BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2410
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7MR31|TYSY_CROS8 Thymidylate synthase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=thyA PE=3 SV=1
Length = 264
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 68/91 (74%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+ GDF+WTGGD HLY NHL+QAR QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P +I AP+AI
Sbjct: 234 RKPESLFDYRFEDFEIEGYDPHPAIKAPVAI 264
>sp|Q0K889|TYSY_CUPNH Thymidylate synthase OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=thyA PE=3 SV=2
Length = 264
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 68/91 (74%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL H++A +TGL+VGDF+WTGGDCHLY NH +Q + QL R P +LP L IL
Sbjct: 174 VPFNIASYALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKIL 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY +EDF++ Y +I AP+A+
Sbjct: 234 RKPDSIFDYRYEDFELAGYQSHAAIKAPVAV 264
>sp|B7LNI2|TYSY_ESCF3 Thymidylate synthase OS=Escherichia fergusonii (strain ATCC 35469 /
DSM 13698 / CDC 0568-73) GN=thyA PE=3 SV=1
Length = 264
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P SLP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRSLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q2SA17|TYSY_HAHCH Thymidylate synthase OS=Hahella chejuensis (strain KCTC 2396)
GN=thyA PE=3 SV=1
Length = 264
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL H+ A + L VGDFIWTGGD HLY NHLDQA++QL R P LP L I
Sbjct: 174 VPFNIASYALLTHMFAQQCDLDVGDFIWTGGDVHLYNNHLDQAKEQLDREPRPLPQLQIR 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P I AP+A+
Sbjct: 234 RKPASLFDYEFEDFEITGYDPHPHIKAPVAV 264
>sp|A8GIH7|TYSY_SERP5 Thymidylate synthase OS=Serratia proteamaculans (strain 568)
GN=thyA PE=3 SV=1
Length = 264
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH++Q + QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P +I AP+AI
Sbjct: 234 RKPASLFDYRFEDFEIEGYDPHPAIKAPVAI 264
>sp|A4WE03|TYSY_ENT38 Thymidylate synthase OS=Enterobacter sp. (strain 638) GN=thyA PE=3
SV=1
Length = 264
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q3YY33|TYSY_SHISS Thymidylate synthase OS=Shigella sonnei (strain Ss046) GN=thyA PE=3
SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q32C94|TYSY_SHIDS Thymidylate synthase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q1R7I6|TYSY_ECOUT Thymidylate synthase OS=Escherichia coli (strain UTI89 / UPEC)
GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7N759|TYSY_ECOLU Thymidylate synthase OS=Escherichia coli O17:K52:H18 (strain UMN026
/ ExPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|P0A884|TYSY_ECOLI Thymidylate synthase OS=Escherichia coli (strain K12) GN=thyA PE=1
SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|P0A885|TYSY_ECOL6 Thymidylate synthase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q0TE05|TYSY_ECOL5 Thymidylate synthase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|A1AF39|TYSY_ECOK1 Thymidylate synthase OS=Escherichia coli O1:K1 / APEC GN=thyA PE=3
SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|C4ZZX9|TYSY_ECOBW Thymidylate synthase OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7LY83|TYSY_ECO8A Thymidylate synthase OS=Escherichia coli O8 (strain IAI1) GN=thyA
PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7MZC6|TYSY_ECO81 Thymidylate synthase OS=Escherichia coli O81 (strain ED1a) GN=thyA
PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7NVX2|TYSY_ECO7I Thymidylate synthase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|P0A886|TYSY_ECO57 Thymidylate synthase OS=Escherichia coli O157:H7 GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7LF04|TYSY_ECO55 Thymidylate synthase OS=Escherichia coli (strain 55989 / EAEC)
GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7MLH3|TYSY_ECO45 Thymidylate synthase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|B7UHP4|TYSY_ECO27 Thymidylate synthase OS=Escherichia coli O127:H6 (strain E2348/69 /
EPEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|A7ZQT3|TYSY_ECO24 Thymidylate synthase OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|C4K7G3|TYSY_HAMD5 Thymidylate synthase OS=Hamiltonella defensa subsp. Acyrthosiphon
pisum (strain 5AT) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASYSLL+H+IA + +GDF+WTGGD HLY NHLDQA QL R P SLP+L I
Sbjct: 174 LPFNIASYSLLMHMIAQQCDFFLGDFVWTGGDIHLYSNHLDQAHLQLTREPRSLPHLLIN 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+FEDF + YNP +I AP+AI
Sbjct: 234 RKPDSLFDYHFEDFSLEKYNPYPAIKAPVAI 264
>sp|B1IU17|TYSY_ECOLC Thymidylate synthase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=thyA PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|A8A3W0|TYSY_ECOHS Thymidylate synthase OS=Escherichia coli O9:H4 (strain HS) GN=thyA
PE=3 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|P48464|TYSY_SHIFL Thymidylate synthase OS=Shigella flexneri GN=thyA PE=2 SV=2
Length = 264
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P + AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGVKAPVAI 264
>sp|Q0T137|TYSY_SHIF8 Thymidylate synthase OS=Shigella flexneri serotype 5b (strain 8401)
GN=thyA PE=3 SV=1
Length = 264
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y+P + AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYDPHPGVKAPVAI 264
>sp|A6TDG3|TYSY_KLEP7 Thymidylate synthase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=thyA PE=3 SV=1
Length = 264
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NHL+Q QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPASIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|A8AP42|TYSY_CITK8 Thymidylate synthase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=thyA PE=3 SV=1
Length = 264
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPDSIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>sp|C6DAE9|TYSY_PECCP Thymidylate synthase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=thyA PE=3 SV=1
Length = 264
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NHL+Q + QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTQLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+P + DY FEDF+I Y+P +I AP+AI
Sbjct: 234 RRPDTLFDYRFEDFEIEGYDPHPTIKAPVAI 264
>sp|Q7N8U4|TYSY_PHOLL Thymidylate synthase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=thyA PE=3 SV=1
Length = 264
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH++Q + QL R P SLP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTKLQLSREPRSLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPASLFDYKFDDFEIVDYDPHPGIKAPVAI 264
>sp|Q31XG0|TYSY_SHIBS Thymidylate synthase OS=Shigella boydii serotype 4 (strain Sb227)
GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP+S DY FEDF+I Y P I AP+AI
Sbjct: 234 RKPESIFDYRFEDFEIEGYAPHPGIKAPVAI 264
>sp|A1JPC9|TYSY_YERE8 Thymidylate synthase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P I APIAI
Sbjct: 234 SKPASLFDYRFEDFEIEGYDPHPGIKAPIAI 264
>sp|A4TLC5|TYSY_YERPP Thymidylate synthase OS=Yersinia pestis (strain Pestoides F)
GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQA QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|Q1CFB5|TYSY_YERPN Thymidylate synthase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQA QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|Q8ZHV1|TYSY_YERPE Thymidylate synthase OS=Yersinia pestis GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQA QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|Q1CAR9|TYSY_YERPA Thymidylate synthase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQA QL R P LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|Q667F9|TYSY_YERPS Thymidylate synthase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQ QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|A7FFE0|TYSY_YERP3 Thymidylate synthase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH+DQ QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY+F+DF I Y+P I APIAI
Sbjct: 234 RKPDSLFDYHFDDFDIEGYDPHPGIKAPIAI 264
>sp|Q8Y0U6|TYSY_RALSO Thymidylate synthase OS=Ralstonia solanacearum (strain GMI1000)
GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 64/91 (70%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL H+IA +TGL VGDF+WTGGDCHLY NH +Q QL R P LP L I
Sbjct: 174 VPFNIASYALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY +EDF+I Y +I AP+A+
Sbjct: 234 RKPDSIFDYRYEDFEIVGYESHPAIKAPVAV 264
>sp|Q6D8I6|TYSY_ERWCT Thymidylate synthase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=thyA PE=3 SV=1
Length = 264
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 66/91 (72%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+P + DY FEDF+I Y+P +I AP+AI
Sbjct: 234 RRPDTLFDYRFEDFEIEGYDPHPAIKAPVAI 264
>sp|A0KG32|TYSY_AERHH Thymidylate synthase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 64/91 (70%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL H++A + L+VGDF+WTGGD HLY NH++Q QL R P LP L I
Sbjct: 174 LPFNIASYALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLTREPRPLPTLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY FEDF+I Y+P I AP+AI
Sbjct: 234 RKPDSIFDYKFEDFEIEGYDPHPGIKAPVAI 264
>sp|Q8ZMA9|TYSY_SALTY Thymidylate synthase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|A9N2L7|TYSY_SALPB Thymidylate synthase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|Q5PEN6|TYSY_SALPA Thymidylate synthase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|Q57KB6|TYSY_SALCH Thymidylate synthase OS=Salmonella choleraesuis (strain SC-B67)
GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|Q8Z412|TYSY_SALTI Thymidylate synthase OS=Salmonella typhi GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|C0PXI9|TYSY_SALPC Thymidylate synthase OS=Salmonella paratyphi C (strain RKS4594)
GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L VGDF+WTGGD HLY NH++Q QL R P +LP L I
Sbjct: 174 LPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KP S DY F+DF+I Y+P I AP+AI
Sbjct: 234 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 264
>sp|Q2NRH3|TYSY_SODGM Thymidylate synthase OS=Sodalis glossinidius (strain morsitans)
GN=thyA PE=3 SV=1
Length = 264
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NHL QA QL R+P LP L I
Sbjct: 174 LPFNIASYALLVHMLAQQCDLQVGDFVWTGGDTHLYSNHLQQADLQLTRDPLPLPQLLIK 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+P + DY FEDF++ Y+P +I AP+A+
Sbjct: 234 RRPATLFDYRFEDFELTGYDPHPAIKAPVAV 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,503,411
Number of Sequences: 539616
Number of extensions: 2820081
Number of successful extensions: 10154
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 9652
Number of HSP's gapped (non-prelim): 459
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)