Your job contains 1 sequence.
>psy2410
MIFKTWISFLLFSIITSISPGPGNILTINHALRYGWRKTLSLIIGQEIALVLIILAISEG
AELLLSSSSILIFIKIFGIIWLMYTSFQMWCASINKKDSTYICETIRLPFNIASYSLLIH
IIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKPKSSLDYNFED
FQINSYNPQKSIYAPIAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2410
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A884 - symbol:thyA "thymidylate synthase" spe... 299 1.5e-26 1
TIGR_CMR|CBU_1547 - symbol:CBU_1547 "thymidylate synthase... 278 2.6e-24 1
TIGR_CMR|SO_1335 - symbol:SO_1335 "thymidylate synthase" ... 277 3.3e-24 1
TIGR_CMR|BA_2236 - symbol:BA_2236 "thymidylate synthase" ... 260 2.1e-22 1
UNIPROTKB|P67044 - symbol:thyA "Thymidylate synthase" spe... 258 3.4e-22 1
UNIPROTKB|F1N8Y2 - symbol:TYMS "Thymidylate synthase" spe... 244 1.0e-20 1
FB|FBgn0024920 - symbol:Ts "Ts" species:7227 "Drosophila ... 243 1.3e-20 1
UNIPROTKB|P04818 - symbol:TYMS "Thymidylate synthase" spe... 240 2.7e-20 1
UNIPROTKB|Q8WYK3 - symbol:TS "Thymidylate synthetase, iso... 240 2.7e-20 1
UNIPROTKB|Q8WYK4 - symbol:TS "Thymidylate synthase" speci... 240 2.7e-20 1
UNIPROTKB|I3LB48 - symbol:TYMS "Thymidylate synthase" spe... 239 3.5e-20 1
UNIPROTKB|F1PU23 - symbol:TYMS "Uncharacterized protein" ... 237 5.7e-20 1
MGI|MGI:98878 - symbol:Tyms "thymidylate synthase" specie... 237 5.7e-20 1
RGD|3921 - symbol:Tyms "thymidylate synthetase" species:1... 237 5.7e-20 1
UNIPROTKB|Q0C504 - symbol:thyA "Thymidylate synthase" spe... 224 1.4e-18 1
ZFIN|ZDB-GENE-040426-59 - symbol:tyms "thymidylate syntha... 218 5.8e-18 1
UNIPROTKB|F1MY63 - symbol:TYMS "Thymidylate synthase" spe... 152 1.5e-17 2
UNIPROTKB|Q2TA32 - symbol:TYMS "Thymidylate synthase" spe... 152 1.5e-17 2
UNIPROTKB|F1PNL9 - symbol:TYMS "Uncharacterized protein" ... 155 2.9e-17 2
UNIPROTKB|F1PNM3 - symbol:TYMS "Thymidylate synthase" spe... 209 5.3e-17 1
SGD|S000005600 - symbol:CDC21 "Thymidylate synthase" spec... 191 5.7e-15 1
CGD|CAL0005915 - symbol:CDC21 species:5476 "Candida albic... 189 1.2e-14 1
ASPGD|ASPL0000066643 - symbol:AN7028 species:162425 "Emer... 191 5.3e-14 1
POMBASE|SPAC15E1.04 - symbol:SPAC15E1.04 "thymidylate syn... 188 9.8e-14 1
UNIPROTKB|G4MSD5 - symbol:MGG_04458 "Thymidylate synthase... 172 1.4e-12 1
TAIR|locus:2139544 - symbol:THY-2 "thymidylate synthase 2... 168 1.2e-11 1
TAIR|locus:2042649 - symbol:THY-1 "thymidylate synthase 1... 163 3.5e-11 1
WB|WBGene00022455 - symbol:Y110A7A.4 species:6239 "Caenor... 152 1.8e-10 1
TAIR|locus:2049389 - symbol:AT2G21550 species:3702 "Arabi... 121 1.1e-06 1
UNIPROTKB|P67049 - symbol:thyA "Thymidylate synthase" spe... 108 9.4e-05 1
>UNIPROTKB|P0A884 [details] [associations]
symbol:thyA "thymidylate synthase" species:83333
"Escherichia coli K-12" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 GO:GO:0006417
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U29581 GO:GO:0003723 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:X03966 GO:GO:0006235 EMBL:J01710
eggNOG:COG0207 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
HOGENOM:HOG000257900 PIR:A00549 RefSeq:NP_417304.1
RefSeq:YP_491032.1 PDB:1AIQ PDB:1AJM PDB:1AN5 PDB:1AOB PDB:1AXW
PDB:1BDU PDB:1BID PDB:1BJG PDB:1BQ1 PDB:1BQ2 PDB:1DDU PDB:1DNA
PDB:1EV5 PDB:1EV8 PDB:1EVF PDB:1EVG PDB:1F4B PDB:1F4C PDB:1F4D
PDB:1F4E PDB:1F4F PDB:1F4G PDB:1FFL PDB:1FWM PDB:1JG0 PDB:1JTQ
PDB:1JTU PDB:1JUT PDB:1KCE PDB:1KZI PDB:1KZJ PDB:1NCE PDB:1QQQ
PDB:1SYN PDB:1TDU PDB:1TJS PDB:1TLC PDB:1TLS PDB:1TRG PDB:1TSD
PDB:1TSN PDB:1TYS PDB:1ZPR PDB:2A9W PDB:2BBQ PDB:2FTN PDB:2FTO
PDB:2FTQ PDB:2G8O PDB:2G8X PDB:2KCE PDB:2TSC PDB:2VET PDB:2VF0
PDB:3B5B PDB:3B9H PDB:3BFI PDB:3BGX PDB:3BHL PDB:3BHR PDB:3TMS
PDB:4F2V PDB:4GEV PDBsum:1AIQ PDBsum:1AJM PDBsum:1AN5 PDBsum:1AOB
PDBsum:1AXW PDBsum:1BDU PDBsum:1BID PDBsum:1BJG PDBsum:1BQ1
PDBsum:1BQ2 PDBsum:1DDU PDBsum:1DNA PDBsum:1EV5 PDBsum:1EV8
PDBsum:1EVF PDBsum:1EVG PDBsum:1F4B PDBsum:1F4C PDBsum:1F4D
PDBsum:1F4E PDBsum:1F4F PDBsum:1F4G PDBsum:1FFL PDBsum:1FWM
PDBsum:1JG0 PDBsum:1JTQ PDBsum:1JTU PDBsum:1JUT PDBsum:1KCE
PDBsum:1KZI PDBsum:1KZJ PDBsum:1NCE PDBsum:1QQQ PDBsum:1SYN
PDBsum:1TDU PDBsum:1TJS PDBsum:1TLC PDBsum:1TLS PDBsum:1TRG
PDBsum:1TSD PDBsum:1TSN PDBsum:1TYS PDBsum:1ZPR PDBsum:2A9W
PDBsum:2BBQ PDBsum:2FTN PDBsum:2FTO PDBsum:2FTQ PDBsum:2G8O
PDBsum:2G8X PDBsum:2KCE PDBsum:2TSC PDBsum:2VET PDBsum:2VF0
PDBsum:3B5B PDBsum:3B9H PDBsum:3BFI PDBsum:3BGX PDBsum:3BHL
PDBsum:3BHR PDBsum:3TMS PDBsum:4F2V PDBsum:4GEV
ProteinModelPortal:P0A884 SMR:P0A884 DIP:DIP-48261N IntAct:P0A884
MINT:MINT-1265510 PRIDE:P0A884 EnsemblBacteria:EBESCT00000001730
EnsemblBacteria:EBESCT00000017304 GeneID:12933064 GeneID:949035
KEGG:ecj:Y75_p2761 KEGG:eco:b2827 PATRIC:32121072 EchoBASE:EB0995
EcoGene:EG11002 BioCyc:EcoCyc:THYMIDYLATESYN-MONOMER
BioCyc:ECOL316407:JW2795-MONOMER
BioCyc:MetaCyc:THYMIDYLATESYN-MONOMER SABIO-RK:P0A884
BindingDB:P0A884 ChEMBL:CHEMBL2555 EvolutionaryTrace:P0A884
Genevestigator:P0A884 Uniprot:P0A884
Length = 264
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 55/97 (56%), Positives = 69/97 (71%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + LPFNIASY+LL+H++A + L+VGDF+WTGGD HLY NH+DQ QL R P L
Sbjct: 168 CDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPL 227
Query: 162 PNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
P L I KP+S DY FEDF+I Y+P I AP+AI
Sbjct: 228 PKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 264
>TIGR_CMR|CBU_1547 [details] [associations]
symbol:CBU_1547 "thymidylate synthase" species:227377
"Coxiella burnetii RSA 493" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_820530.1 ProteinModelPortal:Q83BG2 SMR:Q83BG2
GeneID:1209457 KEGG:cbu:CBU_1547 PATRIC:17931857
BioCyc:CBUR227377:GJ7S-1527-MONOMER Uniprot:Q83BG2
Length = 264
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 51/91 (56%), Positives = 63/91 (69%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL H+IA + LK G+FIW+GGDCH+Y H DQ QL R P +LP L I
Sbjct: 174 VPFNIASYSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIIN 233
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
P S DYNF DF I +Y+P +I AP+A+
Sbjct: 234 RDPSSLYDYNFNDFSIVNYHPHPAIKAPVAV 264
>TIGR_CMR|SO_1335 [details] [associations]
symbol:SO_1335 "thymidylate synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009157 "deoxyribonucleoside
monophosphate biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_716955.1 ProteinModelPortal:Q8EH94 SMR:Q8EH94
GeneID:1169156 KEGG:son:SO_1335 PATRIC:23522326 Uniprot:Q8EH94
Length = 264
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 50/97 (51%), Positives = 68/97 (70%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + LPFNIASY+LL ++A + L +GDF+WTGGD HLY NH++Q QL R P L
Sbjct: 168 CDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPL 227
Query: 162 PNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
P +TIL KP S DY F+DF +++Y+P I AP+A+
Sbjct: 228 PTMTILRKPASIFDYQFDDFALSNYDPHPHIKAPVAV 264
>TIGR_CMR|BA_2236 [details] [associations]
symbol:BA_2236 "thymidylate synthase" species:198094
"Bacillus anthracis str. Ames" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 RefSeq:NP_844627.1
RefSeq:YP_018881.1 RefSeq:YP_028345.1 ProteinModelPortal:Q81R23
SMR:Q81R23 DNASU:1085458 EnsemblBacteria:EBBACT00000013190
EnsemblBacteria:EBBACT00000017828 EnsemblBacteria:EBBACT00000020667
GeneID:1085458 GeneID:2814626 GeneID:2850789 KEGG:ban:BA_2236
KEGG:bar:GBAA_2236 KEGG:bat:BAS2082 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
BioCyc:BANT260799:GJAJ-2150-MONOMER
BioCyc:BANT261594:GJ7F-2225-MONOMER Uniprot:Q81R23
Length = 318
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL H+IAHE GL+VG+F+ T GD H+Y NH +Q KQL R P P LT+
Sbjct: 228 IPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLN 287
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
KS D+ ED I Y+P +I AP+A+
Sbjct: 288 PDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318
>UNIPROTKB|P67044 [details] [associations]
symbol:thyA "Thymidylate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0004799 "thymidylate synthase
activity" evidence=IDA] [GO:0006231 "dTMP biosynthetic process"
evidence=IDA] [GO:0046079 "dUMP catabolic process" evidence=IDA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GO:GO:0046079 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL ProtClustDB:PRK01827 PIR:C70881 RefSeq:NP_217280.1
RefSeq:NP_337339.1 RefSeq:YP_006516209.1 PDB:3QJ7 PDBsum:3QJ7
ProteinModelPortal:P67044 SMR:P67044 PRIDE:P67044
EnsemblBacteria:EBMYCT00000000138 EnsemblBacteria:EBMYCT00000070853
GeneID:13319492 GeneID:887728 GeneID:925453 KEGG:mtc:MT2834
KEGG:mtu:Rv2764c KEGG:mtv:RVBD_2764c PATRIC:18127984
TubercuList:Rv2764c BioCyc:MetaCyc:MONOMER-15786 BindingDB:P67044
ChEMBL:CHEMBL1795162 Uniprot:P67044
Length = 263
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 46/91 (50%), Positives = 64/91 (70%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL H++A + GL VG+FIWTGGDCH+Y NH++Q R QL R P P L +L
Sbjct: 174 VPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKL-LL 232
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
S +Y +ED + +Y+P +I AP+A+
Sbjct: 233 ADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV 263
>UNIPROTKB|F1N8Y2 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9031 "Gallus
gallus" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 EMBL:AADN02021326 IPI:IPI00592996
Ensembl:ENSGALT00000024028 Uniprot:F1N8Y2
Length = 312
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 49/91 (53%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL ++IAH TGLK G+FI T GD H+YLNH++ + QL R P LP L IL
Sbjct: 222 VPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQREPRPLPKLRIL 281
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDFQI YNP I +A+
Sbjct: 282 RKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 312
>FB|FBgn0024920 [details] [associations]
symbol:Ts "Ts" species:7227 "Drosophila melanogaster"
[GO:0004799 "thymidylate synthase activity" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=NAS] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 EMBL:AE014134 GO:GO:0022008 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AF073994 eggNOG:COG0207
KO:K00560 OMA:DTNVAYL RefSeq:NP_477367.1 UniGene:Dm.30804
ProteinModelPortal:O76511 SMR:O76511 DIP:DIP-20012N
MINT:MINT-326941 STRING:O76511 PaxDb:O76511 PRIDE:O76511
EnsemblMetazoa:FBtr0077679 GeneID:33499 KEGG:dme:Dmel_CG3181
CTD:33499 FlyBase:FBgn0024920 GeneTree:ENSGT00390000014786
InParanoid:O76511 OrthoDB:EOG495X7Q PhylomeDB:O76511
GenomeRNAi:33499 NextBio:783907 Bgee:O76511 GermOnline:CG3181
Uniprot:O76511
Length = 321
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL H+IAH TGLK GDF+ T GD H+YLNH++ ++QL R P P L I
Sbjct: 231 VPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKLIIK 290
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+ + D+ FEDFQI YNP I +A+
Sbjct: 291 RQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321
>UNIPROTKB|P04818 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005976
"polysaccharide metabolic process" evidence=IEA] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0019088 "immortalization of host
cell by virus" evidence=IEA] [GO:0019860 "uracil metabolic process"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0034097
"response to cytokine stimulus" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IEA] [GO:0046078 "dUMP metabolic process" evidence=IEA]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IEA]
[GO:0048037 "cofactor binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEA] [GO:0051593 "response to folic acid"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=NAS]
[GO:0006260 "DNA replication" evidence=NAS] [GO:0006281 "DNA
repair" evidence=NAS] [GO:0046683 "response to organophosphorus"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=TAS]
[GO:0009157 "deoxyribonucleoside monophosphate biosynthetic
process" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000083 "regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0004799
"thymidylate synthase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046134 "pyrimidine nucleoside biosynthetic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005743 GO:GO:0000166
GO:GO:0042493 GO:GO:0005759 GO:GO:0006260 GO:GO:0007568
GO:GO:0031100 GO:GO:0006206 GO:GO:0006281 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0048015
GO:GO:0046683 GO:GO:0000083 GO:GO:0005542 DrugBank:DB01101
DrugBank:DB00441 DrugBank:DB00544 DrugBank:DB00642 GO:GO:0046134
GO:GO:0006231 Orphanet:240839 Orphanet:240855 Orphanet:240955
Orphanet:240963 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235
DrugBank:DB00293 DrugBank:DB00322 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP EMBL:X02308 EMBL:D00596
EMBL:AB062290 EMBL:BC002567 EMBL:BC013919 EMBL:BC083512 EMBL:D00517
IPI:IPI00221108 PIR:A23047 RefSeq:NP_001062.1 UniGene:Hs.369762
PDB:1HVY PDB:1HW3 PDB:1HW4 PDB:1HZW PDB:1I00 PDB:1JU6 PDB:1JUJ
PDB:1YPV PDB:2ONB PDB:2RD8 PDB:2RDA PDB:3EAW PDB:3EBU PDB:3ED7
PDB:3EDW PDB:3EF9 PDB:3EGY PDB:3EHI PDB:3EJL PDB:3GG5 PDB:3GH0
PDB:3GH2 PDB:3H9K PDB:3HB8 PDB:3N5E PDB:3N5G PDB:3OB7 PDB:4E28
PDB:4GYH PDB:4H1I PDBsum:1HVY PDBsum:1HW3 PDBsum:1HW4 PDBsum:1HZW
PDBsum:1I00 PDBsum:1JU6 PDBsum:1JUJ PDBsum:1YPV PDBsum:2ONB
PDBsum:2RD8 PDBsum:2RDA PDBsum:3EAW PDBsum:3EBU PDBsum:3ED7
PDBsum:3EDW PDBsum:3EF9 PDBsum:3EGY PDBsum:3EHI PDBsum:3EJL
PDBsum:3GG5 PDBsum:3GH0 PDBsum:3GH2 PDBsum:3H9K PDBsum:3HB8
PDBsum:3N5E PDBsum:3N5G PDBsum:3OB7 PDBsum:4E28 PDBsum:4GYH
PDBsum:4H1I DisProt:DP00073 ProteinModelPortal:P04818 SMR:P04818
IntAct:P04818 STRING:P04818 PhosphoSite:P04818 DMDM:136611
PaxDb:P04818 PRIDE:P04818 DNASU:7298 Ensembl:ENST00000323274
GeneID:7298 KEGG:hsa:7298 UCSC:uc010dka.1 GeneCards:GC18P000647
HGNC:HGNC:12441 HPA:CAB002784 MIM:188350 neXtProt:NX_P04818
PharmGKB:PA359 InParanoid:P04818 PhylomeDB:P04818
BioCyc:MetaCyc:HS11096-MONOMER SABIO-RK:P04818 BindingDB:P04818
ChEMBL:CHEMBL1952 ChiTaRS:TYMS DrugBank:DB00650 DrugBank:DB00432
EvolutionaryTrace:P04818 GenomeRNAi:7298 NextBio:28543
ArrayExpress:P04818 Bgee:P04818 CleanEx:HS_TYMS
Genevestigator:P04818 GermOnline:ENSG00000176890 GO:GO:0009157
GO:GO:0046078 GO:GO:0019088 Uniprot:P04818
Length = 313
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L IL
Sbjct: 223 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 282
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDFQI YNP +I +A+
Sbjct: 283 RKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313
>UNIPROTKB|Q8WYK3 [details] [associations]
symbol:TS "Thymidylate synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004799 "thymidylate synthase
activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 Pfam:PF00303
PRINTS:PR00108 GO:GO:0005737 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077208 IPI:IPI00103732 SMR:Q8WYK3 STRING:Q8WYK3
Ensembl:ENST00000323224 UCSC:uc010dkb.1 Uniprot:Q8WYK3
Length = 279
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L IL
Sbjct: 189 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 248
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDFQI YNP +I +A+
Sbjct: 249 RKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279
>UNIPROTKB|Q8WYK4 [details] [associations]
symbol:TS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077207 IPI:IPI00103733 SMR:Q8WYK4 STRING:Q8WYK4
Ensembl:ENST00000323250 UCSC:uc010dkc.1 H-InvDB:HIX0021150
Uniprot:Q8WYK4
Length = 230
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L IL
Sbjct: 140 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 199
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDFQI YNP +I +A+
Sbjct: 200 RKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230
>UNIPROTKB|I3LB48 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9823 "Sus
scrofa" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634 GO:GO:0005743
GO:GO:0005759 GO:GO:0046683 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
Ensembl:ENSSSCT00000031689 OMA:RINDFKA Uniprot:I3LB48
Length = 163
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDF+ T GD H+YLNH++ + QL R P P L IL
Sbjct: 73 VPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKIL 132
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDFQI YNP +I +A+
Sbjct: 133 RKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 163
>UNIPROTKB|F1PU23 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
EMBL:AAEX03005468 Ensembl:ENSCAFT00000029138 Uniprot:F1PU23
Length = 314
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L IL
Sbjct: 224 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 283
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+ + D+ EDFQI YNP +I +A+
Sbjct: 284 RRVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 314
>MGI|MGI:98878 [details] [associations]
symbol:Tyms "thymidylate synthase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=ISO]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0004799 "thymidylate
synthase activity" evidence=ISO] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0006231 "dTMP biosynthetic
process" evidence=ISO] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0046078 "dUMP
metabolic process" evidence=ISO] [GO:0048037 "cofactor binding"
evidence=ISO] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 MGI:MGI:98878
GO:GO:0005634 GO:GO:0005743 GO:GO:0000166 GO:GO:0042493
GO:GO:0005759 GO:GO:0007568 GO:GO:0031100 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0046683
GO:GO:0005542 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574
GO:GO:0006235 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL CTD:7298 HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP
GO:GO:0046078 GO:GO:0019088 EMBL:M13019 EMBL:M13352 EMBL:J02617
EMBL:M13347 EMBL:M13348 EMBL:M13349 EMBL:M13350 EMBL:M13351
EMBL:X14489 IPI:IPI00130734 PIR:A26323 RefSeq:NP_067263.1
UniGene:Mm.268395 PDB:3IHI PDB:4E5O PDB:4EB4 PDBsum:3IHI
PDBsum:4E5O PDBsum:4EB4 ProteinModelPortal:P07607 SMR:P07607
STRING:P07607 PhosphoSite:P07607 REPRODUCTION-2DPAGE:P07607
PaxDb:P07607 PRIDE:P07607 Ensembl:ENSMUST00000026846 GeneID:22171
KEGG:mmu:22171 InParanoid:P07607 BindingDB:P07607 ChEMBL:CHEMBL3160
EvolutionaryTrace:P07607 NextBio:302116 Bgee:P07607 CleanEx:MM_TYMS
Genevestigator:P07607 GermOnline:ENSMUSG00000025747 Uniprot:P07607
Length = 307
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGL+ GDF+ T GD H+YLNH++ + QL R P P L IL
Sbjct: 217 VPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKIL 276
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K ++ D+ EDFQI YNP +I +A+
Sbjct: 277 RKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307
>RGD|3921 [details] [associations]
symbol:Tyms "thymidylate synthetase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IPI] [GO:0004799 "thymidylate
synthase activity" evidence=IDA] [GO:0005542 "folic acid binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0005976 "polysaccharide
metabolic process" evidence=IEP] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006231 "dTMP biosynthetic
process" evidence=IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0007568 "aging" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008144 "drug binding"
evidence=IPI] [GO:0009636 "response to toxic substance" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0019088 "immortalization of host cell by virus" evidence=IEP]
[GO:0019860 "uracil metabolic process" evidence=IEP] [GO:0031100
"organ regeneration" evidence=IEP] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0033189 "response to vitamin
A" evidence=IEP] [GO:0034097 "response to cytokine stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0046078 "dUMP
metabolic process" evidence=IDA] [GO:0046653 "tetrahydrofolate
metabolic process" evidence=IEP] [GO:0046683 "response to
organophosphorus" evidence=IEA;ISO] [GO:0048037 "cofactor binding"
evidence=IDA] [GO:0048589 "developmental growth" evidence=IEP]
[GO:0051216 "cartilage development" evidence=IEP] [GO:0051384
"response to glucocorticoid stimulus" evidence=IEP] [GO:0051593
"response to folic acid" evidence=IEP] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 RGD:3921 GO:GO:0042803 GO:GO:0005730
GO:GO:0005743 GO:GO:0000166 GO:GO:0042493 GO:GO:0045471 GO:GO:0005759
GO:GO:0008144 GO:GO:0009636 GO:GO:0007568 GO:GO:0031100 GO:GO:0007623
GO:GO:0034097 GO:GO:0003729 GO:GO:0051384 GO:GO:0051593 GO:GO:0048037
GO:GO:0051216 GO:GO:0032570 GO:GO:0048589 GO:GO:0046683 GO:GO:0033189
GO:GO:0046653 GO:GO:0005542 GO:GO:0005976 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP GeneTree:ENSGT00390000014786
GO:GO:0046078 GO:GO:0019088 EMBL:L12138 EMBL:BC126093 IPI:IPI00207230
PIR:S53715 RefSeq:NP_062052.1 UniGene:Rn.162284 PDB:1RTS PDB:2TSR
PDBsum:1RTS PDBsum:2TSR ProteinModelPortal:P45352 SMR:P45352
STRING:P45352 PhosphoSite:P45352 Ensembl:ENSRNOT00000056243
GeneID:29261 KEGG:rno:29261 InParanoid:P45352 SABIO-RK:P45352
BindingDB:P45352 ChEMBL:CHEMBL4341 EvolutionaryTrace:P45352
NextBio:608588 Genevestigator:P45352 GermOnline:ENSRNOG00000037225
GO:GO:0019860 Uniprot:P45352
Length = 307
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGL+ GDF+ T GD H+YLNH++ + QL R P P L IL
Sbjct: 217 VPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 276
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K ++ D+ EDFQI YNP +I +A+
Sbjct: 277 RKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307
>UNIPROTKB|Q0C504 [details] [associations]
symbol:thyA "Thymidylate synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GO:GO:0009265 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:YP_759189.1 ProteinModelPortal:Q0C504 SMR:Q0C504
STRING:Q0C504 GeneID:4287829 KEGG:hne:HNE_0459 PATRIC:32213710
BioCyc:HNEP228405:GI69-503-MONOMER Uniprot:Q0C504
Length = 264
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/93 (50%), Positives = 63/93 (67%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++A TGL+ G+F+ T GD HLYLNHL+QA QL R P LP TI
Sbjct: 174 VPFNIASYALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLP--TIH 231
Query: 168 CKP-KSSL-DYNFEDFQINSYNPQKSIYAPIAI 198
P K+ L + +EDF+++ Y P I AP+A+
Sbjct: 232 MNPDKADLFGWEYEDFRVDGYAPHPHIKAPVAV 264
>ZFIN|ZDB-GENE-040426-59 [details] [associations]
symbol:tyms "thymidylate synthase" species:7955
"Danio rerio" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;IDA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0042083
"5,10-methylenetetrahydrofolate-dependent methyltransferase
activity" evidence=IDA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 ZFIN:ZDB-GENE-040426-59
GO:GO:0060041 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 HSSP:P04818 CTD:7298 HOVERGEN:HBG001934 EMBL:AY005804
IPI:IPI00510414 RefSeq:NP_571835.1 UniGene:Dr.1047
ProteinModelPortal:Q9DGH5 SMR:Q9DGH5 STRING:Q9DGH5 GeneID:81540
KEGG:dre:81540 InParanoid:Q9DGH5 NextBio:20934154
ArrayExpress:Q9DGH5 Uniprot:Q9DGH5
Length = 319
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDF+ T GD H+Y NH++ ++Q+ R P P L I
Sbjct: 229 VPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQREPRPFPKLRIK 288
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
K + D+ EDF+I Y+P +I +A+
Sbjct: 289 RKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319
>UNIPROTKB|F1MY63 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 IPI:IPI00708073 UniGene:Bt.7738
GeneTree:ENSGT00390000014786 EMBL:DAAA02056661
Ensembl:ENSBTAT00000009214 OMA:HDSIFDY Uniprot:F1MY63
Length = 354
Score = 152 (58.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLL 155
+PFNIASY+LL ++IAH T LK GDF+ T GD H+YLNH++ + Q L
Sbjct: 226 VPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQAL 273
Score = 88 (36.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 153 QLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+L R P P L IL K ++ D+ EDFQI YNP +I +A+
Sbjct: 309 ELQREPRPFPKLKILRKVETIDDFQAEDFQIEGYNPHPTIKMEMAV 354
>UNIPROTKB|Q2TA32 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006235 "dTTP
biosynthetic process" evidence=IEA] [GO:0004799 "thymidylate
synthase activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 EMBL:BC111139 EMBL:AH009263
IPI:IPI00708073 RefSeq:NP_001032905.1 UniGene:Bt.7738 HSSP:P04818
ProteinModelPortal:Q2TA32 SMR:Q2TA32 STRING:Q2TA32 PRIDE:Q2TA32
GeneID:507631 KEGG:bta:507631 CTD:7298 HOVERGEN:HBG001934
InParanoid:Q2TA32 OrthoDB:EOG4ZKJMP NextBio:20868149 Uniprot:Q2TA32
Length = 354
Score = 152 (58.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLL 155
+PFNIASY+LL ++IAH T LK GDF+ T GD H+YLNH++ + Q L
Sbjct: 226 VPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQAL 273
Score = 88 (36.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 153 QLLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+L R P P L IL K ++ D+ EDFQI YNP +I +A+
Sbjct: 309 ELQREPRPFPKLKILRKVETIDDFQAEDFQIEGYNPNPTIKMEMAV 354
>UNIPROTKB|F1PNL9 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0046683 "response to organophosphorus"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0046683
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468 OMA:HDSIFDY
Ensembl:ENSCAFT00000036918 Uniprot:F1PNL9
Length = 354
Score = 155 (59.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQ 153
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + Q
Sbjct: 224 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQ 269
Score = 82 (33.9 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 154 LLRNPGSLPNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
L R P P L IL + + D+ EDFQI YNP +I +A+
Sbjct: 310 LQREPRPFPKLRILRRVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 354
>UNIPROTKB|F1PNM3 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 UniPathway:UPA00575
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468
Ensembl:ENSCAFT00000018205 Uniprot:F1PNM3
Length = 135
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASY+LL ++IAH TGLK GDFI T GD H+YLNH++ + QL R P P L IL
Sbjct: 34 VPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRIL 93
Query: 168 CKPKSSLDYNFEDFQI 183
+ + D+ EDFQI
Sbjct: 94 RRVEKIDDFKAEDFQI 109
>SGD|S000005600 [details] [associations]
symbol:CDC21 "Thymidylate synthase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;TAS] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 SGD:S000005600
GO:GO:0005634 EMBL:BK006948 EMBL:Z70678 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 OrthoDB:EOG418FX9 EMBL:J02706
EMBL:Z74982 EMBL:M29100 PIR:S66957 RefSeq:NP_014717.2
ProteinModelPortal:P06785 SMR:P06785 DIP:DIP-2786N IntAct:P06785
MINT:MINT-562757 STRING:P06785 PaxDb:P06785 PeptideAtlas:P06785
EnsemblFungi:YOR074C GeneID:854241 KEGG:sce:YOR074C CYGD:YOR074c
NextBio:976141 Genevestigator:P06785 Uniprot:P06785
Length = 304
Score = 191 (72.3 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + +PFNIASY+LL +IA ++ G+FI T GD H+Y +H+D ++Q+ RNP
Sbjct: 208 CDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNPRPF 267
Query: 162 PNLTILCKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
P L I K D+ DF+I YNP I +++
Sbjct: 268 PKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304
>CGD|CAL0005915 [details] [associations]
symbol:CDC21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 CGD:CAL0005915
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0006231 DrugBank:DB01099
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
EMBL:J04230 PIR:A32805 RefSeq:XP_714908.1 RefSeq:XP_714971.1
ProteinModelPortal:P12461 SMR:P12461 STRING:P12461 GeneID:3643367
GeneID:3643463 KEGG:cal:CaO19.11033 KEGG:cal:CaO19.3549
Uniprot:P12461
Length = 315
Score = 189 (71.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + +PFNIASY+LL +IAH + G+FI T GD H+YL+H+D ++Q R P
Sbjct: 215 CDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGDAHVYLDHIDALKEQFERIPKQF 274
Query: 162 PNLTILCKPKSSL----DYNFEDFQINSYNPQKSIYAPI 196
P L I + K+ + D+ FEDF+I Y P Y PI
Sbjct: 275 PKLVIKEERKNEIKSIDDFKFEDFEIVGYEP----YPPI 309
>ASPGD|ASPL0000066643 [details] [associations]
symbol:AN7028 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004799 "thymidylate synthase activity"
evidence=RCA] [GO:0008616 "queuosine biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0008479 "queuine tRNA-ribosyltransferase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR002616 InterPro:IPR004803
InterPro:IPR020940 Pfam:PF00303 Pfam:PF01702 PRINTS:PR00108
PROSITE:PS00091 EMBL:BN001304 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0008616 GO:GO:0008479 Gene3D:3.20.20.105
SUPFAM:SSF51713 TIGRFAMs:TIGR00449 TIGRFAMs:TIGR00430
EnsemblFungi:CADANIAT00000445 Uniprot:C8VB77
Length = 674
Score = 191 (72.3 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + +PFNIASY+LL HIIAH T L G I T GD H+YL+H++ +QL R P
Sbjct: 575 CDMGLGVPFNIASYALLTHIIAHATDLNPGKLIHTMGDAHVYLDHVEALEEQLTREPTDF 634
Query: 162 PNLTILCKPKSS--LD-YNFEDFQINSYNPQKSIYAPIAI 198
P L I + + S +D + E+F++ Y P K+I +++
Sbjct: 635 PELKIKREDRGSGVIDGWKEEEFEVIGYAPHKAIKMKMSV 674
>POMBASE|SPAC15E1.04 [details] [associations]
symbol:SPAC15E1.04 "thymidylate synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006231 "dTMP biosynthetic process" evidence=ISS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISM]
InterPro:IPR000398 InterPro:IPR003382 InterPro:IPR020940
Pfam:PF00303 Pfam:PF02441 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 PomBase:SPAC15E1.04 GO:GO:0005829 EMBL:CU329670
GO:GO:0050660 eggNOG:COG0452 KO:K01598 Gene3D:3.40.50.1950
SUPFAM:SSF52507 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
PIR:T37719 RefSeq:NP_594305.1 HSSP:P13100 ProteinModelPortal:Q9UTI7
SMR:Q9UTI7 STRING:Q9UTI7 EnsemblFungi:SPAC15E1.04.1 GeneID:2542801
KEGG:spo:SPAC15E1.04 OrthoDB:EOG418FX9 NextBio:20803844
Uniprot:Q9UTI7
Length = 625
Score = 188 (71.2 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 40/92 (43%), Positives = 55/92 (59%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL H+IAH G + +F+ GDCH+Y +HL+ + QL R P + P L
Sbjct: 532 VPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHIYNDHLEALQTQLERVPKAFPKLFFK 591
Query: 168 --CKPKSSLD-YNFEDFQINSYNPQKSIYAPI 196
K S+D ++ +DF + YNP Y PI
Sbjct: 592 RDAKDIGSIDSFSVDDFAVEGYNP----YGPI 619
>UNIPROTKB|G4MSD5 [details] [associations]
symbol:MGG_04458 "Thymidylate synthase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
EMBL:CM001232 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 RefSeq:XP_003713554.1 ProteinModelPortal:G4MSD5
SMR:G4MSD5 EnsemblFungi:MGG_04458T0 GeneID:2678156
KEGG:mgr:MGG_04458 Uniprot:G4MSD5
Length = 339
Score = 172 (65.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 41/103 (39%), Positives = 57/103 (55%)
Query: 103 CET-IRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSL 161
C+ + +PFNIASY+LL H+IA TGL G GD H+Y +H+D R QL R P
Sbjct: 237 CDMGLGVPFNIASYALLTHMIARATGLVPGSLTHVMGDAHVYADHVDALRTQLEREPRPF 296
Query: 162 PNLTILCK--PKSS---LD-YNFEDFQINSYNPQKSIYAPIAI 198
P L I P+ +D + EDF I Y+P K+I +++
Sbjct: 297 PELEINRPEVPEGGDGVIDGWKLEDFVIKGYDPHKAIAMKMSV 339
>TAIR|locus:2139544 [details] [associations]
symbol:THY-2 "thymidylate synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006545 "glycine biosynthetic process"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009257
"10-formyltetrahydrofolate biosynthetic process" evidence=ISS]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 InterPro:IPR020940 Pfam:PF00186 Pfam:PF00303
PIRSF:PIRSF000389 PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS00091
PROSITE:PS51330 UniPathway:UPA00077 InterPro:IPR024072
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006730 EMBL:AL161585
EMBL:AL023094 GO:GO:0009257 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 KO:K13998 ProtClustDB:CLSN2683596
GO:GO:0004146 GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10
Gene3D:3.40.430.10 InterPro:IPR023451 SUPFAM:SSF53597
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 EMBL:L08594 EMBL:AK227728
EMBL:BT003159 IPI:IPI00526255 PIR:T05277 RefSeq:NP_195183.2
UniGene:At.31491 ProteinModelPortal:Q05763 SMR:Q05763 STRING:Q05763
PaxDb:Q05763 PRIDE:Q05763 EnsemblPlants:AT4G34570.1 GeneID:829609
KEGG:ath:AT4G34570 TAIR:At4g34570 InParanoid:Q05763 OMA:CEAVHLT
PhylomeDB:Q05763 Genevestigator:Q05763 GermOnline:AT4G34570
Uniprot:Q05763
Length = 565
Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL I+AH L GDFI GD H+Y NH+ ++QL P P L I
Sbjct: 475 VPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENPPKPFPVLKIN 534
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+ K + +DF++ Y+P K I +A+
Sbjct: 535 PEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565
>TAIR|locus:2042649 [details] [associations]
symbol:THY-1 "thymidylate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA] [GO:0006545
"glycine biosynthetic process" evidence=IEA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009257 "10-formyltetrahydrofolate biosynthetic
process" evidence=ISS] InterPro:IPR000398 InterPro:IPR001796
InterPro:IPR012262 InterPro:IPR017925 InterPro:IPR020940
Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389 PRINTS:PR00108
PROSITE:PS00075 PROSITE:PS00091 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006730 EMBL:AC007047 GO:GO:0009257
GO:GO:0006231 EMBL:L08593 EMBL:AY063968 EMBL:AY114032
IPI:IPI00530946 PIR:E84539 RefSeq:NP_179230.1 UniGene:At.27124
ProteinModelPortal:Q05762 SMR:Q05762 IntAct:Q05762 STRING:Q05762
PaxDb:Q05762 PRIDE:Q05762 EnsemblPlants:AT2G16370.1 GeneID:816134
KEGG:ath:AT2G16370 TAIR:At2g16370 eggNOG:COG0262
HOGENOM:HOG000257901 InParanoid:Q05762 KO:K13998 OMA:NGPACEA
PhylomeDB:Q05762 ProtClustDB:CLSN2683596 Genevestigator:Q05762
GermOnline:AT2G16370 GO:GO:0004146 GO:GO:0004799 GO:GO:0006545
Gene3D:3.30.572.10 Gene3D:3.40.430.10 InterPro:IPR023451
SUPFAM:SSF53597 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 Uniprot:Q05762
Length = 519
Score = 163 (62.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFNIASYSLL ++AH L GDFI GD H+Y H+ ++QLL P P + I
Sbjct: 429 VPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNLPKPFPVMKIN 488
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
+ K + DF + Y+P K I +A+
Sbjct: 489 PEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519
>WB|WBGene00022455 [details] [associations]
symbol:Y110A7A.4 species:6239 "Caenorhabditis elegans"
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA;IDA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0009792
GO:GO:0010171 EMBL:FO080728 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
OMA:DTNVAYL HSSP:P04818 GeneTree:ENSGT00390000014786
RefSeq:NP_491532.3 ProteinModelPortal:Q9N588 SMR:Q9N588
STRING:Q9N588 PaxDb:Q9N588 EnsemblMetazoa:Y110A7A.4 GeneID:172149
KEGG:cel:CELE_Y110A7A.4 UCSC:Y110A7A.4 CTD:172149
WormBase:Y110A7A.4 InParanoid:Q9N588 NextBio:874229
ArrayExpress:Q9N588 Uniprot:Q9N588
Length = 312
Score = 152 (58.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 108 LPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTIL 167
+PFN+ASY LL H+IA GLK G + T GD H+Y NH+D + QL R P + P +
Sbjct: 222 VPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQLDREPYAFPKIRFT 281
Query: 168 CKPKSSLDYNFEDFQINSYNPQKSIYAPIAI 198
S D+ + ++ Y I +A+
Sbjct: 282 RDVASIDDFTSDMIALDDYKCHPKIPMDMAV 312
>TAIR|locus:2049389 [details] [associations]
symbol:AT2G21550 species:3702 "Arabidopsis thaliana"
[GO:0004146 "dihydrofolate reductase activity" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0006545 "glycine
biosynthetic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389
PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006730 GO:GO:0046654 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 ProtClustDB:CLSN2683596 GO:GO:0004146
GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10 Gene3D:3.40.430.10
InterPro:IPR023451 SUPFAM:SSF53597 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:AC007119 HSSP:P13100 IPI:IPI00533060
PIR:F84602 RefSeq:NP_179750.1 UniGene:At.50088
ProteinModelPortal:Q9SIK4 SMR:Q9SIK4 STRING:Q9SIK4
EnsemblPlants:AT2G21550.1 GeneID:816694 KEGG:ath:AT2G21550
TAIR:At2g21550 InParanoid:Q9SIK4 OMA:CHNIAID PhylomeDB:Q9SIK4
ArrayExpress:Q9SIK4 Genevestigator:Q9SIK4 Uniprot:Q9SIK4
Length = 492
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 105 TIRLPFNIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNL 164
+I +PF+IA+YSLL IIAH L GDFI G ++ H+ +KQL +P P L
Sbjct: 411 SIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKPFPIL 470
Query: 165 TILCKP-KSSLDYNFE 179
I P K +D NFE
Sbjct: 471 KI--NPEKKKMD-NFE 483
>UNIPROTKB|P67049 [details] [associations]
symbol:thyA "Thymidylate synthase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005737 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
GO:GO:0006235 eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827
PIR:E95077 RefSeq:NP_345174.1 ProteinModelPortal:P67049
IntAct:P67049 EnsemblBacteria:EBSTRT00000026100 GeneID:930618
KEGG:spn:SP_0669 PATRIC:19705703 HOGENOM:HOG000257898 OMA:ANPWNRR
Uniprot:P67049
Length = 279
Score = 108 (43.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 111 NIASYSLLIHIIAHETGLKVGDFIWTGGDCHLYLNHLDQARKQLLRNPGSLPNLTILCKP 170
N Y L +IA G KVG F + + H+Y N +QA++ L R P + +L P
Sbjct: 189 NAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVP 248
Query: 171 KSS--LDYNFEDFQINSYNPQK 190
+ D EDF++ Y+P K
Sbjct: 249 DGTNFFDIKAEDFELVDYDPVK 270
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.456 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 156 0.00073 106 3 11 22 0.45 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 603 (64 KB)
Total size of DFA: 167 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.30u 0.12s 14.42t Elapsed: 00:00:04
Total cpu time: 14.30u 0.12s 14.42t Elapsed: 00:00:04
Start: Thu Aug 15 15:07:17 2013 End: Thu Aug 15 15:07:21 2013