80-193 137-245 (333)
344 2jhf_A Alcohol dehydrogenase E 96.4 0.0091 3.1E-07 51.6 8.0 102 80-193 183-294 (374)
345 1vj0_A Alcohol dehydrogenase, 96.4 0.0076 2.6E-07 52.2 7.5 101 81-193 187-299 (380)
346 3nx4_A Putative oxidoreductase 96.4 0.0055 1.9E-07 51.8 6.1 99 82-193 139-242 (324)
347 3tqh_A Quinone oxidoreductase; 96.3 0.02 6.9E-07 48.3 9.3 98 80-191 144-244 (321)
348 3fbg_A Putative arginate lyase 96.3 0.026 8.9E-07 48.1 10.1 100 79-191 135-247 (346)
349 2c0c_A Zinc binding alcohol de 96.3 0.02 7E-07 49.1 9.4 100 81-193 156-262 (362)
350 4eez_A Alcohol dehydrogenase 1 96.3 0.0061 2.1E-07 52.0 6.1 102 80-193 155-264 (348)
351 3jv7_A ADH-A; dehydrogenase, n 96.3 0.01 3.6E-07 50.6 7.5 97 85-194 168-272 (345)
352 2b5w_A Glucose dehydrogenase; 96.3 0.0051 1.8E-07 52.8 5.6 97 82-193 160-274 (357)
353 4dup_A Quinone oxidoreductase; 96.3 0.017 5.9E-07 49.4 8.8 100 81-193 160-266 (353)
354 1piw_A Hypothetical zinc-type 96.2 0.0091 3.1E-07 51.3 7.0 102 81-193 172-277 (360)
355 3qv2_A 5-cytosine DNA methyltr 96.2 0.025 8.6E-07 47.8 9.3 88 88-183 9-117 (327)
356 2eih_A Alcohol dehydrogenase; 96.2 0.031 1.1E-06 47.5 9.9 95 84-193 162-266 (343)
357 1yb5_A Quinone oxidoreductase; 96.1 0.028 9.6E-07 48.0 9.5 98 82-192 164-269 (351)
358 3krt_A Crotonyl COA reductase; 96.1 0.027 9.3E-07 50.0 9.7 97 84-193 224-345 (456)
359 2j3h_A NADP-dependent oxidored 96.1 0.03 1E-06 47.6 9.7 101 80-192 147-255 (345)
360 3pvc_A TRNA 5-methylaminomethy 96.1 0.015 5E-07 54.6 8.2 125 88-238 58-231 (689)
361 3g7u_A Cytosine-specific methy 96.1 0.021 7.1E-07 49.4 8.5 70 90-166 3-81 (376)
362 1qor_A Quinone oxidoreductase; 96.1 0.034 1.2E-06 46.9 9.7 99 82-193 134-240 (327)
363 1zkd_A DUF185; NESG, RPR58, st 96.1 0.064 2.2E-06 46.2 11.3 65 68-132 60-132 (387)
364 3ps9_A TRNA 5-methylaminomethy 96.1 0.02 7E-07 53.5 9.0 125 88-238 66-239 (676)
365 2j8z_A Quinone oxidoreductase; 96.1 0.033 1.1E-06 47.7 9.6 99 82-193 156-262 (354)
366 2dq4_A L-threonine 3-dehydroge 96.1 0.00076 2.6E-08 57.7 -0.8 97 83-193 160-263 (343)
367 2hcy_A Alcohol dehydrogenase 1 96.0 0.012 4E-07 50.3 6.5 100 80-193 161-270 (347)
368 4a2c_A Galactitol-1-phosphate 96.0 0.055 1.9E-06 46.0 10.4 106 77-194 149-262 (346)
369 1wly_A CAAR, 2-haloacrylate re 95.9 0.063 2.2E-06 45.4 10.7 97 82-193 139-245 (333)
370 2zwa_A Leucine carboxyl methyl 95.9 0.66 2.3E-05 43.4 18.3 164 72-239 91-308 (695)
371 2cdc_A Glucose dehydrogenase g 95.9 0.023 7.7E-07 48.9 7.8 94 83-193 166-279 (366)
372 3gaz_A Alcohol dehydrogenase s 95.9 0.041 1.4E-06 46.8 9.2 96 81-192 143-246 (343)
373 1tt7_A YHFP; alcohol dehydroge 95.8 0.01 3.4E-07 50.3 5.0 102 82-193 143-248 (330)
374 1xa0_A Putative NADPH dependen 95.7 0.011 3.6E-07 50.1 4.7 99 82-193 142-247 (328)
375 2cf5_A Atccad5, CAD, cinnamyl 95.3 0.0088 3E-07 51.3 2.9 101 81-193 172-276 (357)
376 4a0s_A Octenoyl-COA reductase/ 95.2 0.061 2.1E-06 47.5 8.2 100 84-193 216-337 (447)
377 3fwz_A Inner membrane protein 95.1 0.16 5.3E-06 37.0 9.0 90 89-191 7-104 (140)
378 2c7p_A Modification methylase 95.1 0.054 1.8E-06 45.8 7.2 67 89-164 11-79 (327)
379 2vn8_A Reticulon-4-interacting 95.0 0.015 5.1E-07 50.3 3.6 94 86-192 181-280 (375)
380 2zb4_A Prostaglandin reductase 95.0 0.12 4E-06 44.2 9.2 100 80-193 150-261 (357)
381 1yqd_A Sinapyl alcohol dehydro 94.9 0.017 5.9E-07 49.7 3.5 101 81-193 179-283 (366)
382 1iz0_A Quinone oxidoreductase; 94.7 0.026 8.9E-07 47.1 4.2 94 83-193 121-219 (302)
383 3gqv_A Enoyl reductase; medium 94.6 0.16 5.5E-06 43.6 9.0 93 87-192 163-263 (371)
384 1zsy_A Mitochondrial 2-enoyl t 94.5 0.092 3.1E-06 44.9 7.3 98 82-192 161-270 (357)
385 4f3n_A Uncharacterized ACR, CO 94.4 0.24 8.3E-06 43.2 9.5 61 70-133 122-188 (432)
386 1pjc_A Protein (L-alanine dehy 94.2 0.023 7.9E-07 48.8 2.9 100 89-193 167-268 (361)
387 3c85_A Putative glutathione-re 94.0 0.35 1.2E-05 36.7 9.0 90 89-191 39-138 (183)
388 1lss_A TRK system potassium up 94.0 1.1 3.8E-05 31.8 12.4 89 89-190 4-100 (140)
389 2vhw_A Alanine dehydrogenase; 93.7 0.022 7.5E-07 49.3 1.7 100 88-192 167-268 (377)
390 3ius_A Uncharacterized conserv 93.7 0.78 2.7E-05 37.3 11.2 71 90-172 6-79 (286)
391 1gu7_A Enoyl-[acyl-carrier-pro 93.6 0.049 1.7E-06 46.7 3.8 97 84-193 162-276 (364)
392 4dcm_A Ribosomal RNA large sub 93.5 0.86 2.9E-05 39.2 11.5 110 77-194 26-138 (375)
393 3llv_A Exopolyphosphatase-rela 93.5 0.49 1.7E-05 34.1 8.6 65 89-163 6-77 (141)
394 2qrv_A DNA (cytosine-5)-methyl 93.4 0.21 7E-06 41.5 7.0 70 87-163 14-90 (295)
395 2eez_A Alanine dehydrogenase; 93.2 0.037 1.3E-06 47.7 2.3 100 88-192 165-266 (369)
396 4dio_A NAD(P) transhydrogenase 93.2 0.094 3.2E-06 45.5 4.7 96 88-191 189-311 (405)
397 3l9w_A Glutathione-regulated p 93.0 0.35 1.2E-05 42.2 8.3 94 88-194 3-104 (413)
398 2zig_A TTHA0409, putative modi 92.9 0.037 1.3E-06 46.1 1.8 55 139-193 21-98 (297)
399 3pi7_A NADH oxidoreductase; gr 92.7 0.094 3.2E-06 44.7 4.1 99 81-193 157-264 (349)
400 3ioy_A Short-chain dehydrogena 92.6 0.81 2.8E-05 38.3 9.8 79 88-167 7-98 (319)
401 4h0n_A DNMT2; SAH binding, tra 92.4 0.13 4.5E-06 43.5 4.6 67 90-163 4-76 (333)
402 3p2y_A Alanine dehydrogenase/p 91.9 0.034 1.2E-06 47.8 0.4 95 88-190 183-300 (381)
403 3pxx_A Carveol dehydrogenase; 91.5 1.9 6.4E-05 35.1 10.7 101 88-191 9-152 (287)
404 1l7d_A Nicotinamide nucleotide 91.4 0.068 2.3E-06 46.3 1.7 42 88-129 171-213 (384)
405 1h2b_A Alcohol dehydrogenase; 91.3 0.4 1.4E-05 40.9 6.5 95 84-193 182-286 (359)
406 4a27_A Synaptic vesicle membra 91.1 0.41 1.4E-05 40.6 6.3 98 80-193 134-239 (349)
407 4eso_A Putative oxidoreductase 90.9 1.3 4.4E-05 35.6 8.9 99 88-192 7-138 (255)
408 3ubt_Y Modification methylase 90.9 0.44 1.5E-05 40.1 6.3 66 90-163 1-68 (331)
409 1wma_A Carbonyl reductase [NAD 90.7 0.99 3.4E-05 36.4 8.2 101 88-191 3-137 (276)
410 1id1_A Putative potassium chan 90.4 1.8 6E-05 31.6 8.6 92 89-191 3-104 (153)
411 1boo_A Protein (N-4 cytosine-s 90.3 0.17 5.7E-06 42.7 3.1 55 139-193 14-85 (323)
412 3grk_A Enoyl-(acyl-carrier-pro 89.9 3.3 0.00011 34.0 10.7 103 88-193 30-170 (293)
413 2g1u_A Hypothetical protein TM 89.9 0.6 2E-05 34.4 5.6 93 87-191 17-117 (155)
414 3ggo_A Prephenate dehydrogenas 89.8 1.5 5.1E-05 36.6 8.6 87 89-189 33-125 (314)
415 3iht_A S-adenosyl-L-methionine 89.7 1.4 4.8E-05 32.4 7.1 48 71-119 24-72 (174)
416 3oig_A Enoyl-[acyl-carrier-pro 89.7 1.8 6E-05 34.9 8.8 105 88-193 6-148 (266)
417 3ijr_A Oxidoreductase, short c 88.9 3.6 0.00012 33.7 10.2 102 88-192 46-182 (291)
418 3is3_A 17BETA-hydroxysteroid d 88.8 4.1 0.00014 32.8 10.5 104 88-194 17-154 (270)
419 3k31_A Enoyl-(acyl-carrier-pro 88.8 1.6 5.6E-05 35.9 8.1 103 88-193 29-169 (296)
420 2vz8_A Fatty acid synthase; tr 88.8 0.46 1.6E-05 51.0 5.7 101 82-191 1661-1769(2512)
421 3l4b_C TRKA K+ channel protien 88.3 2.6 8.8E-05 32.8 8.6 86 91-190 2-97 (218)
422 3r3s_A Oxidoreductase; structu 88.2 3.8 0.00013 33.6 9.9 102 88-192 48-185 (294)
423 3me5_A Cytosine-specific methy 88.1 0.58 2E-05 41.7 5.0 58 89-150 88-146 (482)
424 1xg5_A ARPG836; short chain de 87.9 3.3 0.00011 33.6 9.3 78 88-166 31-121 (279)
425 1zcj_A Peroxisomal bifunctiona 87.8 4.5 0.00016 35.7 10.7 95 89-190 37-148 (463)
426 4fn4_A Short chain dehydrogena 87.7 3.1 0.00011 33.5 8.8 76 88-166 6-94 (254)
427 2f1k_A Prephenate dehydrogenas 87.6 3.3 0.00011 33.6 9.1 82 91-189 2-88 (279)
428 4fgs_A Probable dehydrogenase 87.6 3.8 0.00013 33.4 9.3 99 88-192 28-159 (273)
429 3edm_A Short chain dehydrogena 87.3 1.6 5.6E-05 35.0 7.0 102 88-192 7-143 (259)
430 3ew7_A LMO0794 protein; Q8Y8U8 87.2 3 0.0001 32.1 8.4 91 91-191 2-101 (221)
431 3v2g_A 3-oxoacyl-[acyl-carrier 87.2 5.2 0.00018 32.3 10.1 109 81-193 24-166 (271)
432 3dmg_A Probable ribosomal RNA 86.6 1.9 6.5E-05 37.1 7.4 107 75-194 33-141 (381)
433 2rir_A Dipicolinate synthase, 86.6 1.8 6.1E-05 35.8 7.0 88 88-191 156-245 (300)
434 1y1p_A ARII, aldehyde reductas 86.5 6.3 0.00022 32.6 10.6 79 87-167 9-94 (342)
435 2g5c_A Prephenate dehydrogenas 86.4 3.4 0.00012 33.5 8.6 84 91-190 3-94 (281)
436 3d4o_A Dipicolinate synthase s 86.2 2 6.9E-05 35.4 7.1 88 88-191 154-243 (293)
437 3e8x_A Putative NAD-dependent 86.1 3.2 0.00011 32.5 8.1 72 88-168 20-96 (236)
438 3qiv_A Short-chain dehydrogena 85.8 4.8 0.00017 31.9 9.1 76 88-166 8-96 (253)
439 3rkr_A Short chain oxidoreduct 85.5 4.6 0.00016 32.4 8.8 76 88-166 28-116 (262)
440 3nzo_A UDP-N-acetylglucosamine 85.4 2.4 8.1E-05 36.6 7.5 81 88-169 34-125 (399)
441 3h2s_A Putative NADH-flavin re 85.1 5.4 0.00018 30.8 8.9 92 91-191 2-103 (224)
442 3awd_A GOX2181, putative polyo 84.5 6.4 0.00022 31.2 9.3 76 88-166 12-100 (260)
443 1yb1_A 17-beta-hydroxysteroid 84.4 6.4 0.00022 31.7 9.3 77 88-167 30-119 (272)
444 3lyl_A 3-oxoacyl-(acyl-carrier 84.4 5.9 0.0002 31.2 9.0 77 88-167 4-93 (247)
445 2ew2_A 2-dehydropantoate 2-red 84.3 13 0.00044 30.4 11.3 90 90-191 4-107 (316)
446 3tjr_A Short chain dehydrogena 84.1 6.4 0.00022 32.3 9.3 77 88-167 30-119 (301)
447 1fmc_A 7 alpha-hydroxysteroid 83.7 6.2 0.00021 31.2 8.9 76 88-166 10-98 (255)
448 3gaf_A 7-alpha-hydroxysteroid 83.6 6.8 0.00023 31.3 9.0 77 88-167 11-100 (256)
449 3ucx_A Short chain dehydrogena 83.5 8.4 0.00029 30.8 9.6 76 88-166 10-98 (264)
450 1lld_A L-lactate dehydrogenase 83.2 9.8 0.00033 31.4 10.1 97 89-191 7-123 (319)
451 2km1_A Protein DRE2; yeast, an 83.0 0.77 2.6E-05 33.0 2.7 70 120-190 21-96 (136)
452 3h7a_A Short chain dehydrogena 83.0 4 0.00014 32.6 7.4 77 88-167 6-94 (252)
453 3nyw_A Putative oxidoreductase 82.9 8 0.00027 30.7 9.2 78 88-166 6-97 (250)
454 3sju_A Keto reductase; short-c 82.9 6.9 0.00024 31.7 8.9 77 88-167 23-112 (279)
455 3slk_A Polyketide synthase ext 82.9 0.15 5E-06 48.6 -1.5 96 82-192 339-442 (795)
456 3imf_A Short chain dehydrogena 82.8 5.1 0.00017 32.0 8.0 76 88-166 5-93 (257)
457 3ado_A Lambda-crystallin; L-gu 82.8 2 6.7E-05 36.0 5.5 101 88-194 5-125 (319)
458 1g0o_A Trihydroxynaphthalene r 82.7 7.4 0.00025 31.5 9.1 102 88-192 28-163 (283)
459 1iy8_A Levodione reductase; ox 82.7 8.4 0.00029 30.8 9.3 79 88-167 12-103 (267)
460 4hp8_A 2-deoxy-D-gluconate 3-d 82.2 11 0.00037 30.1 9.5 75 88-167 8-90 (247)
461 3g0o_A 3-hydroxyisobutyrate de 82.1 4.9 0.00017 33.1 7.8 84 89-189 7-99 (303)
462 3svt_A Short-chain type dehydr 82.1 8.5 0.00029 31.1 9.2 78 88-166 10-101 (281)
463 3t4x_A Oxidoreductase, short c 81.9 7.3 0.00025 31.3 8.7 79 88-167 9-96 (267)
464 3c24_A Putative oxidoreductase 81.9 9.2 0.00031 31.1 9.3 84 90-189 12-98 (286)
465 3tfo_A Putative 3-oxoacyl-(acy 81.8 8 0.00027 31.1 8.8 76 89-167 4-92 (264)
466 2dpo_A L-gulonate 3-dehydrogen 81.7 8.6 0.00029 32.1 9.1 94 90-189 7-120 (319)
467 3k96_A Glycerol-3-phosphate de 81.7 3.8 0.00013 34.9 7.0 93 89-191 29-132 (356)
468 3lf2_A Short chain oxidoreduct 81.6 9.5 0.00033 30.5 9.2 79 88-167 7-98 (265)
469 4g81_D Putative hexonate dehyd 81.6 3.8 0.00013 33.0 6.7 78 88-168 8-98 (255)
470 3d1l_A Putative NADP oxidoredu 81.5 9.8 0.00034 30.4 9.3 88 89-190 10-100 (266)
471 2jah_A Clavulanic acid dehydro 81.3 10 0.00036 29.9 9.3 76 88-166 6-94 (247)
472 3hwr_A 2-dehydropantoate 2-red 81.2 6.8 0.00023 32.5 8.4 95 88-192 18-120 (318)
473 1g60_A Adenine-specific methyl 81.1 0.45 1.6E-05 38.6 1.0 51 141-191 6-73 (260)
474 2ae2_A Protein (tropinone redu 81.1 9.9 0.00034 30.3 9.1 76 88-166 8-97 (260)
475 2rhc_B Actinorhodin polyketide 80.7 11 0.00036 30.5 9.2 76 88-166 21-109 (277)
476 2hmt_A YUAA protein; RCK, KTN, 80.5 1.5 5.3E-05 31.2 3.7 89 89-190 6-102 (144)
477 3v8b_A Putative dehydrogenase, 80.5 9.2 0.00031 31.1 8.8 76 88-166 27-115 (283)
478 3ic5_A Putative saccharopine d 80.4 7.4 0.00025 26.3 7.2 67 88-164 4-77 (118)
479 2aef_A Calcium-gated potassium 80.2 7.7 0.00026 30.4 8.1 88 88-192 8-105 (234)
480 2qq5_A DHRS1, dehydrogenase/re 80.1 8.8 0.0003 30.6 8.5 74 88-164 4-91 (260)
481 3b1f_A Putative prephenate deh 80.1 11 0.00037 30.7 9.2 85 90-189 7-98 (290)
482 1ae1_A Tropinone reductase-I; 80.0 12 0.0004 30.1 9.3 77 88-167 20-110 (273)
483 1zem_A Xylitol dehydrogenase; 80.0 11 0.00038 30.1 9.1 76 88-166 6-94 (262)
484 3i6i_A Putative leucoanthocyan 79.9 5.4 0.00018 33.4 7.4 98 89-193 10-120 (346)
485 1qsg_A Enoyl-[acyl-carrier-pro 79.6 13 0.00045 29.6 9.4 77 88-167 8-98 (265)
486 3sx2_A Putative 3-ketoacyl-(ac 79.5 11 0.00039 30.2 9.1 78 88-168 12-114 (278)
487 3cxt_A Dehydrogenase with diff 79.4 11 0.00038 30.7 9.0 77 88-167 33-122 (291)
488 4ibo_A Gluconate dehydrogenase 79.4 5.7 0.0002 32.1 7.2 77 88-167 25-114 (271)
489 1xu9_A Corticosteroid 11-beta- 79.2 10 0.00034 30.8 8.7 74 88-163 27-113 (286)
490 1eg2_A Modification methylase 79.1 0.86 2.9E-05 38.2 2.1 55 139-193 38-107 (319)
491 3iup_A Putative NADPH:quinone 79.0 1.9 6.5E-05 37.0 4.3 43 87-129 169-214 (379)
492 3o38_A Short chain dehydrogena 79.0 12 0.00043 29.7 9.1 78 88-167 21-112 (266)
493 3r1i_A Short-chain type dehydr 78.9 6.6 0.00022 31.8 7.4 78 88-168 31-121 (276)
494 3swr_A DNA (cytosine-5)-methyl 78.8 3.5 0.00012 40.1 6.4 43 88-131 539-583 (1002)
495 1ja9_A 4HNR, 1,3,6,8-tetrahydr 78.7 12 0.0004 29.9 8.9 76 88-166 20-109 (274)
496 3ftp_A 3-oxoacyl-[acyl-carrier 78.6 9.8 0.00033 30.6 8.4 76 88-166 27-115 (270)
497 2gdz_A NAD+-dependent 15-hydro 78.6 9.9 0.00034 30.4 8.4 79 88-167 6-97 (267)
498 2zat_A Dehydrogenase/reductase 78.5 13 0.00044 29.6 9.0 76 88-166 13-101 (260)
499 3ai3_A NADPH-sorbose reductase 78.5 13 0.00045 29.6 9.1 77 88-167 6-96 (263)
500 3o26_A Salutaridine reductase; 78.5 11 0.00039 30.6 8.9 78 88-167 11-102 (311)
No 1
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=100.00 E-value=4.3e-37 Score=258.77 Aligned_cols=265 Identities=28% Similarity=0.491 Sum_probs=206.9
Q ss_pred CchhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh
Q psy2408 30 KGKKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA 109 (298)
Q Consensus 30 ~~~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 109 (298)
.+.+.+++|||.. +++|+.+++..++++||........+..++.++.+.+++.+.+.++.+|||+|||+|..+..+++.
T Consensus 4 p~~~~~~~~Yd~~-~~~y~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 82 (273)
T 3bus_A 4 PTPEEVRQMYDDF-TDPFARIWGENLHFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATA 82 (273)
T ss_dssp --------------------CCGGGCCCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHH
T ss_pred CcHHHHHHHHcch-HHHHHHHcCCCceEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHh
Confidence 3466789999999 999999999999999998755557899999999999999999999999999999999999999987
Q ss_pred cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEE
Q psy2408 110 KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSIL 188 (298)
Q Consensus 110 ~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l 188 (298)
.+++|+|+|+|+.+++.+++++...++.++++++++|+.++|+++++||+|++..+++|++++ .+++++.++|+|||++
T Consensus 83 ~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 162 (273)
T 3bus_A 83 RDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTV 162 (273)
T ss_dssp SCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEE
Confidence 788999999999999999999999888888999999999998888999999999999999999 9999999999999999
Q ss_pred EEEeCCCCCCCCCh--hHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCCCcccchHHHHHHHHHHHHHHHHhh
Q psy2408 189 TLTDLPLLSVSKND--NKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITSHVMPLLVPKLTEATLTYKKEIYKS 266 (298)
Q Consensus 189 ~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (298)
++.++......... .....+........+++.+++.++++++||+++....++.++.. ++..|.+.+...+..+...
T Consensus 163 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (273)
T 3bus_A 163 AIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARP-SLVKTAEAFENARSQVEPF 241 (273)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECHHHHTT-HHHHHHHHHHHTHHHHHHH
T ss_pred EEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECcHhHHH-HHHHHHHHHHHhHHHHHhh
Confidence 99987755433301 01112222233567788999999999999999999999888887 7888888887777767666
Q ss_pred CCC--hHHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 267 IPN--PEKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 267 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
+++ .+.+.+.|...+ ..+.++|++++|+||
T Consensus 242 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp 273 (273)
T 3bus_A 242 MGAEGLDRMIATFRGLA--EVPEAGYVLIGARKP 273 (273)
T ss_dssp HCHHHHHHHHHHHHHHH--TCTTEEEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHHh--hCCCeeEEEEEEECC
Confidence 664 345555666542 366799999999998
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=5e-33 Score=235.64 Aligned_cols=262 Identities=14% Similarity=0.200 Sum_probs=217.1
Q ss_pred CCCCchhhHHhhhcCCcccccccccCCcee--EeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHH
Q psy2408 27 KGNKGKKTVATLYDSPEGQIGSVLFGGHMH--WGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGI 104 (298)
Q Consensus 27 ~~~~~~~~~~~~yd~~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~ 104 (298)
......++++.|||.. ..+|..+++..+. .++|.. +...+.+++.+..+.+++.+.+.++.+|||||||+|.++.
T Consensus 4 ~~~~~~~~i~~~Yd~~-~~~~~~~~~~~~~y~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~ 80 (287)
T 1kpg_A 4 ELKPHFANVQAHYDLS-DDFFRLFLDPTQTYSCAYFER--DDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMM 80 (287)
T ss_dssp CSCCCHHHHHHHHTSC-HHHHTTTSCTTCCCSCCCCSS--TTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHH
T ss_pred cccccHHHHHHhcCCC-HHHHHHhcCCCCCcceEEecC--CCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHH
Confidence 3456788999999998 9999988887654 578875 4668899999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccccc--ChH-HHHHHHhhc
Q psy2408 105 RLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHM--NHS-AALNEARRV 181 (298)
Q Consensus 105 ~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~-~~l~~~~r~ 181 (298)
.+++..+.+|+|+|+|+.+++.+++++...++..++.++.+|+.+++ ++||+|++..+++|+ .++ .+++++.++
T Consensus 81 ~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~ 157 (287)
T 1kpg_A 81 RAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRL 157 (287)
T ss_dssp HHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHh
Confidence 99976788999999999999999999998888778999999998765 789999999999999 556 999999999
Q ss_pred ccCCcEEEEEeCCCCCCC-------CChh---HHHHHHHh--hcccCCCCcchHHHHHHhCCCcEEEEEeCCCCcccchH
Q psy2408 182 LKSGSILTLTDLPLLSVS-------KNDN---KFKEYVKK--NIHSNFILVEHYPDLLNKSGFELIKIDDITSHVMPLLV 249 (298)
Q Consensus 182 LkpgG~l~i~~~~~~~~~-------~~~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 249 (298)
|||||++++.++...... +... ....+... .....+.+.+++.++++++||++++...++.++.. +.
T Consensus 158 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~-~~ 236 (287)
T 1kpg_A 158 LPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHYAK-TL 236 (287)
T ss_dssp SCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHHHHHH-HH
T ss_pred cCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcHhHHH-HH
Confidence 999999999887643311 0000 01111111 12235668999999999999999999999888888 88
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhc-----cccccEEEEEEEe
Q psy2408 250 PKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYM-----SKNLGYIIVTAKK 297 (298)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~k 297 (298)
..|...+...++++.+..+ +++.+.|..++..| .+.++++.++++|
T Consensus 237 ~~w~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k 287 (287)
T 1kpg_A 237 DLWSAALQANKGQAIALQS--EEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK 287 (287)
T ss_dssp HHHHHHHHHTHHHHHHHSC--HHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 9999999999999988876 56777798887766 4578999999987
No 3
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=5.6e-33 Score=237.03 Aligned_cols=263 Identities=12% Similarity=0.175 Sum_probs=220.7
Q ss_pred cCCCCchhhHHhhhcCCcccccccccCCcee--EeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHH
Q psy2408 26 NKGNKGKKTVATLYDSPEGQIGSVLFGGHMH--WGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSG 103 (298)
Q Consensus 26 ~~~~~~~~~~~~~yd~~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~ 103 (298)
.......+++++|||.. +++|+.+++..+. .++|.. ....+..++.+..+.+++.+.+.++.+|||||||+|.++
T Consensus 11 ~~~~~~~~~i~~~Yd~~-~~~y~~~l~~~~~y~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~ 87 (302)
T 3hem_A 11 TQLKPPVEAVRSHYDKS-NEFFKLWLDPSMTYSCAYFER--PDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTM 87 (302)
T ss_dssp -CCCCCHHHHHHHHTSC-HHHHHHHSCTTCCCSCCCCSS--TTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHH
T ss_pred ccccchHHHHHHhcCCC-HHHHHHhcCCCCceeeEEecC--CCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHH
Confidence 44566789999999999 9999999887664 457876 467889999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccCh---------H-H
Q psy2408 104 IRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNH---------S-A 173 (298)
Q Consensus 104 ~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~---------~-~ 173 (298)
..+++..+++|+|+|+|+.+++.+++++...+++++++++++|+.++ +++||+|++..+++|+++ . .
T Consensus 88 ~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~ 164 (302)
T 3hem_A 88 RHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDT 164 (302)
T ss_dssp HHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHH
T ss_pred HHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHH
Confidence 99999768999999999999999999999999888899999999876 589999999999999944 3 9
Q ss_pred HHHHHhhcccCCcEEEEEeCCCCCCCCChh----------HHHHHHHh--hcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 174 ALNEARRVLKSGSILTLTDLPLLSVSKNDN----------KFKEYVKK--NIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 174 ~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
+++++.++|+|||++++.++.......... .+..+... .....+.+.+++..+++++||++++...++
T Consensus 165 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 165 FFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp HHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred HHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 999999999999999998877543211000 00011111 122356788999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhc-----cccccEEEEEEEe
Q psy2408 242 SHVMPLLVPKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYM-----SKNLGYIIVTAKK 297 (298)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~k 297 (298)
.++.. +.+.|.+.+...++++.+.++ +++.+.|..++..| .+.++.+.++++|
T Consensus 245 ~~y~~-tl~~w~~~~~~~~~~~~~~~~--~~~~~~w~~yl~~~~~~f~~~~~~~~q~~~~~ 302 (302)
T 3hem_A 245 ANYVP-TLNAWADALQAHKDEAIALKG--QETCDIYMHYLRGCSDLFRDKYTDVCQFTLVK 302 (302)
T ss_dssp GGHHH-HHHHHHHHHHHTHHHHHHHHC--HHHHHHHHHHHHHHHHHHHTTSSEEEEEEEEC
T ss_pred hhHHH-HHHHHHHHHHHhHHHHHHHhC--HHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 99888 899999999999999999887 78999999998887 4467889999886
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=100.00 E-value=2.3e-33 Score=238.90 Aligned_cols=266 Identities=17% Similarity=0.250 Sum_probs=207.2
Q ss_pred CCchhhHHhhhcCC-ccccccccc-CCceeEeeccCCCCCCcHHHHHHHHHHHHHHhC----CCCCCCeEEEeCCCCCHH
Q psy2408 29 NKGKKTVATLYDSP-EGQIGSVLF-GGHMHWGYWDESNSKDNFAQGSDKLSRIMINKT----SITKGQRFIDIGCGFGLS 102 (298)
Q Consensus 29 ~~~~~~~~~~yd~~-~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~vLDiGcG~G~~ 102 (298)
....+.+++|||.. ...+|+..+ +..++++||........+..++.+..+.+++.+ .+.++.+|||+|||+|..
T Consensus 17 ~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~ 96 (297)
T 2o57_A 17 KTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGA 96 (297)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHH
T ss_pred HHHHHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHH
Confidence 34456789999986 248898776 467788999863225678889999999999998 888999999999999999
Q ss_pred HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhc
Q psy2408 103 GIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRV 181 (298)
Q Consensus 103 ~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~ 181 (298)
+..+++..+++|+|+|+|+.+++.+++++...++.++++++++|+.++|+++++||+|++..+++|++++ .+++++.++
T Consensus 97 ~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 176 (297)
T 2o57_A 97 ARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARV 176 (297)
T ss_dssp HHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHH
Confidence 9999987688999999999999999999998888888999999999999888999999999999999999 999999999
Q ss_pred ccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCCCcccchHHHHHHHHHHHHH
Q psy2408 182 LKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITSHVMPLLVPKLTEATLTYKK 261 (298)
Q Consensus 182 LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (298)
|+|||++++.++....... ......+........+.+..++.++|+++||+++....++..... .+......+.....
T Consensus 177 LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 254 (297)
T 2o57_A 177 LKPRGVMAITDPMKEDGID-KSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPDSLVH-HYSKVKAELIKRSS 254 (297)
T ss_dssp EEEEEEEEEEEEEECTTCC-GGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECHHHHHH-HHHHHHHHHHHTHH
T ss_pred cCCCeEEEEEEeccCCCCc-hHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEECchhhHH-HHHHHHHHHHHhHH
Confidence 9999999999876554333 233344444444556778999999999999999999887765444 33333333333343
Q ss_pred HHHhhCCChHHHHHHHHHHHh-----hccccccEEEEEEEeC
Q psy2408 262 EIYKSIPNPEKSIDNWLYLFK-----YMSKNLGYIIVTAKKI 298 (298)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~k~ 298 (298)
.+....+ ..+.+.|...+. ...+.++|.+++||||
T Consensus 255 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~Kp 294 (297)
T 2o57_A 255 EIASFCS--PEFQANMKRGLEHWIEGGRAGKLTWGGMLFRKS 294 (297)
T ss_dssp HHTTTSC--HHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEES
T ss_pred HHhccCC--HHHHHHHHHHHHHHHHhccCCeEEEEEEEEECC
Confidence 3333333 344444433322 2356799999999997
No 5
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=9.9e-32 Score=230.96 Aligned_cols=266 Identities=14% Similarity=0.173 Sum_probs=211.0
Q ss_pred cccCCCCchhhHHhhhcCCcccccccccCCcee--EeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCH
Q psy2408 24 KENKGNKGKKTVATLYDSPEGQIGSVLFGGHMH--WGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGL 101 (298)
Q Consensus 24 ~~~~~~~~~~~~~~~yd~~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~ 101 (298)
.........+++.++||.. .++|..+++..+. .++|.. +...+..++.+..+.+++.+.+.++.+|||+|||+|.
T Consensus 27 ~~~~~~~~~~~i~~~Yd~~-~~~~~~~~~~~~~y~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~ 103 (318)
T 2fk8_A 27 SPTKTRTRFEDIQAHYDVS-DDFFALFQDPTRTYSCAYFEP--PELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGT 103 (318)
T ss_dssp -----------CGGGGCCC-HHHHTTTSCTTCCCSCCCCSS--TTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSH
T ss_pred ccCChhhhHHHHHHhcCCC-HHHHHHHcCCCCCcceeeeCC--CCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchH
Confidence 4456667788899999998 9999988877654 467875 4668889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccC--hH-HHHHHH
Q psy2408 102 SGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMN--HS-AALNEA 178 (298)
Q Consensus 102 ~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~-~~l~~~ 178 (298)
++..+++..+++|+|+|+|+.+++.+++++...++.+++.++++|+.+++ ++||+|++..+++|++ ++ .+++++
T Consensus 104 ~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~ 180 (318)
T 2fk8_A 104 TMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRC 180 (318)
T ss_dssp HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHH
Confidence 99999986688999999999999999999998888778999999998874 7899999999999994 55 999999
Q ss_pred hhcccCCcEEEEEeCCCCCCCCC-----h-----hHHHHHHHh--hcccCCCCcchHHHHHHhCCCcEEEEEeCCCCccc
Q psy2408 179 RRVLKSGSILTLTDLPLLSVSKN-----D-----NKFKEYVKK--NIHSNFILVEHYPDLLNKSGFELIKIDDITSHVMP 246 (298)
Q Consensus 179 ~r~LkpgG~l~i~~~~~~~~~~~-----~-----~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~ 246 (298)
.++|+|||++++.++........ + .....+... .....+.+.+++.++++++||+++....++.++..
T Consensus 181 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~ 260 (318)
T 2fk8_A 181 FNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHYIK 260 (318)
T ss_dssp HHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECHHHHHH
T ss_pred HHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecchhHHH
Confidence 99999999999998875441110 0 000011111 12235668999999999999999999988888777
Q ss_pred chHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhc-----cccccEEEEEEEeC
Q psy2408 247 LLVPKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYM-----SKNLGYIIVTAKKI 298 (298)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~k~ 298 (298)
+...|...+...++++....+ +.+.+.|..++..+ .+.++++.++++||
T Consensus 261 -~~~~w~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k~ 314 (318)
T 2fk8_A 261 -TLRIWGDTLQSNKDKAIEVTS--EEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKP 314 (318)
T ss_dssp -HHHHHHHHHHHTHHHHHHHSC--HHHHHHHHHHHHHHHHHHHTTSCEEEEEEEECT
T ss_pred -HHHHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEeC
Confidence 888899999988888888776 67888898887665 44679999999997
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.97 E-value=4.8e-30 Score=214.70 Aligned_cols=222 Identities=22% Similarity=0.302 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
......+.+++.+.+.++.+|||+|||+|.++..+++..+++|+|+|+|+.+++.++++.... .+++++++|+.+++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~ 115 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKE 115 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCC
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCC
Confidence 345667888888888899999999999999999999966889999999999999999886543 57999999999998
Q ss_pred CCCCCeeEEEeccccccc--ChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHH
Q psy2408 152 FDNDSFDGGWFFESIFHM--NHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLN 228 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~--~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (298)
+++++||+|++..+++|+ +++ .+++++.++|+|||++++.++...........+..... ..+..+++.+++.++++
T Consensus 116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 194 (266)
T 3ujc_A 116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVK-QRKYTLITVEEYADILT 194 (266)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHH-HHTCCCCCHHHHHHHHH
T ss_pred CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHh-cCCCCCCCHHHHHHHHH
Confidence 888999999999999999 566 99999999999999999998765441111122222222 22445788999999999
Q ss_pred hCCCcEEEEEeCCCCcccchHHHHHHHHHHHHHHHHhhCCC--hHHHHHHHHHHHhhc-cccccEEEEEEEeC
Q psy2408 229 KSGFELIKIDDITSHVMPLLVPKLTEATLTYKKEIYKSIPN--PEKSIDNWLYLFKYM-SKNLGYIIVTAKKI 298 (298)
Q Consensus 229 ~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~a~k~ 298 (298)
++||++++...++.++.. ....|.+.+...+.++...+++ .+.....|...+..+ .+.++|.++++|||
T Consensus 195 ~~Gf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~Kp 266 (266)
T 3ujc_A 195 ACNFKNVVSKDLSDYWNQ-LLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIKDSKRKMQRWGYFKATKN 266 (266)
T ss_dssp HTTCEEEEEEECHHHHHH-HHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEECC
T ss_pred HcCCeEEEEEeCCHHHHH-HHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHHHHHHcCcccceEEEEeCC
Confidence 999999999999888877 7888989998888888887774 334455687776655 66789999999998
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.96 E-value=5.7e-28 Score=201.20 Aligned_cols=220 Identities=19% Similarity=0.263 Sum_probs=164.9
Q ss_pred HHHHHHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKT-SITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
.....++..+ .+.++.+|||+|||+|..+..+++..+.+|+|+|+|+.+++.+++++...+++++++++++|+.+++++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 4455566666 567888999999999999999999766699999999999999999999999888899999999999888
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++..+++|+ ++ .+++++.++|+|||++++.++.+..... .......... ..+.+.+.+++.++|+++||
T Consensus 112 ~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSER-PAEIEDFWMD-AYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp TTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCC-CHHHHHHHHH-HCTTCCBHHHHHHHHHHTTE
T ss_pred CCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCC-hHHHHHHHHH-hCCCCCCHHHHHHHHHHCCC
Confidence 8999999999999999 56 9999999999999999999876554433 2222222222 23457789999999999999
Q ss_pred cEEEEEeCCCCcc-cchHHHHHHHHHHHHHHHHhhCCC---hHHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 233 ELIKIDDITSHVM-PLLVPKLTEATLTYKKEIYKSIPN---PEKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
+++....++...+ ..+...+.......... .+..+. .....+.|...+..+.+.++|+++++||+
T Consensus 189 ~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 189 TPTAHFILPENCWTEHYFAPQDEVRETFMKE-HAGNKTAMDFMKGQQYERSLYSKYKDYYGYVFYIGQKR 257 (257)
T ss_dssp EEEEEEECCGGGTCCCCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred eEEEEEECChhhHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCccceEEEEEecC
Confidence 9999988887765 21222222222222111 111000 12233455556666688899999999995
No 8
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.96 E-value=6.1e-28 Score=200.89 Aligned_cols=218 Identities=15% Similarity=0.192 Sum_probs=159.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
......++..+.+.++.+|||+|||+|..+..+++..+.+|+|+|+|+.+++.+++++...++.++++++++|+.++++
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA- 100 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-
Confidence 4556777888888899999999999999999999877889999999999999999999988887789999999999877
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++..+++|++++ .+++++.++|||||++++.++.+..... ...............+++..++.++|+++||
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 179 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPA-TEEIAQACGVSSTSDFLTLPGLVGAFDDLGY 179 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCS-SHHHHHTTTCSCGGGSCCHHHHHHHHHTTTB
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCC-hHHHHHHHhcccccccCCHHHHHHHHHHCCC
Confidence 7899999999999999988 9999999999999999998876544332 1222221222223467788999999999999
Q ss_pred cEEEEEeCCCCcccchHHH-HHHHHHHHHHHHHhhCCC---hHHHH---HHHHH-HHhhccccccEEEEEEEeC
Q psy2408 233 ELIKIDDITSHVMPLLVPK-LTEATLTYKKEIYKSIPN---PEKSI---DNWLY-LFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~-~~~~~~~~~~~~~~~a~k~ 298 (298)
.++.....+...+..+... |. .+.. .....+. ....+ ..|.. +.....+.++|++++++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~k~ 248 (256)
T 1nkv_A 180 DVVEMVLADQEGWDRYEAAKWL-TMRR----WLEANPDDDFAAEVRAELNIAPKRYVTYARECFGWGVFALIAR 248 (256)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH-HHHH----HHTTCTTSTTHHHHHHHHHHHHHHHHHTHHHHEEEEEEEECBC
T ss_pred eeEEEEeCCHHHHHHHHHHHHh-HHHH----HHHHCCCCccHHHHHHHHHHHHHHHHhcccccccchhhhhhHH
Confidence 9988766554433211111 21 1111 1111111 12222 23332 2233467799999999985
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.96 E-value=8.7e-27 Score=195.21 Aligned_cols=217 Identities=19% Similarity=0.260 Sum_probs=160.3
Q ss_pred HHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
.....++..+. +.++.+|||||||+|.++..+++..+++|+|+|+|+.+++.+++++...+++++++++++|+.+++++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR 111 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence 34555666665 67889999999999999999999756699999999999999999999999888899999999999888
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++..+++|+ ++ .+++++.++|+|||++++.++.+..... .......... ..+.+.+.+++.++++++||
T Consensus 112 ~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDER-PAEINDFWMD-AYPEIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp TTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCC-CHHHHHHHHH-HCTTCEEHHHHHHHHHHTTE
T ss_pred CCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCC-hHHHHHHHHH-hCCCCCCHHHHHHHHHHCCC
Confidence 8999999999999999 66 9999999999999999999887544433 2222222211 23467788999999999999
Q ss_pred cEEEEEeCCCCcc-cchHHHHHHHHHHHHHHHHhhCCC---h---HHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 233 ELIKIDDITSHVM-PLLVPKLTEATLTYKKEIYKSIPN---P---EKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
++++...++...+ ..++..+.... ..+....+. . -...+.+...+..+.+.++|.+++++|.
T Consensus 189 ~~v~~~~~~~~~w~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~f~~~~~~ 257 (267)
T 3kkz_A 189 LPVATFILPENCWTDHYFTPKVAAQ----KIFLTKYAGNKIAEEFSMLQSIEEELYHKYKEYYGYTFFIAKKI 257 (267)
T ss_dssp EEEEEEECCGGGTTTTTHHHHHHHH----HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred EEEEEEECCHhHHHHHHHHHHHHHH----HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhccccCeEeehhhHH
Confidence 9999998886544 21322222222 222222111 0 1111122233333456679999999984
No 10
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.95 E-value=5e-27 Score=201.00 Aligned_cols=210 Identities=18% Similarity=0.273 Sum_probs=163.4
Q ss_pred HHHHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 73 SDKLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 73 ~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
.....+.+++.+. +.++.+|||+|||+|.++..+++..+++|+|+|+|+.+++.|++++...++.+++.++++|+.+++
T Consensus 101 ~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 101 ESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 3444566788887 788999999999999999999996688999999999999999999999998888999999999998
Q ss_pred CCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKS 230 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (298)
+++++||+|++..+++|+. + .+++++.++|+|||++++.++.......................+++.+++.++|+++
T Consensus 181 ~~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a 259 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVD-LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADN 259 (312)
T ss_dssp CCTTCEEEEEEESCGGGSC-HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTT
T ss_pred CCCCCEeEEEECCchhhCC-HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHC
Confidence 8889999999999999995 7 9999999999999999998876554321112222222333345678899999999999
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 231 GFELIKIDDITSHVMPLLVPKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 231 Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
||+++....++.. +...|...+.... ..+..+. |...+. .+.++|++|+|+|+
T Consensus 260 Gf~~~~~~~~~~~----~~~~w~~~~~~~~-----~~g~~~~----~~~~~~--~~~~~y~~i~a~k~ 312 (312)
T 3vc1_A 260 RLVPHTIVDLTPD----TLPYWELRATSSL-----VTGIEKA----FIESYR--DGSFQYVLIAADRV 312 (312)
T ss_dssp TEEEEEEEECHHH----HHHHHHHHTTSTT-----CCSCHHH----HHHHHH--HTSEEEEEEEEEEC
T ss_pred CCEEEEEEeCCHH----HHHHHHHHHHHhh-----hhcChHH----HHHHHH--hcCCcEEEEEEeeC
Confidence 9999999987743 4556655544221 1111223 332222 57899999999995
No 11
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.93 E-value=1.2e-24 Score=183.87 Aligned_cols=164 Identities=18% Similarity=0.214 Sum_probs=130.0
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDND 155 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~ 155 (298)
...++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++..++.++++|+.+++ ++++
T Consensus 58 l~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 58 LDRVLAEMGP-QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHHHHTCS-SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred HHHHHHhcCC-CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 4456666654 3679999999999999999995 88999999999999999999998888778999999999886 6779
Q ss_pred CeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh---hHHHHHHH--------hhcccCCCCcchH
Q psy2408 156 SFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKND---NKFKEYVK--------KNIHSNFILVEHY 223 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~ 223 (298)
+||+|++..+++|++++ .+++++.++|+|||++++..++........ ..+..... ......+++.+++
T Consensus 136 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 136 PVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred CceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 99999999999999999 999999999999999999877632210000 00011111 1112356788999
Q ss_pred HHHHHhCCCcEEEEEeCCC
Q psy2408 224 PDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~~ 242 (298)
..+|+++||++++...+..
T Consensus 216 ~~~l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVRV 234 (285)
T ss_dssp HHHHHHTTCEEEEEEEESS
T ss_pred HHHHHHCCCceeeeeeEEE
Confidence 9999999999999887653
No 12
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.92 E-value=1.3e-24 Score=181.29 Aligned_cols=163 Identities=21% Similarity=0.285 Sum_probs=131.3
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDS 156 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 156 (298)
...+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++ ++.++++|+.++|+++++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~ 103 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDER 103 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCC
Confidence 556677777788999999999999999999985 469999999999999999999888765 699999999999988899
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHH---HhhcccCCCCcchHHHHHHhCCC
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYV---KKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
||+|++..+++|++++ .+++++.++|+|||++++.+........ ...+.... ....+..+++.+++.++|+++||
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 182 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDA-FDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGF 182 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHH-HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTC
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHH-HHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCC
Confidence 9999999999999999 9999999999999999998765433211 01111111 11223456788999999999999
Q ss_pred cEEEEEeCCC
Q psy2408 233 ELIKIDDITS 242 (298)
Q Consensus 233 ~~~~~~~~~~ 242 (298)
.++.......
T Consensus 183 ~~~~~~~~~~ 192 (260)
T 1vl5_A 183 ELEELHCFHK 192 (260)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEeec
Confidence 9888776543
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.92 E-value=3.1e-24 Score=178.36 Aligned_cols=159 Identities=18% Similarity=0.220 Sum_probs=123.7
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK---GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
...+++.. ++++.+|||+|||+|..+..+++.. +++|+|+|+|+.|++.|++++...+...+++++++|+.++|+
T Consensus 60 i~~l~~~~-~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~- 137 (261)
T 4gek_A 60 IGMLAERF-VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI- 137 (261)
T ss_dssp HHHHHHHH-CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-
T ss_pred HHHHHHHh-CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-
Confidence 33344433 4789999999999999999999863 679999999999999999999988888889999999999876
Q ss_pred CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh-------------------
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK------------------- 211 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~------------------- 211 (298)
++||+|++..+++|++++ .+|++++++|||||+|++.+...................
T Consensus 138 -~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l 216 (261)
T 4gek_A 138 -ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSML 216 (261)
T ss_dssp -CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHH
T ss_pred -cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhh
Confidence 469999999999999876 789999999999999999987654422101111111000
Q ss_pred hcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 212 NIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
.......+.+++.++|+++||..+++.
T Consensus 217 ~~~~~~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 217 ENVMLTDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHCCCBCHHHHHHHHHHHTCSEEEEE
T ss_pred cccccCCCHHHHHHHHHHcCCCeEEEE
Confidence 011234678889999999999988753
No 14
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.92 E-value=6.8e-24 Score=178.29 Aligned_cols=227 Identities=12% Similarity=0.090 Sum_probs=164.2
Q ss_pred CcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC--CeEEEEeCCHH------HHHHHHHHHHhcCCCC
Q psy2408 67 DNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG--CRVDGITISKF------QQESAMKTAKAEGLLD 138 (298)
Q Consensus 67 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~------~l~~a~~~~~~~~~~~ 138 (298)
..+..++.+....+++.+.+.++.+|||||||+|.++..+++..+ .+|+|+|+|+. +++.+++++...++.+
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 356677888889999999889999999999999999999998754 79999999997 9999999999888767
Q ss_pred ceEEEECC---CCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh--hHHHHHHH--
Q psy2408 139 KVNFLHGD---ALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKND--NKFKEYVK-- 210 (298)
Q Consensus 139 ~i~~~~~d---~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~-- 210 (298)
+++++++| ...+++++++||+|++..+++|++++ .+++.+.++++|||++++.++......... .....+..
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGL 181 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHH
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHH
Confidence 89999998 44456677899999999999999999 877777778888999999988765432200 00111111
Q ss_pred --------hhcccCCCCcchHHHHHHhCCCcEEEEEeCCCCcccchHHHHHHHHHHHHHHHHhh-CCChHHHHHHHHHHH
Q psy2408 211 --------KNIHSNFILVEHYPDLLNKSGFELIKIDDITSHVMPLLVPKLTEATLTYKKEIYKS-IPNPEKSIDNWLYLF 281 (298)
Q Consensus 211 --------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 281 (298)
......+++.+++.++++++||+++....+...... ...|...+.......... .+..+.+++.|..+.
T Consensus 182 ~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~~~~--~~~W~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 259 (275)
T 3bkx_A 182 LYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVEDPTLD--DAHWEIATTNALLTELKLSTDLRDRVKPLLEAMS 259 (275)
T ss_dssp HHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCTTCT--HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred HhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEecCCCCC--CchhhHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 011224678999999999999999988877333222 235655443322221111 111467888899865
Q ss_pred hhccccccEEEEEE
Q psy2408 282 KYMSKNLGYIIVTA 295 (298)
Q Consensus 282 ~~~~~~~~~~~~~a 295 (298)
..+...++.+++++
T Consensus 260 ~~g~~~~~~~~~~~ 273 (275)
T 3bkx_A 260 HNGTASLATFTGRI 273 (275)
T ss_dssp TSCCCCCCEEEEEE
T ss_pred hccccccceeeEEE
Confidence 54444565555543
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.92 E-value=4.4e-24 Score=176.58 Aligned_cols=195 Identities=13% Similarity=0.086 Sum_probs=140.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.|++++.. +++++++|+.++ +++++||+|++.+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHVL 113 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESCG
T ss_pred cCCCcEEEECCCCCHHHHHHHH-hCCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhHH
Confidence 4677999999999999999998 466999999999999999988542 689999999887 467899999999999
Q ss_pred cccChH-HHHHHHh-hcccCCcEEEEEeCCCCCCCC----------ChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 167 FHMNHS-AALNEAR-RVLKSGSILTLTDLPLLSVSK----------NDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 167 ~~~~~~-~~l~~~~-r~LkpgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
+|++++ .+++++. ++|+|||++++.+++...... ....+........+..+++.+++.++|+++||++
T Consensus 114 ~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 114 EHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp GGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 999999 9999999 999999999998876432100 0000000011223446789999999999999999
Q ss_pred EEEEeCCCCcccchHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 235 IKIDDITSHVMPLLVPKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
+....+...... ..|.... .. ...+ ...+...|..+........+.+.++++|+
T Consensus 194 ~~~~~~~~~p~~---~~~~~~~---~~--~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~k~ 247 (250)
T 2p7i_A 194 TYRSGIFFKALA---NFQWDQI---LQ--TDIL--SKEYLDGCYQLGQQYPDLCASIFLLCEKG 247 (250)
T ss_dssp EEEEEEEECCSC---HHHHHHH---HH--TTSS--CHHHHHHHHHHHTTCGGGEEEEEEEEECC
T ss_pred EEEeeeEecCCc---hHHHHHh---hh--cchh--hHHHHHHHHHhccccchhhHHHHHHhccc
Confidence 998765443222 2222110 00 0012 24555556655444455678888899885
No 16
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.92 E-value=1e-24 Score=182.03 Aligned_cols=165 Identities=18% Similarity=0.223 Sum_probs=124.4
Q ss_pred HHHHHHHHH-hCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 74 DKLSRIMIN-KTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 74 ~~~~~~l~~-~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
..+.+.+.. ...+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++ . +...++.++++|+.++++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~ 100 (263)
T 2yqz_A 24 GQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPL 100 (263)
T ss_dssp HHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCS
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCC
Confidence 444445544 335577889999999999999999984 789999999999999999987 2 233579999999999988
Q ss_pred CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCC----hhHHHHHHHhhc-----ccCCCCcch
Q psy2408 153 DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKN----DNKFKEYVKKNI-----HSNFILVEH 222 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~ 222 (298)
++++||+|++..+++|++++ .+++++.++|+|||++++. +.... ... ...+........ ...+++.++
T Consensus 101 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (263)
T 2yqz_A 101 PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKE 178 (263)
T ss_dssp CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHH
Confidence 88999999999999999999 9999999999999999987 22111 110 011122222211 123566788
Q ss_pred HHHHHHhCCCcEEEEEeCCCC
Q psy2408 223 YPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 223 ~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
+.++|+++||.++........
T Consensus 179 ~~~~l~~~Gf~~~~~~~~~~~ 199 (263)
T 2yqz_A 179 VEEALRRLGLKPRTREVARWR 199 (263)
T ss_dssp HHHHHHHTTCCCEEEEEEEEE
T ss_pred HHHHHHHcCCCcceEEEeeee
Confidence 999999999998776544433
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.92 E-value=1.8e-24 Score=175.44 Aligned_cols=169 Identities=24% Similarity=0.284 Sum_probs=136.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
...+.+.+++.+...++ +|||+|||+|.++..+++..+.+++|+|+|+.+++.+++++...++.+++.++++|+.++++
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 34566777788777766 99999999999999999975779999999999999999999998887789999999999988
Q ss_pred CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh---------hcccCCCCcch
Q psy2408 153 DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK---------NIHSNFILVEH 222 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 222 (298)
++++||+|++..+++|++++ .+++++.++|+|||++++.+........ ......... .....+++.++
T Consensus 108 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELR--DSISAEMIRKNPDWKEFNRKNISQENVER 185 (219)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHH--HHHHHHHHHHCTTHHHHHHHHSSHHHHHH
T ss_pred CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHH--HHHHHHHHHhHHHHHhhhhhccccCCHHH
Confidence 88999999999999999999 9999999999999999998755433111 111110000 01234557799
Q ss_pred HHHHHHhCCCcEEEEEeCCCCc
Q psy2408 223 YPDLLNKSGFELIKIDDITSHV 244 (298)
Q Consensus 223 ~~~~l~~~Gf~~~~~~~~~~~~ 244 (298)
+.++|+++||++++........
T Consensus 186 ~~~~l~~aGf~~v~~~~~~~~~ 207 (219)
T 3dlc_A 186 FQNVLDEIGISSYEIILGDEGF 207 (219)
T ss_dssp HHHHHHHHTCSSEEEEEETTEE
T ss_pred HHHHHHHcCCCeEEEEecCCce
Confidence 9999999999998877554443
No 18
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=5.6e-24 Score=177.48 Aligned_cols=156 Identities=22% Similarity=0.292 Sum_probs=125.8
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
.+.+.+++.+.+.++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.++... +++++++|+.++++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 4567777777778899999999999999999998 7889999999999998876542 6999999999999888
Q ss_pred CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh--hHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 155 DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKND--NKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
++||+|++..+++|++++ .+++++.++|| ||++++.++......... ..+... ....+..+.+.+++. +|+++|
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~aG 169 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFL-WEDALRFLPLDEQIN-LLQENT 169 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHH-HHHHHTSCCHHHHHH-HHHHHH
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHH-hhhhhhhCCCHHHHH-HHHHcC
Confidence 999999999999999999 99999999999 999998887644322100 111111 122235566778888 999999
Q ss_pred CcEEEEEeCC
Q psy2408 232 FELIKIDDIT 241 (298)
Q Consensus 232 f~~~~~~~~~ 241 (298)
|.++....+.
T Consensus 170 F~~v~~~~~~ 179 (261)
T 3ege_A 170 KRRVEAIPFL 179 (261)
T ss_dssp CSEEEEEECC
T ss_pred CCceeEEEec
Confidence 9999887763
No 19
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=3.2e-23 Score=174.57 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=122.3
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCee
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFD 158 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 158 (298)
.+++.+.+.++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.++++. .++.++++|+..+++ +++||
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD 119 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-DKPLD 119 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-SSCEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-CCCcC
Confidence 455666667889999999999999999998 7889999999999999998774 368899999999886 57999
Q ss_pred EEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhh--------cccCCCCcchHHHHHHh
Q psy2408 159 GGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKN--------IHSNFILVEHYPDLLNK 229 (298)
Q Consensus 159 ~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~ 229 (298)
+|++..+++|++++ .+++++.++|+|||++++..+...........+....... ....+.+.+++.++|++
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEK 199 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHH
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHH
Confidence 99999999999999 9999999999999999998765432101001111111111 11245688999999999
Q ss_pred CCCcEEEEEeCCC
Q psy2408 230 SGFELIKIDDITS 242 (298)
Q Consensus 230 ~Gf~~~~~~~~~~ 242 (298)
+||+++.......
T Consensus 200 aGf~~~~~~~~~~ 212 (279)
T 3ccf_A 200 QGFDVTYAALFNR 212 (279)
T ss_dssp HTEEEEEEEEEEC
T ss_pred cCCEEEEEEEecc
Confidence 9999988765543
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.91 E-value=2.1e-23 Score=171.75 Aligned_cols=165 Identities=22% Similarity=0.279 Sum_probs=135.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
......+++.+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...+++ ++.++++|+..++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCC
Confidence 445667778888899999999999999999999984 569999999999999999999887764 699999999999888
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHH---HhhcccCCCCcchHHHHHHh
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYV---KKNIHSNFILVEHYPDLLNK 229 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~ 229 (298)
+++||+|++..+++|++++ .+++++.++|+|||++++.+........ ...+.... ....+...++.+++.++|++
T Consensus 85 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 163 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPV-LDEFVNHLNRLRDPSHVRESSLSEWQAMFSA 163 (239)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHH-HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChh-HHHHHHHHHHhccccccCCCCHHHHHHHHHH
Confidence 8999999999999999999 9999999999999999998776433211 11111111 11233466788999999999
Q ss_pred CCCcEEEEEeCC
Q psy2408 230 SGFELIKIDDIT 241 (298)
Q Consensus 230 ~Gf~~~~~~~~~ 241 (298)
+||.++......
T Consensus 164 aGf~~~~~~~~~ 175 (239)
T 1xxl_A 164 NQLAYQDIQKWN 175 (239)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCcEEEEEeec
Confidence 999988877654
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.91 E-value=4.3e-24 Score=173.55 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=121.6
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeE
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDG 159 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 159 (298)
+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++. .+++++++|+.+++++ ++||+
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~ 109 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDT 109 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSE
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEE
Confidence 344444457889999999999999999985 7899999999999999998864 4689999999999877 89999
Q ss_pred EEecccccccChH-H--HHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHH--------HHhhcccCCCCcchHHHHHH
Q psy2408 160 GWFFESIFHMNHS-A--ALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEY--------VKKNIHSNFILVEHYPDLLN 228 (298)
Q Consensus 160 V~~~~~l~~~~~~-~--~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~ 228 (298)
|++..+++|++++ . +++++.++|+|||.+++.++............... ........+++.+++.++|+
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred EEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 9999999999998 5 99999999999999999986643321100001111 11112234568899999999
Q ss_pred hCCCcEEEEEeCCC
Q psy2408 229 KSGFELIKIDDITS 242 (298)
Q Consensus 229 ~~Gf~~~~~~~~~~ 242 (298)
++||+++.......
T Consensus 190 ~aGf~v~~~~~~~~ 203 (220)
T 3hnr_A 190 NNGFHVTFTRLNHF 203 (220)
T ss_dssp HTTEEEEEEECSSS
T ss_pred HCCCEEEEeeccce
Confidence 99999887765433
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.91 E-value=2.9e-24 Score=176.31 Aligned_cols=163 Identities=18% Similarity=0.189 Sum_probs=126.0
Q ss_pred HHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 75 KLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 75 ~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
...+.++..+. ..++.+|||+|||+|..+..+++.. +.+++|+|+|+.+++.+++++...+ ++.++++|+.++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF 106 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC
Confidence 33455566654 4577899999999999999999974 7899999999999999999876543 79999999999887
Q ss_pred CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHH------------------Hh
Q psy2408 153 DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYV------------------KK 211 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~------------------~~ 211 (298)
+ ++||+|++..+++|++++ .+++++.++|+|||++++.+................. ..
T Consensus 107 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (234)
T 3dtn_A 107 E-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYER 185 (234)
T ss_dssp C-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC--
T ss_pred C-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 6 899999999999999887 5999999999999999999876543211000000000 11
Q ss_pred hcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 212 NIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
......++.+++.++|+++||++++.....
T Consensus 186 ~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 186 SKLDKDIEMNQQLNWLKEAGFRDVSCIYKY 215 (234)
T ss_dssp --CCCCCBHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccccCHHHHHHHHHHcCCCceeeeeee
Confidence 123456788999999999999999865443
No 23
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.91 E-value=5.4e-24 Score=175.48 Aligned_cols=190 Identities=21% Similarity=0.386 Sum_probs=130.1
Q ss_pred hhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC
Q psy2408 32 KKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG 111 (298)
Q Consensus 32 ~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~ 111 (298)
.+.+.++||.. +..|+..... .|... ....+...+...+ +++.+|||+|||+|.++..+++. +
T Consensus 13 ~~~~~~~~~~~-a~~~~~~~~~-----~~~~~--------~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~ 75 (242)
T 3l8d_A 13 HESAEKKWDSS-AEFWNQNSQE-----MWDSG--------SRSTIIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT-G 75 (242)
T ss_dssp --------------------CH-----HHHTS--------TTTTHHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHT-T
T ss_pred HHHHHHHHHhH-HHHhhhhhhh-----ccCcc--------cHHHHHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc-C
Confidence 34567888887 7777654221 22221 0122344444444 47789999999999999999995 8
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 112 CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 112 ~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
.+|+|+|+|+.+++.++++. ...+++++++|+.++++++++||+|++..+++|++++ .+++++.++|+|||++++
T Consensus 76 ~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 76 YKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp CEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEE
Confidence 89999999999999998774 2256999999999998888999999999999999999 999999999999999999
Q ss_pred EeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 191 TDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
.++....... ...+........+...++.+++..+++++||++++...+...
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 203 (242)
T 3l8d_A 152 AILGPTAKPR-ENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKR 203 (242)
T ss_dssp EEECTTCGGG-GGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred EEcCCcchhh-hhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccccc
Confidence 9866443222 112222222233455688899999999999999988765433
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.91 E-value=4.7e-23 Score=167.29 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=133.3
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
..+++.+.+.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++ ++.++++|+.+++++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCC
Confidence 456666777889999999999999999999864 479999999999999999999888875 79999999999888889
Q ss_pred CeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 156 SFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
+||+|++..+++|++++ .+++++.++|+|||++++.++....... .......++.+++..+++++||++
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK----------GPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------SCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc----------CCchhcccCHHHHHHHHHHCCCEE
Confidence 99999999999999999 9999999999999999999876544322 111334678899999999999999
Q ss_pred EEEEeCCCC
Q psy2408 235 IKIDDITSH 243 (298)
Q Consensus 235 ~~~~~~~~~ 243 (298)
++...++..
T Consensus 176 ~~~~~~~~~ 184 (219)
T 3dh0_A 176 GRVVEVGKY 184 (219)
T ss_dssp EEEEEETTT
T ss_pred EEEEeeCCc
Confidence 998877655
No 25
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.2e-22 Score=169.02 Aligned_cols=155 Identities=17% Similarity=0.114 Sum_probs=122.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
+....+++.+.+.++.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++. .++.++++|+.+++ +
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~-~ 92 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWK-P 92 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCC-C
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcC-c
Confidence 345567888888888999999999999999999864 789999999999999998872 46899999999988 6
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh-----------hcccCCCCcc
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK-----------NIHSNFILVE 221 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 221 (298)
+++||+|++..+++|++++ .+++++.++|+|||++++..+....... .......... .....+.+.+
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPT-HIAMHETADGGPWKDAFSGGGLRRKPLPPPS 171 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHH-HHHHHHHHHHSTTGGGC-------CCCCCHH
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHH-HHHHHHHhcCcchHHHhccccccccCCCCHH
Confidence 7899999999999999999 9999999999999999998865322110 1111111111 1133567889
Q ss_pred hHHHHHHhCCCcEEEE
Q psy2408 222 HYPDLLNKSGFELIKI 237 (298)
Q Consensus 222 ~~~~~l~~~Gf~~~~~ 237 (298)
++.++|+++||.+...
T Consensus 172 ~~~~~l~~aGf~v~~~ 187 (259)
T 2p35_A 172 DYFNALSPKSSRVDVW 187 (259)
T ss_dssp HHHHHHGGGEEEEEEE
T ss_pred HHHHHHHhcCCceEEE
Confidence 9999999999975443
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.90 E-value=1.2e-23 Score=168.76 Aligned_cols=179 Identities=21% Similarity=0.221 Sum_probs=138.2
Q ss_pred hhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC
Q psy2408 33 KTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC 112 (298)
Q Consensus 33 ~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 112 (298)
+.++++|+.. +..|+..+...... .. ....+...++.. .+.+|||+|||+|.++..+++. +.
T Consensus 3 ~~~~~~y~~~-a~~y~~~~~~~~~~--------~~----~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~-~~ 64 (203)
T 3h2b_A 3 DDVSKAYSSP-TFDAEALLGTVISA--------ED----PDRVLIEPWATG----VDGVILDVGSGTGRWTGHLASL-GH 64 (203)
T ss_dssp CHHHHHHHCT-TTCHHHHTCSSCCT--------TC----TTHHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHT-TC
T ss_pred HHHHHHHhhH-HHHHHHHhhhhccc--------cH----HHHHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhc-CC
Confidence 4678999999 88887765332110 01 112233333333 2779999999999999999985 78
Q ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccC--hH-HHHHHHhhcccCCcEEE
Q psy2408 113 RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMN--HS-AALNEARRVLKSGSILT 189 (298)
Q Consensus 113 ~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~-~~l~~~~r~LkpgG~l~ 189 (298)
+++|+|+|+.+++.++++. .++.++++|+.++++++++||+|++..+++|++ +. .+++++.++|+|||+++
T Consensus 65 ~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLL 138 (203)
T ss_dssp CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 9999999999999999873 368999999999888889999999999999997 66 99999999999999999
Q ss_pred EEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 190 LTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 190 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
+..+....... +........+++.+++.++|+++||+++.....+.
T Consensus 139 i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 139 MSFFSGPSLEP-------MYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp EEEECCSSCEE-------ECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred EEEccCCchhh-------hhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 98876543111 00111233467899999999999999999887765
No 27
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.90 E-value=7.8e-22 Score=165.79 Aligned_cols=173 Identities=24% Similarity=0.440 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 70 AQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
......+...+.....+.++.+|||||||+|.++..+++.. +.+|+++|+|+.+++.+++++...+++ ++.++..|+.
T Consensus 19 ~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~ 97 (276)
T 3mgg_A 19 SEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIF 97 (276)
T ss_dssp ----CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGG
T ss_pred HHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccc
Confidence 33445566666666777889999999999999999999874 679999999999999999999988874 6999999999
Q ss_pred CCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCC---CCChhHHH---HHH--HhhcccCCCC
Q psy2408 149 NLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSV---SKNDNKFK---EYV--KKNIHSNFIL 219 (298)
Q Consensus 149 ~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~---~~~~~~~~---~~~--~~~~~~~~~~ 219 (298)
.+++++++||+|++..+++|++++ .+++++.++|+|||++++.+...... ........ .+. .........+
T Consensus 98 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (276)
T 3mgg_A 98 SLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLV 177 (276)
T ss_dssp GCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTG
T ss_pred cCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcch
Confidence 998888999999999999999999 99999999999999999987653221 11011111 111 1122345667
Q ss_pred cchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 220 VEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 220 ~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
..++..+|+++||++++.......
T Consensus 178 ~~~l~~~l~~aGf~~v~~~~~~~~ 201 (276)
T 3mgg_A 178 GRQIYPLLQESGFEKIRVEPRMVY 201 (276)
T ss_dssp GGGHHHHHHHTTCEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEeeEEEE
Confidence 789999999999999988865433
No 28
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.90 E-value=4.7e-23 Score=169.73 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=134.5
Q ss_pred HHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CC
Q psy2408 76 LSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PF 152 (298)
Q Consensus 76 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~ 152 (298)
+...+...+. +.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|+.++ ++
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~ 97 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL 97 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc
Confidence 3333433332 356789999999999999999884 88999999999999998754 67899998775 77
Q ss_pred CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHh
Q psy2408 153 DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNK 229 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (298)
++++||+|++..+++|++++ .+++++.++|+|||++++..+.... ............+..+++.+++..++++
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 173 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS----LYSLINFYIDPTHKKPVHPETLKFILEY 173 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS----HHHHHHHTTSTTCCSCCCHHHHHHHHHH
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch----hHHHHHHhcCccccccCCHHHHHHHHHH
Confidence 78999999999999999954 9999999999999999998876332 1222222222345567888999999999
Q ss_pred CCCcEEEEEeCC----------CCcccchHHHHHHH-HHHHHHHHHhh-CC
Q psy2408 230 SGFELIKIDDIT----------SHVMPLLVPKLTEA-TLTYKKEIYKS-IP 268 (298)
Q Consensus 230 ~Gf~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~-~~ 268 (298)
+||+++....+. .+ .. ....|.+. +...++.+... ++
T Consensus 174 aGf~~~~~~~~~~~~~~~~l~~~~-~~-~l~~w~~~~~~~~~~~~~~~~f~ 222 (240)
T 3dli_A 174 LGFRDVKIEFFEECEELTKLAKID-SN-TVSEEVIRVINENIEKLNRILFG 222 (240)
T ss_dssp HTCEEEEEEEECCCCTTTSCCCCC-CS-SSCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCeEEEEEEeccCcccccccccc-cc-cccHHHHHhhhhhHHHHHhhccC
Confidence 999999888766 33 22 45567666 66666665554 54
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.89 E-value=1.2e-22 Score=168.68 Aligned_cols=187 Identities=16% Similarity=0.089 Sum_probs=143.2
Q ss_pred hhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC
Q psy2408 32 KKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG 111 (298)
Q Consensus 32 ~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~ 111 (298)
.....++|+.. ...|+...+.. ..+..........++..+...++.+|||+|||+|.++..+++...
T Consensus 50 ~~~~~~~w~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~ 116 (254)
T 1xtp_A 50 YGKALEYWRTV-PATVSGVLGGM------------DHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLY 116 (254)
T ss_dssp HHHHHHHHHTS-CSSHHHHTTTC------------GGGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHC
T ss_pred hhhhhhHHhcC-CccccceecCc------------CccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhc
Confidence 44567777776 66665554321 122344555667788888777889999999999999999988655
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccCh--H-HHHHHHhhcccCCcEE
Q psy2408 112 CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNH--S-AALNEARRVLKSGSIL 188 (298)
Q Consensus 112 ~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~--~-~~l~~~~r~LkpgG~l 188 (298)
.+|+++|+|+.+++.+++++... .++.++++|+..+++++++||+|++..+++|+++ . .+++++.++|+|||++
T Consensus 117 ~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 193 (254)
T 1xtp_A 117 ATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYI 193 (254)
T ss_dssp SEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEE
Confidence 68999999999999999987643 4699999999998888889999999999999965 5 9999999999999999
Q ss_pred EEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 189 TLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 189 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
++.+........ ..........++.+++.++|+++||+++......
T Consensus 194 ~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 194 FFKENCSTGDRF-------LVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEEBC--CCE-------EEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred EEEecCCCcccc-------eecccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 998864322111 0001112335678999999999999999887653
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.89 E-value=3.5e-23 Score=170.62 Aligned_cols=193 Identities=17% Similarity=0.120 Sum_probs=138.5
Q ss_pred chhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHh
Q psy2408 31 GKKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKA 109 (298)
Q Consensus 31 ~~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~ 109 (298)
..+...+|||.. ...|+..++... .+.. .-......+.+.++..+. ..++.+|||+|||+|.++..+++.
T Consensus 30 ~~~~~~~~w~~~-~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 100 (241)
T 2ex4_A 30 FYSKAKTYWKQI-PPTVDGMLGGYG---HISS-----IDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLP 100 (241)
T ss_dssp HHHHHHHHHHTS-CSSHHHHTTTCG---GGHH-----HHHHHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTT
T ss_pred hHHHHHHHHhcC-CccccccccCCC---Ccch-----hhHHhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHh
Confidence 345677888888 666666544211 0100 001122333334433331 235789999999999999999886
Q ss_pred cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH---HHHHHHhhcccCCc
Q psy2408 110 KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGS 186 (298)
Q Consensus 110 ~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG 186 (298)
...+|+++|+|+.+++.+++++...+ ..++.++++|+..+++++++||+|++..+++|++++ .+++++.++|+|||
T Consensus 101 ~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 179 (241)
T 2ex4_A 101 LFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNG 179 (241)
T ss_dssp TCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCe
Confidence 56699999999999999999987654 246899999999888777899999999999999985 89999999999999
Q ss_pred EEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 187 ILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 187 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
++++.+..... . .. +.........+.+++.++|+++||+++......
T Consensus 180 ~l~i~~~~~~~--~--~~----~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 180 IIVIKDNMAQE--G--VI----LDDVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp EEEEEEEEBSS--S--EE----EETTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEEEEccCCC--c--ce----ecccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 99998765433 1 00 001111223478899999999999999887654
No 31
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.89 E-value=1.8e-22 Score=177.35 Aligned_cols=152 Identities=22% Similarity=0.246 Sum_probs=123.7
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhc-----C-C-CCceEEEECCCCCC------
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAE-----G-L-LDKVNFLHGDALNL------ 150 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~-----~-~-~~~i~~~~~d~~~~------ 150 (298)
+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++... | . ..++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999999873 569999999999999999987654 2 2 25799999999987
Q ss_pred CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHH--HHHHhhcccCCCCcchHHHHH
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFK--EYVKKNIHSNFILVEHYPDLL 227 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 227 (298)
++++++||+|+++.+++|++++ .+++++.++|||||+|++.++....... .... ...........++.+++.++|
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS--EAAQQDPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC--HHHHHCHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC--HhHhhhHHHhhcccccCCCHHHHHHHH
Confidence 8888999999999999999999 9999999999999999998876554433 2211 111222334567789999999
Q ss_pred HhCCCcEEEEEe
Q psy2408 228 NKSGFELIKIDD 239 (298)
Q Consensus 228 ~~~Gf~~~~~~~ 239 (298)
+++||.+++...
T Consensus 239 ~~aGF~~v~~~~ 250 (383)
T 4fsd_A 239 AEAGFRDVRLVS 250 (383)
T ss_dssp HHTTCCCEEEEE
T ss_pred HHCCCceEEEEe
Confidence 999998776554
No 32
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.89 E-value=1.7e-21 Score=165.43 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=119.5
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC-CCCCeeEEEecc
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF-DNDSFDGGWFFE 164 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~ 164 (298)
+.++.+|||+|||+|..+..+++....+|+|+|+|+.+++.|++++...++..++.++++|+.++++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4678899999999999999888854459999999999999999999988776789999999998877 578999999999
Q ss_pred cccc----cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHH-------------------H----h-----
Q psy2408 165 SIFH----MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYV-------------------K----K----- 211 (298)
Q Consensus 165 ~l~~----~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-------------------~----~----- 211 (298)
+++| ..+. .+++++.++|+|||++++..+.... ....+. . .
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFT 215 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH------HHHHHccCccCCeeEEEEeCccccccccccceEEEE
Confidence 9977 3445 9999999999999999998765211 000000 0 0
Q ss_pred ------hcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 212 ------NIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 212 ------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
.....+++.+++..+|+++||+++....+.
T Consensus 216 l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 216 LLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp ETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred EchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 011245678999999999999999886544
No 33
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.88 E-value=4.6e-22 Score=163.24 Aligned_cols=154 Identities=17% Similarity=0.196 Sum_probs=127.0
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
..++.....++ .+|||+|||+|..+..+++ .+.+|+|+|+|+.+++.+++++...+...+++++++|+.+++ ++++|
T Consensus 57 ~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~f 133 (235)
T 3lcc_A 57 VHLVDTSSLPL-GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELF 133 (235)
T ss_dssp HHHHHTTCSCC-EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCE
T ss_pred HHHHHhcCCCC-CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCe
Confidence 34455555544 4999999999999999987 678999999999999999999887555567999999999976 45799
Q ss_pred eEEEecccccccC--hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 158 DGGWFFESIFHMN--HS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 158 D~V~~~~~l~~~~--~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
|+|++..+++|++ +. .+++++.++|+|||++++.++....... ..+..++.+++..+|+++||++
T Consensus 134 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 134 DLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG------------GPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp EEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS------------CSSCCCCHHHHHHHHGGGTEEE
T ss_pred eEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC------------CCCccCCHHHHHHHHHHcCCeE
Confidence 9999999999998 66 9999999999999999998876543221 1223467899999999999999
Q ss_pred EEEEeCCCCccc
Q psy2408 235 IKIDDITSHVMP 246 (298)
Q Consensus 235 ~~~~~~~~~~~~ 246 (298)
+.....+..+..
T Consensus 202 ~~~~~~~~~~~~ 213 (235)
T 3lcc_A 202 VSVEENPHAIPT 213 (235)
T ss_dssp EEEEECTTCCTT
T ss_pred EEEEecCCcccc
Confidence 999887766544
No 34
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.88 E-value=4.1e-22 Score=161.46 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=133.7
Q ss_pred hhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc
Q psy2408 32 KKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK 110 (298)
Q Consensus 32 ~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~ 110 (298)
.+...++|+.. +..|+..+.. ........+++.+. +.++.+|||+|||+|.++..+++.
T Consensus 8 ~~~~~~~~~~~-a~~y~~~~~~------------------~~~~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~- 67 (218)
T 3ou2_A 8 IESQLSYYRAR-ASEYDATFVP------------------YMDSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL- 67 (218)
T ss_dssp HHHHHHHHHHH-GGGHHHHHHH------------------HHTTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-
T ss_pred HHHHHHHHHHH-HHHHHHhhhh------------------HHHHHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-
Confidence 44567888887 7777763211 11111333344433 567789999999999999999985
Q ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH---HHHHHHhhcccCCcE
Q psy2408 111 GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSI 187 (298)
Q Consensus 111 ~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~ 187 (298)
+.+|+|+|+|+.+++.+++ .+. .+++++++|+.++ +++++||+|++..+++|++++ .+++++.++|+|||.
T Consensus 68 ~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 141 (218)
T 3ou2_A 68 ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGV 141 (218)
T ss_dssp SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeE
Confidence 8899999999999999987 343 4699999999987 678999999999999999995 999999999999999
Q ss_pred EEEEeCCCCCCCCChhHHHHHHHhh------------cccCCCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 188 LTLTDLPLLSVSKNDNKFKEYVKKN------------IHSNFILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 188 l~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
+++.++....... ...+....... ....+++.+++.++|+++||+++.......+
T Consensus 142 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~ 208 (218)
T 3ou2_A 142 VEFVDVTDHERRL-EQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEVHPGF 208 (218)
T ss_dssp EEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEEETTE
T ss_pred EEEEeCCCCcccc-chhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeeccccc
Confidence 9999887632211 01010000000 0123568899999999999997766554444
No 35
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.88 E-value=2.7e-22 Score=160.94 Aligned_cols=151 Identities=11% Similarity=0.092 Sum_probs=116.9
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC-----------CCCceEEEECCC
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG-----------LLDKVNFLHGDA 147 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-----------~~~~i~~~~~d~ 147 (298)
.++..+.+.++.+|||+|||+|..+..+++. |.+|+|+|+|+.|++.|+++..... ...+++++++|+
T Consensus 13 ~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 91 (203)
T 1pjz_A 13 QYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 91 (203)
T ss_dssp HHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred HHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence 3445556678899999999999999999984 8899999999999999998864210 124699999999
Q ss_pred CCCCCCC-CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchH
Q psy2408 148 LNLPFDN-DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHY 223 (298)
Q Consensus 148 ~~~~~~~-~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
.++++++ ++||+|++..+++|++.. .++++++++|||||++++.......... ...+..++.+++
T Consensus 92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~-----------~~~~~~~~~~el 160 (203)
T 1pjz_A 92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL-----------EGPPFSVPQTWL 160 (203)
T ss_dssp SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS-----------SSCCCCCCHHHH
T ss_pred ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc-----------CCCCCCCCHHHH
Confidence 9988654 799999999999999865 7999999999999995554433221100 011223578899
Q ss_pred HHHHHhCCCcEEEEEeCCC
Q psy2408 224 PDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~~ 242 (298)
.+++++ ||+++.......
T Consensus 161 ~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 161 HRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp HHTSCS-SEEEEEEEESSC
T ss_pred HHHhcC-CcEEEEeccccc
Confidence 999988 999888776554
No 36
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.88 E-value=4.3e-22 Score=160.74 Aligned_cols=171 Identities=15% Similarity=0.178 Sum_probs=134.2
Q ss_pred chhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc
Q psy2408 31 GKKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK 110 (298)
Q Consensus 31 ~~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 110 (298)
......++|+.. +..|+..... ......++..+ .++.+|||+|||+|.++..+++.
T Consensus 9 ~~~~~~~~~~~~-~~~y~~~~~~--------------------~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~- 64 (211)
T 3e23_A 9 FDDDTLRFYRGN-ATAYAERQPR--------------------SATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAA- 64 (211)
T ss_dssp SCHHHHHHHHHS-HHHHTTCCCC--------------------CHHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHT-
T ss_pred ccHHHHHHHHHH-HHHHhhccch--------------------hHHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHc-
Confidence 345678889888 7777664321 22344455554 56889999999999999999984
Q ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccC--hH-HHHHHHhhcccCCcE
Q psy2408 111 GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMN--HS-AALNEARRVLKSGSI 187 (298)
Q Consensus 111 ~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~-~~l~~~~r~LkpgG~ 187 (298)
+.+|+|+|+|+.+++.+++++ ++.++.+|+..++ ++++||+|++..+++|++ +. .+++++.++|+|||+
T Consensus 65 ~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 136 (211)
T 3e23_A 65 GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGL 136 (211)
T ss_dssp TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcE
Confidence 789999999999999999886 3678899999888 678999999999999999 55 999999999999999
Q ss_pred EEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC-CcEEEEEeCC
Q psy2408 188 LTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG-FELIKIDDIT 241 (298)
Q Consensus 188 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 241 (298)
+++.......... . .......+++.+++.++|+++| |++++.....
T Consensus 137 l~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 137 FYASYKSGEGEGR--D------KLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp EEEEEECCSSCEE--C------TTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred EEEEEcCCCcccc--c------ccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 9998665433211 0 0112335678999999999999 9999877543
No 37
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.87 E-value=4.4e-22 Score=165.17 Aligned_cols=164 Identities=15% Similarity=0.189 Sum_probs=125.1
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
....+...+...++.+|||+|||+|..+..+++....+|+|+|+|+.+++.++++.. ..++.++++|+.+++++++
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~ 107 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPD 107 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTT
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCC
Confidence 344566777766889999999999999999998533399999999999999998865 3579999999999988889
Q ss_pred CeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCC----------hh---HHHHHHH----------h
Q psy2408 156 SFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKN----------DN---KFKEYVK----------K 211 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~----------~~---~~~~~~~----------~ 211 (298)
+||+|++..+++|++++ .+++++.++|+|||++++........... .. .+...+. .
T Consensus 108 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (253)
T 3g5l_A 108 AYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGE 187 (253)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTE
T ss_pred CeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccc
Confidence 99999999999999999 99999999999999999975442100000 00 0000000 0
Q ss_pred hcccCCCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 212 NIHSNFILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
.......+.+++.++|+++||+++++.+....
T Consensus 188 ~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 188 DVQKYHRTVTTYIQTLLKNGFQINSVIEPEPA 219 (253)
T ss_dssp EEEEECCCHHHHHHHHHHTTEEEEEEECCCCC
T ss_pred cCccEecCHHHHHHHHHHcCCeeeeeecCCCc
Confidence 00111238899999999999999998876544
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.87 E-value=1.2e-21 Score=159.06 Aligned_cols=162 Identities=16% Similarity=0.206 Sum_probs=120.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCC----ceEEEECCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLD----KVNFLHGDALN 149 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~----~i~~~~~d~~~ 149 (298)
...+.+++.+...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.+++++...+++. +++++++|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc
Confidence 3344444554445778999999999999999998543 699999999999999999988776654 79999999988
Q ss_pred CCCCCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHH--
Q psy2408 150 LPFDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYP-- 224 (298)
Q Consensus 150 ~~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (298)
.+.+.++||+|++..+++|++++ .+++++.++|+|||.++........... ............+...++.+++.
T Consensus 96 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (219)
T 3jwg_A 96 RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHY-GNLFEGNLRHRDHRFEWTRKEFQTW 174 (219)
T ss_dssp CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCC-CCT-----GGGCCTTSBCHHHHHHH
T ss_pred cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhh-cccCcccccccCceeeecHHHHHHH
Confidence 77777899999999999999976 9999999999999966655433211110 00011111223344557888888
Q ss_pred --HHHHhCCCcEEEE
Q psy2408 225 --DLLNKSGFELIKI 237 (298)
Q Consensus 225 --~~l~~~Gf~~~~~ 237 (298)
.+++++||++...
T Consensus 175 ~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 175 AVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHTEEEEEE
T ss_pred HHHHHHHCCcEEEEE
Confidence 7889999976653
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.87 E-value=8.9e-22 Score=162.22 Aligned_cols=158 Identities=17% Similarity=0.274 Sum_probs=122.1
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
.+...+...++.+|||+|||+|..+..+++. +. +++|+|+|+.+++.++++... .++.++++|+..+++++++|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCc
Confidence 4556666668899999999999999999985 66 999999999999999887543 36899999999888878899
Q ss_pred eEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh----------------hH------HHHHHHhhcc
Q psy2408 158 DGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKND----------------NK------FKEYVKKNIH 214 (298)
Q Consensus 158 D~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~----------------~~------~~~~~~~~~~ 214 (298)
|+|++..+++|++++ .+++++.++|+|||++++............ .. ...+......
T Consensus 109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (243)
T 3bkw_A 109 DLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVV 188 (243)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCC
T ss_pred eEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceE
Confidence 999999999999999 999999999999999999865321000000 00 0001111122
Q ss_pred cCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 215 SNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 215 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
...++.+++.++|+++||+++......
T Consensus 189 ~~~~t~~~~~~~l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 189 KHHRTVGTTLNALIRSGFAIEHVEEFC 215 (243)
T ss_dssp EEECCHHHHHHHHHHTTCEEEEEEECC
T ss_pred EEeccHHHHHHHHHHcCCEeeeeccCC
Confidence 233588999999999999999987654
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.87 E-value=2.1e-21 Score=159.10 Aligned_cols=151 Identities=26% Similarity=0.325 Sum_probs=123.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEECCCCCCCCCCCCeeEEEe
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGL----LDKVNFLHGDALNLPFDNDSFDGGWF 162 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~V~~ 162 (298)
+++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++ ..++.+++.|+..+++++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 57889999999999999999995 88999999999999999999887665 23689999999999888899999999
Q ss_pred cccccccChH----HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh--------------------hcccCCC
Q psy2408 163 FESIFHMNHS----AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK--------------------NIHSNFI 218 (298)
Q Consensus 163 ~~~l~~~~~~----~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 218 (298)
..+++|++++ .+++++.++|+|||++++.++....... ......... .....++
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK--LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH--HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH--HHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 9999999876 7999999999999999999876533222 111111110 1123467
Q ss_pred CcchHHHHHHhCCCcEEEEEeC
Q psy2408 219 LVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 219 ~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
+.+++.++|+++||+++++...
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEec
Confidence 8999999999999999987653
No 41
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.87 E-value=6.9e-21 Score=164.24 Aligned_cols=160 Identities=13% Similarity=0.105 Sum_probs=128.8
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
.+++.+...++.+|||+|||+|..+..+++.. +.+++++|+ +.+++.+++++...++.++++++.+|+.+ ++|. +|
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~-~~ 236 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPA-GA 236 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCC-SC
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCC-CC
Confidence 34455555667899999999999999999874 679999999 99999999999998888899999999973 5554 89
Q ss_pred eEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 158 DGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 158 D~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
|+|++..++++++++ .+|++++++|+|||++++.+.......+ ................++.++|.++|+++||++
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHA-GTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---C-CHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCc-cHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 999999999999986 9999999999999999999887655411 111221111223456788999999999999999
Q ss_pred EEEEeCCC
Q psy2408 235 IKIDDITS 242 (298)
Q Consensus 235 ~~~~~~~~ 242 (298)
++....+.
T Consensus 316 ~~~~~~~~ 323 (332)
T 3i53_A 316 RAAHPISY 323 (332)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99887654
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.87 E-value=1.1e-21 Score=167.26 Aligned_cols=158 Identities=16% Similarity=0.165 Sum_probs=126.2
Q ss_pred CCCCCeEEEeCCCCCHHHHHHH--HhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEec
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLA--KAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFF 163 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~--~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~ 163 (298)
+.++.+|||+|||+|..+..++ ...+.+|+|+|+|+.+++.+++++...++.++++++++|+.+++++ ++||+|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 4678899999999999999985 3247899999999999999999999888877899999999999877 899999999
Q ss_pred ccccccChH-H---HHHHHhhcccCCcEEEEEeCCCCCCCCChh-------------HHHHHHHhhc---ccCCCCcchH
Q psy2408 164 ESIFHMNHS-A---ALNEARRVLKSGSILTLTDLPLLSVSKNDN-------------KFKEYVKKNI---HSNFILVEHY 223 (298)
Q Consensus 164 ~~l~~~~~~-~---~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~ 223 (298)
.+++|++++ . +++++.++|+|||++++.++.......... .....+.... ...+++.+++
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 999999888 3 799999999999999998866433211000 0011111111 2245789999
Q ss_pred HHHHHhCCCcEEEEEeCCCCc
Q psy2408 224 PDLLNKSGFELIKIDDITSHV 244 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~~~~ 244 (298)
.++|+++||+++.......+.
T Consensus 275 ~~~l~~aGF~~v~~~~~~~~~ 295 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRARL 295 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTSS
T ss_pred HHHHHHCCCEEEEEEcccCce
Confidence 999999999999988755443
No 43
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.87 E-value=8.6e-22 Score=159.66 Aligned_cols=159 Identities=16% Similarity=0.129 Sum_probs=117.6
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCC----ceEEEECCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLD----KVNFLHGDALNLP 151 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~----~i~~~~~d~~~~~ 151 (298)
.+.+++.+...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.+++++...+++. ++.++++|+...+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 34444554445778999999999999999998643 699999999999999999988777653 7999999998777
Q ss_pred CCCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHH----
Q psy2408 152 FDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYP---- 224 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (298)
.+.++||+|++..+++|++++ .+++++.++|+|||.+++.......... ............+...++.+++.
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKF-ANLPAGKLRHKDHRFEWTRSQFQNWAN 176 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHT-C-----------CCSCBCHHHHHHHHH
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhh-cccccccccccccccccCHHHHHHHHH
Confidence 667899999999999999976 9999999999999977765432100000 00000001112234457888888
Q ss_pred HHHHhCCCcEEE
Q psy2408 225 DLLNKSGFELIK 236 (298)
Q Consensus 225 ~~l~~~Gf~~~~ 236 (298)
.+++++||+++.
T Consensus 177 ~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 177 KITERFAYNVQF 188 (217)
T ss_dssp HHHHHSSEEEEE
T ss_pred HHHHHcCceEEE
Confidence 888999998754
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.87 E-value=5.3e-21 Score=161.38 Aligned_cols=160 Identities=20% Similarity=0.304 Sum_probs=125.2
Q ss_pred HHHHHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 76 LSRIMINKT-SITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 76 ~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
....+++.+ .+.++.+|||+|||+|.++..+++.. +++|+|+|+|+.+++.+++++...+. +++++++|+.++++
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc
Confidence 344455444 55788999999999999999999864 47999999999999999999886553 79999999999887
Q ss_pred CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC-----C--C-CC-----ChhHHHHHHH---hhccc
Q psy2408 153 DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL-----S--V-SK-----NDNKFKEYVK---KNIHS 215 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~-----~--~-~~-----~~~~~~~~~~---~~~~~ 215 (298)
+ ++||+|++..+++|++++ .+++++.++|+|||++++.++.+. - . .. ....+..... .....
T Consensus 87 ~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (284)
T 3gu3_A 87 N-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGK 165 (284)
T ss_dssp S-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCC
T ss_pred C-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcc
Confidence 4 699999999999999999 999999999999999999987721 0 0 00 0111222211 12234
Q ss_pred CCCCcchHHHHHHhCCCcEEEEE
Q psy2408 216 NFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 216 ~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
.+.+..++..+|+++||..+...
T Consensus 166 ~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 166 DGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp CTTGGGTHHHHHHHTTCEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEE
Confidence 56677899999999999988764
No 45
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.87 E-value=6.9e-21 Score=153.58 Aligned_cols=175 Identities=19% Similarity=0.227 Sum_probs=128.1
Q ss_pred hhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEE
Q psy2408 37 TLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVD 115 (298)
Q Consensus 37 ~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~ 115 (298)
++||.. ++.|+..+... ......+....++..+.. ++.+|||+|||+|..+..+ +. +++
T Consensus 1 ~~fd~~-a~~y~~~~~~~--------------~~~~~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~ 60 (211)
T 2gs9_A 1 DPFASL-AEAYEAWYGTP--------------LGAYVIAEEERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKV 60 (211)
T ss_dssp CTTTTT-TTTTTGGGGSH--------------HHHHHHHHHHHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEE
T ss_pred CchhhH-HHHHHHHhccc--------------chhhhHHHHHHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEE
Confidence 367777 77777654321 112222344455555543 7889999999999998877 56 999
Q ss_pred EEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 116 GITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 116 ~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++|+|+.+++.++++. .++.++++|+.++++++++||+|++..+++|++++ .+++++.++|+|||.+++.+++
T Consensus 61 ~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 61 GVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999999999999875 35899999999998888899999999999999999 9999999999999999999876
Q ss_pred CCCCCCChhHHHHHHH----hhcccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 195 LLSVSKNDNKFKEYVK----KNIHSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 195 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
...... ........ ...+.++++.+++.++|+ | .+........
T Consensus 135 ~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G-~~~~~~~~~~ 181 (211)
T 2gs9_A 135 ALSPWA--ALYRRLGEKGVLPWAQARFLAREDLKALLG--P-PEAEGEAVFL 181 (211)
T ss_dssp TTSHHH--HHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S-CSEEEEECCS
T ss_pred CcCcHH--HHHHHHhhccCccccccccCCHHHHHHHhc--C-cceeEEEEEe
Confidence 443211 11111111 112456789999999998 7 4444444333
No 46
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.86 E-value=7.9e-20 Score=159.72 Aligned_cols=162 Identities=17% Similarity=0.130 Sum_probs=133.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
.....+++.+...++.+|||+|||+|..+..+++.. +.+++++|+ +.+++.+++.+...++.++++++.+|+. .+++
T Consensus 189 ~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p 266 (369)
T 3gwz_A 189 TEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIP 266 (369)
T ss_dssp HHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCC
T ss_pred hhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCC
Confidence 335667777877888999999999999999999874 679999999 9999999999999888889999999998 4555
Q ss_pred CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChh-HH-HHHHHhhcccCCCCcchHHHHHH
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDN-KF-KEYVKKNIHSNFILVEHYPDLLN 228 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~ 228 (298)
. +||+|++..++++++++ .+|++++++|+|||++++.+........ .. .. ............++.++|.++|+
T Consensus 267 ~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPA-ASTLFVDLLLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC-HHHHHHHHHHHHHHSCCCBCHHHHHHHHH
T ss_pred C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-CchhHhhHHHHhhcCCccCCHHHHHHHHH
Confidence 5 89999999999999988 7999999999999999999887665433 11 01 11111123456788999999999
Q ss_pred hCCCcEEEEEeC
Q psy2408 229 KSGFELIKIDDI 240 (298)
Q Consensus 229 ~~Gf~~~~~~~~ 240 (298)
++||+++++...
T Consensus 345 ~aGf~~~~~~~~ 356 (369)
T 3gwz_A 345 KSGLRVERSLPC 356 (369)
T ss_dssp TTTEEEEEEEEC
T ss_pred HCCCeEEEEEEC
Confidence 999999998774
No 47
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-20 Score=159.56 Aligned_cols=156 Identities=13% Similarity=0.136 Sum_probs=116.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEECCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA--KGCRVDGITISKFQQESAMKTAKAE-GLLDKVNFLHGDALNLP 151 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~i~~~~~d~~~~~ 151 (298)
.+.+.+..... .++.+|||+|||+|..+..+++. .+.+|+|+|+|+.+++.|++++... +...+++++++|+.+++
T Consensus 24 ~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 24 DFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp HHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred HHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 34455555443 57889999999999999999974 4789999999999999999998876 44568999999999987
Q ss_pred CCC------CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC---CCCCChhHHHHHHHh--hcccCC--
Q psy2408 152 FDN------DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL---SVSKNDNKFKEYVKK--NIHSNF-- 217 (298)
Q Consensus 152 ~~~------~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~---~~~~~~~~~~~~~~~--~~~~~~-- 217 (298)
+++ ++||+|++..+++|+ ++ .+++++.++|+|||.+++.++... ........+..+... ...+.+
T Consensus 103 ~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 181 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQ 181 (299)
T ss_dssp GGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCT
T ss_pred ccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhc
Confidence 766 899999999999999 88 999999999999999998544321 111111222222211 112222
Q ss_pred CCcchHHHHHHhCCC
Q psy2408 218 ILVEHYPDLLNKSGF 232 (298)
Q Consensus 218 ~~~~~~~~~l~~~Gf 232 (298)
...+.+.+.++++||
T Consensus 182 p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 182 PGRSRLRNMLKDSHL 196 (299)
T ss_dssp THHHHHHTTTTTCCC
T ss_pred hhhHHHHHhhhccCC
Confidence 234557888999999
No 48
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.86 E-value=9.9e-22 Score=167.10 Aligned_cols=165 Identities=15% Similarity=0.202 Sum_probs=123.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEECCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLL--DKVNFLHGDALNLPF 152 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~i~~~~~d~~~~~~ 152 (298)
.....+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. .++.++++|+.++++
T Consensus 70 ~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 445556666654444 9999999999999999985 789999999999999999998876532 479999999999887
Q ss_pred CCCCeeEEEec-ccccccCh--H-HHHHHHhhcccCCcEEEEEeCCCCCC----CCChhHHHHHHH--------------
Q psy2408 153 DNDSFDGGWFF-ESIFHMNH--S-AALNEARRVLKSGSILTLTDLPLLSV----SKNDNKFKEYVK-------------- 210 (298)
Q Consensus 153 ~~~~fD~V~~~-~~l~~~~~--~-~~l~~~~r~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~-------------- 210 (298)
+++||+|++. .+++++++ . .+|+++.++|+|||+|++..+..... ......+.....
T Consensus 148 -~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 226 (299)
T 3g2m_A 148 -DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEE 226 (299)
T ss_dssp -SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEE
T ss_pred -CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEecccc
Confidence 6899999865 66777764 3 99999999999999999988765321 000000000000
Q ss_pred ------------------hhcccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 211 ------------------KNIHSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 211 ------------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
......+++.+++..+|+++||+++....+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 227 IQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp EEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 00112356899999999999999999988763
No 49
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.86 E-value=1.3e-21 Score=161.99 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=96.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
.+.+.+.+.. ..+.+|||||||+|..+..+++ .+.+|+|+|+|+.|++.|++. .++.++++|+.++++++
T Consensus 28 ~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~-~~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~ 97 (257)
T 4hg2_A 28 ALFRWLGEVA--PARGDALDCGCGSGQASLGLAE-FFERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPP 97 (257)
T ss_dssp HHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHT-TCSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCS
T ss_pred HHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHH-hCCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccC
Confidence 4556666665 3456999999999999999998 578999999999999887532 47999999999999999
Q ss_pred CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 155 DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
++||+|++..+++++..+.++++++|+|||||+|++..+....
T Consensus 98 ~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp SCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred CcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 9999999999998876449999999999999999998776544
No 50
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.86 E-value=2.9e-20 Score=160.58 Aligned_cols=165 Identities=15% Similarity=0.249 Sum_probs=132.8
Q ss_pred HHHHHHHhCCC--CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 76 LSRIMINKTSI--TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 76 ~~~~l~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
....+++.+.. .++.+|||+|||+|..+..+++.. +.+++++|+| .+++.+++++...++.++++++.+|+.+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC
Confidence 34466666666 778899999999999999999874 6799999999 9999999999988887789999999988766
Q ss_pred CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH-----hhcccCCCCcchHH
Q psy2408 153 DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK-----KNIHSNFILVEHYP 224 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 224 (298)
+. .||+|++..++++++++ .+++++.++|+|||++++.++......... ....... .......++.++|.
T Consensus 230 ~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~ 307 (335)
T 2r3s_A 230 GN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP-PDAAAFSLVMLATTPNGDAYTFAEYE 307 (335)
T ss_dssp CS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS-HHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred CC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc-hHHHHHHHHHHeeCCCCCcCCHHHHH
Confidence 54 49999999999999765 999999999999999999988765432211 1111111 11145678899999
Q ss_pred HHHHhCCCcEEEEEeCCCC
Q psy2408 225 DLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 225 ~~l~~~Gf~~~~~~~~~~~ 243 (298)
++++++||+++++..+...
T Consensus 308 ~ll~~aGf~~~~~~~~~~~ 326 (335)
T 2r3s_A 308 SMFSNAGFSHSQLHSLPTT 326 (335)
T ss_dssp HHHHHTTCSEEEEECCTTS
T ss_pred HHHHHCCCCeeeEEECCCC
Confidence 9999999999998876543
No 51
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.85 E-value=2.5e-21 Score=159.70 Aligned_cols=148 Identities=16% Similarity=0.153 Sum_probs=115.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc-cc
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE-SI 166 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l 166 (298)
++.+|||+|||+|..+..+++. +.+++|+|+|+.+++.+++++...+. ++.++++|+.+++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 6789999999999999999984 78999999999999999999887664 689999999988876 8999999998 99
Q ss_pred cccC---hH-HHHHHHhhcccCCcEEEEEeCCCCCC---CCCh------h----HHHHH---------------------
Q psy2408 167 FHMN---HS-AALNEARRVLKSGSILTLTDLPLLSV---SKND------N----KFKEY--------------------- 208 (298)
Q Consensus 167 ~~~~---~~-~~l~~~~r~LkpgG~l~i~~~~~~~~---~~~~------~----~~~~~--------------------- 208 (298)
+|++ +. .+++++.++|+|||++++........ .... . .+...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYK 192 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCccc
Confidence 9994 44 99999999999999999865442100 0000 0 00000
Q ss_pred -HHhhcccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 209 -VKKNIHSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
.....+..+++.+++.++|+++||++++...
T Consensus 193 ~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 193 RFDEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 0001123567899999999999999998764
No 52
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.85 E-value=3.1e-20 Score=151.51 Aligned_cols=165 Identities=18% Similarity=0.333 Sum_probs=127.8
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC--CCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN--LPFDND 155 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~ 155 (298)
..+++.+. .++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++.. .+++++|+.+ .+++++
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTT
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCC
Confidence 45566665 67889999999999999999996 789999999999999887653 3688999876 466778
Q ss_pred CeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh-----------hcccCCCCcchH
Q psy2408 156 SFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK-----------NIHSNFILVEHY 223 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 223 (298)
+||+|++..+++|++++ .+++++.++|+|||++++..+..... ......... ..+..+++.+++
T Consensus 93 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI----SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEM 168 (230)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH----HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHH
T ss_pred ccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH----HHHHHHhcCCceeccCCCCCcceEEEecHHHH
Confidence 99999999999999999 99999999999999999987663221 111111111 112356789999
Q ss_pred HHHHHhCCCcEEEEEeCCCCcccchHHHHHHHHHH
Q psy2408 224 PDLLNKSGFELIKIDDITSHVMPLLVPKLTEATLT 258 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (298)
.++|+++||+++....+.... . ....|...+..
T Consensus 169 ~~~l~~~Gf~~~~~~~~~~~~-~-~~~~~~~~l~~ 201 (230)
T 3cc8_A 169 LRMFLKAGYSISKVDRVYVDH-K-MYEPLIEELYG 201 (230)
T ss_dssp HHHHHHTTEEEEEEEEEECCC-G-GGHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEEecccCh-h-hccchHHHHHH
Confidence 999999999999988877665 3 44555555443
No 53
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.85 E-value=4.1e-21 Score=162.74 Aligned_cols=157 Identities=15% Similarity=0.191 Sum_probs=110.6
Q ss_pred HHHHhCC-CCCCCeEEEeCCCCCHHHHHHH----Hh-cCCeE--EEEeCCHHHHHHHHHHHHhc-CCCCceEE--EECCC
Q psy2408 79 IMINKTS-ITKGQRFIDIGCGFGLSGIRLA----KA-KGCRV--DGITISKFQQESAMKTAKAE-GLLDKVNF--LHGDA 147 (298)
Q Consensus 79 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~----~~-~~~~v--~~vD~s~~~l~~a~~~~~~~-~~~~~i~~--~~~d~ 147 (298)
.++..++ ..++.+|||||||+|.++..++ .. .+.++ +++|+|+.|++.|++++... ++ .++.+ ...++
T Consensus 42 ~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~ 120 (292)
T 2aot_A 42 GIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETS 120 (292)
T ss_dssp HHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCH
T ss_pred hHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecch
Confidence 3344443 3567899999999998765443 22 24544 99999999999999998753 33 34544 45555
Q ss_pred CCCC------CCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhh---cccCC
Q psy2408 148 LNLP------FDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKN---IHSNF 217 (298)
Q Consensus 148 ~~~~------~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 217 (298)
.+++ +++++||+|++..+++|++++ .+|++++|+|||||++++......... ...+....... .+..+
T Consensus 121 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 198 (292)
T 2aot_A 121 SEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGW--DKLWKKYGSRFPQDDLCQY 198 (292)
T ss_dssp HHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHH--HHHHHHHGGGSCCCTTCCC
T ss_pred hhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccH--HHHHHHHHHhccCCCcccC
Confidence 4432 457899999999999999999 999999999999999999865532110 01111211111 12356
Q ss_pred CCcchHHHHHHhCCCcEEEEE
Q psy2408 218 ILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 218 ~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
++.+++.++|+++||.++...
T Consensus 199 ~~~~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 199 ITSDDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp CCHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEE
Confidence 788999999999999988644
No 54
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.85 E-value=3.2e-21 Score=150.20 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=117.6
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeE
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDG 159 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 159 (298)
+++.+.+.++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++ .+++.++..| .++++++||+
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEE
Confidence 3444456788899999999999999999865 4999999999999999988 2468999999 5667889999
Q ss_pred EEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 160 GWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 160 V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
|++..+++|++++ .+++++.++|+|||++++.++........ ......++.+++.++++ ||++++..
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIG----------PPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS----------SCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccC----------chHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 9999999999999 99999999999999999998775442220 11234578899999998 99999988
Q ss_pred eCCCC
Q psy2408 239 DITSH 243 (298)
Q Consensus 239 ~~~~~ 243 (298)
.++..
T Consensus 147 ~~~~~ 151 (170)
T 3i9f_A 147 NPTPY 151 (170)
T ss_dssp CSSTT
T ss_pred CCCCc
Confidence 87644
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.85 E-value=4.1e-20 Score=147.48 Aligned_cols=148 Identities=16% Similarity=0.159 Sum_probs=121.2
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCee
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFD 158 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 158 (298)
.+++.+...++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++++...+++ ++.++++|+.++++ +++||
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-CCCEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-CCCce
Confidence 3455555567789999999999999999985 789999999999999999999887763 59999999998877 78999
Q ss_pred EEEecccccccC--hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 159 GGWFFESIFHMN--HS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 159 ~V~~~~~l~~~~--~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
+|++..+++|++ +. .+++++.++|+|||++++.+......... .......++.+++.+++++ |+++
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~--f~~~ 168 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC---------TVGFPFAFKEGELRRYYEG--WERV 168 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---------CSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC---------CCCCCCccCHHHHHHHhcC--CeEE
Confidence 999999999998 55 99999999999999988876554332220 0123346788999999986 9988
Q ss_pred EEEeC
Q psy2408 236 KIDDI 240 (298)
Q Consensus 236 ~~~~~ 240 (298)
...+.
T Consensus 169 ~~~~~ 173 (199)
T 2xvm_A 169 KYNED 173 (199)
T ss_dssp EEECC
T ss_pred Eeccc
Confidence 87654
No 56
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.84 E-value=5.6e-20 Score=153.36 Aligned_cols=161 Identities=16% Similarity=0.231 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 69 FAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 69 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
+......+.+.+...+ +++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++. ++.++++|+.
T Consensus 33 ~~~~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~ 103 (263)
T 3pfg_A 33 YHREAADLAALVRRHS--PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMR 103 (263)
T ss_dssp HHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTT
T ss_pred HHHHHHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChH
Confidence 3444455556665554 45689999999999999999984 7799999999999999998753 5899999999
Q ss_pred CCCCCCCCeeEEEecc-cccccChH----HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHH-----------------
Q psy2408 149 NLPFDNDSFDGGWFFE-SIFHMNHS----AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFK----------------- 206 (298)
Q Consensus 149 ~~~~~~~~fD~V~~~~-~l~~~~~~----~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~----------------- 206 (298)
++++ +++||+|++.. +++|++++ .+++++.++|+|||++++.++.............
T Consensus 104 ~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (263)
T 3pfg_A 104 DFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSS 182 (263)
T ss_dssp TCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEE
T ss_pred HCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEE
Confidence 9877 68999999998 99999743 8899999999999999997554333211000000
Q ss_pred ----------HH-----------HHhhcccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 207 ----------EY-----------VKKNIHSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 207 ----------~~-----------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
.+ ........+++.+++.++|+++||+++.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 236 (263)
T 3pfg_A 183 REGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPG 236 (263)
T ss_dssp EETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred ecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeC
Confidence 00 0000113467899999999999999988754
No 57
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.84 E-value=2.7e-21 Score=157.47 Aligned_cols=188 Identities=14% Similarity=0.178 Sum_probs=132.2
Q ss_pred CchhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh
Q psy2408 30 KGKKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA 109 (298)
Q Consensus 30 ~~~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 109 (298)
...+.+.++|+.. +..|+...... ............++..+...++.+|||+|||+|.++..+++.
T Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~ 73 (227)
T 3e8s_A 8 NPEDALLDSWHQN-AQAWIDAVRHG-------------AIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR 73 (227)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHT-------------CCHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT
T ss_pred cHHHHHHHHHHhh-HHHHHHHhccc-------------ccccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC
Confidence 3456778899887 66776532111 011111223334444444456789999999999999999985
Q ss_pred cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC---CCC-CCCeeEEEecccccccChH-HHHHHHhhcccC
Q psy2408 110 KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL---PFD-NDSFDGGWFFESIFHMNHS-AALNEARRVLKS 184 (298)
Q Consensus 110 ~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~~fD~V~~~~~l~~~~~~-~~l~~~~r~Lkp 184 (298)
+.+|+|+|+|+.+++.++++ .++.+...|+.++ ++. .++||+|++..+++ ..++ .+++++.++|+|
T Consensus 74 -~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~p 144 (227)
T 3e8s_A 74 -GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVP 144 (227)
T ss_dssp -TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEE
T ss_pred -CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCC
Confidence 88999999999999999877 3467888887765 433 34599999999999 6677 999999999999
Q ss_pred CcEEEEEeCCCCCCCCC--hhHH-----HHHHH--hhcccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 185 GSILTLTDLPLLSVSKN--DNKF-----KEYVK--KNIHSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 185 gG~l~i~~~~~~~~~~~--~~~~-----~~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
||++++.++........ ...+ ..... ......+++.+++.++|+++||+++++...
T Consensus 145 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 145 GGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp EEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECC
T ss_pred CeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecC
Confidence 99999998765432210 0000 00000 012234568999999999999999988763
No 58
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.84 E-value=2.9e-20 Score=153.58 Aligned_cols=143 Identities=14% Similarity=0.174 Sum_probs=111.1
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh----------c------CCCCceEEEECCCCC
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKA----------E------GLLDKVNFLHGDALN 149 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~----------~------~~~~~i~~~~~d~~~ 149 (298)
+.++.+|||+|||+|..+..|++ .|.+|+|+|+|+.|++.|+++... . ....+++++++|+.+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFAD-RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHH-CCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35778999999999999999998 588999999999999999876531 0 012469999999999
Q ss_pred CCCCC-CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHH
Q psy2408 150 LPFDN-DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPD 225 (298)
Q Consensus 150 ~~~~~-~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (298)
+++++ ++||+|++..++++++.. .+++++.++|||||++++.++....... ...+..++.+++..
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~-----------~g~~~~~~~~el~~ 213 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH-----------AGPPFYVPSAELKR 213 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC-----------CCSSCCCCHHHHHH
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC-----------CCCCCCCCHHHHHH
Confidence 87654 799999999999999764 7999999999999999765444221100 01122367889999
Q ss_pred HHHhCCCcEEEEEeCC
Q psy2408 226 LLNKSGFELIKIDDIT 241 (298)
Q Consensus 226 ~l~~~Gf~~~~~~~~~ 241 (298)
++.. +|+++......
T Consensus 214 ~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 214 LFGT-KCSMQCLEEVD 228 (252)
T ss_dssp HHTT-TEEEEEEEEEE
T ss_pred HhhC-CeEEEEEeccc
Confidence 9987 59988776543
No 59
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.84 E-value=1.5e-19 Score=158.50 Aligned_cols=161 Identities=17% Similarity=0.154 Sum_probs=127.8
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDS 156 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 156 (298)
..+++.+.+.++.+|||||||+|.++..+++.. +.+++++|+ +.+++.+++++...++.++++++.+|+.+ +++. .
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-T 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-C
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-C
Confidence 456677777788999999999999999999874 679999999 99999999999988887789999999976 4443 4
Q ss_pred eeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeC--CCCCCCCChhHHHHHHH----hhcccCCCCcchHHHHH
Q psy2408 157 FDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDL--PLLSVSKNDNKFKEYVK----KNIHSNFILVEHYPDLL 227 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l 227 (298)
||+|++..++++++++ .+++++.++|+|||++++.+. ....... ..+..... .......++.++|.++|
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD--RFFSTLLDLRMLTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC--cchhhhcchHHHHhCCCcCCCHHHHHHHH
Confidence 9999999999999987 899999999999999999988 5332211 11111111 11235668999999999
Q ss_pred HhCCCcEEEEEeCCCC
Q psy2408 228 NKSGFELIKIDDITSH 243 (298)
Q Consensus 228 ~~~Gf~~~~~~~~~~~ 243 (298)
+++||++++....+..
T Consensus 327 ~~aGf~~~~~~~~~~~ 342 (374)
T 1qzz_A 327 GSAGLALASERTSGST 342 (374)
T ss_dssp HTTTEEEEEEEEECCS
T ss_pred HHCCCceEEEEECCCC
Confidence 9999999988876543
No 60
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.84 E-value=3.9e-20 Score=161.35 Aligned_cols=152 Identities=15% Similarity=0.190 Sum_probs=122.7
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~ 163 (298)
..+.+|||||||+|..+..+++.. +.+++++|+ +.+++.|++++...++.++++++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 456799999999999999999874 679999999 999999999998888777899999999885 465 789999999
Q ss_pred ccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHH--H---H--HhhcccCCCCcchHHHHHHhCCCc
Q psy2408 164 ESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKE--Y---V--KKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 164 ~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~--~---~--~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
.++++++++ .+|++++++|+|||++++.+............+.. . . ........++.++|.++|+++||+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 999999887 88999999999999999999876654331111100 0 0 011223467899999999999999
Q ss_pred EEEEEeC
Q psy2408 234 LIKIDDI 240 (298)
Q Consensus 234 ~~~~~~~ 240 (298)
++++...
T Consensus 336 ~v~~~~~ 342 (363)
T 3dp7_A 336 VEEIQDN 342 (363)
T ss_dssp ESCCCCC
T ss_pred EEEEEeC
Confidence 8876643
No 61
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.84 E-value=3.7e-20 Score=152.47 Aligned_cols=131 Identities=22% Similarity=0.309 Sum_probs=103.3
Q ss_pred hhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEE
Q psy2408 38 LYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGI 117 (298)
Q Consensus 38 ~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~v 117 (298)
+|+.. +..|+...... . .....+.+...+ .++.+|||+|||+|..+..+++. .+++|+
T Consensus 3 ~y~~~-a~~yd~~~~~~-------------~----~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~v 60 (243)
T 3d2l_A 3 AYEQF-AYVYDELMQDV-------------P----YPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGV 60 (243)
T ss_dssp ---CT-THHHHHHTTTC-------------C----HHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEE
T ss_pred hHHHH-HHHHHHhhhcc-------------c----HHHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEE
Confidence 57777 77777654211 1 123455566665 45689999999999999999885 799999
Q ss_pred eCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc-cccccCh---H-HHHHHHhhcccCCcEEEEEe
Q psy2408 118 TISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE-SIFHMNH---S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 118 D~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~---~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
|+|+.+++.+++++...+ .++.++++|+.+++++ ++||+|++.. +++|+.+ . .+++++.++|+|||++++..
T Consensus 61 D~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 61 DLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 999999999999988765 4689999999988765 7899999986 9999843 3 89999999999999999864
Q ss_pred C
Q psy2408 193 L 193 (298)
Q Consensus 193 ~ 193 (298)
.
T Consensus 138 ~ 138 (243)
T 3d2l_A 138 H 138 (243)
T ss_dssp E
T ss_pred C
Confidence 4
No 62
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.84 E-value=2.6e-21 Score=163.69 Aligned_cols=147 Identities=16% Similarity=0.088 Sum_probs=108.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc-----------------CCC------------C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAE-----------------GLL------------D 138 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----------------~~~------------~ 138 (298)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|++++... +.. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 67899999999999554444435679999999999999998865421 100 0
Q ss_pred ceEEEECCCCC-CCC-----CCCCeeEEEecccccc----cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHH
Q psy2408 139 KVNFLHGDALN-LPF-----DNDSFDGGWFFESIFH----MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKE 207 (298)
Q Consensus 139 ~i~~~~~d~~~-~~~-----~~~~fD~V~~~~~l~~----~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 207 (298)
.+.++.+|+.+ +|+ ++++||+|+++.+++| ++++ .+|+++.++|||||+|++..........
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~------- 223 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYL------- 223 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEE-------
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEE-------
Confidence 14677789987 553 3467999999999999 5567 9999999999999999997533211000
Q ss_pred HHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 208 YVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
.........+++.+++.++|+++||+++....+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 224 AGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 0011112456789999999999999999877655
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.84 E-value=2.5e-20 Score=151.86 Aligned_cols=168 Identities=24% Similarity=0.301 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 70 AQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
......+...+.+.+. ++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++++...+ .+++++++|+.+
T Consensus 22 ~~~~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~ 96 (227)
T 1ve3_A 22 RSRIETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTS
T ss_pred HHHHHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhc
Confidence 3445566666666653 4789999999999999999884 5599999999999999999988765 569999999999
Q ss_pred CCCCCCCeeEEEeccc--ccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCC--hh---HHHHHHHhh-c-------
Q psy2408 150 LPFDNDSFDGGWFFES--IFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKN--DN---KFKEYVKKN-I------- 213 (298)
Q Consensus 150 ~~~~~~~fD~V~~~~~--l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~--~~---~~~~~~~~~-~------- 213 (298)
+++++++||+|++..+ +++..++ .+++++.++|+|||++++.++........ .. ....+.... .
T Consensus 97 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (227)
T 1ve3_A 97 LSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTV 176 (227)
T ss_dssp CCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEE
T ss_pred CCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEE
Confidence 8877789999999999 5555566 99999999999999999987653221100 00 000000000 0
Q ss_pred ------------ccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 214 ------------HSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 214 ------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
........++.++|+++||..++...++.
T Consensus 177 ~~~~~~~~~~~~~~~~~w~~~~~~~l~~~GF~~v~~~~~~~ 217 (227)
T 1ve3_A 177 VIEFKSEQDSFRVRFNVWGKTGVELLAKLYFTKEAEEKVGN 217 (227)
T ss_dssp EEEC-----CCEEEEECCCHHHHHHHHTTTEEEEEEEEETT
T ss_pred EEEeccchhhheeehhhhchHHHHHHHHHhhhHHHHHHhCC
Confidence 00011124788999999999999888764
No 64
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.84 E-value=3.8e-19 Score=154.98 Aligned_cols=162 Identities=15% Similarity=0.214 Sum_probs=130.9
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
.....+++.+...++.+|||||||+|..+..+++.. +.+++++|+ +.+++.+++++...+++++++++.+|+.+.+++
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 345577788877888999999999999999999874 679999999 999999999999888877899999999987765
Q ss_pred CCCeeEEEecccccccCh--H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh---hccc----CCCCcchH
Q psy2408 154 NDSFDGGWFFESIFHMNH--S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK---NIHS----NFILVEHY 223 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~--~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~ 223 (298)
+ +|+|++..+++++++ . .+++++.++|+|||++++.++....... + ........ .... .+++.++|
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~t~~e~ 331 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPEN-P-NFDYLSHYILGAGMPFSVLGFKEQARY 331 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTS-C-CHHHHHHHGGGGGSSCCCCCCCCGGGH
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCC-c-hHHHHHHHHHhcCCCCcccCCCCHHHH
Confidence 4 399999999999998 4 9999999999999999998877654311 1 11111111 1112 23899999
Q ss_pred HHHHHhCCCcEEEEEeCC
Q psy2408 224 PDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~ 241 (298)
.++|+++||++++...++
T Consensus 332 ~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 332 KEILESLGYKDVTMVRKY 349 (359)
T ss_dssp HHHHHHHTCEEEEEEEET
T ss_pred HHHHHHCCCceEEEEecC
Confidence 999999999999887765
No 65
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.83 E-value=8.7e-20 Score=151.96 Aligned_cols=156 Identities=22% Similarity=0.295 Sum_probs=114.3
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
.+.+.+...+. ++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. . .++++|+.++++++
T Consensus 43 ~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 43 LIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCT
T ss_pred HHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCC
Confidence 33444444443 7789999999999999999984 7899999999999999998753 1 28899999998888
Q ss_pred CCeeEEEeccccccc-ChH-HHHHHHhhcccCCcEEEEEeCCCCCCC------CChhHHHHHHHhhc----------ccC
Q psy2408 155 DSFDGGWFFESIFHM-NHS-AALNEARRVLKSGSILTLTDLPLLSVS------KNDNKFKEYVKKNI----------HSN 216 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~-~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~------~~~~~~~~~~~~~~----------~~~ 216 (298)
++||+|++..++.|+ +++ .+++++.++|+|||++++..++..... ..-........... ...
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSY 192 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEE
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEe
Confidence 999999998877766 667 999999999999999999876632100 00000001111110 112
Q ss_pred CCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 217 FILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 217 ~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
+++.+++.++ +||+++....+...
T Consensus 193 ~~~~~~l~~l---aGf~~~~~~~~~~~ 216 (260)
T 2avn_A 193 AFKPEDLDSL---EGFETVDIRGIGVM 216 (260)
T ss_dssp CBCGGGGSSC---TTEEEEEEEEECSS
T ss_pred ccCHHHHHHh---cCceEEEEECCCCc
Confidence 6788888777 99999988876544
No 66
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.83 E-value=1.3e-20 Score=154.91 Aligned_cols=158 Identities=14% Similarity=0.196 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 71 QGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
.....+.+.+.... .++.+|||+|||+|..+..+++. +.+++|+|+|+.+++.++++. .++.++++|+.++
T Consensus 25 ~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 25 AEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTC
T ss_pred HHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHc
Confidence 34444555555544 56789999999999999999985 459999999999999998874 3589999999988
Q ss_pred CCCCCCeeEEEe-cccccccCh---H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhH---------------------
Q psy2408 151 PFDNDSFDGGWF-FESIFHMNH---S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNK--------------------- 204 (298)
Q Consensus 151 ~~~~~~fD~V~~-~~~l~~~~~---~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--------------------- 204 (298)
++ +++||+|++ ..+++|+++ . .+++++.++|+|||++++.++...........
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVRE 174 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEE
T ss_pred cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecC
Confidence 76 679999995 559999954 3 99999999999999999987654432210000
Q ss_pred -------HHHHHHh----------hcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 205 -------FKEYVKK----------NIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 205 -------~~~~~~~----------~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
....... ..+..+++.+++..+|+++||.++...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~ 225 (239)
T 3bxo_A 175 GNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLE 225 (239)
T ss_dssp TTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred CCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeE
Confidence 0000000 012246789999999999999877654
No 67
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.83 E-value=1.2e-19 Score=157.67 Aligned_cols=157 Identities=13% Similarity=0.192 Sum_probs=127.4
Q ss_pred HHHHhCCCCC-CCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCCC
Q psy2408 79 IMINKTSITK-GQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDND 155 (298)
Q Consensus 79 ~l~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~ 155 (298)
.+++.+.+.+ +.+|||||||+|.++..+++.. +.+++++|+ +.+++.+++.+...++.++++++.+|+.+.+ +..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 5677777667 8899999999999999999874 679999999 8899999999998888778999999998865 1346
Q ss_pred CeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH-----hhcccCCCCcchHHHHH
Q psy2408 156 SFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK-----KNIHSNFILVEHYPDLL 227 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 227 (298)
+||+|++..++++++++ .++++++++|+|||++++.+.........+. ...... .......++.++|.++|
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA-LSADFSLHMMVNTNHGELHPTPWIAGVV 326 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH-HHHHHHHHHHHHSTTCCCCCHHHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc-hHHHhhHHHHhhCCCCCcCCHHHHHHHH
Confidence 79999999999999986 9999999999999999999887655432111 111111 11234578899999999
Q ss_pred HhCCCcEEEE
Q psy2408 228 NKSGFELIKI 237 (298)
Q Consensus 228 ~~~Gf~~~~~ 237 (298)
+++||++++.
T Consensus 327 ~~aGf~~~~~ 336 (352)
T 3mcz_A 327 RDAGLAVGER 336 (352)
T ss_dssp HHTTCEEEEE
T ss_pred HHCCCceeee
Confidence 9999999874
No 68
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.83 E-value=2.8e-20 Score=150.98 Aligned_cols=140 Identities=29% Similarity=0.367 Sum_probs=112.0
Q ss_pred CCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccc
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFH 168 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 168 (298)
+.+|||+|||+|.++..++.. +++|+|+.+++.++++ ++.++++|+..+++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999888763 9999999999999876 478999999998888889999999999999
Q ss_pred cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH---hhcccCCCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 169 MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK---KNIHSNFILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 169 ~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
++++ .+++++.++|+|||++++.++....... ..+..... ......+++.+++.++|+++||++++.......
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~ 191 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDRESFLG--REYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFK 191 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHH--HHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHH--HHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccCC
Confidence 9999 9999999999999999998876432110 01111000 012345678999999999999999887765433
No 69
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.83 E-value=2.7e-19 Score=155.95 Aligned_cols=160 Identities=17% Similarity=0.201 Sum_probs=129.2
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDS 156 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 156 (298)
..+++.+.+.++.+|||+|||+|..+..+++.. +.+++++|+ +.+++.+++++...++.++++++.+|+.+ +++. .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-C
Confidence 456677777788999999999999999999874 679999999 99999999999988887789999999976 4443 4
Q ss_pred eeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCC-CCCCCCChhHHHHHHH----hhcccCCCCcchHHHHHH
Q psy2408 157 FDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLP-LLSVSKNDNKFKEYVK----KNIHSNFILVEHYPDLLN 228 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~ 228 (298)
||+|++..++++++++ .+++++.++|+|||++++.+.. ...... ..+..... .......++.++|.++|+
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 327 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSF--NEQFTELDLRMLVFLGGALRTREKWDGLAA 327 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCC--SHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCC--cchhhhccHHHhhhcCCcCCCHHHHHHHHH
Confidence 9999999999999987 8999999999999999999887 443322 11111111 112356678999999999
Q ss_pred hCCCcEEEEEeCCC
Q psy2408 229 KSGFELIKIDDITS 242 (298)
Q Consensus 229 ~~Gf~~~~~~~~~~ 242 (298)
++||++++....+.
T Consensus 328 ~aGf~~~~~~~~~~ 341 (360)
T 1tw3_A 328 SAGLVVEEVRQLPS 341 (360)
T ss_dssp HTTEEEEEEEEEEC
T ss_pred HCCCeEEEEEeCCC
Confidence 99999998877643
No 70
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.83 E-value=2.2e-20 Score=158.10 Aligned_cols=152 Identities=19% Similarity=0.233 Sum_probs=110.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC------------------------------
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGL------------------------------ 136 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~------------------------------ 136 (298)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 67899999999999999999974 57999999999999999988664432
Q ss_pred ---------------------------CCceEEEECCCCCCC-----CCCCCeeEEEecccccccC------hH-HHHHH
Q psy2408 137 ---------------------------LDKVNFLHGDALNLP-----FDNDSFDGGWFFESIFHMN------HS-AALNE 177 (298)
Q Consensus 137 ---------------------------~~~i~~~~~d~~~~~-----~~~~~fD~V~~~~~l~~~~------~~-~~l~~ 177 (298)
+.+++|+++|+...+ +..++||+|++..+++|+. +. .++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 257999999998643 4678999999999998874 34 99999
Q ss_pred HhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHh--CCCcEEEEEeC
Q psy2408 178 ARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNK--SGFELIKIDDI 240 (298)
Q Consensus 178 ~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gf~~~~~~~~ 240 (298)
++++|+|||+|++....+................ .....+.++++..+|.+ +||..++....
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~-~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKN-YYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHH-HHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhh-hhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 9999999999999755432211000000111111 11223447899999998 99988876543
No 71
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.82 E-value=2.6e-19 Score=154.54 Aligned_cols=160 Identities=15% Similarity=0.145 Sum_probs=128.4
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
....+++.+...+ .+|||+|||+|..+..+++.. +.+++++|+ +.+++.+++++...++.++++++.+|+.+ +++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 3456677776666 899999999999999999874 679999999 99999999998877766789999999987 555
Q ss_pred CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH----hhcccCCCCcchHHHHH
Q psy2408 155 DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK----KNIHSNFILVEHYPDLL 227 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l 227 (298)
++||+|++..++++++++ .++++++++|+|||++++.+........ .. ...... .......++.++|.+++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~t~~e~~~ll 309 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP-SP-MSVLWDVHLFMACAGRHRTTEEVVDLL 309 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC-CH-HHHHHHHHHHHHHSCCCCBHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC-cc-hhHHhhhHhHhhCCCcCCCHHHHHHHH
Confidence 689999999999999876 9999999999999999999887554322 11 111111 11234556899999999
Q ss_pred HhCCCcEEEEEeCC
Q psy2408 228 NKSGFELIKIDDIT 241 (298)
Q Consensus 228 ~~~Gf~~~~~~~~~ 241 (298)
+++||++++....+
T Consensus 310 ~~aGf~~~~~~~~~ 323 (334)
T 2ip2_A 310 GRGGFAVERIVDLP 323 (334)
T ss_dssp HHTTEEEEEEEEET
T ss_pred HHCCCceeEEEECC
Confidence 99999999887654
No 72
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.82 E-value=1.5e-20 Score=156.82 Aligned_cols=149 Identities=19% Similarity=0.097 Sum_probs=110.2
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCC---------------------------
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGL--------------------------- 136 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~--------------------------- 136 (298)
+..++.+|||||||+|..+..++. .++ +|+|+|+|+.|++.|++.+.....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~-~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAAC-DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHH-hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 446788999999999988776665 454 799999999999999987654310
Q ss_pred -CCceE-EEECCCCCC-CC---CCCCeeEEEeccccccc----ChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHH
Q psy2408 137 -LDKVN-FLHGDALNL-PF---DNDSFDGGWFFESIFHM----NHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKF 205 (298)
Q Consensus 137 -~~~i~-~~~~d~~~~-~~---~~~~fD~V~~~~~l~~~----~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 205 (298)
..++. ++++|+.+. |+ ..++||+|+++.+++|+ ++. .++++++++|||||+|++..........
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~----- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM----- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE-----
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce-----
Confidence 01233 889999874 43 25789999999999986 334 9999999999999999998754221100
Q ss_pred HHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 206 KEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
..........++.+++.++|+++||++++.....
T Consensus 206 --~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 --VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp --ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred --eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 0000112335688999999999999999887764
No 73
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.82 E-value=7.8e-20 Score=155.04 Aligned_cols=154 Identities=14% Similarity=0.116 Sum_probs=109.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCC-----ceEEEECCCC------CC--CCCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLD-----KVNFLHGDAL------NL--PFDN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~-----~i~~~~~d~~------~~--~~~~ 154 (298)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|++++...+... ++++.+.|+. ++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 578999999999987666666445799999999999999999987655321 2678888872 22 3456
Q ss_pred CCeeEEEeccccccc---ChH-HHHHHHhhcccCCcEEEEEeCCCCCCCC----------Ch----hHHH--------H-
Q psy2408 155 DSFDGGWFFESIFHM---NHS-AALNEARRVLKSGSILTLTDLPLLSVSK----------ND----NKFK--------E- 207 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~---~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~----------~~----~~~~--------~- 207 (298)
++||+|+|..+++++ .+. .++++++++|||||++++..++...... .. ..+. .
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 899999999999875 344 9999999999999999998765211000 00 0000 0
Q ss_pred --HHHh----hcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 208 --YVKK----NIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 208 --~~~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
+... .....+.+.+++.++++++||+++....+.
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 0000 011135667889999999999999886544
No 74
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.82 E-value=1.4e-19 Score=144.95 Aligned_cols=148 Identities=15% Similarity=0.196 Sum_probs=115.8
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCee
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFD 158 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 158 (298)
.++..+ +++ +|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++...+. ++.++++|+.++++++++||
T Consensus 23 ~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD 96 (202)
T 2kw5_A 23 SVANQI--PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWE 96 (202)
T ss_dssp HHHHHS--CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCS
T ss_pred HHHHhC--CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCcc
Confidence 344444 466 9999999999999999984 78999999999999999999887765 69999999999888788999
Q ss_pred EEEecccccccC--hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 159 GGWFFESIFHMN--HS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 159 ~V~~~~~l~~~~--~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
+|++.. .|+. +. .+++++.++|+|||++++.++....... ..........+++.+++.++++ ||+++
T Consensus 97 ~v~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 97 GIVSIF--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY------NTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp EEEEEC--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG------TSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred EEEEEh--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC------CCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 999854 4444 44 9999999999999999999876433210 0000112245788999999998 99999
Q ss_pred EEEeCCC
Q psy2408 236 KIDDITS 242 (298)
Q Consensus 236 ~~~~~~~ 242 (298)
.......
T Consensus 167 ~~~~~~~ 173 (202)
T 2kw5_A 167 IANNLER 173 (202)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8776543
No 75
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.82 E-value=6e-20 Score=152.84 Aligned_cols=159 Identities=18% Similarity=0.147 Sum_probs=120.8
Q ss_pred CCCCchhhHHhhhcCCcccccccccCCceeEee--ccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHH-
Q psy2408 27 KGNKGKKTVATLYDSPEGQIGSVLFGGHMHWGY--WDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSG- 103 (298)
Q Consensus 27 ~~~~~~~~~~~~yd~~~~~~y~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~- 103 (298)
........++++|+.. ..+|+..++..++.+. |.....-+.+. ...++.+.-...+.+.++.+|||||||+|.++
T Consensus 61 ~~~~l~~~~~~~y~~~-~~~~E~~wa~~l~~~~~p~~~l~~fpy~~-~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta 138 (298)
T 3fpf_A 61 EMNHALSLIRKFYVNL-GMKLEMEKAQEVIESDSPWETLRSFYFYP-RYLELLKNEAALGRFRRGERAVFIGGGPLPLTG 138 (298)
T ss_dssp GGHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCSSHHHHHHTSTTHH-HHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHH
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCChHHhhccCCCcc-cHHHHHHHHHHHcCCCCcCEEEEECCCccHHHH
Confidence 3344456788999998 8888887766553220 11000111222 24445555556788899999999999998765
Q ss_pred HHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcc
Q psy2408 104 IRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVL 182 (298)
Q Consensus 104 ~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~L 182 (298)
..+++..+++|+|+|+|+++++.|++++...++ ++++++++|+.+++ +++||+|++... .+++ .+++++.++|
T Consensus 139 ~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~L 212 (298)
T 3fpf_A 139 ILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYV 212 (298)
T ss_dssp HHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHC
T ss_pred HHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHc
Confidence 445554689999999999999999999999888 78999999998875 689999998654 5777 9999999999
Q ss_pred cCCcEEEEEeC
Q psy2408 183 KSGSILTLTDL 193 (298)
Q Consensus 183 kpgG~l~i~~~ 193 (298)
||||++++.+.
T Consensus 213 kPGG~Lvv~~~ 223 (298)
T 3fpf_A 213 DTETRIIYRTY 223 (298)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCcEEEEEcC
Confidence 99999999764
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.81 E-value=1.4e-21 Score=173.73 Aligned_cols=164 Identities=15% Similarity=0.207 Sum_probs=126.3
Q ss_pred CcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceE-EEEC
Q psy2408 67 DNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVN-FLHG 145 (298)
Q Consensus 67 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~-~~~~ 145 (298)
..+.....+..+.+++.+.+.++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.|+++ +++.... +...
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~ 160 (416)
T 4e2x_A 86 SVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHH-TTCEEEEECCCHHHHHHHHTT----TCCEECSCCSHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHH-cCCcEEEECCCHHHHHHHHHc----CCCcceeeechh
Confidence 356667788889999999888899999999999999999998 577999999999999999866 3221111 1123
Q ss_pred CCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHH-HHHh--hcccCCCCcc
Q psy2408 146 DALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKE-YVKK--NIHSNFILVE 221 (298)
Q Consensus 146 d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 221 (298)
+...+++++++||+|++.++++|++++ .++++++++|+|||++++..+.... .... .+.. ..+..+++.+
T Consensus 161 ~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~~~~~~~~~~~~~~~~~~s~~ 234 (416)
T 4e2x_A 161 TADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------IVAKTSFDQIFDEHFFLFSAT 234 (416)
T ss_dssp HHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------HHHHTCGGGCSTTCCEECCHH
T ss_pred hHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------hhhhcchhhhhhhhhhcCCHH
Confidence 333345557899999999999999999 9999999999999999997655211 0000 0011 1234567889
Q ss_pred hHHHHHHhCCCcEEEEEeCC
Q psy2408 222 HYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 222 ~~~~~l~~~Gf~~~~~~~~~ 241 (298)
++..+++++||++++...++
T Consensus 235 ~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 235 SVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHcCCEEEEEEEcc
Confidence 99999999999999988765
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.81 E-value=2.8e-19 Score=151.48 Aligned_cols=117 Identities=21% Similarity=0.300 Sum_probs=97.8
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC---CceEEEECCCCCCC--
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLL---DKVNFLHGDALNLP-- 151 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~---~~i~~~~~d~~~~~-- 151 (298)
.+.+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+.. .++.+..+|+..++
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 46 KAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 344444444457789999999999999999984 779999999999999999886443321 35788999998876
Q ss_pred -CCCCCeeEEEec-ccccccCh-------H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 -FDNDSFDGGWFF-ESIFHMNH-------S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 -~~~~~fD~V~~~-~~l~~~~~-------~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|++. .+++|+++ . .+++++.++|+|||++++..++
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 678999999998 89999999 6 9999999999999999998654
No 78
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.81 E-value=3.4e-19 Score=154.58 Aligned_cols=157 Identities=13% Similarity=0.090 Sum_probs=120.5
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
...+++.+.+.++.+|||||||+|..+..+++.. +.+++++|++ .++. +++....++.++++++.+|+. .++|
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p-- 246 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-REVP-- 246 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-CCCC--
Confidence 4567778888888999999999999999999874 5689999994 4444 333333455568999999997 3445
Q ss_pred CeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChh-HH-HHHHHhhcccCCCCcchHHHHHHhC
Q psy2408 156 SFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDN-KF-KEYVKKNIHSNFILVEHYPDLLNKS 230 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (298)
+||+|++..++++++++ .+|++++++|+|||++++.+........... .. ............++.++|.++|+++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 89999999999999988 9999999999999999999886655432111 11 1111112344567899999999999
Q ss_pred CCcEEEEEe
Q psy2408 231 GFELIKIDD 239 (298)
Q Consensus 231 Gf~~~~~~~ 239 (298)
||+++++..
T Consensus 327 Gf~~~~~~~ 335 (348)
T 3lst_A 327 GLRLDRVVG 335 (348)
T ss_dssp TEEEEEEEE
T ss_pred CCceEEEEE
Confidence 999998876
No 79
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.81 E-value=9.7e-20 Score=146.53 Aligned_cols=150 Identities=23% Similarity=0.354 Sum_probs=114.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.++.+|||+|||+|..+..++...+.+|+|+|+|+.+++.+++++...+ .++.++++|+.++++++++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChH
Confidence 5678999999999998544444468899999999999999999988765 36899999999988888899999999999
Q ss_pred cccC--hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh-hHH-HHHH-----HhhcccCCCCcchHHHHHHhCCCcEEE
Q psy2408 167 FHMN--HS-AALNEARRVLKSGSILTLTDLPLLSVSKND-NKF-KEYV-----KKNIHSNFILVEHYPDLLNKSGFELIK 236 (298)
Q Consensus 167 ~~~~--~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~-~~~~-----~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 236 (298)
+|++ +. .+++++.++|+|||++++.++......... ... ...+ .......+++.+++..++..+||...+
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 9994 44 999999999999999999887654321100 000 0000 001123567888999999999987665
Q ss_pred EE
Q psy2408 237 ID 238 (298)
Q Consensus 237 ~~ 238 (298)
..
T Consensus 180 ~~ 181 (209)
T 2p8j_A 180 DR 181 (209)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 80
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.81 E-value=4.2e-19 Score=149.88 Aligned_cols=139 Identities=12% Similarity=0.122 Sum_probs=114.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++++++|+.++++ +++||+|++..++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccch
Confidence 47789999999999999999995 78999999999999999999998876 69999999998876 6899999999999
Q ss_pred cccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 167 FHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 167 ~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
+|++++ .+++++.++|+|||.+++........... .......++.+++.+++.. |+++...+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC---------PLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---------SSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC---------CCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 999765 99999999999999988766554433220 1122346778888888864 988877643
No 81
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.81 E-value=1.8e-20 Score=153.66 Aligned_cols=145 Identities=19% Similarity=0.221 Sum_probs=107.8
Q ss_pred hhhHHhhhcCCcccccccccC-----CceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHH
Q psy2408 32 KKTVATLYDSPEGQIGSVLFG-----GHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRL 106 (298)
Q Consensus 32 ~~~~~~~yd~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l 106 (298)
.++.+..|+.. +..|+..-. +..-...|.. .+.+.+.+.+ ..+|.+|||||||+|..+..+
T Consensus 13 ~e~~~~~w~~~-~~~yd~~~~~l~~~g~~vm~~we~------------~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~ 78 (236)
T 3orh_A 13 GENCSPAWGAA-PAAYDAADTHLRILGKPVMERWET------------PYMHALAAAA-SSKGGRVLEVGFGMAIAASKV 78 (236)
T ss_dssp TCBCHHHHTTS-CEEECTTSSEEEETTEEEEEGGGH------------HHHHHHHHHH-TTTCEEEEEECCTTSHHHHHH
T ss_pred CchhhhhHhcC-cCCCCcchhhhhhcCHHHHHHHHH------------HHHHHHHHhh-ccCCCeEEEECCCccHHHHHH
Confidence 34567888887 777765311 1111123432 2223333333 257889999999999999999
Q ss_pred HHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCCCCeeEEEe-----cccccccChH-HHHHHH
Q psy2408 107 AKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDNDSFDGGWF-----FESIFHMNHS-AALNEA 178 (298)
Q Consensus 107 ~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~-----~~~l~~~~~~-~~l~~~ 178 (298)
++..+.++++||+|+.+++.|++++...+ .++.++.+|+..+ ++++++||.|++ ...++|..++ .+++++
T Consensus 79 ~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~ 156 (236)
T 3orh_A 79 QEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHA 156 (236)
T ss_dssp TTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTH
T ss_pred HHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhh
Confidence 88656799999999999999999988765 4688899987654 567889999974 5667788888 999999
Q ss_pred hhcccCCcEEEEEe
Q psy2408 179 RRVLKSGSILTLTD 192 (298)
Q Consensus 179 ~r~LkpgG~l~i~~ 192 (298)
.|+|||||+|++.+
T Consensus 157 ~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 157 FRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHEEEEEEEEECC
T ss_pred hheeCCCCEEEEEe
Confidence 99999999998854
No 82
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.80 E-value=3.7e-18 Score=148.11 Aligned_cols=161 Identities=15% Similarity=0.164 Sum_probs=127.0
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
....+++.+.+.+..+|||||||+|..+..+++.. +.+++.+|. +.+++.+++.+...+ .++++++.+|+.+.|.+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCC-
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCC-
Confidence 34566777777788899999999999999999984 678999997 889999998876544 57899999999876543
Q ss_pred CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH----hhcccCCCCcchHHHHH
Q psy2408 155 DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK----KNIHSNFILVEHYPDLL 227 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l 227 (298)
.+|+|++..++|+++++ .+|+++++.|+|||+++|.+.........+. ...... ......-++.++|.++|
T Consensus 244 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~-~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 244 -EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPL-LTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp -CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH-HHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred -CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH-HHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 58999999999999987 8899999999999999999987655433122 111111 12234567899999999
Q ss_pred HhCCCcEEEEEeCC
Q psy2408 228 NKSGFELIKIDDIT 241 (298)
Q Consensus 228 ~~~Gf~~~~~~~~~ 241 (298)
+++||+.+++...+
T Consensus 322 ~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 322 SSAGFRDFQFKKTG 335 (353)
T ss_dssp HHHTCEEEEEECCS
T ss_pred HHCCCceEEEEEcC
Confidence 99999999987654
No 83
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.80 E-value=2.3e-18 Score=150.29 Aligned_cols=156 Identities=12% Similarity=0.107 Sum_probs=120.9
Q ss_pred HHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 77 SRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 77 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...+++.+. +.++.+|||||||+|..+..+++.. +.+++++|+ +.+++.+++. ++++++.+|+.+ ++|.
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCC
Confidence 455666665 6677899999999999999999874 679999999 8888776532 479999999987 6664
Q ss_pred CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhH--HH---HHHHh--hcccCCCCcchHH
Q psy2408 155 DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNK--FK---EYVKK--NIHSNFILVEHYP 224 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~---~~~~~--~~~~~~~~~~~~~ 224 (298)
+ |+|++..++|++++. .+|++++++|+|||++++.+............ .. .+... ......++.++|.
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~ 339 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQ 339 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHH
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHH
Confidence 4 999999999999987 89999999999999999999876554331111 11 11111 1245567899999
Q ss_pred HHHHhCCCcEEEEEeCCCC
Q psy2408 225 DLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 225 ~~l~~~Gf~~~~~~~~~~~ 243 (298)
++|+++||+++++......
T Consensus 340 ~ll~~AGF~~v~~~~~~~~ 358 (368)
T 3reo_A 340 ALAMASGFRGFKVASCAFN 358 (368)
T ss_dssp HHHHHTTCCEEEEEEEETT
T ss_pred HHHHHCCCeeeEEEEeCCC
Confidence 9999999999988776543
No 84
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=5.2e-19 Score=145.90 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=115.3
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC-----CCeeEE
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN-----DSFDGG 160 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~fD~V 160 (298)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. ..+++++++|+.+++.+. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 467889999999999999999985 4599999999999999998862 236999999998864321 249999
Q ss_pred EecccccccC--hH-HHHHHHhhcccCCcEEEEEeCCCCCCCC----------ChhHHHHHHHhhcccCCCCcchHHHHH
Q psy2408 161 WFFESIFHMN--HS-AALNEARRVLKSGSILTLTDLPLLSVSK----------NDNKFKEYVKKNIHSNFILVEHYPDLL 227 (298)
Q Consensus 161 ~~~~~l~~~~--~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (298)
++..+++|++ +. .+++++.++|+|||++++.++....... .+............+..++.+++.+++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 9999999999 66 9999999999999999998876432100 001111112222233456889999998
Q ss_pred HhCCCcEEEEEeCCCC
Q psy2408 228 NKSGFELIKIDDITSH 243 (298)
Q Consensus 228 ~~~Gf~~~~~~~~~~~ 243 (298)
+||+++....++..
T Consensus 209 --aGf~~~~~~~~~~~ 222 (245)
T 3ggd_A 209 --PDFEILSQGEGLFQ 222 (245)
T ss_dssp --TTEEEEEEECCBCC
T ss_pred --CCCEEEeccccccc
Confidence 99999988776544
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.80 E-value=4.3e-18 Score=136.45 Aligned_cols=138 Identities=15% Similarity=0.127 Sum_probs=113.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
..+...++..+.+.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...++ ++++++++|+.+...
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD 104 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh
Confidence 4555677888888899999999999999999999864 47999999999999999999998887 579999999976533
Q ss_pred CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 153 DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
..++||+|++..++. +. .+++++.++|+|||++++...... +.+++...++++|
T Consensus 105 ~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------~~~~~~~~l~~~g 159 (204)
T 3e05_A 105 DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD----------------------TLTKAVEFLEDHG 159 (204)
T ss_dssp TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH----------------------HHHHHHHHHHHTT
T ss_pred cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc----------------------cHHHHHHHHHHCC
Confidence 347899999987765 56 999999999999999999765411 2346778899999
Q ss_pred CcEEEEE
Q psy2408 232 FELIKID 238 (298)
Q Consensus 232 f~~~~~~ 238 (298)
| .++..
T Consensus 160 ~-~~~~~ 165 (204)
T 3e05_A 160 Y-MVEVA 165 (204)
T ss_dssp C-EEEEE
T ss_pred C-ceeEE
Confidence 9 44433
No 86
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.79 E-value=2.8e-18 Score=149.52 Aligned_cols=157 Identities=13% Similarity=0.121 Sum_probs=121.3
Q ss_pred HHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 76 LSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 76 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
....+++.+. ..+..+|||||||+|..+..+++.. +.+++++|+ +.+++.+++. ++++++.+|+.+ ++|
T Consensus 188 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 188 ITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCC
Confidence 3455666665 6778899999999999999999874 679999999 8888776532 479999999988 776
Q ss_pred CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHH-----HHHHHh--hcccCCCCcchH
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKF-----KEYVKK--NIHSNFILVEHY 223 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~ 223 (298)
.+ |+|++..+++++++. .+|++++++|+|||++++.+............. ..+... ......++.++|
T Consensus 259 ~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~ 336 (364)
T 3p9c_A 259 SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREF 336 (364)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHH
T ss_pred CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHH
Confidence 54 999999999999876 899999999999999999998765533211111 111111 123456788999
Q ss_pred HHHHHhCCCcEEEEEeCCCC
Q psy2408 224 PDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~~~ 243 (298)
.++|+++||+++++......
T Consensus 337 ~~ll~~AGF~~v~~~~~~~~ 356 (364)
T 3p9c_A 337 QALARGAGFTGVKSTYIYAN 356 (364)
T ss_dssp HHHHHHTTCCEEEEEEEETT
T ss_pred HHHHHHCCCceEEEEEcCCc
Confidence 99999999999998776543
No 87
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=1.7e-18 Score=137.47 Aligned_cols=127 Identities=19% Similarity=0.217 Sum_probs=108.7
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEec-c
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFF-E 164 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~-~ 164 (298)
++++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++++ .++.+++.|+.++++++++||+|++. .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 467889999999999999999985 789999999999999999875 24889999999888777899999998 7
Q ss_pred cccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 165 SIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 165 ~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
+++|+..+ .+++++.++|+|||.+++...... .++.+++..+++++||.++....
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------------------~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------------------GWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------------------SCCHHHHHHHHHHHTEEEEEEES
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------------------CcCHHHHHHHHHHcCCEEeeeec
Confidence 88888654 999999999999999999754421 14567899999999999887654
No 88
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.79 E-value=2.9e-18 Score=137.38 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=113.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+...++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++...+++++++++++|+.+....
T Consensus 41 ~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 41 SPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 344556777778889999999999999999999996 8899999999999999999999988876899999999884223
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCc
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
.++||+|++...+ .. .+++++.++|+|||++++..... . +..++...+++.|++
T Consensus 120 ~~~~D~v~~~~~~---~~-~~l~~~~~~LkpgG~lv~~~~~~-------~---------------~~~~~~~~l~~~g~~ 173 (204)
T 3njr_A 120 LPLPEAVFIGGGG---SQ-ALYDRLWEWLAPGTRIVANAVTL-------E---------------SETLLTQLHARHGGQ 173 (204)
T ss_dssp SCCCSEEEECSCC---CH-HHHHHHHHHSCTTCEEEEEECSH-------H---------------HHHHHHHHHHHHCSE
T ss_pred CCCCCEEEECCcc---cH-HHHHHHHHhcCCCcEEEEEecCc-------c---------------cHHHHHHHHHhCCCc
Confidence 3579999987644 23 49999999999999999976551 1 124666788888988
Q ss_pred EEEEEe
Q psy2408 234 LIKIDD 239 (298)
Q Consensus 234 ~~~~~~ 239 (298)
+..+..
T Consensus 174 i~~i~~ 179 (204)
T 3njr_A 174 LLRIDI 179 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777553
No 89
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.79 E-value=5.8e-19 Score=142.76 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=99.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
+....+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++... .+++++++|+.+++ ++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CC
Confidence 44455555666677889999999999999999985 579999999999999999987653 37999999999987 67
Q ss_pred CCeeEEEecccccccChH----HHHHHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHMNHS----AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~----~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++||+|++..+++|++++ .+++++.++|+|||.+++.++.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 899999999999999975 6799999999999999997654
No 90
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.79 E-value=3e-19 Score=148.92 Aligned_cols=150 Identities=18% Similarity=0.121 Sum_probs=114.4
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCC---------------------------
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGL--------------------------- 136 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~--------------------------- 136 (298)
...++.+|||+|||+|.++..++.. +. +|+|+|+|+.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4457789999999999999888874 44 999999999999999988764321
Q ss_pred -CCce-EEEECCCCCCC-CCC---CCeeEEEeccccc----ccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHH
Q psy2408 137 -LDKV-NFLHGDALNLP-FDN---DSFDGGWFFESIF----HMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKF 205 (298)
Q Consensus 137 -~~~i-~~~~~d~~~~~-~~~---~~fD~V~~~~~l~----~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 205 (298)
..++ .++++|+.+.+ +++ ++||+|++..+++ +++++ .+++++.++|+|||++++.+........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~----- 206 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYM----- 206 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE-----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEE-----
Confidence 0127 89999998863 345 7999999999999 55566 9999999999999999998754221100
Q ss_pred HHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 206 KEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
..........++.+++.++|+++||+++.......
T Consensus 207 --~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 241 (265)
T 2i62_A 207 --IGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 241 (265)
T ss_dssp --ETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECC
T ss_pred --cCCccccccccCHHHHHHHHHHCCCEEEEEEEecc
Confidence 00111123456778999999999999999887653
No 91
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.79 E-value=2.2e-18 Score=135.91 Aligned_cols=150 Identities=13% Similarity=0.118 Sum_probs=106.6
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDN 154 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~ 154 (298)
+...++.. .+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...++ .++++++.+...++ +++
T Consensus 11 ~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~ 87 (185)
T 3mti_A 11 MSHDFLAE-VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVR 87 (185)
T ss_dssp HHHHHHHT-TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCC
T ss_pred HHHHHHHH-hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhcc
Confidence 33444433 3468899999999999999999996 88999999999999999999998887 67999998877752 446
Q ss_pred CCeeEEEecc-cccc-------c-ChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHH
Q psy2408 155 DSFDGGWFFE-SIFH-------M-NHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYP 224 (298)
Q Consensus 155 ~~fD~V~~~~-~l~~-------~-~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
++||+|+++. .+.+ . .+. .+++++.++|||||++++..+....... ..... ..++.
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--~~~~~------------~~~~~ 153 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGD--MEKDA------------VLEYV 153 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------C--HHHHH------------HHHHH
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCH--HHHHH------------HHHHH
Confidence 8899998763 2222 1 222 8899999999999999998765332211 11111 22445
Q ss_pred HHHHhCCCcEEEEEeCCC
Q psy2408 225 DLLNKSGFELIKIDDITS 242 (298)
Q Consensus 225 ~~l~~~Gf~~~~~~~~~~ 242 (298)
..+...+|.+.....+..
T Consensus 154 ~~l~~~~~~~~~~~~~~~ 171 (185)
T 3mti_A 154 IGLDQRVFTAMLYQPLNQ 171 (185)
T ss_dssp HHSCTTTEEEEEEEESSC
T ss_pred HhCCCceEEEEEehhhcc
Confidence 555667888888776653
No 92
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.78 E-value=1e-18 Score=141.24 Aligned_cols=143 Identities=13% Similarity=0.159 Sum_probs=107.3
Q ss_pred HhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC---CCCCCC
Q psy2408 82 NKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL---PFDNDS 156 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~ 156 (298)
+.+.++||.+|||+|||+|.++..+++.. ..+|+++|+|+.|++.+++.+... .|+..+..|.... ++..++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccce
Confidence 45678999999999999999999999974 469999999999999999887654 4788999988663 456688
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
+|+|++. +.+..++ .++.++.++|||||+++++......... .+......+..+.|+++||+++
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~-------------~p~~~~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVT-------------TEPSEVYKREIKTLMDGGLEIK 212 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHH-------------TCCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCC-------------CChHHHHHHHHHHHHHCCCEEE
Confidence 9998853 4445566 9999999999999999997543211000 0000011234567889999999
Q ss_pred EEEeCCC
Q psy2408 236 KIDDITS 242 (298)
Q Consensus 236 ~~~~~~~ 242 (298)
+..++..
T Consensus 213 e~i~L~p 219 (233)
T 4df3_A 213 DVVHLDP 219 (233)
T ss_dssp EEEECTT
T ss_pred EEEccCC
Confidence 8877644
No 93
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.78 E-value=2e-19 Score=147.60 Aligned_cols=107 Identities=23% Similarity=0.253 Sum_probs=88.1
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCCCCeeEEEe-
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDNDSFDGGWF- 162 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~- 162 (298)
+.++.+|||+|||+|..+..+++....+|+|+|+|+.|++.|+++....+ .++.++++|+.++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 35788999999999999999977434489999999999999999887665 4799999999887 788899999998
Q ss_pred cccc--c--ccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 163 FESI--F--HMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 163 ~~~l--~--~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
...+ . +..+. .++++++++|||||++++.+..
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4443 1 22223 7799999999999999987543
No 94
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.78 E-value=3.1e-18 Score=143.30 Aligned_cols=159 Identities=14% Similarity=0.088 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhCC-CCCCCeEEEeCCCC---CHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECC
Q psy2408 72 GSDKLSRIMINKTS-ITKGQRFIDIGCGF---GLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGD 146 (298)
Q Consensus 72 ~~~~~~~~l~~~~~-~~~~~~vLDiGcG~---G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d 146 (298)
........+++.+. ..+..+|||||||+ |.++..+.+. .+.+|+++|+|+.|++.+++++.. ..+++++++|
T Consensus 60 ~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D 136 (274)
T 2qe6_A 60 ENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTAD 136 (274)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECC
T ss_pred HHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEee
Confidence 34455555555553 23457999999999 9887766654 468999999999999999998853 2579999999
Q ss_pred CCCCC-----------CCCCCeeEEEecccccccCh--H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH-h
Q psy2408 147 ALNLP-----------FDNDSFDGGWFFESIFHMNH--S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK-K 211 (298)
Q Consensus 147 ~~~~~-----------~~~~~fD~V~~~~~l~~~~~--~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~ 211 (298)
+.+.+ ++.++||+|++..+++|+++ + .++++++++|+|||+|++.+..... ..........+. .
T Consensus 137 ~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~~~~~~~~~~~~~~ 215 (274)
T 2qe6_A 137 VRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-LPAQQKLARITREN 215 (274)
T ss_dssp TTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-CHHHHHHHHHHHHH
T ss_pred CCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-hHHHHHHHHHHHhc
Confidence 97631 23358999999999999998 5 9999999999999999999877532 110011111111 1
Q ss_pred hcccCCCCcchHHHHHHhCCCcEEE
Q psy2408 212 NIHSNFILVEHYPDLLNKSGFELIK 236 (298)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~Gf~~~~ 236 (298)
.....+++.+++.++| .||++++
T Consensus 216 ~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 216 LGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HSCCCCBCHHHHHHTT--TTCEECT
T ss_pred CCCCccCCHHHHHHHh--CCCeEcc
Confidence 2234567899999998 5997665
No 95
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.78 E-value=3.1e-18 Score=134.12 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-C
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-L 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~ 150 (298)
...+...+++.+.+.++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.+++++...+++.++ +++.|..+ +
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 35566777788888889999999999999999999864 679999999999999999999988887678 88888855 3
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKS 230 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (298)
+...++||+|++..++++ ..+++++.++|+|||++++...... +...+...+++.
T Consensus 89 ~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~ 143 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVANAVTVE----------------------SEQMLWALRKQF 143 (178)
T ss_dssp GGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEEECSHH----------------------HHHHHHHHHHHH
T ss_pred hccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEEeeccc----------------------cHHHHHHHHHHc
Confidence 322378999999988876 5789999999999999999876511 123455677777
Q ss_pred CCcEEEEE
Q psy2408 231 GFELIKID 238 (298)
Q Consensus 231 Gf~~~~~~ 238 (298)
|+.+....
T Consensus 144 ~~~~~~~~ 151 (178)
T 3hm2_A 144 GGTISSFA 151 (178)
T ss_dssp CCEEEEEE
T ss_pred CCeeEEEE
Confidence 77766543
No 96
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.78 E-value=2.3e-19 Score=145.45 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=108.4
Q ss_pred HHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHH----HhcCCCCceEEEECCCCCCCCCCC
Q psy2408 81 INKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTA----KAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~----~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
+..+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++.+.+.+ ...++ +++.++++|+.+++++++
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSG 98 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCC
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCC
Confidence 344446788899999999999999999964 689999999999888643333 23444 379999999999988766
Q ss_pred CeeEEEe---cccc--cccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHh
Q psy2408 156 SFDGGWF---FESI--FHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNK 229 (298)
Q Consensus 156 ~fD~V~~---~~~l--~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (298)
+ |.|++ ...+ +|++++ .+++++.++|||||++++.......... ... ..........+..+.+..++++
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~l~~~l~~ 173 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPS-VPE---VGEHPEPTPDSADEWLAPRYAE 173 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTB-CGG---GTTCCCCCHHHHHHHHHHHHHH
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccc-ccc---cccCCccchHHHHHHHHHHHHH
Confidence 5 66653 2333 277888 9999999999999999995422111100 000 0000000001113447789999
Q ss_pred CCCcEEEEEeCCCCcc
Q psy2408 230 SGFELIKIDDITSHVM 245 (298)
Q Consensus 230 ~Gf~~~~~~~~~~~~~ 245 (298)
+||++.+...+.....
T Consensus 174 aGf~i~~~~~~~~~~~ 189 (218)
T 3mq2_A 174 AGWKLADCRYLEPEEV 189 (218)
T ss_dssp TTEEEEEEEEECHHHH
T ss_pred cCCCceeeeccchhhh
Confidence 9999999887655443
No 97
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.77 E-value=3.2e-18 Score=149.73 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=118.7
Q ss_pred HHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 77 SRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 77 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...+++.+. +.++.+|||||||+|..+..+++.. +.+++++|+ +.+++.+++. .+++++.+|+.+ +++.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCCC
Confidence 456677765 6678899999999999999999874 678999999 8898877641 359999999987 6654
Q ss_pred CCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChh-H-HHHHHHh----hcccCCCCcchHHH
Q psy2408 155 DSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDN-K-FKEYVKK----NIHSNFILVEHYPD 225 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~-~~~~~~~----~~~~~~~~~~~~~~ 225 (298)
||+|++..+++|++++ .+|++++++|+|||++++.+........... . ....... ......++.++|.+
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ 345 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEK 345 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHH
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHH
Confidence 9999999999999987 9999999999999999999876544322110 0 1111111 12345678999999
Q ss_pred HHHhCCCcEEEEEeC
Q psy2408 226 LLNKSGFELIKIDDI 240 (298)
Q Consensus 226 ~l~~~Gf~~~~~~~~ 240 (298)
+|+++||++++....
T Consensus 346 ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 346 LSKLSGFSKFQVACR 360 (372)
T ss_dssp HHHHTTCSEEEEEEE
T ss_pred HHHHCCCceEEEEEc
Confidence 999999999988764
No 98
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.77 E-value=1.1e-17 Score=154.43 Aligned_cols=120 Identities=17% Similarity=0.205 Sum_probs=101.1
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhc------CCCCceEEEEC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG--CRVDGITISKFQQESAMKTAKAE------GLLDKVNFLHG 145 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~l~~a~~~~~~~------~~~~~i~~~~~ 145 (298)
....+.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... ++ .+++++++
T Consensus 707 eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqG 785 (950)
T 3htx_A 707 KQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEES
T ss_pred HHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEEC
Confidence 34445555555555788999999999999999998542 79999999999999999876532 33 37999999
Q ss_pred CCCCCCCCCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 146 DALNLPFDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 146 d~~~~~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
|+.++++++++||+|++..+++|++++ .+++++.++|+|| .+++.+++.
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred chHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 999998888999999999999999987 5999999999999 888887663
No 99
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.77 E-value=3.4e-18 Score=137.16 Aligned_cols=138 Identities=15% Similarity=0.098 Sum_probs=110.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+... +.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|++++...++.. ++++++|+.+.+
T Consensus 48 ~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-- 122 (205)
T 3grz_A 48 QLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-- 122 (205)
T ss_dssp HHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--
T ss_pred HHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--
Confidence 3344444333 35788999999999999999888434599999999999999999999888764 999999997753
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCc
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
+++||+|++..+++++ ..+++++.++|+|||++++.++... +.+++..+++++||+
T Consensus 123 ~~~fD~i~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~Gf~ 178 (205)
T 3grz_A 123 DGKFDLIVANILAEIL--LDLIPQLDSHLNEDGQVIFSGIDYL----------------------QLPKIEQALAENSFQ 178 (205)
T ss_dssp CSCEEEEEEESCHHHH--HHHGGGSGGGEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTEE
T ss_pred CCCceEEEECCcHHHH--HHHHHHHHHhcCCCCEEEEEecCcc----------------------cHHHHHHHHHHcCCc
Confidence 5899999998776542 2889999999999999999765421 245788899999999
Q ss_pred EEEEEeC
Q psy2408 234 LIKIDDI 240 (298)
Q Consensus 234 ~~~~~~~ 240 (298)
++.....
T Consensus 179 ~~~~~~~ 185 (205)
T 3grz_A 179 IDLKMRA 185 (205)
T ss_dssp EEEEEEE
T ss_pred eEEeecc
Confidence 9886654
No 100
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.76 E-value=2.6e-19 Score=145.57 Aligned_cols=156 Identities=19% Similarity=0.221 Sum_probs=103.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCC-HHHHHHH---HHHHHhcCCCCceEEEECCCCCCCCC-CCCeeEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITIS-KFQQESA---MKTAKAEGLLDKVNFLHGDALNLPFD-NDSFDGG 160 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s-~~~l~~a---~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~V 160 (298)
.++.+|||||||+|..+..+++. .+.+|+|+|+| +.|++.| ++++...+++ ++.++++|+..+|.. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 57789999999999999999964 57799999999 7777666 7777676764 699999999988531 1445555
Q ss_pred Eecccccc-----cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHH-hhcccCCCCcchHHHHHHhCCCc
Q psy2408 161 WFFESIFH-----MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVK-KNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 161 ~~~~~l~~-----~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
+++....+ ..+. .++++++|+|||||++++.......... ... .... ......+...+++..+++++||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~el~~~l~~aGf~ 178 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEE--AEI-KKRGLPLLSKAYFLSEQYKAELSNSGFR 178 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------CCHHHHHSHHHHHHHHHHTCE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchh--chh-hhcCCCCCChhhcchHHHHHHHHHcCCC
Confidence 54332111 1122 7899999999999999994332221100 000 0000 00011112223589999999999
Q ss_pred EEEEEeCCCCccc
Q psy2408 234 LIKIDDITSHVMP 246 (298)
Q Consensus 234 ~~~~~~~~~~~~~ 246 (298)
+.....++..+..
T Consensus 179 v~~~~~~~~~~~~ 191 (225)
T 3p2e_A 179 IDDVKELDNEYVK 191 (225)
T ss_dssp EEEEEEECHHHHT
T ss_pred eeeeeecCHHHHH
Confidence 9999888766554
No 101
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.76 E-value=8.9e-19 Score=137.12 Aligned_cols=158 Identities=18% Similarity=0.095 Sum_probs=114.7
Q ss_pred HhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC---CCCCee
Q psy2408 82 NKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF---DNDSFD 158 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~fD 158 (298)
..+++.+|.+|||+|||. +++|+|+.|++.|+++.. .+++++++|+.++++ ++++||
T Consensus 6 ~~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 6 ADFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred hccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEe
Confidence 345678999999999996 139999999999998853 248999999998876 788999
Q ss_pred EEEeccccccc-ChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEE
Q psy2408 159 GGWFFESIFHM-NHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIK 236 (298)
Q Consensus 159 ~V~~~~~l~~~-~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 236 (298)
+|++..+++|+ ++. .++++++|+|||||++++..+....... .....+.+++.++|+++|| +.
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~aGf-i~- 130 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN-------------NSKVKTASKLCSALTLSGL-VE- 130 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS-------------SSSSCCHHHHHHHHHHTTC-EE-
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc-------------ccccCCHHHHHHHHHHCCC-cE-
Confidence 99999999999 777 9999999999999999996543211100 1223467899999999999 55
Q ss_pred EEeCCCCcccchHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhccccccEEEEEEEeC
Q psy2408 237 IDDITSHVMPLLVPKLTEATLTYKKEIYKSIPNPEKSIDNWLYLFKYMSKNLGYIIVTAKKI 298 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~k~ 298 (298)
.......... .+..+.|...+......+.+++++|+||
T Consensus 131 ~~~~~~~~~~------------------------~~~~~~~~~~~g~~~~~~~~~~~~a~Kp 168 (176)
T 2ld4_A 131 VKELQREPLT------------------------PEEVQSVREHLGHESDNLLFVQITGKKP 168 (176)
T ss_dssp EEEEEEECCC------------------------HHHHHHHHHHTCCCCSSEEEEEEEEECC
T ss_pred eecCcccCCC------------------------HHHHHHHHHHhcccCCceEEEEEeccCC
Confidence 5543321111 1222234433332234567999999997
No 102
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.76 E-value=9.2e-18 Score=136.72 Aligned_cols=121 Identities=16% Similarity=0.201 Sum_probs=101.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC-CCCCCC-CCCeeEEEecc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA-LNLPFD-NDSFDGGWFFE 164 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~fD~V~~~~ 164 (298)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++. .+++++++|+ ..+|++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARANA------PHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhC------CCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 57889999999999999999995 789999999999999999881 4689999999 567777 7899999987
Q ss_pred cccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCCCC
Q psy2408 165 SIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 165 ~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
.++ .+++++.++|+|||+++. .....+.+++...++++||.++........
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~~-----------------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 170 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFLY-----------------------VGPRLNVPEVPERLAAVGWDIVAEDHVSVL 170 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEEE-----------------------EESSSCCTHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEEE-----------------------eCCcCCHHHHHHHHHHCCCeEEEEEeeeec
Confidence 355 899999999999999981 112345678999999999999887765443
No 103
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.76 E-value=1.9e-17 Score=135.12 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=105.2
Q ss_pred CCCCCCeEEEeCCC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-CCCCCCeeEEEe
Q psy2408 85 SITKGQRFIDIGCG-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-PFDNDSFDGGWF 162 (298)
Q Consensus 85 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~ 162 (298)
.+.++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...++ +++++++|+..+ ++++++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 35688999999999 99999999986578999999999999999999998887 699999997544 455689999998
Q ss_pred cccccccCh-------------------H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcch
Q psy2408 163 FESIFHMNH-------------------S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEH 222 (298)
Q Consensus 163 ~~~l~~~~~-------------------~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (298)
+-.+.+..+ . .+++++.++|+|||++++...... ....+
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------~~~~~ 188 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------KLLNV 188 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------------------HHHHH
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------------------hHHHH
Confidence 866554332 3 889999999999999998643310 11346
Q ss_pred HHHHHHhCCCcEEEEEe
Q psy2408 223 YPDLLNKSGFELIKIDD 239 (298)
Q Consensus 223 ~~~~l~~~Gf~~~~~~~ 239 (298)
+.+.+++.||.+.....
T Consensus 189 ~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 189 IKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHcCCceEEEEe
Confidence 78889999998776654
No 104
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=7.8e-18 Score=139.39 Aligned_cols=141 Identities=21% Similarity=0.416 Sum_probs=107.7
Q ss_pred hhhcCCcccccccccCCceeEeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEE
Q psy2408 37 TLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDG 116 (298)
Q Consensus 37 ~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~ 116 (298)
++|+.. ++.|+..+.... .. ..........++......++.+|||+|||+|..+..+++ .+.+|+|
T Consensus 3 ~~y~~~-a~~yd~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~-~~~~v~g 68 (252)
T 1wzn_A 3 ELYTLL-AEYYDTIYRRRI-----------ER-VKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAE-RGYEVVG 68 (252)
T ss_dssp GGGTTT-GGGHHHHTHHHH-----------HT-HHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHH-TTCEEEE
T ss_pred hHHHHH-HHHHHHHHhcch-----------hh-hHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHH-CCCeEEE
Confidence 467777 777776532100 00 112234455666666666788999999999999999998 4789999
Q ss_pred EeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc-cccccCh--H-HHHHHHhhcccCCcEEEEEe
Q psy2408 117 ITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE-SIFHMNH--S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 117 vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~--~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+|+|+.+++.+++++...++ ++.++++|+.+++++ ++||+|++.. ++.++.. . .+++++.++|+|||.+++..
T Consensus 69 vD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 69 LDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 99999999999999887764 589999999988764 6899999863 4555543 3 99999999999999998865
Q ss_pred CC
Q psy2408 193 LP 194 (298)
Q Consensus 193 ~~ 194 (298)
++
T Consensus 146 ~~ 147 (252)
T 1wzn_A 146 PC 147 (252)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.76 E-value=8.7e-18 Score=143.64 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=90.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC------CCCceEEEECCCCCCC----CC--C
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG------LLDKVNFLHGDALNLP----FD--N 154 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~------~~~~i~~~~~d~~~~~----~~--~ 154 (298)
.++.+|||+|||+|..+..+++..+.+|+++|+|+.+++.++++....+ ...++.++++|+..++ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3678999999999999999988556799999999999999999887542 2246899999998875 53 4
Q ss_pred CCeeEEEeccccccc-C---hH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHM-N---HS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~-~---~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++||+|++..+++++ . +. .+++++.++|+|||.+++..+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999999887 3 34 9999999999999999998765
No 106
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.75 E-value=3.8e-18 Score=147.11 Aligned_cols=172 Identities=15% Similarity=0.127 Sum_probs=122.8
Q ss_pred CcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHH-------HhcCC-C
Q psy2408 67 DNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTA-------KAEGL-L 137 (298)
Q Consensus 67 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~-------~~~~~-~ 137 (298)
..+.+........+++.+.+.++.+|||||||+|.++..++...++ +++|||+|+.+++.|++.. ...++ .
T Consensus 152 ~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~ 231 (438)
T 3uwp_A 152 EVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH 231 (438)
T ss_dssp GGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred cccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4556667788888999999999999999999999999999986666 4999999999999998754 34455 2
Q ss_pred CceEEEECCCCCCCCCC--CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChh-HHHHHHHhhc
Q psy2408 138 DKVNFLHGDALNLPFDN--DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDN-KFKEYVKKNI 213 (298)
Q Consensus 138 ~~i~~~~~d~~~~~~~~--~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~ 213 (298)
.+++++++|+.++++++ ..||+|+++.++ +.++. ..|.++.++|||||+|++.+........... ..........
T Consensus 232 ~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~rnl~di~~il~ 310 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMR 310 (438)
T ss_dssp CEEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCSSSTTSGGGSEE
T ss_pred CCeEEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCcccccChhhhhe
Confidence 57999999999987643 479999987665 34555 8899999999999999998877655332110 0010111111
Q ss_pred ccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 214 HSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 214 ~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
...+-..+...++..+.|...+...+
T Consensus 311 v~el~~~~~sVSWT~~~g~yyi~tvd 336 (438)
T 3uwp_A 311 VVELSPLKGSVSWTGKPVSYYLHTID 336 (438)
T ss_dssp EEECCCCTTCCCTTSSCCCCEEEEEC
T ss_pred eeeccCCCCceeeccCCccEEEEEec
Confidence 11222334445566667766555543
No 107
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.75 E-value=1.1e-17 Score=133.34 Aligned_cols=144 Identities=19% Similarity=0.233 Sum_probs=108.0
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCCCCeeEEE
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDNDSFDGGW 161 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~ 161 (298)
.+.++.+|||+|||+|..+..+++.. ..+|+|+|+|+.+++.|++++...++..+++++++|+.+++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 34678899999999999999999974 36999999999999999999999888678999999998774 4568999999
Q ss_pred ecccccc---------cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 162 FFESIFH---------MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 162 ~~~~l~~---------~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
+...+.. ..+. .+++++.++|+|||++++..+....... ..... ...+...+...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~--~~~~~------------~~~~~~~l~~~~ 164 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGF--EEKEK------------VLEFLKGVDQKK 164 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBS--HHHHH------------HHHHHTTSCTTT
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcH--HHHHH------------HHHHHHhCCCCc
Confidence 8765511 1133 8999999999999999998765332211 11111 112333345567
Q ss_pred CcEEEEEeCCC
Q psy2408 232 FELIKIDDITS 242 (298)
Q Consensus 232 f~~~~~~~~~~ 242 (298)
|.+.....+..
T Consensus 165 ~~v~~~~~~~~ 175 (197)
T 3eey_A 165 FIVQRTDFINQ 175 (197)
T ss_dssp EEEEEEEETTC
T ss_pred EEEEEEEeccC
Confidence 88877766544
No 108
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.75 E-value=1.8e-17 Score=137.76 Aligned_cols=113 Identities=15% Similarity=0.220 Sum_probs=94.1
Q ss_pred HHHhCCCC-CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CCCCC
Q psy2408 80 MINKTSIT-KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FDNDS 156 (298)
Q Consensus 80 l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 156 (298)
+...+.+. ++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.+++.++++|+.+++ ++.++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 44455667 7899999999999999999986555999999999999999999999998888999999998874 45789
Q ss_pred eeEEEeccccccc--------------------ChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 157 FDGGWFFESIFHM--------------------NHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 157 fD~V~~~~~l~~~--------------------~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
||+|+++-.+... .+. .+++.+.++|+|||++++..
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 9999997554332 122 79999999999999999953
No 109
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=6.7e-18 Score=133.69 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=92.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CCCCCeeEEEecc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FDNDSFDGGWFFE 164 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~ 164 (298)
.++.+|||+|||+|.++..++.....+|+++|+|+.+++.+++++...++ ++++++++|+.+++ +++++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46789999999999999988875445899999999999999999998887 57999999998763 3468999999988
Q ss_pred ccccc-ChH-HHHHHHhh--cccCCcEEEEEeCCCC
Q psy2408 165 SIFHM-NHS-AALNEARR--VLKSGSILTLTDLPLL 196 (298)
Q Consensus 165 ~l~~~-~~~-~~l~~~~r--~LkpgG~l~i~~~~~~ 196 (298)
.+++. ++. .++.++.+ +|+|||.+++......
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 87665 444 99999999 9999999999776543
No 110
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.75 E-value=1.3e-17 Score=137.58 Aligned_cols=113 Identities=12% Similarity=-0.051 Sum_probs=89.9
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC--CCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN--LPFD 153 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~ 153 (298)
..+.+++.+.+.++.+|||+|||+|.++..+++ .+++|+++|+|+.|++.|++++.... +.....++.. ....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~-~g~~V~gvD~S~~ml~~Ar~~~~~~~----v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALE-RGASVTVFDFSQRMCDDLAEALADRC----VTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHTSSSC----CEEEECCTTSCCCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHhcc----ceeeeeeccccccccc
Confidence 356678888888999999999999999999998 57899999999999999999875431 2222222221 1112
Q ss_pred CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++||+|++..+++|+... .+++++.++| |||+++++...
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 4789999999999998755 8999999999 99999998654
No 111
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.74 E-value=3.6e-17 Score=129.62 Aligned_cols=118 Identities=19% Similarity=0.285 Sum_probs=102.1
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCC-ceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLD-KVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~ 153 (298)
...+.+++.+...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.+++++...+++. +++++++|+.+. .+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~ 116 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VK 116 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cc
Confidence 45667778888788999999999999999999986 8899999999999999999998887753 499999999874 45
Q ss_pred CCCeeEEEeccccccc-ChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHM-NHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~-~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++||+|++..++++. .+. .+++++.++|+|||.+++....
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 6799999998887763 334 9999999999999999998766
No 112
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.74 E-value=3e-17 Score=134.01 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=107.1
Q ss_pred HHHH---HHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC---
Q psy2408 77 SRIM---INKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN--- 149 (298)
Q Consensus 77 ~~~l---~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~--- 149 (298)
...+ ++.+.+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++... .++.++.+|+..
T Consensus 60 ~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~ 136 (230)
T 1fbn_A 60 AAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQE 136 (230)
T ss_dssp HHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGG
T ss_pred HHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccc
Confidence 3556 5666677889999999999999999998754 79999999999999999886544 579999999988
Q ss_pred -CCCCCCCeeEEEecccccccChH----HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHH
Q psy2408 150 -LPFDNDSFDGGWFFESIFHMNHS----AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYP 224 (298)
Q Consensus 150 -~~~~~~~fD~V~~~~~l~~~~~~----~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
.+++ ++||+|+ ++++++ .+++++.++|+|||++++.......... .. ...+ ..+++.
T Consensus 137 ~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~-~~~~----------~~~~l~ 198 (230)
T 1fbn_A 137 YANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVT-KD-PKEI----------FKEQKE 198 (230)
T ss_dssp GTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSS-SC-HHHH----------HHHHHH
T ss_pred ccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC-CC-HHHh----------hHHHHH
Confidence 6665 7899998 233333 6799999999999999996211111111 00 0111 125676
Q ss_pred HHHHhCCCcEEEEEeCCC
Q psy2408 225 DLLNKSGFELIKIDDITS 242 (298)
Q Consensus 225 ~~l~~~Gf~~~~~~~~~~ 242 (298)
+|+++||.+++..++..
T Consensus 199 -~l~~~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 199 -ILEAGGFKIVDEVDIEP 215 (230)
T ss_dssp -HHHHHTEEEEEEEECTT
T ss_pred -HHHHCCCEEEEEEccCC
Confidence 88999999988877644
No 113
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=139.54 Aligned_cols=159 Identities=20% Similarity=0.297 Sum_probs=115.0
Q ss_pred CchhhHHhhhcCCcccccccccCCcee-EeeccCCCCCCcHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHH
Q psy2408 30 KGKKTVATLYDSPEGQIGSVLFGGHMH-WGYWDESNSKDNFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAK 108 (298)
Q Consensus 30 ~~~~~~~~~yd~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 108 (298)
.....+.++|+.. ++.|+.+...... ...|.. .....+...+.. ..++.+|||+|||+|.++..+
T Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l-- 85 (215)
T 2zfu_A 20 GPSSAAQRLFQED-PEAFLLYHRGFQSQVKKWPL--------QPVDRIARDLRQ---RPASLVVADFGCGDCRLASSI-- 85 (215)
T ss_dssp SCHHHHHHHHHHC-HHHHHHHHHHHHHHHTTSSS--------CHHHHHHHHHHT---SCTTSCEEEETCTTCHHHHHC--
T ss_pred hHHHHHHHHHHHh-HHHHHHHHHHHHhhhcccch--------hHHHHHHHHHhc---cCCCCeEEEECCcCCHHHHHh--
Confidence 3445667788877 7777754321100 011221 111223333321 256789999999999998766
Q ss_pred hcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcE
Q psy2408 109 AKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSI 187 (298)
Q Consensus 109 ~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~ 187 (298)
+.+++|+|+|+. ++.++++|+.++++++++||+|++..++++ .++ .+++++.++|+|||+
T Consensus 86 --~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~ 146 (215)
T 2zfu_A 86 --RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGL 146 (215)
T ss_dssp --CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEE
T ss_pred --hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeE
Confidence 368999999986 367899999998888889999999999964 777 999999999999999
Q ss_pred EEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 188 LTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 188 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
+++.++.. .+.+.+++..+++++||.++......
T Consensus 147 l~i~~~~~--------------------~~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 147 LKVAEVSS--------------------RFEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp EEEEECGG--------------------GCSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred EEEEEcCC--------------------CCCCHHHHHHHHHHCCCEEEEEecCC
Confidence 99987542 12267899999999999988865433
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.74 E-value=3.7e-17 Score=128.37 Aligned_cols=134 Identities=14% Similarity=0.238 Sum_probs=111.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+...+++.+.+.++.+|||+|||+|..+..+++ .+.+++++|+|+.+++.+++++...++ .+++++++|+.+ +++
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~~ 97 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VLD 97 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-ccc
Confidence 45566777777778889999999999999999999 778999999999999999999998887 469999999987 566
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++..+ .+. .+++++.++ |||.+++..... . ...++.+.++++||
T Consensus 98 ~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~-------~---------------~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 98 KLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL-------E---------------NAAKIINEFESRGY 149 (183)
T ss_dssp GCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH-------H---------------HHHHHHHHHHHTTC
T ss_pred CCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc-------c---------------cHHHHHHHHHHcCC
Confidence 679999999887 555 899999998 999999987541 1 12467788999998
Q ss_pred cEEEEE
Q psy2408 233 ELIKID 238 (298)
Q Consensus 233 ~~~~~~ 238 (298)
.+....
T Consensus 150 ~~~~~~ 155 (183)
T 2yxd_A 150 NVDAVN 155 (183)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 766543
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.74 E-value=1e-17 Score=137.75 Aligned_cols=130 Identities=14% Similarity=0.107 Sum_probs=104.6
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC---CCCeeEEE
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD---NDSFDGGW 161 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~V~ 161 (298)
+.++.+|||+|||+|..+..++.. .+.+|+++|+|+.+++.+++++...+++ +++++++|+.+++++ +++||+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEE
Confidence 356789999999999999999874 4679999999999999999999988875 599999999877643 57899999
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
+.. +.+. .+++.+.++|+|||++++..... . .. ...++...++++||.+.....+
T Consensus 147 ~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~----~-~~---------------~~~~~~~~l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 147 ARA----VARLSVLSELCLPLVKKNGLFVALKAAS----A-EE---------------ELNAGKKAITTLGGELENIHSF 202 (240)
T ss_dssp EEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-----C-HH---------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred Eec----cCCHHHHHHHHHHhcCCCCEEEEEeCCC----c-hH---------------HHHHHHHHHHHcCCeEeEEEEE
Confidence 866 3566 99999999999999998863221 1 01 0235667889999998876653
No 116
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.74 E-value=2.8e-17 Score=142.73 Aligned_cols=145 Identities=12% Similarity=0.198 Sum_probs=112.6
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEec
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFF 163 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~ 163 (298)
.+.++.+|||||||+|..+..+++.. +.+++++|+ +.+++.+++. .+++++.+|+.+ +++ .||+|++.
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CCC--CccEEEee
Confidence 34567899999999999999999874 679999999 9998877641 359999999976 555 39999999
Q ss_pred ccccccChH---HHHHHHhhcccC---CcEEEEEeCCCCCCCCChh--HHHHHHHh---hcccCCCCcchHHHHHHhCCC
Q psy2408 164 ESIFHMNHS---AALNEARRVLKS---GSILTLTDLPLLSVSKNDN--KFKEYVKK---NIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 164 ~~l~~~~~~---~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gf 232 (298)
.+++|++++ .+|++++++|+| ||++++.++........+. ........ ......++.++|.++++++||
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCC
Confidence 999999987 999999999999 9999999887554332110 11111111 012345678999999999999
Q ss_pred cEEEEEeC
Q psy2408 233 ELIKIDDI 240 (298)
Q Consensus 233 ~~~~~~~~ 240 (298)
++++....
T Consensus 334 ~~~~~~~~ 341 (352)
T 1fp2_A 334 QHYKISPL 341 (352)
T ss_dssp CEEEEEEE
T ss_pred CeeEEEec
Confidence 99887663
No 117
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.74 E-value=2.6e-17 Score=136.47 Aligned_cols=140 Identities=18% Similarity=0.197 Sum_probs=116.8
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
....++..+.+.++.+|||+|||+|.++..+++.. +.+++++|+|+.+++.|++++...+++++++++++|+.+. ++
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IE 159 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CC
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cC
Confidence 34567788888899999999999999999999863 6799999999999999999999988877799999999874 56
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC-
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG- 231 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G- 231 (298)
+++||+|++ +.+++ .+++++.++|+|||++++..+.. . ...++.+.++++|
T Consensus 160 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~-------~---------------~~~~~~~~l~~~g~ 212 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS-------N---------------QVMRLHEKLREFKD 212 (255)
T ss_dssp CCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH-------H---------------HHHHHHHHHHHTGG
T ss_pred CCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH-------H---------------HHHHHHHHHHHcCC
Confidence 788999987 45677 89999999999999999976541 1 1245677889999
Q ss_pred -CcEEEEEeCCCC
Q psy2408 232 -FELIKIDDITSH 243 (298)
Q Consensus 232 -f~~~~~~~~~~~ 243 (298)
|..++..+....
T Consensus 213 ~f~~~~~~e~~~r 225 (255)
T 3mb5_A 213 YFMKPRTINVLVF 225 (255)
T ss_dssp GBSCCEEECCCCC
T ss_pred CccccEEEEEeee
Confidence 988877665444
No 118
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.73 E-value=1e-16 Score=129.41 Aligned_cols=129 Identities=18% Similarity=0.199 Sum_probs=104.0
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~ 163 (298)
.++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|++++...++ .++.++++|+.+++ +++++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 457799999999999999999874 67999999999999999999998887 57999999998876 667899999988
Q ss_pred ccccccCh---------HHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 164 ESIFHMNH---------SAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 164 ~~l~~~~~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
....+... ..+++++.++|+|||.+++.... .. . .+.+.+.++++||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------~~-~--------------~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN-------RG-L--------------FEYSLVSFSQYGMKL 176 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-------HH-H--------------HHHHHHHHHHHTCEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-------HH-H--------------HHHHHHHHHHCCCee
Confidence 65433221 27999999999999999986432 01 0 135566788889987
Q ss_pred EEEE
Q psy2408 235 IKID 238 (298)
Q Consensus 235 ~~~~ 238 (298)
+...
T Consensus 177 ~~~~ 180 (214)
T 1yzh_A 177 NGVW 180 (214)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7655
No 119
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.73 E-value=3.2e-17 Score=129.69 Aligned_cols=136 Identities=21% Similarity=0.210 Sum_probs=110.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+...++..+.+.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++...++..++.+.++|+.+ +++
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 96 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALC 96 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcc
Confidence 4556667777778889999999999999999999854 89999999999999999999988876689999999876 223
Q ss_pred C-CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 154 N-DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 154 ~-~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
. ++||+|++..+++ +. .+++++.++|+|||.+++..... . +..++...+++.|
T Consensus 97 ~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~-------~---------------~~~~~~~~l~~~g 151 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILL-------E---------------TKFEAMECLRDLG 151 (192)
T ss_dssp TSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBH-------H---------------HHHHHHHHHHHTT
T ss_pred cCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCc-------c---------------hHHHHHHHHHHCC
Confidence 2 5899999987764 45 89999999999999999976541 1 1246778899999
Q ss_pred CcEEE
Q psy2408 232 FELIK 236 (298)
Q Consensus 232 f~~~~ 236 (298)
|.+..
T Consensus 152 ~~~~~ 156 (192)
T 1l3i_A 152 FDVNI 156 (192)
T ss_dssp CCCEE
T ss_pred CceEE
Confidence 95443
No 120
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.73 E-value=1e-16 Score=134.49 Aligned_cols=141 Identities=16% Similarity=0.207 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
..+.++..+++.+. .++.+|||+|||+|..+..++... +.+|+++|+|+.+++.+++++...+++ +++++++|+.+.
T Consensus 94 ~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~ 171 (276)
T 2b3t_A 94 DTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA 171 (276)
T ss_dssp THHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG
T ss_pred hHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh
Confidence 34667777888776 567899999999999999999764 679999999999999999999988875 699999999874
Q ss_pred CCCCCCeeEEEec-------------ccccccC------------hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhH
Q psy2408 151 PFDNDSFDGGWFF-------------ESIFHMN------------HS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNK 204 (298)
Q Consensus 151 ~~~~~~fD~V~~~-------------~~l~~~~------------~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~ 204 (298)
++.++||+|+++ .+++|.+ .. .+++++.++|+|||++++...
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------- 239 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------- 239 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------
Confidence 346789999997 3444433 23 889999999999999998621
Q ss_pred HHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 205 FKEYVKKNIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
+.+.+++.++++++||..+...
T Consensus 240 ------------~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 240 ------------WQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp ------------SSCHHHHHHHHHHTTCTTCCEE
T ss_pred ------------chHHHHHHHHHHHCCCcEEEEE
Confidence 1234578889999999866543
No 121
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.73 E-value=6.1e-17 Score=130.27 Aligned_cols=114 Identities=23% Similarity=0.135 Sum_probs=101.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
......+++.+.+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++...+++ +++++.+|+.+...+
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCcc
Confidence 456677788888889999999999999999999995 789999999999999999999988875 699999999886555
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.++||+|++..+++++++ ++.++|+|||++++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~-----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT-----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT-----HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH-----HHHHhcccCcEEEEEEcC
Confidence 689999999999999887 588999999999997665
No 122
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.73 E-value=5.6e-17 Score=136.08 Aligned_cols=137 Identities=13% Similarity=0.140 Sum_probs=108.8
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDS 156 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 156 (298)
...+.+.+ .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.++++++++|+.+++. +++
T Consensus 116 ~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~ 192 (278)
T 2frn_A 116 RVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENI 192 (278)
T ss_dssp HHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSC
T ss_pred HHHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCC
Confidence 33444443 578899999999999999999853337999999999999999999999987779999999999865 689
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
||+|++... ... .++.++.++|+|||++++.+........ ....+.+...++++||.+.
T Consensus 193 fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----------------~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 193 ADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP----------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp EEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT----------------TTTHHHHHHHHHHTTCEEE
T ss_pred ccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeecccccc----------------ccHHHHHHHHHHHcCCeeE
Confidence 999988432 233 8999999999999999998766322111 1124567788999999887
Q ss_pred E
Q psy2408 236 K 236 (298)
Q Consensus 236 ~ 236 (298)
.
T Consensus 253 ~ 253 (278)
T 2frn_A 253 K 253 (278)
T ss_dssp E
T ss_pred E
Confidence 6
No 123
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.73 E-value=5e-18 Score=139.71 Aligned_cols=164 Identities=13% Similarity=0.147 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHhCCC-CCCCeEEEeCCCC--CHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE
Q psy2408 70 AQGSDKLSRIMINKTSI-TKGQRFIDIGCGF--GLSGIRLAKA--KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH 144 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~~-~~~~~vLDiGcG~--G~~~~~l~~~--~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~ 144 (298)
....+......++.+.. ....+|||||||+ +..+..+++. .+++|+++|.|+.|++.|+.++...+ ..++++++
T Consensus 59 a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~ 137 (277)
T 3giw_A 59 MRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVE 137 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEE
T ss_pred HHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEE
Confidence 34445555555555542 2346999999997 4444555543 47899999999999999999986542 24799999
Q ss_pred CCCCCCC----CC--CCCee-----EEEecccccccCh---H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHH
Q psy2408 145 GDALNLP----FD--NDSFD-----GGWFFESIFHMNH---S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYV 209 (298)
Q Consensus 145 ~d~~~~~----~~--~~~fD-----~V~~~~~l~~~~~---~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 209 (298)
+|+.+++ .+ .+.|| .|+++.+|||+++ + .+++++.+.|+|||+|++++................+
T Consensus 138 aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~ 217 (277)
T 3giw_A 138 ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREY 217 (277)
T ss_dssp CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHH
T ss_pred ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHH
Confidence 9998852 11 24455 6889999999998 5 8999999999999999999876442111001111222
Q ss_pred Hh-hcccCCCCcchHHHHHHhCCCcEEE
Q psy2408 210 KK-NIHSNFILVEHYPDLLNKSGFELIK 236 (298)
Q Consensus 210 ~~-~~~~~~~~~~~~~~~l~~~Gf~~~~ 236 (298)
.. .....+.+.+++..+|. ||++++
T Consensus 218 ~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 218 AARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred HhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 21 22235678899999995 998665
No 124
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.72 E-value=6e-17 Score=134.47 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=113.6
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEECCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAE-GLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~ 153 (298)
...++..+.+.++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.+++++... + ..++.+.++|+.+.+++
T Consensus 85 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 85 ASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCC
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCC
Confidence 3567777888899999999999999999999863 579999999999999999998877 6 45799999999987777
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++ +.+++ .+++++.++|+|||++++..+.. . ...++...++++||
T Consensus 164 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~-------~---------------~~~~~~~~l~~~gf 216 (258)
T 2pwy_A 164 EAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI-------T---------------QVLELVRAAEAHPF 216 (258)
T ss_dssp TTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH-------H---------------HHHHHHHHHTTTTE
T ss_pred CCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH-------H---------------HHHHHHHHHHHCCC
Confidence 789999987 45677 99999999999999999987541 1 12356677888999
Q ss_pred cEEEEEeC
Q psy2408 233 ELIKIDDI 240 (298)
Q Consensus 233 ~~~~~~~~ 240 (298)
..++..+.
T Consensus 217 ~~~~~~~~ 224 (258)
T 2pwy_A 217 RLERVLEV 224 (258)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 98776654
No 125
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.72 E-value=3.9e-17 Score=131.69 Aligned_cols=114 Identities=17% Similarity=0.158 Sum_probs=95.8
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
+...+...+ .++.+|||+|||+|.++..+++....+++++|+|+.+++.++++... ..++.++++|+.+++++++
T Consensus 32 ~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~ 106 (215)
T 2pxx_A 32 FRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSA 106 (215)
T ss_dssp HHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSS
T ss_pred HHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCC
Confidence 344444443 67889999999999999999985323899999999999999998764 2469999999999888888
Q ss_pred CeeEEEecccccccC---------------hH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 156 SFDGGWFFESIFHMN---------------HS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~---------------~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+||+|++..+++++. +. .+++++.++|+|||++++.++.
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 999999998887765 44 9999999999999999998876
No 126
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.72 E-value=6.9e-17 Score=139.30 Aligned_cols=114 Identities=19% Similarity=0.248 Sum_probs=97.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...+.+.+.+.+.++.+|||+|||+|.++..+++....+|+|+|+|+ +++.|++++...++.+++.++++|+.++++++
T Consensus 51 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 51 SYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC
T ss_pred HHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC
Confidence 34456666666678899999999999999999985334999999996 99999999999888778999999999988887
Q ss_pred CCeeEEEecc---cccccChH-HHHHHHhhcccCCcEEE
Q psy2408 155 DSFDGGWFFE---SIFHMNHS-AALNEARRVLKSGSILT 189 (298)
Q Consensus 155 ~~fD~V~~~~---~l~~~~~~-~~l~~~~r~LkpgG~l~ 189 (298)
++||+|++.. .+.+..+. .++.++.++|+|||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999876 45555666 89999999999999987
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.72 E-value=2.9e-17 Score=137.80 Aligned_cols=136 Identities=14% Similarity=0.184 Sum_probs=108.4
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEECCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA--KGCRVDGITISKFQQESAMKTAKAE-GLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~ 153 (298)
...++..+.+.++.+|||+|||+|..+..+++. .+.+|+++|+|+.+++.+++++... +. ++++++++|+.+ +++
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~ 176 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FIS 176 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCC
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCc
Confidence 346677788889999999999999999999986 2679999999999999999999877 64 479999999988 566
Q ss_pred CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCC
Q psy2408 154 NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGF 232 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 232 (298)
+++||+|++ +++++ .+++++.++|+|||++++.+... . ..+.+...++++||
T Consensus 177 ~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-------~---------------~~~~~~~~l~~~Gf 229 (275)
T 1yb2_A 177 DQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF-------D---------------QSEKTVLSLSASGM 229 (275)
T ss_dssp SCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH-------H---------------HHHHHHHHSGGGTE
T ss_pred CCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH-------H---------------HHHHHHHHHHHCCC
Confidence 788999987 56777 99999999999999999987541 0 12356677888999
Q ss_pred cEEEEEeCC
Q psy2408 233 ELIKIDDIT 241 (298)
Q Consensus 233 ~~~~~~~~~ 241 (298)
..++.....
T Consensus 230 ~~~~~~~~~ 238 (275)
T 1yb2_A 230 HHLETVELM 238 (275)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEe
Confidence 988776543
No 128
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.72 E-value=5e-16 Score=125.81 Aligned_cols=149 Identities=17% Similarity=0.120 Sum_probs=103.2
Q ss_pred HHHHHHHHHhC---CCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 74 DKLSRIMINKT---SITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 74 ~~~~~~l~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
.++...++..+ .+.++.+|||+|||+|..+..+++.. .++|+++|+|+.|++...+.+... .|+.++++|+.
T Consensus 59 skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~ 135 (232)
T 3id6_C 59 SKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADAR 135 (232)
T ss_dssp CHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTT
T ss_pred HHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccc
Confidence 34455555554 48899999999999999999999863 469999999999986665554443 47999999997
Q ss_pred CCC---CCCCCeeEEEecccccccChH-H-HHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchH
Q psy2408 149 NLP---FDNDSFDGGWFFESIFHMNHS-A-ALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHY 223 (298)
Q Consensus 149 ~~~---~~~~~fD~V~~~~~l~~~~~~-~-~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
... ...++||+|++..+. ++. . ++..+.++|||||+|++.......... ...--...+.
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t-------------~~~~e~~~~~ 199 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVT-------------KDPKEIYKTE 199 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC--------------------CCSSSSTTHH
T ss_pred cchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccC-------------CCHHHHHHHH
Confidence 642 124689999987543 555 4 445666699999999998533110000 0000112456
Q ss_pred HHHHHhCCCcEEEEEeCC
Q psy2408 224 PDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~ 241 (298)
...|+++||++++...+.
T Consensus 200 ~~~L~~~gf~~~~~~~l~ 217 (232)
T 3id6_C 200 VEKLENSNFETIQIINLD 217 (232)
T ss_dssp HHHHHHTTEEEEEEEECT
T ss_pred HHHHHHCCCEEEEEeccC
Confidence 678889999999887763
No 129
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.71 E-value=3.2e-16 Score=131.71 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeC-CHHHHHHHHHHH-----HhcCCC----Cce
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITI-SKFQQESAMKTA-----KAEGLL----DKV 140 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~-s~~~l~~a~~~~-----~~~~~~----~~i 140 (298)
....+.+.+.......++.+|||+|||+|.++..+++. +. +|+++|+ |+.+++.+++++ ...++. +++
T Consensus 63 ~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 45667777777665567889999999999999988884 55 9999999 899999999998 555543 468
Q ss_pred EEEECCCCCC--CC----CCCCeeEEEecccccccChH-HHHHHHhhccc---C--CcEEEEEeCCCCCCCCChhHHHHH
Q psy2408 141 NFLHGDALNL--PF----DNDSFDGGWFFESIFHMNHS-AALNEARRVLK---S--GSILTLTDLPLLSVSKNDNKFKEY 208 (298)
Q Consensus 141 ~~~~~d~~~~--~~----~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~ 208 (298)
.+...|..+. .+ +.++||+|++..++++.++. .+++.+.++|+ | ||++++.........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~--------- 212 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL--------- 212 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------------
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc---------
Confidence 8887765542 11 35789999999999998888 99999999999 9 998877533311100
Q ss_pred HHhhcccCCCCcchHHHHHHhCC-CcEEEEEe
Q psy2408 209 VKKNIHSNFILVEHYPDLLNKSG-FELIKIDD 239 (298)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 239 (298)
......+...+++.| |.+..+..
T Consensus 213 --------~~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 213 --------AERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp -----------CTHHHHHHHHSTTEEEEEEEC
T ss_pred --------chhHHHHHHHHHhcCCEEEEEecc
Confidence 012356777889999 99887754
No 130
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.71 E-value=3e-17 Score=132.73 Aligned_cols=106 Identities=18% Similarity=0.224 Sum_probs=88.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C--CCCCCeeEEEec
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P--FDNDSFDGGWFF 163 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~fD~V~~~ 163 (298)
++.+|||||||+|..+..+++.. +..|+|+|+|+.+++.|++++...++. ++.++++|+.++ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 56799999999999999999864 678999999999999999999988875 699999998874 3 678999999987
Q ss_pred ccccccChH---------HHHHHHhhcccCCcEEEEEeCC
Q psy2408 164 ESIFHMNHS---------AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 164 ~~l~~~~~~---------~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
....+.... .+++++.++|||||.+++.+..
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 544333221 4999999999999999997643
No 131
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.71 E-value=2e-16 Score=127.56 Aligned_cols=128 Identities=20% Similarity=0.169 Sum_probs=100.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~ 163 (298)
.++.+|||||||+|.++..+++.. +.+++|+|+|+.+++.|++++...++ .++.++++|+.+++ +++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 356799999999999999999864 67999999999999999999998887 46999999998864 667899999876
Q ss_pred ccccccC---------hHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcE
Q psy2408 164 ESIFHMN---------HSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFEL 234 (298)
Q Consensus 164 ~~l~~~~---------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 234 (298)
....+.. ...+++++.++|+|||.+++.... ..+ ...+...++++||..
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--------~~~--------------~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--------RGL--------------FEYSLKSFSEYGLLL 173 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--------HHH--------------HHHHHHHHHHHTCEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--------HHH--------------HHHHHHHHHHCCCcc
Confidence 5443322 137999999999999999987533 110 123456677788876
Q ss_pred EEE
Q psy2408 235 IKI 237 (298)
Q Consensus 235 ~~~ 237 (298)
...
T Consensus 174 ~~~ 176 (213)
T 2fca_A 174 TYV 176 (213)
T ss_dssp EEE
T ss_pred ccc
Confidence 654
No 132
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.71 E-value=3.1e-17 Score=131.14 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=89.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCCC--CCCCC-eeEEEec
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLL-DKVNFLHGDALNLP--FDNDS-FDGGWFF 163 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~-fD~V~~~ 163 (298)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++. ++++++++|+.++. .++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 67899999999999999877754458999999999999999999988874 57999999987642 23578 9999998
Q ss_pred ccccccChH-HHHHHH--hhcccCCcEEEEEeCCC
Q psy2408 164 ESIFHMNHS-AALNEA--RRVLKSGSILTLTDLPL 195 (298)
Q Consensus 164 ~~l~~~~~~-~~l~~~--~r~LkpgG~l~i~~~~~ 195 (298)
..+ +..+. .+++.+ .++|+|||.+++.....
T Consensus 133 ~~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPF-HFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-CCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 774 35556 888888 77899999999976653
No 133
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.70 E-value=8e-17 Score=139.43 Aligned_cols=113 Identities=20% Similarity=0.188 Sum_probs=94.7
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
+.+.....+.++.+|||+|||+|.++..+++....+|+|+|+| ++++.|++++...++.++++++++|+.++++++++|
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 134 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKV 134 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCE
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCce
Confidence 3344333445788999999999999999999633499999999 599999999999998888999999999998888999
Q ss_pred eEEEeccccc---ccChH-HHHHHHhhcccCCcEEEEE
Q psy2408 158 DGGWFFESIF---HMNHS-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 158 D~V~~~~~l~---~~~~~-~~l~~~~r~LkpgG~l~i~ 191 (298)
|+|++..+.+ +.... .++.++.++|+|||+++..
T Consensus 135 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 135 DIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp EEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 9999876544 33566 9999999999999998743
No 134
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.70 E-value=2.1e-17 Score=129.34 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 72 GSDKLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 72 ~~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
....+.+.+++.+. ..++.+|||+|||+|..+..+++....+|+|+|+|+.+++.+++++...++.+++.++++|+.+.
T Consensus 14 ~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 14 TSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp ----CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 33455666666665 56788999999999999999998634699999999999999999999888777899999998773
Q ss_pred -CCCCCCeeEEEecccccccChH-HHHHHHh--hcccCCcEEEEEeCCC
Q psy2408 151 -PFDNDSFDGGWFFESIFHMNHS-AALNEAR--RVLKSGSILTLTDLPL 195 (298)
Q Consensus 151 -~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~--r~LkpgG~l~i~~~~~ 195 (298)
+...++||+|++...+.. ... ..++.+. ++|+|||.+++.....
T Consensus 94 ~~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 94 IDCLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHhhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 333467999999766532 233 6677776 9999999999986653
No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.70 E-value=3.2e-16 Score=125.93 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=81.9
Q ss_pred CCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC----CCCCCCee
Q psy2408 84 TSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL----PFDNDSFD 158 (298)
Q Consensus 84 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~fD 158 (298)
+.+.++.+|||+|||+|..+..+++.. +.+|+|+|+|+.|++.+.+.+... .++.++.+|+... +++ ++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-ccee
Confidence 456788999999999999999999864 369999999999887777666543 3688999998773 444 7899
Q ss_pred EEEecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 159 GGWFFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 159 ~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+|++.. ..+ ... .+++++.++|||||++++..
T Consensus 129 ~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999872 221 223 56999999999999999973
No 136
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.70 E-value=9.8e-17 Score=139.63 Aligned_cols=152 Identities=13% Similarity=0.191 Sum_probs=115.8
Q ss_pred HHHHhC--CCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 79 IMINKT--SITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 79 ~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
.+++.+ .+.++.+|||||||+|..+..+++.. +.+++++|+ +.+++.+++ . .+++++.+|+.+ +++
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~-- 250 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP-- 250 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--
Confidence 345544 34566899999999999999999874 579999999 788876653 2 359999999987 665
Q ss_pred CeeEEEecccccccChH---HHHHHHhhcccC---CcEEEEEeCCCCCCCCCh--hHHHHHHH----hhcccCCCCcchH
Q psy2408 156 SFDGGWFFESIFHMNHS---AALNEARRVLKS---GSILTLTDLPLLSVSKND--NKFKEYVK----KNIHSNFILVEHY 223 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~---~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~ 223 (298)
+||+|++..++++++++ .+|++++++|+| ||++++.++........+ ........ .......++.++|
T Consensus 251 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~ 330 (358)
T 1zg3_A 251 SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEW 330 (358)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHH
T ss_pred CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHH
Confidence 49999999999999986 999999999999 999999988755433211 01111111 1123456789999
Q ss_pred HHHHHhCCCcEEEEEeCC
Q psy2408 224 PDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~ 241 (298)
.++|+++||++++.....
T Consensus 331 ~~ll~~aGf~~~~~~~~~ 348 (358)
T 1zg3_A 331 EKLIYDAGFSSYKITPIS 348 (358)
T ss_dssp HHHHHHTTCCEEEEEEET
T ss_pred HHHHHHcCCCeeEEEecC
Confidence 999999999999887643
No 137
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.70 E-value=3e-17 Score=126.74 Aligned_cols=116 Identities=8% Similarity=0.091 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
..+.+...+...+ .+..+|||+|||+|.++..++.. ++++|+++|+|+.|++.+++++...|+..++.+ .|....
T Consensus 35 ~ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 35 TLNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD 110 (200)
T ss_dssp GHHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH
T ss_pred hHHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc
Confidence 3455666666666 45779999999999999999876 467999999999999999999999888666666 555443
Q ss_pred CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
.+.++||+|++..+++++++. ..+.++.+.|+|||.++-..
T Consensus 111 -~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred -CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 346889999999999999444 67779999999999887765
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.70 E-value=1.2e-16 Score=124.12 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=96.3
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. ..+++++++|+.+ ++++++||+|+++..+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPY 88 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCC
Confidence 45679999999999999999985 4 99999999999987 2468999999988 5566899999998887
Q ss_pred cccCh---------H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEE
Q psy2408 167 FHMNH---------S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIK 236 (298)
Q Consensus 167 ~~~~~---------~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 236 (298)
++.++ . .+++++.+.+ |||++++..... ...+++.++++++||..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------------------~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 89 VPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------------------NRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp BTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------------------GCHHHHHHHHHHTTCEEEE
T ss_pred ccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------------------CCHHHHHHHHHHCCCcEEE
Confidence 75332 3 8889999999 999999976441 1345788899999999887
Q ss_pred EEeC
Q psy2408 237 IDDI 240 (298)
Q Consensus 237 ~~~~ 240 (298)
....
T Consensus 146 ~~~~ 149 (170)
T 3q87_B 146 LKVR 149 (170)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6653
No 139
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.70 E-value=9.6e-17 Score=131.29 Aligned_cols=143 Identities=10% Similarity=0.061 Sum_probs=104.4
Q ss_pred HHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC---CCCCCC
Q psy2408 81 INKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN---LPFDND 155 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~---~~~~~~ 155 (298)
++.+.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.+.+... .++.++++|+.+ +++.++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 345667789999999999999999999874 479999999999988888877664 469999999987 344567
Q ss_pred CeeEEEecccccccChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCc
Q psy2408 156 SFDGGWFFESIFHMNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
+||+|++... .++. .++.++.++|+|||++++.......... ...... +. .+ .++|+++||+
T Consensus 147 ~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~--~~~~~~---------~~-~~-~~~l~~~Gf~ 210 (233)
T 2ipx_A 147 MVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDST--ASAEAV---------FA-SE-VKKMQQENMK 210 (233)
T ss_dssp CEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSS--SCHHHH---------HH-HH-HHTTGGGTEE
T ss_pred cEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccC--CCHHHH---------HH-HH-HHHHHHCCCc
Confidence 9999998544 3333 6688999999999999996433110111 000011 11 12 4788999999
Q ss_pred EEEEEeCCC
Q psy2408 234 LIKIDDITS 242 (298)
Q Consensus 234 ~~~~~~~~~ 242 (298)
+++...+..
T Consensus 211 ~~~~~~~~~ 219 (233)
T 2ipx_A 211 PQEQLTLEP 219 (233)
T ss_dssp EEEEEECTT
T ss_pred eEEEEecCC
Confidence 988666543
No 140
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.70 E-value=4.5e-17 Score=135.01 Aligned_cols=164 Identities=13% Similarity=0.086 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhCCC--CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 72 GSDKLSRIMINKTSI--TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
....+...++..+.. .++.+|||+|||+|.++..++... +.+|+|+|+|+.+++.|++++...++.++++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344566666665543 257799999999999999998863 78999999999999999999999888777999999976
Q ss_pred CC---CCC---CCCeeEEEecccccccC--------------hH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHH
Q psy2408 149 NL---PFD---NDSFDGGWFFESIFHMN--------------HS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFK 206 (298)
Q Consensus 149 ~~---~~~---~~~fD~V~~~~~l~~~~--------------~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 206 (298)
+. +++ +++||+|+++-.+++.. .+ .++.++.++|+|||.+.+.+... ....
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~-------~~~~ 199 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRII-------HDSL 199 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHH-------HHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHH-------HHHH
Confidence 52 344 26899999985544332 12 56788999999999887653210 1111
Q ss_pred HHHHhh--c---ccCCCCcchHHHHHHhCCCcEEEEEeCCC
Q psy2408 207 EYVKKN--I---HSNFILVEHYPDLLNKSGFELIKIDDITS 242 (298)
Q Consensus 207 ~~~~~~--~---~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 242 (298)
.+.... . .......+++.++++++||..++...+..
T Consensus 200 ~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~ 240 (254)
T 2h00_A 200 QLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQ 240 (254)
T ss_dssp HHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred hcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEec
Confidence 111110 0 11122336788999999999887766543
No 141
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.70 E-value=2.3e-16 Score=132.43 Aligned_cols=138 Identities=20% Similarity=0.211 Sum_probs=113.5
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...++..+.+.++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.|++++...++.+++.++.+|+.+. +++
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 179 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDE 179 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSC
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccC
Confidence 3466777788899999999999999999999863 5799999999999999999999888766899999999876 566
Q ss_pred CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCc
Q psy2408 155 DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
++||+|++ +.+++ .+++++.++|+|||++++.+... . ...++...|++.||.
T Consensus 180 ~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~-------~---------------~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 180 KDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT-------N---------------QVQETLKKLQELPFI 232 (277)
T ss_dssp CSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH-------H---------------HHHHHHHHHHHSSEE
T ss_pred CccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH-------H---------------HHHHHHHHHHHCCCc
Confidence 78999987 45677 99999999999999999986541 1 123566778889998
Q ss_pred EEEEEeCCC
Q psy2408 234 LIKIDDITS 242 (298)
Q Consensus 234 ~~~~~~~~~ 242 (298)
.++....-.
T Consensus 233 ~~~~~~~~~ 241 (277)
T 1o54_A 233 RIEVWESLF 241 (277)
T ss_dssp EEEEECCCC
T ss_pred eeEEEEEee
Confidence 877665433
No 142
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.69 E-value=1.4e-16 Score=137.91 Aligned_cols=117 Identities=17% Similarity=0.226 Sum_probs=99.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
....+.+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++.+|+.+++++
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 344566777777778899999999999999999985345999999996 8999999999888878899999999998765
Q ss_pred CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~ 192 (298)
++||+|++..+++|+... ..+.++.++|+|||.+++..
T Consensus 115 -~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp -SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred -CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 689999999888877543 88889999999999998653
No 143
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.69 E-value=2e-16 Score=136.47 Aligned_cols=157 Identities=20% Similarity=0.176 Sum_probs=93.3
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcC----------CCCceEEEE
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG--CRVDGITISKFQQESAMKTAKAEG----------LLDKVNFLH 144 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~l~~a~~~~~~~~----------~~~~i~~~~ 144 (298)
...++..+.+.++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ...++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 45566667788999999999999999999998643 799999999999999999987532 235799999
Q ss_pred CCCCCC--CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh-h-------c
Q psy2408 145 GDALNL--PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK-N-------I 213 (298)
Q Consensus 145 ~d~~~~--~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-~-------~ 213 (298)
+|+.+. ++++++||+|++. ++++ .++.++.++|+|||++++........ ......+... . .
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~ 245 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNITQV---IELLDGIRTCELALSCEKIS 245 (336)
T ss_dssp SCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSHHHH---HHHHHHHHHHTCCEEEEEEE
T ss_pred CChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCHHHH---HHHHHHHHhcCCCcccceEE
Confidence 999886 4566789999873 4556 78999999999999999876542110 0111111110 0 0
Q ss_pred --ccCCCCc-------chHHHHHHhCCCcEEEEEeCC
Q psy2408 214 --HSNFILV-------EHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 214 --~~~~~~~-------~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
....+.. .++...|+++||..++.....
T Consensus 246 ~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 246 EVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp CCCCCCEEECC--------------------------
T ss_pred EecccceEEEeecccccchhhhhcccccccccccccc
Confidence 0011111 277888999999988876554
No 144
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.69 E-value=6.9e-17 Score=133.20 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=104.9
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC---CCCeeEEE
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD---NDSFDGGW 161 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~V~ 161 (298)
..++.+|||||||+|..+..++.. .+.+|+++|+|+.+++.+++++...++. +++++++|+.+++.. .++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 356789999999999999999986 4689999999999999999999998885 599999999887532 47999999
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
+..+ .+. .+++.+.++|+|||++++..... . .. ...++...++..||.+.+...+
T Consensus 157 s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~----~-~~---------------e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLEVGGAAVAMKGPR----V-EE---------------ELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEEEEEEEEEEECSC----C-HH---------------HHTTHHHHHHHHTEEEEEEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCC----c-HH---------------HHHHHHHHHHHcCCeEEEEEEe
Confidence 8643 455 99999999999999998864321 1 01 1235677788889988887765
No 145
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.69 E-value=1.2e-16 Score=132.34 Aligned_cols=126 Identities=21% Similarity=0.212 Sum_probs=103.9
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccc
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFES 165 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 165 (298)
+.++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.+++++...++. +++.++|+.+. +++++||+|+++..
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPFGPFDLLVANLY 193 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGGCCEEEEEEECC
T ss_pred cCCCCEEEEecCCCcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcCCCCCEEEECCc
Confidence 46788999999999999999888 5669999999999999999999988765 88999998762 34578999998654
Q ss_pred ccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 166 IFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 166 l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
.+ .. .++.++.++|+|||+++++..... ..+++.+.++++||.++.....
T Consensus 194 ~~---~~~~~l~~~~~~LkpgG~lils~~~~~----------------------~~~~v~~~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 194 AE---LHAALAPRYREALVPGGRALLTGILKD----------------------RAPLVREAMAGAGFRPLEEAAE 244 (254)
T ss_dssp HH---HHHHHHHHHHHHEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTCEEEEEEEE
T ss_pred HH---HHHHHHHHHHHHcCCCCEEEEEeeccC----------------------CHHHHHHHHHHCCCEEEEEecc
Confidence 43 23 899999999999999999765411 2457889999999999887653
No 146
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.69 E-value=1.8e-16 Score=138.59 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
.....+.+.......++.+|||+|||+|.++..+++. ++ +|+|+|+| .+++.|++++...++.++++++++|+.+++
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 3445566666677778999999999999999999995 55 99999999 999999999999999888999999999988
Q ss_pred CCCCCeeEEEeccccccc---ChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHM---NHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~---~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
++ ++||+|++..+.+++ ... .+++++.++|+|||.+++...
T Consensus 126 ~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 126 LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 76 899999996655554 345 899999999999999987544
No 147
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.69 E-value=8e-17 Score=130.46 Aligned_cols=125 Identities=22% Similarity=0.212 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECC
Q psy2408 70 AQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLL-DKVNFLHGD 146 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~d 146 (298)
......+...++...+..++.+|||+|||+|..+..+++.. +++|+++|+|+.+++.|++++...++. ++++++++|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 34556777777777765556699999999999999999864 689999999999999999999999987 789999999
Q ss_pred CCCC--CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 147 ALNL--PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 147 ~~~~--~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+.+. .+++++||+|++... ..+. .+++++.++|+|||++++.+..+.+
T Consensus 118 a~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g 168 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADALLDG 168 (221)
T ss_dssp HHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTTGGG
T ss_pred HHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 8764 233689999987643 2344 8999999999999999997766543
No 148
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.69 E-value=1.3e-16 Score=125.90 Aligned_cols=121 Identities=14% Similarity=0.041 Sum_probs=96.2
Q ss_pred HHHHHHHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-
Q psy2408 74 DKLSRIMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP- 151 (298)
Q Consensus 74 ~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~- 151 (298)
..+.+.+++.+. ..++.+|||+|||+|..+..+++....+|+++|+|+.+++.|++++...++.++++++++|+.+..
T Consensus 29 ~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 29 DKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp HHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 445555666553 357789999999999999998885446999999999999999999998887678999999987631
Q ss_pred ---CCCCCeeEEEecccccccChH-HHHHHH--hhcccCCcEEEEEeCCC
Q psy2408 152 ---FDNDSFDGGWFFESIFHMNHS-AALNEA--RRVLKSGSILTLTDLPL 195 (298)
Q Consensus 152 ---~~~~~fD~V~~~~~l~~~~~~-~~l~~~--~r~LkpgG~l~i~~~~~ 195 (298)
.++++||+|++...+. .... ..++.+ .++|+|||.+++.....
T Consensus 109 ~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 109 QFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2257899999987744 3444 777777 89999999999876553
No 149
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.69 E-value=6.6e-17 Score=131.18 Aligned_cols=119 Identities=20% Similarity=0.308 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
..++...++.. .++.+|||+|||+|..+..+++.. +++|+++|+|+.+++.|++++...++.++++++++|+.+.
T Consensus 46 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 46 KGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 34444444443 356799999999999999999863 6799999999999999999999988877899999997552
Q ss_pred -C-CC----CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 151 -P-FD----NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 151 -~-~~----~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
+ ++ .++||+|++....++..+. .++..+ ++|+|||++++.+...
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 2 12 2689999998877777666 888888 9999999999987664
No 150
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.68 E-value=3e-16 Score=134.73 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=94.1
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND 155 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 155 (298)
..+.+.+.+...++.+|||+|||+|.++..+++....+|+|+|+| .+++.|++++...++.++++++.+|+.+++++.+
T Consensus 26 y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 104 (328)
T 1g6q_1 26 YRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFP 104 (328)
T ss_dssp HHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSS
T ss_pred HHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCC
Confidence 334444444445788999999999999999998533499999999 6999999999999988889999999999887778
Q ss_pred CeeEEEeccc---ccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 156 SFDGGWFFES---IFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 156 ~fD~V~~~~~---l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
+||+|++..+ +.+.... .++.++.++|+|||.++.
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999998754 3344556 899999999999999874
No 151
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.68 E-value=4.5e-16 Score=136.84 Aligned_cols=121 Identities=16% Similarity=0.126 Sum_probs=97.9
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHH-------HHHHHhcCCC-CceEEEE
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESA-------MKTAKAEGLL-DKVNFLH 144 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a-------~~~~~~~~~~-~~i~~~~ 144 (298)
...+..+++.+.+.++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.| ++++...++. .++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 45566778888888999999999999999999999655 4799999999999988 8888887853 6799999
Q ss_pred CCCCCC--CC--CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 145 GDALNL--PF--DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 145 ~d~~~~--~~--~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
+|.... ++ ..++||+|+++.++ +.++. ..|+++.++|+|||++++.+...
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 865432 12 24689999987666 34555 88999999999999999986543
No 152
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.68 E-value=8.6e-16 Score=123.62 Aligned_cols=131 Identities=20% Similarity=0.155 Sum_probs=105.8
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
.+.+.. +++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...++.+++++..+|..+...+.++|
T Consensus 14 ~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~ 91 (230)
T 3lec_A 14 KVANYV--PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNI 91 (230)
T ss_dssp HHHTTS--CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHhC--CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccccccc
Confidence 344444 578899999999999999999963 34899999999999999999999999888999999998865444479
Q ss_pred eEEEecccccccChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 158 DGGWFFESIFHMNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 158 D~V~~~~~l~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
|+|+..++.- +. .++....+.|+++|+|+++... ..+.++.+|.+.||.++
T Consensus 92 D~IviaGmGg---~lI~~IL~~~~~~l~~~~~lIlqp~~------------------------~~~~lr~~L~~~Gf~i~ 144 (230)
T 3lec_A 92 DTITICGMGG---RLIADILNNDIDKLQHVKTLVLQPNN------------------------REDDLRKWLAANDFEIV 144 (230)
T ss_dssp CEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHTTEEEE
T ss_pred CEEEEeCCch---HHHHHHHHHHHHHhCcCCEEEEECCC------------------------ChHHHHHHHHHCCCEEE
Confidence 9988654432 22 8899999999999999987532 13477888999999888
Q ss_pred EEE
Q psy2408 236 KID 238 (298)
Q Consensus 236 ~~~ 238 (298)
+..
T Consensus 145 ~E~ 147 (230)
T 3lec_A 145 AED 147 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 755
No 153
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=1.4e-16 Score=127.32 Aligned_cols=119 Identities=10% Similarity=0.107 Sum_probs=93.0
Q ss_pred HHHHHHHHHhCCCC-CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-CC
Q psy2408 74 DKLSRIMINKTSIT-KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-LP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~~ 151 (298)
..+.+.+++.+... ++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++ .+++++++|+.+ ++
T Consensus 39 ~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~ 117 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLA 117 (202)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHS
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHh
Confidence 34444444444322 6789999999999999987775335999999999999999999998887 579999999877 35
Q ss_pred CCCCCeeEEEecccccccChH-HHHHHHhh--cccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHS-AALNEARR--VLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r--~LkpgG~l~i~~~~ 194 (298)
.+.++||+|++...+ +.... .+++.+.+ +|+|||.+++....
T Consensus 118 ~~~~~fD~V~~~~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 118 QKGTPHNIVFVDPPF-RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SCCCCEEEEEECCSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hcCCCCCEEEECCCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 556789999987763 34555 78888865 69999999987654
No 154
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.67 E-value=1.5e-16 Score=146.36 Aligned_cols=156 Identities=19% Similarity=0.278 Sum_probs=113.6
Q ss_pred chhhHHhhhcCCcccccccccCCceeEeeccCCCCCCcHHH--HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHH
Q psy2408 31 GKKTVATLYDSPEGQIGSVLFGGHMHWGYWDESNSKDNFAQ--GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAK 108 (298)
Q Consensus 31 ~~~~~~~~yd~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 108 (298)
...+++++++.. .+.|..+++.. +|........... ........+...+ ..+.+|||||||.|.++..|++
T Consensus 14 ~~~~~~~~~~~~-pe~y~~i~~~~----~~~~~~~r~~~~r~~~i~~~~~~~~~~~--~~~~~vLDvGCG~G~~~~~la~ 86 (569)
T 4azs_A 14 GTKDLNTLVSEL-PEIYQTIFGHP----EWDGDAARDCNQRLDLITEQYDNLSRAL--GRPLNVLDLGCAQGFFSLSLAS 86 (569)
T ss_dssp ---CHHHHHHHS-SCCCBCCTTCG----GGTTTCSBCCHHHHHHHHHHHHHHHHHH--TSCCEEEEETCTTSHHHHHHHH
T ss_pred ccccHHHHHhhC-HHHHhhhcCCh----hhccccccchHHHHHHHHHHHHHHHhhc--CCCCeEEEECCCCcHHHHHHHh
Confidence 344677788877 78888776643 3543222222211 1122223333333 4568999999999999999999
Q ss_pred hcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCCCCeeEEEecccccccChH---HHHHHHhhccc
Q psy2408 109 AKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDNDSFDGGWFFESIFHMNHS---AALNEARRVLK 183 (298)
Q Consensus 109 ~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~Lk 183 (298)
.|++|+|+|+|+.+++.|+..+...+.. ++++.++++.++ ++++++||+|+|+.+++|++++ ..+..+.+.|+
T Consensus 87 -~ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~ 164 (569)
T 4azs_A 87 -KGATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLA 164 (569)
T ss_dssp -TTCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhc
Confidence 6999999999999999999999877642 599999999887 4557899999999999999988 55667788888
Q ss_pred CCcEEEEEeCCC
Q psy2408 184 SGSILTLTDLPL 195 (298)
Q Consensus 184 pgG~l~i~~~~~ 195 (298)
++|..++.....
T Consensus 165 ~~~~~~~~~~~~ 176 (569)
T 4azs_A 165 DVTQAVILELAV 176 (569)
T ss_dssp HHSSEEEEECCC
T ss_pred cccceeeEEecc
Confidence 888777765543
No 155
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.67 E-value=6.1e-16 Score=134.92 Aligned_cols=156 Identities=21% Similarity=0.274 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHhCC--CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC
Q psy2408 70 AQGSDKLSRIMINKTS--ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA 147 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~ 147 (298)
......+.+.+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++. ++++++|+
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~ 289 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDV 289 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECST
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcch
Confidence 3455666666665542 346789999999999999999995 789999999999999999999988764 89999999
Q ss_pred CCCCCCCCCeeEEEecccccc-----cChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcc
Q psy2408 148 LNLPFDNDSFDGGWFFESIFH-----MNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVE 221 (298)
Q Consensus 148 ~~~~~~~~~fD~V~~~~~l~~-----~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (298)
.+.+.++++||+|+++..+++ .... .+++++.++|+|||.+++........ .......+.
T Consensus 290 ~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~---~~~l~~~f~----------- 355 (381)
T 3dmg_A 290 DEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY---EPLLEEKFG----------- 355 (381)
T ss_dssp TTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH---HHHHHHHHS-----------
T ss_pred hhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh---HHHHHHhhc-----------
Confidence 988666689999999988887 3334 99999999999999999976543210 011111111
Q ss_pred hHHHHHHhCCCcEEEEEeCCCC
Q psy2408 222 HYPDLLNKSGFELIKIDDITSH 243 (298)
Q Consensus 222 ~~~~~l~~~Gf~~~~~~~~~~~ 243 (298)
.+..+ +..||.+........+
T Consensus 356 ~v~~l-~~~gF~Vl~a~~~~~~ 376 (381)
T 3dmg_A 356 AFQTL-KVAEYKVLFAEKRGRH 376 (381)
T ss_dssp CCEEE-EESSSEEEEEECC---
T ss_pred cEEEE-eCCCEEEEEEEEeccc
Confidence 12223 7789999887765544
No 156
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.67 E-value=5e-16 Score=126.79 Aligned_cols=112 Identities=20% Similarity=0.229 Sum_probs=96.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+...+++.+.+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++...+ ++.++++|+.+...+
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccccc
Confidence 456677788888888999999999999999999985 5899999999999999999987654 699999999873224
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++||+|++..+++++.+ ++.++|+|||++++....
T Consensus 132 ~~~fD~v~~~~~~~~~~~-----~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLC-----KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GCCEEEEEESSBBSSCCH-----HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHHHHHH-----HHHHHcCCCcEEEEEEcC
Confidence 578999999999998875 688999999999998654
No 157
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=2.5e-16 Score=128.74 Aligned_cols=108 Identities=15% Similarity=0.223 Sum_probs=92.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C-CCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P-FDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~~~fD~V~~~ 163 (298)
.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.|++++...++.++++++++|+.+. + ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 467899999999999999999853 6899999999999999999999999877899999999775 3 236899999975
Q ss_pred ccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 164 ESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 164 ~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
.. .... .+++++.++|+|||++++.+..+.+
T Consensus 150 ~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g 181 (232)
T 3ntv_A 150 AA---KAQSKKFFEIYTPLLKHQGLVITDNVLYHG 181 (232)
T ss_dssp TT---SSSHHHHHHHHGGGEEEEEEEEEECTTGGG
T ss_pred Cc---HHHHHHHHHHHHHhcCCCeEEEEeeCCcCc
Confidence 43 3445 8999999999999999997766544
No 158
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.67 E-value=4.4e-16 Score=133.18 Aligned_cols=115 Identities=18% Similarity=0.195 Sum_probs=99.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
......+++.+.+.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++...+++ ++.++++|+.+.+
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhcc
Confidence 4567778888888899999999999999999999863 246999999999999999999988875 4999999998854
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.+.++||+|++..++++++ +++.++|+|||++++....
T Consensus 140 ~~~~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 PEFSPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GGGCCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred ccCCCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEEECC
Confidence 4567899999999999987 4678899999999998654
No 159
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=8.8e-16 Score=123.90 Aligned_cols=115 Identities=20% Similarity=0.140 Sum_probs=97.5
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG--CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
......+++.+.+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...+++ ++.+..+|+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCC
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCC
Confidence 44566777777888999999999999999999998754 79999999999999999999887764 5999999985532
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
...++||+|++..+++++++ ++.++|+|||++++....
T Consensus 142 ~~~~~fD~v~~~~~~~~~~~-----~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIPE-----PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGGCCEEEEEESSBBSSCCH-----HHHHTEEEEEEEEEEESS
T ss_pred CCCCCeeEEEECCchHHHHH-----HHHHHcCCCcEEEEEECC
Confidence 22578999999999998874 789999999999998654
No 160
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.66 E-value=9.7e-16 Score=133.53 Aligned_cols=119 Identities=18% Similarity=0.237 Sum_probs=98.2
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCC--ceEEEECCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLD--KVNFLHGDALNLP 151 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~--~i~~~~~d~~~~~ 151 (298)
...+.+++.+...++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.+++++...++.. +++++..|+.+ +
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~ 287 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G 287 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c
Confidence 345566788877777899999999999999999974 7899999999999999999999887653 57889999988 4
Q ss_pred CCCCCeeEEEecccccccC---h-H--HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMN---H-S--AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~---~-~--~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|+++..+++.. + . .+++++.++|+|||++++....
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 5678999999998887532 2 1 7899999999999999997544
No 161
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.66 E-value=7.2e-16 Score=128.79 Aligned_cols=150 Identities=21% Similarity=0.241 Sum_probs=107.6
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
...+...+...+. .++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.+++.. .++.+..+|+..++
T Consensus 71 ~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 71 RDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLP 143 (269)
T ss_dssp HHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCS
T ss_pred HHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCC
Confidence 3444444444442 467899999999999999999864 789999999999999998774 35889999999988
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
+++++||+|++..+. .+++++.++|+|||++++..+.... ...+.... ......... ..+..+|
T Consensus 144 ~~~~~fD~v~~~~~~------~~l~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~-~~~~~~~~~--~~~~~~g 207 (269)
T 1p91_A 144 FSDTSMDAIIRIYAP------CKAEELARVVKPGGWVITATPGPRH-------LMELKGLI-YNEVHLHAP--HAEQLEG 207 (269)
T ss_dssp BCTTCEEEEEEESCC------CCHHHHHHHEEEEEEEEEEEECTTT-------THHHHTTT-CSSCCCCCC--CCCCCTT
T ss_pred CCCCceeEEEEeCCh------hhHHHHHHhcCCCcEEEEEEcCHHH-------HHHHHHHh-hcccccccc--hhhHhcC
Confidence 888899999986653 3688999999999999998766422 11111111 111111111 2446789
Q ss_pred CcEEEEEeCCCCcc
Q psy2408 232 FELIKIDDITSHVM 245 (298)
Q Consensus 232 f~~~~~~~~~~~~~ 245 (298)
|++++...+.....
T Consensus 208 f~~~~~~~~~~~~~ 221 (269)
T 1p91_A 208 FTLQQSAELCYPMR 221 (269)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred CcEEEEEEEEEEEE
Confidence 99998877665543
No 162
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.66 E-value=4.8e-16 Score=139.48 Aligned_cols=117 Identities=17% Similarity=0.241 Sum_probs=99.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
...+.+.+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++.+|+.++++
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~ 221 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL 221 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc
Confidence 3455666777776667889999999999999999885456999999998 999999999999988889999999998776
Q ss_pred CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 153 DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
+ ++||+|++..+++++... ..+.++.++|+|||.+++.
T Consensus 222 ~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 222 P-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp S-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred C-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5 689999998887777543 7888999999999999853
No 163
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.66 E-value=8.3e-16 Score=129.17 Aligned_cols=114 Identities=19% Similarity=0.250 Sum_probs=99.2
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhc-C-CCCceEEEECCCCCCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAE-G-LLDKVNFLHGDALNLP 151 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~-~-~~~~i~~~~~d~~~~~ 151 (298)
....++..+.+.++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.|++++... + +..++.++++|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 44567777888899999999999999999999863 579999999999999999998876 4 4467999999998887
Q ss_pred CCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|++ +++++ .+++++.++|+|||++++..+.
T Consensus 167 ~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 77789999987 45677 9999999999999999998765
No 164
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.66 E-value=1.6e-15 Score=121.89 Aligned_cols=124 Identities=18% Similarity=0.153 Sum_probs=100.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC-CeeEEEecc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND-SFDGGWFFE 164 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fD~V~~~~ 164 (298)
+++.+|||||||+|.++..++... ..+|+++|+++.+++.|++++...++.+++++..+|..+ +++.+ +||+|+...
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcC
Confidence 578899999999999999999963 458999999999999999999999998889999999865 22333 699998755
Q ss_pred cccccChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 165 SIFHMNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 165 ~l~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
+.- +. .++......|+|+|++++.... ..+.++.+|.+.||.+++..
T Consensus 93 ~Gg---~~i~~Il~~~~~~L~~~~~lVlq~~~------------------------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 93 MGG---RLIARILEEGLGKLANVERLILQPNN------------------------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp ECH---HHHHHHHHHTGGGCTTCCEEEEEESS------------------------CHHHHHHHHHHTTEEEEEEE
T ss_pred CCh---HHHHHHHHHHHHHhCCCCEEEEECCC------------------------CHHHHHHHHHHCCCEEEEEE
Confidence 421 22 8999999999999999986432 13467788999999888654
No 165
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.66 E-value=2.6e-15 Score=123.81 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=97.9
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDS 156 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 156 (298)
...++..+.+.++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....++..++++...|+.+...++++
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 346677778889999999999999999999996 8899999999999999999999888867899999999885435678
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
||+|++ +.+++ .+++++.++|+|||++++....
T Consensus 159 ~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 159 FHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp BSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999987 45677 9999999999999999998754
No 166
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.66 E-value=1.5e-15 Score=123.22 Aligned_cols=131 Identities=16% Similarity=0.099 Sum_probs=104.0
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
.+.+.+ +++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...++.+++++..+|..+...+.++|
T Consensus 14 ~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~ 91 (244)
T 3gnl_A 14 KVASYI--TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAI 91 (244)
T ss_dssp HHHTTC--CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHhC--CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccc
Confidence 344444 578899999999999999999963 34899999999999999999999999888999999998754333469
Q ss_pred eEEEecccccccChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 158 DGGWFFESIFHMNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 158 D~V~~~~~l~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
|+|++..+.- +. .++....+.|+++|+|+++... ..+.++.+|.+.||.++
T Consensus 92 D~IviagmGg---~lI~~IL~~~~~~L~~~~~lIlq~~~------------------------~~~~lr~~L~~~Gf~i~ 144 (244)
T 3gnl_A 92 DTIVIAGMGG---TLIRTILEEGAAKLAGVTKLILQPNI------------------------AAWQLREWSEQNNWLIT 144 (244)
T ss_dssp CEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHHTEEEE
T ss_pred cEEEEeCCch---HHHHHHHHHHHHHhCCCCEEEEEcCC------------------------ChHHHHHHHHHCCCEEE
Confidence 9998744322 22 8899999999999999997532 13467788888899875
Q ss_pred EEE
Q psy2408 236 KID 238 (298)
Q Consensus 236 ~~~ 238 (298)
+..
T Consensus 145 ~E~ 147 (244)
T 3gnl_A 145 SEA 147 (244)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 167
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=1.1e-15 Score=127.21 Aligned_cols=104 Identities=21% Similarity=0.200 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCCCH----HHHHHHHhc-----CCeEEEEeCCHHHHHHHHHHHHh-----------------------cC
Q psy2408 88 KGQRFIDIGCGFGL----SGIRLAKAK-----GCRVDGITISKFQQESAMKTAKA-----------------------EG 135 (298)
Q Consensus 88 ~~~~vLDiGcG~G~----~~~~l~~~~-----~~~v~~vD~s~~~l~~a~~~~~~-----------------------~~ 135 (298)
++.+|||+|||+|. +++.+++.. +.+|+|+|+|+.+++.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 566666642 25899999999999999986410 00
Q ss_pred -------CCCceEEEECCCCCCCCC-CCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 136 -------LLDKVNFLHGDALNLPFD-NDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 136 -------~~~~i~~~~~d~~~~~~~-~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
+..++.|.+.|+.+.|++ .++||+|+|..++.|+.++ .+++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013689999999886554 5789999999999999876 9999999999999999884
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=5e-16 Score=128.16 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=94.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL- 150 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~- 150 (298)
..+...++.. .++.+|||||||+|..+..+++.. +.+|+++|+|+.+++.|++++...++.++++++++|+.+.
T Consensus 52 ~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 52 GQFLALLVRL---TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL 128 (248)
T ss_dssp HHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHhh---cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3444444333 467899999999999999999864 5799999999999999999999999888899999998763
Q ss_pred CCC--CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 151 PFD--NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 151 ~~~--~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
+.. .++||+|++... ..+. .+++++.++|+|||+|++.+..+.
T Consensus 129 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp HTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred HhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 322 348999998552 3344 899999999999999999877654
No 169
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=6.5e-16 Score=123.89 Aligned_cols=99 Identities=17% Similarity=0.226 Sum_probs=86.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
++.+|||+|||+|..+..++... +.+++++|+|+.+++.+++++...++.. ++++++|+.+++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP-SEPPFDGVISRA-- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC-CCSCEEEEECSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC-ccCCcCEEEEec--
Confidence 47899999999999999999863 6799999999999999999999888754 999999998875 457899999754
Q ss_pred cccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 167 FHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 167 ~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+.+. .+++++.++|+|||++++..
T Consensus 141 --~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 --FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp --SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred --cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3556 99999999999999999873
No 170
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.65 E-value=6e-15 Score=120.04 Aligned_cols=147 Identities=14% Similarity=0.125 Sum_probs=104.6
Q ss_pred HHHHH---HHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 76 LSRIM---INKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 76 ~~~~l---~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
+...+ ++.+.+.++.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.+++.+... .++.++++|+.+.
T Consensus 58 ~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~ 134 (227)
T 1g8a_A 58 LGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKP 134 (227)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCG
T ss_pred HHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCc
Confidence 34555 444457788999999999999999999864 379999999999999999887654 5799999999873
Q ss_pred C---CCCCCeeEEEecccccccChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHH
Q psy2408 151 P---FDNDSFDGGWFFESIFHMNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPD 225 (298)
Q Consensus 151 ~---~~~~~fD~V~~~~~l~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (298)
. ...++||+|++... .++. .++.++.++|+|||++++.......... .. ... +...++..
T Consensus 135 ~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~-~~~----------~~~~~l~~ 199 (227)
T 1g8a_A 135 EEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVT-KE-PEQ----------VFREVERE 199 (227)
T ss_dssp GGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTT-SC-HHH----------HHHHHHHH
T ss_pred chhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCC-CC-hhh----------hhHHHHHH
Confidence 1 12368999997654 3334 5599999999999999997222111111 00 011 12345666
Q ss_pred HHHhCCCcEEEEEeCCC
Q psy2408 226 LLNKSGFELIKIDDITS 242 (298)
Q Consensus 226 ~l~~~Gf~~~~~~~~~~ 242 (298)
+ .++ |++++...+..
T Consensus 200 l-~~~-f~~~~~~~~~~ 214 (227)
T 1g8a_A 200 L-SEY-FEVIERLNLEP 214 (227)
T ss_dssp H-HTT-SEEEEEEECTT
T ss_pred H-Hhh-ceeeeEeccCc
Confidence 5 777 99988777643
No 171
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=5.2e-17 Score=130.87 Aligned_cols=142 Identities=16% Similarity=0.133 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhCCC-CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 73 SDKLSRIMINKTSI-TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
...+.+.+++.+.. .++.+|||+|||+|..+..+++.. +.+++|+|+|+.+++.+++++...++ +++++++|+.+
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~- 90 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-
Confidence 45677777777765 678899999999999999999964 56999999999999999999887765 68888898877
Q ss_pred CCCC-----CCeeEEEecccccccC------h---------------------HHHHHHHhhcccCCcEEEEEeCCCCCC
Q psy2408 151 PFDN-----DSFDGGWFFESIFHMN------H---------------------SAALNEARRVLKSGSILTLTDLPLLSV 198 (298)
Q Consensus 151 ~~~~-----~~fD~V~~~~~l~~~~------~---------------------~~~l~~~~r~LkpgG~l~i~~~~~~~~ 198 (298)
++++ ++||+|+++..+.... . ..+++++.++|+|||++++.+...
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--- 167 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH--- 167 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---
Confidence 4444 8999999964432221 1 267788999999999955544431
Q ss_pred CCChhHHHHHHHhhcccCCCCcchHHHHHH--hCCCcEEEEEe
Q psy2408 199 SKNDNKFKEYVKKNIHSNFILVEHYPDLLN--KSGFELIKIDD 239 (298)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~Gf~~~~~~~ 239 (298)
...+.+..+++ ++||..+....
T Consensus 168 -------------------~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 168 -------------------NQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -------------------SCHHHHHHHTGGGGGGTEECCEEE
T ss_pred -------------------ccHHHHHHHHHHhhcCCceEEEEE
Confidence 12345667777 88887665443
No 172
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.65 E-value=1.2e-17 Score=137.43 Aligned_cols=138 Identities=20% Similarity=0.194 Sum_probs=108.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccc
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIF 167 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 167 (298)
++.+|||+|||+|..+..+++ .+.+|+|+|+|+.+++.+++++...++..++.++++|+.+++ ++++||+|++..+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFAL-TGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 678999999999999999998 478999999999999999999999888668999999998876 568999999999999
Q ss_pred ccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh--hcccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 168 HMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK--NIHSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 168 ~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
+..+. ..+.++.++|+|||.+++.... ..... ...+.....+++..++...|...+....
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~~~------------~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~ 218 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRLSK------------KITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNF 218 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHHHH------------HHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEE
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHHHH------------hhCCceEEECCCCCCHHHHHHHhccCCCEEEEehh
Confidence 88887 7888999999999986553211 11000 1123445566777777777765554433
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.65 E-value=5.8e-16 Score=126.61 Aligned_cols=109 Identities=24% Similarity=0.312 Sum_probs=92.1
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-CCC--CCCeeEEE
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-PFD--NDSFDGGW 161 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~fD~V~ 161 (298)
..++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.|++++...++..++.++++|+.+. +.. +++||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3567899999999999999999875 6899999999999999999999988877899999999874 322 47899999
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+..... +. .+++++.++|+|||++++.+..+..
T Consensus 132 ~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~~g 165 (233)
T 2gpy_A 132 IDAAKG---QYRRFFDMYSPMVRPGGLILSDNVLFRG 165 (233)
T ss_dssp EEGGGS---CHHHHHHHHGGGEEEEEEEEEETTTC--
T ss_pred ECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCCcCC
Confidence 876643 55 9999999999999999998765443
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.64 E-value=2e-15 Score=123.55 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=95.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+...+++.+.+.++.+|||+|||+|.++..+++..+.+|+++|+++.+++.+++++...++. ++.++.+|+ ..+++
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~~~~ 154 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SKGFP 154 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GGCCG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-ccCCC
Confidence 3455667777778889999999999999999999865589999999999999999999988875 499999997 33444
Q ss_pred C-CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 N-DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~-~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
. .+||+|++..+++++.+ ++.++|+|||++++....
T Consensus 155 ~~~~fD~Ii~~~~~~~~~~-----~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIPE-----PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GGCCEEEEEECSBBSSCCH-----HHHHTEEEEEEEEEEECS
T ss_pred CCCCccEEEECCcHHHHHH-----HHHHhcCCCcEEEEEEec
Confidence 3 35999999999988775 688999999999998654
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.64 E-value=1.3e-15 Score=129.99 Aligned_cols=141 Identities=18% Similarity=0.137 Sum_probs=106.3
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...++. ++.++++|+..++...
T Consensus 107 s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 107 SMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELN 185 (315)
T ss_dssp HHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGC
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccccc
Confidence 3344455567889999999999999999999864 379999999999999999999988875 6999999998875445
Q ss_pred CCeeEEEec------ccccccCh----------------H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh
Q psy2408 155 DSFDGGWFF------ESIFHMNH----------------S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK 211 (298)
Q Consensus 155 ~~fD~V~~~------~~l~~~~~----------------~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 211 (298)
++||+|++. .++.+.++ . .+|+++.++|||||++++++........
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~En----------- 254 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEEN----------- 254 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGT-----------
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHh-----------
Confidence 789999973 23332221 2 7899999999999999998765332111
Q ss_pred hcccCCCCcchHHHHHHhCCCcEEEE
Q psy2408 212 NIHSNFILVEHYPDLLNKSGFELIKI 237 (298)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~Gf~~~~~ 237 (298)
...+...+++.||+++..
T Consensus 255 --------e~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 255 --------EFVIQWALDNFDVELLPL 272 (315)
T ss_dssp --------HHHHHHHHHHSSEEEECC
T ss_pred --------HHHHHHHHhcCCCEEecC
Confidence 123456677788876643
No 176
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.64 E-value=4.6e-15 Score=128.80 Aligned_cols=120 Identities=23% Similarity=0.165 Sum_probs=101.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
..+...++..+.+.++.+|||+|||+|.++..++... +.+++|+|+|+.+++.|++++...++. ++++.++|+.+++
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~ 267 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCc
Confidence 4566777888888889999999999999999999864 379999999999999999999999987 8999999999987
Q ss_pred CCCCCeeEEEecccccc-------cCh-H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFH-------MNH-S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~-------~~~-~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.+.+.||+|+++-.... ... . .+++++.++|+|||++++....
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 66678999999644322 111 2 7899999999999999997543
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=1.4e-15 Score=126.28 Aligned_cols=113 Identities=17% Similarity=0.192 Sum_probs=93.0
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA---EGLLDKVNFLHGDALNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~---~~~~~~i~~~~~d~~~~----- 150 (298)
+...+...++.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|++++.. .++.+++.++++|+.++
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 4455666778899999999999999999875 57999999999999999999987 77777899999999887
Q ss_pred --CCCCCCeeEEEeccccccc------------------ChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 151 --PFDNDSFDGGWFFESIFHM------------------NHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 151 --~~~~~~fD~V~~~~~l~~~------------------~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
++++++||+|+++-.+... ... .+++.+.++|+|||++++..
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2557899999997333221 123 88999999999999998864
No 178
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.63 E-value=4e-15 Score=120.97 Aligned_cols=112 Identities=19% Similarity=0.219 Sum_probs=92.0
Q ss_pred HHHHHhCC--CCCCCeEEEeCCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEECCCCC
Q psy2408 78 RIMINKTS--ITKGQRFIDIGCGFGLSGIRLAKAKG--CRVDGITISKFQQESAMKTAKAEGL----LDKVNFLHGDALN 149 (298)
Q Consensus 78 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~l~~a~~~~~~~~~----~~~i~~~~~d~~~ 149 (298)
..+++.+. +.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...++ ..++.++++|+..
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 34455554 67889999999999999999998654 6999999999999999999887653 3479999999987
Q ss_pred CCCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 150 LPFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 150 ~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.+.+.++||+|++..+++++. +++.++|+|||++++....
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~-----~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP-----QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred CcccCCCcCEEEECCchHHHH-----HHHHHhcCCCcEEEEEEec
Confidence 654567899999988887654 4788999999999997654
No 179
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.63 E-value=2.4e-15 Score=124.30 Aligned_cols=121 Identities=15% Similarity=0.074 Sum_probs=93.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHhc---CCCCc--------
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA--K-GCRVDGITISKFQQESAMKTAKAE---GLLDK-------- 139 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~~v~~vD~s~~~l~~a~~~~~~~---~~~~~-------- 139 (298)
..+...+++.+...++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++.|++++... ++..+
T Consensus 37 ~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 37 TEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 456677777765556789999999999999999885 2 569999999999999999887654 33222
Q ss_pred -----------------eE-------------EEECCCCCCCC-----CCCCeeEEEecccccccCh---------H-HH
Q psy2408 140 -----------------VN-------------FLHGDALNLPF-----DNDSFDGGWFFESIFHMNH---------S-AA 174 (298)
Q Consensus 140 -----------------i~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~l~~~~~---------~-~~ 174 (298)
++ ++++|+.+... +.++||+|+++..+.+... . .+
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGL 196 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHH
Confidence 56 99999887421 3458999999866554432 2 89
Q ss_pred HHHHhhcccCCcEEEEEeCC
Q psy2408 175 LNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 175 l~~~~r~LkpgG~l~i~~~~ 194 (298)
++++.++|+|||++++....
T Consensus 197 l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 197 LRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEeCcc
Confidence 99999999999999996544
No 180
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.63 E-value=2.5e-15 Score=122.78 Aligned_cols=106 Identities=23% Similarity=0.360 Sum_probs=84.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh------cCCCCceEEEECCCCC-CC--CCCCC
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA------EGLLDKVNFLHGDALN-LP--FDNDS 156 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~------~~~~~~i~~~~~d~~~-~~--~~~~~ 156 (298)
.++.+|||||||+|.++..+++.. +..|+|+|+|+.|++.|++++.. .++ .++.++++|+.+ ++ +++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 466799999999999999999864 67999999999999999988753 233 579999999987 55 67889
Q ss_pred eeEEEecccccccCh---------HHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNH---------SAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~---------~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
||.|++...-.+... +.+++++.++|+|||.|++...
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999987544332221 2699999999999999998753
No 181
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.62 E-value=2.9e-16 Score=121.90 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=85.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C-C--CCCCeeEEEec
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P-F--DNDSFDGGWFF 163 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~--~~~~fD~V~~~ 163 (298)
++.+|||+|||+|..+..+++. +..++|+|+|+.+++.+++++...++ +++++++|+.+. + . ..++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999984 66799999999999999999988776 689999998763 2 1 12489999998
Q ss_pred ccccccChH-HHHHHHh--hcccCCcEEEEEeCCC
Q psy2408 164 ESIFHMNHS-AALNEAR--RVLKSGSILTLTDLPL 195 (298)
Q Consensus 164 ~~l~~~~~~-~~l~~~~--r~LkpgG~l~i~~~~~ 195 (298)
..++ ... .+++.+. ++|+|||.+++.....
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 7765 344 6666666 9999999999977653
No 182
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.62 E-value=1.2e-15 Score=123.89 Aligned_cols=119 Identities=20% Similarity=0.255 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
...++...++.. .++.+|||+|||+|..+..+++.. +++|+++|+++.+++.+++++...++.++++++++|+.+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 45 TQGKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444433 467899999999999999999974 679999999999999999999999988789999999865
Q ss_pred C-C-CC---CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 150 L-P-FD---NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 150 ~-~-~~---~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
. + ++ .++||+|++... .... .+++++.++|+|||.+++.+..+.
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 3 1 11 157999997654 2344 899999999999999998876654
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.61 E-value=2.7e-15 Score=120.68 Aligned_cols=117 Identities=21% Similarity=0.253 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
...+...++.. .++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.|++++...++.++++++++|+.+.
T Consensus 44 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 44 TGRLLYLLARI---KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI 120 (210)
T ss_dssp HHHHHHHHHHH---HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH
Confidence 34444444443 356799999999999999999864 6799999999999999999999888777899999998764
Q ss_pred -CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 151 -PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 151 -~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
+..++ ||+|++... ..+. .+++++.++|+|||++++.+..+.
T Consensus 121 ~~~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 121 AAGQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp HTTCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred hccCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 43346 999998632 3445 999999999999999999776544
No 184
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.61 E-value=4.1e-15 Score=124.94 Aligned_cols=116 Identities=22% Similarity=0.245 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
.+.+++.+++.+...++.+|||+|||+|.++..++...+++|+|+|+|+.+++.|++++...++.++++++++|+.+. +
T Consensus 108 te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~ 186 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-F 186 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-G
T ss_pred HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-c
Confidence 345566666655434667999999999999999998646799999999999999999999998877799999999873 3
Q ss_pred CCCCe---eEEEec------------ccccccC--------hH-HHHHHHh-hcccCCcEEEEE
Q psy2408 153 DNDSF---DGGWFF------------ESIFHMN--------HS-AALNEAR-RVLKSGSILTLT 191 (298)
Q Consensus 153 ~~~~f---D~V~~~------------~~l~~~~--------~~-~~l~~~~-r~LkpgG~l~i~ 191 (298)
+ ++| |+|+++ .+. |-+ +. .+++++. +.|+|||++++.
T Consensus 187 ~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 187 K-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp G-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred c-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 3 578 999996 222 322 23 7899999 999999999984
No 185
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.61 E-value=3.8e-15 Score=128.73 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=96.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
...+.+++.+...++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++...++. +.++.+|+...+
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--
Confidence 345666777765667899999999999999999864 469999999999999999999887764 677899987653
Q ss_pred CCCeeEEEeccccccc-----ChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHM-----NHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~-----~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++||+|+++.++++. .+. .+++++.++|+|||.+++....
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 5799999999888752 233 9999999999999999997654
No 186
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.61 E-value=1.9e-15 Score=128.33 Aligned_cols=136 Identities=16% Similarity=0.124 Sum_probs=100.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCCCC--CCCCeeEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA---EGLLDKVNFLHGDALNLPF--DNDSFDGG 160 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~---~~~~~~i~~~~~d~~~~~~--~~~~fD~V 160 (298)
+++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++.+.. ....++++++.+|+.+++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999999999999999864 46999999999999999998742 1223579999999877532 46899999
Q ss_pred EecccccccCh-----HHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 161 WFFESIFHMNH-----SAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 161 ~~~~~l~~~~~-----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
++.....+.+. ..+++++.++|+|||++++...+... . ......+.+.++++||..+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~----------------~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--D----------------LELIEKMSRFIRETGFASV 235 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT--C----------------HHHHHHHHHHHHHHTCSEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--c----------------hHHHHHHHHHHHhCCCCcE
Confidence 99765544332 28899999999999999997543110 0 0123467788899999877
Q ss_pred EEEeC
Q psy2408 236 KIDDI 240 (298)
Q Consensus 236 ~~~~~ 240 (298)
.....
T Consensus 236 ~~~~~ 240 (304)
T 3bwc_A 236 QYALM 240 (304)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76543
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.60 E-value=1.8e-16 Score=130.26 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 71 QGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
.....+...++.. .++.+|||||||+|..+..+++.. +++|+++|+++.+++.|++++...++.++++++++|+.
T Consensus 46 ~~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 122 (242)
T 3r3h_A 46 PEQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL 122 (242)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444555555543 356799999999999999999864 57999999999999999999999998889999999987
Q ss_pred CC-CCC-----CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 149 NL-PFD-----NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 149 ~~-~~~-----~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+. +.. .++||+|++... ..+. .+++++.++|+|||++++.+..+.+
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 64 211 478999988654 3344 8999999999999999998877654
No 188
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.60 E-value=7.9e-15 Score=128.00 Aligned_cols=140 Identities=26% Similarity=0.253 Sum_probs=107.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
..+...++... ..++.+|||+|||+|.++..++.... ++++|+|+|+.+++.|++++...++.++++++++|+.++++
T Consensus 204 ~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~ 282 (373)
T 3tm4_A 204 ASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ 282 (373)
T ss_dssp HHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG
T ss_pred HHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc
Confidence 34455555555 67889999999999999999998532 39999999999999999999999987789999999999887
Q ss_pred CCCCeeEEEecccccc-------cChH--HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchH
Q psy2408 153 DNDSFDGGWFFESIFH-------MNHS--AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHY 223 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~-------~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
++++||+|+++-.+.. +.+. .+++++.++| +|.+++.... .+.+
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-------------------------~~~~ 335 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-------------------------KKAI 335 (373)
T ss_dssp TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-------------------------HHHH
T ss_pred ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-------------------------HHHH
Confidence 7789999999654322 2222 7888999988 5555554322 2456
Q ss_pred HHHHHhCCCcEEEEEeCC
Q psy2408 224 PDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 224 ~~~l~~~Gf~~~~~~~~~ 241 (298)
.+.+++.||.+.....+.
T Consensus 336 ~~~~~~~G~~~~~~~~~~ 353 (373)
T 3tm4_A 336 EEAIAENGFEIIHHRVIG 353 (373)
T ss_dssp HHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHcCCEEEEEEEEE
Confidence 678888999887765543
No 189
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.60 E-value=9.1e-16 Score=124.71 Aligned_cols=119 Identities=16% Similarity=0.201 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
...+...++.. .++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...++.++++++++|+.+.
T Consensus 52 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 52 QAQLLALLVKL---MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHh---hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH
Confidence 34444444443 366799999999999999999863 6799999999999999999999999887899999998653
Q ss_pred -C-CC----CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 151 -P-FD----NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 151 -~-~~----~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+ +. .++||+|++... ..+. .+++++.++|+|||++++.+..+.+
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 179 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLRRG 179 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSGGG
T ss_pred HHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCcCC
Confidence 1 11 178999996543 3345 8999999999999999998776543
No 190
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.60 E-value=3.9e-16 Score=130.20 Aligned_cols=153 Identities=12% Similarity=0.068 Sum_probs=98.5
Q ss_pred HHHHHhCCCC-CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEE-EECCCCCCC---C
Q psy2408 78 RIMINKTSIT-KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNF-LHGDALNLP---F 152 (298)
Q Consensus 78 ~~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~-~~~d~~~~~---~ 152 (298)
..+++.+.+. ++.+|||+|||||.++..+++....+|+|+|+|+.|++.+.+.- .++.. ...++..++ +
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~~l 147 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPVDF 147 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGGGC
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchhhC
Confidence 3455666554 57799999999999999998853359999999999998854321 12322 223443332 3
Q ss_pred CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHh--hcccCCCCcchHHHHHHhC
Q psy2408 153 DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKK--NIHSNFILVEHYPDLLNKS 230 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 230 (298)
+..+||+|++..+++++ ..+|.++.|+|+|||++++...+...... ..... ... -...+....+++.++++++
T Consensus 148 ~~~~fD~v~~d~sf~sl--~~vL~e~~rvLkpGG~lv~lvkPqfe~~~--~~~~~-~G~vrd~~~~~~~~~~v~~~~~~~ 222 (291)
T 3hp7_A 148 TEGLPSFASIDVSFISL--NLILPALAKILVDGGQVVALVKPQFEAGR--EQIGK-NGIVRESSIHEKVLETVTAFAVDY 222 (291)
T ss_dssp TTCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEECGGGTSCG--GGCC--CCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeeHhhH--HHHHHHHHHHcCcCCEEEEEECcccccCh--hhcCC-CCccCCHHHHHHHHHHHHHHHHHC
Confidence 44569999987766533 38999999999999999987322111110 00000 000 0001123567889999999
Q ss_pred CCcEEEEEeCC
Q psy2408 231 GFELIKIDDIT 241 (298)
Q Consensus 231 Gf~~~~~~~~~ 241 (298)
||.+......+
T Consensus 223 Gf~v~~~~~sp 233 (291)
T 3hp7_A 223 GFSVKGLDFSP 233 (291)
T ss_dssp TEEEEEEEECS
T ss_pred CCEEEEEEECC
Confidence 99988876543
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.60 E-value=4.9e-15 Score=120.53 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=91.9
Q ss_pred HHHHHhC--CCCCCCeEEEeCCCCCHHHHHHHHhcC------CeEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEEC
Q psy2408 78 RIMINKT--SITKGQRFIDIGCGFGLSGIRLAKAKG------CRVDGITISKFQQESAMKTAKAEGL----LDKVNFLHG 145 (298)
Q Consensus 78 ~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~l~~a~~~~~~~~~----~~~i~~~~~ 145 (298)
..+++.+ .+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.|++++...++ ..++.++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3444444 457889999999999999999998644 5999999999999999999988763 357999999
Q ss_pred CCCCCC----CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 146 DALNLP----FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 146 d~~~~~----~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
|+.... .+.++||+|++..+++++. +++.++|+|||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELP-----EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCC-----HHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHH-----HHHHHhcCCCcEEEEEEcc
Confidence 998754 4457899999998888654 5788999999999997553
No 192
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=128.57 Aligned_cols=101 Identities=25% Similarity=0.356 Sum_probs=85.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEec--
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFF-- 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~-- 163 (298)
.++.+|||||||+|.++..+++ .| .+|++||.|+ +++.|++.+..+++.++|.++.+|+.++.+| ++||+|++-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred cCCCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecc
Confidence 4788999999999999988887 55 4899999996 8999999999999999999999999998776 789999984
Q ss_pred -ccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 164 -ESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 164 -~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
..+.+-... .++....++|+|||.++-
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccchhhhHHHHHHhhCCCCceECC
Confidence 334444444 888888899999998874
No 193
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.60 E-value=4e-15 Score=127.53 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=87.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCC-ceEEEECCCCCCCC----CCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLD-KVNFLHGDALNLPF----DNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~fD~V~ 161 (298)
.++.+|||+|||+|.++..++. .+++|+++|+|+.+++.|++++...++.+ ++.++++|+.++.. ..++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~-~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999998 56799999999999999999999888865 59999999877521 146899999
Q ss_pred eccc----------ccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 162 FFES----------IFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 162 ~~~~----------l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.-. ..+..+. .+++++.++|+|||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 8432 2223345 8999999999999998776544
No 194
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.59 E-value=5.2e-15 Score=120.45 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=91.9
Q ss_pred HHHHHHHhC--CCCCCCeEEEeCCCCCHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHHHHHhcCC----CCceEE
Q psy2408 76 LSRIMINKT--SITKGQRFIDIGCGFGLSGIRLAKAKG-------CRVDGITISKFQQESAMKTAKAEGL----LDKVNF 142 (298)
Q Consensus 76 ~~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~~v~~vD~s~~~l~~a~~~~~~~~~----~~~i~~ 142 (298)
+...+++.+ .+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+. ..++.+
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 344555555 467889999999999999999998644 5999999999999999999876541 246999
Q ss_pred EECCCCCCCCCC-CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 143 LHGDALNLPFDN-DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 143 ~~~d~~~~~~~~-~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++|+.. +++. ++||+|++..+++++. +++.++|+|||++++....
T Consensus 150 ~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 150 VEGDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EESCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred EECCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCEEEEEEec
Confidence 9999987 4444 7899999999988766 5788999999999997654
No 195
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=1.8e-14 Score=119.63 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=105.9
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCe
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSF 157 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 157 (298)
..+.+.. .+|.+|||+|||+|.++..++....++|+++|+|+.+++.++++++.+++.+++.++++|+.+++ +.+.|
T Consensus 117 ~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~ 193 (278)
T 3k6r_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIA 193 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCE
T ss_pred HHHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCC
Confidence 3444554 68999999999999999999985457999999999999999999999999999999999999876 35789
Q ss_pred eEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEE
Q psy2408 158 DGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELI 235 (298)
Q Consensus 158 D~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 235 (298)
|.|++... +.. .++..+.++|+|||++.+.+........ -...+.+...+++.|+.+.
T Consensus 194 D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~----------------~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 194 DRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP----------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp EEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT----------------TTTHHHHHHHHHHTTCEEE
T ss_pred CEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeecccccc----------------hhHHHHHHHHHHHcCCcEE
Confidence 99986532 223 7888899999999999887655332221 0123456677888999764
No 196
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.58 E-value=2.2e-15 Score=124.09 Aligned_cols=120 Identities=17% Similarity=0.224 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 71 QGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
.....+...++.. .++.+|||||||+|..+..+++.. +.+|+++|+|+.+++.|++++...++.++++++.+|+.
T Consensus 65 ~~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 65 ADEGQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 3444555555544 356799999999999999999874 68999999999999999999999888778999999987
Q ss_pred CC-C-C-----CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 149 NL-P-F-----DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 149 ~~-~-~-----~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
+. + + +.++||+|++... ..+. .+++++.++|+|||++++.+..+.
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 194 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTLWN 194 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTTGG
T ss_pred HHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCCcC
Confidence 63 2 1 1478999998644 2345 999999999999999999776543
No 197
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.57 E-value=5.6e-15 Score=121.22 Aligned_cols=107 Identities=23% Similarity=0.220 Sum_probs=89.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C------------
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P------------ 151 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~------------ 151 (298)
.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++...++.+++.++++|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 467899999999999999999874 5799999999999999999999888876799999997652 1
Q ss_pred --CCC--CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 152 --FDN--DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 152 --~~~--~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
+++ ++||+|++... ..+. .+++++.++|+|||++++.+..+.
T Consensus 139 ~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp TTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred ccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 222 78999998754 2344 899999999999999999876544
No 198
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.57 E-value=6.9e-15 Score=123.64 Aligned_cols=113 Identities=19% Similarity=0.191 Sum_probs=90.1
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...+..++++++++|+.+++++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 456788888888888999999999999999999985 6799999999999999999987666556799999999987764
Q ss_pred CCCeeEEEecccccccChH--HHH--------------HHH--hhcccCCcEEE
Q psy2408 154 NDSFDGGWFFESIFHMNHS--AAL--------------NEA--RRVLKSGSILT 189 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~--~~l--------------~~~--~r~LkpgG~l~ 189 (298)
+||+|+++...+...+. .++ +++ +++++|||.++
T Consensus 93 --~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 --FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp --CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred --hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999986544332222 333 233 36899999763
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=6.3e-15 Score=120.36 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=94.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
...+...++.. .++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.|++.+...++.++++++.+|+.+.
T Consensus 60 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 60 QAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp HHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34444444443 356799999999999999999864 5799999999999999999999888877899999997542
Q ss_pred ----CCCC--CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 151 ----PFDN--DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 151 ----~~~~--~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+..+ ++||+|++... ..+. .+++++.++|+|||++++.+..+.+
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g 187 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLWHG 187 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTGGG
T ss_pred HHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCcCC
Confidence 2223 78999997654 2344 8999999999999999998776543
No 200
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.56 E-value=2.5e-14 Score=117.84 Aligned_cols=105 Identities=30% Similarity=0.413 Sum_probs=84.4
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--------CCCCceEEEECCCCC-CC--CCC
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAE--------GLLDKVNFLHGDALN-LP--FDN 154 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~--------~~~~~i~~~~~d~~~-~~--~~~ 154 (298)
.++.+|||||||+|.++..+++.. +..|+|+|+|+.+++.+++++... ++ .++.++++|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 467899999999999999999864 468999999999999999988765 55 479999999987 44 667
Q ss_pred CCeeEEEecccccccCh---------HHHHHHHhhcccCCcEEEEEe
Q psy2408 155 DSFDGGWFFESIFHMNH---------SAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~---------~~~l~~~~r~LkpgG~l~i~~ 192 (298)
+++|.|++...-.+... ..+++++.++|+|||.|++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 89999985432211110 269999999999999999954
No 201
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.56 E-value=6.6e-14 Score=125.12 Aligned_cols=119 Identities=19% Similarity=0.206 Sum_probs=96.5
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--C
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-G-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--F 152 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~ 152 (298)
...+...+.+.++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.+++++...++. ++.++++|+..++ +
T Consensus 248 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 248 SAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSS
T ss_pred hHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhh
Confidence 3444455567889999999999999999999864 3 69999999999999999999988874 6999999998875 5
Q ss_pred CCCCeeEEEe------cccccccCh-----------------HHHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 153 DNDSFDGGWF------FESIFHMNH-----------------SAALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 153 ~~~~fD~V~~------~~~l~~~~~-----------------~~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
++++||+|++ ..++.+.++ ..++.++.++|||||++++++....
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 5578999996 334443333 1689999999999999999877644
No 202
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.56 E-value=1.1e-15 Score=124.51 Aligned_cols=151 Identities=12% Similarity=0.078 Sum_probs=91.6
Q ss_pred HHHHHhCCCC-CCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEE-CCCCCCCC
Q psy2408 78 RIMINKTSIT-KGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLL--DKVNFLH-GDALNLPF 152 (298)
Q Consensus 78 ~~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~--~~i~~~~-~d~~~~~~ 152 (298)
..+++.+.+. ++.+|||||||+|.++..+++. + .+|+|+|+|+.|++.++++....... .++.+.. .|+....+
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRP 104 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCC
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCC
Confidence 3445555544 4679999999999999999985 5 49999999999999877653221100 0122222 22221111
Q ss_pred CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhh----cccCCCCcchHHHHHH
Q psy2408 153 DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKN----IHSNFILVEHYPDLLN 228 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 228 (298)
...+||+++++ + ..+++++.|+|+|||++++....... .......... ...+..+.+++.++++
T Consensus 105 d~~~~D~v~~~-----l--~~~l~~i~rvLkpgG~lv~~~~p~~e-----~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~ 172 (232)
T 3opn_A 105 SFTSIDVSFIS-----L--DLILPPLYEILEKNGEVAALIKPQFE-----AGREQVGKNGIIRDPKVHQMTIEKVLKTAT 172 (232)
T ss_dssp SEEEECCSSSC-----G--GGTHHHHHHHSCTTCEEEEEECHHHH-----SCHHHHC-CCCCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEhhh-----H--HHHHHHHHHhccCCCEEEEEECcccc-----cCHHHhCcCCeecCcchhHHHHHHHHHHHH
Confidence 22345544432 2 37999999999999999986411000 0001110000 0112236788999999
Q ss_pred hCCCcEEEEEeCC
Q psy2408 229 KSGFELIKIDDIT 241 (298)
Q Consensus 229 ~~Gf~~~~~~~~~ 241 (298)
++||+++.....+
T Consensus 173 ~aGf~v~~~~~~p 185 (232)
T 3opn_A 173 QLGFSVKGLTFSP 185 (232)
T ss_dssp HHTEEEEEEEECS
T ss_pred HCCCEEEEEEEcc
Confidence 9999998876543
No 203
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.56 E-value=8.7e-15 Score=126.01 Aligned_cols=107 Identities=16% Similarity=0.182 Sum_probs=84.8
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCC------CCHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCG------FGLSGIRLAKA--KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA 147 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~--~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~ 147 (298)
..+.++..+. .++.+||||||| +|..+..+++. .+++|+|+|+|+.|.. ...+++++++|+
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa 273 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecc
Confidence 3445566554 356799999999 77777777765 3789999999998721 125799999999
Q ss_pred CCCCCC------CCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 148 LNLPFD------NDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 148 ~~~~~~------~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.++++. +++||+|++.. .+++.+. .+|++++++|||||++++.+..
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 998766 68999999864 4566666 9999999999999999998766
No 204
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.55 E-value=3.5e-15 Score=122.08 Aligned_cols=107 Identities=15% Similarity=0.200 Sum_probs=83.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh-----cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA-----KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-----~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
.....++... ++.+|||||||+|..+..+++. .+++|+++|+|+.+++.|+ ++..+++++++|+.+
T Consensus 71 ~~l~~~l~~~---~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~ 141 (236)
T 2bm8_A 71 AVYHDMLWEL---RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSD 141 (236)
T ss_dssp HHHHHHHHHH---CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSC
T ss_pred HHHHHHHHhc---CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchh
Confidence 3344444443 4579999999999999999985 2689999999999998886 123579999999988
Q ss_pred C---CCCC-CCeeEEEecccccccChH-HHHHHHhh-cccCCcEEEEEeC
Q psy2408 150 L---PFDN-DSFDGGWFFESIFHMNHS-AALNEARR-VLKSGSILTLTDL 193 (298)
Q Consensus 150 ~---~~~~-~~fD~V~~~~~l~~~~~~-~~l~~~~r-~LkpgG~l~i~~~ 193 (298)
. +... .+||+|++... |. +. .++.++.+ +|+|||++++.+.
T Consensus 142 ~~~l~~~~~~~fD~I~~d~~--~~-~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 142 LTTFEHLREMAHPLIFIDNA--HA-NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SGGGGGGSSSCSSEEEEESS--CS-SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHHHhhccCCCCEEEECCc--hH-hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4 4333 47999997654 33 55 99999997 9999999999765
No 205
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.55 E-value=3.3e-14 Score=118.95 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=93.5
Q ss_pred HHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC----CC
Q psy2408 81 INKTSITKGQRFIDIGCGFGLSGIRLAKAK-G-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF----DN 154 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~ 154 (298)
...+.+.++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.+++++...++. ++.++++|+.+++. +.
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTT
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhcc
Confidence 344466789999999999999999999863 4 79999999999999999999988875 79999999987643 25
Q ss_pred CCeeEEEeccc------cc------------ccChH-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 155 DSFDGGWFFES------IF------------HMNHS-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 155 ~~fD~V~~~~~------l~------------~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
++||+|++... +. ..... .+++++.++|||||++++++.....
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 78999998622 21 11344 8999999999999999998766433
No 206
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.55 E-value=1.4e-14 Score=112.87 Aligned_cols=104 Identities=15% Similarity=0.114 Sum_probs=85.1
Q ss_pred HHHHhCC-CCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----
Q psy2408 79 IMINKTS-ITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---- 151 (298)
Q Consensus 79 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 151 (298)
.+++.+. +.++.+|||+|||+|..+..+++.. +.+++++|+|+ +++. .++.++++|+.+.+
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHH
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhh
Confidence 3344443 5788899999999999999999874 47999999998 6532 36899999998875
Q ss_pred ----CCCCCeeEEEecccccccChH------------HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 ----FDNDSFDGGWFFESIFHMNHS------------AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ----~~~~~fD~V~~~~~l~~~~~~------------~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|++..++++.... .+++++.++|+|||.+++..+.
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 667899999998888776542 7899999999999999997765
No 207
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.54 E-value=8.3e-15 Score=119.34 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=89.3
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCC----CCee
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDN----DSFD 158 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~----~~fD 158 (298)
.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.+++.+...++..+++++++|+.+. .++. ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 467799999999999999999863 5799999999999999999999988877899999998653 1111 6899
Q ss_pred EEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 159 GGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 159 ~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
+|++... .... .+++++.++|+|||.+++.+..+.
T Consensus 148 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 183 (229)
T 2avd_A 148 VAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVLWR 183 (229)
T ss_dssp EEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCCcC
Confidence 9998654 2344 899999999999999999876543
No 208
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3.9e-14 Score=118.34 Aligned_cols=105 Identities=17% Similarity=0.097 Sum_probs=90.8
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE 164 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~ 164 (298)
+.++.+|||+|||+|.++..+++.. +++|+++|+|+.+++.|++++...++. ++.++++|+.+++. .++||+|++..
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEECC
Confidence 5688999999999999999999964 469999999999999999999988875 58899999988743 57899999875
Q ss_pred cccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 165 SIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 165 ~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
.. .. .++.++.+.|+|||.+++.+....
T Consensus 195 p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 195 VH----KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp CS----SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cc----cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 53 44 899999999999999999887643
No 209
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.54 E-value=1.7e-13 Score=109.73 Aligned_cols=129 Identities=12% Similarity=0.050 Sum_probs=98.4
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE 164 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~ 164 (298)
...++.+|||+|||+|.++..+++....+++|+|+|+.+++.+++++...++ ++.++++|+.+++ ++||+|+++.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 4557889999999999999999985334799999999999999999887776 6999999998874 4899999988
Q ss_pred cccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 165 SIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 165 ~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
.++..... .+++++.+++ |+ +++..... .. +.+.+.+.+++.||.+..+....
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~------~~---------------~~~~~~~~l~~~g~~~~~~~~~~ 176 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DV-VYSIHLAK------PE---------------VRRFIEKFSWEHGFVVTHRLTTK 176 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SE-EEEEEECC------HH---------------HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--Cc-EEEEEeCC------cC---------------CHHHHHHHHHHCCCeEEEEEEEe
Confidence 87766532 8899999988 44 44443210 01 12245677888999877665543
Q ss_pred C
Q psy2408 242 S 242 (298)
Q Consensus 242 ~ 242 (298)
.
T Consensus 177 ~ 177 (207)
T 1wy7_A 177 I 177 (207)
T ss_dssp E
T ss_pred c
Confidence 3
No 210
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.53 E-value=1.5e-14 Score=118.44 Aligned_cols=119 Identities=17% Similarity=0.241 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
....+...++.. .++.+|||||||+|..+..+++.. +.+++++|+|+.+++.|++++...++.++++++++|+.+
T Consensus 57 ~~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 57 LAGQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344455555544 356799999999999999999873 679999999999999999999998887789999999876
Q ss_pred C-C-C-----CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 150 L-P-F-----DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 150 ~-~-~-----~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
. + + +.++||+|++... ..+. .+++.+.++|+|||.+++.+..+.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHHhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 3 2 1 2478999997643 2234 899999999999999998766543
No 211
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.53 E-value=1e-13 Score=112.01 Aligned_cols=147 Identities=9% Similarity=0.078 Sum_probs=109.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF 152 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 152 (298)
+.+...++..+ .+..+|||||||+|.++..++.. ..++|+++|+++.+++.+++++...|+. ..+.+.|...-+
T Consensus 120 D~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~- 194 (281)
T 3lcv_B 120 DEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR- 194 (281)
T ss_dssp HHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-
T ss_pred HHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-
Confidence 34444555555 44679999999999999999886 4679999999999999999999988875 788999987754
Q ss_pred CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHh
Q psy2408 153 DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNK 229 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (298)
+.+.||+|++.-+++++.+. ..+ ++...|+|+|.++-.+.-.....+ .. ....+ ...|.+.+.+
T Consensus 195 p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs-~g-m~~~Y----------~~~~e~~~~~ 261 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRS-KG-MFQNY----------SQSFESQARE 261 (281)
T ss_dssp CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC--------C-HHHHH----------HHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCC-cc-hhhHH----------HHHHHHHHHh
Confidence 45889999999999999888 555 999999999988776552111111 11 11111 2468888888
Q ss_pred CCCcEEEEE
Q psy2408 230 SGFELIKID 238 (298)
Q Consensus 230 ~Gf~~~~~~ 238 (298)
.|+.+...+
T Consensus 262 ~g~~~~~~~ 270 (281)
T 3lcv_B 262 RSCRIQRLE 270 (281)
T ss_dssp HTCCEEEEE
T ss_pred cCCceeeee
Confidence 999655543
No 212
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.53 E-value=5e-14 Score=112.32 Aligned_cols=97 Identities=13% Similarity=0.159 Sum_probs=77.9
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----------
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAK---GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------- 151 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------- 151 (298)
+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.. .. .++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccc
Confidence 4678899999999999999999875 4799999999831 12 46899999998875
Q ss_pred --------------CCCCCeeEEEecccccccC----hH--------HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 --------------FDNDSFDGGWFFESIFHMN----HS--------AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 --------------~~~~~fD~V~~~~~l~~~~----~~--------~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|++..++++.. +. .+++++.++|+|||.+++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 4567999999987776642 22 2788999999999999986543
No 213
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.51 E-value=3.2e-13 Score=117.89 Aligned_cols=102 Identities=17% Similarity=0.067 Sum_probs=84.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-CCC-CCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-LPF-DNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~fD~V~~~ 163 (298)
.++.+|||+| |+|.++..++... ..+|+++|+|+.+++.|++++...++. +++++++|+.+ +|. .+++||+|+++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEEC
Confidence 4678999999 9999999998853 369999999999999999999988876 79999999988 653 34689999997
Q ss_pred ccccccChHHHHHHHhhcccCCcEEEE
Q psy2408 164 ESIFHMNHSAALNEARRVLKSGSILTL 190 (298)
Q Consensus 164 ~~l~~~~~~~~l~~~~r~LkpgG~l~i 190 (298)
..+.......+++++.++|+|||++++
T Consensus 249 ~p~~~~~~~~~l~~~~~~LkpgG~~~~ 275 (373)
T 2qm3_A 249 PPETLEAIRAFVGRGIATLKGPRCAGY 275 (373)
T ss_dssp CCSSHHHHHHHHHHHHHTBCSTTCEEE
T ss_pred CCCchHHHHHHHHHHHHHcccCCeEEE
Confidence 655433222999999999999995533
No 214
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.51 E-value=2.8e-13 Score=107.88 Aligned_cols=89 Identities=19% Similarity=0.184 Sum_probs=72.5
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecc
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFE 164 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~ 164 (298)
...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.+++++. +++++++|+.+++ ++||+|+++.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECC
Confidence 445788999999999999999998522379999999999999998864 5899999998864 6899999999
Q ss_pred cccccChH---HHHHHHhhcc
Q psy2408 165 SIFHMNHS---AALNEARRVL 182 (298)
Q Consensus 165 ~l~~~~~~---~~l~~~~r~L 182 (298)
.+++..+. .+++++.+++
T Consensus 119 p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 119 PFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CC-------CHHHHHHHHHHE
T ss_pred CchhccCchhHHHHHHHHHhc
Confidence 99888754 8999999998
No 215
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.50 E-value=1.8e-13 Score=115.20 Aligned_cols=107 Identities=15% Similarity=0.063 Sum_probs=82.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC---C-CCceEEEECCCCCC-CCCCCCeeEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEG---L-LDKVNFLHGDALNL-PFDNDSFDGG 160 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~---~-~~~i~~~~~d~~~~-~~~~~~fD~V 160 (298)
+++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++.+...+ + .++++++.+|+.+. ....++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 356799999999999999999864 4689999999999999999877542 1 35799999998775 3346789999
Q ss_pred EecccccccCh-----HHHHHHHhhcccCCcEEEEEeC
Q psy2408 161 WFFESIFHMNH-----SAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 161 ~~~~~l~~~~~-----~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
++.......+. ..+++.+.++|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 98544332222 2799999999999999998753
No 216
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.50 E-value=2.3e-13 Score=121.88 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=93.3
Q ss_pred HhCCCC--CCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC-CCCC
Q psy2408 82 NKTSIT--KGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF-DNDS 156 (298)
Q Consensus 82 ~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~ 156 (298)
..+.+. ++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...++. ++.++++|+..++. ..++
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTC
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhcccc
Confidence 344555 89999999999999999999874 369999999999999999999988875 69999999988642 3578
Q ss_pred eeEEEec------ccccccCh----------------H-HHHHHHhhcccCCcEEEEEeCCCCCC
Q psy2408 157 FDGGWFF------ESIFHMNH----------------S-AALNEARRVLKSGSILTLTDLPLLSV 198 (298)
Q Consensus 157 fD~V~~~------~~l~~~~~----------------~-~~l~~~~r~LkpgG~l~i~~~~~~~~ 198 (298)
||+|++. .++...++ . .+|.++.++|||||+|++++......
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~ 252 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE 252 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc
Confidence 9999972 23332221 2 68999999999999999987765543
No 217
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=9.1e-14 Score=117.19 Aligned_cols=105 Identities=13% Similarity=-0.007 Sum_probs=84.4
Q ss_pred CCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC--CCCCCCeeEEEeccc
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL--PFDNDSFDGGWFFES 165 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~ 165 (298)
..+|||||||+|.++..+++. .+.++++||+++.+++.|++.+.... ..+++++++|+.++ .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 359999999999999999985 47799999999999999999875432 35799999998765 345689999998543
Q ss_pred ccc-----cChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 166 IFH-----MNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 166 l~~-----~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
... +....++++++++|+|||++++....
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 221 22238999999999999999987653
No 218
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=1.9e-13 Score=119.61 Aligned_cols=138 Identities=7% Similarity=0.058 Sum_probs=100.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCC-ceEEEECCCCCC-C-C--CCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLD-KVNFLHGDALNL-P-F--DNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~-~i~~~~~d~~~~-~-~--~~~~fD~V~ 161 (298)
.++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++.+ +++++++|+.+. + . ..++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5778999999999999999998422489999999999999999999998865 899999998763 2 1 245899999
Q ss_pred ecccc-----cccCh----H-HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCC
Q psy2408 162 FFESI-----FHMNH----S-AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSG 231 (298)
Q Consensus 162 ~~~~l-----~~~~~----~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 231 (298)
+.-.. ....+ . .+++.+.++|+|||.+++.+..... . ... + .+.+...+..+|
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~--~-~~~---~-----------~~~i~~~~~~~g 353 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM--T-VSQ---F-----------KKQIEKGFGKQK 353 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS--C-HHH---H-----------HHHHHHHHTTCC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC--C-HHH---H-----------HHHHHHHHHHcC
Confidence 84332 12222 2 6788889999999999998655321 1 111 1 124456677888
Q ss_pred CcEEEEEeCC
Q psy2408 232 FELIKIDDIT 241 (298)
Q Consensus 232 f~~~~~~~~~ 241 (298)
..++.....+
T Consensus 354 ~~~~~~~~~~ 363 (385)
T 2b78_A 354 HTYLDLQQLP 363 (385)
T ss_dssp CEEEEEECCC
T ss_pred CcEEEeCCCC
Confidence 8866555443
No 219
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.47 E-value=5.1e-13 Score=107.00 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=85.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.++.+|||||||+|.++..+. .+.+|+++|+++.+++.+++.+...+. +..+...|....+++ ++||+|++.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~-~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA-EAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC-CBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC-CCcchHHHHHHH
Confidence 456799999999999999887 577999999999999999999888774 588999999887654 699999999999
Q ss_pred cccChH--HHHHHHhhcccCCcEEEEEe
Q psy2408 167 FHMNHS--AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 167 ~~~~~~--~~l~~~~r~LkpgG~l~i~~ 192 (298)
+++.+. ...-++...|+++|.++-..
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 998777 34448888999998766654
No 220
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.46 E-value=2.1e-13 Score=121.10 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=92.3
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCCCC
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDNDS 156 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~ 156 (298)
+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...++. +.++++|+..++ ...++
T Consensus 93 ~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~ 170 (464)
T 3m6w_A 93 VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTY 170 (464)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSC
T ss_pred HHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhcccc
Confidence 3444566789999999999999999999864 369999999999999999999999885 899999987764 23578
Q ss_pred eeEEEec------ccccccCh----------------H-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 157 FDGGWFF------ESIFHMNH----------------S-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 157 fD~V~~~------~~l~~~~~----------------~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
||+|++. .++...++ . .+|.++.++|||||+|+.++.....
T Consensus 171 FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 171 FHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp EEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 9999952 22222111 2 7899999999999999998766443
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=1.3e-13 Score=118.07 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=84.5
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CCceEEEECCCCCC--CCCCCCeeE
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAE--GL-LDKVNFLHGDALNL--PFDNDSFDG 159 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~--~~-~~~i~~~~~d~~~~--~~~~~~fD~ 159 (298)
...+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++... ++ .++++++++|+.+. ..++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3466899999999999999999864 479999999999999999987642 33 35799999998764 234578999
Q ss_pred EEecccc--cccC---hHHHHHHHhhcccCCcEEEEEe
Q psy2408 160 GWFFESI--FHMN---HSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 160 V~~~~~l--~~~~---~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
|++.... .... ...+++++.++|+|||++++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9985432 1111 1289999999999999999963
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.46 E-value=1.1e-13 Score=117.19 Aligned_cols=108 Identities=18% Similarity=0.062 Sum_probs=84.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh--cCC-CCceEEEECCCCCC-CCCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA--EGL-LDKVNFLHGDALNL-PFDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~V~ 161 (298)
..+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+.. .++ .++++++.+|+.+. +..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999999864 47999999999999999998765 233 46799999998663 33457899999
Q ss_pred ecccccccCh----H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 162 FFESIFHMNH----S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 162 ~~~~l~~~~~----~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.......+. . .+++++.++|+|||.+++...+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 8544322211 2 7899999999999999987643
No 223
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.46 E-value=4.6e-13 Score=119.04 Aligned_cols=122 Identities=16% Similarity=0.199 Sum_probs=97.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP- 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~- 151 (298)
+.....+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...++ ++.++++|+..++
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQ 309 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHH
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchh
Confidence 3444455556667889999999999999999999865 37999999999999999999998886 3789999998875
Q ss_pred -CCCCCeeEEEe------cccccccCh----------------H-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 152 -FDNDSFDGGWF------FESIFHMNH----------------S-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 152 -~~~~~fD~V~~------~~~l~~~~~----------------~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
+++++||+|++ ..++.+.++ . .++.++.++|||||++++++.....
T Consensus 310 ~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 45578999996 234444333 1 6799999999999999998766543
No 224
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.45 E-value=4.5e-13 Score=113.33 Aligned_cols=108 Identities=21% Similarity=0.263 Sum_probs=82.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ++++++++|+.++++
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~- 104 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF- 104 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-
Confidence 456777778888888999999999999999999984 77999999999999999999887666 579999999998865
Q ss_pred CCCeeEEEecccccccChH---HHH---------------HHHhhcccCCc
Q psy2408 154 NDSFDGGWFFESIFHMNHS---AAL---------------NEARRVLKSGS 186 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~---~~l---------------~~~~r~LkpgG 186 (298)
++||+|+++...+ +..+ .++ ..+.|+++++|
T Consensus 105 -~~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 105 -PKFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp -CCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred -ccCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 4899999865543 3333 444 33567777766
No 225
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.45 E-value=1.5e-13 Score=121.79 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=92.6
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-CCCCC
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-FDNDS 156 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~ 156 (298)
+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...++. ++.+++.|+..++ ..+++
T Consensus 97 ~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~ 175 (456)
T 3m4x_A 97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGF 175 (456)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTC
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhcccc
Confidence 3444566789999999999999999999864 369999999999999999999999885 6999999987763 23478
Q ss_pred eeEEEecc------cccccC---------------h-H-HHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 157 FDGGWFFE------SIFHMN---------------H-S-AALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 157 fD~V~~~~------~l~~~~---------------~-~-~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
||+|++.. ++..-+ . . .+|.++.++|||||+|+.++.....
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 99999732 221111 1 1 6799999999999999998766543
No 226
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.45 E-value=4.6e-13 Score=106.21 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=75.6
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcC----------CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEE-ECCCCCCC--
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKG----------CRVDGITISKFQQESAMKTAKAEGLLDKVNFL-HGDALNLP-- 151 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~-~~d~~~~~-- 151 (298)
.+.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+ .+ .++.++ .+|+...+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHH
Confidence 357889999999999999999999754 789999999831 12 358889 89987642
Q ss_pred ------CCCCCeeEEEeccccccc----ChH--------HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 ------FDNDSFDGGWFFESIFHM----NHS--------AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ------~~~~~fD~V~~~~~l~~~----~~~--------~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+++++||+|++..+++.. .+. .+++++.++|+|||++++..+.
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 334689999986544432 221 6789999999999999998664
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.45 E-value=2.8e-14 Score=118.35 Aligned_cols=111 Identities=14% Similarity=0.021 Sum_probs=80.7
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH-HhcCCCCceEEE--ECCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTA-KAEGLLDKVNFL--HGDALNLPFDN 154 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~ 154 (298)
..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++.. .......++.++ ++|+..++ +
T Consensus 64 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~ 138 (265)
T 2oxt_A 64 AWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--V 138 (265)
T ss_dssp HHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--C
T ss_pred HHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--C
Confidence 34445455678899999999999999999985 7999999998 533221110 000011168889 99998875 5
Q ss_pred CCeeEEEecccccccChH--------HHHHHHhhcccCCc--EEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHMNHS--------AALNEARRVLKSGS--ILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~--------~~l~~~~r~LkpgG--~l~i~~~~ 194 (298)
++||+|++..+ ++..++ .+|..+.++|+||| .+++..+.
T Consensus 139 ~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 79999999776 544332 37899999999999 99987665
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.44 E-value=2.8e-14 Score=118.96 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=81.4
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH-HhcCCCCceEEE--ECCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTA-KAEGLLDKVNFL--HGDALNLPFDN 154 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~ 154 (298)
..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+++.. .......++.++ ++|+..++ +
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~ 146 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--P 146 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--C
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--C
Confidence 44555555678899999999999999999985 6999999998 543322110 000111168899 99998875 5
Q ss_pred CCeeEEEecccccccChH--------HHHHHHhhcccCCc--EEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHMNHS--------AALNEARRVLKSGS--ILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~--------~~l~~~~r~LkpgG--~l~i~~~~ 194 (298)
++||+|++..+ ++...+ .+|+.+.++|+||| .+++..+.
T Consensus 147 ~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 147 FQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 79999999876 444332 36899999999999 99987665
No 229
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.44 E-value=1.8e-12 Score=115.27 Aligned_cols=143 Identities=18% Similarity=0.282 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 71 QGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
.....+.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. +++++++|+.+.
T Consensus 269 ~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~ 346 (433)
T 1uwv_A 269 GVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHH
Confidence 346778888888888778889999999999999999985 789999999999999999999988875 799999999873
Q ss_pred ----CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHH
Q psy2408 151 ----PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDL 226 (298)
Q Consensus 151 ----~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
++++++||+|++.-.-.-.. .+++.+.+ ++|++.+++++.. ..+. .-...
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g~~--~~~~~l~~-~~p~~ivyvsc~p--------~tla---------------rd~~~ 400 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAGAA--GVMQQIIK-LEPIRIVYVSCNP--------ATLA---------------RDSEA 400 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTCCH--HHHHHHHH-HCCSEEEEEESCH--------HHHH---------------HHHHH
T ss_pred hhhhhhhcCCCCEEEECCCCccHH--HHHHHHHh-cCCCeEEEEECCh--------HHHH---------------hhHHH
Confidence 34457899999743221111 44444443 6898888886422 1111 11245
Q ss_pred HHhCCCcEEEEEeCC
Q psy2408 227 LNKSGFELIKIDDIT 241 (298)
Q Consensus 227 l~~~Gf~~~~~~~~~ 241 (298)
|.+.||.+.....+.
T Consensus 401 l~~~Gy~~~~~~~~d 415 (433)
T 1uwv_A 401 LLKAGYTIARLAMLD 415 (433)
T ss_dssp HHHTTCEEEEEEEEC
T ss_pred HHHCCcEEEEEEEec
Confidence 677899988766543
No 230
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.44 E-value=1.9e-13 Score=107.94 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=78.5
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+-..--+.++.+|||+|||+|.++..+++. +.+|+|+|+++.. .+ .++.++++|+.+.+..
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHH
Confidence 344433333323468899999999999999999996 8899999999741 12 4699999999886421
Q ss_pred -----------CCCeeEEEecccccccC-----------hH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 -----------NDSFDGGWFFESIFHMN-----------HS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 -----------~~~fD~V~~~~~l~~~~-----------~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.++||+|++........ .. .+++.+.++|+|||.|++..+.
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 14899999864332211 11 6788899999999999987654
No 231
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.43 E-value=2.5e-13 Score=119.55 Aligned_cols=108 Identities=25% Similarity=0.239 Sum_probs=88.4
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC----CCCCeeEEEe
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF----DNDSFDGGWF 162 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~V~~ 162 (298)
.++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++.++++++++|+.++.. +.++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 478899999999999999999852348999999999999999999998886689999999876521 2568999998
Q ss_pred ccccc---------ccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 163 FESIF---------HMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 163 ~~~l~---------~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.-... +.... .++.++.++|+|||.+++.+..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 53322 12334 8999999999999999888765
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.43 E-value=4.5e-13 Score=117.96 Aligned_cols=108 Identities=17% Similarity=0.094 Sum_probs=88.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEECCCCCCCC----CCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGL-LDKVNFLHGDALNLPF----DNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~i~~~~~d~~~~~~----~~~~fD~V~ 161 (298)
.++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++ .++++++++|+.++.. ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47789999999999999999984335999999999999999999999888 6589999999877521 146899999
Q ss_pred ecccc---------cccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 162 FFESI---------FHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 162 ~~~~l---------~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.-.. ...... .++.++.++|+|||.+++++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 86322 223445 8999999999999999998755
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=3.4e-13 Score=126.36 Aligned_cols=107 Identities=18% Similarity=0.283 Sum_probs=88.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCC-CCCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLL-DKVNFLHGDALNL-PFDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~fD~V~~~ 163 (298)
.++.+|||+|||+|.++..++. .++ +|+++|+|+.+++.+++++..+++. ++++++++|+.++ +...++||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~-~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 3688999999999999999988 454 6999999999999999999999987 5899999999873 3345789999985
Q ss_pred cc-----------ccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 164 ES-----------IFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 164 ~~-----------l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
-. +....+. .++..+.++|+|||.|++++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 32 2333344 8899999999999999987654
No 234
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.43 E-value=3.9e-13 Score=112.29 Aligned_cols=106 Identities=13% Similarity=0.001 Sum_probs=84.4
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CCceEEEECCCCCC-CCCCCCeeEEEe
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAE--GL-LDKVNFLHGDALNL-PFDNDSFDGGWF 162 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~V~~ 162 (298)
.+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+... ++ .++++++.+|+.+. +...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 56799999999999999999864 469999999999999999987541 23 35799999998763 333578999998
Q ss_pred cccccccCh-----HHHHHHHhhcccCCcEEEEEeC
Q psy2408 163 FESIFHMNH-----SAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 163 ~~~l~~~~~-----~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.......+. ..+++++.++|+|||.+++...
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 544322221 2899999999999999998753
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.42 E-value=2e-13 Score=116.34 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=85.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh--cC-C-CCceEEEECCCCCC-CCCCCCeeEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA--EG-L-LDKVNFLHGDALNL-PFDNDSFDGG 160 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~--~~-~-~~~i~~~~~d~~~~-~~~~~~fD~V 160 (298)
+.+.+|||||||+|..+..+++.. ..+++++|+++.+++.|++.+.. .+ + .++++++.+|+.+. +..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 456799999999999999999864 56999999999999999998764 22 2 35799999998763 3345789999
Q ss_pred Eecccccc---cC-----hHHHHHHHhhcccCCcEEEEEeC
Q psy2408 161 WFFESIFH---MN-----HSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 161 ~~~~~l~~---~~-----~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
++...... .+ ...+++++.++|+|||.+++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 98765533 11 12899999999999999998743
No 236
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.42 E-value=3.2e-13 Score=114.09 Aligned_cols=107 Identities=13% Similarity=0.042 Sum_probs=82.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh--cCC-CCceEEEECCCCCC-CCCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA--EGL-LDKVNFLHGDALNL-PFDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~V~ 161 (298)
..+.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++.+.. .++ .++++++.+|+.+. +...++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 345799999999999999999864 47999999999999999998754 223 35799999998653 33357899999
Q ss_pred ecccccccC------hHHHHHHHhhcccCCcEEEEEeC
Q psy2408 162 FFESIFHMN------HSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 162 ~~~~l~~~~------~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+...-.++. ...+++++.++|+|||.+++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 743321121 12899999999999999999743
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=1.1e-12 Score=114.73 Aligned_cols=105 Identities=22% Similarity=0.185 Sum_probs=83.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-CCCCCCeeEEEeccc
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-PFDNDSFDGGWFFES 165 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~ 165 (298)
.++.+|||+|||+|.++..++. .++.|+++|+|+.+++.+++++..+++.. .+.++|+.++ +...+.||+|++.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~-~ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAAR-KGAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHH-cCCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECCC
Confidence 4689999999999999999998 47789999999999999999999888763 5668998764 111344999998543
Q ss_pred ccc---------cChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 166 IFH---------MNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 166 l~~---------~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
... ..+. .++..+.++|+|||+|++.+..
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 311 1233 8899999999999999977655
No 238
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=2.4e-13 Score=119.13 Aligned_cols=105 Identities=24% Similarity=0.229 Sum_probs=87.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC----CCCCeeEEEec
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF----DNDSFDGGWFF 163 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~V~~~ 163 (298)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...++.+ +.++++|+.++.. ..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999996 6799999999999999999999988864 9999999877521 14689999984
Q ss_pred ccccc---------cChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 164 ESIFH---------MNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 164 ~~l~~---------~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
-.... .... .++.++.++|+|||.+++.+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 32211 1233 7999999999999999998765
No 239
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.41 E-value=1.8e-13 Score=116.27 Aligned_cols=106 Identities=21% Similarity=0.140 Sum_probs=81.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CCceEEEECCCCCC-CCCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAE--GL-LDKVNFLHGDALNL-PFDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~V~ 161 (298)
..+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++.+... ++ .++++++.+|+.+. +...++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 356799999999999999999864 579999999999999999987643 33 45799999998763 32457899999
Q ss_pred ecccccccCh-----HHHHHHHhhcccCCcEEEEEe
Q psy2408 162 FFESIFHMNH-----SAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 162 ~~~~l~~~~~-----~~~l~~~~r~LkpgG~l~i~~ 192 (298)
+...-...+. ..+++++.++|+|||.+++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8543221111 278999999999999999975
No 240
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=2.5e-13 Score=115.86 Aligned_cols=108 Identities=18% Similarity=0.026 Sum_probs=84.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh--cCC-CCceEEEECCCCCC-CCCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKA--EGL-LDKVNFLHGDALNL-PFDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~V~ 161 (298)
.++.+|||||||+|..+..+++.. +.+|+++|+|+.+++.|++++.. .++ .++++++++|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 356799999999999999999864 57999999999999999998764 223 35799999998663 22357899999
Q ss_pred eccccccc--C---hHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 162 FFESIFHM--N---HSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 162 ~~~~l~~~--~---~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+...-..- . ...+++++.++|+|||++++...+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 85431111 1 138999999999999999997543
No 241
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=2.1e-13 Score=114.45 Aligned_cols=105 Identities=17% Similarity=0.039 Sum_probs=82.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--CC--------CCceEEEECCCCCC-CCCCC
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAE--GL--------LDKVNFLHGDALNL-PFDND 155 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~--~~--------~~~i~~~~~d~~~~-~~~~~ 155 (298)
.++.+|||||||+|..+..+++....+++++|+++.+++.|++.+ .. ++ .++++++.+|+.+. +. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 456799999999999999999863459999999999999999987 33 22 35799999998653 22 57
Q ss_pred CeeEEEecccccccC-----hHHHHHHHhhcccCCcEEEEEeC
Q psy2408 156 SFDGGWFFESIFHMN-----HSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~-----~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+||+|++.......+ ...+++++.++|+|||.+++...
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 899999865432111 12789999999999999998743
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.40 E-value=1.1e-12 Score=112.89 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=89.0
Q ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCee
Q psy2408 79 IMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFD 158 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 158 (298)
.+...+ .++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.+++++...++.+++.++++|+.++. ++||
T Consensus 188 ~i~~~~--~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD 260 (336)
T 2yx1_A 188 RIMKKV--SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGN 260 (336)
T ss_dssp HHHHHC--CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEE
T ss_pred HHHHhc--CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCc
Confidence 344444 5788999999999999999 87 567999999999999999999999998778999999998865 7899
Q ss_pred EEEecccccccChH-HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 159 GGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 159 ~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
+|++.-.. .. .++..+.++|+|||.+++.+...
T Consensus 261 ~Vi~dpP~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 261 RVIMNLPK----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EEEECCTT----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EEEECCcH----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 99974211 12 78999999999999999977663
No 243
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.39 E-value=2.7e-13 Score=111.32 Aligned_cols=84 Identities=17% Similarity=0.238 Sum_probs=70.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++... ++++++++|+.+++++
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcc
Confidence 567788888888888999999999999999999985 689999999999999999887532 4799999999998776
Q ss_pred C-CCeeEEEe
Q psy2408 154 N-DSFDGGWF 162 (298)
Q Consensus 154 ~-~~fD~V~~ 162 (298)
+ ..|+ |++
T Consensus 92 ~~~~~~-vv~ 100 (244)
T 1qam_A 92 KNQSYK-IFG 100 (244)
T ss_dssp SSCCCE-EEE
T ss_pred cCCCeE-EEE
Confidence 4 4553 444
No 244
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.39 E-value=5.3e-13 Score=112.00 Aligned_cols=108 Identities=17% Similarity=-0.004 Sum_probs=84.7
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC--C-CCceEEEECCCCCC-CCCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEG--L-LDKVNFLHGDALNL-PFDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~--~-~~~i~~~~~d~~~~-~~~~~~fD~V~ 161 (298)
+++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++.+...+ + .++++++.+|+.+. +...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 456899999999999999999864 4799999999999999999876431 1 35799999998763 22257899999
Q ss_pred ecccccccCh-----HHHHHHHhhcccCCcEEEEEeCC
Q psy2408 162 FFESIFHMNH-----SAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 162 ~~~~l~~~~~-----~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.......+. ..+++++.++|+|||.+++...+
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 8543322221 38999999999999999987543
No 245
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.37 E-value=3.2e-12 Score=110.44 Aligned_cols=114 Identities=17% Similarity=0.148 Sum_probs=90.7
Q ss_pred HHHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHhcC------CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 78 RIMINKT-SITKGQRFIDIGCGFGLSGIRLAKAKG------CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 78 ~~l~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
..++..+ ...++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...++ ++.++++|....
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~ 196 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN 196 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc
Confidence 3344433 345678999999999999999987642 6899999999999999999887776 488999998764
Q ss_pred CCCCCCeeEEEecccccccCh-----------------H--HHHHHHhhcccCCcEEEEEeCC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNH-----------------S--AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~-----------------~--~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.+.++||+|+++-.+.+++. . .++.++.+.|+|||++++..+.
T Consensus 197 -~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 197 -LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp -CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred -cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 34578999999877655432 1 4799999999999999887654
No 246
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.37 E-value=4.1e-13 Score=111.22 Aligned_cols=97 Identities=8% Similarity=-0.076 Sum_probs=80.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--CC-CCceEEEECCCCCCCCCCCCeeEEEec
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAE--GL-LDKVNFLHGDALNLPFDNDSFDGGWFF 163 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~--~~-~~~i~~~~~d~~~~~~~~~~fD~V~~~ 163 (298)
+.+.+|||||||+|..+..+++. +.+|+++|+++.+++.|++.+... ++ .++++++.+|+.++. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 35679999999999999999887 589999999999999998765421 11 357999999998764 789999985
Q ss_pred ccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 164 ESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 164 ~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
..++ .+++.+.++|+|||.+++..
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3456 89999999999999999864
No 247
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.36 E-value=4.1e-12 Score=106.53 Aligned_cols=89 Identities=22% Similarity=0.272 Sum_probs=78.3
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++++|+.+++++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcc
Confidence 567888899998889999999999999999999995 789999999999999999998732 4799999999998887
Q ss_pred CCCeeEEEecccc
Q psy2408 154 NDSFDGGWFFESI 166 (298)
Q Consensus 154 ~~~fD~V~~~~~l 166 (298)
+.+||+|+++...
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 7789999977544
No 248
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.35 E-value=1.1e-11 Score=108.53 Aligned_cols=120 Identities=18% Similarity=0.117 Sum_probs=95.5
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-C--------------------------------------CeE
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-G--------------------------------------CRV 114 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--------------------------------------~~v 114 (298)
+.++..++...+..++..|||.+||+|.+++.++... + .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 5577778888888889999999999999998888642 1 469
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccc-ccCh---H-HHHHHHhhcccC--CcE
Q psy2408 115 DGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIF-HMNH---S-AALNEARRVLKS--GSI 187 (298)
Q Consensus 115 ~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~~~---~-~~l~~~~r~Lkp--gG~ 187 (298)
+|+|+|+.+++.|+.++...++.++++++++|+.+++.+ ++||+|+++-... .+.+ . .+.+.+.+.|++ ||.
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 999999999999999999999987899999999998754 5899999984432 2222 2 566666666665 888
Q ss_pred EEEEeCC
Q psy2408 188 LTLTDLP 194 (298)
Q Consensus 188 l~i~~~~ 194 (298)
+++....
T Consensus 346 ~~iit~~ 352 (393)
T 3k0b_A 346 VYVLTSY 352 (393)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 8886553
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.35 E-value=1.7e-11 Score=108.39 Aligned_cols=111 Identities=21% Similarity=0.294 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
....+.+.+++ +.++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|++++...++. ++++++|+.++.
T Consensus 277 ~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~-~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~ 350 (425)
T 2jjq_A 277 QAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAK-RGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS 350 (425)
T ss_dssp HHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC
T ss_pred HHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC
Confidence 34555666665 36788999999999999999998 4779999999999999999999988875 999999998874
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
. .+||+|++.-.-..... .+++.+. .|+|+|.+++++
T Consensus 351 ~--~~fD~Vv~dPPr~g~~~-~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 351 V--KGFDTVIVDPPRAGLHP-RLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp C--TTCSEEEECCCTTCSCH-HHHHHHH-HHCCSEEEEEES
T ss_pred c--cCCCEEEEcCCccchHH-HHHHHHH-hcCCCcEEEEEC
Confidence 2 38999998543211111 3555554 489999999975
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.35 E-value=2.5e-11 Score=105.72 Aligned_cols=120 Identities=16% Similarity=0.086 Sum_probs=96.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-C--------------------------------------CeE
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-G--------------------------------------CRV 114 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--------------------------------------~~v 114 (298)
+.++..++...+..++..|||.+||+|.+++.++... + .++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 5577778888888899999999999999999888642 2 469
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccc-ccCh---H-HHHHHHhhcccC--CcE
Q psy2408 115 DGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIF-HMNH---S-AALNEARRVLKS--GSI 187 (298)
Q Consensus 115 ~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~~~---~-~~l~~~~r~Lkp--gG~ 187 (298)
+|+|+|+.+++.|++++...++.++++++++|+.+++.+ ++||+|+++-... .+.+ . .+.+.+.+.|++ ||.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 999999999999999999999988899999999998754 5899999974432 2322 2 667777777776 888
Q ss_pred EEEEeCC
Q psy2408 188 LTLTDLP 194 (298)
Q Consensus 188 l~i~~~~ 194 (298)
+++....
T Consensus 339 ~~iit~~ 345 (384)
T 3ldg_A 339 QFILTND 345 (384)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 8887554
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.33 E-value=6.9e-15 Score=121.10 Aligned_cols=114 Identities=22% Similarity=0.249 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC-
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN- 154 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 154 (298)
..+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. ..++++++++|+.+++++.
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccC
Confidence 4677788888888999999999999999999985 6899999999999998887764 2357999999999987763
Q ss_pred CCeeEEEeccc-----------ccccChH-HHH----HHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFES-----------IFHMNHS-AAL----NEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~-----------l~~~~~~-~~l----~~~~r~LkpgG~l~i~~~~ 194 (298)
++| .|+++-. +.|.... ..+ +.+.|+|+|||.+.+....
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 678 5555421 2222233 444 7799999999988775433
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.33 E-value=2e-11 Score=106.66 Aligned_cols=120 Identities=19% Similarity=0.174 Sum_probs=96.8
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-C--------------------------------------CeE
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-G--------------------------------------CRV 114 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--------------------------------------~~v 114 (298)
+.+...++...+..++.+|||++||+|.+++.++... + .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 4577778888888899999999999999999887742 1 579
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccc-ccCh---H-HHHHHHhhcccC--CcE
Q psy2408 115 DGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIF-HMNH---S-AALNEARRVLKS--GSI 187 (298)
Q Consensus 115 ~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~~~---~-~~l~~~~r~Lkp--gG~ 187 (298)
+|+|+++.+++.|+.++...++.+++++.++|+.+++.+ ++||+|+++-... .+.+ . .+.+++.+.|++ |+.
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 999999999999999999999877899999999998654 6899999975542 2222 2 667777777776 888
Q ss_pred EEEEeCC
Q psy2408 188 LTLTDLP 194 (298)
Q Consensus 188 l~i~~~~ 194 (298)
+++.+..
T Consensus 340 ~~iit~~ 346 (385)
T 3ldu_A 340 YYLITSY 346 (385)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 8776554
No 253
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.32 E-value=1.4e-12 Score=110.36 Aligned_cols=108 Identities=17% Similarity=0.181 Sum_probs=77.2
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeC----CHHHHHHHHHHHHhcCCCCceEEEEC-CCCCCCCCC
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITI----SKFQQESAMKTAKAEGLLDKVNFLHG-DALNLPFDN 154 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~----s~~~l~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 154 (298)
+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+ .+++.++++ |+..++ .
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~ 146 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--P 146 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--C
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--c
Confidence 444444567899999999999999999995 58999999 554432111 01111 146899998 888765 4
Q ss_pred CCeeEEEeccccc---ccChH----HHHHHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFESIF---HMNHS----AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~---~~~~~----~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++||+|++..++. +..+. .+|..+.++|+|||.+++..+.
T Consensus 147 ~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 147 ERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred CCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 6899999976653 22222 4788899999999999986554
No 254
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=5.3e-12 Score=105.47 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=71.3
Q ss_pred hCCCCCCCeEEEeCCCC------CHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEE-EECCCCCCCCC
Q psy2408 83 KTSITKGQRFIDIGCGF------GLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNF-LHGDALNLPFD 153 (298)
Q Consensus 83 ~~~~~~~~~vLDiGcG~------G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~-~~~d~~~~~~~ 153 (298)
.+.++++.+|||+|||+ |. ..+++.. +.+|+|+|+|+. + .++++ +++|+.+++++
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCS
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCcc
Confidence 45678899999999955 55 4445443 479999999987 1 25888 99999987654
Q ss_pred CCCeeEEEecccccc-----------cChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFH-----------MNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~-----------~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++||+|++...... .... .+++++.++|||||+|++..+.
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 78999998643221 1112 7899999999999999997544
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.31 E-value=1.7e-11 Score=109.39 Aligned_cols=120 Identities=14% Similarity=0.060 Sum_probs=96.5
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--------------CCeEEEEeCCHHHHHHHHHHHHhcCCCC-
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--------------GCRVDGITISKFQQESAMKTAKAEGLLD- 138 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~- 138 (298)
..+++.+++.+.+.++.+|||.|||+|.++..+++.. +.+++|+|+++.++..|+.++...++..
T Consensus 157 ~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcC
Confidence 4566777777777788899999999999998888752 3689999999999999999988888743
Q ss_pred ceEEEECCCCCCCCCCCCeeEEEecccccccCh-----------------H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 139 KVNFLHGDALNLPFDNDSFDGGWFFESIFHMNH-----------------S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 139 ~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~-----------------~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++.+.++|....+.. ++||+|+++-.+..... . .+++++.+.|+|||++++..+.
T Consensus 237 ~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 237 RSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 578999998876543 58999999765544221 2 7899999999999999887643
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.27 E-value=2e-11 Score=100.52 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=71.9
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+++++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHH
Confidence 456778888888889999999999999999999984 68999999999999999999865 25799999999998754
Q ss_pred ----CCCeeEEEec
Q psy2408 154 ----NDSFDGGWFF 163 (298)
Q Consensus 154 ----~~~fD~V~~~ 163 (298)
.++|| |+++
T Consensus 91 ~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 91 SVKTDKPLR-VVGN 103 (255)
T ss_dssp GSCCSSCEE-EEEE
T ss_pred HhccCCCeE-EEec
Confidence 24688 5443
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.25 E-value=2.6e-11 Score=105.57 Aligned_cols=115 Identities=14% Similarity=0.115 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
....+...+++.+... +.+|||+|||+|.++..+++ ...+|+|+|+|+.+++.|++++..+++ ++++++++|+.++.
T Consensus 198 ~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 198 MNIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHH
T ss_pred HHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHH
Confidence 3466777788877654 57899999999999999988 467999999999999999999998888 47999999987641
Q ss_pred --CCC--------------CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 --FDN--------------DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 --~~~--------------~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.. .+||+|++.-.-. .+..++.+.|+++|+++....+
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEEEESC
T ss_pred HHHhhccccccccccccccCCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEEEECC
Confidence 111 3799998631110 3456677778899988887654
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.25 E-value=2.1e-11 Score=101.03 Aligned_cols=97 Identities=19% Similarity=0.174 Sum_probs=78.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++ +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+++++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChh
Confidence 4567788888888889 9999999999999999994 68999999999999999988752 4799999999998765
Q ss_pred C-CCeeEEEecccccccChH---HHHHH
Q psy2408 154 N-DSFDGGWFFESIFHMNHS---AALNE 177 (298)
Q Consensus 154 ~-~~fD~V~~~~~l~~~~~~---~~l~~ 177 (298)
+ ..+|.|+++-.. ++..+ .++..
T Consensus 107 ~~~~~~~iv~NlPy-~iss~il~~ll~~ 133 (271)
T 3fut_A 107 EVPQGSLLVANLPY-HIATPLVTRLLKT 133 (271)
T ss_dssp GSCTTEEEEEEECS-SCCHHHHHHHHHH
T ss_pred hccCccEEEecCcc-cccHHHHHHHhcC
Confidence 3 268888876544 44444 55544
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.24 E-value=1.8e-11 Score=108.59 Aligned_cols=110 Identities=19% Similarity=0.186 Sum_probs=86.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
..+++.+++.+...++.+|||+|||+|.++..+++.. +.+++|+|+++.+++.| .+++++++|+...+
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~ 94 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWE 94 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCC
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcC
Confidence 5567778888776567799999999999999999863 57999999999988776 35899999998865
Q ss_pred CCCCCeeEEEecccccc----------cCh------------------H--HHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFH----------MNH------------------S--AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~----------~~~------------------~--~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.++||+|+++-.... +.+ . .++..+.++|+|||++++..+.
T Consensus 95 -~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 95 -PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp -CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred -ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3478999999522211 111 1 5688999999999999887655
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.24 E-value=1.2e-10 Score=98.64 Aligned_cols=115 Identities=13% Similarity=-0.015 Sum_probs=87.0
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC---
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN--- 154 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~--- 154 (298)
+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..++. ++.++++|+.+++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~ 172 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRY 172 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCcccccc
Confidence 3344567889999999999999999999864 369999999999999999999998874 6999999998774322
Q ss_pred CCeeEEEec------ccccccC-----------h-------H-HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 155 DSFDGGWFF------ESIFHMN-----------H-------S-AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 155 ~~fD~V~~~------~~l~~~~-----------~-------~-~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
++||.|++. .++..-+ + . .+|..+.++++ ||+|+.++....
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 579999962 2222111 1 1 46788888887 899888766543
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.22 E-value=4.6e-09 Score=90.64 Aligned_cols=168 Identities=14% Similarity=0.104 Sum_probs=105.4
Q ss_pred HHHHHHHHHhCCCCC-----CCeEEEeCCCCCHHHHHHHHh----------------cCCeEEEEeCCHHHHHHHHHHHH
Q psy2408 74 DKLSRIMINKTSITK-----GQRFIDIGCGFGLSGIRLAKA----------------KGCRVDGITISKFQQESAMKTAK 132 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~----------------~~~~v~~vD~s~~~l~~a~~~~~ 132 (298)
..+.+..++.+...+ ..+|+|+|||+|..+..++.. +..+|..-|+-.+.....=..+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 445555556665543 579999999999999887321 13578888876554433322222
Q ss_pred hcC-----------C--CC-ceEEEECCCCCCCCCCCCeeEEEecccccccC----------------------------
Q psy2408 133 AEG-----------L--LD-KVNFLHGDALNLPFDNDSFDGGWFFESIFHMN---------------------------- 170 (298)
Q Consensus 133 ~~~-----------~--~~-~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---------------------------- 170 (298)
... . .. -+.-+.+.+..-.+|++++|+|+++.+||++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 110 0 00 02223344444457899999999999999987
Q ss_pred ----------hH-HHHHHHhhcccCCcEEEEEeCCCCCCCCCh---------hHHHHHHHh---------------hccc
Q psy2408 171 ----------HS-AALNEARRVLKSGSILTLTDLPLLSVSKND---------NKFKEYVKK---------------NIHS 215 (298)
Q Consensus 171 ----------~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---------~~~~~~~~~---------------~~~~ 215 (298)
|. .+|+..++.|+|||++++......+..+.. ..+...... ....
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~ 272 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPV 272 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccc
Confidence 23 578899999999999999877665432111 011111100 1123
Q ss_pred CCCCcchHHHHHH-hCCCcEEEEEeCC
Q psy2408 216 NFILVEHYPDLLN-KSGFELIKIDDIT 241 (298)
Q Consensus 216 ~~~~~~~~~~~l~-~~Gf~~~~~~~~~ 241 (298)
.+.+.+++...++ +.||.+...+.+.
T Consensus 273 y~ps~~E~~~~l~~~~~F~I~~le~~~ 299 (374)
T 3b5i_A 273 YAPSLQDFKEVVDANGSFAIDKLVVYK 299 (374)
T ss_dssp CCCCHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHhcCCcEEEEEEEEe
Confidence 4578999999998 5999998876543
No 262
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.17 E-value=1.1e-09 Score=94.65 Aligned_cols=149 Identities=12% Similarity=0.041 Sum_probs=97.2
Q ss_pred CCeEEEeCCCCCHHHHHHHHh------------------cCCeEEEEeCC-----------HHHHHHHHHHHHhcCCCCc
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA------------------KGCRVDGITIS-----------KFQQESAMKTAKAEGLLDK 139 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~------------------~~~~v~~vD~s-----------~~~l~~a~~~~~~~~~~~~ 139 (298)
..+|+|+||++|..+..+... +..+|+..|+. +.+.+.++.. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 579999999999999887664 12478888886 4443333221 221112
Q ss_pred eEEEECCCCC---CCCCCCCeeEEEecccccccChH----------------------------------------HHHH
Q psy2408 140 VNFLHGDALN---LPFDNDSFDGGWFFESIFHMNHS----------------------------------------AALN 176 (298)
Q Consensus 140 i~~~~~d~~~---~~~~~~~fD~V~~~~~l~~~~~~----------------------------------------~~l~ 176 (298)
.-|+.+.... -.+|++++|+|+++.+||++.+. .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455554443 36889999999999999997643 1256
Q ss_pred HHhhcccCCcEEEEEeCCCCCC--CCC-----hhHHHHHHHh----------hc-ccCCCCcchHHHHHHhC-CCcEEEE
Q psy2408 177 EARRVLKSGSILTLTDLPLLSV--SKN-----DNKFKEYVKK----------NI-HSNFILVEHYPDLLNKS-GFELIKI 237 (298)
Q Consensus 177 ~~~r~LkpgG~l~i~~~~~~~~--~~~-----~~~~~~~~~~----------~~-~~~~~~~~~~~~~l~~~-Gf~~~~~ 237 (298)
..++.|+|||++++......+. .+. ...+..+... .. ...+.+.+++..++++. ||.+...
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 6689999999999998876554 210 1111111111 11 23457899999999997 4888876
Q ss_pred EeC
Q psy2408 238 DDI 240 (298)
Q Consensus 238 ~~~ 240 (298)
+.+
T Consensus 290 e~~ 292 (384)
T 2efj_A 290 ETF 292 (384)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.17 E-value=3.6e-11 Score=101.16 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=72.2
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CC
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FD 153 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~ 153 (298)
.+.+++.+.+.++.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.|++++...+ .+++++++|+.+++ ++
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 4566677777889999999999999999999975 6799999999999999999988766 57999999998764 11
Q ss_pred ---CCCeeEEEecc
Q psy2408 154 ---NDSFDGGWFFE 164 (298)
Q Consensus 154 ---~~~fD~V~~~~ 164 (298)
.++||.|++..
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 15799998754
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=6.8e-11 Score=102.87 Aligned_cols=102 Identities=17% Similarity=0.065 Sum_probs=84.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHHHHhcCCCCc-eEEEECCCCCC-C-CCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAK-G-CRVDGITISKFQQESAMKTAKAEGLLDK-VNFLHGDALNL-P-FDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~-~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~-i~~~~~d~~~~-~-~~~~~fD~V~ 161 (298)
.++.+|||++||+|..++.++... | .+|+++|+++.+++.++++++.+++.++ +.++++|+.++ . ...++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 467899999999999999999864 4 5899999999999999999999998766 99999998654 1 1246799998
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+.- ...+ .++..+.+.|+|||.|+++.
T Consensus 131 lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 754 1223 78889999999999988876
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.12 E-value=1.6e-10 Score=100.51 Aligned_cols=100 Identities=23% Similarity=0.125 Sum_probs=82.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc---------------CCCCceEEEECCCCCCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAE---------------GLLDKVNFLHGDALNLP 151 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~---------------~~~~~i~~~~~d~~~~~ 151 (298)
++.+|||+|||+|..+..++... +.+|+++|+++.+++.++++++.. ++. +++++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 67899999999999999999974 468999999999999999999987 764 4999999987652
Q ss_pred C-CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 152 F-DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 152 ~-~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
. ..++||+|++.- . ... .++..+.+.|+|||.++++.
T Consensus 126 ~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 135799998532 1 223 88999999999999988875
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.12 E-value=4.3e-10 Score=105.40 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=92.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-------------------------------------------
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK------------------------------------------- 110 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------- 110 (298)
+.++..++...+..++..|||.+||+|.+++.++...
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 4577778888888889999999999999998887631
Q ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--CCCCCeeEEEeccccc-ccC---hH-HH---HHHHhh
Q psy2408 111 GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--FDNDSFDGGWFFESIF-HMN---HS-AA---LNEARR 180 (298)
Q Consensus 111 ~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~~l~-~~~---~~-~~---l~~~~r 180 (298)
..+++|+|+++.+++.|+.++...|+.+.+++.++|+.++. ...++||+|+++-... .+. +. .+ +.++.+
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 25799999999999999999999999888999999998873 3334899999974432 111 11 33 444445
Q ss_pred cccCCcEEEEEeCC
Q psy2408 181 VLKSGSILTLTDLP 194 (298)
Q Consensus 181 ~LkpgG~l~i~~~~ 194 (298)
.+.|||.+++....
T Consensus 336 ~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 336 NQFGGWNLSLFSAS 349 (703)
T ss_dssp HHCTTCEEEEEESC
T ss_pred hhCCCCeEEEEeCC
Confidence 55689999887554
No 267
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=7.9e-11 Score=100.47 Aligned_cols=107 Identities=18% Similarity=0.052 Sum_probs=80.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC---CC----CceEEEECCCCCCCC----CCCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG---LL----DKVNFLHGDALNLPF----DNDS 156 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~---~~----~~i~~~~~d~~~~~~----~~~~ 156 (298)
.+.+||+||||+|..+..+++....+|++||+++.+++.|++.+...+ ++ ++++++.+|+..+-- +.++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 568999999999999999988655789999999999999999875321 22 269999999877521 3578
Q ss_pred eeEEEecccc---cccC----hHHHHHHH----hhcccCCcEEEEEeCC
Q psy2408 157 FDGGWFFESI---FHMN----HSAALNEA----RRVLKSGSILTLTDLP 194 (298)
Q Consensus 157 fD~V~~~~~l---~~~~----~~~~l~~~----~r~LkpgG~l~i~~~~ 194 (298)
||+|++...- ...+ ...+++.+ .++|+|||.+++..-+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999985432 1112 12666666 8999999999886443
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.12 E-value=1.1e-11 Score=102.39 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=67.7
Q ss_pred CCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCH-------HHHHHHHHHHHhcCCCCceEEEECCCCCC-C-CCC
Q psy2408 84 TSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISK-------FQQESAMKTAKAEGLLDKVNFLHGDALNL-P-FDN 154 (298)
Q Consensus 84 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~-------~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~ 154 (298)
+.+.++.+|||+|||+|..+..++. .+++|+++|+|+ .+++.+++++...++.++++++++|+.++ + +++
T Consensus 79 ~~~~~~~~VLDlgcG~G~~a~~lA~-~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 79 VNHTAHPTVWDATAGLGRDSFVLAS-LGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp TTGGGCCCEEETTCTTCHHHHHHHH-TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred hCcCCcCeEEEeeCccCHHHHHHHH-hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 3445678999999999999999999 478999999999 99999988877666655699999998774 2 333
Q ss_pred --CCeeEEEecccccc
Q psy2408 155 --DSFDGGWFFESIFH 168 (298)
Q Consensus 155 --~~fD~V~~~~~l~~ 168 (298)
++||+|++.-.+.+
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 68999998655443
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.10 E-value=4e-10 Score=102.60 Aligned_cols=121 Identities=9% Similarity=-0.057 Sum_probs=94.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-------------------CCeEEEEeCCHHHHHHHHHHHHhc
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-------------------GCRVDGITISKFQQESAMKTAKAE 134 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~~v~~vD~s~~~l~~a~~~~~~~ 134 (298)
..+++.|++.+.+.++.+|||.|||+|.++..+++.. ...++|+|+++.++..|+.++...
T Consensus 155 ~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 4456667777777788999999999999988887642 147999999999999999998877
Q ss_pred CCCC----ceEEEECCCCCCC-CCCCCeeEEEecccccccC-------------h-H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 135 GLLD----KVNFLHGDALNLP-FDNDSFDGGWFFESIFHMN-------------H-S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 135 ~~~~----~i~~~~~d~~~~~-~~~~~fD~V~~~~~l~~~~-------------~-~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
++.. ++.+.++|....+ .+.++||+|+++-.+.... + . .++..+.+.|+|||++++..+.
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 7753 2778999987643 3357899999975443321 2 2 8999999999999998887553
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=5.1e-10 Score=91.86 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=65.4
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD 153 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 153 (298)
..+.+.+++.+.+.++.+|||||||+|.++..+++....+|+++|+|+.+++.++++ . ..+++++++|+.+++++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChh
Confidence 456788889988889999999999999999999995347999999999999999876 2 24799999999998765
Q ss_pred C
Q psy2408 154 N 154 (298)
Q Consensus 154 ~ 154 (298)
+
T Consensus 92 ~ 92 (249)
T 3ftd_A 92 S 92 (249)
T ss_dssp G
T ss_pred H
Confidence 3
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.08 E-value=1.4e-09 Score=85.63 Aligned_cols=100 Identities=14% Similarity=0.028 Sum_probs=78.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC--CCceEEEECCCCCC---------------
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGL--LDKVNFLHGDALNL--------------- 150 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~i~~~~~d~~~~--------------- 150 (298)
+..+|||+|| |..+..+++..+.+|+.+|.+++..+.+++.++..++ .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5679999998 4677777773378999999999999999999999998 78999999997542
Q ss_pred C--------C-CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 151 P--------F-DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 151 ~--------~-~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+ . ..++||+|+.-.-.. ...+..+.+.|+|||.+++.+.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~----~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR----VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH----HHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc----hhHHHHHHHhcCCCeEEEEeCC
Confidence 1 1 137899999865311 1566667799999999977654
No 272
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.07 E-value=3.5e-10 Score=94.24 Aligned_cols=74 Identities=15% Similarity=0.259 Sum_probs=63.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCe----EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCR----VDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~----v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
..+.+.+++.+.+.++.+|||||||+|.++..+++.. .+ |+++|+|+.+++.++++. ..+++++++|+.+
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhc
Confidence 4567778888888899999999999999999999853 34 999999999999999884 2479999999999
Q ss_pred CCCC
Q psy2408 150 LPFD 153 (298)
Q Consensus 150 ~~~~ 153 (298)
++++
T Consensus 102 ~~~~ 105 (279)
T 3uzu_A 102 FDFG 105 (279)
T ss_dssp CCGG
T ss_pred CChh
Confidence 8764
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.04 E-value=2.3e-09 Score=98.12 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCC----CCCCeEEEeCCCCCHHHHHHHHh---cCC--eEEEEeCCHHHHHHHHHHHHhcCCCCc
Q psy2408 69 FAQGSDKLSRIMINKTSI----TKGQRFIDIGCGFGLSGIRLAKA---KGC--RVDGITISKFQQESAMKTAKAEGLLDK 139 (298)
Q Consensus 69 ~~~~~~~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~---~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~ 139 (298)
+..+++.+.+.+.++..- ..+..|||+|||+|.++...++. .+. +|++||-|+ +...+++....+++.++
T Consensus 334 y~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dk 412 (637)
T 4gqb_A 334 YSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQ 412 (637)
T ss_dssp HHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCe
Confidence 344555566666555422 23458999999999995555443 233 789999997 67788888888999999
Q ss_pred eEEEECCCCCCCCCCCCeeEEEecccccccCh---HHHHHHHhhcccCCcEEE
Q psy2408 140 VNFLHGDALNLPFDNDSFDGGWFFESIFHMNH---SAALNEARRVLKSGSILT 189 (298)
Q Consensus 140 i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~---~~~l~~~~r~LkpgG~l~ 189 (298)
|+++.+|++++.+| +++|+|++-.+-..+-. +..+....|.|||||.++
T Consensus 413 VtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 413 VTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99999999998766 78999997433222211 277778889999999864
No 274
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.03 E-value=8.4e-10 Score=100.33 Aligned_cols=120 Identities=13% Similarity=-0.045 Sum_probs=91.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc----------------CCeEEEEeCCHHHHHHHHHHHHhcCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK----------------GCRVDGITISKFQQESAMKTAKAEGLL 137 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----------------~~~v~~vD~s~~~l~~a~~~~~~~~~~ 137 (298)
..+++.|++.+.+.++ +|||.+||+|.+...+++.. ...++|+|+++.++..|+.++...++.
T Consensus 231 ~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 231 KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 4566677777766665 99999999999988775431 358999999999999999999988887
Q ss_pred CceEEEECCCCCCC-CCCCCeeEEEecccccc-------------------------cCh----H-HHHHHHhhcccCCc
Q psy2408 138 DKVNFLHGDALNLP-FDNDSFDGGWFFESIFH-------------------------MNH----S-AALNEARRVLKSGS 186 (298)
Q Consensus 138 ~~i~~~~~d~~~~~-~~~~~fD~V~~~~~l~~-------------------------~~~----~-~~l~~~~r~LkpgG 186 (298)
.++.+.++|....+ ++..+||+|+++-.+.. ++. . .++..+.+.|+|||
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 389 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTG 389 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEE
T ss_pred cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCc
Confidence 66655888876543 45678999998533321 111 1 68999999999999
Q ss_pred EEEEEeCC
Q psy2408 187 ILTLTDLP 194 (298)
Q Consensus 187 ~l~i~~~~ 194 (298)
++.+..+.
T Consensus 390 r~aiVlP~ 397 (544)
T 3khk_A 390 SMALLLAN 397 (544)
T ss_dssp EEEEEEET
T ss_pred eEEEEecc
Confidence 98887654
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.00 E-value=2.7e-10 Score=93.62 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=75.0
Q ss_pred HHHHHhCCCCCC--CeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc-------C-CCCceEEEECCC
Q psy2408 78 RIMINKTSITKG--QRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAE-------G-LLDKVNFLHGDA 147 (298)
Q Consensus 78 ~~l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~-------~-~~~~i~~~~~d~ 147 (298)
+.+++.+.+.++ .+|||+|||+|..+..++.. +++|+++|.++.+...+++.++.. + +..+++++++|.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 455666777777 89999999999999999995 789999999998877776665422 1 224699999998
Q ss_pred CCC-CCCCCCeeEEEecccccccChHHHHHHHhhcccCCc
Q psy2408 148 LNL-PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGS 186 (298)
Q Consensus 148 ~~~-~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG 186 (298)
.++ +...++||+|++.-.+.+-....++++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 763 322247999998766654322255666666666544
No 276
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.98 E-value=4.4e-09 Score=90.14 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=100.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh-----------------cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE---CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA-----------------KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH---GDA 147 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~---~d~ 147 (298)
...+|+|+||++|..+..+... +..+|+..|+..+....+-..+.......+.-|+. +.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999888766543 12579999998877776665544211000123444 444
Q ss_pred CCCCCCCCCeeEEEecccccccChH----------------------------------HHHHHHhhcccCCcEEEEEeC
Q psy2408 148 LNLPFDNDSFDGGWFFESIFHMNHS----------------------------------AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 148 ~~~~~~~~~fD~V~~~~~l~~~~~~----------------------------------~~l~~~~r~LkpgG~l~i~~~ 193 (298)
..-.+|++++|+|+++.++|++.+. .+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 4456889999999999999997542 348889999999999999877
Q ss_pred CCCCCCC-------ChhHHHHHH----Hh-----------hcccCCCCcchHHHHHHhCCC-cEEEEEe
Q psy2408 194 PLLSVSK-------NDNKFKEYV----KK-----------NIHSNFILVEHYPDLLNKSGF-ELIKIDD 239 (298)
Q Consensus 194 ~~~~~~~-------~~~~~~~~~----~~-----------~~~~~~~~~~~~~~~l~~~Gf-~~~~~~~ 239 (298)
...+..+ ....+.... .. .....+.+.+++...+++.|. .+...+.
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~ 279 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEA 279 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEE
Confidence 6554311 011122111 11 112346779999999999864 7666543
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.97 E-value=6e-10 Score=97.14 Aligned_cols=75 Identities=21% Similarity=0.180 Sum_probs=64.8
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEECCCCCC-CC-CCCCeeEEEe
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAE--GLLDKVNFLHGDALNL-PF-DNDSFDGGWF 162 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~--~~~~~i~~~~~d~~~~-~~-~~~~fD~V~~ 162 (298)
.++.+|||+|||+|..+..+++ .+.+|+++|+|+.+++.|+.++... ++ .+++++++|+.+. +. ++++||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~-~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMS-KASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHh-cCCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 3588999999999999999988 4789999999999999999999987 77 6899999999874 31 2358999998
Q ss_pred c
Q psy2408 163 F 163 (298)
Q Consensus 163 ~ 163 (298)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 3
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.97 E-value=6.5e-09 Score=94.34 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=90.6
Q ss_pred HHHHHHHHhCC----CCCCCeEEEeCCCCCHHHHHHHHhc----CCeEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEEC
Q psy2408 75 KLSRIMINKTS----ITKGQRFIDIGCGFGLSGIRLAKAK----GCRVDGITISKFQQESAMKTAKAEGLL-DKVNFLHG 145 (298)
Q Consensus 75 ~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~----~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~ 145 (298)
.+++.|++.+. ..++.+|||.+||+|.+...+++.. ...++|+|+++.++..|+.++...++. .++.+.++
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~g 283 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEec
Confidence 34444444443 3577899999999999988887753 468999999999999999998888875 46889999
Q ss_pred CCCCC--C-CCCCCeeEEEeccccc-----------------c--cCh----H-HHHHHHhhccc-CCcEEEEEeCC
Q psy2408 146 DALNL--P-FDNDSFDGGWFFESIF-----------------H--MNH----S-AALNEARRVLK-SGSILTLTDLP 194 (298)
Q Consensus 146 d~~~~--~-~~~~~fD~V~~~~~l~-----------------~--~~~----~-~~l~~~~r~Lk-pgG~l~i~~~~ 194 (298)
|.... | .+..+||+|+++-.+. + ++. . .++..+.+.|+ |||++.+..+.
T Consensus 284 DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 284 DTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp CTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred ceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 98765 3 3467899999852211 0 111 1 68999999999 99998887654
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.97 E-value=4.3e-10 Score=92.39 Aligned_cols=92 Identities=12% Similarity=0.092 Sum_probs=69.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCe--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCR--VDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
..+.+.+++.+.+.++.+|||||||+|.++. +.. +.+ |+++|+++.|++.+++++... ++++++++|+.+++
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCC
Confidence 3567778888888889999999999999999 654 456 999999999999999876532 47999999999886
Q ss_pred CCC-----CCeeEEEecccccccChH
Q psy2408 152 FDN-----DSFDGGWFFESIFHMNHS 172 (298)
Q Consensus 152 ~~~-----~~fD~V~~~~~l~~~~~~ 172 (298)
+++ +..|.|+++-.. ++..+
T Consensus 81 ~~~~~~~~~~~~~vvsNlPY-~i~~~ 105 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLPY-NISTP 105 (252)
T ss_dssp HHHHHHHHTSCEEEEEECCT-TTHHH
T ss_pred HHHhhcccCCceEEEECCCC-CccHH
Confidence 542 134566665433 34433
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.92 E-value=1.9e-08 Score=83.53 Aligned_cols=108 Identities=16% Similarity=0.091 Sum_probs=83.9
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhc--C--CCCceEEEECCCCCC-CCCCCCeeEE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAE--G--LLDKVNFLHGDALNL-PFDNDSFDGG 160 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~--~--~~~~i~~~~~d~~~~-~~~~~~fD~V 160 (298)
+.+.+||-||.|.|..+..+++..+ .+++.||+++..++.+++.+... + -+++++++.+|+..+ .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3457999999999999999998644 68999999999999999987532 1 136899999999876 3346789999
Q ss_pred Eecccccc-----cChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 161 WFFESIFH-----MNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 161 ~~~~~l~~-----~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+.-..-.. +-...+++.+++.|+|||.++....+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 86432111 11119999999999999999986433
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.87 E-value=5.2e-09 Score=95.79 Aligned_cols=100 Identities=14% Similarity=0.005 Sum_probs=75.1
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cC-----------CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC-
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KG-----------CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD- 153 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~-----------~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~- 153 (298)
+..|||+|||+|.++...+.. .+ .+|++||.|+......+.... +++.++|+++.+|++++.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999997543221 12 399999999977766665554 67888899999999998653
Q ss_pred ----CCCeeEEEecccccccCh---HHHHHHHhhcccCCcEEE
Q psy2408 154 ----NDSFDGGWFFESIFHMNH---SAALNEARRVLKSGSILT 189 (298)
Q Consensus 154 ----~~~fD~V~~~~~l~~~~~---~~~l~~~~r~LkpgG~l~ 189 (298)
.+++|+|++-..-....+ +..|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 478999998554333222 278888889999999765
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.84 E-value=3.4e-09 Score=86.32 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
+...+.+. .+...++++.+|||+|||+|.++..+++..++ .++++|++..+....... ...+ .++..+..++...
T Consensus 59 aA~KL~ei-~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv~ 134 (277)
T 3evf_A 59 GTAKLRWF-HERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDIH 134 (277)
T ss_dssp HHHHHHHH-HHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCTT
T ss_pred HHHHHHHH-HHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEeccceeh
Confidence 33444443 44466788899999999999999998875443 788898874321000000 0001 1455566666555
Q ss_pred CCCCCCeeEEEecccccccCh----H----HHHHHHhhcccCC-cEEEEEeCC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNH----S----AALNEARRVLKSG-SILTLTDLP 194 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~----~----~~l~~~~r~Lkpg-G~l~i~~~~ 194 (298)
.++.++||+|++..+.. ... . .+|+.+.++|+|| |.+++-.+.
T Consensus 135 ~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 66678999999976554 332 1 4568889999999 999997665
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.84 E-value=4.4e-09 Score=86.48 Aligned_cols=129 Identities=16% Similarity=0.105 Sum_probs=86.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHh--------c-----CCeEEEEeCCH---HHHH-----------HHHHHHHhc-----
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKA--------K-----GCRVDGITISK---FQQE-----------SAMKTAKAE----- 134 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~--------~-----~~~v~~vD~s~---~~l~-----------~a~~~~~~~----- 134 (298)
.++.+|||+|+|+|..+..+++. + ..+++++|..+ +.+. .+++.+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 45579999999999998876653 1 14899999765 4444 455554431
Q ss_pred -----CCC---CceEEEECCCCC-CCC-CC---CCeeEEEecc-cccccCh---HHHHHHHhhcccCCcEEEEEeCCCCC
Q psy2408 135 -----GLL---DKVNFLHGDALN-LPF-DN---DSFDGGWFFE-SIFHMNH---SAALNEARRVLKSGSILTLTDLPLLS 197 (298)
Q Consensus 135 -----~~~---~~i~~~~~d~~~-~~~-~~---~~fD~V~~~~-~l~~~~~---~~~l~~~~r~LkpgG~l~i~~~~~~~ 197 (298)
.+. .+++++.+|+.+ ++. ++ ..||+|+.-. .-...++ +.+++.+.++|+|||+|+. +..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa-- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS-- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC--
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC--
Confidence 011 357789999876 332 22 2799999843 1222233 2899999999999999874 220
Q ss_pred CCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 198 VSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
...++..|.++||.+......+
T Consensus 215 ----------------------a~~vrr~L~~aGF~v~~~~g~~ 236 (257)
T 2qy6_A 215 ----------------------AGFVRRGLQEAGFTMQKRKGFG 236 (257)
T ss_dssp ----------------------BHHHHHHHHHHTEEEEEECCST
T ss_pred ----------------------CHHHHHHHHHCCCEEEeCCCCC
Confidence 1246778899999987665443
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.74 E-value=4.3e-08 Score=84.17 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=91.2
Q ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCC-----CceEEEECCCCCCC-C
Q psy2408 80 MINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLL-----DKVNFLHGDALNLP-F 152 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~~i~~~~~d~~~~~-~ 152 (298)
....+.+.+|.+|||+++|.|.=+..+++.. +..++++|+++..+...++++...+.. .++.+.+.|...++ .
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 3344567899999999999999999998853 347999999999999999998876643 46888889987763 3
Q ss_pred CCCCeeEEEe----cc----cccccC---------------hH--HHHHHHhhcccCCcEEEEEeCCCCCCCC
Q psy2408 153 DNDSFDGGWF----FE----SIFHMN---------------HS--AALNEARRVLKSGSILTLTDLPLLSVSK 200 (298)
Q Consensus 153 ~~~~fD~V~~----~~----~l~~~~---------------~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 200 (298)
..+.||.|++ +. ++..-+ .. .+|.++.+.|||||+|+-++-+....-.
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~EN 292 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQN 292 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhC
Confidence 3578999985 22 111101 11 7888999999999999988777655433
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.67 E-value=5e-08 Score=79.99 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---- 151 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 151 (298)
+.+.+++.+.+.++..+||.+||.|..+..+++. +++|+|+|.++.+++.+++ +.. +++.++++++.+++
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHH
Confidence 3566777778888999999999999999999996 7899999999999999998 543 47999999998863
Q ss_pred -CCCCCeeEEEecc
Q psy2408 152 -FDNDSFDGGWFFE 164 (298)
Q Consensus 152 -~~~~~fD~V~~~~ 164 (298)
...+++|.|++..
T Consensus 84 ~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 84 ALGVERVDGILADL 97 (285)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred HcCCCCcCEEEeCC
Confidence 2235799998743
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.66 E-value=1.2e-07 Score=78.62 Aligned_cols=105 Identities=16% Similarity=0.114 Sum_probs=82.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc------CCeEEEEeCCHH--------------------------HHHHHHHHHHhcC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK------GCRVDGITISKF--------------------------QQESAMKTAKAEG 135 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~------~~~v~~vD~s~~--------------------------~l~~a~~~~~~~~ 135 (298)
.+..|||+|+..|..+..++... +.+++++|..+. .++.++++++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 34599999999999998887642 578999996421 4677899999999
Q ss_pred CC-CceEEEECCCCC-CC-CCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 136 LL-DKVNFLHGDALN-LP-FDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 136 ~~-~~i~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+. ++++++.+|+.+ ++ ++.++||+|+.-.-. -... ..|..+.+.|+|||.+++.++.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 84 889999999865 33 445789999876532 1222 8899999999999999998764
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.64 E-value=5e-08 Score=71.43 Aligned_cols=102 Identities=13% Similarity=0.097 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCC-HHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFG-LSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP 151 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G-~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~ 151 (298)
.+.+.+.+.+.. .++.+|||||||+| ..+..|++..+..|+++|+++..++ +++.|+.+..
T Consensus 22 ~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~ 83 (153)
T 2k4m_A 22 WNDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCC
T ss_pred HHHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCc
Confidence 456777777776 35679999999999 6999999867889999999874333 8889998843
Q ss_pred CCC-CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 152 FDN-DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 152 ~~~-~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
... +.||+|++...=.-+. ..+.++.+- -|.-++|......
T Consensus 84 ~~~Y~~~DLIYsirPP~El~--~~i~~lA~~--v~adliI~pL~~E 125 (153)
T 2k4m_A 84 MEIYRGAALIYSIRPPAEIH--SSLMRVADA--VGARLIIKPLTGE 125 (153)
T ss_dssp HHHHTTEEEEEEESCCTTTH--HHHHHHHHH--HTCEEEEECBTTB
T ss_pred ccccCCcCEEEEcCCCHHHH--HHHHHHHHH--cCCCEEEEcCCCC
Confidence 211 4899997654322111 333333332 3566777655533
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.62 E-value=2.7e-08 Score=81.20 Aligned_cols=118 Identities=19% Similarity=0.132 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
+...+. ++.+...+.++.+|||+|||+|.++..+++..+ ..|+|+|++..+...+... ...+ .++.....++...
T Consensus 75 AAfKL~-ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~ 150 (282)
T 3gcz_A 75 GSAKLR-WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVF 150 (282)
T ss_dssp HHHHHH-HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGG
T ss_pred HHHHHH-HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchh
Confidence 334443 344555778999999999999999999887544 3789999976432111100 0001 1333444333323
Q ss_pred CCCCCCeeEEEecccccccChH--------HHHHHHhhcccCC--cEEEEEeCC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHS--------AALNEARRVLKSG--SILTLTDLP 194 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~--------~~l~~~~r~Lkpg--G~l~i~~~~ 194 (298)
.++.+++|+|+|..+.. .... .+|.-+..+|+|| |.|++-.+.
T Consensus 151 ~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 34568999999976655 3322 4566678899999 999997665
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.60 E-value=2.6e-07 Score=86.01 Aligned_cols=107 Identities=11% Similarity=-0.010 Sum_probs=76.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcC----CeEEEEeCCHHHHHHH--HHHHHh----cCCCCceEEEECCCCCC-CCCCC
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKG----CRVDGITISKFQQESA--MKTAKA----EGLLDKVNFLHGDALNL-PFDND 155 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~v~~vD~s~~~l~~a--~~~~~~----~~~~~~i~~~~~d~~~~-~~~~~ 155 (298)
.++.+|||.|||+|.++..+++..+ .+++|+|+++.+++.| +..+.. .++. ...+...|+... +.+.+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~-~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNN-APTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTB-CCEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCC-cceEEecchhcccccccC
Confidence 4678999999999999999988643 5799999999999999 443332 2221 234556666553 22357
Q ss_pred CeeEEEecccccc-c---------------------------Ch-H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 156 SFDGGWFFESIFH-M---------------------------NH-S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 156 ~fD~V~~~~~l~~-~---------------------------~~-~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+||+|+++--... . .+ . .++..+.+.|+|||++.+..+.
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 8999998644411 0 01 2 5788999999999999887665
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.48 E-value=6.2e-07 Score=76.53 Aligned_cols=121 Identities=16% Similarity=0.188 Sum_probs=79.3
Q ss_pred CCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccc
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFES 165 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 165 (298)
+.+|++|||+||++|.++..+++ .+++|++||+.+ |-.... . .+++.++..|+..+..+.+.||+|+|-.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~-rg~~V~aVD~~~-l~~~l~----~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVK-RNMWVYSVDNGP-MAQSLM----D---TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHH-TTCEEEEECSSC-CCHHHH----T---TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHH-CCCEEEEEEhhh-cChhhc----c---CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 47899999999999999999998 578999999864 212111 1 24799999999988666778999998554
Q ss_pred ccccChH-HHHHHHhhcccCC---cEEEEEeCCCCCCCCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCc
Q psy2408 166 IFHMNHS-AALNEARRVLKSG---SILTLTDLPLLSVSKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 166 l~~~~~~-~~l~~~~r~Lkpg---G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
. .+ ..+.-+.+.|..+ +.++....... ..+..+... .+.+...|+..||.
T Consensus 280 ~----~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk------~~~~~l~~~--------~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 280 E----KPAKVAALMAQWLVNGWCRETIFNLKLPMK------KRYEEVSHN--------LAYIQAQLDEHGIN 333 (375)
T ss_dssp S----CHHHHHHHHHHHHHTTSCSEEEEEEECCSS------SHHHHHHHH--------HHHHHHHHHHTTCC
T ss_pred C----ChHHhHHHHHHHHhccccceEEEEEEeccc------chHHHHHHH--------HHHHHHHHHhcCcc
Confidence 3 34 5555555555444 44433333211 112222111 23567788888886
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.41 E-value=4.6e-06 Score=75.67 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=90.0
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--------------CCeEEEEeCCHHHHHHHHHHHHhcCCCCc
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--------------GCRVDGITISKFQQESAMKTAKAEGLLDK 139 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~~ 139 (298)
..+++.|++.+.+.++.+|+|-+||+|.+...+.+.. ...++|+|+++.+...|+-++.-++.. .
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~ 281 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-Y 281 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-C
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-c
Confidence 5677788888888889999999999999987776531 246999999999999999888877764 3
Q ss_pred eEEEECCCCCCCC----CCCCeeEEEecccccc---------c------ChH--HHHHHHhhccc-------CCcEEEEE
Q psy2408 140 VNFLHGDALNLPF----DNDSFDGGWFFESIFH---------M------NHS--AALNEARRVLK-------SGSILTLT 191 (298)
Q Consensus 140 i~~~~~d~~~~~~----~~~~fD~V~~~~~l~~---------~------~~~--~~l~~~~r~Lk-------pgG~l~i~ 191 (298)
..+..+|....|. +..+||+|+++-.+.. + .+. .++..+.+.|+ |||++.+.
T Consensus 282 ~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 282 PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp CEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred ccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 5677888765442 2357999998654421 1 112 67888888886 79998887
Q ss_pred eCC
Q psy2408 192 DLP 194 (298)
Q Consensus 192 ~~~ 194 (298)
.+.
T Consensus 362 lP~ 364 (530)
T 3ufb_A 362 VPN 364 (530)
T ss_dssp EEH
T ss_pred ecc
Confidence 553
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.39 E-value=4e-06 Score=68.55 Aligned_cols=118 Identities=22% Similarity=0.255 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC-CCCC
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHG-DALN 149 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~-d~~~ 149 (298)
+...+ ..+.+...+.++.+|||+||++|.++.+++...++ +|.|+|+...--+.- ..+...++ .-+.+... |+..
T Consensus 79 ~~~KL-~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~ 155 (321)
T 3lkz_A 79 GTAKL-RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFY 155 (321)
T ss_dssp HHHHH-HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTS
T ss_pred HHHHH-HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhh
Confidence 33344 44455567789999999999999999988887665 699999965311000 00001111 13677776 8877
Q ss_pred CCCCCCCeeEEEecccccccChH--------HHHHHHhhcccCC-cEEEEEeCCC
Q psy2408 150 LPFDNDSFDGGWFFESIFHMNHS--------AALNEARRVLKSG-SILTLTDLPL 195 (298)
Q Consensus 150 ~~~~~~~fD~V~~~~~l~~~~~~--------~~l~~~~r~Lkpg-G~l~i~~~~~ 195 (298)
++. ..+|+|+|--. +..+++ ..|.-+.+.|++| |-+++-.+..
T Consensus 156 l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 156 RPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp SCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 653 67999998655 766664 3556667889999 8888866653
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.38 E-value=4.3e-07 Score=77.84 Aligned_cols=106 Identities=18% Similarity=0.089 Sum_probs=78.4
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC---C----CCceEEEECCCCCCC----CCCC
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG---L----LDKVNFLHGDALNLP----FDND 155 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~---~----~~~i~~~~~d~~~~~----~~~~ 155 (298)
.++.+||-||.|.|..+..+.+....+++.||+++..++.|++.+.... . .++++++..|+..+- -..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3567999999999999999998656799999999999999998764211 1 135889999986541 1246
Q ss_pred CeeEEEeccccc-------ccChH----HHHHHHhhcccCCcEEEEEe
Q psy2408 156 SFDGGWFFESIF-------HMNHS----AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 156 ~fD~V~~~~~l~-------~~~~~----~~l~~~~r~LkpgG~l~i~~ 192 (298)
+||+|+.-..-. ..... .+++.+++.|+|||.++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 899998742211 11111 78899999999999988753
No 294
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.34 E-value=1.4e-05 Score=68.16 Aligned_cols=155 Identities=10% Similarity=0.014 Sum_probs=102.2
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcC-----------------
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEG----------------- 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~----------------- 135 (298)
+.+++..+.. .+...|+.+|||.......+... .+.+++-||. |+.++.-++.+...+
T Consensus 86 D~~v~~fl~~---~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~ 161 (334)
T 1rjd_A 86 DAAILEFLVA---NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSP 161 (334)
T ss_dssp HHHHHHHHHH---CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTT
T ss_pred HHHHHHHHHH---CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccc
Confidence 4444444443 35679999999999998888874 3567777887 777777666666541
Q ss_pred ---CCCceEEEECCCCCCC--------C-CCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCC
Q psy2408 136 ---LLDKVNFLHGDALNLP--------F-DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSK 200 (298)
Q Consensus 136 ---~~~~i~~~~~d~~~~~--------~-~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 200 (298)
.+++..++..|+.+.. . ..+...++++-.++.+++.. .+++.+.... |+|.+++.+........
T Consensus 162 ~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~ 240 (334)
T 1rjd_A 162 FLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPN 240 (334)
T ss_dssp EEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTT
T ss_pred cccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCc
Confidence 1357889999998731 1 23567899999999999987 8888888876 78887766654431111
Q ss_pred Ch--hHH-HHHHH-h----hcccCCCCcchHHHHHHhCCCc
Q psy2408 201 ND--NKF-KEYVK-K----NIHSNFILVEHYPDLLNKSGFE 233 (298)
Q Consensus 201 ~~--~~~-~~~~~-~----~~~~~~~~~~~~~~~l~~~Gf~ 233 (298)
.. ... ..+.. . .....+.+.++..+.|.++||.
T Consensus 241 ~~fg~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 241 DRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCHHHHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred chHHHHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 01 111 11111 1 0111345788889999999996
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.31 E-value=1.3e-06 Score=71.81 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=67.5
Q ss_pred CCCCCCeEEEeCCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEec
Q psy2408 85 SITKGQRFIDIGCGFGLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFF 163 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~ 163 (298)
-+.++.+|||+||++|.++..+++..+ ..|.|+|+...+...... ... ...++.....++....++.+.+|+|++.
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc--cCCceEEeecCceeeecCCCCcCEEeec
Confidence 346889999999999999999998544 378999997532100000 000 0012333333333223446789999986
Q ss_pred ccccccChH--------HHHHHHhhcccCC-cEEEEEeCC
Q psy2408 164 ESIFHMNHS--------AALNEARRVLKSG-SILTLTDLP 194 (298)
Q Consensus 164 ~~l~~~~~~--------~~l~~~~r~Lkpg-G~l~i~~~~ 194 (298)
.+-. .... .+|.-+.++|+|| |.|++-.+.
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 5544 3322 5566678999999 999997666
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.29 E-value=3.4e-06 Score=70.93 Aligned_cols=60 Identities=22% Similarity=0.153 Sum_probs=51.7
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~ 135 (298)
..+.+.+++... .++..|||++||+|.++..+++ .|.+++|+|+++.+++.|++++....
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 456777777765 6789999999999999998887 78899999999999999999987653
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.21 E-value=2.2e-07 Score=97.90 Aligned_cols=145 Identities=13% Similarity=0.065 Sum_probs=72.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcC------CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-CCCCCCeeE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKG------CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-PFDNDSFDG 159 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~ 159 (298)
.+..+|||||.|+|..+..+....+ .+++..|+|+.+.+.++++++.. .+.....|..+. ++..++||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 4678999999999987666554332 37999999998888888887653 133333344332 334568999
Q ss_pred EEecccccccChH-HHHHHHhhcccCCcEEEEEeCCCCCCCC-ChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEE
Q psy2408 160 GWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLPLLSVSK-NDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKI 237 (298)
Q Consensus 160 V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 237 (298)
|++..+++..++. ..|.+++++|+|||++++.+........ ....+.. .......+.+.++|..+|.++||..+..
T Consensus 1315 via~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~--~~r~~~~~~~~~~w~~~l~~~gf~~~~~ 1392 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTS--PEQGGRHLLSQDQWESLFAGASLHLVAL 1392 (2512)
T ss_dssp EEEECC--------------------CCEEEEEEC----------------------------CTTTTSSTTTTEEEEEE
T ss_pred EEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccccccccccccc--ccccCCcccCHHHHHHHHHhCCCceeee
Confidence 9999999888888 9999999999999999987654211000 0000000 0001123467788989999999987754
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.21 E-value=2e-05 Score=62.39 Aligned_cols=112 Identities=21% Similarity=0.242 Sum_probs=75.4
Q ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC-CCCCCCCCCC
Q psy2408 78 RIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHG-DALNLPFDND 155 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~ 155 (298)
..+.+...+.++.+|||+||++|.++.+++...++ +|.|+|+-..--+.- ..+...|+ +.++|..+ |+..++ ..
T Consensus 68 ~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~~~~--~~ 143 (267)
T 3p8z_A 68 QWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVFYLP--PE 143 (267)
T ss_dssp HHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGGGCC--CC
T ss_pred HHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEeccceeecC--Cc
Confidence 44455557789999999999999999999887654 799999965311100 00112233 35889998 986654 26
Q ss_pred CeeEEEecccccccChH--------HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 156 SFDGGWFFESIFHMNHS--------AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~--------~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
++|.|+|--. +..+++ ..|.-+.+.|++ |-+++-.+..
T Consensus 144 ~~DtllcDIg-eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 144 KCDTLLCDIG-ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred cccEEEEecC-CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 7999987433 344443 456666789998 7888765553
No 299
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.11 E-value=2.1e-05 Score=63.18 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCce---EEEEC-C
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKV---NFLHG-D 146 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i---~~~~~-d 146 (298)
+...+.+ |-++.-++|+.+|||+||+.|.++.++++..+. .|.|.++.... . ..+....+..+ .+.++ |
T Consensus 58 AayKL~E-IdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 58 GTAKLRW-LVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPMLMQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHHH-HHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCCCCSTTGGGEEEECSCC
T ss_pred HHHHHHH-HHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCcccCCCceEEEeeccCC
Confidence 3334433 334445789999999999999999999986221 33444443210 0 00000000122 44546 9
Q ss_pred CCCCCCCCCCeeEEEecccccccChH--------HHHHHHhhcccCCc-EEEEEeCC
Q psy2408 147 ALNLPFDNDSFDGGWFFESIFHMNHS--------AALNEARRVLKSGS-ILTLTDLP 194 (298)
Q Consensus 147 ~~~~~~~~~~fD~V~~~~~l~~~~~~--------~~l~~~~r~LkpgG-~l~i~~~~ 194 (298)
+.+++ ...+|+|+|-.+=. ...+ .+|.-+.++|+||| .+++-.+.
T Consensus 132 f~~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 132 VFYKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccCCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 98753 45799999854432 4332 34555668999999 88887666
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.91 E-value=0.00066 Score=57.14 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=97.8
Q ss_pred CeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEECCCCCCC---------CCCCCee
Q psy2408 90 QRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG--LLDKVNFLHGDALNLP---------FDNDSFD 158 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~--~~~~i~~~~~d~~~~~---------~~~~~fD 158 (298)
..|+++|||.-.....+..-.+.+++-+| .|..++..++.+...+ ...+..++..|+.+ . +..+..-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 57999999987776666531247899999 5999999888887543 24578899999976 2 2223456
Q ss_pred EEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCCCCCCCChhHHH----HHHHhhc-------cc-CC-CC-cc
Q psy2408 159 GGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPLLSVSKNDNKFK----EYVKKNI-------HS-NF-IL-VE 221 (298)
Q Consensus 159 ~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~----~~~~~~~-------~~-~~-~~-~~ 221 (298)
++++-.+++++++. .+++.+...+.||+.+++.......... ..... ....... .. .+ .+ .+
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEW-REQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHH-HHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcch-hHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 78888999999887 8999999988999998887654322100 00011 1111111 11 12 25 78
Q ss_pred hHHHHHHhCCCcEE
Q psy2408 222 HYPDLLNKSGFELI 235 (298)
Q Consensus 222 ~~~~~l~~~Gf~~~ 235 (298)
+..+.|.++||+.+
T Consensus 261 ~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 261 VVADWLNRHGWRAT 274 (310)
T ss_dssp CHHHHHTTTTEEEE
T ss_pred HHHHHHHHCcCccc
Confidence 99999999999987
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.85 E-value=5e-05 Score=62.50 Aligned_cols=60 Identities=18% Similarity=0.106 Sum_probs=50.1
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEG 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~ 135 (298)
..+.+.+++... .++..|||..||+|..+....+ .|.+++|+|+++..++.+++++...+
T Consensus 199 ~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~-~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 199 RDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKK-LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 456666776654 6889999999999999988877 78999999999999999999987554
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.81 E-value=2.2e-05 Score=65.99 Aligned_cols=86 Identities=20% Similarity=0.091 Sum_probs=68.9
Q ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--
Q psy2408 76 LSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-- 151 (298)
Q Consensus 76 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 151 (298)
+.+.+++.+.+.|+..++|..||.|..+..+++.. .++|+|+|.++.+++.++ ++ ..+++.++++++.++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHH
Confidence 46778888888999999999999999999999874 469999999999999884 33 1367999999988762
Q ss_pred ---CC-CCCeeEEEecccc
Q psy2408 152 ---FD-NDSFDGGWFFESI 166 (298)
Q Consensus 152 ---~~-~~~fD~V~~~~~l 166 (298)
.. .+++|.|++...+
T Consensus 120 L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHTTCTTCEEEEEEECSC
T ss_pred HHhcCCCCcccEEEECCcc
Confidence 11 1369999875554
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.79 E-value=6.3e-05 Score=64.32 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=60.4
Q ss_pred HHHHHHHHHhCCCCC------CCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECC
Q psy2408 74 DKLSRIMINKTSITK------GQRFIDIGCGFGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGD 146 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~------~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d 146 (298)
..+++.|++.+++.+ +..|||||.|.|.++..|++.. +.+|+++++++.++...++.. . .+++.++.+|
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D 113 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRD 113 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSC
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECC
Confidence 566777777777653 5899999999999999999853 568999999999999988876 2 2579999999
Q ss_pred CCCC
Q psy2408 147 ALNL 150 (298)
Q Consensus 147 ~~~~ 150 (298)
+.++
T Consensus 114 ~l~~ 117 (353)
T 1i4w_A 114 PYDW 117 (353)
T ss_dssp TTCH
T ss_pred ccch
Confidence 9765
No 304
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.76 E-value=0.013 Score=49.59 Aligned_cols=163 Identities=12% Similarity=0.089 Sum_probs=99.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhcC---------------
Q psy2408 73 SDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA--KGCRVDGITISKFQQESAMKTAKAEG--------------- 135 (298)
Q Consensus 73 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~l~~a~~~~~~~~--------------- 135 (298)
.+..++..+... .+...|+-+|||.=.....+... .+.+++=||. |+.++.=++.+...+
T Consensus 77 iD~~v~~fl~~~--~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~ 153 (334)
T 3iei_A 77 VSQLIKAFLRKT--ECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTL 153 (334)
T ss_dssp HHHHHHHHHHHT--TTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSC
T ss_pred HHHHHHHHHHhC--CCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccc
Confidence 445555555543 24569999999998887777763 2567777777 444433222222100
Q ss_pred -------CCCceEEEECCCCCC----------CCCCCCeeEEEecccccccChH---HHHHHHhhcccCCcEEEEEeCCC
Q psy2408 136 -------LLDKVNFLHGDALNL----------PFDNDSFDGGWFFESIFHMNHS---AALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 136 -------~~~~i~~~~~d~~~~----------~~~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
...+..++..|+.+. .+..+..-++++-.++.+++.. .+++.+.+.. |+|.+++.+...
T Consensus 154 ~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~ 232 (334)
T 3iei_A 154 QMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVN 232 (334)
T ss_dssp BCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred ccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccC
Confidence 135688999999763 1344566788899999999887 8888888766 455666656553
Q ss_pred CCCCCChhHHHHHHHhhc-----ccCCCCcchHHHHHHhCCCcEEEEEeC
Q psy2408 196 LSVSKNDNKFKEYVKKNI-----HSNFILVEHYPDLLNKSGFELIKIDDI 240 (298)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 240 (298)
+.... ............ ...+.++++..+.|.++||..+...++
T Consensus 233 p~d~f-g~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 233 MGDRF-GQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp TTSHH-HHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred CCCHH-HHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 22110 011111111111 113456788899999999998776653
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.60 E-value=0.00031 Score=58.49 Aligned_cols=146 Identities=16% Similarity=0.092 Sum_probs=83.9
Q ss_pred HHHHHHHHHHH--HHHhCCCCCCCeEEEeCCCCCHHHHHHHH---h--cCC--eEEEEeCCH--------H-HHHHHHHH
Q psy2408 69 FAQGSDKLSRI--MINKTSITKGQRFIDIGCGFGLSGIRLAK---A--KGC--RVDGITISK--------F-QQESAMKT 130 (298)
Q Consensus 69 ~~~~~~~~~~~--l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~--~~~--~v~~vD~s~--------~-~l~~a~~~ 130 (298)
+.++..-.+.. +.++....+.-+|||+|-|+|........ . ... +++.+|..+ . .-+..+..
T Consensus 75 l~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l 154 (308)
T 3vyw_A 75 IRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFL 154 (308)
T ss_dssp HHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHH
T ss_pred HHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHH
Confidence 55554443332 22233223456899999999987644332 1 233 456666411 1 11112222
Q ss_pred HHhc----CCCCceEEEECCCCCC-C-CCCCCeeEEEecccccccChH-----HHHHHHhhcccCCcEEEEEeCCCCCCC
Q psy2408 131 AKAE----GLLDKVNFLHGDALNL-P-FDNDSFDGGWFFESIFHMNHS-----AALNEARRVLKSGSILTLTDLPLLSVS 199 (298)
Q Consensus 131 ~~~~----~~~~~i~~~~~d~~~~-~-~~~~~fD~V~~~~~l~~~~~~-----~~l~~~~r~LkpgG~l~i~~~~~~~~~ 199 (298)
.... +-.-.+.+..+|+.+. + +++..||+|+.-. +.--.+| .+++.++++++|||+++- +.
T Consensus 155 ~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt----- 226 (308)
T 3vyw_A 155 LERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS----- 226 (308)
T ss_dssp HHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC-----
T ss_pred HHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee-----
Confidence 2111 1011346777887652 2 3445799998743 3333333 999999999999998753 32
Q ss_pred CChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEEeCC
Q psy2408 200 KNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKIDDIT 241 (298)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 241 (298)
....++..|+++||.|.....++
T Consensus 227 -------------------aag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 227 -------------------SSLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp -------------------CCHHHHHHHHHTTCEEEEEECC-
T ss_pred -------------------CcHHHHHHHHHCCCEEEecCCCC
Confidence 12468889999999998877654
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.43 E-value=0.00026 Score=57.93 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=66.0
Q ss_pred HHHHHHHH-hCCCCCCCeEEEeCC------CCCHHHHHHHHh-c-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC
Q psy2408 75 KLSRIMIN-KTSITKGQRFIDIGC------GFGLSGIRLAKA-K-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHG 145 (298)
Q Consensus 75 ~~~~~l~~-~~~~~~~~~vLDiGc------G~G~~~~~l~~~-~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~ 145 (298)
.+.+++-. .+.++.+++|||+|+ .+|.. .+.+. . ++.|+++|+.+-. ...-.++++
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-------------sda~~~IqG 159 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-------------SDADSTLIG 159 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-------------CSSSEEEES
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-------------cCCCeEEEc
Confidence 44444411 345678999999997 44552 33332 2 3699999997521 011245999
Q ss_pred CCCCCCCCCCCeeEEEeccccccc----------ChH--HHHHHHhhcccCCcEEEEEeCCCC
Q psy2408 146 DALNLPFDNDSFDGGWFFESIFHM----------NHS--AALNEARRVLKSGSILTLTDLPLL 196 (298)
Q Consensus 146 d~~~~~~~~~~fD~V~~~~~l~~~----------~~~--~~l~~~~r~LkpgG~l~i~~~~~~ 196 (298)
|+..... .++||+|++-.+-... ... .++.=+.+.|+|||.|++-.+--.
T Consensus 160 D~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 160 DCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp CGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred ccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 9766532 4789999973221111 112 556667789999999999766533
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.37 E-value=0.0011 Score=57.23 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=71.7
Q ss_pred HHHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----C
Q psy2408 79 IMINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----P 151 (298)
Q Consensus 79 ~l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~ 151 (298)
.+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+-.++ .
T Consensus 181 al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKE 253 (371)
T ss_dssp HHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHH
Confidence 344667788999999999886 7788888887788 699999999998888654 321 2232221111 0
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+.+|+|+-.. ..+..+..+.++|+++|++++...
T Consensus 254 ~~~gg~D~vid~~-----g~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 254 ITDGGVNFALEST-----GSPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HTTSCEEEEEECS-----CCHHHHHHHHHTEEEEEEEEECCC
T ss_pred hcCCCCcEEEECC-----CCHHHHHHHHHHHhcCCEEEEeCC
Confidence 1123799986432 234678889999999999887644
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.33 E-value=0.00052 Score=60.06 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=71.2
Q ss_pred HhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C------C
Q psy2408 82 NKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P------F 152 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~------~ 152 (298)
...++.++.+||-+|||. |..+..+++..|+ +|+++|.+++.++.+++. |. .++..+-.++ . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----GF----ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----TC----EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CC----cEEcCCCcchHHHHHHHHh
Confidence 567788999999999986 8888888887788 999999999988877532 32 2333221111 0 0
Q ss_pred CCCCeeEEEecccccc---------cChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 153 DNDSFDGGWFFESIFH---------MNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~---------~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
....+|+|+-.-.-.. ...+..+..+.++|+++|++++...
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 1236999985443221 1122678889999999999887543
No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.11 E-value=0.0023 Score=55.86 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=72.0
Q ss_pred HhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-C-----C-C
Q psy2408 82 NKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-L-----P-F 152 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~-----~-~ 152 (298)
...++.++.+||-+|+|. |.++..+++..|+ +|+++|.+++.++.+++. |. ..+...-.+ + . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GF----EIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC----EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----CC----cEEccCCcchHHHHHHHHh
Confidence 456788999999999876 7888888887788 799999999988888643 32 233221111 0 0 1
Q ss_pred CCCCeeEEEeccccc---------ccChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 153 DNDSFDGGWFFESIF---------HMNHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~---------~~~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
....+|+|+-.-... |.+++ ..+..+.++|+++|++++...
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 124699998543321 23344 688999999999999887643
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.11 E-value=0.0026 Score=55.00 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=71.8
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----C--
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----P-- 151 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~-- 151 (298)
++..++.++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |.. .++...-.++ .
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhh
Confidence 3667788999999999875 7777888887788 899999999988888764 322 2222111110 0
Q ss_pred -CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 -FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 -~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
...+.+|+|+-. ......+..+.++|+++|++++....
T Consensus 248 ~~~~gg~Dvvid~-----~G~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 248 GLVPGGVDVVIEC-----AGVAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp SSSTTCEEEEEEC-----SCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred hccCCCCCEEEEC-----CCCHHHHHHHHHHhccCCEEEEEecc
Confidence 223479998753 33346788899999999999886543
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.08 E-value=0.0014 Score=56.32 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=71.4
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------CC
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------PF 152 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~~ 152 (298)
++..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+-.++ -.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHc
Confidence 4677889999999999876 7778888887788 899999999988888765 321 2222211111 01
Q ss_pred CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 153 DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
....+|+|+-. ...+..+..+.++|+|+|+++.....
T Consensus 232 ~g~g~D~v~d~-----~g~~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 232 DGKGVDKVVIA-----GGDVHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TTCCEEEEEEC-----SSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCCCEEEEC-----CCChHHHHHHHHHHhcCCEEEEeccc
Confidence 23469999743 22335778889999999999876543
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.07 E-value=0.00093 Score=57.28 Aligned_cols=99 Identities=21% Similarity=0.264 Sum_probs=70.4
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCee
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFD 158 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 158 (298)
.+...++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++ .+...+ . +.+|
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~-~~~~~~--~-~~~D 236 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----GVK---HFY-TDPKQC--K-EELD 236 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----TCS---EEE-SSGGGC--C-SCEE
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----CCC---eec-CCHHHH--h-cCCC
Confidence 34556788999999999875 7778888887799999999999888877653 432 222 333332 2 3799
Q ss_pred EEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 159 GGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 159 ~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+|+-.-. .+..+....++|+|+|++++....
T Consensus 237 ~vid~~g-----~~~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 237 FIISTIP-----THYDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EEEECCC-----SCCCHHHHHTTEEEEEEEEECCCC
T ss_pred EEEECCC-----cHHHHHHHHHHHhcCCEEEEECCC
Confidence 9874322 223567888999999999886543
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.03 E-value=0.0023 Score=54.59 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=71.8
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--C--CC
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--F--DN 154 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--~--~~ 154 (298)
.+...++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++..+-.++. . ..
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL----GAE---VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc----CCC---EEEeCCCcCHHHHHHHhC
Confidence 34666788999999999986 8888888887899999999999988887653 321 22222111110 0 01
Q ss_pred CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 155 DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+.+|+|+... .....+..+.++|+|+|++++...
T Consensus 231 g~~d~vid~~-----g~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 231 GGAHGVLVTA-----VSPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSEEEEEESS-----CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEEeC-----CCHHHHHHHHHHhccCCEEEEeCC
Confidence 3688886432 234678889999999999987644
No 314
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.01 E-value=0.011 Score=50.72 Aligned_cols=104 Identities=16% Similarity=0.100 Sum_probs=72.2
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCe-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC--CC------
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCR-VDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL--NL------ 150 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~--~~------ 150 (298)
++..++.+|.+||-+|+|. |..+..+++..|++ |+++|.+++.++.+++. ... -+.+...+.. ++
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~----~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE----VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT----CEEEECCSCCHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh----cccccccccchHHHHHHHHH
Confidence 4667788999999999875 77788888877886 99999999999998876 211 1222211110 00
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
......+|+|+-. ...+..+..+.++|+++|++++....
T Consensus 247 ~t~g~g~Dvvid~-----~g~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 247 SFGGIEPAVALEC-----TGVESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HTSSCCCSEEEEC-----SCCHHHHHHHHHHSCTTCEEEECCCC
T ss_pred HhCCCCCCEEEEC-----CCChHHHHHHHHHhcCCCEEEEEccC
Confidence 0123579998743 33345788899999999999886543
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.98 E-value=0.0049 Score=48.05 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=63.9
Q ss_pred HhCCCCCCCeEEEeCC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--------
Q psy2408 82 NKTSITKGQRFIDIGC--GFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-------- 151 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 151 (298)
+..++.++.+||..|+ |.|..+..++...|++|+++|.+++.++.+++ .+.. ..+ |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVE---YVG--DSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCS---EEE--ETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---EEe--eCCcHHHHHHHHHH
Confidence 4567889999999994 33666666666568999999999987766543 2321 122 222211
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
.....+|+|+.+.. ...+..+.++|+|+|+++...
T Consensus 103 ~~~~~~D~vi~~~g------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TTTCCEEEEEECCC------THHHHHHHHTEEEEEEEEECS
T ss_pred hCCCCCeEEEECCc------hHHHHHHHHHhccCCEEEEEc
Confidence 11246999986432 256778889999999988753
No 316
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.94 E-value=0.0026 Score=54.66 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=69.4
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC---CC----C-
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA---LN----L- 150 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~---~~----~- 150 (298)
++..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+- .+ +
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GAD---LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEECSSCCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEEcCcccccchHHHHHH
Confidence 3566788999999999875 7778888887788 899999999888877643 332 2232220 01 0
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
......+|+|+-. ...+..+....++|+|+|+++....
T Consensus 237 ~~~~~g~D~vid~-----~g~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 237 GQLGCKPEVTIEC-----TGAEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHTSCCSEEEEC-----SCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhCCCCCEEEEC-----CCChHHHHHHHHHhcCCCEEEEEec
Confidence 0001468998643 2333567888999999999987644
No 317
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.91 E-value=0.0079 Score=50.88 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=69.8
Q ss_pred HHHhCCCCCCCeEEEeC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------C
Q psy2408 80 MINKTSITKGQRFIDIG-CG-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------P 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~ 151 (298)
+.+..++.++.+||-.| +| .|..+..+++..|++|++++.+++.++.+++. |. -.++..+-.++ .
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GA---WETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---CEEEeCCCccHHHHHHHH
Confidence 34556788999999999 44 47778888887799999999999988888753 32 12232221111 0
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.....+|+|+.+..- ..+....++|+++|++++....
T Consensus 205 ~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTTCCEEEEEESSCG------GGHHHHHTTEEEEEEEEECCCT
T ss_pred hCCCCceEEEECCCh------HHHHHHHHHhcCCCEEEEEecC
Confidence 123479998864332 3566788999999999886543
No 318
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.89 E-value=0.0037 Score=53.85 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=70.7
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------CC
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------FD 153 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 153 (298)
.+..++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++..+..++. ..
T Consensus 182 ~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 182 VEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTG 254 (363)
T ss_dssp TTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhC
Confidence 3567788999999999886 7778888887899999999999988887654 321 23332211110 12
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
...+|+|+-+..- ..+..+.++|+|+|++++....
T Consensus 255 g~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 255 DRGADHILEIAGG------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TCCEEEEEEETTS------SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCceEEEECCCh------HHHHHHHHHhhcCCEEEEEecC
Confidence 3479999754331 3466778899999999887543
No 319
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.88 E-value=0.0026 Score=55.16 Aligned_cols=103 Identities=20% Similarity=0.307 Sum_probs=71.5
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECC--CCCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGD--ALNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d--~~~~----- 150 (298)
+.+...+.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++... -.++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---EEEccccCchhHHHHHH
Confidence 45667888999999999975 7778888887788 899999999888877643 332 222221 1111
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeCC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDLP 194 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~~ 194 (298)
....+.+|+|+-. ...+..+..+.++|++| |++++....
T Consensus 258 ~~~~gg~D~vid~-----~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 258 DLTDGGVDYSFEC-----IGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHTTSCBSEEEEC-----SCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HhcCCCCCEEEEC-----CCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 0112479998643 34446788899999997 998886543
No 320
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.88 E-value=0.0025 Score=53.74 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=65.6
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeE
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDG 159 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 159 (298)
++..++.++.+||-+|+|. |..+..+++..|++|++++ +++.++.+++. |. -.++ .|...+ .+.+|+
T Consensus 135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga---~~v~-~d~~~v---~~g~Dv 202 (315)
T 3goh_A 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GV---RHLY-REPSQV---TQKYFA 202 (315)
T ss_dssp HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TE---EEEE-SSGGGC---CSCEEE
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CC---CEEE-cCHHHh---CCCccE
Confidence 3777889999999999974 7888888887899999999 98888888664 32 1222 242222 468999
Q ss_pred EEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 160 GWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 160 V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
|+-.-. .+ .+....++|+|+|+++...
T Consensus 203 v~d~~g-----~~-~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDAVN-----SQ-NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC-------------TTGGGEEEEEEEEEEC
T ss_pred EEECCC-----ch-hHHHHHHHhcCCCEEEEEe
Confidence 874322 22 2356789999999988863
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.80 E-value=0.0068 Score=51.90 Aligned_cols=101 Identities=21% Similarity=0.176 Sum_probs=69.2
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC-CCCC------C
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA-LNLP------F 152 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~-~~~~------~ 152 (298)
++..++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.+ .++..+- .++. .
T Consensus 161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC----GAD---VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS---EEEECCTTTSCHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----CCC---EEEcCcccccHHHHHHHHh
Confidence 3566788999999999875 7777777877788999999999988887643 432 2222221 1110 0
Q ss_pred C---CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 153 D---NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 153 ~---~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
. ...+|+|+-.. .....+....++|+|+|+++....
T Consensus 234 ~~~~g~g~D~vid~~-----g~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCS-----GNEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHSSSCCSEEEECS-----CCHHHHHHHHHHSCTTCEEEECSC
T ss_pred ccccCCCCCEEEECC-----CCHHHHHHHHHHHhcCCEEEEEec
Confidence 1 24689986432 233567888899999999887643
No 322
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.80 E-value=0.0042 Score=52.97 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=69.3
Q ss_pred HHHHHhCCCCCCCeEEEeCCC--CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----
Q psy2408 78 RIMINKTSITKGQRFIDIGCG--FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---- 151 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 151 (298)
..+.+...+.++.+||-+|+| .|..+..+++..|++|+++|.+++.++.+++. +.. .++...-.++.
T Consensus 134 ~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 134 VTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVM 206 (340)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHH
T ss_pred HHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHH
Confidence 344567788999999999997 47777778877799999999999888887763 321 22222111110
Q ss_pred --CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 --FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 --~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.....+|+|+.+.. .+.+ ....++|+++|++++....
T Consensus 207 ~~~~~~g~Dvvid~~g-----~~~~-~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 207 ELTNGIGADAAIDSIG-----GPDG-NELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHTTTSCEEEEEESSC-----HHHH-HHHHHTEEEEEEEEECCCT
T ss_pred HHhCCCCCcEEEECCC-----ChhH-HHHHHHhcCCCEEEEEeec
Confidence 12347999875332 2222 3344899999999886543
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.77 E-value=0.0027 Score=54.91 Aligned_cols=100 Identities=24% Similarity=0.270 Sum_probs=67.7
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-C-CCCCCCe
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-L-PFDNDSF 157 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~f 157 (298)
+...++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++...-.+ . ... +.+
T Consensus 187 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~-~g~ 258 (369)
T 1uuf_A 187 LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAHL-KSF 258 (369)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTTT-TCE
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHhh-cCC
Confidence 3445788999999999975 7777788877799999999999888888753 321 222221101 0 111 579
Q ss_pred eEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 158 DGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 158 D~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
|+|+-.-.. +..++.+.++|+++|+++....
T Consensus 259 Dvvid~~g~-----~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 259 DFILNTVAA-----PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEECCSS-----CCCHHHHHTTEEEEEEEEECCC
T ss_pred CEEEECCCC-----HHHHHHHHHHhccCCEEEEecc
Confidence 998753321 2346678899999999887543
No 324
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.74 E-value=0.0052 Score=53.86 Aligned_cols=64 Identities=17% Similarity=0.216 Sum_probs=51.3
Q ss_pred CCCCCeEEEeCCCCCHHHHHHH-HhcC--CeEEEEeCCHHHHHHHHHHHHh--cCCC-CceEEEECCCCC
Q psy2408 86 ITKGQRFIDIGCGFGLSGIRLA-KAKG--CRVDGITISKFQQESAMKTAKA--EGLL-DKVNFLHGDALN 149 (298)
Q Consensus 86 ~~~~~~vLDiGcG~G~~~~~l~-~~~~--~~v~~vD~s~~~l~~a~~~~~~--~~~~-~~i~~~~~d~~~ 149 (298)
++++..|+|+|++.|..+..++ +..+ ++|+++|+++...+..++++.. ++.. .++.+++..+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4788999999999999999888 4332 6999999999999999999887 2222 578777765544
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.71 E-value=0.0031 Score=53.45 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=49.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGL 136 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~ 136 (298)
.+.+.+++... .++..|||.-||+|..+....+ .|.+++|+|+++..++.+++++...+.
T Consensus 240 ~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~-~gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAER-ESRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-cCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 45566665543 6889999999999999887776 799999999999999999998776543
No 326
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.66 E-value=0.0015 Score=55.90 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=66.3
Q ss_pred CCCCCCeEEEeCCCC-CHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC----CC-CCCCCCCCC
Q psy2408 85 SITKGQRFIDIGCGF-GLSGIRLAKAK--GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHG----DA-LNLPFDNDS 156 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~----d~-~~~~~~~~~ 156 (298)
++ ++.+||-+|+|. |..+..+++.. |++|+++|.|++.++.+++. |.. .++.. |. ..+. ....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHH-TTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhh-cCCC
Confidence 67 899999999975 77777888877 99999999999988888753 321 12211 10 1111 1237
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+-.- ..+..++.+.++|+|+|+++....
T Consensus 239 ~D~vid~~-----g~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 239 ASIAIDLV-----GTEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEEESS-----CCHHHHHHHHHHEEEEEEEEECCC
T ss_pred ccEEEECC-----CChHHHHHHHHHhhcCCEEEEeCC
Confidence 99987532 233577888999999999887644
No 327
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.65 E-value=0.013 Score=49.81 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=67.4
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------CC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------FD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 153 (298)
+..++.++.+||-+|+ | .|..+..+++..|++|+++|.+++.++.+++. |. -.++..+-.++. ..
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GA---EYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---SEEEETTTSCHHHHHHHHTT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---cEEEeCCCchHHHHHHHHhC
Confidence 3457789999999994 3 47777777877799999999999888877653 32 122322211110 12
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+..- ..+..+.++|+++|++++...
T Consensus 215 ~~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 215 GKGVDASFDSVGK------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TSCEEEEEECCGG------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCceEEEECCCh------HHHHHHHHHhccCCEEEEEcC
Confidence 3469999864432 356778889999999888643
No 328
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.62 E-value=0.01 Score=48.20 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=70.8
Q ss_pred CeEEEeCCCCCHHHHHHHHh--------cCCeEEEEe-----CCH----------------------HHHHHHHH---HH
Q psy2408 90 QRFIDIGCGFGLSGIRLAKA--------KGCRVDGIT-----ISK----------------------FQQESAMK---TA 131 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~--------~~~~v~~vD-----~s~----------------------~~l~~a~~---~~ 131 (298)
..|+|+||-.|..+..++.. ...+++++| +.+ +.+....+ +.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 39999999999998887652 236899999 321 11221111 11
Q ss_pred HhcCC-CCceEEEECCCCCC-C-----CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCCC
Q psy2408 132 KAEGL-LDKVNFLHGDALNL-P-----FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLPL 195 (298)
Q Consensus 132 ~~~~~-~~~i~~~~~d~~~~-~-----~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 195 (298)
...+. ++++.++.+++.+. | .+..++|+|+.-.-. +-+....+..+...|+|||.+++.++..
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTTC
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 22343 47899999998763 2 245679999876532 1111188999999999999999988753
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.62 E-value=0.0077 Score=51.19 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=69.6
Q ss_pred HHHHHhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----
Q psy2408 78 RIMINKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL----- 150 (298)
Q Consensus 78 ~~l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~----- 150 (298)
..+.+..++.++.+||-.|+ | .|..+..+++..|++|+++|.+++.++.+.+. .+.. .++...-.++
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD---GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS---EEEETTTSCHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC---EEEECCCHHHHHHHH
Confidence 34446778899999999998 3 47777777777799999999999877776322 2321 2222211111
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
....+.+|+|+.+..- ..+..+.++|+++|++++...
T Consensus 213 ~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 213 RECPKGIDVFFDNVGG------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEECCC
T ss_pred HhcCCCceEEEECCCc------chHHHHHHHHhhCCEEEEEee
Confidence 0112579998754332 467888899999999887643
No 330
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.62 E-value=0.011 Score=51.55 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=64.8
Q ss_pred CCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------CCCCC
Q psy2408 85 SITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------FDNDS 156 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 156 (298)
++.++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |.. .++..+-.++. .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 678999999999875 7777788887788 999999999998888755 321 22222111110 12346
Q ss_pred eeEEEecccccccChH-HHHHHHhhcc----cCCcEEEEEeCC
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVL----KSGSILTLTDLP 194 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~L----kpgG~l~i~~~~ 194 (298)
+|+|+- ....+ ..+..+.++| +++|++++....
T Consensus 283 ~D~vid-----~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 283 AKLFLE-----ATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CSEEEE-----CSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCEEEE-----CCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 999864 23333 3444455555 999999886543
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.62 E-value=0.0058 Score=52.78 Aligned_cols=102 Identities=22% Similarity=0.233 Sum_probs=69.7
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--CCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--LNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~~~----- 150 (298)
+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+- .++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GAT---ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCc---EEEecccccchHHHHHH
Confidence 44567788999999999875 7777788887788 899999999888877643 331 2222110 111
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 193 (298)
....+.+|+|+-. ......+..+.++|+++ |++++...
T Consensus 256 ~~t~gg~Dvvid~-----~g~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 256 EKTNGGVDYAVEC-----AGRIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHTTSCBSEEEEC-----SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCCCEEEEC-----CCCHHHHHHHHHHHhcCCCEEEEEcc
Confidence 0112479998643 33346778889999999 99887643
No 332
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.61 E-value=0.015 Score=49.58 Aligned_cols=101 Identities=17% Similarity=0.271 Sum_probs=68.0
Q ss_pred HHhCCCCCCCeEEEeCCCC--CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----CC
Q psy2408 81 INKTSITKGQRFIDIGCGF--GLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----PF 152 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~--G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~ 152 (298)
+...++.++.+||-.|+|. |..+..+++.. |++|+++|.+++.++.+++. +.. .++...-.+. ..
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRRI 235 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHHHHH
Confidence 3456788999999999983 56666777767 99999999999888877543 321 1222111111 01
Q ss_pred CC-CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 153 DN-DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 153 ~~-~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.. +.+|+|+.+.. ....+..+.++|+|+|++++...
T Consensus 236 ~~~~~~d~vi~~~g-----~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 TESKGVDAVIDLNN-----SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TTTSCEEEEEESCC-----CHHHHTTGGGGEEEEEEEEECCS
T ss_pred hcCCCceEEEECCC-----CHHHHHHHHHHHhcCCEEEEECC
Confidence 11 47999875432 23577888999999999887644
No 333
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.56 E-value=0.0087 Score=51.03 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=68.6
Q ss_pred HHHhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------
Q psy2408 80 MINKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------ 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------ 151 (298)
+.+...+.++.+||-.|+ | .|..+..+++..|++|++++.+++.++.+++. +. -.++..+ .++.
T Consensus 151 l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~v~~~~-~~~~~~v~~~ 222 (342)
T 4eye_A 151 YARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA---DIVLPLE-EGWAKAVREA 222 (342)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC---SEEEESS-TTHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---cEEecCc-hhHHHHHHHH
Confidence 336677889999999997 4 47888888887899999999999888877764 32 1233333 2210
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.....+|+|+-+..- ..+..+.++|+++|++++...
T Consensus 223 ~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 223 TGGAGVDMVVDPIGG------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp TTTSCEEEEEESCC--------CHHHHHHTEEEEEEEEEC--
T ss_pred hCCCCceEEEECCch------hHHHHHHHhhcCCCEEEEEEc
Confidence 122479999864432 256678889999999988643
No 334
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.55 E-value=0.0012 Score=54.27 Aligned_cols=101 Identities=11% Similarity=-0.092 Sum_probs=75.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-C---CCCCCCeeEEEecc
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-L---PFDNDSFDGGWFFE 164 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~---~~~~~~fD~V~~~~ 164 (298)
+..+||+=+|||.++..+.+ .+.+++.+|.++..++..++++.. .+++.++..|... + ..+...||+|++-=
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 45799999999999999988 567999999999999999888764 3579999999644 2 12345799999866
Q ss_pred cccccChH-HHHHHHhh--cccCCcEEEEEeC
Q psy2408 165 SIFHMNHS-AALNEARR--VLKSGSILTLTDL 193 (298)
Q Consensus 165 ~l~~~~~~-~~l~~~~r--~LkpgG~l~i~~~ 193 (298)
..+.-.+. .++..+.. .+.|+|.+++=-+
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 55533344 66665555 4568898877433
No 335
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.55 E-value=0.0083 Score=51.81 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=69.6
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--CCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--LNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~~~----- 150 (298)
+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++...- .++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHH
Confidence 44567788999999999875 7777777877788 899999999888887654 321 2222110 111
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 193 (298)
....+.+|+|+-. ......+..+.++|+++ |++++...
T Consensus 255 ~~~~~g~D~vid~-----~g~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 255 EMTDGGVDYSFEC-----IGNVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHTTSCBSEEEEC-----SCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEEC-----CCcHHHHHHHHHhhccCCcEEEEEec
Confidence 0112479998643 23346778889999999 99887643
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.52 E-value=0.01 Score=50.64 Aligned_cols=100 Identities=26% Similarity=0.290 Sum_probs=68.0
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----C-C
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----P-F 152 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~-~ 152 (298)
++..++ ++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+-.++ . .
T Consensus 161 l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 161 VLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp HTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHT
T ss_pred HHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHc
Confidence 466778 999999999964 6777777776788 999999999888887643 321 2222211111 0 1
Q ss_pred CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 153 DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
....+|+|+... ..+..++.+.++|+++|+++....
T Consensus 233 ~g~g~D~vid~~-----g~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 233 DGNGVDVFLEFS-----GAPKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TTSCEEEEEECS-----CCHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCCEEEECC-----CCHHHHHHHHHHHhcCCEEEEEcc
Confidence 123699987543 234677888899999999887643
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.51 E-value=0.0048 Score=52.12 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=47.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCH---HHHHHHHHHHHhcC
Q psy2408 74 DKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISK---FQQESAMKTAKAEG 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~---~~l~~a~~~~~~~~ 135 (298)
..+.+.++.... .++..|||.-||+|..+....+ .+.+.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~-~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQ-EGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHH-HTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHH-cCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 456666666653 6889999999999999888777 789999999999 99999999876543
No 338
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.50 E-value=0.0084 Score=51.83 Aligned_cols=102 Identities=23% Similarity=0.215 Sum_probs=69.3
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--CCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--LNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~~~----- 150 (298)
+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+- .++
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GAT---DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---EEEccccccchHHHHHH
Confidence 44567788999999999875 7777788887788 899999999888877643 321 2222110 011
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 193 (298)
....+.+|+|+-. ......+..+.++|+++ |++++...
T Consensus 260 ~~~~~g~Dvvid~-----~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 260 ELTAGGVDYSLDC-----AGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHTSCBSEEEES-----SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCccEEEEC-----CCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 0012378988643 33346788899999999 99887644
No 339
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.49 E-value=0.0048 Score=52.72 Aligned_cols=69 Identities=17% Similarity=0.142 Sum_probs=53.2
Q ss_pred CeEEEeCCCCCHHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC---CCCCeeEEEec
Q psy2408 90 QRFIDIGCGFGLSGIRLAKAKG---CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF---DNDSFDGGWFF 163 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~fD~V~~~ 163 (298)
.+|||+.||.|.++..+... | ..|.++|+++..++..+.++. ...++++|+.++.. +...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 58999999999999998874 5 269999999999998888753 24578889887631 11268999875
Q ss_pred cc
Q psy2408 164 ES 165 (298)
Q Consensus 164 ~~ 165 (298)
.-
T Consensus 76 pP 77 (343)
T 1g55_A 76 PP 77 (343)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.48 E-value=0.026 Score=48.46 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=68.8
Q ss_pred HHHhCCCC-----CCCeEEEeC-CCC-CHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-
Q psy2408 80 MINKTSIT-----KGQRFIDIG-CGF-GLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL- 150 (298)
Q Consensus 80 l~~~~~~~-----~~~~vLDiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~- 150 (298)
+.+..++. ++.+||-+| +|. |..+..+++. .+++|+++|.+++.++.+++. |.. .++... .++
T Consensus 158 l~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----Gad---~vi~~~-~~~~ 229 (363)
T 4dvj_A 158 FFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----GAH---HVIDHS-KPLA 229 (363)
T ss_dssp HHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----TCS---EEECTT-SCHH
T ss_pred HHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----CCC---EEEeCC-CCHH
Confidence 34566666 788999998 664 8888888886 488999999999888887653 321 222211 111
Q ss_pred ----CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 151 ----PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 151 ----~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
....+.+|+|+-+ ...+..+..+.++|+++|++++.
T Consensus 230 ~~v~~~~~~g~Dvvid~-----~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 230 AEVAALGLGAPAFVFST-----THTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHHTTCSCCEEEEEEC-----SCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHhcCCCceEEEEC-----CCchhhHHHHHHHhcCCCEEEEE
Confidence 1223579988642 33346788899999999999876
No 341
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.47 E-value=0.0064 Score=51.81 Aligned_cols=98 Identities=20% Similarity=0.185 Sum_probs=67.6
Q ss_pred HhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC------C
Q psy2408 82 NKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD------N 154 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~ 154 (298)
...++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++ .|.. .++ |..+..+. .
T Consensus 158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~--d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LVV--NPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEE--CTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EEe--cCCCccHHHHHHHHh
Confidence 444678999999999974 777777777778999999999988887764 2321 122 33221110 0
Q ss_pred CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 155 DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+.+|+|+... ..+..++.+.++|+++|+++....
T Consensus 229 ~~~d~vid~~-----g~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTA-----VSKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESS-----CCHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECC-----CCHHHHHHHHHHhhcCCEEEEecc
Confidence 4689886533 333577888899999999887543
No 342
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.47 E-value=0.0093 Score=51.52 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=69.1
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--CCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--LNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~~~----- 150 (298)
+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++...- .++
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GAT---DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCC---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CCc---eEEeccccchhHHHHHH
Confidence 44567788999999999875 7777778887788 899999999888877643 321 2222110 011
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 193 (298)
....+.+|+|+-. ......+..+.++|+++ |++++...
T Consensus 257 ~~~~~g~D~vid~-----~g~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 257 KMTNGGVDFSLEC-----VGNVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHTSCBSEEEEC-----SCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEEC-----CCCHHHHHHHHHHhhcCCcEEEEEcC
Confidence 0012368988643 23346778899999999 99887643
No 343
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.44 E-value=0.014 Score=49.44 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=66.8
Q ss_pred HHHhCCCCCCCeEEEeCC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-CC-----
Q psy2408 80 MINKTSITKGQRFIDIGC--GFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-LP----- 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~~----- 151 (298)
+.+..++.++.+||-.|| |.|..+..++...|++|+++|.+++.++.+++. +.. ..+ |..+ -.
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~~~ 207 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFD---AAF--NYKTVNSLEEAL 207 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEE--ETTSCSCHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCc---EEE--ecCCHHHHHHHH
Confidence 346667889999999998 346666666666789999999999888777332 321 122 3322 10
Q ss_pred --CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 --FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 --~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+.+|+|+.+... ..+....++|+++|++++...
T Consensus 208 ~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVGG------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHhCCCCeEEEECCCh------HHHHHHHHHHhcCCEEEEEec
Confidence 112479998765432 357788899999999887543
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.43 E-value=0.0091 Score=51.59 Aligned_cols=102 Identities=20% Similarity=0.258 Sum_probs=68.9
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--CCC-----
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--LNL----- 150 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~~~----- 150 (298)
+.+..++.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |.. .++..+- .++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GAT---ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---eEecccccchhHHHHHH
Confidence 44567788999999999875 7777777877788 899999999888877543 321 2222110 111
Q ss_pred CCCCCCeeEEEecccccccChHHHHHHHhhcccCC-cEEEEEeC
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSG-SILTLTDL 193 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 193 (298)
....+.+|+|+-. ...+..+....++|+++ |++++...
T Consensus 256 ~~~~~g~D~vid~-----~g~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 256 EMSNGGVDFSFEV-----IGRLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp HHTTSCBSEEEEC-----SCCHHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHhCCCCcEEEEC-----CCCHHHHHHHHHHhhcCCcEEEEecc
Confidence 0112478988643 33346778889999999 99887543
No 345
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.42 E-value=0.0076 Score=52.25 Aligned_cols=101 Identities=21% Similarity=0.174 Sum_probs=68.6
Q ss_pred HHhCC-CCCCCeEEEeCCCC-CHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECC---CCC----C
Q psy2408 81 INKTS-ITKGQRFIDIGCGF-GLSGIRLAKAKG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGD---ALN----L 150 (298)
Q Consensus 81 ~~~~~-~~~~~~vLDiGcG~-G~~~~~l~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d---~~~----~ 150 (298)
+...+ +.++.+||-+|+|. |..+..+++..| ++|+++|.+++.++.+++. |.. .++..+ -.+ +
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 187 FDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----GAD---LTLNRRETSVEERRKAI 259 (380)
T ss_dssp HHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----CCc---EEEeccccCcchHHHHH
Confidence 35567 78999999999775 777788888778 5999999999888887642 321 223222 001 0
Q ss_pred -C-CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 151 -P-FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 151 -~-~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
. .....+|+|+-.-. .+..+..+.++|+++|+++....
T Consensus 260 ~~~~~g~g~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 260 MDITHGRGADFILEATG-----DSRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHTTTSCEEEEEECSS-----CTTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEECCC-----CHHHHHHHHHHHhcCCEEEEEec
Confidence 0 11236999875332 22467788899999999887643
No 346
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.35 E-value=0.0055 Score=51.81 Aligned_cols=99 Identities=14% Similarity=0.231 Sum_probs=66.1
Q ss_pred HhCCCCCCC-eEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCC-CCCCCC
Q psy2408 82 NKTSITKGQ-RFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH-GDALNL-PFDNDS 156 (298)
Q Consensus 82 ~~~~~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~-~d~~~~-~~~~~~ 156 (298)
....+.++. +||-.|+ | .|..+..+++..|++|++++.+++.++.+++. |.. .++. .+.... ....+.
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~ 211 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN---RILSRDEFAESRPLEKQL 211 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS---EEEEGGGSSCCCSSCCCC
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEecCCHHHHHhhcCCC
Confidence 445555532 4999997 4 48888888887899999999999988888764 322 1221 111111 122457
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+-. ... ..+..+.++|+|+|+++....
T Consensus 212 ~d~v~d~-----~g~-~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 212 WAGAIDT-----VGD-KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp EEEEEES-----SCH-HHHHHHHHTEEEEEEEEECCC
T ss_pred ccEEEEC-----CCc-HHHHHHHHHHhcCCEEEEEec
Confidence 9987643 222 478888999999999988643
No 347
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.30 E-value=0.02 Score=48.27 Aligned_cols=98 Identities=18% Similarity=0.142 Sum_probs=64.6
Q ss_pred HHHhCCCCCCCeEEEeC-CCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-CCCCCCC
Q psy2408 80 MINKTSITKGQRFIDIG-CGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-LPFDNDS 156 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~ 156 (298)
.++..++.++.+||-+| +|. |..+..+++..|++|++++ ++..++.+++ .|.. .++..+-.+ +.-.-..
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTP 215 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSC
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccC
Confidence 34777889999999997 664 8888888887899999998 5554665554 3432 233222111 1101146
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
+|+|+-. ...+.+ ....++|+++|+++..
T Consensus 216 ~D~v~d~-----~g~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDL-----VGGDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEES-----SCHHHH-HHHGGGEEEEEEEEEC
T ss_pred CCEEEEC-----CCcHHH-HHHHHhccCCCEEEEe
Confidence 8988643 233333 7889999999998875
No 348
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.29 E-value=0.026 Score=48.11 Aligned_cols=100 Identities=20% Similarity=0.191 Sum_probs=68.3
Q ss_pred HHHHhCCCC------CCCeEEEe-CCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 79 IMINKTSIT------KGQRFIDI-GCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 79 ~l~~~~~~~------~~~~vLDi-GcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
.+.+...+. ++.+||-+ |+|. |..+..+++..|++|++++.+++.++.+++. |.. .++..+ .++
T Consensus 135 ~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~-~~~ 206 (346)
T 3fbg_A 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD---IVLNHK-ESL 206 (346)
T ss_dssp HHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS---EEECTT-SCH
T ss_pred HHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEEECC-ccH
Confidence 344666776 89999999 4554 7777788887799999999999988888764 321 222211 111
Q ss_pred -----CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 151 -----PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 151 -----~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
......+|+|+-+ ...+..+..+.++|+++|+++..
T Consensus 207 ~~~~~~~~~~g~Dvv~d~-----~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 207 LNQFKTQGIELVDYVFCT-----FNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp HHHHHHHTCCCEEEEEES-----SCHHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHhCCCCccEEEEC-----CCchHHHHHHHHHhccCCEEEEE
Confidence 0123469988753 23346778899999999998764
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.29 E-value=0.02 Score=49.14 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=68.4
Q ss_pred HHhCCCCCCCeEEEeC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----CCC
Q psy2408 81 INKTSITKGQRFIDIG-CG-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----PFD 153 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~ 153 (298)
.+..++.++.+||-+| +| .|..+..+++..|++|++++.+++.++.+++ .|.. .++..+-.++ ...
T Consensus 156 ~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 156 KELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp HHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHC
T ss_pred HHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhc
Confidence 3455778999999999 34 5888888888789999999999988887765 2321 2222221111 011
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+..- ..++.+.++|+++|++++...
T Consensus 229 ~~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 229 PEGVDVVYESVGG------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp TTCEEEEEECSCT------HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCH------HHHHHHHHHHhcCCEEEEEeC
Confidence 2469998754331 467788899999999887543
No 350
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.29 E-value=0.0061 Score=52.05 Aligned_cols=102 Identities=19% Similarity=0.162 Sum_probs=65.6
Q ss_pred HHHhCCCCCCCeEEEeCCCC-CHHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------C
Q psy2408 80 MINKTSITKGQRFIDIGCGF-GLSGIRLAKA-KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------P 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~ 151 (298)
.++...+.++.+||=+|+|. |..+..+++. .+++|+++|.+++.++.+++. +.. .++...-.+. -
T Consensus 155 ~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~---~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 155 AIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GAD---VTINSGDVNPVDEIKKI 227 (348)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCS---EEEEC-CCCHHHHHHHH
T ss_pred eecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCe---EEEeCCCCCHHHHhhhh
Confidence 34566778999999999986 4555555554 478999999999887777654 322 2222211111 0
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.....+|.++... .....+....++|+++|++++...
T Consensus 228 t~g~g~d~~~~~~-----~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 228 TGGLGVQSAIVCA-----VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp TTSSCEEEEEECC-----SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCCCceEEEEec-----cCcchhheeheeecCCceEEEEec
Confidence 1223566665422 233678888999999999887644
No 351
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.28 E-value=0.01 Score=50.58 Aligned_cols=97 Identities=15% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCCCCCeEEEeCCCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------CCCCC
Q psy2408 85 SITKGQRFIDIGCGF-GLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------FDNDS 156 (298)
Q Consensus 85 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 156 (298)
.+.++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. |.. .++..+- ++. .....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GAD---AAVKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TCS---EEEECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCCC-cHHHHHHHHhCCCC
Confidence 568899999999976 77788888776 78999999999988888653 432 2232221 110 01237
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+|+|+- ....+..+..+.++|+++|++++....
T Consensus 240 ~d~v~d-----~~G~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 240 ATAVFD-----FVGAQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp EEEEEE-----SSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CeEEEE-----CCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 898864 333446788999999999999886543
No 352
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.28 E-value=0.0051 Score=52.81 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=65.8
Q ss_pred HhCCCCCC------CeEEEeCCCC-CHHH-HHHH-HhcCCe-EEEEeCCHH---HHHHHHHHHHhcCCCCceEEEECCCC
Q psy2408 82 NKTSITKG------QRFIDIGCGF-GLSG-IRLA-KAKGCR-VDGITISKF---QQESAMKTAKAEGLLDKVNFLHGDAL 148 (298)
Q Consensus 82 ~~~~~~~~------~~vLDiGcG~-G~~~-~~l~-~~~~~~-v~~vD~s~~---~l~~a~~~~~~~~~~~~i~~~~~d~~ 148 (298)
+..++.++ .+||-+|+|. |..+ ..++ +..|++ |+++|.+++ .++.+++. |. ..+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l----Ga----~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL----DA----TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT----TC----EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc----CC----ccc--CCC
Confidence 44455788 9999999865 7777 7888 767887 999999887 77777542 32 222 322
Q ss_pred CCCCC-----CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 149 NLPFD-----NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 149 ~~~~~-----~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+..+. .+.+|+|+-. ...+..+..+.++|+++|+++....
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~-----~g~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEA-----TGFPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEEC-----SCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred ccCHHHHHHhCCCCCEEEEC-----CCChHHHHHHHHHHhcCCEEEEEeC
Confidence 21110 1368988643 3333578888999999999887644
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.26 E-value=0.017 Score=49.43 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=67.8
Q ss_pred HHhCCCCCCCeEEEeC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC
Q psy2408 81 INKTSITKGQRFIDIG-CG-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD 153 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 153 (298)
.+..++.++.+||-.| +| .|..+..+++..|++|+++|.+++.++.+++. |.. .++..+-.++. ..
T Consensus 160 ~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHHh
Confidence 3567788999999995 34 37777777877799999999999988888753 321 22222211110 01
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+..- ..+....+.|+++|++++...
T Consensus 233 ~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 GQGVDIILDMIGA------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SSCEEEEEESCCG------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCCH------HHHHHHHHHhccCCEEEEEEe
Confidence 3479998865432 256677889999999887643
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.24 E-value=0.0091 Score=51.31 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=67.1
Q ss_pred HHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC-CC--CCCCCC
Q psy2408 81 INKTSITKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL-NL--PFDNDS 156 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~~ 156 (298)
+...++.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++..+-. ++ ... +.
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 172 LVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp HHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSC-SC
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhh-cC
Confidence 3446788999999999864 7777777777799999999999888887653 321 22222111 11 111 47
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+-..... .+..+..+.++|+++|+++....
T Consensus 244 ~D~vid~~g~~---~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 244 FDLIVVCASSL---TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp EEEEEECCSCS---TTCCTTTGGGGEEEEEEEEECCC
T ss_pred CCEEEECCCCC---cHHHHHHHHHHhcCCCEEEEecC
Confidence 99997543320 01234567789999999887543
No 355
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.20 E-value=0.025 Score=47.81 Aligned_cols=88 Identities=11% Similarity=0.066 Sum_probs=62.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcC--Ce-E-EEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC---CCCCCeeEE
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKG--CR-V-DGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---FDNDSFDGG 160 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~--~~-v-~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V 160 (298)
...+++|+-||.|.++.-+.+ .| .+ + .++|+++..++..+.++.. . +++.|+.++. ++...+|++
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYER-SSININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHH-SSCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCCEEEEECCChhHHHHHHHH-cCCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHHhccCCCCEE
Confidence 346999999999999988887 44 34 5 6999999998888877632 1 5678888874 222368999
Q ss_pred Eeccccccc-----------ChH--HHHHHHhh-ccc
Q psy2408 161 WFFESIFHM-----------NHS--AALNEARR-VLK 183 (298)
Q Consensus 161 ~~~~~l~~~-----------~~~--~~l~~~~r-~Lk 183 (298)
+...-...+ .++ .++.++.+ +++
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 975444433 233 56777777 553
No 356
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.17 E-value=0.031 Score=47.55 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=66.4
Q ss_pred CCCCCCCeEEEeCC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--------CC
Q psy2408 84 TSITKGQRFIDIGC--GFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--------FD 153 (298)
Q Consensus 84 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~ 153 (298)
.++.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. .++ |..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD---ETV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC---EEE--cCCcccHHHHHHHHhC
Confidence 47788999999998 457888888887789999999999988887643 321 122 222211 11
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+.. . ..+..+.++|+++|+++....
T Consensus 233 ~~~~d~vi~~~g-~-----~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 233 GKGADKVVDHTG-A-----LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTCEEEEEESSC-S-----SSHHHHHHHEEEEEEEEESSC
T ss_pred CCCceEEEECCC-H-----HHHHHHHHhhccCCEEEEEec
Confidence 247999986543 1 356677889999999887543
No 357
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.028 Score=48.05 Aligned_cols=98 Identities=16% Similarity=0.254 Sum_probs=65.3
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------CCC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------PFD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~ 153 (298)
+..++.++.+||-.|+ | .|..+..+++..|++|++++.+++.++.+++. +.. .++..+-.++ ...
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~~~d~~~~~~~~~~~~~~~ 236 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAH---EVFNHREVNYIDKIKKYVG 236 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEEETTSTTHHHHHHHHHC
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CCC---EEEeCCCchHHHHHHHHcC
Confidence 4567889999999997 3 46667777776789999999999887766432 321 1222211111 011
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
...+|+|+.+..- ..+....++|+++|++++..
T Consensus 237 ~~~~D~vi~~~G~------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLAN------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCHH------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCCh------HHHHHHHHhccCCCEEEEEe
Confidence 2369999765432 35667889999999988764
No 358
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.14 E-value=0.027 Score=50.00 Aligned_cols=97 Identities=15% Similarity=0.156 Sum_probs=67.1
Q ss_pred CCCCCCCeEEEeCC-CC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------
Q psy2408 84 TSITKGQRFIDIGC-GF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---------- 151 (298)
Q Consensus 84 ~~~~~~~~vLDiGc-G~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 151 (298)
..+.++.+||-+|+ |. |..+..+++..|+++++++.+++.++.+++. |.. .++...-.++.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccch
Confidence 57789999999997 53 7888888887899999999999888888654 321 22222111110
Q ss_pred -------------CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 -------------FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 -------------~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.....+|+|+-+- .. ..+....++|+++|++++...
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~-----G~-~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHP-----GR-ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECS-----CH-HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcC-----Cc-hhHHHHHHHhhCCcEEEEEec
Confidence 1124799887432 22 567788899999999988543
No 359
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.13 E-value=0.03 Score=47.63 Aligned_cols=101 Identities=17% Similarity=0.098 Sum_probs=67.4
Q ss_pred HHHhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC-CCCCCC-----
Q psy2408 80 MINKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHG-DALNLP----- 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~-d~~~~~----- 151 (298)
+.+..++.++.+||-.|+ | .|..+..+++..|++|+++|.+++.++.+++. .|.. .++.. +..++.
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAFNYKEESDLTAALKR 220 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEEETTSCSCSHHHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEEecCCHHHHHHHHHH
Confidence 335677889999999997 3 47777777776789999999999887777532 2321 12221 111110
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
...+.+|+|+.+.. . ..+....++|+++|++++..
T Consensus 221 ~~~~~~d~vi~~~g-----~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 221 CFPNGIDIYFENVG-----G-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HCTTCEEEEEESSC-----H-HHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCcEEEECCC-----H-HHHHHHHHHHhcCCEEEEEc
Confidence 01246999875433 2 46788889999999988754
No 360
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.12 E-value=0.015 Score=54.61 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=79.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-------------CCeEEEEeC---CHHHHHHHHH-----------HHHhcC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-------------GCRVDGITI---SKFQQESAMK-----------TAKAEG----- 135 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-------------~~~v~~vD~---s~~~l~~a~~-----------~~~~~~----- 135 (298)
+..+|+|+|.|+|.....+.+.. ..+++.++. +.+.+..+-. ......
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45799999999999877765531 146899998 5555554322 222111
Q ss_pred -----CC---CceEEEECCCCCC-C-CC---CCCeeEEEecccccc-cChH---HHHHHHhhcccCCcEEEEEeCCCCCC
Q psy2408 136 -----LL---DKVNFLHGDALNL-P-FD---NDSFDGGWFFESIFH-MNHS---AALNEARRVLKSGSILTLTDLPLLSV 198 (298)
Q Consensus 136 -----~~---~~i~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~-~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~ 198 (298)
+. -.+++..+|+.+. + ++ +..+|+++.-..--. -++. .++..+.++++|||.+.-. .
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~---- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF--T---- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES--C----
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec--c----
Confidence 01 1456777887542 2 22 468999987442211 1222 8999999999999986532 1
Q ss_pred CCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 199 SKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
....+++.|.++||.+....
T Consensus 212 --------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 --------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp --------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred --------------------CcHHHHHHHHhCCeEEEecc
Confidence 12367788899999887755
No 361
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.11 E-value=0.021 Score=49.36 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=53.9
Q ss_pred CeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC--------CCCCeeEE
Q psy2408 90 QRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF--------DNDSFDGG 160 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~fD~V 160 (298)
.+|||+-||.|.++.-+.+ .|. .+.++|+++..++..+.++. +..++++|+.++.. ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~-aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR-AGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH-HTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHH-CCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 5899999999999998887 466 46799999998887776642 36788899887631 23679999
Q ss_pred Eecccc
Q psy2408 161 WFFESI 166 (298)
Q Consensus 161 ~~~~~l 166 (298)
+...-.
T Consensus 76 ~ggpPC 81 (376)
T 3g7u_A 76 IGGPPC 81 (376)
T ss_dssp EECCCC
T ss_pred EecCCC
Confidence 975443
No 362
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.034 Score=46.94 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=66.0
Q ss_pred HhCCCCCCCeEEEeCC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------CCC
Q psy2408 82 NKTSITKGQRFIDIGC--GFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------PFD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~ 153 (298)
+..++.++.+||-.|+ |.|..+..+++..|++|+++|.+++.++.+++. +.. .++..+-.+. ...
T Consensus 134 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 134 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW---QVINYREEDLVERLKEITG 206 (327)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCCccHHHHHHHHhC
Confidence 3567889999999993 346666667766789999999999888877653 321 1222111111 011
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+.. ...++.+.++|+++|++++...
T Consensus 207 ~~~~D~vi~~~g------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 207 GKKVRVVYDSVG------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp TCCEEEEEECSC------GGGHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCc------hHHHHHHHHHhcCCCEEEEEec
Confidence 246999986543 2456778899999999887643
No 363
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.08 E-value=0.064 Score=46.24 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=44.6
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc--------CCeEEEEeCCHHHHHHHHHHHH
Q psy2408 68 NFAQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK--------GCRVDGITISKFQQESAMKTAK 132 (298)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~v~~vD~s~~~l~~a~~~~~ 132 (298)
.+.+...+....+.+.++.+.+.+|+|+|.|.|.++..+.+.. ..+++.||+|+...+.-++.+.
T Consensus 60 ~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 60 MFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3444444444444455655556689999999999988776531 2489999999988776555543
No 364
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.08 E-value=0.02 Score=53.53 Aligned_cols=125 Identities=17% Similarity=0.117 Sum_probs=78.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc-----------C--CeEEEEeC---CHHHHHHHHH-----------HHHhcCC--C-
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK-----------G--CRVDGITI---SKFQQESAMK-----------TAKAEGL--L- 137 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~-----------~--~~v~~vD~---s~~~l~~a~~-----------~~~~~~~--~- 137 (298)
+.-+|||+|.|+|.......+.. . .++++++. +.+.+..+-. ....... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44699999999999877664431 1 36899998 7777764433 1211111 0
Q ss_pred ----------CceEEEECCCCCC-C-CC---CCCeeEEEeccccccc-ChH---HHHHHHhhcccCCcEEEEEeCCCCCC
Q psy2408 138 ----------DKVNFLHGDALNL-P-FD---NDSFDGGWFFESIFHM-NHS---AALNEARRVLKSGSILTLTDLPLLSV 198 (298)
Q Consensus 138 ----------~~i~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~~-~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~ 198 (298)
-.+++..+|+.+. + ++ ...||+++.-..--.. ++. .+++.+.++++|||.+.-...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~----- 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS----- 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCC-----
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccC-----
Confidence 1244566776542 1 11 3679999874422222 222 899999999999998654211
Q ss_pred CCChhHHHHHHHhhcccCCCCcchHHHHHHhCCCcEEEEE
Q psy2408 199 SKNDNKFKEYVKKNIHSNFILVEHYPDLLNKSGFELIKID 238 (298)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 238 (298)
...+++.|.++||.+....
T Consensus 221 ---------------------~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 221 ---------------------AGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ---------------------CHHHHHHHHHHTCEEEEEE
T ss_pred ---------------------cHHHHHHHHhCCeEEEecc
Confidence 1356778888898877654
No 365
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.07 E-value=0.033 Score=47.67 Aligned_cols=99 Identities=12% Similarity=-0.030 Sum_probs=65.5
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------CCC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------PFD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~ 153 (298)
+..++.++.+||-.|+ | .|..+..++...|++|+++|.+++.++.+++. +.. .++..+-.+. ...
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEEecCChHHHHHHHHHhc
Confidence 5567889999999984 3 46666677776789999999999888887543 321 1222211111 012
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+|+|+.+..- ..+....++|+++|++++...
T Consensus 229 ~~~~d~vi~~~G~------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 229 GAGVNLILDCIGG------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TSCEEEEEESSCG------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCceEEEECCCc------hHHHHHHHhccCCCEEEEEec
Confidence 2469998765432 245677889999999887644
No 366
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.06 E-value=0.00076 Score=57.72 Aligned_cols=97 Identities=15% Similarity=0.193 Sum_probs=65.0
Q ss_pred hCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CCCC
Q psy2408 83 KTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FDND 155 (298)
Q Consensus 83 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 155 (298)
..++ ++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. . + .++..+-.++. ....
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhcCC
Confidence 6677 999999999864 6777777777788 999999998877766542 1 1 12211111110 0024
Q ss_pred CeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 156 SFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.+|+|+-.- ..+..++...++|+++|+++....
T Consensus 231 g~D~vid~~-----g~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 231 GVEVLLEFS-----GNEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp CEEEEEECS-----CCHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCEEEECC-----CCHHHHHHHHHHHhcCCEEEEEec
Confidence 699986432 334577888999999999887543
No 367
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.012 Score=50.35 Aligned_cols=100 Identities=20% Similarity=0.244 Sum_probs=67.1
Q ss_pred HHHhCCCCCCCeEEEeCCC--CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC---CCC---
Q psy2408 80 MINKTSITKGQRFIDIGCG--FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL---NLP--- 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~---~~~--- 151 (298)
.+....+.++.+||-+|++ .|..+..+++..|++|+++|.+++.++.+++ .+.. .++ |.. ++.
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~ 231 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAV 231 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHH
Confidence 3455577899999999983 4666767777678999999999887776654 2321 122 332 110
Q ss_pred --CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 --FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 --~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+.+|+|+.+.. ....++.+.+.|+++|+++....
T Consensus 232 ~~~~~~~~D~vi~~~g-----~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 232 LKATDGGAHGVINVSV-----SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHHTSCEEEEEECSS-----CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HHHhCCCCCEEEECCC-----cHHHHHHHHHHHhcCCEEEEEeC
Confidence 00126899875433 23678889999999999887644
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.96 E-value=0.055 Score=46.01 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=70.8
Q ss_pred HHHHHHhCCCCCCCeEEEeCCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC---
Q psy2408 77 SRIMINKTSITKGQRFIDIGCGF-GLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--- 151 (298)
Q Consensus 77 ~~~l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--- 151 (298)
.........+.++.+||-.|+|. |.++..+++..|+ .++++|.+++.++.+++. |.. .++...-.+.+
T Consensus 149 ~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~---~~i~~~~~~~~~~~ 221 (346)
T 4a2c_A 149 GLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM---QTFNSSEMSAPQMQ 221 (346)
T ss_dssp HHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHH
T ss_pred HHHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe---EEEeCCCCCHHHHH
Confidence 34456677788999999999986 6667777776776 568999999988887654 422 23322211110
Q ss_pred ---CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeCC
Q psy2408 152 ---FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 152 ---~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.....+|+|+- ....+..+....++|+++|++++....
T Consensus 222 ~~~~~~~g~d~v~d-----~~G~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 222 SVLRELRFNQLILE-----TAGVPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HHHGGGCSSEEEEE-----CSCSHHHHHHHHHHCCTTCEEEECCCC
T ss_pred HhhcccCCcccccc-----cccccchhhhhhheecCCeEEEEEecc
Confidence 11245777653 233446788889999999999886544
No 369
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.95 E-value=0.063 Score=45.40 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=66.7
Q ss_pred HhCCCCCCCeEEEeCC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--------
Q psy2408 82 NKTSITKGQRFIDIGC--GFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-------- 151 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-------- 151 (298)
+..++.++.+||-.|+ |.|..+..++...|++|+++|.+++.++.+++. +.. .++ |..+..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTI--NYSTQDFAEVVREI 209 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCHHHHHHHHHH
Confidence 4567889999999995 457777777776789999999999888877653 321 122 222211
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.....+|+|+.+..- ..++.+.++|+++|+++....
T Consensus 210 ~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HTTCCEEEEEECSCT------TTHHHHHHTEEEEEEEEECCC
T ss_pred hCCCCCeEEEECCcH------HHHHHHHHhhccCCEEEEEec
Confidence 112469999865432 356778899999999887644
No 370
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.90 E-value=0.66 Score=43.45 Aligned_cols=164 Identities=15% Similarity=0.131 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHh-c--------CCeEEEEeCCHHHHHHHHHHHHhcC-------
Q psy2408 72 GSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKA-K--------GCRVDGITISKFQQESAMKTAKAEG------- 135 (298)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--------~~~v~~vD~s~~~l~~a~~~~~~~~------- 135 (298)
+.+.+++.+++.....+...|+-+|||.=.....+... . +.+++=+|..+ .++.=++.+....
T Consensus 91 ~~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~-v~~~K~~~l~~~~~l~~~~~ 169 (695)
T 2zwa_A 91 AIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSD-LLKIKIELIKTIPELSKIIG 169 (695)
T ss_dssp HHHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHH-HHHHHHHHHHHCHHHHHHTT
T ss_pred HHHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHH-HHHHHHHHHHcChHHHHhhc
Confidence 34556666665541124569999999998888888653 1 33555556533 3332222232110
Q ss_pred -------CC---------CceEEEECCCCCCC----------C-CCCCeeEEEecccccccChH---HHHHHHhhcccCC
Q psy2408 136 -------LL---------DKVNFLHGDALNLP----------F-DNDSFDGGWFFESIFHMNHS---AALNEARRVLKSG 185 (298)
Q Consensus 136 -------~~---------~~i~~~~~d~~~~~----------~-~~~~fD~V~~~~~l~~~~~~---~~l~~~~r~Lkpg 185 (298)
.. ++..++..|+.+.. + ..+..-++++-.++.+++.. .+|+.+.+. |+
T Consensus 170 ~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~ 247 (695)
T 2zwa_A 170 LSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--EN 247 (695)
T ss_dssp CCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SS
T ss_pred cccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CC
Confidence 00 36789999998731 2 33455677888999999887 888888764 67
Q ss_pred cEEEEEeCCCCCCCCChhHHHH---HHHhh-----cccCCCCcchHHHHHHhCCCcEEEEEe
Q psy2408 186 SILTLTDLPLLSVSKNDNKFKE---YVKKN-----IHSNFILVEHYPDLLNKSGFELIKIDD 239 (298)
Q Consensus 186 G~l~i~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 239 (298)
|.+++.+...+.... ...... ..... ....+.++++..+.|.++||..+...+
T Consensus 248 ~~~~~~e~~~~~~~~-d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 248 SHFIILEQLIPKGPF-EPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGD 308 (695)
T ss_dssp EEEEEEEECCTTCTT-SHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEE
T ss_pred ceEEEEEeecCCCCC-ChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceee
Confidence 777776654332211 111111 11111 112355688899999999998776654
No 371
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.89 E-value=0.023 Score=48.92 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=63.5
Q ss_pred hCCCC--C-------CCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCH---HHHHHHHHHHHhcCCCCceEEEECCCCC
Q psy2408 83 KTSIT--K-------GQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISK---FQQESAMKTAKAEGLLDKVNFLHGDALN 149 (298)
Q Consensus 83 ~~~~~--~-------~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~---~~l~~a~~~~~~~~~~~~i~~~~~d~~~ 149 (298)
..+++ + +.+||-+|+|. |..+..+++..|++|+++|.++ +.++.+++. |. ..+ | .+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga----~~v--~-~~ 234 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KT----NYY--N-SS 234 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TC----EEE--E-CT
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CC----cee--c-hH
Confidence 55666 7 99999999853 5666666666789999999987 777766543 32 222 2 22
Q ss_pred CCCC------CCCeeEEEecccccccChHHHH-HHHhhcccCCcEEEEEeC
Q psy2408 150 LPFD------NDSFDGGWFFESIFHMNHSAAL-NEARRVLKSGSILTLTDL 193 (298)
Q Consensus 150 ~~~~------~~~fD~V~~~~~l~~~~~~~~l-~~~~r~LkpgG~l~i~~~ 193 (298)
.+. .+.+|+|+.... .+..+ +.+.++|+++|++++...
T Consensus 235 -~~~~~~~~~~~~~d~vid~~g-----~~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 235 -NGYDKLKDSVGKFDVIIDATG-----ADVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp -TCSHHHHHHHCCEEEEEECCC-----CCTHHHHHHGGGEEEEEEEEECSC
T ss_pred -HHHHHHHHhCCCCCEEEECCC-----ChHHHHHHHHHHHhcCCEEEEEec
Confidence 211 146999875433 22356 889999999999887643
No 372
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.86 E-value=0.041 Score=46.81 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=66.3
Q ss_pred HHhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------C
Q psy2408 81 INKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------F 152 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------~ 152 (298)
.+...+.++.+||-+|+ | .|..+..+++..|++|+++ .+++.++.+++. |. ..+. +-.++. .
T Consensus 143 ~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga----~~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 143 VDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GA----TPID-ASREPEDYAAEHT 212 (343)
T ss_dssp TTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TS----EEEE-TTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CC----CEec-cCCCHHHHHHHHh
Confidence 36778889999999994 4 3788888888789999999 888887777653 32 1222 212110 1
Q ss_pred CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 153 DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
....+|+|+-+.. . ..+....++|+++|+++...
T Consensus 213 ~~~g~D~vid~~g-----~-~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-----G-PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TTSCEEEEEESSC-----T-HHHHHHHHHEEEEEEEEESC
T ss_pred cCCCceEEEECCC-----c-HHHHHHHHHHhcCCeEEEEc
Confidence 2247999875332 1 46777888999999988754
No 373
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=95.76 E-value=0.01 Score=50.33 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=65.7
Q ss_pred HhCCCCCCC-eEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-CCCCCCe
Q psy2408 82 NKTSITKGQ-RFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-PFDNDSF 157 (298)
Q Consensus 82 ~~~~~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~f 157 (298)
...++.++. +||-.|+ | .|..+..+++..|++|++++.+++.++.+++. |...-+.....+.... ....+.+
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEEEHHHHCSSCCCSSCCCCE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcEEEECCCchHHHHHHhhcCCc
Confidence 345677775 8999997 4 37777888887799999999998777777653 3211111101111111 1223569
Q ss_pred eEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 158 DGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 158 D~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
|+|+-+-. . ..+....++|+++|++++...
T Consensus 219 d~vid~~g-----~-~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 219 QGAVDPVG-----G-KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEEESCC-----T-HHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECCc-----H-HHHHHHHHhhcCCCEEEEEec
Confidence 98875432 2 467788899999999887643
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.67 E-value=0.011 Score=50.11 Aligned_cols=99 Identities=15% Similarity=0.245 Sum_probs=64.1
Q ss_pred HhCCCCCCC-eEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEC-CC-CC-C-CCCC
Q psy2408 82 NKTSITKGQ-RFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHG-DA-LN-L-PFDN 154 (298)
Q Consensus 82 ~~~~~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~-d~-~~-~-~~~~ 154 (298)
...++.++. +||-+|+ | .|..+..+++..|++|++++.+++.++.+++. |.. .++.. +. .+ . ....
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL----GAK---EVLAREDVMAERIRPLDK 214 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT----TCS---EEEECC---------CCS
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CCc---EEEecCCcHHHHHHHhcC
Confidence 445677775 8999997 4 47778888887799999999998877777542 322 11211 11 01 1 1223
Q ss_pred CCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 155 DSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+.+|+|+-+-. . ..+....++|+++|++++...
T Consensus 215 ~~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 215 QRWAAAVDPVG-----G-RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CCEEEEEECST-----T-TTHHHHHHTEEEEEEEEECSC
T ss_pred CcccEEEECCc-----H-HHHHHHHHhhccCCEEEEEee
Confidence 47999875432 1 256678889999999887543
No 375
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.27 E-value=0.0088 Score=51.33 Aligned_cols=101 Identities=26% Similarity=0.295 Sum_probs=64.6
Q ss_pred HHhCCCC-CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC-CCC-CCCCCC
Q psy2408 81 INKTSIT-KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA-LNL-PFDNDS 156 (298)
Q Consensus 81 ~~~~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~-~~~-~~~~~~ 156 (298)
+....+. ++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. .|.. .++..+- ..+ .. .+.
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~---~vi~~~~~~~~~~~-~~g 244 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGAD---DYVIGSDQAKMSEL-ADS 244 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCS---CEEETTCHHHHHHS-TTT
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCc---eeeccccHHHHHHh-cCC
Confidence 4456677 899999999875 7777777777799999999998777666522 2322 1222110 001 01 146
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+-.-.- +..+....++|+++|+++....
T Consensus 245 ~D~vid~~g~-----~~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 245 LDYVIDTVPV-----HHALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEEEECCCS-----CCCSHHHHTTEEEEEEEEECSC
T ss_pred CCEEEECCCC-----hHHHHHHHHHhccCCEEEEeCC
Confidence 9998743321 1235567789999999887643
No 376
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.19 E-value=0.061 Score=47.54 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=66.0
Q ss_pred CCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----------
Q psy2408 84 TSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL----------- 150 (298)
Q Consensus 84 ~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~----------- 150 (298)
.++.++.+||-.|+ | .|..+..+++..|+++++++.+++.++.+++. |...-+.....|+...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL----GCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCCEEEecccccccccccccccccchh
Confidence 67889999999997 4 37777788887799999999999888877543 4321111111121100
Q ss_pred ---------CCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 151 ---------PFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 151 ---------~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
......+|+|+-+... ..+....++|+++|++++...
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G~------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTGR------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSCH------HHHHHHHHHSCTTCEEEESCC
T ss_pred hhHHHHHHHHHhCCCceEEEECCCc------hHHHHHHHHHhcCCEEEEEec
Confidence 0002468998754332 356778889999999888643
No 377
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.14 E-value=0.16 Score=36.96 Aligned_cols=90 Identities=12% Similarity=0.011 Sum_probs=56.5
Q ss_pred CCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEEec
Q psy2408 89 GQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGWFF 163 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~~~ 163 (298)
..+|+=+|||. |..........|..|+++|.+++.++.+++ . .+.++.+|..+.. ..-..+|+|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 35899999864 433333333358899999999988877654 2 2678889987631 112467887653
Q ss_pred ccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 164 ESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 164 ~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
+++. ..+-...+.+.|+..++..
T Consensus 79 -----~~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 79 -----IPNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp -----CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred -----CCChHHHHHHHHHHHHHCCCCeEEEE
Confidence 2333 3344456667788876654
No 378
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.11 E-value=0.054 Score=45.79 Aligned_cols=67 Identities=24% Similarity=0.142 Sum_probs=50.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC-CCCeeEEEecc
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD-NDSFDGGWFFE 164 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~V~~~~ 164 (298)
+.++||+.||.|.++..+.. .|. .+.++|+++..++..+.++... . ++|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~-aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES-CGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH-TTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHH-CCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECC
Confidence 56999999999999998887 455 5888999999999888886421 1 5777765311 13589998743
No 379
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=95.02 E-value=0.015 Score=50.27 Aligned_cols=94 Identities=19% Similarity=0.069 Sum_probs=60.3
Q ss_pred CCCCCeEEEeC-CCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC---CCCCCeeEE
Q psy2408 86 ITKGQRFIDIG-CGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---FDNDSFDGG 160 (298)
Q Consensus 86 ~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V 160 (298)
+.++.+||-.| +|. |..+..+++..|++|++++ +++.++.+++ .|.. .++..+-.++. .....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGAD---DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCC---EEEECCchHHHHHHhhcCCCCEE
Confidence 78899999999 453 7888888887789999998 6666655532 3422 22222111110 011468988
Q ss_pred EecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 161 WFFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 161 ~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+-+. ... ..+....++|+++|+++...
T Consensus 253 id~~-----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 253 LDNV-----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EESS-----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred EECC-----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 6432 333 45677888999999988754
No 380
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.98 E-value=0.12 Score=44.17 Aligned_cols=100 Identities=17% Similarity=0.103 Sum_probs=66.6
Q ss_pred HHHhCCCCCC--CeEEEeCC-C-CCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC---
Q psy2408 80 MINKTSITKG--QRFIDIGC-G-FGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--- 151 (298)
Q Consensus 80 l~~~~~~~~~--~~vLDiGc-G-~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--- 151 (298)
+.+..++.++ .+||-.|+ | .|..+..+++..|+ +|+++|.+++.++.+++. .+.. .++ |..+..
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAI--NYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEE--ETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCchHHHH
Confidence 3366778889 99999998 3 36666666766788 999999998777766542 2321 122 222211
Q ss_pred ----CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 ----FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ----~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+.+|+|+.+..- ..+..+.++|+++|++++...
T Consensus 222 ~~~~~~~~~~d~vi~~~G~------~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVGG------NISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHCTTCEEEEEESCCH------HHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhcCCCCCEEEECCCH------HHHHHHHHHhccCcEEEEECC
Confidence 011269998765431 567788899999999887543
No 381
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.86 E-value=0.017 Score=49.71 Aligned_cols=101 Identities=26% Similarity=0.252 Sum_probs=63.5
Q ss_pred HHhCCCC-CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC-CC-CCCCCC
Q psy2408 81 INKTSIT-KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL-NL-PFDNDS 156 (298)
Q Consensus 81 ~~~~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~-~~-~~~~~~ 156 (298)
+....+. ++.+||-+|+|. |..+..+++..|++|++++.+++.++.+++. .|.. .++..+-. .+ .. .+.
T Consensus 179 l~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~-~~~ 251 (366)
T 1yqd_A 179 LKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAA-AGT 251 (366)
T ss_dssp HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHT-TTC
T ss_pred HHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHh-hCC
Confidence 3455677 899999999864 6667777776789999999998777665532 2321 22221100 01 01 146
Q ss_pred eeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+...... ..++...++|+++|+++....
T Consensus 252 ~D~vid~~g~~-----~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 252 LDGIIDTVSAV-----HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EEEEEECCSSC-----CCSHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCcH-----HHHHHHHHHHhcCCEEEEEcc
Confidence 99987543221 234566788999999887543
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.69 E-value=0.026 Score=47.08 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=62.9
Q ss_pred hCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC-CCC--CCCCCCe
Q psy2408 83 KTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA-LNL--PFDNDSF 157 (298)
Q Consensus 83 ~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~-~~~--~~~~~~f 157 (298)
.. +.++.+||-+|+ | .|..+..+++..|++|+++|.+++.++.+++ .|.. .++..+- .++ .. +.+
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~--~~~ 190 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW--GGL 190 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT--TSE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh--cCc
Confidence 44 789999999997 3 4777777887778999999999888777754 2321 2222110 111 01 569
Q ss_pred eEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 158 DGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 158 D~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
|+|+. ..- ..++...++|+++|+++....
T Consensus 191 d~vid-~g~------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 191 DLVLE-VRG------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEEEE-CSC------TTHHHHHTTEEEEEEEEEC--
T ss_pred eEEEE-CCH------HHHHHHHHhhccCCEEEEEeC
Confidence 99876 322 356778899999999887543
No 383
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.58 E-value=0.16 Score=43.65 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=61.6
Q ss_pred CCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----CCCCCCeeE
Q psy2408 87 TKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----PFDNDSFDG 159 (298)
Q Consensus 87 ~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~ 159 (298)
.++.+||-+|+ | .|..+..+++..|++|+++. +++.++.+++. |.. .++...-.++ ....+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR----GAE---EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TCS---EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc----CCc---EEEECCCchHHHHHHHHccCCccE
Confidence 78899999998 3 58888888887899999885 77777766543 431 2333221211 011245898
Q ss_pred EEecccccccChHHHHHHHhhcc-cCCcEEEEEe
Q psy2408 160 GWFFESIFHMNHSAALNEARRVL-KSGSILTLTD 192 (298)
Q Consensus 160 V~~~~~l~~~~~~~~l~~~~r~L-kpgG~l~i~~ 192 (298)
|+- ....+..+..+.+.| +++|+++...
T Consensus 235 v~d-----~~g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALD-----CITNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEE-----SSCSHHHHHHHHHHSCTTCEEEEESS
T ss_pred EEE-----CCCchHHHHHHHHHhhcCCCEEEEEe
Confidence 863 333445677788888 6999988754
No 384
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=94.50 E-value=0.092 Score=44.90 Aligned_cols=98 Identities=15% Similarity=0.111 Sum_probs=57.8
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEE-eCCHH---HHHHHHHHHHhcCCCCceEEEEC------CCCC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGI-TISKF---QQESAMKTAKAEGLLDKVNFLHG------DALN 149 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~v-D~s~~---~l~~a~~~~~~~~~~~~i~~~~~------d~~~ 149 (298)
...++.++.+||-+|+ | .|..+..+++..|++++++ +.++. ..+.++ ..|.. .++.. ++.+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKN 233 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHH
Confidence 4467889999999997 4 4888888888778876555 44322 234443 33432 22221 1222
Q ss_pred CCCCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 150 LPFDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 150 ~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
+.-..+.+|+|+-. ...+.+ ....++|+++|++++..
T Consensus 234 ~~~~~~~~Dvvid~-----~g~~~~-~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 234 FFKDMPQPRLALNC-----VGGKSS-TELLRQLARGGTMVTYG 270 (357)
T ss_dssp TTSSSCCCSEEEES-----SCHHHH-HHHHTTSCTTCEEEECC
T ss_pred HHhCCCCceEEEEC-----CCcHHH-HHHHHhhCCCCEEEEEe
Confidence 21111248988642 333323 45789999999988753
No 385
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.37 E-value=0.24 Score=43.23 Aligned_cols=61 Identities=18% Similarity=0.128 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc------CCeEEEEeCCHHHHHHHHHHHHh
Q psy2408 70 AQGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK------GCRVDGITISKFQQESAMKTAKA 133 (298)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~~vD~s~~~l~~a~~~~~~ 133 (298)
.+...+....+.+..+ ..+|+|+|.|+|.++..+.+.. ..+++.||+|+.+.+.-++++..
T Consensus 122 Ge~la~~~~~~~~~~g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 122 AQTLARPVAQALDASG---TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC---CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3333344444444443 4699999999999988886542 24899999999887777766653
No 386
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.24 E-value=0.023 Score=48.81 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=59.6
Q ss_pred CCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccccc
Q psy2408 89 GQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIF 167 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 167 (298)
+.+||=+|+|. |..+..++...|++|+++|.+++.++.+.+.... .+.....+..++.-.-..+|+|+..-...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 47999999964 5555555665788999999999888887765432 12222221111100012589998654332
Q ss_pred ccChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 168 HMNHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 168 ~~~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
....+ -+.+...+.++|||.++....
T Consensus 242 ~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 242 GRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 21122 224456678899997766433
No 387
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.02 E-value=0.35 Score=36.74 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=54.0
Q ss_pred CCeEEEeCCCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC----CC-CCCCeeEEE
Q psy2408 89 GQRFIDIGCGF-GLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL----PF-DNDSFDGGW 161 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~----~~-~~~~fD~V~ 161 (298)
+.+|+=+|||. |.......... |..|+++|.+++.++.++. .+ +.++.+|..+. .. .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899998764 43333333335 8899999999987766543 23 45677776542 11 134688887
Q ss_pred ecccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 162 FFESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 162 ~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
..- ++. ..+-...+.+.|++.++..
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 632 222 3333455556777777664
No 388
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.00 E-value=1.1 Score=31.81 Aligned_cols=89 Identities=19% Similarity=0.094 Sum_probs=51.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEE
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGW 161 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 161 (298)
+++|+=+|+ |.++..+++. .+.+|+++|.+++.++...+. . .+.++.+|..+.. ..-..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 468888887 5555555443 478999999998776655432 1 2456777765421 1124689887
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
..-.- ... ..+..+.+.+.++ .+++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 75 AVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 65221 111 4444555667775 4444
No 389
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.70 E-value=0.022 Score=49.28 Aligned_cols=100 Identities=16% Similarity=0.063 Sum_probs=57.5
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
++.+|+=+|+|. |.....++...|++|+++|.++..++.+++.+ +. .+.....+..++.-.-..+|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999964 55555555557899999999998877766532 21 1212111111110001257888764322
Q ss_pred cccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 167 FHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 167 ~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
.....+ -+.++..+.++|||.++...
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 211222 23456678899999876543
No 390
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.70 E-value=0.78 Score=37.35 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=51.8
Q ss_pred CeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 90 QRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
++||=.|+ |.++..+++. .|.+|++++.++........ .+++++.+|+.++. -..+|+|+.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCCc
Confidence 58999994 8888888776 37899999998765443321 24889999998866 4678999876665
Q ss_pred cccChH
Q psy2408 167 FHMNHS 172 (298)
Q Consensus 167 ~~~~~~ 172 (298)
....++
T Consensus 74 ~~~~~~ 79 (286)
T 3ius_A 74 DSGGDP 79 (286)
T ss_dssp BTTBCH
T ss_pred cccccH
Confidence 444333
No 391
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=93.62 E-value=0.049 Score=46.67 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=59.1
Q ss_pred CCCCCC-CeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHH----HHHHHHHHHhcCCCCceEEEEC------CCCC-
Q psy2408 84 TSITKG-QRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQ----QESAMKTAKAEGLLDKVNFLHG------DALN- 149 (298)
Q Consensus 84 ~~~~~~-~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~----l~~a~~~~~~~~~~~~i~~~~~------d~~~- 149 (298)
.++.++ .+||-.|+ | .|..+..+++..|++++++.-+.+. .+.++ ..|.. .++.. |+.+
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~ 234 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK----ELGAT---QVITEDQNNSREFGPT 234 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH----HHTCS---EEEEHHHHHCGGGHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH----hcCCe---EEEecCccchHHHHHH
Confidence 477889 99999997 5 3788888888779998888654432 33333 23432 22221 1110
Q ss_pred C-CC---CCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 150 L-PF---DNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 150 ~-~~---~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+ .. ....+|+|+-+ .....+. ...++|+++|+++....
T Consensus 235 i~~~t~~~~~g~Dvvid~-----~G~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 235 IKEWIKQSGGEAKLALNC-----VGGKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHHHHHTCCEEEEEES-----SCHHHHH-HHHHTSCTTCEEEECCC
T ss_pred HHHHhhccCCCceEEEEC-----CCchhHH-HHHHHhccCCEEEEecC
Confidence 0 00 12469998643 3333333 66799999999887543
No 392
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.52 E-value=0.86 Score=39.17 Aligned_cols=110 Identities=13% Similarity=0.109 Sum_probs=71.1
Q ss_pred HHHHHHhCCC-CCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCC-ceEEEECCCCCCCCCC
Q psy2408 77 SRIMINKTSI-TKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLD-KVNFLHGDALNLPFDN 154 (298)
Q Consensus 77 ~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~ 154 (298)
-+.+++.+.. ..+.+||.++.+.|.++..++.. .++.+.-|--.....+.++..++++. .+++... ...+ .
T Consensus 26 d~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~---~ 98 (375)
T 4dcm_A 26 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TADY---P 98 (375)
T ss_dssp HHHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSCC---C
T ss_pred HHHHHHhhhhccCCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cccc---c
Confidence 3445555432 24568999999999999888752 34555446666677777788777754 3555433 2222 3
Q ss_pred CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
..||+|+.... -+.... ..|..+...|+||+.+++....
T Consensus 99 ~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 99 QQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred cCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 67999875222 111222 7788889999999998876543
No 393
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.49 E-value=0.49 Score=34.13 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=44.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEE
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGW 161 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 161 (298)
..+|+-+||| .++..+++. .|.+|+++|.+++.++.++.. .+.++.+|..+.. ..-..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4589999985 455555543 488999999999877766532 2567888887631 1224688887
Q ss_pred ec
Q psy2408 162 FF 163 (298)
Q Consensus 162 ~~ 163 (298)
..
T Consensus 76 ~~ 77 (141)
T 3llv_A 76 IT 77 (141)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 394
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.38 E-value=0.21 Score=41.51 Aligned_cols=70 Identities=14% Similarity=0.012 Sum_probs=52.0
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHhcCCe---EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC---C-CCCeeE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKAKGCR---VDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF---D-NDSFDG 159 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~~~~~---v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~-~~~fD~ 159 (298)
..+.+++|+-||.|.++.-+.+ .|.+ +.++|+++...+..+.+.. ...++.+|+.++.. + .+.+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~-aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKD-LGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHH-TTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHH-CCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCE
Confidence 4567999999999999988877 4544 5899999988777665542 24578899988741 1 136899
Q ss_pred EEec
Q psy2408 160 GWFF 163 (298)
Q Consensus 160 V~~~ 163 (298)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9863
No 395
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.19 E-value=0.037 Score=47.67 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=55.2
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
++.+|+-+|+|. |.....++...|++|+++|.++..++.+.+.. +. .+.....+...+.-.-..+|+|+.+-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 457999999853 44444444446899999999998777665432 21 1222211111110001357988765433
Q ss_pred cccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 167 FHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 167 ~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
.....+ -+.++..+.+++||.++...
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 211122 23566778889999876543
No 396
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.15 E-value=0.094 Score=45.49 Aligned_cols=96 Identities=18% Similarity=0.192 Sum_probs=59.0
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC------C---C--CCCC-
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL------N---L--PFDN- 154 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~------~---~--~~~~- 154 (298)
++.+|+-+|+|. |..+..++...|++|+++|.++..++.+++. | ..++..+.. . . .+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~----G----~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL----G----AKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT----T----CEECCCCC-----------------CH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----C----Cceeecccccccccccccchhhhcchh
Confidence 568999999986 6667677776799999999999877777542 2 122221110 0 0 0000
Q ss_pred -------------CCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEE
Q psy2408 155 -------------DSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 155 -------------~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~ 191 (298)
...|+|+....+.--+.+ -+-+++.+.+|||..++-.
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 357999864332221223 3446888899999876543
No 397
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.03 E-value=0.35 Score=42.21 Aligned_cols=94 Identities=18% Similarity=0.094 Sum_probs=60.9
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEEe
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGWF 162 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~~ 162 (298)
...+|+=+|+|. |..........|..|+++|.+++.++.++.. + +.++.+|+.+.. ..-...|+|++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----g----~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----G----MKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----T----CCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----C----CeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 345788888864 4333333333588999999999998877632 3 567899988741 12356888765
Q ss_pred cccccccChH---HHHHHHhhcccCCcEEEEEeCC
Q psy2408 163 FESIFHMNHS---AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 163 ~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.- ++. ..+....+-+.|...++.-...
T Consensus 75 ~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 75 AI-----DDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp CC-----SSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CC-----CChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 32 233 5556666777888777765433
No 398
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.85 E-value=0.037 Score=46.10 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=39.6
Q ss_pred ceEEEECCCCCC--CCCCCCeeEEEeccccccc--------------------ChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 139 KVNFLHGDALNL--PFDNDSFDGGWFFESIFHM--------------------NHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 139 ~i~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~--------------------~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
++.++++|..+. .+++++||+|++.--.... ... .+++++.++|+|||.+++...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 578999998763 3567899999986443211 111 567899999999999988643
No 399
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.67 E-value=0.094 Score=44.65 Aligned_cols=99 Identities=13% Similarity=0.016 Sum_probs=59.5
Q ss_pred HHhCCCCCC-CeEEEe-CCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC------
Q psy2408 81 INKTSITKG-QRFIDI-GCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP------ 151 (298)
Q Consensus 81 ~~~~~~~~~-~~vLDi-GcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~------ 151 (298)
++... .++ .+||=. |+|. |..+..+++..|++|+++|.+++.++.+++. |.. .++..+-.++.
T Consensus 157 ~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~ 228 (349)
T 3pi7_A 157 FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA---HVLNEKAPDFEATLREV 228 (349)
T ss_dssp HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS---EEEETTSTTHHHHHHHH
T ss_pred HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCcHHHHHHHHHH
Confidence 33333 445 566644 4442 6666666776799999999999888887653 321 23322211110
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.....+|+|+-+.. . ..+..+.++|+++|++++...
T Consensus 229 ~~~~g~D~vid~~g-----~-~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 229 MKAEQPRIFLDAVT-----G-PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp HHHHCCCEEEESSC-----H-HHHHHHHHHSCTTCEEEECCC
T ss_pred hcCCCCcEEEECCC-----C-hhHHHHHhhhcCCCEEEEEec
Confidence 00136898875432 2 234678899999999988653
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.62 E-value=0.81 Score=38.28 Aligned_cols=79 Identities=20% Similarity=0.118 Sum_probs=56.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||-.|++. .++..+++. .|++|++++.++..++.+...+...+...++.++..|+.+.. + ..
T Consensus 7 ~~k~vlVTGas~-gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGAN-GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTS-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCch-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 466888888664 455555554 488999999999988888777766554346889999998741 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+..+.
T Consensus 86 g~id~lv~nAg~~ 98 (319)
T 3ioy_A 86 GPVSILCNNAGVN 98 (319)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999876653
No 401
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.41 E-value=0.13 Score=43.51 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=50.3
Q ss_pred CeEEEeCCCCCHHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC---CCCCCeeEEEec
Q psy2408 90 QRFIDIGCGFGLSGIRLAKAKG---CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP---FDNDSFDGGWFF 163 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~~~ 163 (298)
.+++|+-||.|.++.-+.+. | ..+.++|+++...+..+.++. ...++..|+.++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 48999999999999888774 4 357899999988887776653 2446788888763 222368999864
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.93 E-value=0.034 Score=47.80 Aligned_cols=95 Identities=19% Similarity=0.177 Sum_probs=58.1
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC--C----------------
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDA--L---------------- 148 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~--~---------------- 148 (298)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+.+. | ..++..+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l----G----a~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV----G----AQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT----T----CEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C----CeEEeccccccccccchhhhhHHHHhh
Confidence 568999999986 6666666666799999999999877776542 2 22222110 0
Q ss_pred ---CCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 149 ---NLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 149 ---~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
.+.-.-...|+|+..-.+-.-+.+ -+-+++.+.+|||+.++-
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 000001568999865322211222 234678888999886554
No 403
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.49 E-value=1.9 Score=35.13 Aligned_cols=101 Identities=17% Similarity=0.091 Sum_probs=67.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCceEEEECCCCCCC-
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITIS------------KFQQESAMKTAKAEGLLDKVNFLHGDALNLP- 151 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s------------~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~- 151 (298)
.+.+||-.|++ |.++..+++. .|++|+.+|.+ ...++.+...+...+ .++.++..|+.+..
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46688888865 4555555554 48899999987 767776666665544 46889999998742
Q ss_pred ----CC-----CCCeeEEEecccccccC-----h------------H-HHHHHHhhcccCCcEEEEE
Q psy2408 152 ----FD-----NDSFDGGWFFESIFHMN-----H------------S-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 152 ----~~-----~~~fD~V~~~~~l~~~~-----~------------~-~~l~~~~r~LkpgG~l~i~ 191 (298)
+. -+..|+++.+..+.... + . .+++.+.+.++.+|.++..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 00 13789998876553321 1 1 4556677777788887765
No 404
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.40 E-value=0.068 Score=46.29 Aligned_cols=42 Identities=26% Similarity=0.335 Sum_probs=33.2
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMK 129 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~ 129 (298)
++.+|+=+|+|. |..+..+++..|++|+++|.++...+.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999986 666666676678999999999876666543
No 405
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=91.30 E-value=0.4 Score=40.91 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=63.5
Q ss_pred CCCCCCCeEEEeCCCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCC------CCCCCCC
Q psy2408 84 TSITKGQRFIDIGCGF-GLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDAL------NLPFDND 155 (298)
Q Consensus 84 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~------~~~~~~~ 155 (298)
.++.++.+||-+|+|. |..+..+++.. |++|+++|.+++.++.+++. |.. .++...-. ++. ...
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~v~~~~-~g~ 253 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL----GAD---HVVDARRDPVKQVMELT-RGR 253 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCHHHHHHHHT-TTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh----CCC---EEEeccchHHHHHHHHh-CCC
Confidence 6788999999999974 66777777777 99999999999888887643 321 22322111 111 123
Q ss_pred CeeEEEecccccccChHH--HHHHHhhcccCCcEEEEEeC
Q psy2408 156 SFDGGWFFESIFHMNHSA--ALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 156 ~fD~V~~~~~l~~~~~~~--~l~~~~r~LkpgG~l~i~~~ 193 (298)
.+|+|+-. ...+. .+....++ ++|+++....
T Consensus 254 g~Dvvid~-----~G~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 254 GVNVAMDF-----VGSQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp CEEEEEES-----SCCHHHHHHGGGGEE--EEEEEEECCC
T ss_pred CCcEEEEC-----CCCchHHHHHHHhhc--CCCEEEEEeC
Confidence 69998643 22333 66667777 8999887644
No 406
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.08 E-value=0.41 Score=40.63 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=57.6
Q ss_pred HHHhCCCCCCCeEEEeCC-C-CCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----C
Q psy2408 80 MINKTSITKGQRFIDIGC-G-FGLSGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----P 151 (298)
Q Consensus 80 l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~ 151 (298)
+.+..++.++.+||=.|+ | .|..+..+++.. +.+|++++ ++...+.++ .+.. .++..+ .++ .
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~---~~~~~~-~~~~~~~~~ 203 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT---HLFDRN-ADYVQEVKR 203 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS---EEEETT-SCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc---EEEcCC-ccHHHHHHH
Confidence 346678889999999998 4 377777777765 46899988 554444443 2321 223311 111 0
Q ss_pred CCCCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEeC
Q psy2408 152 FDNDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...+.+|+|+-+- ..+ .+....++|+++|++++...
T Consensus 204 ~~~~g~Dvv~d~~-----g~~-~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 204 ISAEGVDIVLDCL-----CGD-NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HCTTCEEEEEEEC-----C--------CTTEEEEEEEEEEC-
T ss_pred hcCCCceEEEECC-----Cch-hHHHHHHHhhcCCEEEEECC
Confidence 1235799987532 222 23678899999999988654
No 407
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.91 E-value=1.3 Score=35.61 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC----------CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF----------DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|+.+|.+++.++...+... .++.++..|+.+..- ..
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46788888855 5555555554 48899999999987776665542 358899999887420 01
Q ss_pred CCeeEEEecccccccC------h-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 155 DSFDGGWFFESIFHMN------H-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~------~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+..|+++.+..+.... . . .+.+.+.+.++.+|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 4789998765543221 1 1 34566667777788877653
No 408
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=90.89 E-value=0.44 Score=40.06 Aligned_cols=66 Identities=17% Similarity=0.103 Sum_probs=49.1
Q ss_pred CeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC-CCCeeEEEec
Q psy2408 90 QRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFD-NDSFDGGWFF 163 (298)
Q Consensus 90 ~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~V~~~ 163 (298)
++|||+-||.|.++.-+.+ .|. .+.++|+++...+.-+.+.. -.++.+|+.++... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~-aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHH-TTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhhCCcccEEEec
Confidence 4799999999999988877 455 46799999987777666531 35788999887421 2468998863
No 409
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.74 E-value=0.99 Score=36.35 Aligned_cols=101 Identities=16% Similarity=0.031 Sum_probs=65.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA----KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~----~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.+||-.| |+|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456788666 567777766654 47899999999887777666665543 45889999988741 00
Q ss_pred CCCeeEEEeccccccc-----C--h------------H-HHHHHHhhcccCCcEEEEE
Q psy2408 154 NDSFDGGWFFESIFHM-----N--H------------S-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~-----~--~------------~-~~l~~~~r~LkpgG~l~i~ 191 (298)
.+.+|+|+.+...... . + . .+++.+.+.++++|+++..
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1378999876543221 1 0 1 3455666666667777665
No 410
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.43 E-value=1.8 Score=31.65 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=55.6
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCC-HHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEE
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITIS-KFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGG 160 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s-~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V 160 (298)
..+|+=+|+ |..+..+++. .|..|+++|.+ ++..+....... ..+.++.+|..+.. ..-+..|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 347888876 5666666554 47899999997 554444443321 23788999987531 112467887
Q ss_pred EecccccccChH--HHHHHHhhcccCCcEEEEE
Q psy2408 161 WFFESIFHMNHS--AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 161 ~~~~~l~~~~~~--~~l~~~~r~LkpgG~l~i~ 191 (298)
++.-. .+. ..+....+.+.|...++..
T Consensus 76 i~~~~----~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 76 LALSD----NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EECSS----CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEecC----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 75421 122 4555566666677666653
No 411
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.26 E-value=0.17 Score=42.69 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=39.7
Q ss_pred ceEEEECCCCC-C-CCCCCCeeEEEeccccccc--------------ChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 139 KVNFLHGDALN-L-PFDNDSFDGGWFFESIFHM--------------NHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 139 ~i~~~~~d~~~-~-~~~~~~fD~V~~~~~l~~~--------------~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+..++++|..+ + .+++++||+|++.--.... ... ..+.++.++|+|||.+++..-
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 46788898765 3 2557899999986433221 123 888999999999999988643
No 412
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.94 E-value=3.3 Score=34.02 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=66.0
Q ss_pred CCCeEEEeCCCCC-HHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGCGFG-LSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G-~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.++|-.|++.| .++..+++. .|++|+.++.++...+.+.+.....+ ++.++.+|+.+.. + .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHh
Confidence 5678999997643 244444443 48899999999766666655554433 4788999998741 0 0
Q ss_pred CCCeeEEEecccccc----------cCh-------------H-HHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFH----------MNH-------------S-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~----------~~~-------------~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
-+..|+++.+..+.. ... . .+++.+.+.++.+|+++....
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 147899998765532 111 1 355666677777888776543
No 413
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.91 E-value=0.6 Score=34.37 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=51.4
Q ss_pred CCCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEE
Q psy2408 87 TKGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGW 161 (298)
Q Consensus 87 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 161 (298)
.++.+|+=+|||. |......+...|.+|+++|.+++.++.++. . ....++.+|..+.. ..-..+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 3567999999864 433333333357899999998765443321 1 12456667754321 1124688887
Q ss_pred ecccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 162 FFESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 162 ~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
..- +++ ..+..+.+.+.|...++..
T Consensus 90 ~~~-----~~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 90 AFT-----NDDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp ECS-----SCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEe-----CCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 542 223 4444455555555555553
No 414
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.83 E-value=1.5 Score=36.61 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=53.7
Q ss_pred CCeEEEeCCCC-C-HHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-CCCCCCCeeEEEec
Q psy2408 89 GQRFIDIGCGF-G-LSGIRLAKAKGC--RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALN-LPFDNDSFDGGWFF 163 (298)
Q Consensus 89 ~~~vLDiGcG~-G-~~~~~l~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~V~~~ 163 (298)
..+|.=||+|. | .++..+.+ .|. +|+++|.+++.++.+.+ .|. +.....|..+ . -...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~~---~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKVE---DFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGGG---GGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHHh---hccCCEEEEe
Confidence 36899999875 3 33444444 466 89999999987776653 232 1122334333 1 1457988764
Q ss_pred ccccccChH-HHHHHHhhcccCCcEEE
Q psy2408 164 ESIFHMNHS-AALNEARRVLKSGSILT 189 (298)
Q Consensus 164 ~~l~~~~~~-~~l~~~~r~LkpgG~l~ 189 (298)
-... .. .+++++...++|+..++
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEE
Confidence 3322 12 77888888898887543
No 415
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=89.74 E-value=1.4 Score=32.43 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhc-CCeEEEEeC
Q psy2408 71 QGSDKLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAK-GCRVDGITI 119 (298)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~ 119 (298)
.+|+....+......--+| -|||+|-|.|..=..+.+.+ +..+.++|-
T Consensus 24 taQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 24 VSQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 3556667777777764444 89999999999999998874 778999996
No 416
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.69 E-value=1.8 Score=34.89 Aligned_cols=105 Identities=16% Similarity=0.156 Sum_probs=66.3
Q ss_pred CCCeEEEeCCCCC-HHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFG-LSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G-~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.+||-.|++.+ .++..+++. .|++|+.++.++...+.+.+.....+- .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678898887632 244444443 488999999887666666665554432 26889999998752 00
Q ss_pred CCCeeEEEecccccc----------cChH--------------HHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFH----------MNHS--------------AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~----------~~~~--------------~~l~~~~r~LkpgG~l~i~~~ 193 (298)
.+.+|+++.+..+.. .... .+++.+...++++|+++....
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 146898887655432 1111 255667778888888776543
No 417
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.91 E-value=3.6 Score=33.72 Aligned_cols=102 Identities=18% Similarity=0.110 Sum_probs=64.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHH-HHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKF-QQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~-~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.+||-.|++ |.++..+++. .|++|+.++.+.. ..+...+.....+ .++.++.+|+.+.. + .
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46688888855 5556666554 4889999998764 3444444444433 46889999998741 0 0
Q ss_pred CCCeeEEEeccccccc-------Ch-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIFHM-------NH-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~-------~~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
.+..|+++.+...... .. . .+++.+.+.++.+|+++...
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 1468999876543221 11 1 45666777788888877653
No 418
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=88.84 E-value=4.1 Score=32.84 Aligned_cols=104 Identities=23% Similarity=0.230 Sum_probs=66.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeC-CHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITI-SKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~-s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.++|-.|++ |.++..+++. .|++|+.++. +...++...+.+...+ .++.++..|+.+.. + .
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46678877755 5555566554 4889988775 4566666666655544 46889999998742 0 0
Q ss_pred CCCeeEEEecccccccCh-------------------H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 154 NDSFDGGWFFESIFHMNH-------------------S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~-------------------~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
.+..|+++.+..+..... . .+.+.+.+.++++|+++.....
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 146899987655533211 1 4556777788888888776543
No 419
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.83 E-value=1.6 Score=35.88 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=65.6
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.+||-.|++. ..++..+++. .|++|+.+|.++...+.+.+.....+ .+.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999764 3455555443 48999999999765555555544433 3678899988742 00
Q ss_pred CCCeeEEEecccccc----------cCh-------------H-HHHHHHhhcccCCcEEEEEeC
Q psy2408 154 NDSFDGGWFFESIFH----------MNH-------------S-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~----------~~~-------------~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
-+.+|+++.+..+.. ... . .+++.+.+.++.+|+++....
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 147899998765532 111 1 455666777777888776543
No 420
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.81 E-value=0.46 Score=51.01 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=67.8
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-----C-CC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-----P-FD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-----~-~~ 153 (298)
...++.+|.+||-.|+ | .|..+..+++..|++|++++.+++..+.+++.+...+.. .++...-.++ . ..
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~---~v~~~~~~~~~~~i~~~t~ 1737 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET---CFANSRDTSFEQHVLRHTA 1737 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST---TEEESSSSHHHHHHHHTTT
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce---EEecCCCHHHHHHHHHhcC
Confidence 4556789999999974 4 478888888878999999999998888777643222221 1222111110 1 11
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
...+|+|+-+. . ...+....++|+|+|+++..
T Consensus 1738 g~GvDvVld~~-----g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1738 GKGVDLVLNSL-----A-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp SCCEEEEEECC-----C-HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECC-----C-chHHHHHHHhcCCCcEEEEe
Confidence 24699997532 1 36688889999999998865
No 421
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.27 E-value=2.6 Score=32.84 Aligned_cols=86 Identities=16% Similarity=0.046 Sum_probs=54.6
Q ss_pred eEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEEec
Q psy2408 91 RFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGWFF 163 (298)
Q Consensus 91 ~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~~~ 163 (298)
+|+=+|+ |.++..+++. .+..|+++|.+++.++...+. . .+.++.+|..+.. ..-..+|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 5677776 5566666654 478999999999877765433 1 2678999987631 112468888753
Q ss_pred ccccccChH---HHHHHHhhcccCCcEEEE
Q psy2408 164 ESIFHMNHS---AALNEARRVLKSGSILTL 190 (298)
Q Consensus 164 ~~l~~~~~~---~~l~~~~r~LkpgG~l~i 190 (298)
.++. ..+....+.+.|...++.
T Consensus 73 -----~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 -----TPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp -----CSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred -----cCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 2333 455555565666666655
No 422
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.16 E-value=3.8 Score=33.57 Aligned_cols=102 Identities=18% Similarity=0.082 Sum_probs=65.4
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCC--HHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITIS--KFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F----- 152 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s--~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 152 (298)
.+.++|-.|+ +|.++..+++. .|++|+.++.+ ....+...+.....+ .++.++.+|+.+.. +
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4668888885 45566666654 48899999886 344555555555544 46888889987741 0
Q ss_pred CCCCeeEEEecccccc-cC------h-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 153 DNDSFDGGWFFESIFH-MN------H-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~-~~------~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
..+..|+++.+..... .. . . .+++.+.+.++.+|.++...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 0147899987765432 11 1 1 45566777788888877654
No 423
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.07 E-value=0.58 Score=41.66 Aligned_cols=58 Identities=17% Similarity=0.117 Sum_probs=42.9
Q ss_pred CCeEEEeCCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKAKGC-RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL 150 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~ 150 (298)
..+++|+-||.|.++.-+.+ .|. .|.++|+++...+.-+.++.. .+...+++.|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~-aG~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES-IGGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT-TTEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhh
Confidence 46899999999999988877 454 489999999877776665421 12345677888765
No 424
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.93 E-value=3.3 Score=33.56 Aligned_cols=78 Identities=19% Similarity=0.150 Sum_probs=54.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||-.| |+|.++..+++. .|++|++++.++..++...+.+...+.+.++.++.+|+.+.. +. .
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 356788777 556666666654 388999999998877777666666554456888899987742 00 1
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+|+.+..+
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876654
No 425
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.83 E-value=4.5 Score=35.72 Aligned_cols=95 Identities=20% Similarity=0.133 Sum_probs=55.8
Q ss_pred CCeEEEeCCCC-CH-HHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh-------cC------C-CCceEEEECCCCCCCC
Q psy2408 89 GQRFIDIGCGF-GL-SGIRLAKAKGCRVDGITISKFQQESAMKTAKA-------EG------L-LDKVNFLHGDALNLPF 152 (298)
Q Consensus 89 ~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~-------~~------~-~~~i~~~~~d~~~~~~ 152 (298)
-.+|.-||+|. |. ++..++. .|..|+++|.+++.++.++..... .+ . ..... +..|...+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~-i~~~~~~~-- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL-- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEE-EESCGGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhh-hcCCHHHH--
Confidence 35799999986 33 2333333 578999999999988887664321 01 0 01122 24444221
Q ss_pred CCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 153 DNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 153 ~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
...|+|+..-. +...-. .+++++...++|+..++.
T Consensus 113 --~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 --STVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --TTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 45788875432 211112 778888888888876543
No 426
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.69 E-value=3.1 Score=33.51 Aligned_cols=76 Identities=18% Similarity=0.141 Sum_probs=55.4
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------FDN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 154 (298)
.++.+|--|++.| ++..+++. .|++|..+|.+++.++...+.+...+ .++.++.+|+.+.. -.-
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678888886655 44445443 48999999999999988888887766 46889999998742 012
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578999876643
No 427
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.59 E-value=3.3 Score=33.59 Aligned_cols=82 Identities=21% Similarity=0.234 Sum_probs=48.9
Q ss_pred eEEEeCCCC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccccc
Q psy2408 91 RFIDIGCGF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESIFH 168 (298)
Q Consensus 91 ~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 168 (298)
+|.=||||. |.. +..+.+ .+.+|+++|.+++.++.+.+ .+... . ...|..+. ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~~~~~~~~~----~g~~~--~-~~~~~~~~----~~~D~vi~av---- 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQSTCEKAVE----RQLVD--E-AGQDLSLL----QTAKIIFLCT---- 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHH----TTSCS--E-EESCGGGG----TTCSEEEECS----
T ss_pred EEEEEcCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHh----CCCCc--c-ccCCHHHh----CCCCEEEEEC----
Confidence 577788765 322 223333 47799999999987766542 23321 1 22333322 3579887643
Q ss_pred cChH---HHHHHHhhcccCCcEEE
Q psy2408 169 MNHS---AALNEARRVLKSGSILT 189 (298)
Q Consensus 169 ~~~~---~~l~~~~r~LkpgG~l~ 189 (298)
+.. .++.++...++|+..++
T Consensus 66 -~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 66 -PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred -CHHHHHHHHHHHHhhCCCCCEEE
Confidence 333 77788888888876543
No 428
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.58 E-value=3.8 Score=33.41 Aligned_cols=99 Identities=22% Similarity=0.173 Sum_probs=65.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------FDN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 154 (298)
.|+.+|--|++.| ++..+++. .|++|+.+|.+++.++.+.+.+ + .+...+.+|+.+.. -.-
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5778888886655 55555544 4899999999998877665544 2 35778889988741 012
Q ss_pred CCeeEEEecccccccC------h-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 155 DSFDGGWFFESIFHMN------H-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~------~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+..|+++.+....... + . ...+.+.+.|+.+|.++...
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 5789988765543321 1 1 55567778888888766653
No 429
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.25 E-value=1.6 Score=35.04 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=63.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEE-eCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGI-TISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~v-D~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.++|-.|++. .++..+++. .|++|+.+ +.+....+...+.+...+ .++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGR-DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 466888888654 455555554 48899888 666666666666655443 46889999998742 00
Q ss_pred CCCeeEEEeccccc-c------cCh-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIF-H------MNH-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~-~------~~~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
-+..|+++.+.... . ... . .+.+.+.+.++++|+++...
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 14789998765433 1 110 1 44556666777778777653
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.22 E-value=3 Score=32.09 Aligned_cols=91 Identities=20% Similarity=0.207 Sum_probs=56.2
Q ss_pred eEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC-CCCCeeEEEecccc
Q psy2408 91 RFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF-DNDSFDGGWFFESI 166 (298)
Q Consensus 91 ~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~~l 166 (298)
+||=.| |+|.++..+++. .|.+|++++.++..+.... .++.++.+|+.+... .-..+|+|+.+...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 577666 567777777665 3789999999876544321 358899999877521 01468999876554
Q ss_pred cccC--hH-HHHHHHhhcccC--CcEEEEE
Q psy2408 167 FHMN--HS-AALNEARRVLKS--GSILTLT 191 (298)
Q Consensus 167 ~~~~--~~-~~l~~~~r~Lkp--gG~l~i~ 191 (298)
.... .. ....++.+.++. .+++++.
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 3211 12 445555555544 3566654
No 431
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.20 E-value=5.2 Score=32.33 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=67.8
Q ss_pred HHhCCCCCCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCC-HHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----
Q psy2408 81 INKTSITKGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITIS-KFQQESAMKTAKAEGLLDKVNFLHGDALNLP----- 151 (298)
Q Consensus 81 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s-~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 151 (298)
.....+ .+.++|-.|++ |.++..+++. .|++|+.++.. ...++...+.+...+ .++.++.+|+.+..
T Consensus 24 m~~~~l-~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~ 99 (271)
T 3v2g_A 24 MTSISL-AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQA 99 (271)
T ss_dssp HTTTCC-TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHH
T ss_pred ccccCC-CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHH
Confidence 333333 46788888865 4555555554 48899988654 455565555555544 46889999988742
Q ss_pred C-----CCCCeeEEEecccccccCh-------------------H-HHHHHHhhcccCCcEEEEEeC
Q psy2408 152 F-----DNDSFDGGWFFESIFHMNH-------------------S-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 152 ~-----~~~~fD~V~~~~~l~~~~~-------------------~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+ ..+..|+++.+..+..... + .+++.+.+.++++|.++....
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 0 0136899987765432211 1 456667777888888777543
No 432
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=86.60 E-value=1.9 Score=37.09 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=66.8
Q ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCC
Q psy2408 75 KLSRIMINKTSITKGQRFIDIGCGFGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDN 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 154 (298)
...+.+++.+.. .+.+||.++-+.|.++..+.. ..+++.+.-|...... +...++.. .. .+ ....+.
T Consensus 33 ~~~~~l~~~~~~-~~~~~l~~n~~~g~~~~~~~~--~~~~~~~~~~~~~~~~----l~~~~~~~--~~--~~--~~~~~~ 99 (381)
T 3dmg_A 33 PVHDLLQKTVEP-FGERALDLNPGVGWGSLPLEG--RMAVERLETSRAAFRC----LTASGLQA--RL--AL--PWEAAA 99 (381)
T ss_dssp HHHHHHHTTCCC-CSSEEEESSCTTSTTTGGGBT--TBEEEEEECBHHHHHH----HHHTTCCC--EE--CC--GGGSCT
T ss_pred hHHHHHHHHHHH-hCCcEEEecCCCCccccccCC--CCceEEEeCcHHHHHH----HHHcCCCc--cc--cC--CccCCc
Confidence 445566777654 446999999999987766643 3578888767655444 45556542 21 11 111234
Q ss_pred CCeeEEEecccccccCh-H-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 155 DSFDGGWFFESIFHMNH-S-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 155 ~~fD~V~~~~~l~~~~~-~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
..||+|+....=.--.. . ..|.++.+.|+|||.+++..-.
T Consensus 100 ~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 100 GAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp TCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 68999875332110001 2 7888889999999999887544
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.60 E-value=1.8 Score=35.81 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=52.0
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCCCCCCCCeeEEEeccc
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH-GDALNLPFDNDSFDGGWFFES 165 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~V~~~~~ 165 (298)
++.+|+=+|+|. |......+...|.+|+++|.++...+.+.+ .+ +.... .+..++ -...|+|+..-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~---l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH---VKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH---STTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH---hhCCCEEEECCC
Confidence 678999999865 444444444468899999999865544322 22 22222 222221 146899987665
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 166 IFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 166 l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
...+.. .....++||+.++-.
T Consensus 225 ~~~i~~-----~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 225 SMILNQ-----TVLSSMTPKTLILDL 245 (300)
T ss_dssp SCCBCH-----HHHTTSCTTCEEEEC
T ss_pred hhhhCH-----HHHHhCCCCCEEEEE
Confidence 533322 244678998865443
No 434
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=86.54 E-value=6.3 Score=32.62 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=51.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEE-ECCCCCCC-CC--CCCeeE
Q psy2408 87 TKGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFL-HGDALNLP-FD--NDSFDG 159 (298)
Q Consensus 87 ~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~-~~d~~~~~-~~--~~~fD~ 159 (298)
.++.+||-.| |+|.++..+++. .|.+|++++.++...+.....+.... ..++.++ .+|+.+.. +. -..+|+
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence 3567898777 567777777765 37899999998876655444433211 1357888 78887642 11 136899
Q ss_pred EEeccccc
Q psy2408 160 GWFFESIF 167 (298)
Q Consensus 160 V~~~~~l~ 167 (298)
|+.+....
T Consensus 87 vih~A~~~ 94 (342)
T 1y1p_A 87 VAHIASVV 94 (342)
T ss_dssp EEECCCCC
T ss_pred EEEeCCCC
Confidence 98765543
No 435
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.39 E-value=3.4 Score=33.53 Aligned_cols=84 Identities=20% Similarity=0.217 Sum_probs=49.1
Q ss_pred eEEEeCCCC-CHH-HHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCC-CeeEEEeccc
Q psy2408 91 RFIDIGCGF-GLS-GIRLAKAKGC--RVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDND-SFDGGWFFES 165 (298)
Q Consensus 91 ~vLDiGcG~-G~~-~~~l~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fD~V~~~~~ 165 (298)
+|.=||+|. |.. +..+.+ .|. +|+++|.+++.++.+++ .|... ....|..+. -. ..|+|+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~---~~~~aDvVila-- 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVD----LGIID---EGTTSIAKV---EDFSPDFVMLS-- 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHH----TTSCS---EEESCGGGG---GGTCCSEEEEC--
T ss_pred EEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCHHHHHHHHH----CCCcc---cccCCHHHH---hcCCCCEEEEc--
Confidence 677888775 333 233333 465 89999999987776542 23211 112232221 13 57888753
Q ss_pred ccccChH---HHHHHHhhcccCCcEEEE
Q psy2408 166 IFHMNHS---AALNEARRVLKSGSILTL 190 (298)
Q Consensus 166 l~~~~~~---~~l~~~~r~LkpgG~l~i 190 (298)
++.. .++.++...++++..++.
T Consensus 70 ---vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 ---SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ---SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3433 677788888888875444
No 436
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.17 E-value=2 Score=35.38 Aligned_cols=88 Identities=16% Similarity=0.057 Sum_probs=51.2
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCCCCCCCCeeEEEeccc
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH-GDALNLPFDNDSFDGGWFFES 165 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~V~~~~~ 165 (298)
++.+|+=+|+|. |......+...|.+|+++|.++...+.+. ..+ +.... .++.++ -...|+|+..-.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH---hcCCCEEEECCC
Confidence 678999999875 44444444446889999999987554432 223 22222 122111 146899987654
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEE
Q psy2408 166 IFHMNHSAALNEARRVLKSGSILTLT 191 (298)
Q Consensus 166 l~~~~~~~~l~~~~r~LkpgG~l~i~ 191 (298)
...+.. +....++||+.++-.
T Consensus 223 ~~~i~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 223 ALVVTA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp SCCBCH-----HHHHHSCTTCEEEEC
T ss_pred hHHhCH-----HHHHhcCCCCEEEEe
Confidence 432222 233467898866543
No 437
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.15 E-value=3.2 Score=32.54 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEECCCCC-CCCCCCCeeEEEe
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKV-NFLHGDALN-LPFDNDSFDGGWF 162 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i-~~~~~d~~~-~~~~~~~fD~V~~ 162 (298)
.+++||=.| |+|.++..+++. .|.+|++++.++..++.... .++ .++.+|+.+ +.-.-+.+|+|+.
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 467899887 567777777765 37899999998765544322 147 889999862 1111246899987
Q ss_pred cccccc
Q psy2408 163 FESIFH 168 (298)
Q Consensus 163 ~~~l~~ 168 (298)
+.....
T Consensus 91 ~ag~~~ 96 (236)
T 3e8x_A 91 AAGSGP 96 (236)
T ss_dssp CCCCCT
T ss_pred CCCCCC
Confidence 766543
No 438
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.84 E-value=4.8 Score=31.91 Aligned_cols=76 Identities=21% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||=.|+ +|.++..+++. .|++|+.+|.+++.++...+.+...+ .++.++.+|+.+.. + ..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4668888885 45566666654 38899999999998888777776544 46889999998742 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999887654
No 439
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.51 E-value=4.6 Score=32.38 Aligned_cols=76 Identities=16% Similarity=0.026 Sum_probs=55.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.+++.++...+.+...+ .++.++..|+.+.. + ..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 5678887775 45666666654 38899999999988888777776654 46889999998742 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999877655
No 440
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=85.43 E-value=2.4 Score=36.65 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cC-CeEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEECCCCCCC-----CCCCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KG-CRVDGITISKFQQESAMKTAKAEG--LLDKVNFLHGDALNLP-----FDNDS 156 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~-~~v~~vD~s~~~l~~a~~~~~~~~--~~~~i~~~~~d~~~~~-----~~~~~ 156 (298)
.+++||=.| |+|.++..+++. .| .+|+++|.++..+......+.... .+.++.++.+|+.+.. +....
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 356888887 568888888775 36 699999999987766655544321 1246889999988742 12357
Q ss_pred eeEEEeccccccc
Q psy2408 157 FDGGWFFESIFHM 169 (298)
Q Consensus 157 fD~V~~~~~l~~~ 169 (298)
+|+|+......|.
T Consensus 113 ~D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 113 YDYVLNLSALKHV 125 (399)
T ss_dssp CSEEEECCCCCCG
T ss_pred CCEEEECCCcCCC
Confidence 8999876655443
No 441
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.06 E-value=5.4 Score=30.78 Aligned_cols=92 Identities=16% Similarity=0.124 Sum_probs=58.6
Q ss_pred eEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC-CCCCeeEEEecccc
Q psy2408 91 RFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPF-DNDSFDGGWFFESI 166 (298)
Q Consensus 91 ~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~~l 166 (298)
+||=.| |+|.++..+++. .|.+|++++.++..+.... ..++.++.+|+.+... .-+.+|+|+.+...
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccHhhcccCCEEEECCcc
Confidence 577676 577777777765 3789999999986544321 1358899999877531 01468999876655
Q ss_pred ccc---Ch-H-HHHHHHhhcccC-CcEEEEE
Q psy2408 167 FHM---NH-S-AALNEARRVLKS-GSILTLT 191 (298)
Q Consensus 167 ~~~---~~-~-~~l~~~~r~Lkp-gG~l~i~ 191 (298)
.+- .. . ....++.+.++. |+++++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 321 11 2 555666666654 3566554
No 442
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.51 E-value=6.4 Score=31.25 Aligned_cols=76 Identities=21% Similarity=0.159 Sum_probs=52.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||=.| |+|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456888777 456677766665 37899999999887766655555443 35889999988741 00 1
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+|+.+...
T Consensus 89 ~~id~vi~~Ag~ 100 (260)
T 3awd_A 89 GRVDILVACAGI 100 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876554
No 443
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.38 E-value=6.4 Score=31.70 Aligned_cols=77 Identities=17% Similarity=0.002 Sum_probs=53.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||=.|+ +|.++..+++. .|++|+++|.++..++...+.+...+ .++.++.+|+.+.. + ..
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 4568887774 56677777665 38899999999887777666665543 46889999987741 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+|+.+..+.
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689998776543
No 444
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.36 E-value=5.9 Score=31.24 Aligned_cols=77 Identities=22% Similarity=0.113 Sum_probs=54.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------FDN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 154 (298)
.+.++|=.|+ +|.++..+++. .|++|++++.++..++...+.+...+ .++.++..|+.+.. -..
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567887774 55666666654 48899999999988888777776654 45889999988741 012
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+..+.
T Consensus 81 ~~id~li~~Ag~~ 93 (247)
T 3lyl_A 81 LAIDILVNNAGIT 93 (247)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689998776543
No 445
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.27 E-value=13 Score=30.39 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=50.7
Q ss_pred CeEEEeCCCC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEE--------C---CCCCCCCCCCC
Q psy2408 90 QRFIDIGCGF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLH--------G---DALNLPFDNDS 156 (298)
Q Consensus 90 ~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~--------~---d~~~~~~~~~~ 156 (298)
++|.-||+|. |.. +..+++ .|.+|+++|.+++.++..++. + +.... . +..+..-.-..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecchhhcccCCC
Confidence 4788899875 322 333333 478999999999877766543 2 11111 0 11111000026
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEE
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~ 191 (298)
+|+|+..-.-. .. .+++.+...++|+..++..
T Consensus 75 ~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 75 VDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 89887643211 12 7888888888887665543
No 446
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.06 E-value=6.4 Score=32.32 Aligned_cols=77 Identities=18% Similarity=0.160 Sum_probs=55.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||-.|++ |.++..+++. .|++|++++.++..++.+.+.+...+ .++.++..|+.+.. +. .
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56788888866 5555556554 48899999999998888877776654 46889999998742 00 1
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+..+.
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789998876543
No 447
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.71 E-value=6.2 Score=31.17 Aligned_cols=76 Identities=16% Similarity=-0.025 Sum_probs=52.4
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||=.| |+|.++..+++. .|++|+++|.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 456788776 567777777765 37899999999887766655555433 35888899987641 00 1
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+|+.+...
T Consensus 87 ~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 87 GKVDILVNNAGG 98 (255)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876554
No 448
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=83.65 E-value=6.8 Score=31.26 Aligned_cols=77 Identities=13% Similarity=-0.030 Sum_probs=54.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|+.+|.++..++...+.+...+ .++.++..|+.+.. +. .
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45678877755 5555566554 48999999999988887777776554 46889999998742 00 1
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+..|+++.+..+.
T Consensus 88 g~id~lv~nAg~~ 100 (256)
T 3gaf_A 88 GKITVLVNNAGGG 100 (256)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689998776553
No 449
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.48 E-value=8.4 Score=30.83 Aligned_cols=76 Identities=14% Similarity=0.042 Sum_probs=54.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|++.| ++..+++. .|++|+.+|.+++.++...+.+...+ .++.++..|+.+.. + ..
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678888887655 44444443 48899999999988888777776654 46889999998742 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+...
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 478999876643
No 450
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=83.21 E-value=9.8 Score=31.44 Aligned_cols=97 Identities=16% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCeEEEeCCCC-CHH-HHHHHHhcCC--eEEEEeCCHHHHHH-HHHHHHhcCCCCceEEEEC-CCCCCCCCCCCeeEEEe
Q psy2408 89 GQRFIDIGCGF-GLS-GIRLAKAKGC--RVDGITISKFQQES-AMKTAKAEGLLDKVNFLHG-DALNLPFDNDSFDGGWF 162 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~-~~~l~~~~~~--~v~~vD~s~~~l~~-a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD~V~~ 162 (298)
..+|.=+|+|. |.. +..++. .+. +|+.+|.+++.++. +.+......+.....+... |...+ ...|+|+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~aD~Vii 81 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEIC----RDADMVVI 81 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGG----TTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHh----CCCCEEEE
Confidence 46899999975 333 222333 455 89999999866652 2211111111112233322 32221 35899887
Q ss_pred cccccccCh-------------H-HHHHHHhhcccCCcEEEEE
Q psy2408 163 FESIFHMNH-------------S-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 163 ~~~l~~~~~-------------~-~~l~~~~r~LkpgG~l~i~ 191 (298)
.--....+. . .+++.+... .|++.++..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~ 123 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLI 123 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence 553333320 0 445555553 688876654
No 451
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=83.03 E-value=0.77 Score=33.02 Aligned_cols=70 Identities=10% Similarity=0.094 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEECCC---CCCCCCCCCeeEEEeccccc--ccChH-HHHHHHhhcccCCcEEEE
Q psy2408 120 SKFQQESAMKTAKAEGLLDKVNFLHGDA---LNLPFDNDSFDGGWFFESIF--HMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 120 s~~~l~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~fD~V~~~~~l~--~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
.++.++.++......+ .......-.|= -...++.+.||.|+...--. +..-+ .++..+.+.|||||.|..
T Consensus 21 ~pe~le~~k~~~~~~~-~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKK-VKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTT-EEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhccc-cchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4667777776665420 01122222220 11245679999997643222 22333 999999999999999876
No 452
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.98 E-value=4 Score=32.58 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=54.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C----CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F----DND 155 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----~~~ 155 (298)
.+.++|-.|++ |.++..+++. .|++|+++|.++..++...+.+...+ .++.++.+|+.+.. + ..+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 45678888765 4455555554 48899999999888887777776654 46899999998742 0 014
Q ss_pred CeeEEEeccccc
Q psy2408 156 SFDGGWFFESIF 167 (298)
Q Consensus 156 ~fD~V~~~~~l~ 167 (298)
..|+++.+..+.
T Consensus 83 ~id~lv~nAg~~ 94 (252)
T 3h7a_A 83 PLEVTIFNVGAN 94 (252)
T ss_dssp CEEEEEECCCCC
T ss_pred CceEEEECCCcC
Confidence 789998776653
No 453
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.93 E-value=8 Score=30.70 Aligned_cols=78 Identities=18% Similarity=0.021 Sum_probs=53.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLL-DKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.++|-.|++ |.++..+++. .|++|+.++.++..++...+.+...... .++.++..|+.+.. + .
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 45678877765 4555555554 4899999999998888777766554222 45788999998742 0 0
Q ss_pred CCCeeEEEecccc
Q psy2408 154 NDSFDGGWFFESI 166 (298)
Q Consensus 154 ~~~fD~V~~~~~l 166 (298)
.+..|+++.+..+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1478999987665
No 454
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=82.89 E-value=6.9 Score=31.71 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=53.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46688888855 5555555554 48999999999988887777766544 46889999998742 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+..|+++.+..+.
T Consensus 100 g~id~lv~nAg~~ 112 (279)
T 3sju_A 100 GPIGILVNSAGRN 112 (279)
T ss_dssp CSCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 4689998776543
No 455
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=82.86 E-value=0.15 Score=48.63 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=59.9
Q ss_pred HhCCCCCCCeEEEeCC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC------CCC
Q psy2408 82 NKTSITKGQRFIDIGC-G-FGLSGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL------PFD 153 (298)
Q Consensus 82 ~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~ 153 (298)
+..++.+|.+||-.|+ | .|..+..+++..|++|++++.++ ..+..+ .+. -.++...-.++ -..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-----lga---~~v~~~~~~~~~~~i~~~t~ 409 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE-----LSR---EHLASSRTCDFEQQFLGATG 409 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-----SCG---GGEECSSSSTHHHHHHHHSC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-----cCh---hheeecCChhHHHHHHHHcC
Confidence 3456789999999994 4 58888899988899999998654 211111 121 11221111111 012
Q ss_pred CCCeeEEEecccccccChHHHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIFHMNHSAALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~~~~~l~~~~r~LkpgG~l~i~~ 192 (298)
...+|+|+-+..- ..+....++|+|+|+++...
T Consensus 410 g~GvDvVld~~gg------~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 410 GRGVDVVLNSLAG------EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp SSCCSEEEECCCT------TTTHHHHTSCTTCEEEEECC
T ss_pred CCCeEEEEECCCc------HHHHHHHHHhcCCCEEEEec
Confidence 3469999863321 35577889999999988754
No 456
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=82.78 E-value=5.1 Score=32.00 Aligned_cols=76 Identities=18% Similarity=-0.014 Sum_probs=53.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|+ +|.++..+++. .|++|+.+|.+++.++.+.+.+...+ .++.++..|+.+.. + ..
T Consensus 5 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 5 KEKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567887775 45566666554 48899999999988888777665433 46889999998741 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 82 g~id~lv~nAg~ 93 (257)
T 3imf_A 82 GRIDILINNAAG 93 (257)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999876653
No 457
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.76 E-value=2 Score=36.01 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=59.1
Q ss_pred CCCeEEEeCCCC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh-------cC-CCC---------ceEEEECCCC
Q psy2408 88 KGQRFIDIGCGF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKA-------EG-LLD---------KVNFLHGDAL 148 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~-------~~-~~~---------~i~~~~~d~~ 148 (298)
...+|--||+|+ |.- +..++. .|..|+.+|++++.++.+.+++.. .+ +.. ++++ ..|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 345899999987 332 333333 689999999999998887776542 11 110 1221 12221
Q ss_pred CCCCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeCC
Q psy2408 149 NLPFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDLP 194 (298)
Q Consensus 149 ~~~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~~ 194 (298)
+ .+ ...|+|+ -.+.+.+.-. ++++++-++++|+..|.-.+..
T Consensus 83 ~-a~--~~ad~Vi-Eav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 83 E-AV--EGVVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp H-HT--TTEEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred h-Hh--ccCcEEe-eccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 1 01 3456653 2233333334 9999999999999876554433
No 458
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=82.71 E-value=7.4 Score=31.52 Aligned_cols=102 Identities=18% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHH-HHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKF-QQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~-~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.++|-.|+ +|.++..+++. .|++|++++.+.. ..+...+.+...+ .++.++..|+.+.. +.
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567777765 56666666665 3889999998754 3444444444433 35888899987631 00
Q ss_pred CCCeeEEEecccccccC------h-------------H-HHHHHHhhcccCCcEEEEEe
Q psy2408 154 NDSFDGGWFFESIFHMN------H-------------S-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 154 ~~~fD~V~~~~~l~~~~------~-------------~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
-+.+|+++.+..+.... . . .+++.+.+.|+.+|+++...
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 14689998776543321 1 1 34466667776778877654
No 459
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=82.66 E-value=8.4 Score=30.84 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=52.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|+ +|.++..+++. .|++|++++.+++.++...+.+.......++.++.+|+.+.. + ..
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568888875 56666666654 488999999998877766655544311245888999988741 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+..+.
T Consensus 91 g~id~lv~nAg~~ 103 (267)
T 1iy8_A 91 GRIDGFFNNAGIE 103 (267)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689998876543
No 460
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=82.22 E-value=11 Score=30.14 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=48.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CCCCCeeE
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FDNDSFDG 159 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~ 159 (298)
.|+++|--|++.| ++..+++. .|++|..+|.+.. +.+.+.+...+ .++.++..|+.+.. +..+..|+
T Consensus 8 ~GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 4667777776554 44445443 4899999998743 23334444444 45888999987642 33467999
Q ss_pred EEeccccc
Q psy2408 160 GWFFESIF 167 (298)
Q Consensus 160 V~~~~~l~ 167 (298)
++.+..+.
T Consensus 83 LVNNAGi~ 90 (247)
T 4hp8_A 83 LVNNAGII 90 (247)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99876543
No 461
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.08 E-value=4.9 Score=33.09 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=48.6
Q ss_pred CCeEEEeCCCC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 89 GQRFIDIGCGF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
..+|.-||+|. |.. +..+++ .|.+|+++|.+++.++.+.+. +. .....+..+.- ...|+|+.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~~----g~----~~~~~~~~e~~---~~aDvvi~~--- 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR-AGLSTWGADLNPQACANLLAE----GA----CGAAASAREFA---GVVDALVIL--- 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHT----TC----SEEESSSTTTT---TTCSEEEEC---
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHc----CC----ccccCCHHHHH---hcCCEEEEE---
Confidence 35788898875 322 333333 578999999999877765542 32 12234444431 356888653
Q ss_pred cccChH----HHH---HHHhhcccCCcEEE
Q psy2408 167 FHMNHS----AAL---NEARRVLKSGSILT 189 (298)
Q Consensus 167 ~~~~~~----~~l---~~~~r~LkpgG~l~ 189 (298)
++++ ..+ +.+...++||..++
T Consensus 72 --vp~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 72 --VVNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp --CSSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred --CCCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 3443 333 44556677776554
No 462
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=82.07 E-value=8.5 Score=31.11 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=54.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLL-DKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.+||-.|+ +|.++..+++. .|++|+.+|.+++.++...+.+...+.. .++.++.+|+.+.. + .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4668888885 45566666554 4889999999998888777776654421 26889999998742 0 0
Q ss_pred CCCeeEEEecccc
Q psy2408 154 NDSFDGGWFFESI 166 (298)
Q Consensus 154 ~~~fD~V~~~~~l 166 (298)
.+..|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999876654
No 463
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=81.88 E-value=7.3 Score=31.25 Aligned_cols=79 Identities=16% Similarity=0.019 Sum_probs=54.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-CCCCee
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-DNDSFD 158 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD 158 (298)
.+.++|-.|++ |.++..+++. .|++|+.+|.++..++...+.+...+....+.++..|+.+.. + .-+..|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 45678877754 5566666654 488999999999888777766665543446788889987631 0 124689
Q ss_pred EEEeccccc
Q psy2408 159 GGWFFESIF 167 (298)
Q Consensus 159 ~V~~~~~l~ 167 (298)
+++.+..+.
T Consensus 88 ~lv~nAg~~ 96 (267)
T 3t4x_A 88 ILINNLGIF 96 (267)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 998766543
No 464
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.87 E-value=9.2 Score=31.07 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=48.5
Q ss_pred CeEEEeCC-CC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 90 QRFIDIGC-GF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 90 ~~vLDiGc-G~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.+|.=||+ |. |.. +..+++ .|.+|+++|.+++.++.+.+ .++ .. .+..+. -...|+|+..-.-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~~---~~~aDvVi~av~~ 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-SAHHLAAIEIAPEGRDRLQG----MGI----PL--TDGDGW---IDEADVVVLALPD 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSHHHHHHHHH----TTC----CC--CCSSGG---GGTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHh----cCC----Cc--CCHHHH---hcCCCEEEEcCCc
Confidence 48999998 75 333 333333 57899999999887766554 232 11 122211 1357888753322
Q ss_pred cccChHHHHHHHhhcccCCcEEE
Q psy2408 167 FHMNHSAALNEARRVLKSGSILT 189 (298)
Q Consensus 167 ~~~~~~~~l~~~~r~LkpgG~l~ 189 (298)
.. -..++.++...++|+..++
T Consensus 78 ~~--~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 NI--IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HH--HHHHHHHHGGGSCTTCEEE
T ss_pred hH--HHHHHHHHHHhCCCCCEEE
Confidence 11 0167777777777766444
No 465
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.78 E-value=8 Score=31.13 Aligned_cols=76 Identities=12% Similarity=0.017 Sum_probs=53.4
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CCC
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DND 155 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 155 (298)
+.++|-.|++ |.++..+++. .|++|+.++.++..++...+.+...+ .++.++..|+.+.. + .-+
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5577777755 5555555554 48899999999988888777776654 46888899988741 0 014
Q ss_pred CeeEEEeccccc
Q psy2408 156 SFDGGWFFESIF 167 (298)
Q Consensus 156 ~fD~V~~~~~l~ 167 (298)
..|+++.+..+.
T Consensus 81 ~iD~lVnnAG~~ 92 (264)
T 3tfo_A 81 RIDVLVNNAGVM 92 (264)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776553
No 466
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.73 E-value=8.6 Score=32.06 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=55.1
Q ss_pred CeEEEeCCCC-C-HHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH-------hcCCC-C---------ceEEEECCCCCC
Q psy2408 90 QRFIDIGCGF-G-LSGIRLAKAKGCRVDGITISKFQQESAMKTAK-------AEGLL-D---------KVNFLHGDALNL 150 (298)
Q Consensus 90 ~~vLDiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~-------~~~~~-~---------~i~~~~~d~~~~ 150 (298)
.+|--||+|. | .++..++. .|..|++.|.+++.++.+.+.+. ..|+. . ++.+ ..|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHH
Confidence 4788888886 3 33444444 58899999999999988876532 22321 1 2332 2232221
Q ss_pred CCCCCCeeEEEecccccccChH-HHHHHHhhcccCCcEEE
Q psy2408 151 PFDNDSFDGGWFFESIFHMNHS-AALNEARRVLKSGSILT 189 (298)
Q Consensus 151 ~~~~~~fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~ 189 (298)
-...|+|+.+-. +...-. .+++++...++|+..++
T Consensus 85 ---v~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 ---VEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---TTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---HhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 145788865321 111112 77888989998887554
No 467
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.71 E-value=3.8 Score=34.86 Aligned_cols=93 Identities=10% Similarity=0.097 Sum_probs=54.1
Q ss_pred CCeEEEeCCCC-CHH-HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh------cCCCCceEEEECCCCCCCCCCCCeeEE
Q psy2408 89 GQRFIDIGCGF-GLS-GIRLAKAKGCRVDGITISKFQQESAMKTAKA------EGLLDKVNFLHGDALNLPFDNDSFDGG 160 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~-~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~------~~~~~~i~~~~~d~~~~~~~~~~fD~V 160 (298)
..+|.=||+|. |.. +..+++ .|..|+..|.+++.++..++.-.. ..++.++.+ ..|..+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH---HhcCCEE
Confidence 45899999875 332 333333 578999999999887776654211 011112222 1222110 1356887
Q ss_pred EecccccccChH---HHHHHHhhcccCCcEEEEE
Q psy2408 161 WFFESIFHMNHS---AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 161 ~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~ 191 (298)
+.. ++.. .+++++...++|+..++..
T Consensus 104 ila-----Vp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIV-----VPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EEC-----CCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEC-----CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 653 3443 8888899999888765543
No 468
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.59 E-value=9.5 Score=30.53 Aligned_cols=79 Identities=9% Similarity=-0.183 Sum_probs=53.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|++. .++..+++. .|++|+.+|.+++.++.+.+.+.......++.++..|+.+.. + .-
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 466888888654 455555554 488999999999888877776665222234888999998742 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+..|+++.+..+.
T Consensus 86 g~id~lvnnAg~~ 98 (265)
T 3lf2_A 86 GCASILVNNAGQG 98 (265)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689998776553
No 469
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=81.55 E-value=3.8 Score=32.98 Aligned_cols=78 Identities=17% Similarity=0.011 Sum_probs=55.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------CCC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------FDN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 154 (298)
.|+++|--|++. .++..+++. .|++|..+|.+++.++...+.+...+ .++.++.+|+.+.. -.-
T Consensus 8 ~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 466777777655 455555554 48999999999999888888777765 35888899988731 113
Q ss_pred CCeeEEEecccccc
Q psy2408 155 DSFDGGWFFESIFH 168 (298)
Q Consensus 155 ~~fD~V~~~~~l~~ 168 (298)
+..|+++.+..+..
T Consensus 85 G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 85 IHVDILINNAGIQY 98 (255)
T ss_dssp CCCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 67899998765543
No 470
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.53 E-value=9.8 Score=30.44 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCeEEEeCCCC-CHH-HHHHHHhcCCe-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEeccc
Q psy2408 89 GQRFIDIGCGF-GLS-GIRLAKAKGCR-VDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFES 165 (298)
Q Consensus 89 ~~~vLDiGcG~-G~~-~~~l~~~~~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 165 (298)
+.+|.=||||. |.. +..++. .|.+ |+++|.+++.++.+.+.. + +.. ..|..+. . ...|+|+..-.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~-~g~~~v~~~~~~~~~~~~~~~~~---g----~~~-~~~~~~~-~--~~~Dvvi~av~ 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR-KGFRIVQVYSRTEESARELAQKV---E----AEY-TTDLAEV-N--PYAKLYIVSLK 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSHHHHHHHHHHT---T----CEE-ESCGGGS-C--SCCSEEEECCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHH-CCCeEEEEEeCCHHHHHHHHHHc---C----Cce-eCCHHHH-h--cCCCEEEEecC
Confidence 45788999864 332 223333 4677 899999998776655432 2 222 2333332 1 35798876432
Q ss_pred ccccChHHHHHHHhhcccCCcEEEE
Q psy2408 166 IFHMNHSAALNEARRVLKSGSILTL 190 (298)
Q Consensus 166 l~~~~~~~~l~~~~r~LkpgG~l~i 190 (298)
-... ..++..+...++++..++-
T Consensus 78 ~~~~--~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 78 DSAF--AELLQGIVEGKREEALMVH 100 (266)
T ss_dssp HHHH--HHHHHHHHTTCCTTCEEEE
T ss_pred HHHH--HHHHHHHHhhcCCCcEEEE
Confidence 2111 1677777777777765444
No 471
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.34 E-value=10 Score=29.89 Aligned_cols=76 Identities=20% Similarity=0.088 Sum_probs=52.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|++++.+++.++...+.+...+ .++.++..|+.+.. +. -
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35678888854 5666666654 38899999999888777666655443 35888999987741 00 1
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+++.+..+
T Consensus 83 g~id~lv~nAg~ 94 (247)
T 2jah_A 83 GGLDILVNNAGI 94 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999876554
No 472
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.18 E-value=6.8 Score=32.54 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=53.4
Q ss_pred CCCeEEEeCCCC-CH-HHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEE-----EECCCCCCCCCCCCeeEE
Q psy2408 88 KGQRFIDIGCGF-GL-SGIRLAKAKGCRVDGITISKFQQESAMKTAKAEGLLDKVNF-----LHGDALNLPFDNDSFDGG 160 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~-----~~~d~~~~~~~~~~fD~V 160 (298)
...+|.-||+|. |. ++..|++ .|..|+.+ .+++.++..++.-.....+ ...+ ...|... ...+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~~~~~~~i~~~g~~~~~~-~~~~~~~~~~~~~~~~----~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR-AGHEVILI-ARPQHVQAIEATGLRLETQ-SFDEQVKVSASSDPSA----VQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CCHHHHHHHHHHCEEEECS-SCEEEECCEEESCGGG----GTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHH-CCCeEEEE-EcHhHHHHHHhCCeEEEcC-CCcEEEeeeeeCCHHH----cCCCCEE
Confidence 346899999986 43 3444444 57899999 8888777766531000000 0011 0112111 1468988
Q ss_pred EecccccccChH-HHHHHHhhcccCCcEEEEEe
Q psy2408 161 WFFESIFHMNHS-AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 161 ~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~ 192 (298)
+..---. .. .+++.+...++|+..++...
T Consensus 91 ilavk~~---~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 91 LFCVKST---DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EECCCGG---GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEcccc---cHHHHHHHHHHhcCCCCEEEEeC
Confidence 7643222 22 78888999999887665543
No 473
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=81.12 E-value=0.45 Score=38.57 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=31.5
Q ss_pred EEEECCCCCC--CCCCCCeeEEEeccccccc--------------ChH-HHHHHHhhcccCCcEEEEE
Q psy2408 141 NFLHGDALNL--PFDNDSFDGGWFFESIFHM--------------NHS-AALNEARRVLKSGSILTLT 191 (298)
Q Consensus 141 ~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~--------------~~~-~~l~~~~r~LkpgG~l~i~ 191 (298)
.++++|..+. .+++++||+|++.--...- ... ..+.++.++|+|+|.+++.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4566665432 2335677777763322111 112 7788899999999999886
No 474
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=81.07 E-value=9.9 Score=30.27 Aligned_cols=76 Identities=13% Similarity=0.052 Sum_probs=52.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC------
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD------ 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~------ 153 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4568887775 56666666654 38899999999887776665555433 35888999987741 00
Q ss_pred CCCeeEEEecccc
Q psy2408 154 NDSFDGGWFFESI 166 (298)
Q Consensus 154 ~~~fD~V~~~~~l 166 (298)
.+.+|+++.+..+
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 1578999887654
No 475
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=80.69 E-value=11 Score=30.51 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=52.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3567888875 55666666654 48899999999887776666555443 35888999987631 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+++.+..+
T Consensus 98 g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 98 GPVDVLVNNAGR 109 (277)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999877654
No 476
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=80.50 E-value=1.5 Score=31.19 Aligned_cols=89 Identities=13% Similarity=0.057 Sum_probs=49.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEEE
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGGW 161 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 161 (298)
+.+|+=+|+ |..+..+++. .|.+|+++|.++..++.++. . ...++.+|..+.. ...+.+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y----ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T----CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h----CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 457999997 5555555543 47899999999865543321 1 2356677765421 1124688887
Q ss_pred ecccccccChH-HHHHHHhhcccCCcEEEE
Q psy2408 162 FFESIFHMNHS-AALNEARRVLKSGSILTL 190 (298)
Q Consensus 162 ~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i 190 (298)
....-. ... ..+....+.+.+. .++.
T Consensus 76 ~~~~~~--~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 76 VAIGAN--IQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp ECCCSC--HHHHHHHHHHHHHTTCS-EEEE
T ss_pred ECCCCc--hHHHHHHHHHHHHcCCC-eEEE
Confidence 543221 012 3333444445664 5544
No 477
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.49 E-value=9.2 Score=31.07 Aligned_cols=76 Identities=17% Similarity=0.095 Sum_probs=53.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|+.+|.++..++...+.+...+ .++.++..|+.+.. + ..
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46688888855 4555555554 48899999999988887777665443 46889999998741 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999877655
No 478
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=80.44 E-value=7.4 Score=26.30 Aligned_cols=67 Identities=15% Similarity=-0.015 Sum_probs=43.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cC-CeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-C--CCCCeeEE
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KG-CRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-F--DNDSFDGG 160 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-~--~~~~fD~V 160 (298)
.+.+|+-+|+ |.++..+++. .| .+|+++|.++..++... . ..+.++..|+.+.. + .-..+|+|
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 3568999998 5565555543 46 78999999987766554 1 23667777776521 0 01357887
Q ss_pred Eecc
Q psy2408 161 WFFE 164 (298)
Q Consensus 161 ~~~~ 164 (298)
+...
T Consensus 74 i~~~ 77 (118)
T 3ic5_A 74 ISAA 77 (118)
T ss_dssp EECS
T ss_pred EECC
Confidence 7544
No 479
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.19 E-value=7.7 Score=30.40 Aligned_cols=88 Identities=10% Similarity=0.028 Sum_probs=56.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----CCCCCeeEE
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAK---GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----FDNDSFDGG 160 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V 160 (298)
...+|+=+|+ |..+..+++.+ +. |+++|.+++.++.+. . .+.++.+|..+.. ..-...|+|
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 4568998987 56777777653 56 999999987766553 1 2678999987631 113568888
Q ss_pred EecccccccChH---HHHHHHhhcccCCcEEEEEe
Q psy2408 161 WFFESIFHMNHS---AALNEARRVLKSGSILTLTD 192 (298)
Q Consensus 161 ~~~~~l~~~~~~---~~l~~~~r~LkpgG~l~i~~ 192 (298)
++.. ++. ..+....+-+.|+..++...
T Consensus 76 i~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 76 IVDL-----ESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EECC-----SCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEcC-----CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 7642 222 44445566677876766643
No 480
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=80.11 E-value=8.8 Score=30.58 Aligned_cols=74 Identities=15% Similarity=-0.014 Sum_probs=51.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC--------C---C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP--------F---D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~---~ 153 (298)
.+.++|-.| |+|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. . .
T Consensus 4 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 4 NGQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 355777777 456666666654 38899999999887776665555433 36888999988741 0 0
Q ss_pred CCCeeEEEecc
Q psy2408 154 NDSFDGGWFFE 164 (298)
Q Consensus 154 ~~~fD~V~~~~ 164 (298)
.+.+|+++.+.
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 25689998876
No 481
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.08 E-value=11 Score=30.65 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=49.2
Q ss_pred CeEEEeCCCC-CH-HHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCCCCeeEEEecccc
Q psy2408 90 QRFIDIGCGF-GL-SGIRLAKAK-GCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLPFDNDSFDGGWFFESI 166 (298)
Q Consensus 90 ~~vLDiGcG~-G~-~~~~l~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 166 (298)
.+|.=||+|. |. ++..+++.. +.+|+++|.+++.++.+.+ .+.. .....|..+. -...|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~---~~~~~~~~~~---~~~aDvVilav-- 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIV---DEATADFKVF---AALADVIILAV-- 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSC---SEEESCTTTT---GGGCSEEEECS--
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCc---ccccCCHHHh---hcCCCEEEEcC--
Confidence 5788899886 33 334444422 5789999999887766543 2321 1122333322 13578886533
Q ss_pred cccChH---HHHHHHhhc-ccCCcEEE
Q psy2408 167 FHMNHS---AALNEARRV-LKSGSILT 189 (298)
Q Consensus 167 ~~~~~~---~~l~~~~r~-LkpgG~l~ 189 (298)
+.. .++.++... ++++..++
T Consensus 75 ---p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 ---PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 333 667777777 77765444
No 482
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=80.04 E-value=12 Score=30.13 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=53.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC------
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD------ 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~------ 153 (298)
.+.++|-.|+ +|.++..+++. .|++|++++.++..++...+.+...+ .++.++..|+.+.. +.
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4568888885 56666666654 48899999999887776666555443 35888999987641 00
Q ss_pred CCCeeEEEeccccc
Q psy2408 154 NDSFDGGWFFESIF 167 (298)
Q Consensus 154 ~~~fD~V~~~~~l~ 167 (298)
++.+|+++.+..+.
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 15789998876543
No 483
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=79.97 E-value=11 Score=30.05 Aligned_cols=76 Identities=16% Similarity=0.127 Sum_probs=51.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|+ +|.++..+++. .|++|+.++.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4567887775 45566666654 48899999999887776666655443 35888999987741 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+++.+..+
T Consensus 83 g~id~lv~nAg~ 94 (262)
T 1zem_A 83 GKIDFLFNNAGY 94 (262)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876654
No 484
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.91 E-value=5.4 Score=33.39 Aligned_cols=98 Identities=10% Similarity=-0.037 Sum_probs=58.8
Q ss_pred CCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCH----HHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CCCCC
Q psy2408 89 GQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISK----FQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FDNDS 156 (298)
Q Consensus 89 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~----~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~ 156 (298)
..+||=.| |+|.++..+++. .|.+|++++.++ ...+..... .. .++.++.+|+.+.. +....
T Consensus 10 ~~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l-~~----~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 10 KGRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL-ED----KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp -CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH-HH----TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH-Hh----CCcEEEEeecCCHHHHHHHHhhCC
Confidence 35788888 577777777765 378999998865 444333222 22 35889999997731 21127
Q ss_pred eeEEEecccccccChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 157 FDGGWFFESIFHMNHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 157 fD~V~~~~~l~~~~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
+|+|+......++... .+++.+.+. ..-.+++.+.+
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~-g~v~~~v~S~~ 120 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKAV-GTIKRFLPSEF 120 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHH-CCCSEEECSCC
T ss_pred CCEEEECCchhhHHHHHHHHHHHHHc-CCceEEeeccc
Confidence 8999887766555544 555554442 11235555433
No 485
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=79.63 E-value=13 Score=29.62 Aligned_cols=77 Identities=17% Similarity=0.044 Sum_probs=46.5
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC----------CC
Q psy2408 88 KGQRFIDIGCGF-GLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP----------FD 153 (298)
Q Consensus 88 ~~~~vLDiGcG~-G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~ 153 (298)
.+.+||-.|++. |.++..+++. .|++|++++.++...+.+.+.....+ ...++.+|+.+.. -.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHH
Confidence 456889888752 6666666654 38899999987622222222222222 2467888987631 01
Q ss_pred CCCeeEEEeccccc
Q psy2408 154 NDSFDGGWFFESIF 167 (298)
Q Consensus 154 ~~~fD~V~~~~~l~ 167 (298)
.+.+|+++.+..+.
T Consensus 85 ~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 85 WPKFDGFVHSIGFA 98 (265)
T ss_dssp CSSEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 24789998876543
No 486
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=79.46 E-value=11 Score=30.21 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=52.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCceEEEECCCCCCC-
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITIS------------KFQQESAMKTAKAEGLLDKVNFLHGDALNLP- 151 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s------------~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~- 151 (298)
.+.+||-.|++ |.++..+++. .|++|+++|.+ .+.++.....+...+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 46788888854 5555555554 48999999987 666666666555544 46899999998742
Q ss_pred ----CC-----CCCeeEEEecccccc
Q psy2408 152 ----FD-----NDSFDGGWFFESIFH 168 (298)
Q Consensus 152 ----~~-----~~~fD~V~~~~~l~~ 168 (298)
+. -+..|+++.+..+..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 00 147899998766543
No 487
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=79.43 E-value=11 Score=30.71 Aligned_cols=77 Identities=19% Similarity=0.063 Sum_probs=52.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4568887775 56666666654 38899999999887776666555443 35788999988741 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+..+.
T Consensus 110 g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 110 GIIDILVNNAGII 122 (291)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689998876543
No 488
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=79.40 E-value=5.7 Score=32.07 Aligned_cols=77 Identities=14% Similarity=0.042 Sum_probs=54.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.|+ +|.++..+++. .|++|+.+|.++..++...+.+...+ .++.++.+|+.+.. + ..
T Consensus 25 ~gk~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4667887774 55566666654 48899999999988888777776554 45888899988742 0 01
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+..|+++.+..+.
T Consensus 102 g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 102 IDVDILVNNAGIQ 114 (271)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876653
No 489
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=79.16 E-value=10 Score=30.76 Aligned_cols=74 Identities=16% Similarity=0.148 Sum_probs=50.7
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++...+.+...+. .++.++.+|+.+.. +. .
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3568887775 56666666654 488999999999887766655554332 25888999988731 00 1
Q ss_pred CCeeEEEec
Q psy2408 155 DSFDGGWFF 163 (298)
Q Consensus 155 ~~fD~V~~~ 163 (298)
+.+|+++.+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 368999876
No 490
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.11 E-value=0.86 Score=38.21 Aligned_cols=55 Identities=18% Similarity=0.082 Sum_probs=37.1
Q ss_pred ceEEE-ECCCCCC--CCCCCCeeEEEecccccc-----------cChH-HHHHHHhhcccCCcEEEEEeC
Q psy2408 139 KVNFL-HGDALNL--PFDNDSFDGGWFFESIFH-----------MNHS-AALNEARRVLKSGSILTLTDL 193 (298)
Q Consensus 139 ~i~~~-~~d~~~~--~~~~~~fD~V~~~~~l~~-----------~~~~-~~l~~~~r~LkpgG~l~i~~~ 193 (298)
...++ ++|..+. .+++++||+|++.--... +... ..|.++.++|+|+|.+++..-
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 35666 8887542 345678999987433221 1122 788889999999999988643
No 491
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=78.99 E-value=1.9 Score=36.98 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=33.6
Q ss_pred CCCCeEEEeCCCC---CHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Q psy2408 87 TKGQRFIDIGCGF---GLSGIRLAKAKGCRVDGITISKFQQESAMK 129 (298)
Q Consensus 87 ~~~~~vLDiGcG~---G~~~~~l~~~~~~~v~~vD~s~~~l~~a~~ 129 (298)
.++.+||-+|+|+ |..+..+++..|++|+++|.+++.++.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 6788999995444 555566666679999999999998888865
No 492
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.97 E-value=12 Score=29.73 Aligned_cols=78 Identities=17% Similarity=0.110 Sum_probs=53.2
Q ss_pred CCCeEEEeCC-CCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----C
Q psy2408 88 KGQRFIDIGC-GFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----D 153 (298)
Q Consensus 88 ~~~~vLDiGc-G~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 153 (298)
.+.+||=.|+ |.| ++..+++. .|++|+.+|.+...++...+.+...+ ..++.++..|+.+.. + .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678898887 454 33333332 48999999999988887777765443 246899999998742 0 0
Q ss_pred CCCeeEEEeccccc
Q psy2408 154 NDSFDGGWFFESIF 167 (298)
Q Consensus 154 ~~~fD~V~~~~~l~ 167 (298)
.+.+|+++.+..+.
T Consensus 99 ~g~id~li~~Ag~~ 112 (266)
T 3o38_A 99 AGRLDVLVNNAGLG 112 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCcEEEECCCcC
Confidence 14689998876553
No 493
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=78.88 E-value=6.6 Score=31.82 Aligned_cols=78 Identities=18% Similarity=0.119 Sum_probs=54.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.++|-.|++ |.++..+++. .|++|+.++.+++.++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888865 5555555554 48899999999888777777766554 46888999998742 00 1
Q ss_pred CCeeEEEecccccc
Q psy2408 155 DSFDGGWFFESIFH 168 (298)
Q Consensus 155 ~~fD~V~~~~~l~~ 168 (298)
+..|+++.+..+..
T Consensus 108 g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 108 GGIDIAVCNAGIVS 121 (276)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 37899998765543
No 494
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=78.75 E-value=3.5 Score=40.10 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=35.2
Q ss_pred CCCeEEEeCCCCCHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHH
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKAKGC--RVDGITISKFQQESAMKTA 131 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~~vD~s~~~l~~a~~~~ 131 (298)
...+++|+-||.|.++.-+.+ .|. .+.++|+++...+.-+.++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~-AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQ-AGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHH-HTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCCeEEEeccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhC
Confidence 446999999999999988877 465 5789999998887776664
No 495
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=78.72 E-value=12 Score=29.92 Aligned_cols=76 Identities=18% Similarity=0.069 Sum_probs=51.4
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeC-CHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITI-SKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~-s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.+||=.| |+|.++..+++. .|++|++++. ++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 456788666 567777777665 3789999998 7776666655555433 45888999988742 00
Q ss_pred CCCeeEEEecccc
Q psy2408 154 NDSFDGGWFFESI 166 (298)
Q Consensus 154 ~~~fD~V~~~~~l 166 (298)
-+.+|+|+.+...
T Consensus 97 ~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 97 FGGLDFVMSNSGM 109 (274)
T ss_dssp HSCEEEEECCCCC
T ss_pred cCCCCEEEECCCC
Confidence 1368999876544
No 496
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=78.57 E-value=9.8 Score=30.64 Aligned_cols=76 Identities=16% Similarity=-0.010 Sum_probs=52.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----C-----CC
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----F-----DN 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 154 (298)
.+.++|-.| |+|.++..+++. .|++|++++.++..++.....+...+ .++.++..|+.+.. + .-
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 456777766 455566666554 48899999999988887777766554 35788889987741 0 01
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+..|+++.+..+
T Consensus 104 g~iD~lvnnAg~ 115 (270)
T 3ftp_A 104 GALNVLVNNAGI 115 (270)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999877654
No 497
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=78.56 E-value=9.9 Score=30.38 Aligned_cols=79 Identities=16% Similarity=0.066 Sum_probs=51.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++.....+.......++.++.+|+.+.. +. -
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 3567887775 56666666654 388999999998776655544432211235788999988741 00 1
Q ss_pred CCeeEEEeccccc
Q psy2408 155 DSFDGGWFFESIF 167 (298)
Q Consensus 155 ~~fD~V~~~~~l~ 167 (298)
+.+|+++.+....
T Consensus 85 g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 85 GRLDILVNNAGVN 97 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3579998876554
No 498
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=78.53 E-value=13 Score=29.57 Aligned_cols=76 Identities=12% Similarity=0.011 Sum_probs=51.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC-----CC-----C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNLP-----FD-----N 154 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 154 (298)
.+.+||-.| |+|.++..+++. .|++|++++.+++.++...+.+...+ .++.++..|+.+.. +. .
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 456788776 456666666654 38899999999887766655555443 35788889987631 00 1
Q ss_pred CCeeEEEecccc
Q psy2408 155 DSFDGGWFFESI 166 (298)
Q Consensus 155 ~~fD~V~~~~~l 166 (298)
+.+|+++.+..+
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876554
No 499
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=78.52 E-value=13 Score=29.57 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=51.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEECCCCCCC-----CC-----
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAE-GLLDKVNFLHGDALNLP-----FD----- 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~i~~~~~d~~~~~-----~~----- 153 (298)
.+.+||-.|+ +|.++..+++. .|++|++++.++..++...+.+... + .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 6 SGKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567887775 45666666654 3889999999987776655554432 3 35888999988741 00
Q ss_pred CCCeeEEEeccccc
Q psy2408 154 NDSFDGGWFFESIF 167 (298)
Q Consensus 154 ~~~fD~V~~~~~l~ 167 (298)
-+..|+++.+....
T Consensus 83 ~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 83 FGGADILVNNAGTG 96 (263)
T ss_dssp HSSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13689998776543
No 500
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.50 E-value=11 Score=30.57 Aligned_cols=78 Identities=15% Similarity=0.047 Sum_probs=54.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCC-C--------C--C
Q psy2408 88 KGQRFIDIGCGFGLSGIRLAKA---KGCRVDGITISKFQQESAMKTAKAEGLLDKVNFLHGDALNL-P--------F--D 153 (298)
Q Consensus 88 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~-~--------~--~ 153 (298)
.+.+||=.|++ |.++..+++. .|++|++++.+...++.+.+.+...+- .++.++..|+.+. . . .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 45678877755 5566666654 488999999999888777777665432 4689999999875 2 0 0
Q ss_pred CCCeeEEEeccccc
Q psy2408 154 NDSFDGGWFFESIF 167 (298)
Q Consensus 154 ~~~fD~V~~~~~l~ 167 (298)
.+.+|+++.+..+.
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 14789999876654
Done!