Query psy2417
Match_columns 391
No_of_seqs 257 out of 2342
Neff 9.6
Searched_HMMs 46136
Date Sat Aug 17 00:25:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2417.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2417hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256|consensus 100.0 5E-52 1.1E-56 400.9 36.2 319 72-390 64-394 (691)
2 KOG1180|consensus 100.0 5E-46 1.1E-50 344.9 28.5 326 60-390 17-379 (678)
3 PLN02614 long-chain acyl-CoA s 100.0 4.8E-43 1E-47 357.7 40.6 324 60-385 22-355 (666)
4 PLN02861 long-chain-fatty-acid 100.0 1.3E-42 2.7E-47 354.6 41.1 326 60-388 20-355 (660)
5 PLN02430 long-chain-fatty-acid 100.0 2.5E-42 5.3E-47 352.1 40.8 330 60-389 19-356 (660)
6 PTZ00342 acyl-CoA synthetase; 100.0 1.3E-42 2.8E-47 354.9 38.4 326 56-387 36-435 (746)
7 PLN02736 long-chain acyl-CoA s 100.0 8E-42 1.7E-46 348.9 39.9 322 59-384 17-347 (651)
8 PLN02387 long-chain-fatty-acid 100.0 1.6E-41 3.6E-46 348.0 38.3 319 66-387 41-389 (696)
9 COG1022 FAA1 Long-chain acyl-C 100.0 2.6E-41 5.6E-46 330.9 32.0 300 81-387 14-321 (613)
10 KOG1177|consensus 100.0 1E-41 2.3E-46 311.4 24.8 290 81-386 48-365 (596)
11 PTZ00216 acyl-CoA synthetase; 100.0 5.1E-40 1.1E-44 337.6 38.4 302 80-388 66-404 (700)
12 PTZ00297 pantothenate kinase; 100.0 7.8E-39 1.7E-43 340.0 37.1 303 80-388 424-732 (1452)
13 PRK12467 peptide synthase; Pro 100.0 4E-40 8.6E-45 385.8 24.4 332 22-386 1492-1849(3956)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 6.8E-39 1.5E-43 309.8 25.8 281 88-388 14-307 (528)
15 PRK12467 peptide synthase; Pro 100.0 5.7E-40 1.2E-44 384.5 21.5 323 27-385 3018-3365(3956)
16 PRK08180 feruloyl-CoA synthase 100.0 3.4E-38 7.4E-43 320.2 28.6 291 82-385 38-348 (614)
17 TIGR02316 propion_prpE propion 100.0 2.6E-38 5.7E-43 321.8 26.3 295 84-385 53-368 (628)
18 TIGR03443 alpha_am_amid L-amin 100.0 6.5E-39 1.4E-43 352.9 22.9 348 26-385 158-543 (1389)
19 PRK10252 entF enterobactin syn 100.0 6.9E-39 1.5E-43 351.1 22.9 324 25-385 379-731 (1296)
20 PLN03052 acetate--CoA ligase; 100.0 4.5E-38 9.8E-43 322.9 26.8 293 83-384 174-484 (728)
21 PLN02654 acetate-CoA ligase 100.0 6.6E-38 1.4E-42 320.3 27.9 298 85-386 90-412 (666)
22 PLN02860 o-succinylbenzoate-Co 100.0 3.1E-38 6.7E-43 317.7 24.9 289 81-383 5-300 (563)
23 PRK05691 peptide synthase; Val 100.0 7.4E-39 1.6E-43 378.0 23.7 327 27-386 3643-3998(4334)
24 COG0318 CaiC Acyl-CoA syntheta 100.0 3.9E-38 8.5E-43 314.0 24.9 284 81-383 9-303 (534)
25 PRK07788 acyl-CoA synthetase; 100.0 5.9E-38 1.3E-42 314.8 24.8 283 83-385 49-337 (549)
26 PRK12582 acyl-CoA synthetase; 100.0 1.8E-37 3.9E-42 315.5 27.9 293 80-385 46-360 (624)
27 PRK12316 peptide synthase; Pro 100.0 3.1E-38 6.7E-43 375.3 25.4 325 27-385 1926-2275(5163)
28 PRK12316 peptide synthase; Pro 100.0 2.4E-38 5.1E-43 376.4 24.0 328 26-386 432-785 (5163)
29 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.6E-37 3.5E-42 316.2 26.6 296 83-386 57-373 (625)
30 PRK07529 AMP-binding domain pr 100.0 3.6E-37 7.9E-42 313.5 27.9 299 82-385 24-347 (632)
31 PTZ00237 acetyl-CoA synthetase 100.0 2.9E-37 6.2E-42 314.6 26.5 302 82-386 58-395 (647)
32 PRK05691 peptide synthase; Val 100.0 7.4E-38 1.6E-42 369.6 25.0 329 26-385 2109-2462(4334)
33 PRK06334 long chain fatty acid 100.0 4.8E-37 1E-41 307.2 26.3 280 82-385 18-313 (539)
34 PRK13295 cyclohexanecarboxylat 100.0 8.8E-37 1.9E-41 306.1 27.8 287 82-385 23-326 (547)
35 PRK00174 acetyl-CoA synthetase 100.0 9.3E-37 2E-41 311.2 28.0 292 85-385 69-381 (637)
36 PRK10524 prpE propionyl-CoA sy 100.0 7.4E-37 1.6E-41 311.6 26.5 295 85-386 55-370 (629)
37 PRK03584 acetoacetyl-CoA synth 100.0 1.8E-36 3.9E-41 309.9 27.0 299 76-385 79-397 (655)
38 PRK03640 O-succinylbenzoic aci 100.0 3E-36 6.6E-41 297.7 25.8 265 83-384 2-267 (483)
39 PRK08314 long-chain-fatty-acid 100.0 7.4E-36 1.6E-40 299.4 28.1 291 82-384 9-318 (546)
40 TIGR03098 ligase_PEP_1 acyl-Co 100.0 4.5E-36 9.7E-41 298.8 26.2 284 84-384 1-287 (515)
41 KOG1176|consensus 100.0 1.2E-36 2.5E-41 295.8 20.9 283 95-389 28-317 (537)
42 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5.3E-36 1.1E-40 305.7 26.8 300 76-386 80-399 (652)
43 PF00501 AMP-binding: AMP-bind 100.0 1.6E-36 3.5E-41 294.1 21.3 272 89-386 1-292 (417)
44 PLN02246 4-coumarate--CoA liga 100.0 1.1E-35 2.3E-40 297.7 27.5 285 79-383 19-310 (537)
45 PRK04319 acetyl-CoA synthetase 100.0 6.3E-36 1.4E-40 301.4 25.3 287 83-385 43-337 (570)
46 PRK05620 long-chain-fatty-acid 100.0 1.4E-35 2.9E-40 299.3 27.4 295 81-384 8-311 (576)
47 PRK13382 acyl-CoA synthetase; 100.0 1.4E-35 2.9E-40 296.8 27.0 279 82-385 42-326 (537)
48 PRK09274 peptide synthase; Pro 100.0 1.1E-35 2.4E-40 298.6 25.4 282 83-384 6-301 (552)
49 PRK07656 long-chain-fatty-acid 100.0 2.7E-35 5.8E-40 293.0 27.7 286 82-384 4-294 (513)
50 PRK06187 long-chain-fatty-acid 100.0 2.9E-35 6.4E-40 293.1 27.8 287 81-384 4-294 (521)
51 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.1E-35 6.7E-40 294.4 28.0 287 82-385 21-324 (538)
52 PLN03102 acyl-activating enzym 100.0 1.7E-35 3.8E-40 298.4 25.8 286 83-383 14-312 (579)
53 PRK06155 crotonobetaine/carnit 100.0 3E-35 6.4E-40 294.6 26.7 281 81-380 19-303 (542)
54 PRK05605 long-chain-fatty-acid 100.0 5E-35 1.1E-39 295.1 28.4 294 82-383 31-348 (573)
55 PRK06164 acyl-CoA synthetase; 100.0 4.4E-35 9.5E-40 293.5 27.5 288 78-380 5-303 (540)
56 PRK08008 caiC putative crotono 100.0 8.6E-35 1.9E-39 289.8 28.4 286 82-380 6-297 (517)
57 PRK05857 acyl-CoA synthetase; 100.0 8E-36 1.7E-40 298.7 20.5 282 82-383 13-298 (540)
58 PRK06839 acyl-CoA synthetase; 100.0 5.5E-35 1.2E-39 289.6 25.8 268 84-383 3-276 (496)
59 PRK07008 long-chain-fatty-acid 100.0 8.4E-35 1.8E-39 291.3 27.1 291 82-385 9-307 (539)
60 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.6E-35 1.4E-39 291.3 26.2 284 81-386 21-314 (527)
61 PRK08043 bifunctional acyl-[ac 100.0 2E-35 4.4E-40 304.9 22.9 281 81-386 202-494 (718)
62 PRK05677 long-chain-fatty-acid 100.0 1.5E-34 3.2E-39 291.0 28.2 295 83-385 24-340 (562)
63 PRK06087 short chain acyl-CoA 100.0 9E-35 1.9E-39 291.7 26.5 284 82-384 22-315 (547)
64 PRK06060 acyl-CoA synthetase; 100.0 4.5E-35 9.7E-40 302.0 24.9 264 83-385 4-274 (705)
65 PRK08316 acyl-CoA synthetase; 100.0 1.2E-34 2.6E-39 289.0 27.0 286 82-384 10-299 (523)
66 PRK12583 acyl-CoA synthetase; 100.0 1.7E-34 3.6E-39 290.4 27.5 286 82-384 17-330 (558)
67 PRK08315 AMP-binding domain pr 100.0 2.6E-34 5.7E-39 289.0 29.0 287 81-384 14-328 (559)
68 PRK07769 long-chain-fatty-acid 100.0 1.4E-34 3E-39 294.9 27.0 277 81-384 19-319 (631)
69 PRK08279 long-chain-acyl-CoA s 100.0 5.5E-34 1.2E-38 289.0 31.1 263 81-363 35-305 (600)
70 PRK05852 acyl-CoA synthetase; 100.0 1E-34 2.2E-39 290.4 25.1 288 80-383 13-307 (534)
71 PRK07470 acyl-CoA synthetase; 100.0 1.5E-34 3.2E-39 288.9 26.1 284 81-385 5-294 (528)
72 PLN02479 acetate-CoA ligase 100.0 1.7E-34 3.7E-39 290.7 26.3 291 83-383 20-322 (567)
73 COG1021 EntE Peptide arylation 100.0 8.8E-36 1.9E-40 267.0 14.9 286 81-388 26-322 (542)
74 PRK07638 acyl-CoA synthetase; 100.0 1.6E-34 3.4E-39 285.9 25.3 263 84-383 2-265 (487)
75 PRK06018 putative acyl-CoA syn 100.0 2.6E-34 5.7E-39 287.9 26.6 293 81-385 8-308 (542)
76 PRK07786 long-chain-fatty-acid 100.0 1.8E-34 3.8E-39 289.2 24.7 282 81-384 15-303 (542)
77 PRK12476 putative fatty-acid-- 100.0 4.9E-34 1.1E-38 289.8 27.0 278 80-384 31-330 (612)
78 PRK07867 acyl-CoA synthetase; 100.0 7.2E-34 1.6E-38 283.7 26.3 253 81-363 3-258 (529)
79 PRK07514 malonyl-CoA synthase; 100.0 9E-34 2E-38 281.6 26.6 276 82-383 2-281 (504)
80 PRK06188 acyl-CoA synthetase; 100.0 1.1E-33 2.4E-38 282.3 26.7 277 82-383 11-293 (524)
81 PRK07798 acyl-CoA synthetase; 100.0 1.6E-33 3.5E-38 281.5 27.9 285 84-383 4-308 (533)
82 PRK06145 acyl-CoA synthetase; 100.0 1.1E-33 2.3E-38 280.6 26.4 274 83-385 2-278 (497)
83 PLN02330 4-coumarate--CoA liga 100.0 1.2E-33 2.6E-38 283.4 26.5 286 80-385 25-317 (546)
84 PLN02574 4-coumarate--CoA liga 100.0 9.1E-34 2E-38 285.1 24.6 282 86-384 44-332 (560)
85 PRK13388 acyl-CoA synthetase; 100.0 4.5E-33 9.8E-38 278.7 29.3 251 83-363 3-256 (540)
86 TIGR03205 pimA dicarboxylate-- 100.0 3E-33 6.5E-38 280.2 27.7 295 82-384 20-325 (541)
87 PRK05851 long-chain-fatty-acid 100.0 6.6E-34 1.4E-38 283.9 22.4 266 85-384 4-285 (525)
88 PRK08633 2-acyl-glycerophospho 100.0 1.5E-33 3.3E-38 305.7 26.3 287 80-385 612-912 (1146)
89 PRK08162 acyl-CoA synthetase; 100.0 3.6E-33 7.8E-38 280.0 26.6 287 83-382 18-307 (545)
90 KOG1179|consensus 100.0 4.6E-33 9.9E-38 259.9 24.0 265 80-364 74-349 (649)
91 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.4E-33 5.2E-38 278.4 23.5 265 84-383 1-270 (502)
92 PRK13383 acyl-CoA synthetase; 100.0 3.6E-33 7.8E-38 278.1 24.1 268 81-385 33-306 (516)
93 PRK07059 Long-chain-fatty-acid 100.0 1.3E-32 2.8E-37 276.6 27.4 295 82-383 22-339 (557)
94 PRK12492 long-chain-fatty-acid 100.0 7.6E-33 1.6E-37 278.5 25.5 296 83-385 24-347 (562)
95 PRK04813 D-alanine--poly(phosp 100.0 9E-33 1.9E-37 274.2 25.6 264 83-383 2-272 (503)
96 PRK10946 entE enterobactin syn 100.0 5E-33 1.1E-37 278.3 23.8 277 82-384 24-313 (536)
97 PRK06814 acylglycerophosphoeth 100.0 6.7E-33 1.5E-37 300.2 26.4 283 81-385 629-921 (1140)
98 TIGR02262 benz_CoA_lig benzoat 100.0 1.9E-32 4.1E-37 272.4 27.3 279 84-384 5-291 (508)
99 PRK06178 acyl-CoA synthetase; 100.0 2.5E-32 5.3E-37 275.2 28.1 285 82-376 32-330 (567)
100 PRK08751 putative long-chain f 100.0 1.6E-32 3.6E-37 276.0 26.5 294 83-383 25-341 (560)
101 PRK06710 long-chain-fatty-acid 100.0 3.8E-32 8.3E-37 273.6 28.8 293 83-385 24-337 (563)
102 PRK09088 acyl-CoA synthetase; 100.0 1.2E-32 2.5E-37 272.6 24.1 257 90-384 2-265 (488)
103 PRK05850 acyl-CoA synthetase; 100.0 1.3E-32 2.8E-37 277.8 24.7 275 84-383 2-300 (578)
104 PRK09192 acyl-CoA synthetase; 100.0 3.6E-32 7.8E-37 274.5 24.2 279 79-385 17-313 (579)
105 PRK07868 acyl-CoA synthetase; 100.0 4.8E-32 1E-36 287.1 25.2 278 80-377 444-726 (994)
106 PRK13390 acyl-CoA synthetase; 100.0 9.4E-32 2E-36 266.9 25.4 268 91-383 5-282 (501)
107 PRK08974 long-chain-fatty-acid 100.0 1.5E-31 3.2E-36 269.2 26.9 294 82-383 22-337 (560)
108 PRK07768 long-chain-fatty-acid 100.0 7.9E-32 1.7E-36 270.2 24.7 268 83-383 2-288 (545)
109 PRK09029 O-succinylbenzoic aci 100.0 1.1E-31 2.3E-36 263.6 22.2 243 90-383 10-252 (458)
110 PRK07787 acyl-CoA synthetase; 100.0 5.4E-32 1.2E-36 266.7 19.8 243 93-384 10-254 (471)
111 PRK08308 acyl-CoA synthetase; 100.0 1.5E-31 3.2E-36 259.2 22.3 216 113-383 7-224 (414)
112 PRK13391 acyl-CoA synthetase; 100.0 9.5E-31 2.1E-35 260.4 25.2 273 90-383 4-287 (511)
113 PRK07445 O-succinylbenzoic aci 100.0 6.1E-31 1.3E-35 257.3 18.8 222 114-383 19-242 (452)
114 COG1020 EntF Non-ribosomal pep 100.0 1.1E-30 2.4E-35 266.9 21.3 316 27-381 155-495 (642)
115 PRK12406 long-chain-fatty-acid 100.0 1.8E-30 4E-35 258.2 22.1 263 113-384 10-284 (509)
116 TIGR01923 menE O-succinylbenzo 100.0 1.8E-30 4E-35 253.1 20.4 231 116-383 1-231 (436)
117 TIGR01733 AA-adenyl-dom amino 100.0 6.3E-30 1.4E-34 247.1 22.5 244 116-386 1-249 (408)
118 PRK08276 long-chain-fatty-acid 100.0 7.3E-30 1.6E-34 253.5 22.7 257 113-385 10-276 (502)
119 TIGR03089 conserved hypothetic 100.0 3E-28 6.4E-33 215.4 21.7 223 89-348 2-227 (227)
120 PLN03051 acyl-activating enzym 100.0 7.1E-29 1.5E-33 246.1 18.3 231 146-383 1-248 (499)
121 KOG1175|consensus 100.0 1.8E-28 3.9E-33 238.3 19.1 296 76-388 56-376 (626)
122 KOG3628|consensus 99.8 1.4E-18 3E-23 173.1 24.5 262 83-363 770-1053(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.7 4.9E-16 1.1E-20 148.2 10.5 120 256-384 95-218 (386)
124 PRK07824 O-succinylbenzoic aci 99.6 1E-15 2.2E-20 145.5 9.3 128 253-385 32-165 (358)
125 KOG1178|consensus 99.6 1.1E-14 2.5E-19 149.2 9.9 257 81-363 34-305 (1032)
126 TIGR02155 PA_CoA_ligase phenyl 99.4 4.5E-13 9.8E-18 130.2 7.8 129 254-385 73-209 (422)
127 TIGR03335 F390_ftsA coenzyme F 99.2 1.7E-11 3.6E-16 119.8 8.1 127 254-384 84-217 (445)
128 KOG3628|consensus 99.2 9.8E-11 2.1E-15 118.0 9.5 259 79-359 90-374 (1363)
129 COG1541 PaaK Coenzyme F390 syn 98.5 2.1E-07 4.5E-12 88.1 7.2 135 254-388 88-227 (438)
130 TIGR02304 aden_form_hyp probab 97.3 0.0011 2.4E-08 64.2 8.5 122 258-385 101-226 (430)
131 COG1541 PaaK Coenzyme F390 syn 95.0 0.17 3.8E-06 48.5 9.7 106 112-219 107-222 (438)
132 PF04443 LuxE: Acyl-protein sy 90.2 5.5 0.00012 37.9 12.1 132 254-386 87-235 (365)
133 TIGR03335 F390_ftsA coenzyme F 86.0 6.2 0.00013 38.7 10.0 81 112-195 103-185 (445)
134 PF13745 HxxPF_rpt: HxxPF-repe 85.9 0.1 2.2E-06 38.4 -2.0 39 14-53 49-87 (91)
135 TIGR02155 PA_CoA_ligase phenyl 84.1 7.7 0.00017 37.6 9.7 83 112-195 92-176 (422)
136 TIGR03590 PseG pseudaminic aci 84.0 12 0.00026 34.1 10.3 91 122-218 18-112 (279)
137 PF03321 GH3: GH3 auxin-respon 80.1 1.9 4.2E-05 43.2 3.8 54 230-283 53-108 (528)
138 PF00501 AMP-binding: AMP-bind 79.6 14 0.00031 35.3 9.8 90 254-352 8-99 (417)
139 TIGR03089 conserved hypothetic 79.3 13 0.00028 32.7 8.5 54 132-187 171-226 (227)
140 PLN02249 indole-3-acetic acid- 74.4 2.1 4.6E-05 43.4 2.3 53 230-282 72-127 (597)
141 PRK13295 cyclohexanecarboxylat 73.9 32 0.0007 34.5 10.8 98 254-355 37-136 (547)
142 PLN02247 indole-3-acetic acid- 71.7 5.9 0.00013 40.2 4.6 55 230-284 61-118 (606)
143 PLN03102 acyl-activating enzym 70.6 48 0.001 33.6 11.2 97 254-360 27-125 (579)
144 PRK07656 long-chain-fatty-acid 70.5 51 0.0011 32.5 11.2 97 254-360 18-116 (513)
145 PRK09274 peptide synthase; Pro 70.4 60 0.0013 32.5 11.8 100 254-354 19-121 (552)
146 PRK06187 long-chain-fatty-acid 69.5 58 0.0013 32.1 11.4 86 276-362 32-119 (521)
147 PRK08316 acyl-CoA synthetase; 67.9 67 0.0014 31.7 11.5 87 274-361 35-123 (523)
148 PRK07788 acyl-CoA synthetase; 67.1 48 0.001 33.2 10.3 85 275-360 74-160 (549)
149 PRK08315 AMP-binding domain pr 67.0 53 0.0011 32.9 10.6 81 274-355 42-124 (559)
150 PRK03584 acetoacetyl-CoA synth 67.0 76 0.0016 32.7 11.9 97 254-355 97-195 (655)
151 COG2236 Predicted phosphoribos 65.9 12 0.00026 31.9 4.8 33 112-144 4-36 (192)
152 PLN03052 acetate--CoA ligase; 65.3 88 0.0019 32.9 12.0 101 254-356 188-290 (728)
153 PRK07059 Long-chain-fatty-acid 65.3 68 0.0015 32.2 11.0 97 254-360 36-134 (557)
154 PRK08279 long-chain-acyl-CoA s 65.2 75 0.0016 32.3 11.4 99 254-362 50-150 (600)
155 PLN02246 4-coumarate--CoA liga 65.1 77 0.0017 31.6 11.3 99 254-360 36-136 (537)
156 PRK00174 acetyl-CoA synthetase 64.8 85 0.0018 32.2 11.8 98 254-355 80-179 (637)
157 PLN02736 long-chain acyl-CoA s 64.4 1.3E+02 0.0027 31.1 12.9 88 274-362 77-166 (651)
158 KOG1176|consensus 64.2 76 0.0016 32.0 10.7 90 273-363 43-136 (537)
159 PRK05605 long-chain-fatty-acid 64.1 71 0.0015 32.2 10.9 97 254-360 45-143 (573)
160 PRK12583 acyl-CoA synthetase; 63.7 1.2E+02 0.0025 30.4 12.4 97 96-195 199-300 (558)
161 PRK03640 O-succinylbenzoic aci 63.6 1.1E+02 0.0023 29.9 11.9 96 254-359 15-112 (483)
162 PRK06155 crotonobetaine/carnit 63.5 63 0.0014 32.4 10.3 87 274-361 45-133 (542)
163 PRK08008 caiC putative crotono 63.4 94 0.002 30.7 11.5 102 254-360 20-123 (517)
164 PLN02574 4-coumarate--CoA liga 63.3 78 0.0017 31.9 11.0 100 254-361 52-154 (560)
165 KOG1177|consensus 62.7 1.6E+02 0.0035 29.1 11.9 104 95-202 231-339 (596)
166 TIGR02188 Ac_CoA_lig_AcsA acet 62.7 1E+02 0.0022 31.5 11.9 99 254-356 70-170 (625)
167 PTZ00237 acetyl-CoA synthetase 62.5 1.2E+02 0.0025 31.4 12.2 96 255-354 75-172 (647)
168 PRK07514 malonyl-CoA synthase; 62.4 1E+02 0.0022 30.3 11.5 88 273-361 26-115 (504)
169 PRK06839 acyl-CoA synthetase; 62.2 1.3E+02 0.0027 29.5 12.1 98 254-361 15-115 (496)
170 PRK12476 putative fatty-acid-- 61.7 1.3E+02 0.0029 30.6 12.5 103 254-361 47-157 (612)
171 PRK13388 acyl-CoA synthetase; 61.6 95 0.0021 31.1 11.2 96 255-360 15-113 (540)
172 TIGR02316 propion_prpE propion 61.4 1.2E+02 0.0026 31.1 12.1 97 254-354 65-163 (628)
173 PLN02654 acetate-CoA ligase 60.2 1.1E+02 0.0024 31.7 11.7 99 254-356 102-202 (666)
174 PRK10524 prpE propionyl-CoA sy 60.1 1.2E+02 0.0027 31.0 11.9 98 254-355 66-165 (629)
175 PLN02620 indole-3-acetic acid- 60.0 10 0.00022 38.5 3.7 54 230-283 73-129 (612)
176 PRK07798 acyl-CoA synthetase; 59.9 1.2E+02 0.0027 29.8 11.7 98 255-362 17-116 (533)
177 PRK07529 AMP-binding domain pr 59.2 94 0.002 31.9 10.9 97 254-353 38-136 (632)
178 PRK09088 acyl-CoA synthetase; 58.8 1.2E+02 0.0026 29.6 11.3 95 254-356 8-104 (488)
179 TIGR03098 ligase_PEP_1 acyl-Co 58.8 70 0.0015 31.6 9.7 86 275-361 25-112 (515)
180 TIGR01733 AA-adenyl-dom amino 58.7 59 0.0013 30.8 8.9 63 297-360 22-86 (408)
181 TIGR03208 cyc_hxne_CoA_lg cycl 58.4 1E+02 0.0022 30.7 10.8 99 254-356 35-135 (538)
182 PRK04319 acetyl-CoA synthetase 58.1 92 0.002 31.4 10.5 86 274-360 72-159 (570)
183 PRK13383 acyl-CoA synthetase; 57.9 88 0.0019 31.0 10.2 86 275-361 60-147 (516)
184 PRK08314 long-chain-fatty-acid 56.9 74 0.0016 31.7 9.5 87 275-362 35-124 (546)
185 TIGR01217 ac_ac_CoA_syn acetoa 56.7 1.5E+02 0.0032 30.7 11.8 96 255-355 98-195 (652)
186 PRK05857 acyl-CoA synthetase; 56.6 1E+02 0.0022 30.9 10.4 95 254-356 27-123 (540)
187 PRK06334 long chain fatty acid 56.3 1.4E+02 0.003 30.0 11.3 83 275-361 45-129 (539)
188 COG0399 WecE Predicted pyridox 55.9 58 0.0013 31.1 7.8 90 84-193 34-129 (374)
189 COG0318 CaiC Acyl-CoA syntheta 55.8 1.5E+02 0.0032 29.7 11.5 94 254-355 24-119 (534)
190 PLN03051 acyl-activating enzym 55.8 1E+02 0.0022 30.5 10.1 96 97-195 118-217 (499)
191 PRK07470 acyl-CoA synthetase; 55.4 1.4E+02 0.0029 29.7 11.1 86 274-360 31-118 (528)
192 PRK08276 long-chain-fatty-acid 55.4 1.1E+02 0.0024 30.0 10.4 87 274-361 10-98 (502)
193 TIGR03443 alpha_am_amid L-amin 55.4 87 0.0019 35.7 10.7 100 254-354 249-350 (1389)
194 PLN02330 4-coumarate--CoA liga 55.1 1E+02 0.0022 30.8 10.2 99 254-360 41-141 (546)
195 PRK14057 epimerase; Provisiona 54.3 1.3E+02 0.0029 26.9 9.4 66 127-195 90-165 (254)
196 PLN02565 cysteine synthase 54.0 1.3E+02 0.0029 28.0 10.0 79 115-195 43-122 (322)
197 PRK05677 long-chain-fatty-acid 53.7 1.4E+02 0.0031 30.0 11.0 96 254-359 37-135 (562)
198 PLN02479 acetate-CoA ligase 53.3 1.8E+02 0.0039 29.3 11.7 97 254-360 33-131 (567)
199 PRK13391 acyl-CoA synthetase; 52.4 2E+02 0.0044 28.4 11.7 99 254-360 10-110 (511)
200 PF01041 DegT_DnrJ_EryC1: DegT 52.2 37 0.00081 32.1 6.2 92 83-194 24-121 (363)
201 PRK06087 short chain acyl-CoA 51.4 1.2E+02 0.0026 30.2 10.1 92 254-354 36-129 (547)
202 cd07050 BMC_EutL_repeat2 ethan 51.1 32 0.0007 24.5 3.9 42 128-169 3-45 (87)
203 PRK05850 acyl-CoA synthetase; 50.8 2.5E+02 0.0054 28.3 12.3 104 254-361 14-124 (578)
204 TIGR02379 ECA_wecE TDP-4-keto- 50.3 61 0.0013 30.9 7.3 64 127-194 59-127 (376)
205 PRK06164 acyl-CoA synthetase; 50.1 1.2E+02 0.0026 30.2 9.8 93 254-356 23-117 (540)
206 PRK08751 putative long-chain f 49.1 2.1E+02 0.0046 28.6 11.4 97 254-360 38-137 (560)
207 PRK11706 TDP-4-oxo-6-deoxy-D-g 49.1 70 0.0015 30.4 7.5 60 130-193 62-126 (375)
208 PRK08162 acyl-CoA synthetase; 48.7 1.4E+02 0.003 29.8 9.9 87 274-361 42-130 (545)
209 TIGR02262 benz_CoA_lig benzoat 48.1 2.4E+02 0.0052 27.8 11.5 97 254-361 18-117 (508)
210 PRK13390 acyl-CoA synthetase; 48.0 2.7E+02 0.0059 27.3 11.8 95 254-356 10-106 (501)
211 PRK14807 histidinol-phosphate 48.0 1.3E+02 0.0029 28.1 9.2 55 136-193 97-155 (351)
212 PLN02556 cysteine synthase/L-3 47.0 1.7E+02 0.0036 27.9 9.6 62 133-194 103-165 (368)
213 PRK08091 ribulose-phosphate 3- 46.7 2E+02 0.0043 25.4 9.2 67 126-195 82-151 (228)
214 COG1223 Predicted ATPase (AAA+ 46.3 50 0.0011 29.8 5.4 69 82-153 196-267 (368)
215 PLN02614 long-chain acyl-CoA s 46.1 1.7E+02 0.0038 30.3 10.4 87 274-361 78-166 (666)
216 PLN02861 long-chain-fatty-acid 45.8 2.1E+02 0.0046 29.5 11.0 87 274-361 76-164 (660)
217 PRK13382 acyl-CoA synthetase; 45.7 1.9E+02 0.0042 28.8 10.5 97 254-360 56-154 (537)
218 PRK12582 acyl-CoA synthetase; 45.7 1.9E+02 0.004 29.7 10.5 97 254-354 62-165 (624)
219 PRK05852 acyl-CoA synthetase; 45.7 1.9E+02 0.004 28.8 10.3 91 254-352 29-121 (534)
220 PRK05620 long-chain-fatty-acid 45.7 3E+02 0.0066 27.7 12.0 101 254-361 23-126 (576)
221 cd01445 TST_Repeats Thiosulfat 45.0 76 0.0016 25.4 6.0 41 125-165 81-124 (138)
222 PRK12492 long-chain-fatty-acid 44.9 1.9E+02 0.0042 29.0 10.4 85 274-359 48-135 (562)
223 PRK07867 acyl-CoA synthetase; 44.4 1.8E+02 0.0039 29.0 10.0 86 274-360 27-115 (529)
224 PRK06188 acyl-CoA synthetase; 43.7 2.7E+02 0.0059 27.5 11.2 81 274-355 36-118 (524)
225 PRK06178 acyl-CoA synthetase; 43.5 1.9E+02 0.004 29.1 10.0 86 275-361 58-145 (567)
226 PRK07008 long-chain-fatty-acid 43.4 3.3E+02 0.0071 27.1 11.7 86 274-360 38-125 (539)
227 TIGR01139 cysK cysteine syntha 43.3 2.4E+02 0.0052 25.8 9.9 67 128-195 45-112 (298)
228 PLN03013 cysteine synthase 43.2 2.2E+02 0.0048 27.8 9.8 79 115-195 151-230 (429)
229 PLN02387 long-chain-fatty-acid 43.2 1.8E+02 0.004 30.3 10.1 88 274-362 105-194 (696)
230 PRK11761 cysM cysteine synthas 43.1 2.3E+02 0.005 26.0 9.7 77 115-194 40-117 (296)
231 PRK08043 bifunctional acyl-[ac 41.9 3.2E+02 0.0069 28.6 11.7 96 96-194 363-463 (718)
232 TIGR01136 cysKM cysteine synth 40.7 2.7E+02 0.0059 25.4 9.8 68 127-195 45-113 (299)
233 cd01519 RHOD_HSP67B2 Member of 40.6 1.1E+02 0.0024 22.5 6.1 53 113-165 36-92 (106)
234 PRK06018 putative acyl-CoA syn 40.0 1.8E+02 0.004 28.9 9.3 88 273-361 37-126 (542)
235 PRK10696 tRNA 2-thiocytidine b 39.8 2.8E+02 0.006 24.8 9.8 71 124-194 13-95 (258)
236 PRK07786 long-chain-fatty-acid 39.7 2.1E+02 0.0046 28.5 9.7 85 275-360 42-128 (542)
237 COG1167 ARO8 Transcriptional r 39.7 1.8E+02 0.004 28.6 8.9 57 297-357 176-237 (459)
238 TIGR01923 menE O-succinylbenzo 39.4 1.8E+02 0.004 27.7 9.0 58 297-355 21-80 (436)
239 KOG0633|consensus 38.6 39 0.00084 30.3 3.5 100 78-195 67-169 (375)
240 TIGR03588 PseC UDP-4-keto-6-de 38.5 1.8E+02 0.0038 27.6 8.5 66 125-193 55-128 (380)
241 PLN02860 o-succinylbenzoate-Co 38.3 1.7E+02 0.0036 29.5 8.7 80 275-355 32-113 (563)
242 PRK08633 2-acyl-glycerophospho 37.4 3E+02 0.0065 30.5 11.2 98 254-361 628-727 (1146)
243 TIGR01734 D-ala-DACP-lig D-ala 36.8 1.9E+02 0.0042 28.3 8.8 82 274-356 24-107 (502)
244 PRK04813 D-alanine--poly(phosp 36.7 1.8E+02 0.004 28.4 8.6 79 275-354 27-107 (503)
245 PRK15407 lipopolysaccharide bi 36.5 1.3E+02 0.0029 29.4 7.3 56 134-193 106-166 (438)
246 KOG0331|consensus 36.5 2.5E+02 0.0054 28.1 9.0 73 122-194 324-399 (519)
247 PRK08974 long-chain-fatty-acid 36.0 3.1E+02 0.0068 27.4 10.3 96 254-359 36-134 (560)
248 PRK09162 hypoxanthine-guanine 36.0 1.1E+02 0.0024 25.8 5.9 48 113-161 15-62 (181)
249 PLN00011 cysteine synthase 35.8 3.5E+02 0.0077 25.1 9.8 71 124-195 52-124 (323)
250 PLN00175 aminotransferase fami 35.6 4.1E+02 0.0089 25.6 11.9 24 266-289 262-285 (413)
251 PTZ00342 acyl-CoA synthetase; 35.5 5.3E+02 0.011 27.3 12.0 104 254-363 74-194 (746)
252 PLN02430 long-chain-fatty-acid 35.5 3.1E+02 0.0067 28.4 10.3 102 255-359 56-161 (660)
253 PRK08180 feruloyl-CoA synthase 35.4 4E+02 0.0087 27.1 11.1 96 254-354 52-154 (614)
254 PRK12406 long-chain-fatty-acid 35.4 2.9E+02 0.0064 27.1 9.8 86 275-361 11-98 (509)
255 PRK07638 acyl-CoA synthetase; 35.1 2.5E+02 0.0055 27.4 9.3 80 112-195 160-240 (487)
256 PRK06710 long-chain-fatty-acid 35.0 2.2E+02 0.0047 28.6 8.9 84 274-358 48-133 (563)
257 PRK11658 UDP-4-amino-4-deoxy-L 34.8 1.7E+02 0.0038 27.8 7.8 62 126-191 60-126 (379)
258 COG0036 Rpe Pentose-5-phosphat 34.5 2E+02 0.0043 25.2 7.1 56 140-195 86-142 (220)
259 cd01449 TST_Repeat_2 Thiosulfa 34.4 1E+02 0.0022 23.4 5.1 39 126-164 65-103 (118)
260 PRK07769 long-chain-fatty-acid 33.7 5.3E+02 0.012 26.3 13.0 103 254-360 34-143 (631)
261 PRK07868 acyl-CoA synthetase; 33.5 4.4E+02 0.0096 29.0 11.4 96 254-360 460-555 (994)
262 cd06448 L-Ser-dehyd Serine deh 33.4 3.6E+02 0.0077 25.0 9.4 64 131-195 43-106 (316)
263 TIGR02275 DHB_AMP_lig 2,3-dihy 33.3 3.4E+02 0.0075 26.8 10.0 92 254-355 36-129 (527)
264 PRK09029 O-succinylbenzoic aci 32.6 2.7E+02 0.0058 27.0 8.9 92 254-355 16-109 (458)
265 PRK09192 acyl-CoA synthetase; 31.7 4.3E+02 0.0093 26.6 10.5 88 273-361 47-143 (579)
266 TIGR01137 cysta_beta cystathio 31.6 3.8E+02 0.0082 26.2 9.8 68 127-195 49-117 (454)
267 TIGR03205 pimA dicarboxylate-- 31.5 2.5E+02 0.0055 27.9 8.7 79 275-354 46-126 (541)
268 PTZ00216 acyl-CoA synthetase; 31.0 4.5E+02 0.0098 27.4 10.7 89 272-362 118-209 (700)
269 PF02073 Peptidase_M29: Thermo 29.8 1.4E+02 0.003 28.9 6.1 50 120-169 3-56 (398)
270 COG0031 CysK Cysteine synthase 29.5 4.6E+02 0.0099 24.2 9.5 63 132-195 54-117 (300)
271 cd00640 Trp-synth-beta_II Tryp 29.4 3.9E+02 0.0084 23.4 9.9 69 126-195 37-105 (244)
272 PRK06060 acyl-CoA synthetase; 29.4 3.7E+02 0.0081 27.9 9.8 94 254-358 19-114 (705)
273 PLN02723 3-mercaptopyruvate su 29.2 1.3E+02 0.0028 28.0 5.7 55 113-167 237-297 (320)
274 PF09269 DUF1967: Domain of un 28.2 60 0.0013 22.5 2.5 30 115-144 33-62 (69)
275 PRK03317 histidinol-phosphate 28.1 4.9E+02 0.011 24.4 9.7 21 266-286 231-251 (368)
276 TIGR03595 Obg_CgtA_exten Obg f 28.1 69 0.0015 22.2 2.8 23 123-145 41-63 (69)
277 PRK02731 histidinol-phosphate 27.7 5.1E+02 0.011 24.2 12.9 22 266-287 228-249 (367)
278 PLN02238 hypoxanthine phosphor 27.7 1.5E+02 0.0032 25.2 5.3 45 113-158 10-54 (189)
279 COG2885 OmpA Outer membrane pr 27.6 2.4E+02 0.0052 23.8 6.7 62 82-144 98-159 (190)
280 PRK09177 xanthine-guanine phos 27.0 1.2E+02 0.0025 25.0 4.4 45 113-160 8-52 (156)
281 COG0365 Acs Acyl-coenzyme A sy 26.9 5.7E+02 0.012 25.8 10.0 99 257-360 25-126 (528)
282 PRK08308 acyl-CoA synthetase; 26.9 5.5E+02 0.012 24.4 12.1 96 96-195 99-199 (414)
283 TIGR02304 aden_form_hyp probab 26.7 6.1E+02 0.013 24.8 11.4 101 114-219 118-224 (430)
284 TIGR00936 ahcY adenosylhomocys 26.5 6E+02 0.013 24.6 10.3 57 139-195 32-90 (406)
285 COG1916 Uncharacterized homolo 26.5 1.7E+02 0.0036 27.7 5.6 82 83-174 25-123 (388)
286 PF00156 Pribosyltran: Phospho 26.2 1.8E+02 0.0039 22.1 5.3 28 113-140 3-30 (125)
287 PRK10595 SOS cell division inh 25.9 3.3E+02 0.0073 22.6 6.8 66 128-193 70-141 (164)
288 cd06451 AGAT_like Alanine-glyo 25.8 4E+02 0.0086 24.8 8.5 17 269-285 189-207 (356)
289 TIGR00715 precor6x_red precorr 25.8 3.9E+02 0.0085 24.0 7.9 38 158-195 166-206 (256)
290 PLN02409 serine--glyoxylate am 25.1 4.4E+02 0.0094 25.3 8.7 33 160-192 81-113 (401)
291 COG1611 Predicted Rossmann fol 24.9 3.6E+02 0.0078 23.3 7.2 71 97-177 14-84 (205)
292 TIGR01138 cysM cysteine syntha 24.6 5.4E+02 0.012 23.4 9.8 66 129-195 48-114 (290)
293 PRK11493 sseA 3-mercaptopyruva 24.6 1.5E+02 0.0033 26.9 5.2 53 113-165 200-257 (281)
294 PRK06702 O-acetylhomoserine am 24.4 3.7E+02 0.0079 26.3 8.0 57 136-194 97-155 (432)
295 PLN02356 phosphateglycerate ki 24.4 6.5E+02 0.014 24.6 9.5 71 123-194 87-158 (423)
296 TIGR01203 HGPRTase hypoxanthin 24.3 2.1E+02 0.0045 23.7 5.5 20 115-134 3-22 (166)
297 COG1022 FAA1 Long-chain acyl-C 24.2 7E+02 0.015 25.7 10.1 98 94-195 187-288 (613)
298 TIGR01279 DPOR_bchN light-inde 24.1 5.6E+02 0.012 24.7 9.2 57 138-195 273-330 (407)
299 PRK10252 entF enterobactin syn 23.7 3.7E+02 0.008 30.4 9.0 85 275-360 483-569 (1296)
300 PRK07787 acyl-CoA synthetase; 23.4 4.9E+02 0.011 25.3 8.9 73 275-354 25-100 (471)
301 cd00615 Orn_deC_like Ornithine 23.3 3.7E+02 0.0081 24.3 7.6 56 136-194 96-162 (294)
302 PRK04870 histidinol-phosphate 23.2 3.9E+02 0.0084 24.9 7.9 72 261-354 84-162 (356)
303 PTZ00297 pantothenate kinase; 23.2 6.5E+02 0.014 29.1 10.5 87 274-362 456-543 (1452)
304 PLN03026 histidinol-phosphate 23.0 4.3E+02 0.0094 25.0 8.2 23 265-287 242-264 (380)
305 PRK05939 hypothetical protein; 22.8 6.9E+02 0.015 24.0 9.8 57 136-194 83-139 (397)
306 PRK05205 bifunctional pyrimidi 22.6 2.3E+02 0.0049 23.7 5.5 44 113-158 5-50 (176)
307 PRK07476 eutB threonine dehydr 22.5 5E+02 0.011 24.0 8.3 52 144-195 71-122 (322)
308 PRK10946 entE enterobactin syn 22.2 7.8E+02 0.017 24.4 10.6 96 96-195 180-281 (536)
309 TIGR02080 O_succ_thio_ly O-suc 22.2 4.2E+02 0.0091 25.3 7.9 58 136-194 87-144 (382)
310 PRK10802 peptidoglycan-associa 22.1 2.6E+02 0.0056 23.4 5.7 59 84-142 86-144 (173)
311 cd01019 ZnuA Zinc binding prot 22.1 5.9E+02 0.013 23.1 8.5 81 116-196 155-238 (286)
312 COG2967 ApaG Uncharacterized p 22.1 59 0.0013 25.2 1.6 24 260-283 80-104 (126)
313 PRK13237 tyrosine phenol-lyase 21.9 7.8E+02 0.017 24.3 9.8 49 133-186 111-174 (460)
314 PF07538 ChW: Clostridial hydr 21.9 62 0.0013 19.2 1.3 12 264-275 16-27 (36)
315 PRK06381 threonine synthase; V 21.8 3.1E+02 0.0067 25.4 6.8 67 125-195 52-118 (319)
316 PF00464 SHMT: Serine hydroxym 21.7 7.4E+02 0.016 24.0 12.4 60 136-195 107-178 (399)
317 COG0796 MurI Glutamate racemas 21.7 6.1E+02 0.013 23.0 10.0 82 87-172 19-100 (269)
318 PF06277 EutA: Ethanolamine ut 21.4 6.8E+02 0.015 24.8 8.9 67 83-155 353-424 (473)
319 PRK00865 glutamate racemase; P 21.4 5.9E+02 0.013 22.8 9.6 61 87-151 19-79 (261)
320 PRK08175 aminotransferase; Val 21.4 7.1E+02 0.015 23.6 11.4 24 267-290 241-264 (395)
321 PRK05851 long-chain-fatty-acid 21.3 8E+02 0.017 24.2 10.5 94 96-192 150-251 (525)
322 PRK15423 hypoxanthine phosphor 21.3 2.3E+02 0.0049 23.9 5.2 46 113-158 7-53 (178)
323 COG1064 AdhP Zn-dependent alco 21.3 2.2E+02 0.0048 26.8 5.5 61 130-194 158-218 (339)
324 cd01561 CBS_like CBS_like: Thi 21.1 6.2E+02 0.014 22.9 9.8 65 130-195 43-108 (291)
325 KOG1179|consensus 20.9 4.5E+02 0.0096 26.8 7.6 75 113-192 260-337 (649)
326 PF01053 Cys_Met_Meta_PP: Cys/ 20.7 6.2E+02 0.013 24.3 8.6 141 143-293 73-235 (386)
327 KOG2631|consensus 20.5 2.1E+02 0.0046 24.7 4.7 52 83-139 167-228 (238)
328 COG0079 HisC Histidinol-phosph 20.5 7.3E+02 0.016 23.5 9.1 130 136-293 96-242 (356)
329 PTZ00271 hypoxanthine-guanine 20.4 2.3E+02 0.005 24.6 5.1 48 113-160 26-78 (211)
330 PRK06145 acyl-CoA synthetase; 20.4 6.5E+02 0.014 24.5 9.2 81 275-356 27-109 (497)
No 1
>KOG1256|consensus
Probab=100.00 E-value=5e-52 Score=400.87 Aligned_cols=319 Identities=44% Similarity=0.772 Sum_probs=285.5
Q ss_pred CCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeec--CCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCC
Q psy2417 72 GKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQN--ISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNC 149 (391)
Q Consensus 72 ~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~--~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s 149 (391)
.+....+.+...|+++.|++.+..+|+.++++++.. ..++|+|+||+|+.+++..++.+|+.+|+++++.|||++.|+
T Consensus 64 ~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~ 143 (691)
T KOG1256|consen 64 EELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNR 143 (691)
T ss_pred CCCCCCCCCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCC
Confidence 444455667889999999999999999999999874 357799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc----CccEEEEecCcchHHHHH
Q psy2417 150 PEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR----CLKKIISIREVRMATMQR 225 (391)
Q Consensus 150 ~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~----~l~~ii~~~~~~~~~~~~ 225 (391)
+||+++.+||..+|++.||||.+++++.+.+|++++++.++|++.+.+...+++.... .++.+|.++...+.....
T Consensus 144 pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~ 223 (691)
T KOG1256|consen 144 PEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEK 223 (691)
T ss_pred hhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhh
Confidence 9999999999999999999999999999999999999999999988778888876553 689999999999888888
Q ss_pred HhhCCceEEeHHHHHHhhhccCCCC-CCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhc---CCCCCCCC
Q psy2417 226 ARSRAIEIIRFDEIERVGAQKMFEE-VPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLS---DHRPKYSD 301 (391)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~---~~~~~~~d 301 (391)
....++.+++|+++++.|......+ .++.|+|+|.|+|||||||+|||||+||+|+++.+........ ......+|
T Consensus 224 ~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~d 303 (691)
T KOG1256|consen 224 AENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDD 303 (691)
T ss_pred hhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCc
Confidence 8888999999999999998766555 5889999999999999999999999999999997654332221 11234479
Q ss_pred EEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchh-HHHHHHHH
Q psy2417 302 VLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSF-IKRLMFNM 380 (391)
Q Consensus 302 ~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~s-lr~~~~gg 380 (391)
++++++||+|++++......+..|++++|.++|+..+.+++++.+||++.+||++|+++++.+.+..+.++ +|+.++..
T Consensus 304 v~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~ 383 (691)
T KOG1256|consen 304 VYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNF 383 (691)
T ss_pred eEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 99999999999999999888899999999999999999999999999999999999999999888777665 99999999
Q ss_pred HHHHHH-Hhhh
Q psy2417 381 AMGSKE-NEIK 390 (391)
Q Consensus 381 a~~~k~-~~~~ 390 (391)
|+.+|. .+++
T Consensus 384 A~~~k~~~~~~ 394 (691)
T KOG1256|consen 384 AMAYKLEHRLM 394 (691)
T ss_pred HHHHHHHHHhh
Confidence 999999 5443
No 2
>KOG1180|consensus
Probab=100.00 E-value=5e-46 Score=344.88 Aligned_cols=326 Identities=33% Similarity=0.573 Sum_probs=281.6
Q ss_pred CccCcccccCC-CCCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeecC--------C---------CCceEEeHHHHH
Q psy2417 60 VRVSKFFSGAS-EGKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQNI--------S---------RPYQWIHYNQAL 121 (391)
Q Consensus 60 ~~~~~~~~~~~-~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~--------~---------~~~~~~Ty~el~ 121 (391)
..++..+|++. .+++...+.+...|++++|++.++++.++.++++++-. + ++|.|+||.|+.
T Consensus 17 ~~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~ 96 (678)
T KOG1180|consen 17 EHETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVY 96 (678)
T ss_pred CCCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHH
Confidence 35566678775 56688888899999999999999999999999987531 1 579999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCe-EEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhH
Q psy2417 122 LRARNFGSGLLGLGVNPGSF-VGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQ 200 (391)
Q Consensus 122 ~~~~~la~~L~~~gv~~g~~-V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~ 200 (391)
+++.++|++|.+.|++|+++ |+|+++.+.+|+++++||++.+..+|.++.+++.+.+.+-|++++++.+||+.+. +..
T Consensus 97 ~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~L-L~k 175 (678)
T KOG1180|consen 97 ERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSEL-LPK 175 (678)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHH-HHH
Confidence 99999999999999998765 9999999999999999999999999999999999999999999999999999963 455
Q ss_pred HHhhccc--CccEEEEecCcch----HHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEE
Q psy2417 201 IIDRAPR--CLKKIISIREVRM----ATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGV 274 (391)
Q Consensus 201 ~~~~~~~--~l~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV 274 (391)
+...+.. .++.||.+++.+. .........++.++++++++..++....++.++.++|+|.|||||||||.||||
T Consensus 176 l~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGV 255 (678)
T KOG1180|consen 176 LKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGV 255 (678)
T ss_pred HHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceE
Confidence 5544333 8999999995332 222222345789999999999999987777788999999999999999999999
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHH-----------HHH
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTE-----------DMK 343 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~-----------~i~ 343 (391)
+++|+|+++.+......... +++.|+++.++||+|++++...+.+++.|+++...+. .+|.+ ++.
T Consensus 256 ml~H~NiVA~~~G~~~~v~~--lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~--~TLtdts~ki~kg~kGD~~ 331 (678)
T KOG1180|consen 256 MLTHSNIVAGVTGVGENVPE--LGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSP--LTLTDTSSKIKKGCKGDLT 331 (678)
T ss_pred EEecccHHhhhhhhcccCcc--cCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCc--ceecccchhhccCCcCccc
Confidence 99999999999888877642 8999999999999999999999999999999998643 22222 577
Q ss_pred hcCCcEEecChHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHhhh
Q psy2417 344 TLKPTIMPAVPRLLNRMYDKVMAQIR-PSFIKRLMFNMAMGSKENEIK 390 (391)
Q Consensus 344 ~~~~t~~~~~P~~l~~l~~~~~~~~~-~~slr~~~~gga~~~k~~~~~ 390 (391)
..+||+|.+||++|.++.+.+..+.+ .+.++.-+|..+|.+|..+++
T Consensus 332 ~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~ 379 (678)
T KOG1180|consen 332 ELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIE 379 (678)
T ss_pred cccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999998777664 679999999999999998876
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.8e-43 Score=357.66 Aligned_cols=324 Identities=32% Similarity=0.604 Sum_probs=245.6
Q ss_pred CccCcccccCCC-CCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeec---CCCCceEEeHHHHHHHHHHHHHHHHhCC
Q psy2417 60 VRVSKFFSGASE-GKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQN---ISRPYQWIHYNQALLRARNFGSGLLGLG 135 (391)
Q Consensus 60 ~~~~~~~~~~~~-~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~---~~~~~~~~Ty~el~~~~~~la~~L~~~g 135 (391)
+.+++.+|+... ..+ ..+.+...|+.++|+++++++||++|+.+.+. ..+.++++||+||+++++++|++|+++|
T Consensus 22 ~~~~~~~~~~~~~~~~-~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~G 100 (666)
T PLN02614 22 PSVGPVYRSIFAKDGF-PNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVG 100 (666)
T ss_pred CCCCCcccCccccccc-CCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcC
Confidence 444555554322 222 12344566999999999999999999986431 1134678999999999999999999999
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc---CccEE
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR---CLKKI 212 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~---~l~~i 212 (391)
+++|++|+|+++|++||++++|||+++|+++||+++.++.+++.+++++++++++|++.+. ...+....+. .++.+
T Consensus 101 v~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~-~~~~~~~~~~~~~~l~~v 179 (666)
T PLN02614 101 VKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKK-ISELFKTCPNSTEYMKTV 179 (666)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHH-HHHHHHhcccccccceEE
Confidence 9999999999999999999999999999999999999999999999999999999998742 3344333321 36677
Q ss_pred EEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhh
Q psy2417 213 ISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQL 292 (391)
Q Consensus 213 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 292 (391)
+.++.............++.+.+++++...+...........++|+++|+|||||||.||||++||+|+++.+......+
T Consensus 180 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~ 259 (666)
T PLN02614 180 VSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLL 259 (666)
T ss_pred EEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhc
Confidence 77764322111111122445678888776543221112234679999999999999999999999999998877655543
Q ss_pred cC--CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcC-
Q psy2417 293 SD--HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIR- 369 (391)
Q Consensus 293 ~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~- 369 (391)
.. ..+.++|++++++|++|++++...+..++.|+++++.+.++..+++.|++++||+++++|++|+++++.......
T Consensus 260 ~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~ 339 (666)
T PLN02614 260 KSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSD 339 (666)
T ss_pred cccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhc
Confidence 10 016789999999999999999766777899999999877999999999999999999999999999876443322
Q ss_pred chhHHHHHHHHHHHHH
Q psy2417 370 PSFIKRLMFNMAMGSK 385 (391)
Q Consensus 370 ~~slr~~~~gga~~~k 385 (391)
.+.++..++..+...|
T Consensus 340 ~~~~~~~~~~~a~~~~ 355 (666)
T PLN02614 340 GGFLKKFVFDSAFSYK 355 (666)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 2245555666555544
No 4
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-42 Score=354.63 Aligned_cols=326 Identities=35% Similarity=0.611 Sum_probs=251.8
Q ss_pred CccCcccccCCC-CCcceeccCCCCCHHHHHHHHHHhcCCCceEEEee---cCCCCceEEeHHHHHHHHHHHHHHHHhCC
Q psy2417 60 VRVSKFFSGASE-GKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQ---NISRPYQWIHYNQALLRARNFGSGLLGLG 135 (391)
Q Consensus 60 ~~~~~~~~~~~~-~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~---~~~~~~~~~Ty~el~~~~~~la~~L~~~g 135 (391)
+.+++.||+... +.+... .+...|++++|++.++++|+++|+.+.. ...++++++||+||.++++++|++|.++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~G 98 (660)
T PLN02861 20 PSAGPVYRSIYAKDGLLDL-PADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRG 98 (660)
T ss_pred CCCCCcccccccccccccC-CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcC
Confidence 555666665432 223222 3456799999999999999999998642 11245678999999999999999999999
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcc---cCccEE
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAP---RCLKKI 212 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~---~~l~~i 212 (391)
+++|++|+|+++|++||++++|||+++|+++||+++.++.+++.+++++++++++|++... ...+..... ..++.+
T Consensus 99 v~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~-~~~~~~~~~~~~~~l~~i 177 (660)
T PLN02861 99 VNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESK-ISSILSCLPKCSSNLKTI 177 (660)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHH-HHHHHHhhhhCCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999997642 333333222 246778
Q ss_pred EEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhh
Q psy2417 213 ISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQL 292 (391)
Q Consensus 213 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 292 (391)
+.++.............+....+|+++...+... ....+..++|+++|+|||||||.||||++||+|+++.+......+
T Consensus 178 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~ 256 (660)
T PLN02861 178 VSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLL 256 (660)
T ss_pred EEECCCChhhhhhhhcCCcEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhcc
Confidence 8876543221111112234567888877644321 112234689999999999999999999999999998877665543
Q ss_pred cC--CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcC-
Q psy2417 293 SD--HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIR- 369 (391)
Q Consensus 293 ~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~- 369 (391)
.. ..+.++|++++++|++|++++...+.+++.|+++++.+.++..+++.|++++||+++++|++|+.+++....+..
T Consensus 257 ~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~ 336 (660)
T PLN02861 257 KVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISS 336 (660)
T ss_pred ccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhc
Confidence 21 014678999999999999998877778999999999877999999999999999999999999999886544433
Q ss_pred chhHHHHHHHHHHHHHHHh
Q psy2417 370 PSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 370 ~~slr~~~~gga~~~k~~~ 388 (391)
...++..++..+...|..+
T Consensus 337 ~~~~~~~l~~~a~~~~~~~ 355 (660)
T PLN02861 337 GGMLRKKLFDFAYNYKLGN 355 (660)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 3366777777776655443
No 5
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.5e-42 Score=352.10 Aligned_cols=330 Identities=35% Similarity=0.620 Sum_probs=257.2
Q ss_pred CccCcccccCCCCCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeec---CCCCceEEeHHHHHHHHHHHHHHHHhCCC
Q psy2417 60 VRVSKFFSGASEGKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQN---ISRPYQWIHYNQALLRARNFGSGLLGLGV 136 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~---~~~~~~~~Ty~el~~~~~~la~~L~~~gv 136 (391)
+.+++.||+....+-.....+...|+.++|++.++++|+++|+.+... ..++++++||+|+.++++++|.+|.++|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 98 (660)
T PLN02430 19 PSVGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGA 98 (660)
T ss_pred CCCCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCC
Confidence 446666776432221122335678999999999999999999987531 12356789999999999999999999999
Q ss_pred CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcc--cCccEEEE
Q psy2417 137 NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAP--RCLKKIIS 214 (391)
Q Consensus 137 ~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~--~~l~~ii~ 214 (391)
++|++|+|+++|++||+++++||+++|+++||++++++++++.+++++++++++|++.......+..... ..++.+|.
T Consensus 99 ~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~ 178 (660)
T PLN02430 99 EPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVS 178 (660)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999987532222211111 15677888
Q ss_pred ecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC
Q psy2417 215 IREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~ 294 (391)
++.............++...+|+++...+........+..++|+++|+|||||||.||||++||+|++..+.........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~ 258 (660)
T PLN02430 179 FTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQ 258 (660)
T ss_pred ECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccc
Confidence 86543221111122345677899987766433322334568999999999999999999999999999887765433211
Q ss_pred --CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhc-Cch
Q psy2417 295 --HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQI-RPS 371 (391)
Q Consensus 295 --~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~-~~~ 371 (391)
..+.++|++++++|++|.+++...+.++..|+++++...++..+++.+++++||++.++|.+|+++++...... ..+
T Consensus 259 ~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~ 338 (660)
T PLN02430 259 FEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELN 338 (660)
T ss_pred cccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccC
Confidence 02678999999999999999987777899999999887789999999999999999999999999998755443 345
Q ss_pred hHHHHHHHHHHHHHHHhh
Q psy2417 372 FIKRLMFNMAMGSKENEI 389 (391)
Q Consensus 372 slr~~~~gga~~~k~~~~ 389 (391)
.++..++..+...|..++
T Consensus 339 ~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 339 PRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677778888877776544
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-42 Score=354.86 Aligned_cols=326 Identities=22% Similarity=0.393 Sum_probs=250.0
Q ss_pred CCccCccCcccccCCCCCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh--
Q psy2417 56 GREVVRVSKFFSGASEGKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-- 133 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-- 133 (391)
......++..||..+...- .+.....|+.++|.+.++.+|+++|+.+... +..++++||+|+.++++++|++|.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~~-g~~~~~~Ty~el~~~v~~~A~~L~~~~ 112 (746)
T PTZ00342 36 KATNENESSVYCMKDHKKK--SSLYVYKHIMKLLLEKYKLNNNKIAIVEHSC-GEPQNYITYGNFFKKVLSFSHSLNTYE 112 (746)
T ss_pred CCCCCCCCCceecCchhhc--ccccccchHHHHHHHHHhhcCCceeEeccCC-CCCceeeeHHHHHHHHHHHHHHHHHHh
Confidence 3444566667875432222 3444577999999999999999999986431 2346899999999999999999997
Q ss_pred -CCCCCC-----------CeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHH
Q psy2417 134 -LGVNPG-----------SFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQI 201 (391)
Q Consensus 134 -~gv~~g-----------~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 201 (391)
+|+++| ++|+|+++|++||+++++||+++|++.||++++++.+++.++|++++++++|++.+ ..+.+
T Consensus 113 ~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~-~~~~l 191 (746)
T PTZ00342 113 GKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLD-LVEGL 191 (746)
T ss_pred hcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHH-HHHHH
Confidence 499998 89999999999999999999999999999999999999999999999999999754 24444
Q ss_pred Hhhccc--CccEEEEecCcchH---------------------------------------------------------H
Q psy2417 202 IDRAPR--CLKKIISIREVRMA---------------------------------------------------------T 222 (391)
Q Consensus 202 ~~~~~~--~l~~ii~~~~~~~~---------------------------------------------------------~ 222 (391)
.+.... .++.+|.++..... .
T Consensus 192 ~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (746)
T PTZ00342 192 LERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDL 271 (746)
T ss_pred HHhhccCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHH
Confidence 433221 67888888752110 0
Q ss_pred HHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCE
Q psy2417 223 MQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDV 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~ 302 (391)
.......++.+..|+++...... .....+..++|+|+|+|||||||.||||++||+|+++.+......... .....|+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~-~~~~~d~ 349 (746)
T PTZ00342 272 KEKAKKLGISIILFDDMTKNKTT-NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIF-KKYNPKT 349 (746)
T ss_pred HHHhhcCCCEEEEHHHHHhhccc-CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccc-cCCCCCe
Confidence 00011123445566666543221 112234568999999999999999999999999999987665432110 0235689
Q ss_pred EEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcC-chhHHHHHHHHH
Q psy2417 303 LISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIR-PSFIKRLMFNMA 381 (391)
Q Consensus 303 ~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~-~~slr~~~~gga 381 (391)
+++++|++|++++...+.+++.|+++++.+.++..++++|++++||+++++|.+|+++++.+..+.. .+.++..++..+
T Consensus 350 ~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a 429 (746)
T PTZ00342 350 HLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKI 429 (746)
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 9999999999999877889999999999877999999999999999999999999999987554433 346777777777
Q ss_pred HHHHHH
Q psy2417 382 MGSKEN 387 (391)
Q Consensus 382 ~~~k~~ 387 (391)
+..|..
T Consensus 430 ~~~~~~ 435 (746)
T PTZ00342 430 LSLRKS 435 (746)
T ss_pred HHHHHH
Confidence 766544
No 7
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8e-42 Score=348.89 Aligned_cols=322 Identities=35% Similarity=0.600 Sum_probs=250.9
Q ss_pred cCccCcccccCCCC-Cccee--ccCCCCCHHHHHHHHHHhcCCCceEEEee---cCCCCceEEeHHHHHHHHHHHHHHHH
Q psy2417 59 VVRVSKFFSGASEG-KFLST--LYDDVKTLYDAFRKGAKESNNGRCLGWRQ---NISRPYQWIHYNQALLRARNFGSGLL 132 (391)
Q Consensus 59 ~~~~~~~~~~~~~~-~~~~~--~~~~~~tl~~~l~~~~~~~pd~~al~~~~---~~~~~~~~~Ty~el~~~~~~la~~L~ 132 (391)
.......||+...+ ++... ..+...|++++|++.++++|+++|+.+.. ...+.++++||+||+++++++|++|.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~ 96 (651)
T PLN02736 17 QTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLV 96 (651)
T ss_pred CCCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHH
Confidence 34455556654322 33222 23445799999999999999999997532 11234688999999999999999999
Q ss_pred hCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--Ccc
Q psy2417 133 GLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLK 210 (391)
Q Consensus 133 ~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~ 210 (391)
++|+++|++|+|+++|++||+++++||+++|+++||+++.++.+++.+++++++++++|++.+. ...+...... .++
T Consensus 97 ~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~ 175 (651)
T PLN02736 97 QHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQT-LNTLLSCLSEIPSVR 175 (651)
T ss_pred HhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHH-HHHHHHHhhcCCCce
Confidence 9999999999999999999999999999999999999999999999999999999999998642 3333322221 567
Q ss_pred EEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHH
Q psy2417 211 KIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALL 290 (391)
Q Consensus 211 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~ 290 (391)
.++.++.............++....|+++...+...........++|+++|+|||||||.||||++||+|+++.+.....
T Consensus 176 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~ 255 (651)
T PLN02736 176 LIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSL 255 (651)
T ss_pred EEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHh
Confidence 77776543221111112234567789888765433222233457899999999999999999999999999999888877
Q ss_pred hhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcC-
Q psy2417 291 QLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIR- 369 (391)
Q Consensus 291 ~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~- 369 (391)
.++ +.++|++++++|++|++++...+.+|+.|+++++.+.++..+++.|++++||+++++|++++.+.+.......
T Consensus 256 ~~~---~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~ 332 (651)
T PLN02736 256 STK---FYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKE 332 (651)
T ss_pred ccC---CCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhc
Confidence 776 8899999999999999999877889999999999888899999999999999999999999999887443332
Q ss_pred chhHHHHHHHHHHHH
Q psy2417 370 PSFIKRLMFNMAMGS 384 (391)
Q Consensus 370 ~~slr~~~~gga~~~ 384 (391)
.+.++..++..++..
T Consensus 333 ~~~~~~~~~~~~~~~ 347 (651)
T PLN02736 333 SGGLKERLFNAAYNA 347 (651)
T ss_pred ccHHHHHHHHHHHHH
Confidence 235555555554443
No 8
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.6e-41 Score=348.00 Aligned_cols=319 Identities=33% Similarity=0.574 Sum_probs=250.8
Q ss_pred cccCCCCCcceeccCCCCCHHHHHHHHHHhcCCCceEEEeec-----------------CCCCceEEeHHHHHHHHHHHH
Q psy2417 66 FSGASEGKFLSTLYDDVKTLYDAFRKGAKESNNGRCLGWRQN-----------------ISRPYQWIHYNQALLRARNFG 128 (391)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~-----------------~~~~~~~~Ty~el~~~~~~la 128 (391)
||+.....+...+.+...|+.++|++.++.+||++|+.++.. ..++++++||+|++++++++|
T Consensus 41 ~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA 120 (696)
T PLN02387 41 IRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFA 120 (696)
T ss_pred eecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHH
Confidence 777655455555556778999999999999999999976410 114578899999999999999
Q ss_pred HHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-
Q psy2417 129 SGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR- 207 (391)
Q Consensus 129 ~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~- 207 (391)
++|.++|+++|++|+|+++|++||+++++||+++|+++||++++++++++.++|++++++++|++.+. ...+.+....
T Consensus 121 ~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~-~~~l~~~~~~~ 199 (696)
T PLN02387 121 SGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQ-LKKLIDISSQL 199 (696)
T ss_pred HHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHH-HHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998642 4444332221
Q ss_pred -CccEEEEecCcchHHHH-HHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHH
Q psy2417 208 -CLKKIISIREVRMATMQ-RARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAI 285 (391)
Q Consensus 208 -~l~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~ 285 (391)
.++.+|.+++....... .....++.+..|+++...+......+..+.++|+++|+|||||||.||||++||+|+++.+
T Consensus 200 ~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~ 279 (696)
T PLN02387 200 ETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATV 279 (696)
T ss_pred CCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHH
Confidence 67888888764322111 0122345677899888766543323344578999999999999999999999999999988
Q ss_pred HHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC----C-----HHhHHHHHHhcCCcEEecChHH
Q psy2417 286 SAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG----D-----IKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~----~-----~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
......+.. +.++|++++++|++|++++...+..+..|+++.+... + +..+++.+++++||+++++|++
T Consensus 280 ~~~~~~~~~--~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~ 357 (696)
T PLN02387 280 AGVMTVVPK--LGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAI 357 (696)
T ss_pred HHHHhhcCC--CCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHH
Confidence 776654321 7889999999999999999888778889999887432 1 2345678999999999999999
Q ss_pred HHHHHHHHHHhc-CchhHHHHHHHHHHHHHHH
Q psy2417 357 LNRMYDKVMAQI-RPSFIKRLMFNMAMGSKEN 387 (391)
Q Consensus 357 l~~l~~~~~~~~-~~~slr~~~~gga~~~k~~ 387 (391)
++++.+...... ..+.++..++..++..|..
T Consensus 358 l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 389 (696)
T PLN02387 358 LDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLA 389 (696)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 999988754443 2346666777777666554
No 9
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.6e-41 Score=330.92 Aligned_cols=300 Identities=31% Similarity=0.522 Sum_probs=229.3
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++...+.++++.+|+.+++.+.. .+.++.+||+|+.+++.++|.+|+..|+.+||+|+|++.|+++|+++.+||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKE--LGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeec--CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 35688999999999999988888766 5778999999999999999999999999779999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecC----cch-HHHHHHhhCCceE
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIRE----VRM-ATMQRARSRAIEI 233 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~----~~~-~~~~~~~~~~~~~ 233 (391)
.+|++.||++++.+++++.++|++++++++|++.......+...... .+..++.... ... .............
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGI 171 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccc
Confidence 99999999999999999999999999999999986533333322221 0111111100 000 0000000000111
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHML 313 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 313 (391)
..+ .+... .......++.++|+|.|+|||||||.|||||+||+|+++++........ ..+++|++++++|++|++
T Consensus 172 ~~~-~~~~~--~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~ 246 (613)
T COG1022 172 SLF-LIDSA--GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIF 246 (613)
T ss_pred hhh-hhccc--ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHH
Confidence 111 11111 1111224678999999999999999999999999999999999988874 278999999999999999
Q ss_pred HHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHH
Q psy2417 314 ERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPS-FIKRLMFNMAMGSKEN 387 (391)
Q Consensus 314 g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~-slr~~~~gga~~~k~~ 387 (391)
++.+.......|+..++...++..+.+++++++||++++||++|+++.+.+.++.+.+ -.+..+|.+++..+.+
T Consensus 247 Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~ 321 (613)
T COG1022 247 ERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYK 321 (613)
T ss_pred HHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 9998643334444444445689999999999999999999999999999988777654 4566788888876643
No 10
>KOG1177|consensus
Probab=100.00 E-value=1e-41 Score=311.40 Aligned_cols=290 Identities=19% Similarity=0.271 Sum_probs=248.1
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...|+.++++-.+++-||+.|+++... ...+||+|+.+.++.+|.+|..+|+++||+|+++.||+.+|+.++|||+
T Consensus 48 ~~~Tigq~l~~~t~~v~dkea~Vf~~e----g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A 123 (596)
T KOG1177|consen 48 DSETIGQLLETTTERVPDKEAAVFDHE----GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACA 123 (596)
T ss_pred ccccHHHHHHHHhhccCcceEEEEeec----cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHH
Confidence 467999999999999999999887652 2569999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch----hHHHhhccc---------------CccEEEEecCcchH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC----NQIIDRAPR---------------CLKKIISIREVRMA 221 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~----~~~~~~~~~---------------~l~~ii~~~~~~~~ 221 (391)
++|.+.|+++|.|..+++++.|+..+++++|+....+. +.+++.+++ .+.++|..+++.+
T Consensus 124 ~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~- 202 (596)
T KOG1177|consen 124 RAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHP- 202 (596)
T ss_pred HhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCc-
Confidence 99999999999999999999999999999999876322 223333322 3556777663321
Q ss_pred HHHHHhhCCceEEeHHHHHHhhhccCCCC-----CCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCC
Q psy2417 222 TMQRARSRAIEIIRFDEIERVGAQKMFEE-----VPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHR 296 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~ 296 (391)
-.+-+.++|+...+....... ....|+|++.|.|||||||.|||+.+||.|++++........+
T Consensus 203 --------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g--- 271 (596)
T KOG1177|consen 203 --------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG--- 271 (596)
T ss_pred --------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC---
Confidence 224567777776554422111 2346899999999999999999999999999999999999988
Q ss_pred CCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHH-HHHhcCchh
Q psy2417 297 PKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK-VMAQIRPSF 372 (391)
Q Consensus 297 ~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~~s 372 (391)
++.+++++...||+|++|.... +.+|..|+|++|+.. ++.+.++.|+++++|.++.+|+++..|++. ...++++++
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~ 351 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSS 351 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhh
Confidence 8889999999999999997777 899999999999765 999999999999999999999999999987 568889999
Q ss_pred HHHHHHHHHHHHHH
Q psy2417 373 IKRLMFNMAMGSKE 386 (391)
Q Consensus 373 lr~~~~gga~~~k~ 386 (391)
+|..+.||++.+++
T Consensus 352 lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 352 LRKGVIGGAPVSPE 365 (596)
T ss_pred hhhheeCCCCCCHH
Confidence 99999999987664
No 11
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.1e-40 Score=337.59 Aligned_cols=302 Identities=28% Similarity=0.471 Sum_probs=236.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeec-----------CC----------CCceEEeHHHHHHHHHHHHHHHHhCCCCC
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQN-----------IS----------RPYQWIHYNQALLRARNFGSGLLGLGVNP 138 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~-----------~~----------~~~~~~Ty~el~~~~~~la~~L~~~gv~~ 138 (391)
+...|+.++|+++++++||++|++++.. .+ ++++++||+||.++++++|++|.++|+++
T Consensus 66 ~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~ 145 (700)
T PTZ00216 66 YYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTK 145 (700)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCC
Confidence 3567999999999999999999998631 01 24689999999999999999999999999
Q ss_pred CCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc---CccEEEEe
Q psy2417 139 GSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR---CLKKIISI 215 (391)
Q Consensus 139 g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~---~l~~ii~~ 215 (391)
|++|+|+++|++||+++++||+++|+++||+++.++++++.+++++++++++|++... ...+...... ....+|.+
T Consensus 146 gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~-~~~l~~~~~~~~~~~~~ii~~ 224 (700)
T PTZ00216 146 GSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKN-VPNLLRLMKSGGMPNTTIIYL 224 (700)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHH-HHHHHHhhhhccCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999998753 3333332221 12356666
Q ss_pred cCcchHHHHHHhhCCceEEeHHHHHHhhh--ccC-CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhh
Q psy2417 216 REVRMATMQRARSRAIEIIRFDEIERVGA--QKM-FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQL 292 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 292 (391)
+..... ....++.+.+|+++...+. ... ....+..++|+++|+|||||||.||||++||+|+++.+......+
T Consensus 225 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~ 300 (700)
T PTZ00216 225 DSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRL 300 (700)
T ss_pred CCCccc----cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhc
Confidence 543211 1123556788999877652 111 112344689999999999999999999999999999887765543
Q ss_pred cCC--CCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHH-------HHHhcCCcEEecChHHHHHHHHH
Q psy2417 293 SDH--RPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTE-------DMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 293 ~~~--~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~-------~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
... .+.++|++++++|++|++++......+..|+++++. ++..+.+ .+++++||++.++|++++++.+.
T Consensus 301 ~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~ 378 (700)
T PTZ00216 301 NDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKA 378 (700)
T ss_pred ccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC--CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHH
Confidence 210 146789999999999999987776778888888773 4555555 78999999999999999999887
Q ss_pred HHHhc-CchhHHHHHHHHHHHHHHHh
Q psy2417 364 VMAQI-RPSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 364 ~~~~~-~~~slr~~~~gga~~~k~~~ 388 (391)
..... ..+.++..++..++..|...
T Consensus 379 ~~~~~~~~~~~~~~~~~~a~~~~~~~ 404 (700)
T PTZ00216 379 VEAKLPPVGSLKRRVFDHAYQSRLRA 404 (700)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 54433 34577888888777766543
No 12
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=7.8e-39 Score=340.01 Aligned_cols=303 Identities=22% Similarity=0.340 Sum_probs=243.1
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...|+.++|++.++++|+++|+.+... .++++++||+|+.++++++|.+|.++|+++||+|+|+++|++||+++++||
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~~~-~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~ 502 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQTSE-SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVAC 502 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEecc-CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4457999999999999999999975321 234689999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcch-HHHHHHhhCCceEEeHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRM-ATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (391)
+++|+++||+++ +.+++.+++++++++++|++... ...+.+.....++.||+++.... .........++.+++|++
T Consensus 503 ~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~-l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ 579 (1452)
T PTZ00297 503 ALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNS-VAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEF 579 (1452)
T ss_pred HHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhH-HHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHH
Confidence 999999999986 46799999999999999998753 55555443337899999874211 000000112455788999
Q ss_pred HHHhhhccCC-CCCCCCCCCceEEEe---cCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 239 IERVGAQKMF-EEVPPKPTDLCTICY---TSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 239 l~~~~~~~~~-~~~~~~~~~~a~i~~---TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
+...+..... ......++|++.|+| ||||||.||||++||+|+++++.............++|++++++||+|+++
T Consensus 580 ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~e 659 (1452)
T PTZ00297 580 VEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFN 659 (1452)
T ss_pred HHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHH
Confidence 9887643221 122347889999996 999999999999999999999887655321001567899999999999999
Q ss_pred HHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHh
Q psy2417 315 RTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIR-PSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 315 ~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~-~~slr~~~~gga~~~k~~~ 388 (391)
+...+.+++.|+++++ .++..+++.|++++||++++||++|+++.+.+..+.. .+.++..++..|+..|...
T Consensus 660 r~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~ 732 (1452)
T PTZ00297 660 RVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRL 732 (1452)
T ss_pred HHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 8777888999999976 3689999999999999999999999999888655544 3578899998888877654
No 13
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=4e-40 Score=385.82 Aligned_cols=332 Identities=18% Similarity=0.207 Sum_probs=261.1
Q ss_pred hhhcchhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCcccccC------CCCCcceecc
Q psy2417 22 EIIREQNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSGA------SEGKFLSTLY 79 (391)
Q Consensus 22 ~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~~------~~~~~~~~~~ 79 (391)
-..+ |++.+...++++.++|+|++++|++.+ ..+........+.... ...+....+.
T Consensus 1492 ~~~d-L~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1570 (3956)
T PRK12467 1492 AQFD-LTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAERRQILEGWNATHTGY 1570 (3956)
T ss_pred cccc-eEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHhhhhHHhhcCCccCC
Confidence 3444 888888888899999999999999876 2222222222221100 0011112223
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...+++++|+++++++|+++|+.+.+ +.+||+||+++++++|++|.++|+++|++|+|+++|++++++++|||
T Consensus 1571 ~~~~~~~~~~~~~a~~~p~~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lav 1644 (3956)
T PRK12467 1571 PLARLVHQLIEDQAAATPEAVALVFGE------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAI 1644 (3956)
T ss_pred CccccHHHHHHHHHHhCCCCeEEEeCC------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHh
Confidence 445689999999999999999999876 78999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+++|+++||+||.+|.+++.++++++++++++++... ...+ .... .. .++.++... ++
T Consensus 1645 lkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~-~~~~-~~~~-~~-~~~~~~~~~------------------~~ 1702 (3956)
T PRK12467 1645 LKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHL-QARL-PLPD-GL-RSLVLDQED------------------DW 1702 (3956)
T ss_pred hccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhh-hhhC-cccc-CC-cEEEecccc------------------ch
Confidence 9999999999999999999999999999999998752 1111 1110 11 223333211 00
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHH
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCES 319 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 319 (391)
.. ......+.....+++++||+|||||||+||||+++|+++++.+.+....++ ++++|+++++.|++|+++++.++
T Consensus 1703 ~~-~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~---~~~~d~~l~~~~~~fd~~~~~~~ 1778 (3956)
T PRK12467 1703 LE-GYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQ---LSAADVVLQFTSFAFDVSVWELF 1778 (3956)
T ss_pred hc-cCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcC---CCcccEEEEecCccHHHHHHHHH
Confidence 00 011111223456899999999999999999999999999999998888887 89999999999999999999889
Q ss_pred HHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 320 ~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k~ 386 (391)
.+|+.|+++++.+. ++..+++.|+++++|++.++|++++.|.+......++++||.+++||+...+.
T Consensus 1779 ~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~lr~v~~gGe~l~~~ 1849 (3956)
T PRK12467 1779 WPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQVEHPLSLRRVVCGGEALEVE 1849 (3956)
T ss_pred HHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccccccCCCceEEEEccccCCHH
Confidence 99999999999764 78999999999999999999999999987533334567999999999876543
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=6.8e-39 Score=309.83 Aligned_cols=281 Identities=21% Similarity=0.224 Sum_probs=227.8
Q ss_pred HHHHHHH-hcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhcCCe
Q psy2417 88 AFRKGAK-ESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCYSMI 165 (391)
Q Consensus 88 ~l~~~~~-~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~ 165 (391)
.+++... ..+|+.|+++.+..+.. +.+||+||.++++++|..|++ .|+ +||+|+|++|+.+|.++++|||++.|++
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI 91 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAI 91 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 4555554 35789999998753333 899999999999999999987 678 9999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHHHHhcCccEEEEcCCcchh----HHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 166 IVALYDTLGPDACAFIINQAEISVLIVDDDSKCN----QIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 166 ~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~----~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
++|+.+.++++.+.+.+++++++++|+.+..... .+.....+.+..++.++.. + +.|+++..
T Consensus 92 ~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~-----------~---~~~~~~~~ 157 (528)
T COG0365 92 PAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL-----------G---LWYDEAVE 157 (528)
T ss_pred EeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc-----------c---ccHHHHhh
Confidence 9999999999999999999999999998763111 1111111011113333321 1 56666665
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHH-hhcCCCCCCCCEEEEcCChHHHHHHHHH-H
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALL-QLSDHRPKYSDVLISFLPLAHMLERTCE-S 319 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~ 319 (391)
...... .+.+...+|+++|+|||||||+||||+++|++++........ .+. +.++|++++..++.|++|.+.. +
T Consensus 158 ~~~~~~-~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~---~~~~Dv~w~~ad~GW~~g~~~~v~ 233 (528)
T COG0365 158 KASEKF-EFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGD---LLPGDRFWNSSDPGWIYGLWYSVF 233 (528)
T ss_pred ccCCCC-CccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhC---CCCCCEEEeCCCchhhhCchHHHH
Confidence 433222 334478999999999999999999999999988877766655 444 6799999999999999999997 9
Q ss_pred HHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHh
Q psy2417 320 AMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 320 ~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~k~~~ 388 (391)
++|.+|++++++++ ++..+++.|+++++|+++..|+.+++|.+.. ..+.++++||.+.+.|.+...+.+
T Consensus 234 ~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~ 307 (528)
T COG0365 234 SPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAF 307 (528)
T ss_pred HHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHH
Confidence 99999999999865 3889999999999999999999999999874 567889999999999999887764
No 15
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.7e-40 Score=384.48 Aligned_cols=323 Identities=15% Similarity=0.203 Sum_probs=255.3
Q ss_pred hhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCcccccC------CCCCcceeccCCCCC
Q psy2417 27 QNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSGA------SEGKFLSTLYDDVKT 84 (391)
Q Consensus 27 l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~t 84 (391)
|++.+.. ++++.++++|++++|++.+ ..+....+..++.... ...+....+.+...+
T Consensus 3018 l~l~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 3096 (3956)
T PRK12467 3018 LTLAVGL-GDTLELEFSYDRQHFDAAAIERLAESFDRLLQAMLNNPAARLGELPTLAAHERRQVLHAWNATAAAYPSERL 3096 (3956)
T ss_pred eEEEecc-CcceeEEEEechhhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccCCCHHHHHHHHHhhccCCCCCCcccc
Confidence 7776654 6789999999999999976 1222222222211000 011111223344579
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
++++|+++++++||++|+++.+ +.+||+||+++++++|+.|.++|+++|++|+|+++|++++++++|||+++|+
T Consensus 3097 ~~~l~~~~a~~~p~~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa 3170 (3956)
T PRK12467 3097 VHQLIEAQVARTPEAPALVFGD------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGG 3170 (3956)
T ss_pred HHHHHHHHHHhCCCcceEeeCC------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCc
Confidence 9999999999999999999977 7899999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhh
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGA 244 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 244 (391)
++||+||.+|.+++.++++++++++++++... ...+.. . ....++.++.. .....
T Consensus 3171 ~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~-~~~~~~-~--~~~~~~~~~~~---------------------~~~~~ 3225 (3956)
T PRK12467 3171 AYVPLDPEYPRERLAYMIEDSGVKLLLTQAHL-LEQLPA-P--AGDTALTLDRL---------------------DLNGY 3225 (3956)
T ss_pred EeecCCCCChHHHHHHHHhCCCCcEEEechhh-hhhccc-c--cCCceeeecch---------------------hhccc
Confidence 99999999999999999999999999998752 111110 0 11122222221 11111
Q ss_pred ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHh
Q psy2417 245 QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLV 324 (391)
Q Consensus 245 ~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~ 324 (391)
....+.....++++|||+|||||||+||||+++|+++.+.+.+....++ ++++|++++++|++|+.++...+.+|+.
T Consensus 3226 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~---~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 3302 (3956)
T PRK12467 3226 SENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYE---LDANDRVLLFMSFSFDGAQERFLWTLIC 3302 (3956)
T ss_pred CCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcC---CCcCCEEEEecCccHhHHHHHHHHHHhC
Confidence 1111223457899999999999999999999999999999999888888 9999999999999999999888999999
Q ss_pred CcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 325 GGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 325 G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
|+++++.+. ++..+++.|.++++|++.++|++++.+.+.. ...++++||.+++||+....
T Consensus 3303 G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~-~~~~~~~lr~~~~gGe~~~~ 3365 (3956)
T PRK12467 3303 GGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA-GGADCASLDIYVFGGEAVPP 3365 (3956)
T ss_pred CCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc-cccCCCCceEEEEecCCCCH
Confidence 999999864 8899999999999999999999999987642 23456789999999987643
No 16
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.4e-38 Score=320.24 Aligned_cols=291 Identities=18% Similarity=0.221 Sum_probs=225.6
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|+++++.+|+++|+.+.+. ++.++++||+||.++++++|++|.++|+++|++|+|+++|+++|++++|||++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~-~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~ 116 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGA-DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMY 116 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccC-CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 45899999999999999999987532 23357899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCC-----HHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeH
Q psy2417 162 YSMIIVALYDTLG-----PDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRF 236 (391)
Q Consensus 162 ~G~~~vpl~~~~~-----~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+|+++||++|.++ .+++.+++++++++++|++........+.........++..+.... ......|
T Consensus 117 ~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~ 187 (614)
T PRK08180 117 AGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVP---------GRAATPF 187 (614)
T ss_pred cCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCC---------CcccccH
Confidence 9999999999998 7999999999999999998642222222222111122333332110 0012345
Q ss_pred HHHHHhhhccC--CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCC--CCCEEEEcCChHHH
Q psy2417 237 DEIERVGAQKM--FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPK--YSDVLISFLPLAHM 312 (391)
Q Consensus 237 ~~l~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~ 312 (391)
+++........ .......++|+++|+|||||||.||||++||+++.+.+......+. +. .++++++++|++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---~~~~~~~~~l~~lPl~h~ 264 (614)
T PRK08180 188 AALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFP---FLAEEPPVLVDWLPWNHT 264 (614)
T ss_pred HHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhcc---ccCCCCcEEEEecchHHH
Confidence 55543211110 0112346799999999999999999999999999998877766655 43 56899999999999
Q ss_pred HHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-----hcCchhHHHHHHHHH
Q psy2417 313 LERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-----QIRPSFIKRLMFNMA 381 (391)
Q Consensus 313 ~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-----~~~~~slr~~~~gga 381 (391)
+|+... +.+|+.|+++++.+. ++..+++.++++++|+++++|.++..|++.... ..++++||.+++||+
T Consensus 265 ~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa 344 (614)
T PRK08180 265 FGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGA 344 (614)
T ss_pred hhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccC
Confidence 998755 789999999999753 345778899999999999999999999875322 234679999999998
Q ss_pred HHHH
Q psy2417 382 MGSK 385 (391)
Q Consensus 382 ~~~k 385 (391)
...+
T Consensus 345 ~l~~ 348 (614)
T PRK08180 345 ALSQ 348 (614)
T ss_pred CCCH
Confidence 7543
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.6e-38 Score=321.84 Aligned_cols=295 Identities=17% Similarity=0.155 Sum_probs=227.4
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
..+++|+++++.+|+++|+++.+..++..+.+||+||.++++++|++|+++|+++||+|+|+++|++++++++|||+++|
T Consensus 53 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~G 132 (628)
T TIGR02316 53 LCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIG 132 (628)
T ss_pred HHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhC
Confidence 45688888888899999999854222335789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-----------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCce
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSK-----------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIE 232 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (391)
++++|+++.++.+++.+++++++++++|++.... ....+.........++.++...... ......
T Consensus 133 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~~~~~ 208 (628)
T TIGR02316 133 AIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM----RLIPGR 208 (628)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----CcccCc
Confidence 9999999999999999999999999999976421 1111111111345666665321100 000001
Q ss_pred EEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHH-HHHHHhhcCCCCCCCCEEEEcCChHH
Q psy2417 233 IIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAI-SAALLQLSDHRPKYSDVLISFLPLAH 311 (391)
Q Consensus 233 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~-~~~~~~~~~~~~~~~d~~l~~~pl~h 311 (391)
...|+++.........+.....+++++||+|||||||.||||+++|++++... ......++ +.++|++++.+|++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~ 285 (628)
T TIGR02316 209 DVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFG---IRAGQVMFSASDVGW 285 (628)
T ss_pred cccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcC---CCCCcEEEEcCCCCe
Confidence 23555554432111111222467999999999999999999999999986443 34444555 888999999999999
Q ss_pred HHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHH
Q psy2417 312 MLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAM 382 (391)
Q Consensus 312 ~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~ 382 (391)
++|+... +.+|+.|++++++++ ++..+++.|+++++|+++++|++++.|.+.. ....++++||.+++||+.
T Consensus 286 ~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~ 365 (628)
T TIGR02316 286 VVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEP 365 (628)
T ss_pred eehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCC
Confidence 9997654 899999999999763 7889999999999999999999999887652 234567899999999987
Q ss_pred HHH
Q psy2417 383 GSK 385 (391)
Q Consensus 383 ~~k 385 (391)
...
T Consensus 366 l~~ 368 (628)
T TIGR02316 366 LDE 368 (628)
T ss_pred CCH
Confidence 543
No 18
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=6.5e-39 Score=352.86 Aligned_cols=348 Identities=16% Similarity=0.145 Sum_probs=253.0
Q ss_pred chhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCcccccCCCCCc-----ceeccCCCCC
Q psy2417 26 EQNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSGASEGKF-----LSTLYDDVKT 84 (391)
Q Consensus 26 ~l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t 84 (391)
||.+.+...++++.++|+|++++|++.+ ..+........+........+ ...+.....+
T Consensus 158 dl~~~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1389)
T TIGR03443 158 DLTVFLTPSSPELELSIYYNSLLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDPTKDLDWSGFRGA 237 (1389)
T ss_pred ceEEEEEecCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhccccccCcCcccCc
Confidence 5899999999999999999999999976 122222222221100000000 0001112358
Q ss_pred HHHHHHHHHHhcCCCceEEEeecC---CCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNI---SRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~---~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
++++|+++++++||++|+++.... ....+.+||+||+++++++|++|.+.|+++|++|+|+++|++++++++|||++
T Consensus 238 l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~ 317 (1389)
T TIGR03443 238 IHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLK 317 (1389)
T ss_pred HHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHh
Confidence 999999999999999999864311 12347899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCc-chhHH-Hhhccc------CccEEEEecCcchHHHHHHhhCCceE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDS-KCNQI-IDRAPR------CLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~-~~~~~-~~~~~~------~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
+|+++||++|.++.+++.+++++++++++++.... ..... ...... .+..+...+..... .....
T Consensus 318 ~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~- 390 (1389)
T TIGR03443 318 AGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLV------GGSLE- 390 (1389)
T ss_pred hCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccc------ccccc-
Confidence 99999999999999999999999999999987641 01111 110000 11111111110000 00000
Q ss_pred EeHHHHHHhhh--ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHH
Q psy2417 234 IRFDEIERVGA--QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAH 311 (391)
Q Consensus 234 ~~~~~l~~~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 311 (391)
....+...... ..........+++++||+|||||||.||||+++|+++++.+.+....++ +.++|++++++|++|
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~---~~~~d~~~~~~~~~~ 467 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFG---LSENDKFTMLSGIAH 467 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC---CCCCCEEEEecCcee
Confidence 00000000000 0001112346789999999999999999999999999999988888887 899999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 312 MLERTCESAMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 312 ~~g~~~~~~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
+.++..++.+|+.|+++++.+. ++..+++.|.++++|+++++|++++.|.... ..++++||.+++||+...+
T Consensus 468 d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~--~~~~~~lr~~~~gGe~l~~ 543 (1389)
T TIGR03443 468 DPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA--TTPIPSLHHAFFVGDILTK 543 (1389)
T ss_pred cchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc--cccCCCccEEEEecccCCH
Confidence 9999988999999999999754 6889999999999999999999999887532 2346789999999886544
No 19
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.9e-39 Score=351.07 Aligned_cols=324 Identities=15% Similarity=0.127 Sum_probs=251.5
Q ss_pred cchhhhhc-cccchhhhhhhhccccccccc----------------CCCCccCccCccccc-----CCCCCcceeccCCC
Q psy2417 25 REQNLALV-GTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSG-----ASEGKFLSTLYDDV 82 (391)
Q Consensus 25 ~~l~~~~~-~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 82 (391)
.||++.+. +.++++.++++|++++|++.+ ..+........+... +...+-...+.+ .
T Consensus 379 ~dl~l~~~~~~~~~l~~~~~y~~~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~ 457 (1296)
T PRK10252 379 NDLELALFPDEHGGLSIEILANPQRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYAQLAQVNATAVEIP-E 457 (1296)
T ss_pred CCeEEEEEECCCCcEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHHHHHHhcCCCCCCC-c
Confidence 36888887 566789999999999999876 112211111111000 000000111122 3
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.++|+++++.+|+++|+.+.+ +.+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~ 531 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADAR------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEA 531 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCC------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 589999999999999999999876 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHh
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERV 242 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 242 (391)
|+++||++|.++.+++.++++++++++++++... ...+ .... .+ ....++.....
T Consensus 532 G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~-~~~~-~~~~-~~----------------------~~~~~~~~~~~ 586 (1296)
T PRK10252 532 GAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQ-LPRF-ADVP-DL----------------------TSLCYNAPLAP 586 (1296)
T ss_pred CCEEEecCccCHHHHHHHHHHhCCCCEEEECcch-hhhc-ccCC-Cc----------------------eeeeccccccc
Confidence 9999999999999999999999999999998752 1111 1100 01 01111111000
Q ss_pred hhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHH
Q psy2417 243 GAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMF 322 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L 322 (391)
..........+++++||+|||||||.||||+++|+++.+.+.+....++ +.++|++++.+|++|++++...+.+|
T Consensus 587 --~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~---~~~~d~~l~~~~~~fd~~~~~~~~~l 661 (1296)
T PRK10252 587 --QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYP---LTADDVVLQKTPCSFDVSVWEFFWPF 661 (1296)
T ss_pred --ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC---CCCCCEEEEeCCcchhhhHHHHHHHH
Confidence 0001112236789999999999999999999999999999999888888 99999999999999999999889999
Q ss_pred HhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHH
Q psy2417 323 LVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQ---IRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 323 ~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~---~~~~slr~~~~gga~~~k 385 (391)
+.|+++++.+. ++..+.+.++++++|++.++|+++..+.+..... ..++++|.+++||+....
T Consensus 662 ~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~ 731 (1296)
T PRK10252 662 IAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPA 731 (1296)
T ss_pred hCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCH
Confidence 99999999753 8899999999999999999999999988763221 235689999999986543
No 20
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-38 Score=322.93 Aligned_cols=293 Identities=16% Similarity=0.200 Sum_probs=225.3
Q ss_pred CCHH-HHHHHHHHhcCCCceEEEeecC--CCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 83 KTLY-DAFRKGAKESNNGRCLGWRQNI--SRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 83 ~tl~-~~l~~~~~~~pd~~al~~~~~~--~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
.++. ..|++.+..+|+++|+++.+.. +.+.+.+||+||.++++++|++|+++|+++||+|+++++|++|+++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 4444 4666666678999999987631 224578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCc
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAI 231 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (391)
+++|++++|++|.++++++.+++++++++++|+++... ...+.+... ..++.+........ .....
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~---~~~iv~~~~~~~~~---~~~~~ 327 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA---PKAIVLPADGKSVR---VKLRE 327 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC---CcEEEEeCCCCccc---ccccc
Confidence 99999999999999999999999999999999976421 111221111 22333322110000 00001
Q ss_pred eEEeHHHHHHhhhcc----CCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcC
Q psy2417 232 EIIRFDEIERVGAQK----MFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFL 307 (391)
Q Consensus 232 ~~~~~~~l~~~~~~~----~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~ 307 (391)
....|+++....... ...+....++++++|+|||||||.||||+++|++++..+......+. +.++|++++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~---l~~~d~~~~~~ 404 (728)
T PLN03052 328 GDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLD---IRKGDIVCWPT 404 (728)
T ss_pred CCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcC---CCCCcEEEECC
Confidence 134577765432111 01112234689999999999999999999999998877665555555 88999999999
Q ss_pred ChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHH-HHHhcCchhHHHHHHHHHHHH
Q psy2417 308 PLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK-VMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 308 pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~~slr~~~~gga~~~ 384 (391)
|++|+++....+.+|+.|++++++++ ++..+++.++++++|++.++|++++.|.+. .....++++||.+++||+...
T Consensus 405 ~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~ 484 (728)
T PLN03052 405 NLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASS 484 (728)
T ss_pred CcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCC
Confidence 99999999777899999999999876 557899999999999999999999998775 235568889999999998653
No 21
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=6.6e-38 Score=320.28 Aligned_cols=298 Identities=16% Similarity=0.151 Sum_probs=223.1
Q ss_pred HHHHHHHHHH-hcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 85 LYDAFRKGAK-ESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 85 l~~~l~~~~~-~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
..++|+++++ .+|+++|+++.+..++..+.+||+||.++++++|++|+++|+++||+|+|+++|++|+++++|||+++|
T Consensus 90 ~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~G 169 (666)
T PLN02654 90 CYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIG 169 (666)
T ss_pred HHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 4678887776 489999998854323345789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch--------hHHHhhccc------CccEEEEecCcchHHHHHHhhC
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC--------NQIIDRAPR------CLKKIISIREVRMATMQRARSR 229 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~--------~~~~~~~~~------~l~~ii~~~~~~~~~~~~~~~~ 229 (391)
++++|+++.++.+++.+++++++++++|++..... ..+...... .+..++..+.............
T Consensus 170 av~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (666)
T PLN02654 170 AVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQ 249 (666)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccc
Confidence 99999999999999999999999999999875210 001111000 1122222222100000000000
Q ss_pred CceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHH-HHHHHhhcCCCCCCCCEEEEcCC
Q psy2417 230 AIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAI-SAALLQLSDHRPKYSDVLISFLP 308 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~-~~~~~~~~~~~~~~~d~~l~~~p 308 (391)
......|+++.... ..........++|+++|+|||||||.||||+++|++++... ......+. +.++|++++.+|
T Consensus 250 ~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~---~~~~d~~~~~~~ 325 (666)
T PLN02654 250 EGRDVWWQDVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFD---YKPTDVYWCTAD 325 (666)
T ss_pred cCCcccHHHHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcC---CCCCcEEEEcCC
Confidence 00123355544321 11111223467999999999999999999999999987543 44444555 889999999999
Q ss_pred hHHHHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHH
Q psy2417 309 LAHMLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFN 379 (391)
Q Consensus 309 l~h~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~g 379 (391)
++|++|.... +.+|+.|++++++++ ++..+++.|+++++|++..+|++++.|.+.. ..+.++++||.++++
T Consensus 326 ~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~ 405 (666)
T PLN02654 326 CGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSV 405 (666)
T ss_pred chhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEe
Confidence 9999998766 899999999999863 7899999999999999999999999998762 234577899999999
Q ss_pred HHHHHHH
Q psy2417 380 MAMGSKE 386 (391)
Q Consensus 380 ga~~~k~ 386 (391)
|++....
T Consensus 406 Ge~l~~~ 412 (666)
T PLN02654 406 GEPINPS 412 (666)
T ss_pred cCCCCHH
Confidence 9876543
No 22
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.1e-38 Score=317.65 Aligned_cols=289 Identities=18% Similarity=0.207 Sum_probs=227.4
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|+++++++|+++|+.+.+ +.+||+||.++++++|.+|.++|+++|++|+|+++|+++|+++++||+
T Consensus 5 ~~~~~~~~~~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~ 78 (563)
T PLN02860 5 SQAHICQCLTRLATLRGNAVVTISGN------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVA 78 (563)
T ss_pred hhhHHHHHHHHHHHhcCCceEEecCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHh
Confidence 45689999999999999999998755 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--hhHHH-hhcccCccEEEEecCcchHHHHHHhhCCceEEeHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--CNQII-DRAPRCLKKIISIREVRMATMQRARSRAIEIIRFD 237 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--~~~~~-~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
++|++++|+++.++.+++.++++++++++++++.... ...+. ...+ .++.++.++....... ..-..+..++
T Consensus 79 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~----~~~~~~~~~~ 153 (563)
T PLN02860 79 CAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLP-SLMWQVFLESPSSSVF----IFLNSFLTTE 153 (563)
T ss_pred hccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCC-ceeEEEEecCcccccc----cchhhccccc
Confidence 9999999999999999999999999999999987521 11111 1111 3444554443211000 0000111222
Q ss_pred HHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH
Q psy2417 238 EIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC 317 (391)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 317 (391)
++...+...........++++++|+|||||||.||||+++|++++.+.......++ +.++|++++.+|++|++++..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~pl~h~~g~~~ 230 (563)
T PLN02860 154 MLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVG---YGEDDVYLHTAPLCHIGGLSS 230 (563)
T ss_pred hhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcC---CCCCCEEEEecCchhhccHHH
Confidence 22111111111112336789999999999999999999999999987777666666 889999999999999999988
Q ss_pred HHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH---hcCchhHHHHHHHHHHH
Q psy2417 318 ESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA---QIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 318 ~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~---~~~~~slr~~~~gga~~ 383 (391)
.+.++..|+++++.+. ++..+++.++++++|++.++|+++..|.+.... ..++++||.+++||+..
T Consensus 231 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l 300 (563)
T PLN02860 231 ALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSL 300 (563)
T ss_pred HHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcC
Confidence 8999999999998765 999999999999999999999999999876322 24567899999998765
No 23
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=7.4e-39 Score=377.99 Aligned_cols=327 Identities=15% Similarity=0.134 Sum_probs=254.3
Q ss_pred hhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCccccc------CCCCCcceeccCCCCC
Q psy2417 27 QNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSG------ASEGKFLSTLYDDVKT 84 (391)
Q Consensus 27 l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~t 84 (391)
|++.+ .+++++.+++.|++++|++.+ ..+........+... ....+....+.+...+
T Consensus 3643 l~~~~-~~~~~l~~~l~y~~~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3721 (4334)
T PRK05691 3643 LTAVC-YPGDDLGLHLSYDQRYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLLGEQERDFLLDGCNRSERDYPLEQS 3721 (4334)
T ss_pred eEEEE-ecCCceEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCCCHHHHHHHHHhhCCccCCCccccC
Confidence 66644 456789999999999999865 112111111111100 0011112233445679
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
++++|+++++++||++|+.+.+ ..+||+||+++++++|++|.++|+++|++|+|++++++++++++|||+++|+
T Consensus 3722 ~~~~~~~~~~~~p~~~Av~~~~------~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~ 3795 (4334)
T PRK05691 3722 YVRLFEAQVAAHPQRIAASCLD------QQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGA 3795 (4334)
T ss_pred HHHHHHHHHHhCCCceEEEcCC------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCc
Confidence 9999999999999999999988 6899999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--hhHHHhhccc-CccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSK--CNQIIDRAPR-CLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
++|||||++|.+++.++++++++++++++.... ...+...... ....++..+ +...
T Consensus 3796 a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 3854 (4334)
T PRK05691 3796 GYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWE---------------------EVQA 3854 (4334)
T ss_pred EEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeec---------------------cccc
Confidence 999999999999999999999999999988531 1112211110 111111111 1111
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHH
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAM 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~ 321 (391)
.............++++|||+|||||||.||||+++|+++++.+.+....++ ++++|+++++.|++|+.+++..+.+
T Consensus 3855 ~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~fd~s~~~~~~~ 3931 (4334)
T PRK05691 3855 GEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLA---LSEADVIAQTASQSFDISVWQFLAA 3931 (4334)
T ss_pred ccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcC---CCccceEEEecCCchhHHHHHHHHH
Confidence 1111112223457899999999999999999999999999999999888888 9999999999999999999999999
Q ss_pred HHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q psy2417 322 FLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 322 L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k~ 386 (391)
|+.|+++++++. ++..+++.++++++|++.+||++++.+++.. ...+++||.+++||+.....
T Consensus 3932 l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~--~~~~~~lr~~~~gGe~l~~~ 3998 (4334)
T PRK05691 3932 PLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED--RQALDGLRWMLPTGEAMPPE 3998 (4334)
T ss_pred HhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc--cccCCCceEEEecCCcCCHH
Confidence 999999999864 7899999999999999999999999887542 23456899999999876443
No 24
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.9e-38 Score=314.00 Aligned_cols=284 Identities=26% Similarity=0.374 Sum_probs=228.1
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCce-EEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQ-WIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~-~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
...++.+++++.++.+|+++|+.+.+. . .+||+||+++++++|++|++.|+++||+|+|+++|++++++++|||
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~~~-----~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~ 83 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFLGR-----GGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAA 83 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEcCC-----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 356899999999999999999999884 2 4999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc---CccEEEEecCcchHHHHHHhhCCceE-Ee
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR---CLKKIISIREVRMATMQRARSRAIEI-IR 235 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~~~~~~~~~~-~~ 235 (391)
+++|++++|++|.+..+++.++++++++++++++.. .....+.... ....+........ .. ..
T Consensus 84 ~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 150 (534)
T COG0318 84 LRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAE--FAALLEAVAEALPVVLVVLLVGDADD-----------RLPIT 150 (534)
T ss_pred HhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEccc--chhHHHHHhccCCcceEEEecccccc-----------ccccc
Confidence 999999999999999999999999999999999986 3223222221 1122222111100 00 23
Q ss_pred HHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHH
Q psy2417 236 FDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLER 315 (391)
Q Consensus 236 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 315 (391)
++++...............++|+++|+|||||||.||||++||+|++.+.......+... +.++|++++.+|++|++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl 229 (534)
T COG0318 151 LEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGL 229 (534)
T ss_pred HHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHH
Confidence 444422221111111225789999999999999999999999999999988777766522 5788999999999999999
Q ss_pred HHH-HHHHHhCcEEEEeC---CCHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchh-HHHHHHHHHHH
Q psy2417 316 TCE-SAMFLVGGSIGYYS---GDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSF-IKRLMFNMAMG 383 (391)
Q Consensus 316 ~~~-~~~L~~G~~vv~~~---~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~s-lr~~~~gga~~ 383 (391)
... +.+++.|+++++.+ .++..++..+.++++|++.++|.++..+++.. ....+.++ ||.++.||++.
T Consensus 230 ~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~ 303 (534)
T COG0318 230 IVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPL 303 (534)
T ss_pred HHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcC
Confidence 988 55699999999987 38999999999999999999999999988873 34444544 99999999983
No 25
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-38 Score=314.80 Aligned_cols=283 Identities=18% Similarity=0.209 Sum_probs=231.1
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.++|+++++.+||++|+++.+ +.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++||+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDER------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECC------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 389999999999999999999865 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
|+++||+++.++.+++.+++++++++++|++.+. ...+...... .++.++....... .....+..++++.
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 194 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEF-TDLLSALPPDLGRLRAWGGNPDDDE-------PSGSTDETLDDLI 194 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchh-HHHHHhhccccccceEEEEecCccc-------cCCcCcccHHHHh
Confidence 9999999999999999999999999999998752 2222221111 2222222111100 0112345666665
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHH
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESA 320 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~ 320 (391)
..... .+.+...++.++|+|||||||.||||+++|+++.+.+......+. +..+|+++..+|++|++|+...+.
T Consensus 195 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~d~~~~~~p~~~~~g~~~~~~ 268 (549)
T PRK07788 195 AGSST---APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVP---FRAGETTLLPAPMFHATGWAHLTL 268 (549)
T ss_pred cCCCC---CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCC---CCcCCeEEEccchHHHHHHHHHHH
Confidence 43221 222335678899999999999999999999999998887777776 889999999999999999987788
Q ss_pred HHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHH
Q psy2417 321 MFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 321 ~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~~k 385 (391)
++..|+++++.+. ++..+++.+++++||++.++|+++..+.+... ...++++||.+++||+...+
T Consensus 269 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~ 337 (549)
T PRK07788 269 AMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSP 337 (549)
T ss_pred HHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCH
Confidence 9999999998765 99999999999999999999999999987633 34567799999999986543
No 26
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-37 Score=315.55 Aligned_cols=293 Identities=16% Similarity=0.211 Sum_probs=224.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...++.++|+++++++||++|+.+.+..++.++.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++||
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 125 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAA 125 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 34668999999999999999999875421234678999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCH-----HHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHHHHHHhhCCceE
Q psy2417 160 YCYSMIIVALYDTLGP-----DACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~-----~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
+++|++++|++|.++. +++.+++++++++++|++........+..... .+ .++.++.... ....
T Consensus 126 ~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~---------~~~~ 195 (624)
T PRK12582 126 MQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDV-TVVHVTGPGE---------GIAS 195 (624)
T ss_pred HHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCc-eEEEEcCCCc---------cccc
Confidence 9999999999999985 99999999999999999874322322222221 22 2344432210 1122
Q ss_pred EeHHHHHHhhhccC--CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCC---CCEEEEcCC
Q psy2417 234 IRFDEIERVGAQKM--FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKY---SDVLISFLP 308 (391)
Q Consensus 234 ~~~~~l~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~---~d~~l~~~p 308 (391)
..++++........ .......++++++|+|||||||.||||++||+++++.+......+. ... .++++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~---~~~~~~~~~~l~~lP 272 (624)
T PRK12582 196 IAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRP---REPDPPPPVSLDWMP 272 (624)
T ss_pred ccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhcc---ccCCCCCceEEEech
Confidence 34555543221110 0012245789999999999999999999999999988776655443 333 589999999
Q ss_pred hHHHHHHHHH-HHHHHhCcEEEEeCC--C---HHhHHHHHHhcCCcEEecChHHHHHHHHHHH-----HhcCchhHHHHH
Q psy2417 309 LAHMLERTCE-SAMFLVGGSIGYYSG--D---IKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-----AQIRPSFIKRLM 377 (391)
Q Consensus 309 l~h~~g~~~~-~~~L~~G~~vv~~~~--~---~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-----~~~~~~slr~~~ 377 (391)
++|++|+... +.+|..|+++++.+. + ...+++.++++++|+++++|.+++.|++... ...++++||.++
T Consensus 273 l~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~ 352 (624)
T PRK12582 273 WNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMA 352 (624)
T ss_pred HHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEE
Confidence 9999998766 678999999998753 2 3456778899999999999999999876532 223467899999
Q ss_pred HHHHHHHH
Q psy2417 378 FNMAMGSK 385 (391)
Q Consensus 378 ~gga~~~k 385 (391)
+||+....
T Consensus 353 ~gGa~l~~ 360 (624)
T PRK12582 353 YGGATLSD 360 (624)
T ss_pred ecCCCCCH
Confidence 99987644
No 27
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-38 Score=375.35 Aligned_cols=325 Identities=17% Similarity=0.207 Sum_probs=253.2
Q ss_pred hhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCccccc------CCCCCcceeccCCCCC
Q psy2417 27 QNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSG------ASEGKFLSTLYDDVKT 84 (391)
Q Consensus 27 l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~t 84 (391)
|++.+. .++++.++++|++++|+..+ ..+....+...+... ....+....+.+...+
T Consensus 1926 l~l~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~~~~~~~~ 2004 (5163)
T PRK12316 1926 LTLAVT-LGETLSLQYSYDRGHFDAAAIERLDRHLLHLLEQMAEDAQAALGELALLDAGERQRILADWDRTPEAYPRGPG 2004 (5163)
T ss_pred eEEEEe-cCCcEEEEEecChhhCCHHHHHHHHHHHHHHHHHHHhCcccccccccCCCHHHHHHHHHhcCCCCCCCCCCCC
Confidence 666654 46789999999999999876 122222222222110 0001111223344568
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
++++|+++++.+|+++|+.+.+ +.+||+||+++++++|++|.++|+++|++|+|+++|++++++++|||+++|+
T Consensus 2005 ~~~~~~~~a~~~p~~~A~~~~~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa 2078 (5163)
T PRK12316 2005 VHQRIAEQAARAPEAIAVVFGD------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGG 2078 (5163)
T ss_pred HHHHHHHHHHhCCCCeEEEcCC------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhce
Confidence 9999999999999999999877 6899999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhh
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGA 244 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 244 (391)
++|||||.+|.+++.++++++++++++++... ...+ .... .+. .+.++.. ..+...
T Consensus 2079 ~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~-~~~~-~~~~-~~~-~~~~~~~------------------~~~~~~-- 2134 (5163)
T PRK12316 2079 AYVPLDPNYPAERLAYMLEDSGAALLLTQRHL-LERL-PLPA-GVA-RLPLDRD------------------AEWADY-- 2134 (5163)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEeChhh-hhhc-cccc-ccc-eEeccch------------------hhhhcc--
Confidence 99999999999999999999999999998752 1111 1000 111 1111110 000000
Q ss_pred ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHh
Q psy2417 245 QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLV 324 (391)
Q Consensus 245 ~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~ 324 (391)
....+.....+++++||+|||||||.||||+++|+++.+.+.+....++ ++++|++++++|++|+.++..++.+|+.
T Consensus 2135 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~---~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 2211 (5163)
T PRK12316 2135 PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYE---LSPADCELQFMSFSFDGAHEQWFHPLLN 2211 (5163)
T ss_pred CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcC---CCCcceEEEecCchHHHHHHHHHHHHhC
Confidence 1111223457899999999999999999999999999999999888888 8999999999999999999999999999
Q ss_pred CcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 325 GGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 325 G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
|+++++.+. ++..+++.|+++++|++.++|++++.+.+.........+||.+++||+....
T Consensus 2212 G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~ 2275 (5163)
T PRK12316 2212 GARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPA 2275 (5163)
T ss_pred CCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccCCcceeEEEEecccCCH
Confidence 999987653 7899999999999999999999999998764333333489999999987644
No 28
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.4e-38 Score=376.36 Aligned_cols=328 Identities=14% Similarity=0.171 Sum_probs=258.3
Q ss_pred chhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCcccccC------CCCCcceeccCCCC
Q psy2417 26 EQNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSGA------SEGKFLSTLYDDVK 83 (391)
Q Consensus 26 ~l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 83 (391)
||.|.+...++++.+.|+|++++|++.+ ..+.......++.... ...+......+...
T Consensus 432 dL~l~v~~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (5163)
T PRK12316 432 DLTLDTYEKGGRLHAALTYATDLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDAEERGQLVEGWNATAAEYPLQR 511 (5163)
T ss_pred eEEEEEEEcCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCHHHHHHHHHHhcCccccCCCCC
Confidence 4888888889999999999999999876 1222222222211100 00111112223356
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
+++++|+++++++|+++|+.+.+ +.+||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 512 ~~~~~~~~~a~~~p~~~A~~~~~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG 585 (5163)
T PRK12316 512 GVHRLFEEQVERTPEAPALAFGE------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAG 585 (5163)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCC------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 89999999999999999999876 789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhh
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVG 243 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (391)
+++||++|.+|.+++.++++++++++++++... ... ..... . ..++.++.... ... .
T Consensus 586 ~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~-~~~-~~~~~-~-~~~~~~~~~~~------------------~~~-~ 642 (5163)
T PRK12316 586 GAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHL-GRK-LPLAA-G-VQVLDLDRPAA------------------WLE-G 642 (5163)
T ss_pred CEEeccCccCcHHHHHHHHHhCCCCEEEEChhh-hhh-CCccc-C-ceEEEecCcch------------------hhc-c
Confidence 999999999999999999999999999998752 111 11100 1 12333332110 000 0
Q ss_pred hccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHH
Q psy2417 244 AQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFL 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~ 323 (391)
...........+++++||+|||||||.||||+++|+++++.+.+....++ +..+|++++++|++|++++...+.+|+
T Consensus 643 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~---~~~~d~~l~~~p~~fd~~~~~~~~~L~ 719 (5163)
T PRK12316 643 YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYG---LGVGDTVLQKTPFSFDVSVWEFFWPLM 719 (5163)
T ss_pred CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcC---CCCCCEEEeeCCeehHHHHHHHHHHHh
Confidence 11111223356899999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred hCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q psy2417 324 VGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 324 ~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k~ 386 (391)
.|+++++.+. ++..+++.+.++++|++.++|++++.|.+.. ...+++++|.+++||+...+.
T Consensus 720 ~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~~l~~~~~gGe~l~~~ 785 (5163)
T PRK12316 720 SGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDE-DVASCTSLRRIVCSGEALPAD 785 (5163)
T ss_pred CCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcc-ccccCCCccEEEEeeccCCHH
Confidence 9999999752 8999999999999999999999999987642 223567899999999876543
No 29
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.6e-37 Score=316.22 Aligned_cols=296 Identities=19% Similarity=0.229 Sum_probs=229.7
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
....++|+++++.+|+++|+++.+...++.+.+||+||.++++++|++|+++|+++|++|+++++|++++++++|||+++
T Consensus 57 n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 136 (625)
T TIGR02188 57 NVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARI 136 (625)
T ss_pred EHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 35678888888899999999986532334578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-----------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCc
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK-----------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAI 231 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (391)
|++++|+++.++.+++.+++++++++++|+++... ....+...+..++.++.++....... ....
T Consensus 137 Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 212 (625)
T TIGR02188 137 GAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP----WVEG 212 (625)
T ss_pred CCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC----cccc
Confidence 99999999999999999999999999999987521 11112212113455666543211100 0001
Q ss_pred eEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHH-HHhhcCCCCCCCCEEEEcCChH
Q psy2417 232 EIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAA-LLQLSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 232 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~~~~d~~l~~~pl~ 310 (391)
....|+++...... ...+....++++++|+|||||||.||||+++|++++...... ...++ +.++|++++.+|++
T Consensus 213 ~~~~~~~~~~~~~~-~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~ 288 (625)
T TIGR02188 213 RDVWWHDLMAKASA-YCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFD---IKDGDIFWCTADVG 288 (625)
T ss_pred ccccHHHHHhhcCC-CCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccC---CCCCcEEEECCCch
Confidence 12345555543221 112334567899999999999999999999999987655433 33445 78899999999999
Q ss_pred HHHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHH
Q psy2417 311 HMLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMA 381 (391)
Q Consensus 311 h~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga 381 (391)
|+++.... +.+|+.|++++++++ ++..+++.++++++|++.++|++++.|.+.. ..+.++++||.+++||+
T Consensus 289 ~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~ 368 (625)
T TIGR02188 289 WITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGE 368 (625)
T ss_pred hhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 99987664 889999999999753 7899999999999999999999999998752 23456789999999998
Q ss_pred HHHHH
Q psy2417 382 MGSKE 386 (391)
Q Consensus 382 ~~~k~ 386 (391)
.....
T Consensus 369 ~l~~~ 373 (625)
T TIGR02188 369 PINPE 373 (625)
T ss_pred CCCHH
Confidence 76543
No 30
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.6e-37 Score=313.47 Aligned_cols=299 Identities=21% Similarity=0.234 Sum_probs=234.4
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecC--CCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNI--SRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~--~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
..|++++|++.++++|+++|+.+.... ....+++||+||.++++++|++|+++|+++|++|+++++|++++++++|||
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~ 103 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGG 103 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 458999999999999999999875321 123578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc----hhHH---HhhcccCccEEEEecCcchH--HHHHH----
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK----CNQI---IDRAPRCLKKIISIREVRMA--TMQRA---- 226 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~----~~~~---~~~~~~~l~~ii~~~~~~~~--~~~~~---- 226 (391)
+++| +++|+++.++++++.+++++++++++|++.... ...+ ....+ .++.++.++..... ...+.
T Consensus 104 ~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~ 181 (632)
T PRK07529 104 EAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP-ELRTVVEVDLARYLPGPKRLAVPLI 181 (632)
T ss_pred HHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC-cceeEEEecCccccccccccccccc
Confidence 9999 679999999999999999999999999986521 1122 22222 56667666542100 00000
Q ss_pred -hhCCceEEeHHHHHHhhhccC-CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEE
Q psy2417 227 -RSRAIEIIRFDEIERVGAQKM-FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLI 304 (391)
Q Consensus 227 -~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l 304 (391)
...+..+..|++......... .......++++++|+|||||||.||||+++|++++++.......+. +.++|+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~---~~~~d~~l 258 (632)
T PRK07529 182 RRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLG---LGPGDTVF 258 (632)
T ss_pred ccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcC---CCCCCEEE
Confidence 001223445665544322111 1122346799999999999999999999999999998877777776 78999999
Q ss_pred EcCChHHHHHHHHH-HHHHHhCcEEEEeCC----C---HHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHH
Q psy2417 305 SFLPLAHMLERTCE-SAMFLVGGSIGYYSG----D---IKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRL 376 (391)
Q Consensus 305 ~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~----~---~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~ 376 (391)
+.+|++|.+++... +.+|..|+++++.+. + ...+++.++++++|++.++|+++..|.+......++++||.+
T Consensus 259 ~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v 338 (632)
T PRK07529 259 CGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRYA 338 (632)
T ss_pred EecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEEE
Confidence 99999999998866 899999999999753 2 357889999999999999999999998765445577899999
Q ss_pred HHHHHHHHH
Q psy2417 377 MFNMAMGSK 385 (391)
Q Consensus 377 ~~gga~~~k 385 (391)
++||+....
T Consensus 339 ~~gg~~l~~ 347 (632)
T PRK07529 339 LCGAAPLPV 347 (632)
T ss_pred EEcCCCCCH
Confidence 999987643
No 31
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-37 Score=314.57 Aligned_cols=302 Identities=15% Similarity=0.158 Sum_probs=223.8
Q ss_pred CCCHHHHHHHHHHh--cCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 82 VKTLYDAFRKGAKE--SNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 82 ~~tl~~~l~~~~~~--~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
..+..++++++++. +|+++|+++....++..+.+||+||.++++++|.+|+++|+++||+|+|+++|++|+++++|||
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~ 137 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSC 137 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 34567888888765 7999999886421223478999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCc--------chhHHHhhcc--c-CccEEEEecCcch-HHHHH--
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDS--------KCNQIIDRAP--R-CLKKIISIREVRM-ATMQR-- 225 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~--------~~~~~~~~~~--~-~l~~ii~~~~~~~-~~~~~-- 225 (391)
+++|++++|+++.++.+++.+++++++++++|++... ..+.+.+... . ..+.++.+..... .....
T Consensus 138 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 138 ARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred HHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccc
Confidence 9999999999999999999999999999999997531 0111111111 0 2335554421110 00000
Q ss_pred -Hh-hCCceEEeHHHHHHhhhc----cCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhH-HHHHHHHHHHhhcCCCCC
Q psy2417 226 -AR-SRAIEIIRFDEIERVGAQ----KMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGN-VIAAISAALLQLSDHRPK 298 (391)
Q Consensus 226 -~~-~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~-l~~~~~~~~~~~~~~~~~ 298 (391)
.. ........|+++...... .........++++++|+|||||||.||||+++|++ +.+........+. ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~---~~ 294 (647)
T PTZ00237 218 IETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIE---KD 294 (647)
T ss_pred ccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcC---CC
Confidence 00 000022456666543211 11112345689999999999999999999999998 4443333333344 67
Q ss_pred CCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCC-------HHhHHHHHHhcCCcEEecChHHHHHHHHHH------H
Q psy2417 299 YSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGD-------IKNLTEDMKTLKPTIMPAVPRLLNRMYDKV------M 365 (391)
Q Consensus 299 ~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~-------~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~------~ 365 (391)
.+|++++..|++|+++....+.+|+.|+++++++++ +..+++.+++++||++.++|++++.|.+.. .
T Consensus 295 ~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 374 (647)
T PTZ00237 295 IPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIR 374 (647)
T ss_pred CCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccc
Confidence 789999999999998776678999999999997652 578999999999999999999999998752 1
Q ss_pred HhcCchhHHHHHHHHHHHHHH
Q psy2417 366 AQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 366 ~~~~~~slr~~~~gga~~~k~ 386 (391)
...++++||.+++||++....
T Consensus 375 ~~~~l~~Lr~i~~~G~~l~~~ 395 (647)
T PTZ00237 375 SKYDLSNLKEIWCGGEVIEES 395 (647)
T ss_pred cccCcchheEEEecCccCCHH
Confidence 345678999999999876543
No 32
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=7.4e-38 Score=369.59 Aligned_cols=329 Identities=15% Similarity=0.176 Sum_probs=256.5
Q ss_pred chhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCccccc------CCCCCcceeccCCCC
Q psy2417 26 EQNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSG------ASEGKFLSTLYDDVK 83 (391)
Q Consensus 26 ~l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 83 (391)
||++.+...++++.++|+|++++|++.+ ..+.......++... ...........+...
T Consensus 2109 dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~ 2188 (4334)
T PRK05691 2109 DLNLEVTDLDGRLGCCLTYSRDLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQQQLLDSLAGEAGEARLDQ 2188 (4334)
T ss_pred ceEEEEEecCCcEEEEEEECcccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHHHHHHHHhCCCCcCCCccc
Confidence 4888888888999999999999999876 111111111111100 000011111233456
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
+++++|+++++++|+++|+.+.+ +.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|
T Consensus 2189 ~l~~~~~~~a~~~p~~~Av~~~~------~~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~l~~~~s~~~vv~~lailkaG 2262 (4334)
T PRK05691 2189 TLHGLFAAQAARTPQAPALTFAG------QTLSYAELDARANRLARALRERGVGPQVRVGLALERSLEMVVGLLAILKAG 2262 (4334)
T ss_pred chHHHHHHHHHHCCCCeEEEeCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 89999999999999999999876 789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhh
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVG 243 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (391)
+++||+||.+|.+++.++++++++++++++... ...+ ......... +.++... ..+..
T Consensus 2263 ~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~-~~~~-~~~~~~~~~-~~~~~~~-----------------~~~~~-- 2320 (4334)
T PRK05691 2263 GAYVPLDPEYPLERLHYMIEDSGIGLLLSDRAL-FEAL-GELPAGVAR-WCLEDDA-----------------AALAA-- 2320 (4334)
T ss_pred cEeecCCCCChHHHHHHHHHhcCCCEEEeChhh-hhhh-cccccccee-EEeccch-----------------hhhhc--
Confidence 999999999999999999999999999998752 2111 111111111 1111100 00000
Q ss_pred hccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHH
Q psy2417 244 AQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFL 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~ 323 (391)
......+....+++++||+|||||||.||||+++|+++.+.+.+....++ ++++|+++++.|++|+.++...+.+|+
T Consensus 2321 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~---~~~~d~~l~~~~~~fd~~~~~i~~~L~ 2397 (4334)
T PRK05691 2321 YSDAPLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFG---MRADDCELHFYSINFDAASERLLVPLL 2397 (4334)
T ss_pred CCCCCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcC---CCcccEEEEecCccHHHHHHHHHHHHh
Confidence 00111122245789999999999999999999999999999988888888 999999999999999999999999999
Q ss_pred hCcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 324 VGGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 324 ~G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
.|+++++.+. ++..+.+.|+++++|++.++|++++.|.+.........++|.+++||+....
T Consensus 2398 ~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~~~~~~~lr~i~~gGe~l~~ 2462 (4334)
T PRK05691 2398 CGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAGQGEQLPVRMCITGGEALTG 2462 (4334)
T ss_pred CCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhccccCCCceEEEEccccCCH
Confidence 9999999753 7899999999999999999999999998765444455689999999987644
No 33
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.8e-37 Score=307.19 Aligned_cols=280 Identities=22% Similarity=0.237 Sum_probs=221.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.+.|.+.++++|+++|+.+.+. +.+||+||.++++++|++|.+. +|++|+|+++|+++|++++|||++
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~~~-----~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDEQL-----GKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeCCC-----CcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHh
Confidence 46899999999999999999977553 5799999999999999999873 899999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc---CccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR---CLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
+|+++||+++.++.+++.++++++++++++++.+. ...+.+.... ....++.++..... ..+.+
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~ 156 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQL-MQHLAQTHGEDAEYPFSLIYMEEVRKE------------LSFWE 156 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHH-HHHHhhhhhccccccccEEEEehhhhh------------ccHHH
Confidence 99999999999999999999999999999998642 2222211110 01134444321100 01111
Q ss_pred HHHhhh----c-----cCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCCh
Q psy2417 239 IERVGA----Q-----KMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPL 309 (391)
Q Consensus 239 l~~~~~----~-----~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl 309 (391)
....+. . .........++++++|+|||||||.||||++||+++..........+. +..+|++++++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~---~~~~d~~l~~~p~ 233 (539)
T PRK06334 157 KCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFS---PKEDDVMMSFLPP 233 (539)
T ss_pred hhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcC---CCCCceEEEecch
Confidence 100000 0 000112346799999999999999999999999999998877777776 8899999999999
Q ss_pred HHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHH
Q psy2417 310 AHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 310 ~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~k 385 (391)
+|.+|+... +.++..|+++++... ++..+++.|+++++|++.++|++++.|++.. ....++++||.+++||+....
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~ 313 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKD 313 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCH
Confidence 999999765 889999999998753 8999999999999999999999999998764 344567899999999987543
No 34
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=8.8e-37 Score=306.15 Aligned_cols=287 Identities=20% Similarity=0.232 Sum_probs=232.5
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|++.++.+|+++|+++.+...+.++.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~ 102 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSR 102 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 35899999999999999999988653233457999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK-------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+|++++|++|.++.+++.++++++++++++++.... ...+..... .++.++.++.... .
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~ 168 (547)
T PRK13295 103 IGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP-ALRHVVVVGGDGA-------------D 168 (547)
T ss_pred cCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC-CcceEEEecCCCc-------------c
Confidence 999999999999999999999999999999987521 111222222 4556666553211 1
Q ss_pred eHHHHHHhhh-------ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcC
Q psy2417 235 RFDEIERVGA-------QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFL 307 (391)
Q Consensus 235 ~~~~l~~~~~-------~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~ 307 (391)
.+.++..... ..........++++++|+|||||||.||||+++|++++..+......++ +.++|++++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~l~~~ 245 (547)
T PRK13295 169 SFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLG---LGADDVILMAS 245 (547)
T ss_pred CHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhC---CCCCCeEEEec
Confidence 2333321110 0000112346789999999999999999999999999998888777777 88999999999
Q ss_pred ChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 308 PLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 308 pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
|++|.+++... +.++..|+++++.+. ++..+++.++++++|++.++|.++..+.... ....++++||.+++||+...
T Consensus 246 p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~ 325 (547)
T PRK13295 246 PMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIP 325 (547)
T ss_pred CchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCC
Confidence 99999998765 889999999999776 8999999999999999999999999988763 33456778999999987664
Q ss_pred H
Q psy2417 385 K 385 (391)
Q Consensus 385 k 385 (391)
+
T Consensus 326 ~ 326 (547)
T PRK13295 326 G 326 (547)
T ss_pred H
Confidence 4
No 35
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.3e-37 Score=311.19 Aligned_cols=292 Identities=19% Similarity=0.221 Sum_probs=227.2
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
..++|++.++.+|+++|+++.+..++..+.+||+||+++++++|++|.++|+++|++|+++++|++++++++|||+++|+
T Consensus 69 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 148 (637)
T PRK00174 69 SYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGA 148 (637)
T ss_pred HHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 46788888889999999998653223457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-----------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceE
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSK-----------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
+++|+++.++.+++.+++++++++++|+++... ....+...+ .++.++.++...... .......
T Consensus 149 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~ 223 (637)
T PRK00174 149 VHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP-SVEKVIVVRRTGGDV----DWVEGRD 223 (637)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC-CccEEEEEcCCCCCc----CcCCCCc
Confidence 999999999999999999999999999976521 111111122 455666654321100 0001122
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHH-HHHhhcCCCCCCCCEEEEcCChHHH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISA-ALLQLSDHRPKYSDVLISFLPLAHM 312 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~~~~d~~l~~~pl~h~ 312 (391)
..|+++..... ....+....++++++|+|||||||.||||+++|++++..... ....+. +.++|++++.+|++|+
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~ 299 (637)
T PRK00174 224 LWWHELVAGAS-DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFD---YKDGDVYWCTADVGWV 299 (637)
T ss_pred ccHHHHHhhcC-CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccC---CCCCcEEEEcCCchHh
Confidence 34566554221 112233456789999999999999999999999998765443 333345 7889999999999999
Q ss_pred HHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHH
Q psy2417 313 LERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 313 ~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~ 383 (391)
.+.... +.+|+.|+++++.++ ++..+++.|+++++|++.++|++++.|.+... ...++++||.+++||+..
T Consensus 300 ~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l 379 (637)
T PRK00174 300 TGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPI 379 (637)
T ss_pred hhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCC
Confidence 998755 889999999999753 78999999999999999999999999987522 235677999999998875
Q ss_pred HH
Q psy2417 384 SK 385 (391)
Q Consensus 384 ~k 385 (391)
..
T Consensus 380 ~~ 381 (637)
T PRK00174 380 NP 381 (637)
T ss_pred CH
Confidence 43
No 36
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-37 Score=311.55 Aligned_cols=295 Identities=16% Similarity=0.121 Sum_probs=226.3
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
.+++|+++++.+|+++|+++.+..++..+.+||+||.++++++|++|+++|+++|++|+++++|++++++++|||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 57889888888999999998542223457899999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-----------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceE
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSK-----------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
+++|+++.++.+++.+++++++++++|+++... +...+.........++.++...... .......
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~~~~~~ 210 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM----ARVAGRD 210 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----CcccCCc
Confidence 999999999999999999999999999976411 1122222211344566655321100 0001112
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHH-HHHhhcCCCCCCCCEEEEcCChHHH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISA-ALLQLSDHRPKYSDVLISFLPLAHM 312 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~~~~d~~l~~~pl~h~ 312 (391)
..++++.........+.....++++++|+|||||||.||||+++|++++..... ....++ +.++|++++.+|++|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~ 287 (629)
T PRK10524 211 VDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFG---GKAGETFFCASDIGWV 287 (629)
T ss_pred ccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcC---CCCCCEEEEcCCCCee
Confidence 345555432211111122246789999999999999999999999998655443 333455 7889999999999999
Q ss_pred HHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHHH
Q psy2417 313 LERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 313 ~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~~ 383 (391)
++.... +.+|+.|+++++.++ ++..+++.++++++|+++++|++++.+.+.. ....++++||.+++||+..
T Consensus 288 ~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l 367 (629)
T PRK10524 288 VGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPL 367 (629)
T ss_pred ccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCC
Confidence 887655 889999999998753 6889999999999999999999999887652 2345678999999999876
Q ss_pred HHH
Q psy2417 384 SKE 386 (391)
Q Consensus 384 ~k~ 386 (391)
.+.
T Consensus 368 ~~~ 370 (629)
T PRK10524 368 DEP 370 (629)
T ss_pred CHH
Confidence 543
No 37
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-36 Score=309.95 Aligned_cols=299 Identities=17% Similarity=0.183 Sum_probs=226.1
Q ss_pred eeccCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHH
Q psy2417 76 STLYDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIIT 155 (391)
Q Consensus 76 ~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~ 155 (391)
.++.....++.+.+.++ .+|+++|+++.+. ++..+.+||+||.++++++|++|+++|+++|++|+|+++|+++++++
T Consensus 79 ~wf~~~~~n~~~~~~~~--~~~~~~Al~~~~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~ 155 (655)
T PRK03584 79 RWFPGARLNYAENLLRH--RRDDRPAIIFRGE-DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVA 155 (655)
T ss_pred eeCCCCEeeHHHHhhcc--CCCCCeEEEEECC-CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 44444445665555432 5899999998653 33457899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-----------hhHHHhhcccCccEEEEecCcchHHHH
Q psy2417 156 EQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK-----------CNQIIDRAPRCLKKIISIREVRMATMQ 224 (391)
Q Consensus 156 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----------~~~~~~~~~~~l~~ii~~~~~~~~~~~ 224 (391)
+|||+++|++++|+++.++.+++.+++++++++++|+++... +..+....+ .++.++.++......
T Consensus 156 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-- 232 (655)
T PRK03584 156 MLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP-SLEHVVVVPYLGPAA-- 232 (655)
T ss_pred HHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC-CccEEEEEecCCCcc--
Confidence 999999999999999999999999999999999999976421 111222222 445566654321100
Q ss_pred HHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHH-HHHHHHhhcCCCCCCCCEE
Q psy2417 225 RARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAA-ISAALLQLSDHRPKYSDVL 303 (391)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~~~~d~~ 303 (391)
..........|+++................+++++|+|||||||.||||+++|++++.. .......+. +.++|++
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~---~~~~d~~ 308 (655)
T PRK03584 233 -AAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCD---LGPGDRF 308 (655)
T ss_pred -cccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcC---CCCCCEE
Confidence 00011123456666542221111223446799999999999999999999999998644 444455555 8899999
Q ss_pred EEcCChHHHHHHHHHHHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHH
Q psy2417 304 ISFLPLAHMLERTCESAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKR 375 (391)
Q Consensus 304 l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~ 375 (391)
+++.++.|+++. ..+.+|+.|+++++.++ ++..+++.++++++|++..+|+++..+.+.. ....++++||.
T Consensus 309 ~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~ 387 (655)
T PRK03584 309 FWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRT 387 (655)
T ss_pred EEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEE
Confidence 999999998653 34789999999999753 7899999999999999999999999987642 23456789999
Q ss_pred HHHHHHHHHH
Q psy2417 376 LMFNMAMGSK 385 (391)
Q Consensus 376 ~~~gga~~~k 385 (391)
+++||++...
T Consensus 388 i~~~Ge~l~~ 397 (655)
T PRK03584 388 IGSTGSPLPP 397 (655)
T ss_pred EEEecCCCCH
Confidence 9999987644
No 38
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3e-36 Score=297.71 Aligned_cols=265 Identities=21% Similarity=0.280 Sum_probs=221.3
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.|+.+.|++++..+||++|+.+.+ +.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEE------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQL 75 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhC
Confidence 589999999999999999999876 78999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHh
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERV 242 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 242 (391)
|++++|+++.++.+++.++++++++++++++... ....... . ...++++...
T Consensus 76 G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~-~~~~~~~-~--------------------------~~~~~~~~~~ 127 (483)
T PRK03640 76 GAVAVLLNTRLSREELLWQLDDAEVKCLITDDDF-EAKLIPG-I--------------------------SVKFAELMNG 127 (483)
T ss_pred CcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchh-hHHHhhh-c--------------------------cccHHHHhhc
Confidence 9999999999999999999999999999998752 1111100 0 0113333322
Q ss_pred hhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHH
Q psy2417 243 GAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMF 322 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L 322 (391)
............++++++|+|||||||.||||+++|.++...+......++ +.++|++++.+|++|++++...+.++
T Consensus 128 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~g~~~~~~~l 204 (483)
T PRK03640 128 PKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLG---LTEDDCWLAAVPIFHISGLSILMRSV 204 (483)
T ss_pred ccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcC---CCcCcEEEEecCHHHHHHHHHHHHHH
Confidence 111111122346789999999999999999999999999888777666666 88999999999999999998888999
Q ss_pred HhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy2417 323 LVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 323 ~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~ 384 (391)
..|+++++.+. ++..+++.++++++|++.++|+++..+.+.........++|.+++||+...
T Consensus 205 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~ 267 (483)
T PRK03640 205 IYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAP 267 (483)
T ss_pred hcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCC
Confidence 99999999876 999999999999999999999999999865332233358888888886653
No 39
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.4e-36 Score=299.45 Aligned_cols=291 Identities=20% Similarity=0.251 Sum_probs=233.2
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGL-GVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
..|+.++|.+.++.+|+++|+.+.+ +.+||+||.++++++|.+|.+. |+++|++|+|+++|+++++++++||+
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFYG------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeecC------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 4589999999999999999999877 6899999999999999999999 99999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcch--H-----HHHHH------
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRM--A-----TMQRA------ 226 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~--~-----~~~~~------ 226 (391)
++|++++|++|.++.+++.++++++++++++++... ...+...... .++.++..+.... . ...+.
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSEL-APKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPL 161 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccch-hhhHHHHhhccCcceEEEecchhhcccccccCccccccccccc
Confidence 999999999999999999999999999999998763 2333222111 2334443321000 0 00000
Q ss_pred -hhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEE
Q psy2417 227 -RSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLIS 305 (391)
Q Consensus 227 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~ 305 (391)
...+..+..|++...... ........++++++|+|||||||.||||+++|+++++.+......+. +..+|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~d~~l~ 236 (546)
T PRK08314 162 QALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSN---STPESVVLA 236 (546)
T ss_pred ccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC---CCCCceEEE
Confidence 001123345555543321 11223456789999999999999999999999999999888777777 889999999
Q ss_pred cCChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHH
Q psy2417 306 FLPLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAM 382 (391)
Q Consensus 306 ~~pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~ 382 (391)
.+|++|.+|+... +.++..|+++++.+. ++..+++.++++++|++.++|.++..+.... ....+++++|.+++||+.
T Consensus 237 ~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~ 316 (546)
T PRK08314 237 VLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAA 316 (546)
T ss_pred EcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecccc
Confidence 9999999998766 789999999999876 8999999999999999999999999887652 234567799999999976
Q ss_pred HH
Q psy2417 383 GS 384 (391)
Q Consensus 383 ~~ 384 (391)
..
T Consensus 317 ~~ 318 (546)
T PRK08314 317 MP 318 (546)
T ss_pred CC
Confidence 54
No 40
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=4.5e-36 Score=298.81 Aligned_cols=284 Identities=22% Similarity=0.284 Sum_probs=233.6
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
+++++|++.++.+|+++|+.+.+ +++||+||.++++++|.+|++.|+++|++|+++++|+++++++++||+++|
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHD------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 47899999999999999999876 689999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
++++|+++.++.+++..+++++++++++++... ...+...... .+..++.++..... .........|+++..
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 148 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSER-LDLLHPALPGCHDLRTLILVGEPAHA-----SEGGGESPSWPKLLA 148 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccch-hhhhHhhhhcccccceEEEecCcccc-----cCCccccccHHHhhc
Confidence 999999999999999999999999999998753 3322222211 44556666543211 011223445666554
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHH
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAM 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~ 321 (391)
..... .+.+...+++++|+|||||||.||||++||+++...+......+. +..+|++++.+|++|++++...+.+
T Consensus 149 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~~~~~~~~~ 223 (515)
T TIGR03098 149 LGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLE---NRPDDRLLAVLPLSFDYGFNQLTTA 223 (515)
T ss_pred ccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhC---CCcccEEEEECchhhHhHHHHHHHH
Confidence 32211 223345688999999999999999999999999998888877776 8899999999999999999888999
Q ss_pred HHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy2417 322 FLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 322 L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~ 384 (391)
+..|+++++.+. ++..+.+.++++++|++.++|+++..+.+......+++++|.+++||+...
T Consensus 224 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~ 287 (515)
T TIGR03098 224 FYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMP 287 (515)
T ss_pred HHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCC
Confidence 999999999876 899999999999999999999999998765333345678898888887654
No 41
>KOG1176|consensus
Probab=100.00 E-value=1.2e-36 Score=295.81 Aligned_cols=283 Identities=23% Similarity=0.278 Sum_probs=221.6
Q ss_pred hcCCC-ceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCC--CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccC
Q psy2417 95 ESNNG-RCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLG--VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYD 171 (391)
Q Consensus 95 ~~pd~-~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g--v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~ 171 (391)
.++++ +++++.... .+.+||+|+..++.++|.+|.++| +++||+|++++||+++++.+++||++.|++..|++|
T Consensus 28 ~~~~~~~~~i~~~~~---g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np 104 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDSD---GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNP 104 (537)
T ss_pred ccccCcceEEEecCC---CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCc
Confidence 33444 677766521 379999999999999999999876 888999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEe-HHHHHHhhhccCCCC
Q psy2417 172 TLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIR-FDEIERVGAQKMFEE 250 (391)
Q Consensus 172 ~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 250 (391)
.+.+.++.+.+++++++++|++... ...+.+........++++........ ......... +.++...+.... .
T Consensus 105 ~~~~~ei~~~~~~s~~kiif~d~~~-~~~i~~~~~~~~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~ 178 (537)
T KOG1176|consen 105 RLTASEIAKQLKDSKPKLIFVDEDF-YDKISEATSKLALKIIVLTGDEGVIS---ISDLVEDLDAFEDLMPEGLPDG--I 178 (537)
T ss_pred ccCHHHHHHHHHhcCCeEEEEcCch-HHHHHHHHhhcCCceEEEecccCccc---cccccccccchhhccccCCCcc--c
Confidence 9999999999999999999999973 44443333321145555554310000 000011111 333333222221 3
Q ss_pred CCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHH-HHHhCcEEE
Q psy2417 251 VPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESA-MFLVGGSIG 329 (391)
Q Consensus 251 ~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~-~L~~G~~vv 329 (391)
.+...+|++.|+|||||||.||||++||++++.+.......+. +...|+.++.+|++|.+|+...+. .+..|++++
T Consensus 179 ~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~---~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii 255 (537)
T KOG1176|consen 179 RPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWE---LTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTII 255 (537)
T ss_pred ccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhccc---CCCCceEEEechHHHHhHHHHHHHHHHhCCceEE
Confidence 4456799999999999999999999999999999877766666 778999999999999999999966 555566666
Q ss_pred EeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH-HHHhcCchhHHHHHHHHHHHHHHHhh
Q psy2417 330 YYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK-VMAQIRPSFIKRLMFNMAMGSKENEI 389 (391)
Q Consensus 330 ~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~~slr~~~~gga~~~k~~~~ 389 (391)
+.+. ++..+++.|++|++|+++++|.++..|++. ...+.+++++|.+++|||...+....
T Consensus 256 ~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~ 317 (537)
T KOG1176|consen 256 CLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLE 317 (537)
T ss_pred ECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHH
Confidence 6666 999999999999999999999999999998 46778999999999999988776544
No 42
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5.3e-36 Score=305.73 Aligned_cols=300 Identities=13% Similarity=0.136 Sum_probs=221.5
Q ss_pred eeccCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHH
Q psy2417 76 STLYDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIIT 155 (391)
Q Consensus 76 ~~~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~ 155 (391)
.+......++.+.+.+ +.++++|+++.+. ++..+.+||+||.++++++|++|+++|+++||+|+|+++|+++++++
T Consensus 80 ~wf~~~~~n~~~~~~~---~~~~~~a~~~~~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 80 QWFPGARLNYAENLLR---AAGTEPALLYVDE-THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred EECCCCeeeHHHHHhc---cCCCCeEEEEECC-CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 3443444455554443 3578999988653 33457899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--------hhHHH---hhcccCccEEEEecCcchHHHH
Q psy2417 156 EQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--------CNQII---DRAPRCLKKIISIREVRMATMQ 224 (391)
Q Consensus 156 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--------~~~~~---~~~~~~l~~ii~~~~~~~~~~~ 224 (391)
+|||+++|++++|+++.++.+++.+++++++++++|+++... ...+. ...+ .++.++.++........
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 234 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP-TLRAVVHIPYLGPRETE 234 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC-CccEEEEEeCCCCcccc
Confidence 999999999999999999999999999999999999976421 12222 2222 45666665432100000
Q ss_pred HHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHH-HHHHHHHhhcCCCCCCCCEE
Q psy2417 225 RARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIA-AISAALLQLSDHRPKYSDVL 303 (391)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~~~~d~~ 303 (391)
.........|+++................+++++|+|||||||.||||+++|++++. ........++ +.++|++
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~---~~~~d~~ 309 (652)
T TIGR01217 235 --APKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCD---LGPGDRL 309 (652)
T ss_pred --cccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccC---CCCCcEE
Confidence 000012345777654321111112334568999999999999999999999999764 3444444455 8899999
Q ss_pred EEcCChHHHHHHHHHHHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHH---HHHhcCchhHHH
Q psy2417 304 ISFLPLAHMLERTCESAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK---VMAQIRPSFIKR 375 (391)
Q Consensus 304 l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~---~~~~~~~~slr~ 375 (391)
++++|++|+++. ..+.+|+.|++++++++ ++..+++.++++++|++..+|.++..+... .....++++||.
T Consensus 310 ~~~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~ 388 (652)
T TIGR01217 310 FYYTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQC 388 (652)
T ss_pred EEeCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeE
Confidence 999999998643 34689999999999853 678999999999999998888887776543 123457889999
Q ss_pred HHHHHHHHHHH
Q psy2417 376 LMFNMAMGSKE 386 (391)
Q Consensus 376 ~~~gga~~~k~ 386 (391)
+++||++....
T Consensus 389 i~~gGe~l~~~ 399 (652)
T TIGR01217 389 VASTGSPLPPD 399 (652)
T ss_pred EEeecCCCCHH
Confidence 99999876544
No 43
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.6e-36 Score=294.10 Aligned_cols=272 Identities=26% Similarity=0.337 Sum_probs=211.4
Q ss_pred HHHHHHhcCCCceEEE-eecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEE
Q psy2417 89 FRKGAKESNNGRCLGW-RQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIV 167 (391)
Q Consensus 89 l~~~~~~~pd~~al~~-~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~v 167 (391)
|+++++++||++|+++ .+ +++||+||+++++++|.+|.++|+++|++|+|+++|+++++++++||+++|++++
T Consensus 1 f~~~a~~~pd~~a~~~~~~------~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEG------RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHHHHHHSTTSEEEEETTT------EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEE
T ss_pred ChhHHhhCCCceEEEECCC------EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccc
Confidence 7899999999999999 44 8999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHHHHhcCccEEEE----cCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 168 ALYDTLGPDACAFIINQAEISVLIV----DDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 168 pl~~~~~~~~l~~il~~~~~~~vi~----~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
|++|.++.+++.+++++++++++|+ +... ...+...... ....++.++..... ..+.+..
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 140 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIITSEAVDSEP-LKKLKSIFKQEDPSSSIIILDRDDLP-------------KKEALKS 140 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEECHHHSCHH-HHHHHHHHTTSTTTEEEEEESHSSCT-------------TCHHHHH
T ss_pred ccccccccccccccccccceeEEEEeccccccc-cccchhhhcccccccccccccccccc-------------ccccccc
Confidence 9999999999999999999999997 2221 2223332221 33456666532211 0001111
Q ss_pred hhhccCCCCCC-CCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHH--HhhcCCCCCCCCEEEEcCChHHHHHH-HH
Q psy2417 242 VGAQKMFEEVP-PKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAAL--LQLSDHRPKYSDVLISFLPLAHMLER-TC 317 (391)
Q Consensus 242 ~~~~~~~~~~~-~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~~~~d~~l~~~pl~h~~g~-~~ 317 (391)
........ .+ ..++++++|+|||||||.||+|.++|+++++.+.... ..++ ++ |++++++|++|++|+ ..
T Consensus 141 ~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~---~~--d~~l~~~p~~~~~g~~~~ 214 (417)
T PF00501_consen 141 ASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFG---LG--DRILSFLPLSHIFGLISA 214 (417)
T ss_dssp HHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTT---TT--TEEEESS-TTSHHHHHHH
T ss_pred cccccccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccc---cC--ceEEeecccccccccccc
Confidence 11000000 00 0579999999999999999999999999999987764 2222 33 699999999999999 56
Q ss_pred HHHHHHhCcEEEEeCC-C---HHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-----hcCchhHHHHHHHHHHHHHH
Q psy2417 318 ESAMFLVGGSIGYYSG-D---IKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-----QIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 318 ~~~~L~~G~~vv~~~~-~---~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-----~~~~~slr~~~~gga~~~k~ 386 (391)
.+.++..|+++++++. + +..+++.+++++||+++++|++++.+.+.... ..++++||.+++||+...+.
T Consensus 215 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~ 292 (417)
T PF00501_consen 215 LLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPD 292 (417)
T ss_dssp HHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHH
T ss_pred ccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChh
Confidence 6999999999999986 2 46789999999999999999999999885322 24777899998888877554
No 44
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.1e-35 Score=297.67 Aligned_cols=285 Identities=23% Similarity=0.303 Sum_probs=228.7
Q ss_pred cCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 79 YDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 79 ~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
.+...++.+++.++++++|+++|+.+.+. .+++||+||.++++++|++|.+.|+++|++|+++++|+++|+++++|
T Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~a~~~~~~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la 94 (537)
T PLN02246 19 IPNHLPLHDYCFERLSEFSDRPCLIDGAT----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLG 94 (537)
T ss_pred CCCCCcHHHHHHHHHHhCCCCeEEEecCC----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 35566899999999999999999986531 26899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 159 AYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 159 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
|+++|++++|++|.++.+++..+++++++++++++... ...+..........++.++... .....+.+
T Consensus 95 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~ 162 (537)
T PLN02246 95 ASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCY-VDKLKGLAEDDGVTVVTIDDPP-----------EGCLHFSE 162 (537)
T ss_pred HHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccch-HHHHHHHhhcCCceEEEeCCCC-----------CCceeHHH
Confidence 99999999999999999999999999999999998753 3322222111112455554321 11234444
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHH----hhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALL----QLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
+...... ..+.....++++++|+|||||||.||||+++|+++...+..... .+. +..+|++++.+|++|+++
T Consensus 163 ~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~---~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 163 LTQADEN-ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY---FHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HhcCCCC-CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccC---CCCCcEEEEeechHHHHH
Confidence 4332111 11223346789999999999999999999999999988765543 234 789999999999999999
Q ss_pred HHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 315 RTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 315 ~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
+... +.++..|+++++.+. ++..+++.++++++|++.++|.++..|.+.. ....+++++|.+++||+..
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l 310 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPL 310 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcC
Confidence 8766 688999999999876 8999999999999999999999999987653 2344567899999988865
No 45
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.3e-36 Score=301.36 Aligned_cols=287 Identities=19% Similarity=0.223 Sum_probs=230.4
Q ss_pred CCHHHHHHHHHH-hcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAK-ESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~-~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..+++++++++. .+|+++|+.+.+. ...+.+||+||.++++++|.+|.++|+++|++|+++++|++++++++|||++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~ 120 (570)
T PRK04319 43 NIAYEAIDRHADGGRKDKVALRYLDA--SRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALK 120 (570)
T ss_pred eHHHHHHHHhhccCCCCceEEEEECC--CCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 445678888877 4799999988652 1347899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHH-hhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQII-DRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~-~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
+|++++|+++.++++++.++++++++++++++... ..... ...+ .++.++.++.... .......+.++.
T Consensus 121 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~ 190 (570)
T PRK04319 121 NGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPAL-LERKPADDLP-SLKHVLLVGEDVE--------EGPGTLDFNALM 190 (570)
T ss_pred cCcEEcccccccCHHHHHHHHHccCCcEEEEChhh-hhccchhcCC-CceEEEEECCCcC--------CCcCccCHHHHH
Confidence 99999999999999999999999999999998753 22111 1112 4556666654221 011234565554
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-H
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-S 319 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~ 319 (391)
...... .......++++++|+|||||||.||||+++|+++++.+......+. +.++|++++..|+.|.+|.... +
T Consensus 191 ~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~g~~~~~~ 266 (570)
T PRK04319 191 EQASDE-FDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLD---LHEDDVYWCTADPGWVTGTSYGIF 266 (570)
T ss_pred hhcCCc-CCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcC---CCCCceEEecCChHHhhCchHHHH
Confidence 432221 1223346789999999999999999999999999988877777776 8899999999999999987665 8
Q ss_pred HHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 320 ~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~~~k 385 (391)
.++..|+++++... ++..+++.++++++|+++++|++++.+.+.. ....++++||.+++||+....
T Consensus 267 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~ 337 (570)
T PRK04319 267 APWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNP 337 (570)
T ss_pred HHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCH
Confidence 99999999999754 8999999999999999999999999998642 234567799999999976543
No 46
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-35 Score=299.33 Aligned_cols=295 Identities=19% Similarity=0.295 Sum_probs=232.3
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
...|+.++|++.+..+|+++|+.+.+ .+++.+||+||.++++++|++|.+ .|+++|++|+++++|+++++++++||
T Consensus 8 ~~~~~~~~l~~~a~~~~~~~a~~~~~---~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 8 VPLSLTRILEYGSTVHGDTTVTTWGG---AEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred CCCcHHHHHHHHHHhCCCceEEEEcC---CceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 34689999999999999999998743 235899999999999999999996 79999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHH---HhhcccCccEEEEecCcchHHHHHHhhCCceEEeH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQI---IDRAPRCLKKIISIREVRMATMQRARSRAIEIIRF 236 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~---~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+++|++++|++|.++.+++.++++.++++++|++... ...+ ..... .++.++.++................+.+|
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 162 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRL-AEQLGEILKECP-CVRAVVFIGPSDADSAAAHMPEGIKVYSY 162 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhh-HHHHHHHHhhCc-cccEEEEecCcccccchhccccccccccH
Confidence 9999999999999999999999999999999998752 2222 22222 45556665532211100111123445678
Q ss_pred HHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHH--HHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 237 DEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAA--LLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
+++....... .......++++++|+|||||||.||||+++|+++....... ...+. +..+|++++.+|++|+++
T Consensus 163 ~~l~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~---~~~~~~~l~~~pl~h~~g 238 (576)
T PRK05620 163 EALLDGRSTV-YDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLA---VTHGESFLCCVPIYHVLS 238 (576)
T ss_pred HHHhhcCCCc-CCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcC---CCCCCeEEEeCChHHhhh
Confidence 8877533221 11233467899999999999999999999999987654432 22344 788999999999999999
Q ss_pred HHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 315 RTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 315 ~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
+...+.++..|+++++... ++..+++.++++++|++..+|+++..++... ....+..++|.+++||+..+
T Consensus 239 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~ 311 (576)
T PRK05620 239 WGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVP 311 (576)
T ss_pred hHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCC
Confidence 9888899999999998753 8999999999999999999999999988753 23334457888888887543
No 47
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-35 Score=296.81 Aligned_cols=279 Identities=15% Similarity=0.118 Sum_probs=225.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|.+.++++||++|+.+.+ +.+||+||+++++++|++|.++|+++|++|+++++|+++|+++++||++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 115 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDEL------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANR 115 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCC------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHH
Confidence 3579999999999999999999765 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+|+++||+++.++.+++.+++++++++++|++... ...+...... ....++.++... ....++++
T Consensus 116 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 182 (537)
T PRK13382 116 IGADILLLNTSFAGPALAEVVTREGVDTVIYDEEF-SATVDRALADCPQATRIVAWTDED------------HDLTVEVL 182 (537)
T ss_pred cCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhh-HHHHHHHHhhccccceEEEecCCc------------ccccHHHH
Confidence 99999999999999999999999999999998752 2222211110 222333332210 01234444
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHH
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCES 319 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 319 (391)
...... ......+++.++++|||||||.||||+++|+++..........+. +..+++++..+|++|.+|+...+
T Consensus 183 ~~~~~~---~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~~~~g~~~~~ 256 (537)
T PRK13382 183 IAAHAG---QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTP---WRAEEPTVIVAPMFHAWGFSQLV 256 (537)
T ss_pred hhccCc---CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhC---CCCCCeEEEecChHhhhHHHHHH
Confidence 332111 111235688999999999999999999999999988877777776 78899999999999999997779
Q ss_pred HHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 320 ~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~~k 385 (391)
.++..|+++++.+. ++..+++.++++++|++..+|+++..+.+... ...+.+++|.+++||+...+
T Consensus 257 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~ 326 (537)
T PRK13382 257 LAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRP 326 (537)
T ss_pred HHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCH
Confidence 99999999998765 89999999999999999999999999876421 23345689999999876654
No 48
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-35 Score=298.59 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=219.9
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCC----CCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNIS----RPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~----~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
.++.++|++.++++|+++|+.+.+..+ ..++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 478899999999999999998865211 1234899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhH-HHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHH
Q psy2417 159 AYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQ-IIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFD 237 (391)
Q Consensus 159 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~-~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
|+++|++++|++|.++.+++.+++++++++++|++....... +........+.++.++... ......++
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~ 155 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRL----------LWGGTTLA 155 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheecccccc----------ccCCccHH
Confidence 999999999999999999999999999999999975321211 1111111233344333210 00112344
Q ss_pred HHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH
Q psy2417 238 EIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC 317 (391)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 317 (391)
++...............++++++|+|||||||.||||+++|+++.+.+......++ +.++|+.++.+|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~pl~~~~~--- 229 (552)
T PRK09274 156 TLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYG---IEPGEIDLPTFPLFALFG--- 229 (552)
T ss_pred HhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhC---CCCCceeeeccCHHHhhh---
Confidence 44311111111223346789999999999999999999999999999888888777 889999999999988654
Q ss_pred HHHHHHhCcEEEEeC--------CCHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Q psy2417 318 ESAMFLVGGSIGYYS--------GDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 318 ~~~~L~~G~~vv~~~--------~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~ 384 (391)
+..|+++++.+ .++..+++.|+++++|+++++|++++.|.+... ...++++||.+++||+...
T Consensus 230 ----~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~ 301 (552)
T PRK09274 230 ----PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVP 301 (552)
T ss_pred ----hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCC
Confidence 34688888753 278999999999999999999999999988743 4567889999999998653
No 49
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-35 Score=293.02 Aligned_cols=286 Identities=21% Similarity=0.299 Sum_probs=235.6
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.+.|++.++.+|+++|+.+.+ +.+||+||++++.++|..|.+.|+++|++|+++++|+++++++++||++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFGD------QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeCC------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 4689999999999999999999976 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcc--cCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAP--RCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~--~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+|++++|+++.++.+++.++++++++++++++... ......... ..++.++........ ........|+++
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 150 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLF-LGVDYSATTRLPALEHVVICETEEDD------PHTEKMKTFTDF 150 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhh-HHHHHHHHhccCCccEEEEEcCcccc------cCccccccHHHH
Confidence 99999999999999999999999999999998763 222221111 144555554432211 001123466666
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE- 318 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~- 318 (391)
...... .....+..++++++|+|||||||.||||.++|+++.+.+......++ +..+|++++.+|++|.+++...
T Consensus 151 ~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 226 (513)
T PRK07656 151 LAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLG---LTEGDRYLAANPFFHVFGYKAGV 226 (513)
T ss_pred HhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhC---CCCCCeEEEccchHHHHHHHHHH
Confidence 543322 11233457889999999999999999999999999998888888777 8999999999999999998876
Q ss_pred HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~ 384 (391)
+.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+... ...+++++|.+++||+...
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~ 294 (513)
T PRK07656 227 NAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMP 294 (513)
T ss_pred HHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCC
Confidence 889999999998765 89999999999999999999999999987632 3346679999999998653
No 50
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-35 Score=293.13 Aligned_cols=287 Identities=22% Similarity=0.291 Sum_probs=238.1
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|+++++.+|+++|+.+.+ +.+||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+
T Consensus 4 ~~~~l~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 4 YPLTIGRILRHGARKHPDKEAVYFDG------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred ccCCHHHHHHHHHHHCCCceEEEeCC------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 45689999999999999999999887 569999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
++|++++|+++.++.+++..+++.+++++++++.... +..+....+ .++.++.++..... ........+.+
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~ 150 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP-TVRTVIVEGDGPAA------PLAPEVGEYEE 150 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC-CccEEEEecCcccc------ccccccccHHH
Confidence 9999999999999999999999999999999988621 122222222 45566666553211 11223445555
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
+........ ......++++++++|||||||.||+|.++|.++.+........++ +..+|++++.+|++|.+++...
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~ 226 (521)
T PRK06187 151 LLAAASDTF-DFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLK---LSRDDVYLVIVPMFHVHAWGLP 226 (521)
T ss_pred HhhcCCccC-CCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhC---CCCCCEEEEeCCchHHhhHHHH
Confidence 544322211 123446788999999999999999999999999998888877777 8999999999999999999888
Q ss_pred HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~ 384 (391)
+.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+... ...+++++|.+++||+...
T Consensus 227 ~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~ 294 (521)
T PRK06187 227 YLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALP 294 (521)
T ss_pred HHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCC
Confidence 779999999999876 89999999999999999999999999987643 3556779999999887653
No 51
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.1e-35 Score=294.41 Aligned_cols=287 Identities=19% Similarity=0.227 Sum_probs=228.9
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|++.++.+|+++|+...+...+..+.+||+||+++++++|.+|.+.|+++|++|+++++|+++++++++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 35899999999999999999987432122347899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc----hh---HHHhhcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK----CN---QIIDRAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~----~~---~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+|+++||++|.++.+++.++++.+++++++++.... .. .+....+ ..+.++.++.... .
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~ 166 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP-ALRQVVVIDGDGD-------------D 166 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC-cceEEEEecCCCC-------------c
Confidence 999999999999999999999999999999987521 01 1111111 3445555543211 1
Q ss_pred eHHHHHHhhhccC-------CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcC
Q psy2417 235 RFDEIERVGAQKM-------FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFL 307 (391)
Q Consensus 235 ~~~~l~~~~~~~~-------~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~ 307 (391)
.++++........ .......++++++|+|||||||.||||+++|+++...+......++ +..+|++++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~ 243 (538)
T TIGR03208 167 SFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLE---LGGGDVILMAS 243 (538)
T ss_pred CHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcC---CCCCCeEEEeC
Confidence 2222221111000 0112346789999999999999999999999999999888887777 88899999999
Q ss_pred ChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Q psy2417 308 PLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 308 pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~ 384 (391)
|++|.+|+... +.+++.|+++++.+. ++..+++.++++++|++.++|.++..+..... ...+++++|.+++||+..+
T Consensus 244 pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~ 323 (538)
T TIGR03208 244 PMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIP 323 (538)
T ss_pred CchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCC
Confidence 99999998765 889999999998765 89999999999999999999999998876532 3346678999999987654
Q ss_pred H
Q psy2417 385 K 385 (391)
Q Consensus 385 k 385 (391)
.
T Consensus 324 ~ 324 (538)
T TIGR03208 324 G 324 (538)
T ss_pred H
Confidence 3
No 52
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-35 Score=298.42 Aligned_cols=286 Identities=16% Similarity=0.168 Sum_probs=219.2
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.|+.++|++.++.+|+++|+.+.+ ..+||+||+++++++|++|.++|+++|++|+|+++|+++|++++|||+++
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYGK------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEECC------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 478999999999999999999866 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHh---hccc----CccEEEEecCcchHHHHHHhhCCceEEe
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIID---RAPR----CLKKIISIREVRMATMQRARSRAIEIIR 235 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~---~~~~----~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
|++++|+++.++.+++.++|+.++++++|++.+. ...+.. ..+. ....++.++...... ........
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 161 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSF-EPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK-----RPSSEELD 161 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhh-HHHHHHHHhhccccccccCceEEEeccccccc-----CCcccccC
Confidence 9999999999999999999999999999998752 222221 1110 012344444321100 00111234
Q ss_pred HHHHHHhhhccCCC----CCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHH
Q psy2417 236 FDEIERVGAQKMFE----EVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAH 311 (391)
Q Consensus 236 ~~~l~~~~~~~~~~----~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 311 (391)
++++...+...... .....++++++|+|||||||.||||+++|+++..........+. +...++++..+|++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~---~~~~~~~l~~~pl~h 238 (579)
T PLN03102 162 YECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWE---MGTCPVYLWTLPMFH 238 (579)
T ss_pred HHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcC---CCCCCeEEecCChhh
Confidence 55554332211100 01235789999999999999999999999997655444333344 667789999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHH
Q psy2417 312 MLERTCESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 312 ~~g~~~~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~ 383 (391)
.+++...+.+++.|+++++.+. ++..+++.|++++||++.++|+++..|.+... .....++++.+++||+..
T Consensus 239 ~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~ 312 (579)
T PLN03102 239 CNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPP 312 (579)
T ss_pred hcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCC
Confidence 9998877888999999988765 88899999999999999999999999987532 222334667777777643
No 53
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3e-35 Score=294.63 Aligned_cols=281 Identities=17% Similarity=0.150 Sum_probs=223.4
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|++.++.+||++|+.+.+ +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||+
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~ 92 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFGG------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCA 92 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCC------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 35689999999999999999999866 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
++|++++|+++.++.+++.++++++++++++++... ...+...... .++.++.++..... ... ..+..
T Consensus 93 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~ 162 (542)
T PRK06155 93 WLGAIAVPINTALRGPQLEHILRNSGARLLVVEAAL-LAALEAADPGDLPLPAVWLLDAPASV----SVP-----AGWST 162 (542)
T ss_pred HhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhh-HHHHHHhcccccCcceEEEecCcccc----ccc-----cccch
Confidence 999999999999999999999999999999998753 2222221111 34556666543210 000 00110
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
................++++++|+|||||||.||||+++|+++..........++ +.+++++++.+|++|.+++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~---~~~~~~~l~~~pl~~~~~~~~~ 239 (542)
T PRK06155 163 APLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLE---IGADDVLYTTLPLFHTNALNAF 239 (542)
T ss_pred hhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcC---CCCCCEEEEecCHHHHHHHHHH
Confidence 0000011111122346789999999999999999999999999988777777777 8899999999999999999888
Q ss_pred HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNM 380 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gg 380 (391)
+.+++.|+++++.+. ++..+++.|+++++|++.++|+++..|.+... .....+++|.++.||
T Consensus 240 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~ 303 (542)
T PRK06155 240 FQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG 303 (542)
T ss_pred HHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC
Confidence 999999999999776 89999999999999999999999998876532 233345666555444
No 54
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5e-35 Score=295.07 Aligned_cols=294 Identities=22% Similarity=0.289 Sum_probs=228.4
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.+++++.++++|+++|+.+.+ +.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++||++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~~------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 104 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFFG------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLR 104 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3489999999999999999999866 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHH--------------H---
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMAT--------------M--- 223 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~--------------~--- 223 (391)
+|++++|++|.++.+++.+++++++++++|++... ...+...... .++.++.++...... .
T Consensus 105 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
T PRK05605 105 LGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKV-APTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKAR 183 (573)
T ss_pred cCcEEeecCcCCCHHHHHHHHhccCCcEEEechhh-HHHHHhhhhccccceeEeeecccccccccccccccccccccccc
Confidence 99999999999999999999999999999997752 2222211111 344454443211000 0
Q ss_pred HHHhhCCceEEeHHHHHHhhhccC---CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCC
Q psy2417 224 QRARSRAIEIIRFDEIERVGAQKM---FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYS 300 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~ 300 (391)
+...........|+++........ .......++++++|+|||||||.||||+++|+++...+......+... ...+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~ 262 (573)
T PRK05605 184 AALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGL-GDGP 262 (573)
T ss_pred cccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhcccc-CCCC
Confidence 000001223456766654322110 112234678999999999999999999999999988776544433210 2347
Q ss_pred CEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHH
Q psy2417 301 DVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLM 377 (391)
Q Consensus 301 d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~ 377 (391)
+++++.+|++|.+|+... +.+++.|+++++.+. ++..+++.+++++||++.++|.+++.|.+.. ....++++||.++
T Consensus 263 ~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~ 342 (573)
T PRK05605 263 ERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAF 342 (573)
T ss_pred cEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEE
Confidence 899999999999998766 678999999998765 9999999999999999999999999998763 3455678999999
Q ss_pred HHHHHH
Q psy2417 378 FNMAMG 383 (391)
Q Consensus 378 ~gga~~ 383 (391)
+||+..
T Consensus 343 ~gg~~l 348 (573)
T PRK05605 343 SGAMAL 348 (573)
T ss_pred ECCCcC
Confidence 998765
No 55
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-35 Score=293.47 Aligned_cols=288 Identities=17% Similarity=0.146 Sum_probs=226.8
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHH
Q psy2417 78 LYDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQ 157 (391)
Q Consensus 78 ~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~l 157 (391)
+.+...++.++|++.++.+|+++|+...+ +.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++
T Consensus 5 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 78 (540)
T PRK06164 5 AAPRADTLASLLDAHARARPDAVALIDED------RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFL 78 (540)
T ss_pred cccCCCCHHHHHHHHHHhCCCCeEEecCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHH
Confidence 34556689999999999999999998654 689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc---hhHHHhhcc----cCccEEEEecCcchHHHHHHhhCC
Q psy2417 158 GAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK---CNQIIDRAP----RCLKKIISIREVRMATMQRARSRA 230 (391)
Q Consensus 158 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~---~~~~~~~~~----~~l~~ii~~~~~~~~~~~~~~~~~ 230 (391)
||+++|++++|+++..+.+++.++++++++++++++.+.. +...+.... ..++.++.++...... ..
T Consensus 79 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 152 (540)
T PRK06164 79 ACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT------PA 152 (540)
T ss_pred HHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccC------CC
Confidence 9999999999999999999999999999999999987631 111111111 1345555554211000 00
Q ss_pred ceEEeHHHHHHhhhccCC---CCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcC
Q psy2417 231 IEIIRFDEIERVGAQKMF---EEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFL 307 (391)
Q Consensus 231 ~~~~~~~~l~~~~~~~~~---~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~ 307 (391)
.....+.++......... ......++++++++|||||||.||||+++|+++.+.+......++ +..++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~l~~~ 229 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYG---YDPGAVLLAAL 229 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcC---CCCCCEEEEcC
Confidence 000001111100000000 011234688999999999999999999999999999888888887 88999999999
Q ss_pred ChHHHHHHHHHHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHH
Q psy2417 308 PLAHMLERTCESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNM 380 (391)
Q Consensus 308 pl~h~~g~~~~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gg 380 (391)
|++|.+|+...+.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+......+++++|.+.+++
T Consensus 230 p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~ 303 (540)
T PRK06164 230 PFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFAS 303 (540)
T ss_pred CchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeecc
Confidence 99999999877999999999998775 89999999999999999999999999988744456677888765554
No 56
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=8.6e-35 Score=289.84 Aligned_cols=286 Identities=20% Similarity=0.258 Sum_probs=221.1
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|++.++++|+++|+.+.+. +++++.+||+||.++++++|++|.++|+++|++|+++++|+++++++++||++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~~~-~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFESS-GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcccC-CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 45899999999999999999988652 34468899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHh---hcccCccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIID---RAPRCLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~---~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
+|++++|+++.++.+++.++++++++++++++... ...+.+ .....++.++..+..... ...+..+++
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 155 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQF-YPMYRQIQQEDATPLRHICLTRVALPA--------DDGVSSFTQ 155 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecch-hHHHHHHHhhccccCcEEEEecCCCcc--------cccccCHHH
Confidence 99999999999999999999999999999998853 222222 112144556655542110 112334444
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
+............+..++++++|+|||||||.||||+++|+|+............ +..++++++.+|++|..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 156 LKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCA---LRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcC---CCCCCeEEEecCcHHHHHHHHH
Confidence 4332221111223346789999999999999999999999999865433222223 7789999999999998776665
Q ss_pred -HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHH
Q psy2417 319 -SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNM 380 (391)
Q Consensus 319 -~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gg 380 (391)
+.++..|+++++.+. ++..+++.++++++|++.++|.+++.+..... ......++|.+++++
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~ 297 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL 297 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec
Confidence 789999999999876 89999999999999999999999998876421 112234566555543
No 57
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-36 Score=298.67 Aligned_cols=282 Identities=18% Similarity=0.162 Sum_probs=217.1
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.+.|.++++.+|+++|+.+.+. .+.+||+||+++++++|++|.+.|+++|++|+|+++|++++++++|||++
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRCDG----TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeecCC----CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 45899999999999999999986442 25799999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch--hHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC--NQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~--~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+|++++|+++.++.+++.++++.+++++++++..... ..+.+... .+. ++.++..... . . ..+.+
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~--------~--~-~~~~~ 155 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH-SIP-VIAVDIAAVT--------R--E-SEHSL 155 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc-ccc-eeEeeccccc--------c--c-ccccc
Confidence 9999999999999999999999999999999875311 11111111 222 2223221100 0 0 00000
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHh-hcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQ-LSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
. ...........++++++|+|||||||.||||+++|+++.++....... ........+++.++.+|++|.+++...
T Consensus 156 -~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~ 232 (540)
T PRK05857 156 -D--AASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWI 232 (540)
T ss_pred -c--ccccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHH
Confidence 0 000001123467899999999999999999999999998765443221 000015678899999999999999877
Q ss_pred HHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~ 383 (391)
+.+++.|+++++.+.++..+++.+++++||+++++|.++..+.+... ...+++++|.+++||+..
T Consensus 233 ~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~ 298 (540)
T PRK05857 233 LTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRA 298 (540)
T ss_pred HHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccC
Confidence 89999999988766689999999999999999999999999987632 345677999999998764
No 58
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-35 Score=289.62 Aligned_cols=268 Identities=22% Similarity=0.232 Sum_probs=220.7
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.+.+.|++.++.+||++|+.+.+ +.+||+||+++++++|++|++ .|+.+|++|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~------~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEE------EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECC------ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57899999999999999999865 799999999999999999985 79999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
|++++|+++.++.+++.++++++++++++++... .. ....... ....++.+++ ++++.
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~~~~~~~------------------~~~~~ 136 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTF-QN-MALSMQKVSYVQRVISITS------------------LKEIE 136 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHH-HH-HHHHhhhccCcceEEEecc------------------hHhhh
Confidence 9999999999999999999999999999998752 22 2222111 1223333321 22222
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-H
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-S 319 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~ 319 (391)
.. ......+..++++++|+|||||||.||||+++|+++..........++ +..+|+++..+|++|.+|+... +
T Consensus 137 ~~---~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~g~~~~~~ 210 (496)
T PRK06839 137 DR---KIDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAID---LTMHDRSIVLLPLFHIGGIGLFAF 210 (496)
T ss_pred cc---CCCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcC---CCCCCeEEEeeCCcchhhHHHHHH
Confidence 11 111223446789999999999999999999999999877666666666 8899999999999999998776 7
Q ss_pred HHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 320 ~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
.++..|+++++.+. ++..+++.++++++|++.++|.+++.+.+.. ....+++++|.+++||+..
T Consensus 211 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~ 276 (496)
T PRK06839 211 PTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPC 276 (496)
T ss_pred HHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCC
Confidence 89999999988765 9999999999999999999999999998763 2345677999999999765
No 59
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-35 Score=291.28 Aligned_cols=291 Identities=19% Similarity=0.258 Sum_probs=229.1
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|++.++.+|++.++.+.. +++++.+||.||+++++++|++|.+.|+++|++|+++++|+++++++++||++
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~ 86 (539)
T PRK07008 9 PLLISSLIAHAARHAGDTEIVSRRV--EGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSG 86 (539)
T ss_pred CCCHHHHHHHHHhhCCCceEEEeec--cCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 3579999999999999998887643 22357899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHh---hcccCccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIID---RAPRCLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~---~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
+|++++|++|.++.+++.++++.+++++++++... ...+.+ ... .++.++.++..... ....+.+..+++
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 159 (539)
T PRK07008 87 SGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTF-LPLVDALAPQCP-NVKGWVAMTDAAHL-----PAGSTPLLCYET 159 (539)
T ss_pred cCcEEeecccccCHHHHHHHHhccCCcEEEEcchh-HHHHHHHHhhCC-CceEEEEEccCCcc-----ccCCcccccHHH
Confidence 99999999999999999999999999999998752 222221 222 44455554432110 011234566777
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHH--HHHhhcCCCCCCCCEEEEcCChHHHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISA--ALLQLSDHRPKYSDVLISFLPLAHMLERT 316 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 316 (391)
+........ ......++++++|+|||||||.||||++||++++..... ....++ +..+|+++..+|++|.+++.
T Consensus 160 l~~~~~~~~-~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~h~~~~~ 235 (539)
T PRK07008 160 LVGAQDGDY-DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMG---LSARDAVLPVVPMFHVNAWG 235 (539)
T ss_pred HhcccCCCc-CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccC---CCCCceEEecCchHHhhhHH
Confidence 654322211 122346788999999999999999999999998754322 223444 78899999999999998887
Q ss_pred HHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHH
Q psy2417 317 CESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 317 ~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~k 385 (391)
..+.++..|+++++.+. ++..+++.++++++|++.++|+++..+.+... ...+++++|.+++||+...+
T Consensus 236 ~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~ 307 (539)
T PRK07008 236 LPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPP 307 (539)
T ss_pred HHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCH
Confidence 77888999999998754 88999999999999999999999999987633 34567799999998876544
No 60
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.6e-35 Score=291.31 Aligned_cols=284 Identities=18% Similarity=0.167 Sum_probs=226.9
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|+++++.+|+++|+.+.+ +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||+
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~ 94 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICGN------RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALL 94 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeCC------ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 35689999999999999999998765 799999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch---hHHHhhccc---CccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC---NQIIDRAPR---CLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~---~~~~~~~~~---~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
++|++++++++..+.+++.++++.+++++++++..... ......... .++.++........ .
T Consensus 95 ~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 162 (527)
T TIGR02275 95 KLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVE------------A 162 (527)
T ss_pred HcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCc------------c
Confidence 99999999999999999999999999999999875211 111111111 33444443321000 0
Q ss_pred eHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 235 RFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 235 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
.+......... ........++++++|+|||||||.||||+++|+++...+......+. +..+|++++.+|++|.++
T Consensus 163 ~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 163 ELFLWLESPAE-PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICW---LTQQTRYLCALPAAHNYP 238 (527)
T ss_pred hhhHHhhCcCc-cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC---CCcCCEEEECCChHhhhh
Confidence 01111111100 11122346789999999999999999999999999998888777776 889999999999999999
Q ss_pred HHH--HHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHH
Q psy2417 315 RTC--ESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 315 ~~~--~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~k~ 386 (391)
+.. .+.++..|+++++.+. ++..+++.++++++|++..+|.++..+.+.. ....+++++|.+++||+...+.
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~ 314 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEA 314 (527)
T ss_pred hhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHH
Confidence 875 4788999999998765 8999999999999999999999999887763 3345667899999999876443
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2e-35 Score=304.91 Aligned_cols=281 Identities=17% Similarity=0.187 Sum_probs=218.1
Q ss_pred CCCCHHHHHHHHHHhcCC-CceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNN-GRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd-~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
...|+.++|++.++++|+ ++|+.+.+ ++.+||+||.++++++|++|.+. +++||+|+|+++|++||++++|||
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~-----~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~ 275 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVN-----FTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGA 275 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCC-----CCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHH
Confidence 456899999999999998 57776432 26799999999999999999987 599999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhH-----HHhhcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQ-----IIDRAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~-----~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+++|++++|+++.++.+++.+++++++++++|++.+. ... +..... .++ ++.++..... .
T Consensus 276 ~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~-~~~~~~~~~~~~~~-~~~-~i~~~~~~~~------------~ 340 (718)
T PRK08043 276 SLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQF-LDKGKLWHLPEQLT-QVR-WVYLEDLKDD------------V 340 (718)
T ss_pred HHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHH-HhhccCCChhhhhc-ccc-EEEhhhhhhh------------c
Confidence 9999999999999999999999999999999997642 111 000011 112 2222211000 0
Q ss_pred eHHHH-H-Hhhh-ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHH
Q psy2417 235 RFDEI-E-RVGA-QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAH 311 (391)
Q Consensus 235 ~~~~l-~-~~~~-~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 311 (391)
.+.+. . .... .......+..++|+++|+|||||||.||||+++|+++.+.+......++ +.++|++++.+|++|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~---~~~~d~~l~~~Pl~h 417 (718)
T PRK08043 341 TTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIAD---FTPNDRFMSALPLFH 417 (718)
T ss_pred chhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhC---CCccCeEEEcCcchh
Confidence 11110 0 0000 0011112346799999999999999999999999999998887777776 889999999999999
Q ss_pred HHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q psy2417 312 MLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 312 ~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k~ 386 (391)
.+++... +.+|..|+++++.+. ++..+.+.+.++++|+++.+|+++..+.+. ....++++||.+++||+.....
T Consensus 418 ~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~-~~~~~~~~lr~i~~gg~~l~~~ 494 (718)
T PRK08043 418 SFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARF-ANPYDFARLRYVVAGAEKLQES 494 (718)
T ss_pred hhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhh-cCcccccceEEEEEeCccCCHH
Confidence 9998765 789999999998764 667888999999999999999999887653 2334677899999999876443
No 62
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-34 Score=290.98 Aligned_cols=295 Identities=18% Similarity=0.239 Sum_probs=222.6
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
.|+.++|++.++.+|+++|+...+ +.+||+||+++++++|++|.+ .|+++|++|+++++|+++|++++|||++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~ 97 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLG------KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMR 97 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECC------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 589999999999999999998765 689999999999999999997 6999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcc--hHHHH-HH-----------
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVR--MATMQ-RA----------- 226 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~--~~~~~-~~----------- 226 (391)
+|++++|++|.++.+++.+++++++++++|++... ...+.+.... .++.++..+... ..... ..
T Consensus 98 ~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK05677 98 AGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANM-AHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMV 176 (562)
T ss_pred cCeEEeecCCCCCHHHHHHHHhccCceEEEEecch-hhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccc
Confidence 99999999999999999999999999999997652 2211111111 344444432110 00000 00
Q ss_pred hh-CCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCC-CCCEEE
Q psy2417 227 RS-RAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPK-YSDVLI 304 (391)
Q Consensus 227 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~-~~d~~l 304 (391)
.. .......+.+................++++++|+|||||||.||||+++|+++...+......+... +. ..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~ 255 (562)
T PRK05677 177 PAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSN-LNEGCEILI 255 (562)
T ss_pred cccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccC-CCCCccEEE
Confidence 00 0001233444443322221122345679999999999999999999999999988776655544311 23 347889
Q ss_pred EcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHH
Q psy2417 305 SFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNM 380 (391)
Q Consensus 305 ~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gg 380 (391)
+.+|++|.+++... +..+..|+++++.+. ++..+++.++++++|.++.+|.++..+.+.. ....+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 99999999998765 678888888777653 8899999999999999999999999887652 2334567899999999
Q ss_pred HHHHH
Q psy2417 381 AMGSK 385 (391)
Q Consensus 381 a~~~k 385 (391)
+....
T Consensus 336 ~~~~~ 340 (562)
T PRK05677 336 MALQL 340 (562)
T ss_pred ccCCH
Confidence 87543
No 63
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=9e-35 Score=291.66 Aligned_cols=284 Identities=19% Similarity=0.233 Sum_probs=227.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..|+.++|+++++.+||++|+.+.+. +.+||+||+++++++|++|++.|+++|++|+++++|+++++++++||++
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDNHG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcCCC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 35799999999999999999987542 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc----hhHHH---hhcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK----CNQII---DRAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~----~~~~~---~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+|++++|+++.++.+++.++++++++++++++.... ...+. .... .++.++.++..... ....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~ 166 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP-QLQQIVGVDKLAPA---------TSSL 166 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC-CCcEEEEeCCcCCC---------cCcc
Confidence 999999999999999999999999999999976321 11111 1121 44456666543211 1112
Q ss_pred eHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 235 RFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 235 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
.+.++....... ..+.....+++++|+|||||||.||||+++|.++..........++ +.++|++++.+|++|++|
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~---~~~~d~~l~~~pl~h~~g 242 (547)
T PRK06087 167 SLSQIIADYEPL-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLN---LTWQDVFMMPAPLGHATG 242 (547)
T ss_pred CHHHHhccCCcc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC---CCCCCeEEEecchHHHHH
Confidence 444443322111 1223346789999999999999999999999999988777776666 889999999999999999
Q ss_pred HHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 315 RTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 315 ~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
+... +.+++.|+++++.+. ++..+++.+.++++|+++.+|..+..+++.. ....+++++|.+++||+...
T Consensus 243 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~ 315 (547)
T PRK06087 243 FLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIP 315 (547)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCC
Confidence 8766 788999999999876 8999999999999999998877776666653 34456678999999987643
No 64
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-35 Score=301.98 Aligned_cols=264 Identities=16% Similarity=0.118 Sum_probs=213.2
Q ss_pred CCHHHHHHHHHHh--cCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 83 KTLYDAFRKGAKE--SNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 83 ~tl~~~l~~~~~~--~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
.++.++|.+.++. +||++|+.+ + ..+||+||+++++++|++|.++|+++|++|+|+++|+++|+++++||+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~-~------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~ 76 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYA-A------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACL 76 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEe-c------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 4789999998886 799999975 2 369999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
++|++++|++|.++.+++.+++++++++++|++... ...+ . .. .+ ....++.
T Consensus 77 ~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~-~~~~----~-~~-~~---------------------~~~~~~~ 128 (705)
T PRK06060 77 ARGVMAFLANPELHRDDHALAARNTEPALVVTSDAL-RDRF----Q-PS-RV---------------------AEAAELM 128 (705)
T ss_pred HhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHH-hhhh----c-cc-cc---------------------chhhhhh
Confidence 999999999999999999999999999999998642 1111 0 00 00 0011111
Q ss_pred Hhhhc-cCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHH-HhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 241 RVGAQ-KMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAAL-LQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
..... ......+..+++++||+|||||||.||||+++|+++.+++.... ..+. +.++|++++..|++|.+++...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~ 205 (705)
T PRK06060 129 SEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALR---LTPEDTGLCSARMYFAYGLGNS 205 (705)
T ss_pred hhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhC---CCCcceeEEeccchhhcchhHH
Confidence 11000 01111234578999999999999999999999999998876654 3455 8889999999999999998654
Q ss_pred -HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 319 -SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 319 -~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
+.+|..|+++++.+. ++..+.+.+.++++|+++++|+++.++.+... ..++++||.+++||+...+
T Consensus 206 ~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~slr~i~~gGe~l~~ 274 (705)
T PRK06060 206 VWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS-PDSFRSLRCVVSAGEALEL 274 (705)
T ss_pred HHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc-cccccceeEEEEecCcCCH
Confidence 789999999999764 78888999999999999999999999886532 2356789999999987644
No 65
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-34 Score=288.98 Aligned_cols=286 Identities=19% Similarity=0.225 Sum_probs=230.3
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|+++++++|+++|+.+.+ +.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++||++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGD------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4689999999999999999999876 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
+|++++|+++.++.+++.++++.+++++++++... ...+.+.... ....+....... .......+..++++.
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 156 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPAL-APTAEAALALLPVDTLILSLVLG------GREAPGGWLDFADWA 156 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccch-HHHHHHHhhhcCccceeeeeccc------ccccccchhhHHHHH
Confidence 99999999999999999999999999999998763 3333222111 111111111000 001112234455444
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-H
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-S 319 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~ 319 (391)
...... ........+++++|+|||||||.||+|.++|++++.........++ +..+|+++..+|++|.+++... +
T Consensus 157 ~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~p~~h~~g~~~~~~ 232 (523)
T PRK08316 157 EAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGD---MSADDIPLHALPLYHCAQLDVFLG 232 (523)
T ss_pred hcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhC---CCCCceEEEccCCchhhhHHHHHH
Confidence 322211 1233456789999999999999999999999999998888777777 8999999999999999998766 5
Q ss_pred HHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 320 ~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+.. ....+++++|.+++||+...
T Consensus 233 ~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~ 299 (523)
T PRK08316 233 PYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMP 299 (523)
T ss_pred HHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCC
Confidence 67899999999865 9999999999999999999999999998763 34456779999999987653
No 66
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-34 Score=290.40 Aligned_cols=286 Identities=22% Similarity=0.294 Sum_probs=226.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|++.++++|+++|+++.+. .+.+||+||.++++++|.+|.+.|+++|++|+|+++|+++|+++++||++
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVRHQ----ALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEecCC----CcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 35899999999999999999988542 26899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch----hHHH---hhcc------------cCccEEEEecCcchHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC----NQII---DRAP------------RCLKKIISIREVRMAT 222 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~----~~~~---~~~~------------~~l~~ii~~~~~~~~~ 222 (391)
+|++++|+++.++.+++.++++++++++++++..... ..+. .... ..++.++.++...
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 169 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP--- 169 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC---
Confidence 9999999999999999999999999999999764211 1111 1100 0223333333211
Q ss_pred HHHHhhCCceEEeHHHHHHhhhccC-----CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCC
Q psy2417 223 MQRARSRAIEIIRFDEIERVGAQKM-----FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRP 297 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 297 (391)
......|+++...+.... .......++++++++|||||||.||||.++|+++.+.+......++ +
T Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~---~ 239 (558)
T PRK12583 170 -------PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLG---L 239 (558)
T ss_pred -------CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhC---C
Confidence 112234444433221110 0112345788999999999999999999999999988888777777 8
Q ss_pred CCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhH
Q psy2417 298 KYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFI 373 (391)
Q Consensus 298 ~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~sl 373 (391)
..+|++++.+|++|.+|.... +.++..|+++++... ++..+++.++++++|+++++|+++..+.... ....+++++
T Consensus 240 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~l 319 (558)
T PRK12583 240 TEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSL 319 (558)
T ss_pred CCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhh
Confidence 899999999999999998877 788999999987643 8899999999999999999999998887653 234567899
Q ss_pred HHHHHHHHHHH
Q psy2417 374 KRLMFNMAMGS 384 (391)
Q Consensus 374 r~~~~gga~~~ 384 (391)
|.+++||+...
T Consensus 320 r~i~~~G~~~~ 330 (558)
T PRK12583 320 RTGIMAGAPCP 330 (558)
T ss_pred eEEEecCCCCC
Confidence 99999987553
No 67
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.6e-34 Score=289.03 Aligned_cols=287 Identities=23% Similarity=0.302 Sum_probs=229.6
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|++.++++|+++|+.+.+. .+.+||+||.++++++|.+|.+.|+++|++|+++++|++++++++|||+
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 89 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYRDQ----GLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATA 89 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEcCC----CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 345899999999999999999988542 2689999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch----hHHHhhcc---------------cCccEEEEecCcchH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC----NQIIDRAP---------------RCLKKIISIREVRMA 221 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~----~~~~~~~~---------------~~l~~ii~~~~~~~~ 221 (391)
++|++++|++|..+.+++.++++++++++++++..... ..+.+... ...+.++.++...
T Consensus 90 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (559)
T PRK08315 90 KIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK-- 167 (559)
T ss_pred HhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC--
Confidence 99999999999999999999999999999999875311 11111000 0233444443311
Q ss_pred HHHHHhhCCceEEeHHHHHHhhhccC-----CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCC
Q psy2417 222 TMQRARSRAIEIIRFDEIERVGAQKM-----FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHR 296 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~ 296 (391)
......++++........ .......++++++|+|||||||.||||.++|+++...+......++
T Consensus 168 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--- 236 (559)
T PRK08315 168 --------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMK--- 236 (559)
T ss_pred --------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcC---
Confidence 112345555543321110 0112345788999999999999999999999999998888877777
Q ss_pred CCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchh
Q psy2417 297 PKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSF 372 (391)
Q Consensus 297 ~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~s 372 (391)
+.++|+++..+|++|.+++... +.++..|+++++... ++..+++.+.++++|+++++|.++..+.... ....++++
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~ 316 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSS 316 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchh
Confidence 8999999999999999998776 789999999986543 8999999999999999999999998887653 33456789
Q ss_pred HHHHHHHHHHHH
Q psy2417 373 IKRLMFNMAMGS 384 (391)
Q Consensus 373 lr~~~~gga~~~ 384 (391)
||.+++||+...
T Consensus 317 lr~~~~~G~~~~ 328 (559)
T PRK08315 317 LRTGIMAGSPCP 328 (559)
T ss_pred hheeEecCCCCC
Confidence 999999987654
No 68
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-34 Score=294.87 Aligned_cols=277 Identities=18% Similarity=0.176 Sum_probs=217.3
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeec---CCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQN---ISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQ 157 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~---~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~l 157 (391)
...++.++|+++++.+|+++|+.+.+. .++.++.+||+||+++++++|++|.+. +++|++|+|+++|+++|++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 446899999999999999999987542 122357899999999999999999987 8999999999999999999999
Q ss_pred HHHhcCCeEEEc-cCCCC--HHHHHHHHHhcCccEEEEcCCcchhHHHh---hccc-CccEEEEecCcchHHHHHHhhCC
Q psy2417 158 GAYCYSMIIVAL-YDTLG--PDACAFIINQAEISVLIVDDDSKCNQIID---RAPR-CLKKIISIREVRMATMQRARSRA 230 (391)
Q Consensus 158 A~~~~G~~~vpl-~~~~~--~~~l~~il~~~~~~~vi~~~~~~~~~~~~---~~~~-~l~~ii~~~~~~~~~~~~~~~~~ 230 (391)
||+++|+++||+ ++..+ .+++.+++++++++++|++... ...+.+ ..+. ....++.++....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 166 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDS-AEGVRKFFRARPAKERPRVIAVDAVPD---------- 166 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHH-HHHHHHHHhhccccccceEEEcccccc----------
Confidence 999999999999 55554 6899999999999999998752 222211 1110 1123333322100
Q ss_pred ceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChH
Q psy2417 231 IEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 231 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 310 (391)
.. ..........++++++|+|||||||.||||+++|+++.+.+......++ +..+|++++++|++
T Consensus 167 -----------~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---~~~~d~~l~~~Pl~ 231 (631)
T PRK07769 167 -----------EV-GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALE---GQEGDRGVSWLPFF 231 (631)
T ss_pred -----------cc-ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcC---CCCcceEEEeCCCc
Confidence 00 0000112346799999999999999999999999999988887777776 88999999999999
Q ss_pred HHHHHHHHHHHHHhCcEEEEeCC-----CHHhHHHHHHhcCC---cEEecChHHHHHHHHH---HH---HhcCchhHHHH
Q psy2417 311 HMLERTCESAMFLVGGSIGYYSG-----DIKNLTEDMKTLKP---TIMPAVPRLLNRMYDK---VM---AQIRPSFIKRL 376 (391)
Q Consensus 311 h~~g~~~~~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~---t~~~~~P~~l~~l~~~---~~---~~~~~~slr~~ 376 (391)
|++|+...+.+++.|+++++.+. ++..+++.+.++++ |++..+|.++..+... .. ...++++||.+
T Consensus 232 h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~ 311 (631)
T PRK07769 232 HDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGL 311 (631)
T ss_pred CchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeE
Confidence 99999888888889999998742 78899999999886 7899999988776643 11 13567899999
Q ss_pred HHHHHHHH
Q psy2417 377 MFNMAMGS 384 (391)
Q Consensus 377 ~~gga~~~ 384 (391)
++||+...
T Consensus 312 ~~gg~~l~ 319 (631)
T PRK07769 312 LNGSEPVS 319 (631)
T ss_pred EeccCCCC
Confidence 99998653
No 69
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-34 Score=288.96 Aligned_cols=263 Identities=19% Similarity=0.253 Sum_probs=213.8
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...|+.++|.+.++++|+++|+++.+ +.+||+||.++++++|.+|.+.|+++|++|+|+++|+++++++++||+
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~ 108 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFED------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLA 108 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeCC------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 45689999999999999999999866 789999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
++|++++|+++.++.+++.+++++++++++|++... ...+.+.... ....++..+..... ....+.+
T Consensus 109 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 177 (600)
T PRK08279 109 KLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEEL-VEAFEEARADLARPPRLWVAGGDTLD----------DPEGYED 177 (600)
T ss_pred hcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHH-HHHHHHHhhhhcccceEEEecCcccc----------ccccHHH
Confidence 999999999999999999999999999999998752 2222221111 11223333221100 0122333
Q ss_pred HHHhhhccC----CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 239 IERVGAQKM----FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 239 l~~~~~~~~----~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
+........ .......++++++|+|||||||.||||+++|+++.+++.+....++ +.++|++++.+|++|.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---l~~~d~~l~~~pl~h~~g 254 (600)
T PRK08279 178 LAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLR---LTPDDVLYCCLPLYHNTG 254 (600)
T ss_pred HhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcC---CCCCcEEEEecCchhhhh
Confidence 332221111 1112345789999999999999999999999999999988888777 899999999999999999
Q ss_pred HHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 315 RTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 315 ~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
+... +.++..|+++++.+. ++..+++.+.++++|++.++|++++.+.+.
T Consensus 255 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~ 305 (600)
T PRK08279 255 GTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQ 305 (600)
T ss_pred HHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhC
Confidence 9877 567788888888765 899999999999999999999999988765
No 70
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-34 Score=290.42 Aligned_cols=288 Identities=18% Similarity=0.189 Sum_probs=219.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...++.++|++.++++|+++|+.+.+. .+.+||+||.++++++|++|.+.|+++|++|+|+++|+++++++++||
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 88 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVTAD----RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAA 88 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEecCC----CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 4566899999999999999999987542 257999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+++|++++|+++.++.+++.+++++++++++|++... ...............+.+...... ..+.....+...
T Consensus 89 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 161 (534)
T PRK05852 89 SRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADG-PHDRAEPTTRWWPLTVNVGGDSGP------SGGTLSVHLDAA 161 (534)
T ss_pred HHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCC-cchhccccccccceeeeecccccc------cccccccccccc
Confidence 9999999999999999999999999999999998642 111111000011111111110000 000000011100
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE- 318 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~- 318 (391)
.. ............++.++|+|||||||.||||+++|+++.+.+......+. +..+|++++.+|++|.+++...
T Consensus 162 ~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~p~~~~~g~~~~~ 236 (534)
T PRK05852 162 TE--PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYR---LSPRDATVAVMPLYHGHGLIAAL 236 (534)
T ss_pred cC--CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC---CCCcceEEEecCcchhHHHHHHH
Confidence 00 00000111123578899999999999999999999999998888888777 8899999999999999999876
Q ss_pred HHHHHhCcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH---hcCchhHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA---QIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~---~~~~~slr~~~~gga~~ 383 (391)
+.+++.|+++++.+. ++..+++.++++++|+++++|.++..+.+.... ..+.+++|.++++|+..
T Consensus 237 ~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~ 307 (534)
T PRK05852 237 LATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPL 307 (534)
T ss_pred HHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCC
Confidence 788999999888542 788999999999999999999999999876332 23456888888777654
No 71
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-34 Score=288.90 Aligned_cols=284 Identities=19% Similarity=0.261 Sum_probs=223.6
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.++|...++++|+++|+.+.+ +.+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~ 78 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWGD------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAF 78 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEECC------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35679999999999999999998865 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDE 238 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
++|++++|+++.++.+++.++++++++++++++.... ...+..... ....++.++... ....+++
T Consensus 79 ~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~ 145 (528)
T PRK07470 79 RLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP-DLTHVVAIGGAR------------AGLDYEA 145 (528)
T ss_pred hCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC-cCceEEEeCCCc------------ccccHHH
Confidence 9999999999999999999999999999999987621 111111111 344555554321 1234555
Q ss_pred HHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 239 IERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
+...............++++++|+|||||||.||||+++|+++...+......... .+..+|+++..+|++|++++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~ 224 (528)
T PRK07470 146 LVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMP-GTTEQDASLVVAPLSHGAGIHQL 224 (528)
T ss_pred HHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhcc-CCCcccEEEEeccchhHHHHHHH
Confidence 54332211122234567899999999999999999999999998665543332210 16788999999999999998754
Q ss_pred HHHHHhCcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~k 385 (391)
+ .++.|+++++.+. ++..+++.++++++|++.++|++++.+.+... ...+++++|.+++||+....
T Consensus 225 ~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~ 294 (528)
T PRK07470 225 C-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYR 294 (528)
T ss_pred H-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCH
Confidence 4 6778888877643 88999999999999999999999999877532 34567789999999876543
No 72
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.7e-34 Score=290.74 Aligned_cols=291 Identities=18% Similarity=0.190 Sum_probs=219.8
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.+.|.+.++.+|+++|+.+.+ +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~ 93 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMA 93 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhC
Confidence 468999999999999999998855 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHH---Hhhcc----c--CccEEEEecCcchHHHHHHhhCCceE
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQI---IDRAP----R--CLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~---~~~~~----~--~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
|++++|+++.++.+++.++++++++++++++... .+.. ..... . ....++.++.................
T Consensus 94 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
T PLN02479 94 GAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEF-FTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGA 172 (567)
T ss_pred CcEEEEeccccCHHHHHHHHhhcCceEEEEchhh-hhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCc
Confidence 9999999999999999999999999999998753 2221 11111 0 11234444321100000000001123
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHML 313 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 313 (391)
..|+++................++.++|+|||||||.||||+++|+++..........+. +..+|++++.+|++|.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~h~~ 249 (567)
T PLN02479 173 IEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWG---MNEGAVYLWTLPMFHCN 249 (567)
T ss_pred ccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcC---CCCCCEEEEecchhhhh
Confidence 456665543221111111223457788999999999999999999998776655555565 78899999999999999
Q ss_pred HHHHHH-HHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHh--cCchhHHHHHHHHHHH
Q psy2417 314 ERTCES-AMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQ--IRPSFIKRLMFNMAMG 383 (391)
Q Consensus 314 g~~~~~-~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~~~~slr~~~~gga~~ 383 (391)
++...+ ..++.|.++++...++..+++.+++++||++..+|.++..|.+..... .+++++|.++++|+..
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~ 322 (567)
T PLN02479 250 GWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAP 322 (567)
T ss_pred hHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCC
Confidence 987664 456667776665559999999999999999999999999998764322 2456888888887654
No 73
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.8e-36 Score=266.97 Aligned_cols=286 Identities=20% Similarity=0.195 Sum_probs=245.0
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...|+.+++.+++.++||++|+++.+ +.+||+||+++++++|.+|+++|+++||+|.+-++|..+|.+++||++
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~~------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALl 99 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDGE------RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALL 99 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecCc------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHH
Confidence 46799999999999999999999988 679999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCc-------chhHHHhhcccCccEEEEecCcchHHHHHHhhCCceE
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDS-------KCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~-------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
+.|..+|.--|+....+|.+..+.++++.+|++... ....++...+ +++.+++.++....
T Consensus 100 rlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~-tlr~v~v~ge~~~~------------ 166 (542)
T COG1021 100 RLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP-TLRHVIVAGEAEHP------------ 166 (542)
T ss_pred HcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC-cceEEEEccCCCCc------------
Confidence 999999999999999999999999999999987651 1222333333 78888887553211
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHML 313 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 313 (391)
...+...........+..+.+++++|+...+-||||.||-+..||.....++....+.++ ++.++++|+.+|.+|.|
T Consensus 167 ~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~---~~~~tvyL~~LP~AHNf 243 (542)
T COG1021 167 SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICG---FDQQTVYLCALPAAHNF 243 (542)
T ss_pred chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhC---cCccceEEEecccccCC
Confidence 112222222222222335567889999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHH--HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH-HHHhcCchhHHHHHHHHHHHHHHHh
Q psy2417 314 ERTCE--SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK-VMAQIRPSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 314 g~~~~--~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~~slr~~~~gga~~~k~~~ 388 (391)
.+..- ++.++.||++|+.+. +|+.-+..|++++||+..+||.+...+++. .....+++|||.+-+|||..+.+..
T Consensus 244 plssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~A 322 (542)
T COG1021 244 PLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLA 322 (542)
T ss_pred CCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHH
Confidence 99866 899999999999876 999999999999999999999999999998 5678899999999999998876654
No 74
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-34 Score=285.85 Aligned_cols=263 Identities=15% Similarity=0.162 Sum_probs=211.8
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
++.+.|+++++++||++|+.+.+ ..+||.||.++++++|++|.+.|. +|++|+|+++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G 74 (487)
T PRK07638 2 GITKEYKKHASLQPNKIAIKEND------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAG 74 (487)
T ss_pred ChHHHHHHHHHhCCCCeEEecCC------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 67899999999999999998876 689999999999999999999985 79999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhh
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVG 243 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (391)
++++|+++.++++++.++++.+++++++++... ...+.. ....++.++. +.+.....
T Consensus 75 ~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~-~~~~~~----~~~~~~~~~~------------------~~~~~~~~ 131 (487)
T PRK07638 75 WTCVPLDIKWKQDELKERLAISNADMIVTERYK-LNDLPD----EEGRVIEIDE------------------WKRMIEKY 131 (487)
T ss_pred eEEEecCccCCHHHHHHHHHhCCCCEEEEeccc-ccchhh----ccceEEEehh------------------hhhhhhhc
Confidence 999999999999999999999999999998752 211111 0112222221 11111111
Q ss_pred hccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHH
Q psy2417 244 AQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFL 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~ 323 (391)
.. ...+.....+++++|+|||||||.||||+++|++++..+......++ +..+|+++...|++|..++...+.+++
T Consensus 132 ~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 132 LP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFH---MKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred cc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC---cCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 11 01111223567899999999999999999999999998887777777 889999999999999998877789999
Q ss_pred hCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy2417 324 VGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 324 ~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~ 383 (391)
.|+++++.+. ++..+++.++++++|++.++|+++..+.+.. .. ..+.++++++|+..
T Consensus 208 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~-~~~~~~~~~~G~~l 265 (487)
T PRK07638 208 VGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN--RV-IENKMKIISSGAKW 265 (487)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc--Cc-CCceeEEEEcCCCC
Confidence 9999999866 8999999999999999999999999998751 12 22444556666543
No 75
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-34 Score=287.93 Aligned_cols=293 Identities=19% Similarity=0.212 Sum_probs=226.7
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...|+.++|++.++++||+++++... ++..+.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~ 85 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRSV--EGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIM 85 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeec--cCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 34699999999999999999998532 2235789999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHH---hhcccCccEEEEecCcchHHHHHHhhCCceEEeHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQII---DRAPRCLKKIISIREVRMATMQRARSRAIEIIRFD 237 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~---~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
++|++++|+++.++.+++.++++.+++++++++... ...+. .... .++.++.+.+.... ..........|+
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~ 159 (542)
T PRK06018 86 GIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTF-VPILEKIADKLP-SVERYVVLTDAAHM----PQTTLKNAVAYE 159 (542)
T ss_pred hcCeEeeccccccCHHHHHHHHhccCCCEEEEcccc-HHHHHHHHhhCC-CccEEEEecccccc----cccCccccccHH
Confidence 999999999999999999999999999999998753 22222 2222 44555554432100 000011233455
Q ss_pred HHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHH-HHH-HHHHHhhcCCCCCCCCEEEEcCChHHHHHH
Q psy2417 238 EIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVI-AAI-SAALLQLSDHRPKYSDVLISFLPLAHMLER 315 (391)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~-~~~-~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 315 (391)
++....... .......++++++|+|||||||.||||++||++.+ ... ......++ +..+|+++..+|++|.+++
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~p~~h~~~~ 235 (542)
T PRK06018 160 EWIAEADGD-FAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALG---TSAADTMLPVVPLFHANSW 235 (542)
T ss_pred HHhccCCcc-cCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcC---CCCCCEEEEecCHHHHhhh
Confidence 554322111 11123456789999999999999999999999743 222 22334455 7889999999999999998
Q ss_pred HHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHH
Q psy2417 316 TCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 316 ~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~k 385 (391)
...+.++..|+++++... ++..+++.+++++||++.++|+++..+.+... ...+++++|.+++||+....
T Consensus 236 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~ 308 (542)
T PRK06018 236 GIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPR 308 (542)
T ss_pred HHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCH
Confidence 877888999999998643 78899999999999999999999999987632 34466789999888876643
No 76
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-34 Score=289.17 Aligned_cols=282 Identities=20% Similarity=0.213 Sum_probs=228.4
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.+.+++.++.+|+++|+.+.+ +.+||.||.++++++|.+|.+.|+++|++|+|+++|+++|+++++||+
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~ 88 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFLG------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAAN 88 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 45689999999999999999999876 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcc---cCccEEEEecCcchHHHHHHhhCCceEEeHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAP---RCLKKIISIREVRMATMQRARSRAIEIIRFD 237 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~---~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
++|++++|+++..+.+++.++++++++++++++... . ....... ..++.++.+++.. ......++
T Consensus 89 ~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 156 (542)
T PRK07786 89 MLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAAL-A-PVATAVRDIVPLLSTVVVAGGSS----------DDSVLGYE 156 (542)
T ss_pred HcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccch-H-HHHHHhhhccCccceEEEecCCC----------cccccCHH
Confidence 999999999999999999999999999999998752 2 2222111 1445566554321 11234566
Q ss_pred HHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCC-CCCCEEEEcCChHHHHHHH
Q psy2417 238 EIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRP-KYSDVLISFLPLAHMLERT 316 (391)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~ 316 (391)
++........ .......+++++|+|||||||.||||+++|+++...+......++ + ..++++++.+|++|.+|+.
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~ 232 (542)
T PRK07786 157 DLLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNG---ADINSDVGFVGVPLFHIAGIG 232 (542)
T ss_pred HHhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcC---CCCCCceEEEecchHHHHHHH
Confidence 6544322211 222345678999999999999999999999999988887777665 5 6789999999999999998
Q ss_pred HHHHHHHhCcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy2417 317 CESAMFLVGGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 317 ~~~~~L~~G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~ 384 (391)
..+.++..|+++++.+. ++..+++.++++++|.++++|+++..+...........++|.+++||+...
T Consensus 233 ~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~ 303 (542)
T PRK07786 233 SMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPAS 303 (542)
T ss_pred HHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCC
Confidence 77999999999998652 899999999999999999999999999875332222236777777777553
No 77
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.9e-34 Score=289.81 Aligned_cols=278 Identities=19% Similarity=0.211 Sum_probs=212.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecC---CCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNI---SRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITE 156 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~---~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~ 156 (391)
+...|+.++++++++.+|+++|+.+.+.. ++.++.+||+||.++++++|++|.+. +++|++|+|+++|+++|++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~ 109 (612)
T PRK12476 31 PPGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGF 109 (612)
T ss_pred CccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHH
Confidence 34568999999999999999999875421 12346899999999999999999987 999999999999999999999
Q ss_pred HHHHhcCCeEEEc-cCCCC--HHHHHHHHHhcCccEEEEcCCcchhHHHhh---ccc-CccEEEEecCcchHHHHHHhhC
Q psy2417 157 QGAYCYSMIIVAL-YDTLG--PDACAFIINQAEISVLIVDDDSKCNQIIDR---APR-CLKKIISIREVRMATMQRARSR 229 (391)
Q Consensus 157 lA~~~~G~~~vpl-~~~~~--~~~l~~il~~~~~~~vi~~~~~~~~~~~~~---~~~-~l~~ii~~~~~~~~~~~~~~~~ 229 (391)
+||+++|+++||+ ++.++ .+++.+++++++++++|++... ...+... ... ....++.++...
T Consensus 110 lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 178 (612)
T PRK12476 110 FAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAA-AEAVEGFLRNLPRLRRPRVIAIDAIP---------- 178 (612)
T ss_pred HHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHH-HHHHHHHHhhcccccCceEEEecccc----------
Confidence 9999999999999 67776 8899999999999999998752 2222111 110 112344443210
Q ss_pred CceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCCh
Q psy2417 230 AIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPL 309 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl 309 (391)
..... ........++++++|+|||||||.||||+++|+++.+++......+.. +.+++++++++|+
T Consensus 179 -----------~~~~~-~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~~~~~l~~~Pl 244 (612)
T PRK12476 179 -----------DSAGE-SFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDL--LDRNTHGVSWLPL 244 (612)
T ss_pred -----------ccccc-cccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhcc--CCCCceEEEeCCc
Confidence 00000 001123467899999999999999999999999998877665544431 4678999999999
Q ss_pred HHHHHHHHHHHHHHhCcEEEEeCC-----CHHhHHHHHH--hcCCcEEecChHHHHHHHHHH-----HHhcCchhHHHHH
Q psy2417 310 AHMLERTCESAMFLVGGSIGYYSG-----DIKNLTEDMK--TLKPTIMPAVPRLLNRMYDKV-----MAQIRPSFIKRLM 377 (391)
Q Consensus 310 ~h~~g~~~~~~~L~~G~~vv~~~~-----~~~~l~~~i~--~~~~t~~~~~P~~l~~l~~~~-----~~~~~~~slr~~~ 377 (391)
+|++|+...+.+++.|+++++... ++..+++.+. ++++|+++.+|.++..+.... ....+++++| ++
T Consensus 245 ~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~ 323 (612)
T PRK12476 245 YHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LI 323 (612)
T ss_pred ccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EE
Confidence 999999887766667777666542 7889999995 589999999999988877641 1244678899 88
Q ss_pred HHHHHHH
Q psy2417 378 FNMAMGS 384 (391)
Q Consensus 378 ~gga~~~ 384 (391)
+||+...
T Consensus 324 ~gg~~~~ 330 (612)
T PRK12476 324 IGSEPVS 330 (612)
T ss_pred ecccCCC
Confidence 9887653
No 78
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-34 Score=283.74 Aligned_cols=253 Identities=19% Similarity=0.218 Sum_probs=207.4
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGL-GVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
...++.++|++.+. ++++|+.+.+ +++||+||.++++++|++|.++ |++++++|+++++|+++|+++++||
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~~------~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~ 74 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFED------SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAA 74 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEECC------cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 45579999988875 7899998866 7899999999999999999997 8999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+++|++++|+++.++.+++.++++++++++++++... . ..++.....+ .++.++. ..|.++
T Consensus 75 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~-~-~~~~~~~~~~-~~~~~~~----------------~~~~~~ 135 (529)
T PRK07867 75 ALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAH-A-ELLDGLDPGV-RVINVDS----------------PAWADE 135 (529)
T ss_pred HhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhH-H-HHHHhhccCc-eEEEecc----------------ccHHHH
Confidence 9999999999999999999999999999999998752 2 2222221122 1222221 113333
Q ss_pred HHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-
Q psy2417 240 ERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE- 318 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~- 318 (391)
...............++++++|+|||||||.||||+++|+++..........++ +..+|+++..+|++|.+++...
T Consensus 136 l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~---~~~~d~~l~~~pl~~~~~~~~~~ 212 (529)
T PRK07867 136 LAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFG---LGPDDVCYVSMPLFHSNAVMAGW 212 (529)
T ss_pred hcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhC---CCcccEEEEecchhHHHHHHHHH
Confidence 221111111223356789999999999999999999999999988888877777 8899999999999999999876
Q ss_pred HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
+.++..|+++++.+. ++..+++.++++++|++.++|+.+..+...
T Consensus 213 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~ 258 (529)
T PRK07867 213 AVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLAT 258 (529)
T ss_pred HHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhC
Confidence 678999999998765 899999999999999999999999988764
No 79
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=9e-34 Score=281.55 Aligned_cols=276 Identities=22% Similarity=0.305 Sum_probs=222.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
+.++.+++..++ .+|+++|+.+.+. +.+||+||.++++++|.+|+++|+++|++|+++++|+++++++++||++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~ 75 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLR 75 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 457999999999 9999999987553 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
+|++++|+++.++.+++..+++.+++++++++... ...+...... ..+.++.++..... .+.+..
T Consensus 76 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 141 (504)
T PRK07514 76 AGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPAN-FAWLSKIAAAAGAPHVETLDADGTG-------------SLLEAA 141 (504)
T ss_pred cCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccch-hHHHHHhhhccCCceEEEecCCCcc-------------cHHHhh
Confidence 99999999999999999999999999999998753 2222222111 23334544432110 111111
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-H
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-S 319 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~ 319 (391)
.. ...........++++++|+|||||||.||||+++|+++...+......++ +..+|++++.+|++|..++... +
T Consensus 142 ~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~g~~~~~~ 217 (504)
T PRK07514 142 AA-APDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWR---FTPDDVLIHALPIFHTHGLFVATN 217 (504)
T ss_pred hh-cCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhC---CCCccEEEEecchHHHHHHHHHHH
Confidence 11 01111123456899999999999999999999999999999887777777 8899999999999999998765 7
Q ss_pred HHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 320 AMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 320 ~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
.+++.|+++++.+. ++..+++.+ .++|++..+|.++..+.+.. .....++++|.+++||+..
T Consensus 218 ~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~ 281 (504)
T PRK07514 218 VALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPL 281 (504)
T ss_pred HHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCC
Confidence 89999999999876 899999998 47999999999999887652 2344567899999988764
No 80
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-33 Score=282.27 Aligned_cols=277 Identities=21% Similarity=0.237 Sum_probs=225.6
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..|+.++|.++++++|+++|+.+.+ +.+||+||.+++++++..|.+.|+++|++|+++++|+++++++++||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~ 84 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLGD------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQL 84 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEECC------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 4589999999999999999999876 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
.|++++|++|..+.+++.++++.++++.++++.......+...... .+..++.++.... +.++
T Consensus 85 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 149 (524)
T PRK06188 85 AGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPD---------------GVDL 149 (524)
T ss_pred hCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccc---------------hhhH
Confidence 9999999999999999999999999999999875322222211111 3344555443211 1111
Q ss_pred HHhhhcc--CCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH
Q psy2417 240 ERVGAQK--MFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC 317 (391)
Q Consensus 240 ~~~~~~~--~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 317 (391)
....... ........++++++|+|||||||.||||+++|.++.+.+......++ +..+|++++.+|++|.+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~---~~~~~~~l~~~pl~~~~g~~- 225 (524)
T PRK06188 150 LAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWE---WPADPRFLMCTPLSHAGGAF- 225 (524)
T ss_pred HHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC---CCcCcEEEEecCchhhhhHH-
Confidence 1111100 00111234567999999999999999999999999999888888877 88999999999999998875
Q ss_pred HHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 318 ESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 318 ~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
.+.+++.|+++++.+. ++..+++.++++++|++..+|+++..+++.. ....+++++|.+++||+..
T Consensus 226 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~ 293 (524)
T PRK06188 226 FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPM 293 (524)
T ss_pred HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCC
Confidence 4788999999999876 8999999999999999999999999998763 3345677999998888644
No 81
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-33 Score=281.50 Aligned_cols=285 Identities=18% Similarity=0.255 Sum_probs=222.2
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
|+.++|++.++++||++|+.+.+ +.+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++||+++|
T Consensus 4 ~l~~~~~~~a~~~p~~~a~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G 77 (533)
T PRK07798 4 NIADLFEAVADAVPDRVALVCGD------RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKAR 77 (533)
T ss_pred cHHHHHHHHHHhCCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 78999999999999999999866 789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
++++|+++.++.+++.++++++++++++++... ...+.+.... .++.++.++..... ......+.++++..
T Consensus 78 ~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 150 (533)
T PRK07798 78 AVPVNVNYRYVEDELRYLLDDSDAVALVYEREF-APRVAEVLPRLPKLRTLVVVEDGSGN------DLLPGAVDYEDALA 150 (533)
T ss_pred eEEEecCcCCCHHHHHHHHhhcCCCEEEEchhh-HHHHHHHhccCCCccEEEEecCCccc------ccCCccccHHHHHh
Confidence 999999999999999999999999999998752 3333322221 44566666543211 00112446666654
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC------CC------CCCCEEEEcCCh
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH------RP------KYSDVLISFLPL 309 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~------~~------~~~d~~l~~~pl 309 (391)
..... ........+.++|+|||||||.||||+++|+++...+......+... .+ ..+++++..+|+
T Consensus 151 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 228 (533)
T PRK07798 151 AGSPE--RDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPL 228 (533)
T ss_pred ccCCc--CCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecch
Confidence 32221 11112334567999999999999999999999987655433322100 01 567899999999
Q ss_pred HHHHHHHHHHHHHHhCcEEEEeC--C-CHHhHHHHHHhcCCcEEecChHHHHH-HHHHH--HHhcCchhHHHHHHHHHHH
Q psy2417 310 AHMLERTCESAMFLVGGSIGYYS--G-DIKNLTEDMKTLKPTIMPAVPRLLNR-MYDKV--MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 310 ~h~~g~~~~~~~L~~G~~vv~~~--~-~~~~l~~~i~~~~~t~~~~~P~~l~~-l~~~~--~~~~~~~slr~~~~gga~~ 383 (391)
+|++++...+.+|+.|+++++.+ . ++..+++.++++++|.+.++|..+.. +.+.. ....+++++|.+++||+..
T Consensus 229 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~ 308 (533)
T PRK07798 229 MHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALF 308 (533)
T ss_pred hhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCC
Confidence 99999998899999999999987 4 89999999999999999999876644 33332 2334567899888888755
No 82
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-33 Score=280.56 Aligned_cols=274 Identities=22% Similarity=0.269 Sum_probs=222.1
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.++|+++++.+|+++|+.+.+ +.+||.||.++++++|.+|.+.|++++++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~------~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRD------QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYL 75 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECC------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 468899999999999999998876 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHh
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERV 242 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 242 (391)
|++++|+++.++.+++.++++++++++++++... ..... ....++.++..... .+..+..
T Consensus 76 G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~--~~~~~----~~~~~~~~~~~~~~-------------~~~~~~~- 135 (497)
T PRK06145 76 GAVFLPINYRLAADEVAYILGDAGAKLLLVDEEF--DAIVA----LETPKIVIDAAAQA-------------DSRRLAQ- 135 (497)
T ss_pred CcEEEecccccCHHHHHHHHHhcCCcEEEEccch--hhhhh----cccceEEecCcccc-------------hhHHHhc-
Confidence 9999999999999999999999999999998753 11111 01122333321100 0111111
Q ss_pred hhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHH
Q psy2417 243 GAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAM 321 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~ 321 (391)
............++++++|+|||||||.||||+++|+++..........++ +..+|+++..+|++|.+++... +.+
T Consensus 136 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~~ 212 (497)
T PRK06145 136 GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALG---LTASERLLVVGPLYHVGAFDLPGIAV 212 (497)
T ss_pred cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC---CCCCcEEEEecCchhHhHHHHHHHHH
Confidence 111111123356789999999999999999999999999877666666666 8899999999999999999766 788
Q ss_pred HHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHH
Q psy2417 322 FLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 322 L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~k 385 (391)
++.|+++++.+. ++..+++.++++++|++.++|+++..++... ....+++++|.+++||+...+
T Consensus 213 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~ 278 (497)
T PRK06145 213 LWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPE 278 (497)
T ss_pred HhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCH
Confidence 999999998776 9999999999999999999999999998753 234456789999999876644
No 83
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.2e-33 Score=283.45 Aligned_cols=286 Identities=20% Similarity=0.258 Sum_probs=221.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...|+.+++.+.++.+|+++|+.+... .+.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||
T Consensus 25 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 100 (546)
T PLN02330 25 PDKLTLPDFVLQDAELYADKVAFVEAVT----GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGI 100 (546)
T ss_pred CCCCcHHHHHhhhhhcCCCccEEEecCC----CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 3457899999999999999999986421 168999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+++|++++|+++.++.+++.++++++++++++++... ...+ ... .+ .++.++... ......|+++
T Consensus 101 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~-~~~~-~~~--~~-~~i~~~~~~----------~~~~~~~~~~ 165 (546)
T PLN02330 101 MAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTN-YGKV-KGL--GL-PVIVLGEEK----------IEGAVNWKEL 165 (546)
T ss_pred HHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccch-hhhH-hhc--CC-cEEEecCCC----------CCCcccHHHH
Confidence 9999999999999999999999999999999998763 2222 111 12 234443321 0112345665
Q ss_pred HHhhhccCC--CCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH
Q psy2417 240 ERVGAQKMF--EEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC 317 (391)
Q Consensus 240 ~~~~~~~~~--~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 317 (391)
......... ......++++++|+|||||||.||||+++|+++...+......... .....++.+..+|++|.+++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~ 244 (546)
T PLN02330 166 LEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGP-EMIGQVVTLGLIPFFHIYGITG 244 (546)
T ss_pred HhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCc-cccCceEEEEecChHHHHHHHH
Confidence 543221111 1223457899999999999999999999999998876533222210 1234568999999999999876
Q ss_pred H-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCch--hHHHHHHHHHHHHH
Q psy2417 318 E-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPS--FIKRLMFNMAMGSK 385 (391)
Q Consensus 318 ~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~--slr~~~~gga~~~k 385 (391)
. +.+|..|+++++.+. ++..+++.++++++|++.++|.++..+.+.. ..+.++. ++|.+++||+....
T Consensus 245 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~ 317 (546)
T PLN02330 245 ICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAP 317 (546)
T ss_pred HHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCH
Confidence 5 788999999998876 9999999999999999999999999998752 2233333 46788888876543
No 84
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=9.1e-34 Score=285.06 Aligned_cols=282 Identities=20% Similarity=0.242 Sum_probs=214.8
Q ss_pred HHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 86 YDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 86 ~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
..+|.+ +.+|+++|+++... ...+||+||.++++++|++|.+ .|+++|++|+++++|+++|++++|||+++|+
T Consensus 44 ~~l~~~--~~~~~~~a~~~~~~----~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 44 SFIFSH--HNHNGDTALIDSST----GFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred HHHhcC--cccCCCCEEEECCC----CCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 344544 67899999987542 1379999999999999999999 9999999999999999999999999999999
Q ss_pred eEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhh
Q psy2417 165 IIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGA 244 (391)
Q Consensus 165 ~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 244 (391)
+++|++|.++.+++.++++++++++++++.+. ...+.. . ... ++.++..... .........|+++.....
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~-~--~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 187 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPEN-VEKLSP-L--GVP-VIGVPENYDF-----DSKRIEFPKFYELIKEDF 187 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHH-HHHHHh-c--CCc-EEecCccccc-----ccCccCcccHHHHhhcCC
Confidence 99999999999999999999999999998752 222221 1 112 2222211000 000112234555443322
Q ss_pred ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC--CCCCCCEEEEcCChHHHHHHHHH-HHH
Q psy2417 245 QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH--RPKYSDVLISFLPLAHMLERTCE-SAM 321 (391)
Q Consensus 245 ~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~~~~-~~~ 321 (391)
... ......++++++|+|||||||.||||+++|+++.+.+.......... ....+++++..+|++|.+|+... +.+
T Consensus 188 ~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 188 DFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred ccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 111 12234678999999999999999999999999998876654321100 13457899999999999999876 677
Q ss_pred HHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH--HhcCchhHHHHHHHHHHHH
Q psy2417 322 FLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM--AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 322 L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~~slr~~~~gga~~~ 384 (391)
+..|+++++.+. ++..+++.|+++++|+++++|.++..|.+... ...+++++|.+++||+...
T Consensus 267 l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~ 332 (560)
T PLN02574 267 LSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLS 332 (560)
T ss_pred HhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCC
Confidence 888999998876 99999999999999999999999999987632 3456789999999998654
No 85
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-33 Score=278.73 Aligned_cols=251 Identities=19% Similarity=0.230 Sum_probs=204.8
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
.|+.++|.+++ .|+++|+.+.+ ..+||+||.++++++|.+|.++|+ ++|++|+++++|+++|+++++||++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~------~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~ 74 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGD------RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAAL 74 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHh
Confidence 47888888764 79999998866 689999999999999999999999 7999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
+|++++|++|.++.+++.++++++++++++++... ...+.+.....++ ++.++.. .+.++..
T Consensus 75 ~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~-~~~~~~~~~~~~~-~i~~~~~----------------~~~~~~~ 136 (540)
T PRK13388 75 GGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEH-RPLLDGLDLPGVR-VLDVDTP----------------AYAELVA 136 (540)
T ss_pred CCCEEEEecccCChHHHHHHHHhcCCCEEEEChhh-hHHHHhhcccCce-EEEccch----------------hhhhhhc
Confidence 99999999999999999999999999999998752 2222211011222 2333221 1222221
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HH
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SA 320 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~ 320 (391)
.... ..+.....++++++|+|||||||.||||+++|+++..........++ +..+|+++..+|++|.+++... +.
T Consensus 137 ~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~~~~~~~~~ 212 (540)
T PRK13388 137 AAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFG---LTRDDVCYVSMPLFHSNAVMAGWAP 212 (540)
T ss_pred cccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhC---CCCCCEEEEeeCchhhcchHHHHHH
Confidence 1111 11112346799999999999999999999999999988888777777 8899999999999999998776 56
Q ss_pred HHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 321 MFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 321 ~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
+|..|+++++.+. ++..+++.++++++|++..+|..+..+...
T Consensus 213 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~ 256 (540)
T PRK13388 213 AVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILAT 256 (540)
T ss_pred HHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhC
Confidence 8999999998765 899999999999999999999999888754
No 86
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3e-33 Score=280.24 Aligned_cols=295 Identities=23% Similarity=0.267 Sum_probs=222.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..|+.++|++.++.+|+++|+.+.+ +.+||.||.++++++|.+|.++|+++|++|+++++|+++++++++||++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFRD------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEECC------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 4589999999999999999998866 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcch-hHHHhhccc-CccEEEEecCcchHH--HHHH-hhCCceEEeH
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKC-NQIIDRAPR-CLKKIISIREVRMAT--MQRA-RSRAIEIIRF 236 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~-~~~~~~~~~-~l~~ii~~~~~~~~~--~~~~-~~~~~~~~~~ 236 (391)
+|++++|++|.++.+++.+++++++++.++++..... ..+.+.... .+..++.++...... .... .........+
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccH
Confidence 9999999999999999999999999999999863111 111111111 233444443211000 0000 0011234456
Q ss_pred HHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC---CCCCCCCEEEEcCChHHHH
Q psy2417 237 DEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD---HRPKYSDVLISFLPLAHML 313 (391)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~ 313 (391)
+++....... .......++++++|+|||||||.||||+++|+++....... ..+.. ......+++++.+|++|.+
T Consensus 174 ~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 174 ADFVKGAAAP-AEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHhcCCCC-CCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHH
Confidence 6655422111 11123467899999999999999999999999998655422 22110 0123457999999999999
Q ss_pred HHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 314 ERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 314 g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
++... +.++..|+++++.+. ++..+++.|.++++|++.++|+++..+.+.. ....+++++|.+++||+...
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~ 325 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLP 325 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCC
Confidence 98876 788999999988765 8999999999999999999999999887642 23345678999999987653
No 87
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6.6e-34 Score=283.89 Aligned_cols=266 Identities=15% Similarity=0.161 Sum_probs=204.2
Q ss_pred HHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 85 LYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 85 l~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
+.+.|+++++++|+++|+.+.+ ++.++++||+||.++++++|.+|.++ ++|++|+|+++|++++++++|||+++|+
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~--~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~ 79 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRE--SGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGA 79 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCC--CCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCC
Confidence 7889999999999999998865 23478999999999999999999988 7999999999999999999999999999
Q ss_pred eEEEccCC--------CCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeH
Q psy2417 165 IIVALYDT--------LGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRF 236 (391)
Q Consensus 165 ~~vpl~~~--------~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+++ +++. ...+++.+++++++++++|++... ...+..... . +.+.+ +
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~-~~~~~~~~~-~----~~~~~------------------~ 134 (525)
T PRK05851 80 AVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSH-LERLRAVDS-S----VTVHD------------------L 134 (525)
T ss_pred CCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHH-HHHHHHhhc-c----ccccc------------------c
Confidence 865 4432 233566678999999999998652 222211110 0 00100 0
Q ss_pred HHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCC-CCCEEEEcCChHHHHHH
Q psy2417 237 DEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPK-YSDVLISFLPLAHMLER 315 (391)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~-~~d~~l~~~pl~h~~g~ 315 (391)
...... ..........+++++||+|||||||.||||+++|+++.+.+......++ +. ++|++++++|++|++++
T Consensus 135 ~~~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~g~ 209 (525)
T PRK05851 135 ATAAHT--NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVG---LDAATDVGCSWLPLYHDMGL 209 (525)
T ss_pred cccccc--cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC---CCCCCCeEEEcCCCccCccH
Confidence 000000 0000112246789999999999999999999999999999888887777 77 89999999999999999
Q ss_pred HHHHHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH--HHhcCchhHHHHHHHHHHHH
Q psy2417 316 TCESAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV--MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 316 ~~~~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~--~~~~~~~slr~~~~gga~~~ 384 (391)
...+.+++.|+++++.+. ++..+++.+.++++|++..+|.++..+.+.. ....++++||.+++||++..
T Consensus 210 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~ 285 (525)
T PRK05851 210 AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVD 285 (525)
T ss_pred HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCC
Confidence 888999999999999762 5778999999999998866555555443322 13456789999999998753
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.5e-33 Score=305.71 Aligned_cols=287 Identities=20% Similarity=0.230 Sum_probs=227.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...++.+.|++.++++|+++|+.+.+. +.+||+||.++++++|++|.+ ++++|++|+++++|+++++++++||
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~ 685 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLAL 685 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHH
Confidence 4457899999999999999999986432 689999999999999999987 4899999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHh-----hcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIID-----RAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~-----~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+++|++++|+++..+.+++.++++++++++++++... .+.+.+ ... ....++.+++...... ...
T Consensus 686 ~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~ 755 (1146)
T PRK08633 686 LLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKF-LEKLKNKGFDLELP-ENVKVIYLEDLKAKIS--------KVD 755 (1146)
T ss_pred HHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHH-HHHHhccCCchhcc-cCceEEEeehhccccc--------hhH
Confidence 9999999999999999999999999999999998642 222221 111 2234444443211000 000
Q ss_pred eHHHHHHhhh-c----cCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCCh
Q psy2417 235 RFDEIERVGA-Q----KMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPL 309 (391)
Q Consensus 235 ~~~~l~~~~~-~----~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl 309 (391)
.+.+...... . .........++|+++|+|||||||.||||+++|+++.+.+......++ +.++|++++.+|+
T Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~ 832 (1146)
T PRK08633 756 KLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFN---LRNDDVILSSLPF 832 (1146)
T ss_pred HHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcC---CCCCCEEEEcCcH
Confidence 1111111000 0 000013356799999999999999999999999999999888877777 8899999999999
Q ss_pred HHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHH
Q psy2417 310 AHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 310 ~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~k 385 (391)
+|.+|+... +.++..|+++++.+. ++..+++.++++++|++.++|++++.+.+.. ..+.+++++|.+++||+....
T Consensus 833 ~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~ 912 (1146)
T PRK08633 833 FHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKP 912 (1146)
T ss_pred HHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCH
Confidence 999999875 889999999998764 8899999999999999999999999988753 345567899999999986543
No 89
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-33 Score=279.95 Aligned_cols=287 Identities=19% Similarity=0.196 Sum_probs=214.2
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.+..++|++.++.+|+++|+.+.+ ..+||+||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 91 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHGD------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMA 91 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECC------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 578899999999999999998865 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHHHHHHhhCCceEEeHHHHHH
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMATMQRARSRAIEIIRFDEIER 241 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (391)
|++++|+++.++.+++.+++++++++.++++... ...+.+.... ....++.++...... .....+....++++..
T Consensus 92 G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 167 (545)
T PRK08162 92 GAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEF-AEVAREALALLPGPKPLVIDVDDPEY---PGGRFIGALDYEAFLA 167 (545)
T ss_pred CcEEeccccccChHHHHHHHHhCCCeEEEEccch-hhHHHHHHhhCCCCceEEEecCcccc---ccCCCcccccHHHHhc
Confidence 9999999999999999999999999999998863 2222221111 111123332211100 0011123345555543
Q ss_pred hhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHH
Q psy2417 242 VGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAM 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~ 321 (391)
..........+.+.+++++|+|||||||.||||+++|+++..........+. +..++++++.+|++|.+++...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~---~~~~~~~l~~~pl~h~~~~~~~~~~ 244 (545)
T PRK08162 168 SGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWG---MPKHPVYLWTLPMFHCNGWCFPWTV 244 (545)
T ss_pred cCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC---CCCCCeeEeccCcHhhhhHHHHHHH
Confidence 3211111112234568999999999999999999999998777666555555 7788999999999999998776544
Q ss_pred HHhCcEEEEeC-CCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-hcCchhHHHHHHHHHH
Q psy2417 322 FLVGGSIGYYS-GDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-QIRPSFIKRLMFNMAM 382 (391)
Q Consensus 322 L~~G~~vv~~~-~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-~~~~~slr~~~~gga~ 382 (391)
.+.|++.++.. .++..+++.++++++|++.++|+++..|.+.... ...+.+.+.++++|+.
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~ 307 (545)
T PRK08162 245 AARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAA 307 (545)
T ss_pred HHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCC
Confidence 44555555544 4999999999999999999999999999875321 2223344444555543
No 90
>KOG1179|consensus
Probab=100.00 E-value=4.6e-33 Score=259.87 Aligned_cols=265 Identities=16% Similarity=0.200 Sum_probs=219.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
....|++++|..+++++|+++|+++.+. .+.+||+|++++++++|+.|...|++.||.|+++++|++||+...|+.
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~----~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGL 149 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGP----FQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGL 149 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCC----CceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhH
Confidence 3467999999999999999999999873 478999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc---CccEEEEecCcchHHHHHHhhCCceEEeH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR---CLKKIISIREVRMATMQRARSRAIEIIRF 236 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+++|++..-|++++..+-+.|-++-++++.+|++.+. ...+.+..+. .--.+..++.... ....
T Consensus 150 aKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el-~~~~~e~~~~l~~~~i~~~~~~~~~~------------~~g~ 216 (649)
T KOG1179|consen 150 AKLGVITAFINTNLRGEPLLHSITVSGARALVVGPEL-LNALEEILPLLIKNGIHVFSLGPTSV------------PDGI 216 (649)
T ss_pred HhhCceeeeeccccccchhhhhhhhcCceEEEECHHH-HHHHHhcchhhhhccceEEecCCCCC------------CchH
Confidence 9999999999999999999999999999999999862 3333333232 1112233322111 0112
Q ss_pred HHHHHhhhccCCCC------CCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChH
Q psy2417 237 DEIERVGAQKMFEE------VPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 237 ~~l~~~~~~~~~~~------~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 310 (391)
+++...-......+ ...+-.++++.||||||||.||..+++|.-+..........++ ++++|+++..+||+
T Consensus 217 ~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g---~~~~DvvY~~lPLY 293 (649)
T KOG1179|consen 217 ESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFG---MTADDVVYTTLPLY 293 (649)
T ss_pred HHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhC---CCccceEEEcchhH
Confidence 23333222222222 2235677999999999999999999999999988887888888 99999999999999
Q ss_pred HHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH
Q psy2417 311 HMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV 364 (391)
Q Consensus 311 h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~ 364 (391)
|..+.+.. ..+|..|+|+|+-.. +...||+++.+|++|+..-+-.+++-|+++.
T Consensus 294 Hsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p 349 (649)
T KOG1179|consen 294 HSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQP 349 (649)
T ss_pred HHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCC
Confidence 99999988 789999999999765 9999999999999999999999999998873
No 91
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.4e-33 Score=278.38 Aligned_cols=265 Identities=17% Similarity=0.214 Sum_probs=218.8
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcC
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYS 163 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G 163 (391)
++.+.|++.++.+|+++|+.+.+ +.+||+||.+++.++|..|.+.|+++|++|+|+++|+.+|+++++||+++|
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 74 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQG------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSG 74 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCC------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhC
Confidence 46789999999999999998876 689999999999999999999999999999999999999999999999999
Q ss_pred CeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhh
Q psy2417 164 MIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVG 243 (391)
Q Consensus 164 ~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (391)
++++|+++.++.+++.++++..+++.++++.... .... ... ++.++. ...+....
T Consensus 75 ~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~-~~~~-----~~~-~~~~~~------------------~~~~~~~~ 129 (502)
T TIGR01734 75 HAYIPVDTSIPSERIEMIIEAAGPELVIHTAELS-IDAV-----GTQ-IITLSA------------------LEQAETSG 129 (502)
T ss_pred CEEeCCCCcChHHHHHHHHHhcCCCEEEeccccc-cccc-----CCc-eEEchH------------------hhhhhhhc
Confidence 9999999999999999999999999999987531 1110 111 121111 01111111
Q ss_pred hccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHH
Q psy2417 244 AQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFL 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~ 323 (391)
.. ........+++.++|+|||||||.||||+++|+++.+.+.+....+. +..+++++..+|++|.+++...+.++.
T Consensus 130 ~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~~~~~~~~~~~~l~ 205 (502)
T TIGR01734 130 GP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFP---LSEGKQFLNQAPFSFDLSVMDLYPCLA 205 (502)
T ss_pred CC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCC---CCCCceEEeecCceechhHHHHHHHHH
Confidence 10 11112346789999999999999999999999999999888877776 889999999999999999988899999
Q ss_pred hCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 324 VGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 324 ~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
.|+++++.+. ++..+++.+.++++|.+..+|.++..+.... ....+++++|.++++|+..
T Consensus 206 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~ 270 (502)
T TIGR01734 206 SGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEEL 270 (502)
T ss_pred CCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcC
Confidence 9999998764 7889999999999999999999998876552 2344567899989888754
No 92
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-33 Score=278.09 Aligned_cols=268 Identities=18% Similarity=0.157 Sum_probs=212.6
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
...++.+.|.++++.+|+++|+.+.+ +.+||+|+.++++++|++|.+.|+++|++|+++++|++++++++|||+
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 106 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDD------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVG 106 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCC------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 45689999999999999999998755 589999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
++|+++||+++.++.+++.++++++++++++++... ...+.. .. ..++.++... ..
T Consensus 107 ~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~-~~---~~~~~~~~~~-------------------~~ 162 (516)
T PRK13383 107 LLGADVVPISTEFRSDALAAALRAHHISTVVADNEF-AERIAG-AD---DAVAVIDPAT-------------------AG 162 (516)
T ss_pred HhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhH-HHHHHh-hh---cceEEeccch-------------------hh
Confidence 999999999999999999999999999999998752 222211 11 1222222210 00
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHH--HHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAA--ISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE 318 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~--~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 318 (391)
.. .. ...+...++.++|+|||||||.||||+++|...... .......++ +..+|+++..+|++|.+|+...
T Consensus 163 ~~--~~--~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~pl~h~~g~~~~ 235 (516)
T PRK13383 163 AE--ES--GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTR---LRTGSRISVAMPMFHGLGLGML 235 (516)
T ss_pred hh--cC--CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhc---cCCCCeEEEecCCcchhhHHHH
Confidence 00 00 011223466789999999999999999999843221 122223344 7889999999999999999887
Q ss_pred HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~~k 385 (391)
+.++..|+++++... ++..+++.++++++|.+.++|.++..+.+... ...+++++|.+++||+....
T Consensus 236 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~ 306 (516)
T PRK13383 236 MLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDP 306 (516)
T ss_pred HHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCH
Confidence 889999999988765 89999999999999999999999999876532 23346689999999877543
No 93
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-32 Score=276.64 Aligned_cols=295 Identities=18% Similarity=0.212 Sum_probs=220.6
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|.+.++++|+++|+.+.+ +.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~~~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 95 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFICMG------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLR 95 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEcC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4589999999999999999999876 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcch-HHHH----H---------H
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRM-ATMQ----R---------A 226 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~-~~~~----~---------~ 226 (391)
+|++++|++|.++.+++.+++++++++++++++.. ...+...... .++.++....... .... . .
T Consensus 96 ~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (557)
T PRK07059 96 AGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENF-ATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVP 174 (557)
T ss_pred cCeEEeccCcccCHHHHHHHHHccCceEEEEchhh-HHHHHHhhcccCCceeEEeccccccccccccccccccccccccc
Confidence 99999999999999999999999999999998752 1212111111 2333333221000 0000 0 0
Q ss_pred hhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC-CC---CCCCE
Q psy2417 227 RSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH-RP---KYSDV 302 (391)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~---~~~d~ 302 (391)
.........++++...+......+....++++++|+|||||||.||||+++|++++.++.......... .. ...+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 175 AWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred ccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 000112234555544332222223345688999999999999999999999999987765443322110 01 12457
Q ss_pred EEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHH
Q psy2417 303 LISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMF 378 (391)
Q Consensus 303 ~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~ 378 (391)
+++.+|++|.+++... +.++..|++.++.+. ++..+++.++++++|.+..+|.++..+.+.. ....+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 8889999999997655 778888998777654 8899999999999999999999999988762 23456678998888
Q ss_pred HHHHH
Q psy2417 379 NMAMG 383 (391)
Q Consensus 379 gga~~ 383 (391)
||+..
T Consensus 335 gg~~~ 339 (557)
T PRK07059 335 GGMAV 339 (557)
T ss_pred ccccC
Confidence 88653
No 94
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.6e-33 Score=278.55 Aligned_cols=296 Identities=20% Similarity=0.231 Sum_probs=219.7
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGL-GVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
.++.++|+++++.+|+++|+.+.+ +.+||.||.++++++|++|.+. |+++|++|+++++|+++|+++++||++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLG------VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCC------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 479999999999999999998765 6899999999999999999985 999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCc--chHHHHH-------------
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREV--RMATMQR------------- 225 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~--~~~~~~~------------- 225 (391)
+|++++|+++.++.+++.++++++++++++++... ...+...... ....++..... .......
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMF-GKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMV 176 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEecccc-chHHHHhhhccCceEEEeechhhccccccchhcccccccccccc
Confidence 99999999999999999999999999999997642 1211111110 11122111100 0000000
Q ss_pred HhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC------CCCC
Q psy2417 226 ARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH------RPKY 299 (391)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~------~~~~ 299 (391)
..........|+++...+......+.+...+++++|+|||||||.||||+++|+++...+......+... .+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK12492 177 PAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKE 256 (562)
T ss_pred cccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccC
Confidence 0000012245666554332222223345678999999999999999999999999988776655544210 0122
Q ss_pred -CCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHH
Q psy2417 300 -SDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIK 374 (391)
Q Consensus 300 -~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr 374 (391)
+++++..+|++|.+++... +..+..|+++++... ++..+++.++++++|++..+|.++..+.+.. ....+++++|
T Consensus 257 ~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 336 (562)
T PRK12492 257 GQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALK 336 (562)
T ss_pred CCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccccccee
Confidence 3578999999999998766 667788888776542 8899999999999999999999999988752 2345677899
Q ss_pred HHHHHHHHHHH
Q psy2417 375 RLMFNMAMGSK 385 (391)
Q Consensus 375 ~~~~gga~~~k 385 (391)
.+++||+....
T Consensus 337 ~~~~gG~~~~~ 347 (562)
T PRK12492 337 LTNSGGTALVK 347 (562)
T ss_pred EEEeccccCCH
Confidence 99999876543
No 95
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=9e-33 Score=274.23 Aligned_cols=264 Identities=17% Similarity=0.187 Sum_probs=220.5
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.++|+++++.+|+++++.+.+ +.+||+||.++++++|.+|.++|+++|++|+++++|+.+|+++++||+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~ 75 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLG------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKA 75 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCC------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 368899999999999999998766 68999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHh
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERV 242 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 242 (391)
|++++|+++.++.+++.++++.+++++++++.... .. . . .+..+.++++...
T Consensus 76 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~-~---------------------~~~~~~~~~~~~~ 127 (503)
T PRK04813 76 GHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELP--LE----I-L---------------------GIPVITLDELKDI 127 (503)
T ss_pred CCEEecCCCCChHHHHHHHHHhcCCCEEEeccccc--cc----c-c---------------------CCcEEehHHhhhh
Confidence 99999999999999999999999999999987531 00 0 0 1112233333221
Q ss_pred hh--ccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHH
Q psy2417 243 GA--QKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESA 320 (391)
Q Consensus 243 ~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~ 320 (391)
.. ..........++++++++|||||||.||||.++|+++...+......+. +..+++++..+|++|..++...+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~ 204 (503)
T PRK04813 128 FATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFA---LPEGPQFLNQAPYSFDLSVMDLYP 204 (503)
T ss_pred hhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcC---CCcCceeeecCCcchhHhHHHHHH
Confidence 11 1111123346788999999999999999999999999998888777776 889999999999999999988889
Q ss_pred HHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Q psy2417 321 MFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 321 ~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~ 383 (391)
+|..|+++++.+. ++..+++.+.++++|++..+|++++.+.... ....+++++|.++++|+..
T Consensus 205 ~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l 272 (503)
T PRK04813 205 TLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEEL 272 (503)
T ss_pred HHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcC
Confidence 9999999998764 7889999999999999999999998876552 3345667899988888754
No 96
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=5e-33 Score=278.26 Aligned_cols=277 Identities=17% Similarity=0.186 Sum_probs=221.2
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|+++++ |+++|+++.+ +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||++
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~ 95 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICGE------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLK 95 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHH
Confidence 4589999999887 9999999866 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc-------hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK-------CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEII 234 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+|++++++.+..+.+++.++++++++++++++.... ...+....+ .++.++..+... ..
T Consensus 96 ~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~-------------~~ 161 (536)
T PRK10946 96 LGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS-SLRVVLLLNDDG-------------EH 161 (536)
T ss_pred cCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC-CceEEEEecCCC-------------Cc
Confidence 999888777788888999999999999999986421 111111111 334444332211 11
Q ss_pred eHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHH
Q psy2417 235 RFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLE 314 (391)
Q Consensus 235 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 314 (391)
.+.++....... ....+..++++++|+|||||||.||||+++|+++...+......++ +..+|++++.+|++|.++
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~---~~~~~~~l~~~p~~h~~~ 237 (536)
T PRK10946 162 SLDDAINHPAED-FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICG---FTPQTRYLCALPAAHNYP 237 (536)
T ss_pred cHHHHhhCcccc-cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcC---CCCCceEEEecCcccccc
Confidence 233333222111 1123446789999999999999999999999999999988887777 889999999999999998
Q ss_pred HHH--HHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHHH
Q psy2417 315 RTC--ESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 315 ~~~--~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~~ 384 (391)
+.. .+.+|..|+++++.+. ++..+++.++++++|++.++|.++..+.+... ....++++|.+++||+...
T Consensus 238 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~ 313 (536)
T PRK10946 238 MSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLS 313 (536)
T ss_pred chhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCC
Confidence 764 4788999999998765 88999999999999999999999999987632 2234568888888887553
No 97
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.7e-33 Score=300.20 Aligned_cols=283 Identities=20% Similarity=0.192 Sum_probs=219.6
Q ss_pred CCCCHHHHHHHHHHhcCC-CceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNN-GRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd-~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
...++.+.|+++++++|+ +.++.+.+. +.+||+||+++++++|++|++ |+++|++|+++++|+++++++++||
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~ 702 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDPVN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFAL 702 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECCCC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHH
Confidence 346788889999888874 566654332 689999999999999999975 9999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc----hhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEe
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK----CNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIR 235 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~----~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+++|++++|+|+.++.+++.++++++++++++++.... .....+..+ ....++.+++.... ...
T Consensus 703 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~-----------~~~ 770 (1140)
T PRK06814 703 QSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE-FGIRIIYLEDVRAQ-----------IGL 770 (1140)
T ss_pred HHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc-cCceEEEehHhhcc-----------CCh
Confidence 99999999999999999999999999999999986421 011111122 22344444432100 001
Q ss_pred HHHHHHhhhcc-CC-CCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHH
Q psy2417 236 FDEIERVGAQK-MF-EEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHML 313 (391)
Q Consensus 236 ~~~l~~~~~~~-~~-~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 313 (391)
++.+....... .. ......++|+++|+|||||||.||||+++|+++.+.+......++ +.++|++++.+|++|.+
T Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~---~~~~d~~l~~~pl~h~~ 847 (1140)
T PRK06814 771 ADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARID---FSPEDKVFNALPVFHSF 847 (1140)
T ss_pred HHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhC---CCCcCEEEEecchHHHH
Confidence 11111110000 00 011346899999999999999999999999999999888887777 88999999999999999
Q ss_pred HHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 314 ERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 314 g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
++... +.++..|+++++.+. +...+.+.++++++|++..+|++++.+.+. ....+++++|.+++||+....
T Consensus 848 g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~-~~~~~~~~lr~v~~gg~~l~~ 921 (1140)
T PRK06814 848 GLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARY-AHPYDFRSLRYVFAGAEKVKE 921 (1140)
T ss_pred HHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhh-cccccccceeEEEEcCCcCCH
Confidence 99554 889999999998764 667788999999999999999999988765 234567799999999976543
No 98
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.9e-32 Score=272.38 Aligned_cols=279 Identities=19% Similarity=0.199 Sum_probs=219.5
Q ss_pred CHHHHHHHH-HHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 84 TLYDAFRKG-AKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 84 tl~~~l~~~-~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
...+++.+. ++.+||++|+...+ +.+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++||+++
T Consensus 5 ~~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~ 78 (508)
T TIGR02262 5 AAEDLLDRNVVEGRGGKTAFIDDI------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRA 78 (508)
T ss_pred HHHHHHHHHHhcccCCceEEEeCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 346677776 67799999998755 78999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHH
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIE 240 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (391)
|++++|+++.++.+++.++++.+++++++++... ...+.+.... .++.++..+.... ....+.++.
T Consensus 79 G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 146 (508)
T TIGR02262 79 GIVPVALNTLLTADDYAYMLEDSRARVVFVSGEL-LPVIKAALGKSPHLEHRVVVGRPEA-----------GEVQLAELL 146 (508)
T ss_pred CcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhh-HHHHHHHHhcCCCccEEEEeCCCCc-----------ccccHHHHh
Confidence 9999999999999999999999999999998752 3332222111 4455555543211 112343333
Q ss_pred HhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHH-HHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-
Q psy2417 241 RVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISA-ALLQLSDHRPKYSDVLISFLPLAHMLERTCE- 318 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~- 318 (391)
..... ...+....++++++|+|||||||.||||+++|+++...+.. ....++ +..+|+++..+|++|++++...
T Consensus 147 ~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~~~~~~~~~~ 222 (508)
T TIGR02262 147 ATESE-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLG---IREDDVVFSAAKLFFAYGLGNAL 222 (508)
T ss_pred hcCCC-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcC---CCCCCEEEEcCchHHHHHHHHHH
Confidence 22111 11223345789999999999999999999999999987765 344455 8899999999999999999765
Q ss_pred HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~~gga~~~ 384 (391)
+.++..|+++++.+. ++..+++.+++++||++.++|.++..+..... ......++|.+++||+...
T Consensus 223 ~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~ 291 (508)
T TIGR02262 223 TFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALP 291 (508)
T ss_pred HHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCC
Confidence 678999999998764 78999999999999999999999988765421 2234458888888886543
No 99
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-32 Score=275.19 Aligned_cols=285 Identities=18% Similarity=0.218 Sum_probs=215.8
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..++.++|+++++.+|+++|+.+.+ +.+||.||.++++++|.+|.++|+++|++|+++++|+++|+++++||++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 105 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFYG------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILK 105 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHH
Confidence 3589999999999999999998876 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcchHHH-HHH-hhCC-----ceE
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRMATM-QRA-RSRA-----IEI 233 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~-~~~-~~~~-----~~~ 233 (391)
+|++++|++|.++.+++.++++++++++++++... ...+.+.... .++.++..+....... ... .... ...
T Consensus 106 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~-~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (567)
T PRK06178 106 LGAVHVPVSPLFREHELSYELNDAGAEVLLALDQL-APVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAA 184 (567)
T ss_pred hCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccch-HHHHHHhhccCCcceEEEeccccccccccccccccccccccccc
Confidence 99999999999999999999999999999998752 3333222211 3344443321110000 000 0000 000
Q ss_pred EeHHHHHHhhhc--cCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHh-hcCCCCCCCCEEEEcCChH
Q psy2417 234 IRFDEIERVGAQ--KMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQ-LSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 234 ~~~~~l~~~~~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~~~~d~~l~~~pl~ 310 (391)
..+.++...... .........++++++|+|||||||.||||++||++++..+...... .. +..+|++++.+|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~ 261 (567)
T PRK06178 185 AGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVV---GGEDSVFLSFLPEF 261 (567)
T ss_pred cccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhcc---CCCCcEEEEecchH
Confidence 112222221111 1111233567999999999999999999999999998876554443 33 78899999999999
Q ss_pred HHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHH
Q psy2417 311 HMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRL 376 (391)
Q Consensus 311 h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~ 376 (391)
|.+|+... +.+++.|+++++.+. ++..+++.++++++|.+..+|..+..+.+.. ....+++++|.+
T Consensus 262 ~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~ 330 (567)
T PRK06178 262 WIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQV 330 (567)
T ss_pred HHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheee
Confidence 99998655 789999999999876 8999999999999999999999998887642 223344555544
No 100
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.6e-32 Score=276.05 Aligned_cols=294 Identities=24% Similarity=0.315 Sum_probs=221.0
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHH-hCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLL-GLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
.++.++|.+.++.+|+++|+++.+ +.+||+||.++++++|.+|. +.|+++|++|+++++|+++++++++||++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFG------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECC------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 479999999999999999998866 78999999999999999997 68999999999999999999999999999
Q ss_pred cCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcch-----H----H-HHH-Hh--
Q psy2417 162 YSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVRM-----A----T-MQR-AR-- 227 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~-----~----~-~~~-~~-- 227 (391)
+|++++|++|.++.+++.+++++++++++++++.. ...+.+.... ....++..+.... . . ... ..
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNF-GTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLV 177 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchh-HHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccc
Confidence 99999999999999999999999999999998753 2222222211 2233433221000 0 0 000 00
Q ss_pred --hCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC-CCCC-CCEE
Q psy2417 228 --SRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH-RPKY-SDVL 303 (391)
Q Consensus 228 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~~~-~d~~ 303 (391)
..-.....+++................++++++|+|||||||.||||+++|.++...+......+... .+.. ++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08751 178 PEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVV 257 (560)
T ss_pred cccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceE
Confidence 00011223444443322221222334678999999999999999999999999998877665544311 0223 4677
Q ss_pred EEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHH
Q psy2417 304 ISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFN 379 (391)
Q Consensus 304 l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~g 379 (391)
+..+|++|.+++... +..+..|+++++... ++..+++.++++++|++..+|.++..+.+.. ..+.++++||.+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~g 337 (560)
T PRK08751 258 ITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGG 337 (560)
T ss_pred EEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeC
Confidence 889999999998765 677888888877653 8899999999999999999999999988752 344567899999999
Q ss_pred HHHH
Q psy2417 380 MAMG 383 (391)
Q Consensus 380 ga~~ 383 (391)
|+..
T Consensus 338 G~~~ 341 (560)
T PRK08751 338 GMAV 341 (560)
T ss_pred CCCC
Confidence 8754
No 101
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-32 Score=273.56 Aligned_cols=293 Identities=20% Similarity=0.257 Sum_probs=216.1
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.++|++.++.+|+++|+.+.+ +.+||+||.+++.++|++|.+.|+++|++|+++++|++++++++|||+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~------~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLG------KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLA 97 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 579999999999999999999876 78999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc-CccEEEEecCcc-----hH-HHHHHhh-------
Q psy2417 163 SMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR-CLKKIISIREVR-----MA-TMQRARS------- 228 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~l~~ii~~~~~~-----~~-~~~~~~~------- 228 (391)
|++++|++|.++.+++.++++.+++++++++... ...+...... ....++...... .. .......
T Consensus 98 G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 98 GGIVVQTNPLYTERELEYQLHDSGAKVILCLDLV-FPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred CeEEeccCcccCHHHHHHHHhccCCeEEEEeccc-hhhhhccchhhccceeEEeccccccccccccccchhhcccccccc
Confidence 9999999999999999999999999999998752 2221111110 222222211000 00 0000000
Q ss_pred ---CCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHh-hcCCCCCCCCEEE
Q psy2417 229 ---RAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQ-LSDHRPKYSDVLI 304 (391)
Q Consensus 229 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~~~~d~~l 304 (391)
.......|+.+.... ...........+++++|+|||||||.||||+++|+++.......... +.. ...+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~--~~~~~~~l 253 (563)
T PRK06710 177 KVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNC--KEGEEVVL 253 (563)
T ss_pred cccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCC--CCCCceEE
Confidence 000000122221111 00001111235789999999999999999999999998654333332 220 23456889
Q ss_pred EcCChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHH-HHHhcCchhHHHHHHHHH
Q psy2417 305 SFLPLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK-VMAQIRPSFIKRLMFNMA 381 (391)
Q Consensus 305 ~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~~slr~~~~gga 381 (391)
+.+|++|.+|+... +.+++.|+++++.+. ++..+++.|+++++|++.++|+++..+.+. .....+++++|.+++||+
T Consensus 254 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~ 333 (563)
T PRK06710 254 GVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSA 333 (563)
T ss_pred EeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCC
Confidence 99999999998766 678999999998765 899999999999999999999999998875 223446679999999997
Q ss_pred HHHH
Q psy2417 382 MGSK 385 (391)
Q Consensus 382 ~~~k 385 (391)
...+
T Consensus 334 ~~~~ 337 (563)
T PRK06710 334 PLPV 337 (563)
T ss_pred cCCH
Confidence 6543
No 102
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-32 Score=272.56 Aligned_cols=257 Identities=17% Similarity=0.144 Sum_probs=207.2
Q ss_pred HHHHHhcCCCceEEEe-ecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEE
Q psy2417 90 RKGAKESNNGRCLGWR-QNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVA 168 (391)
Q Consensus 90 ~~~~~~~pd~~al~~~-~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vp 168 (391)
+.+++.+||++|+.+. +. +.+||+||.++++++|.+|.+.|+.+|++|+++++|+++|++++|||+++|++++|
T Consensus 2 ~~~a~~~p~~~a~~~~~~~-----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 76 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALG-----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVP 76 (488)
T ss_pred chhhhhCCCceEEEecCCC-----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 4567889999999763 22 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhcc-C
Q psy2417 169 LYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQK-M 247 (391)
Q Consensus 169 l~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 247 (391)
+++.++.+++.++++++++++++++..... . .. ....++++....... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-----~---~~----------------------~~~~~~~~~~~~~~~~~ 126 (488)
T PRK09088 77 LNWRLSASELDALLQDAEPRLLLGDDAVAA-----G---RT----------------------DVEDLAAFIASADALEP 126 (488)
T ss_pred eCccCCHHHHHHHHHhCCCCEEEEcchhhc-----c---cc----------------------cccchhhhhhhcccccc
Confidence 999999999999999999999999874210 0 00 001122221111111 1
Q ss_pred CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCc
Q psy2417 248 FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGG 326 (391)
Q Consensus 248 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~ 326 (391)
.......++++++++|||||||.||||.++|+++...+........ ...+|++++.+|++|++++... +.++..|+
T Consensus 127 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~---~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 127 ADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGR---VDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred ccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhC---CCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 1112335688999999999999999999999999988777766665 7889999999999999999876 67888999
Q ss_pred EEEEeCC-CHHhHHHHHH--hcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Q psy2417 327 SIGYYSG-DIKNLTEDMK--TLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 327 ~vv~~~~-~~~~l~~~i~--~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~gga~~~ 384 (391)
++++.+. ++..++..+. ++++|+++.+|.+++.+.+.. ....+++++|.+++||+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~ 265 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHA 265 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCC
Confidence 9998765 7888888886 489999999999999887653 23345678999999997653
No 103
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-32 Score=277.78 Aligned_cols=275 Identities=18% Similarity=0.220 Sum_probs=206.5
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecC---CCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNI---SRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~---~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
++.++|++.+..+|+++|+.+.+.. .+..+.+||+||..+++++|++|.++| .+|++|+|+++|+++|++++|||+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 6789999999999999999875421 122478999999999999999999999 689999999999999999999999
Q ss_pred hcCCeEEEccC---CCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc----CccEEEEecCcchHHHHHHhhCCceE
Q psy2417 161 CYSMIIVALYD---TLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR----CLKKIISIREVRMATMQRARSRAIEI 233 (391)
Q Consensus 161 ~~G~~~vpl~~---~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~----~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (391)
++|+++||+++ ..+.+++.++++++++++++++... ...+...... ....++.++.
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------------- 143 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAV-VDDVTEYVAPQPGQSAPPVIEVDL---------------- 143 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHH-HHHHHHHHhhcccccccceEeecc----------------
Confidence 99999999997 5578999999999999999998752 2222211110 1112222211
Q ss_pred EeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhh-cCC--CCCCCCEEEEcCChH
Q psy2417 234 IRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQL-SDH--RPKYSDVLISFLPLA 310 (391)
Q Consensus 234 ~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-~~~--~~~~~d~~l~~~pl~ 310 (391)
+. .............++++++|+|||||||.||||+++|+++++.+......+ ... ....++++++.+|++
T Consensus 144 -----~~-~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 217 (578)
T PRK05850 144 -----LD-LDSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFY 217 (578)
T ss_pred -----cc-cccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCC
Confidence 00 000000011234578999999999999999999999999998876655432 210 134688999999999
Q ss_pred HHHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHH-HHHHHHHH----HHhcCchhHHHHHHH
Q psy2417 311 HMLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRL-LNRMYDKV----MAQIRPSFIKRLMFN 379 (391)
Q Consensus 311 h~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~-l~~l~~~~----~~~~~~~slr~~~~g 379 (391)
|++|+... +.+++.|+++++.+. ++..+++.+++++++++ .+|.+ +..+.... ....+++++|.+++|
T Consensus 218 h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~g 296 (578)
T PRK05850 218 HDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISG 296 (578)
T ss_pred CCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEEC
Confidence 99998765 899999999999763 68999999999999866 55554 44443321 123456789999999
Q ss_pred HHHH
Q psy2417 380 MAMG 383 (391)
Q Consensus 380 ga~~ 383 (391)
|+..
T Consensus 297 g~~~ 300 (578)
T PRK05850 297 SERV 300 (578)
T ss_pred cCCC
Confidence 8754
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-32 Score=274.53 Aligned_cols=279 Identities=19% Similarity=0.204 Sum_probs=213.7
Q ss_pred cCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 79 YDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 79 ~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
.+...++.++|+..++.+|+..++ ..+ ++.++.+||.||+++++++|.+|.++|+++|++|+++++|+++|+++++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 93 (579)
T PRK09192 17 YADFPTLVEALDYAALGEAGMNFY-DRR--GQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFA 93 (579)
T ss_pred ccchhhHHHHHHHhhccCCceEEE-ecC--CCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHH
Confidence 345579999999999998865543 322 22347899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEccCCCC-------HHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCc
Q psy2417 159 AYCYSMIIVALYDTLG-------PDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAI 231 (391)
Q Consensus 159 ~~~~G~~~vpl~~~~~-------~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (391)
|+++|++++|+++.++ .+++.++++.+++++++++... ...+.+... ....+
T Consensus 94 ~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~-~~~~~~~~~-~~~~~------------------- 152 (579)
T PRK09192 94 CQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDEL-LPWVNEATH-GNPLL------------------- 152 (579)
T ss_pred HHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHH-HHHHHHhhc-ccccc-------------------
Confidence 9999999999987543 6899999999999999998752 222222111 11111
Q ss_pred eEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHH-hhcCCCCCCCCEEEEcCChH
Q psy2417 232 EIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALL-QLSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 232 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~~~~d~~l~~~pl~ 310 (391)
....++++........ ......++++++|+|||||||.||||+++|++++..+..... .++ +.++|+++.++|++
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~---~~~~d~~l~~~p~~ 228 (579)
T PRK09192 153 HVLSHAWFKALPEADV-ALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLK---VRPGDRCVSWLPFY 228 (579)
T ss_pred ceeehhhhcccCCCcc-ccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhccc---CCCCCeEEEeCCCC
Confidence 1223333322211111 112345789999999999999999999999999998877776 666 88999999999999
Q ss_pred HHHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHH----HHhcCchhHHHHHHHH
Q psy2417 311 HMLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV----MAQIRPSFIKRLMFNM 380 (391)
Q Consensus 311 h~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~----~~~~~~~slr~~~~gg 380 (391)
|++|+... +.++..|+++++.+. ++..+++.+.++++|++..+|.++..+.... ....+++++|.+++||
T Consensus 229 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG 308 (579)
T PRK09192 229 HDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGA 308 (579)
T ss_pred CcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecC
Confidence 99999876 678999999987652 6889999999999998877666565554332 1235678999999998
Q ss_pred HHHHH
Q psy2417 381 AMGSK 385 (391)
Q Consensus 381 a~~~k 385 (391)
+....
T Consensus 309 ~~l~~ 313 (579)
T PRK09192 309 DMIRP 313 (579)
T ss_pred ccCCH
Confidence 77643
No 105
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-32 Score=287.09 Aligned_cols=278 Identities=14% Similarity=0.179 Sum_probs=204.3
Q ss_pred CCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHH
Q psy2417 80 DDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGA 159 (391)
Q Consensus 80 ~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~ 159 (391)
+...++.++|+++++++||++|+.+.+ +.+||+||+++++++|++|+++|+++|++|+|+++|+++|+++++||
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~ 517 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDG------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAAL 517 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 345689999999999999999999866 68999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHH
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEI 239 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (391)
+++|++++|++|. +++.+++++++++++|++... ...+.. ....++.++........ .........++++
T Consensus 518 ~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~-~~~~~~----~~~~iiv~~~~~~~~~~--~~~~~~~~~~~~~ 587 (994)
T PRK07868 518 SRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTN-LEAARQ----LPGRVLVLGGGESRDLD--LPDDADVIDMEKI 587 (994)
T ss_pred HhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHH-HHHHHh----cCceEEEecCCcccccc--CCcchhhhhhhhc
Confidence 9999999999985 689999999999999998642 232221 12345555432100000 0000001111111
Q ss_pred HHhhhccC--CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH
Q psy2417 240 ERVGAQKM--FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC 317 (391)
Q Consensus 240 ~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 317 (391)
........ ..+.+..++|++||+|| ||||.||++.++|.+...........+. +..+|++++.+|++|++++..
T Consensus 588 ~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~---l~~~d~~L~~~Pl~h~~gl~~ 663 (994)
T PRK07868 588 DPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAA---LDRRDTVYCLTPLHHESGLLV 663 (994)
T ss_pred CcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcC---CCCCCeEEEecChHHHhHHHH
Confidence 11000000 01112246899999999 6888888888888776655444445555 889999999999999999988
Q ss_pred HHHHH-HhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-HhcCchhHHHHH
Q psy2417 318 ESAMF-LVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-AQIRPSFIKRLM 377 (391)
Q Consensus 318 ~~~~L-~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~~slr~~~ 377 (391)
.+.++ ..|+++++.+. ++..+++.|++++||+++++|++++.+.+... ...++++||.++
T Consensus 664 ~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~ 726 (994)
T PRK07868 664 SLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI 726 (994)
T ss_pred HHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe
Confidence 75544 44555555544 99999999999999999999999999987522 233556787655
No 106
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-32 Score=266.94 Aligned_cols=268 Identities=18% Similarity=0.179 Sum_probs=202.1
Q ss_pred HHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEcc
Q psy2417 91 KGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALY 170 (391)
Q Consensus 91 ~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~ 170 (391)
.+++.+|+++|+.+.+. .+.+||+||.++++++|++|.++|+++|++|+++++|++++++++|||+++|++++|++
T Consensus 5 ~~a~~~p~~~a~~~~~~----~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 5 THAQIAPDRPAVIVAET----GEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAIN 80 (501)
T ss_pred hhhhhCCCCcEEEecCC----CeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccc
Confidence 45678999999987431 26899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCC
Q psy2417 171 DTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEE 250 (391)
Q Consensus 171 ~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 250 (391)
+.++++++.++++++++++++++.. ...............+.+..... ....+++.... . .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~---~--~~ 142 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAA--LDGLAAKVGADLPLRLSFGGEID-----------GFGSFEAALAG---A--GP 142 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcch--hhhHHHHhhhccceEEEecCccc-----------ccccHHHHhcc---c--CC
Confidence 9999999999999999999999764 22222211111112222221100 11123322211 0 01
Q ss_pred CCCCCCCceEEEecCCCCCCCcEEEe--ehhHHHHHH----HHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHh
Q psy2417 251 VPPKPTDLCTICYTSGTTGNPKGVML--THGNVIAAI----SAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLV 324 (391)
Q Consensus 251 ~~~~~~~~a~i~~TSGSTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~ 324 (391)
......++++|+|||||||.||||++ +|.++.... ......+. +..+|++++.+|++|.+++...+..+..
T Consensus 143 ~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~h~~~~~~~~~~~~~ 219 (501)
T PRK13390 143 RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYD---ISESDIYYSSAPIYHAAPLRWCSMVHAL 219 (501)
T ss_pred CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhC---CCCCCeEEecccchhhhHHHHHHHHHhc
Confidence 11123357999999999999999995 566655432 11223344 7889999999999999998766667788
Q ss_pred CcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHHH
Q psy2417 325 GGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 325 G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~~ 383 (391)
|+++++.+. ++..+++.|+++++|++.++|+++..+.+.. ....+++++|.++.||+..
T Consensus 220 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~ 282 (501)
T PRK13390 220 GGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPC 282 (501)
T ss_pred CceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCC
Confidence 999998765 8999999999999999999999999887642 2334567999999888764
No 107
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-31 Score=269.16 Aligned_cols=294 Identities=20% Similarity=0.272 Sum_probs=216.4
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
..++.++|++.++.+|+++|+.+.+ +.+||+||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~------~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 95 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMG------EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGIL 95 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECC------ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 4579999999999999999998765 689999999999999999984 899999999999999999999999999
Q ss_pred hcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--hhHHHhhcccCccEEEEecCcch--HHHH-------H-H--
Q psy2417 161 CYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--CNQIIDRAPRCLKKIISIREVRM--ATMQ-------R-A-- 226 (391)
Q Consensus 161 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--~~~~~~~~~~~l~~ii~~~~~~~--~~~~-------~-~-- 226 (391)
++|++++|++|.++.+++.++++.+++++++++.... ...+.... ..+.++....... .... . .
T Consensus 96 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08974 96 RAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT--PVKHVILTRMGDQLSTAKGTLVNFVVKYIKR 173 (560)
T ss_pred HcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc--CcceEEEecccccccccccccccchhhhccc
Confidence 9999999999999999999999999999999976521 11111111 2233332211000 0000 0 0
Q ss_pred ---hhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEE
Q psy2417 227 ---RSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVL 303 (391)
Q Consensus 227 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~ 303 (391)
.........+.+....+...........++++++|+|||||||.||||.++|+++..++......+.......++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (560)
T PRK08974 174 LVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELV 253 (560)
T ss_pred ccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEE
Confidence 00000112222222222111111122467899999999999999999999999999877654443321113456788
Q ss_pred EEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH-HHhcCchhHHHHHHH
Q psy2417 304 ISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV-MAQIRPSFIKRLMFN 379 (391)
Q Consensus 304 l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~~slr~~~~g 379 (391)
+..+|++|.+++... +..+..|+++++... ++..+++.++++++|.+..+|.+++.+.+.. ....+++++|.+++|
T Consensus 254 ~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~g 333 (560)
T PRK08974 254 VTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGG 333 (560)
T ss_pred EEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEec
Confidence 999999999998765 677889998877643 7889999999999999999999999987652 233456688888888
Q ss_pred HHHH
Q psy2417 380 MAMG 383 (391)
Q Consensus 380 ga~~ 383 (391)
|+..
T Consensus 334 g~~~ 337 (560)
T PRK08974 334 GMAV 337 (560)
T ss_pred CccC
Confidence 8754
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-32 Score=270.23 Aligned_cols=268 Identities=19% Similarity=0.219 Sum_probs=214.0
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
.++.+.+...+..+|+.+++...+. .+.+||.||+++++++|.+|.+.|+++|++|+|+++|+++|+++++||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~ 77 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEPDA----PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMR 77 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecCCC----ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHc
Confidence 3678888899999999998866542 378999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCCHHHH-------HHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEe
Q psy2417 163 SMIIVALYDTLGPDAC-------AFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIR 235 (391)
Q Consensus 163 G~~~vpl~~~~~~~~l-------~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
|++++|+++..+.+++ .++++.++++.++++... ........ ..++.++.
T Consensus 78 g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~---------------------~~~~~~~~ 134 (545)
T PRK07768 78 GASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPF--LAAAPVLE---------------------EKGIRVLT 134 (545)
T ss_pred CccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchh--hhhhhhhc---------------------ccCCceee
Confidence 9999999998887655 456777899999997752 11111111 01223455
Q ss_pred HHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCC-CEEEEcCChHHHHH
Q psy2417 236 FDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYS-DVLISFLPLAHMLE 314 (391)
Q Consensus 236 ~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~-d~~l~~~pl~h~~g 314 (391)
++++...... .+....++++++|+|||||||.||||+++|+++..........++ +..+ |++++.+|++|+++
T Consensus 135 ~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g 208 (545)
T PRK07768 135 VADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAE---FDVETDVMVSWLPLFHDMG 208 (545)
T ss_pred hhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcC---CCCCCceeEEeCCCccchH
Confidence 6665542211 223446799999999999999999999999999998887777766 6766 89999999999999
Q ss_pred HHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHH-----HhcCchhHHHHHHHHHHH
Q psy2417 315 RTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVM-----AQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 315 ~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~-----~~~~~~slr~~~~gga~~ 383 (391)
+... +.++..|+++++.+. ++..+.+.++++++|++..+|.++..+.+... ...+++++|.+++||+..
T Consensus 209 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~ 288 (545)
T PRK07768 209 MVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPI 288 (545)
T ss_pred HHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCC
Confidence 9876 678999999988753 67888999999999999888888877665431 135677899999888765
No 109
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-31 Score=263.62 Aligned_cols=243 Identities=20% Similarity=0.224 Sum_probs=200.8
Q ss_pred HHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEc
Q psy2417 90 RKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVAL 169 (391)
Q Consensus 90 ~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl 169 (391)
+..++.+|+++|+.+.+ +.+||+||.++++++|.+|.+.|+.+|++|+++++|+++++++++||+++|++++|+
T Consensus 10 ~~~a~~~~~~~a~~~~~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 10 RHWAQVRPQAIALRLND------EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred HHHHHhCCCceeeecCC------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 55688999999998765 789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCC
Q psy2417 170 YDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFE 249 (391)
Q Consensus 170 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 249 (391)
++..+.+++..+++++++++++++.+.. .+. .+... .+. ......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-----~~~~~----------------------~~~------~~~~~~ 128 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGEN--TFS-----ALTSL----------------------HLQ------LVEGAH 128 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCccc--chh-----hcccc----------------------ccc------cccccC
Confidence 9999999999999999999999987521 110 00000 000 000011
Q ss_pred CCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEE
Q psy2417 250 EVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIG 329 (391)
Q Consensus 250 ~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv 329 (391)
+....++++++++|||||||.||||+++|++++..+......++ +..+|+++..+|++|.+|+...+.+|..|++++
T Consensus 129 ~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~ 205 (458)
T PRK09029 129 AVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMP---FTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLV 205 (458)
T ss_pred cccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCC---CCccceEEEecCcHhhhhhHHHHHHHhCCceEE
Confidence 23346789999999999999999999999999999888877777 889999999999999999977688999999999
Q ss_pred EeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy2417 330 YYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 330 ~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~ 383 (391)
+.+. ..+++.+ .++|.+..+|+++..+...... ..++|.+++||+..
T Consensus 206 ~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~---~~~l~~i~~gG~~~ 252 (458)
T PRK09029 206 VRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE---PLSLKAVLLGGAAI 252 (458)
T ss_pred eCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc---CCcceEEEECCCCC
Confidence 8764 5566776 4799999999999988765322 33788888888754
No 110
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-32 Score=266.65 Aligned_cols=243 Identities=17% Similarity=0.141 Sum_probs=200.1
Q ss_pred HHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCC
Q psy2417 93 AKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDT 172 (391)
Q Consensus 93 ~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~ 172 (391)
....++++|+.+.+ +.+||+||.++++++|..|. ++++|+++++|+++|+++++||+++|++++|+++.
T Consensus 10 ~~~~~~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~ 78 (471)
T PRK07787 10 AAAADIADAVRIGG------RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPD 78 (471)
T ss_pred hcccCCceEEEeCC------cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCC
Confidence 44578899998866 79999999999999999996 46999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCC
Q psy2417 173 LGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVP 252 (391)
Q Consensus 173 ~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 252 (391)
.+.+++.++++++++++++++...... .+..+. +... ... ......
T Consensus 79 ~~~~~l~~~l~~~~~~~il~~~~~~~~--------~~~~~~-~~~~--------------~~~-----------~~~~~~ 124 (471)
T PRK07787 79 SGVAERRHILADSGAQAWLGPAPDDPA--------GLPHVP-VRLH--------------ARS-----------WHRYPE 124 (471)
T ss_pred CChHHHHHHHHhcCCCEEEecCCcccc--------ccccee-eecc--------------ccc-----------cccCCC
Confidence 999999999999999999997642100 111110 0000 000 001112
Q ss_pred CCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEe
Q psy2417 253 PKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYY 331 (391)
Q Consensus 253 ~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~ 331 (391)
..++++++|+|||||||.||||+++|+++...+......++ +..+|++++.+|++|.+|+... +.++..|+++++.
T Consensus 125 ~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 201 (471)
T PRK07787 125 PDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQ---WTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT 201 (471)
T ss_pred CCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcC---CCccceeEeccCCeeechhHHHHHHHHhcCCEEEec
Confidence 45789999999999999999999999999999888877777 8899999999999999999876 8899999999987
Q ss_pred CC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy2417 332 SG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 332 ~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~ 384 (391)
+. ++..+++.++ +++|++.++|.++..+.+......+++++|.++.||+...
T Consensus 202 ~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~ 254 (471)
T PRK07787 202 GRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVSGSAALP 254 (471)
T ss_pred CCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEECCCCCC
Confidence 65 8999999999 9999999999999998875333345668888888887654
No 111
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-31 Score=259.19 Aligned_cols=216 Identities=15% Similarity=0.077 Sum_probs=186.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
+.+||+||.++++++|..|. +|+++|++|+|+++|+++++++++|++++|++++|+++..+.+++..++++++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 68999999999999999985 78999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCc
Q psy2417 193 DDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PK 272 (391)
+.... . .. ......++++++|+|||||||.||
T Consensus 86 ~~~~~----------~------~~--------------------------------~~~~~~~~~~~~i~~TSGtTG~PK 117 (414)
T PRK08308 86 GESDF----------T------KL--------------------------------EAVNYLAEEPSLLQYSSGTTGEPK 117 (414)
T ss_pred cCccc----------c------cc--------------------------------cCCCCCCCCceEEEECCCCCCCCc
Confidence 76310 0 00 001235788999999999999999
Q ss_pred EEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEE
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~ 350 (391)
||+++|+++.+.+......+. +..+|+.+..+|++|.+|+... +.+|..|+++++.+. ++..+++.++++++|++
T Consensus 118 gv~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 118 LIRRSWTEIDREIEAYNEALN---CEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEEehHhHHHHHHHHHHhhC---CCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEE
Confidence 999999999998888877777 7889999999999999998765 889999999998765 89999999999999999
Q ss_pred ecChHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy2417 351 PAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 351 ~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~ 383 (391)
+++|.++..+.+.... ..+++.+++||+..
T Consensus 195 ~~~P~~~~~l~~~~~~---~~~l~~~~~~G~~l 224 (414)
T PRK08308 195 YAVPLMLHILGRLLPG---TFQFHAVMTSGTPL 224 (414)
T ss_pred EcCHHHHHHHHhcCCc---cccccEEEEccCCC
Confidence 9999999998765321 12566667777643
No 112
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.98 E-value=9.5e-31 Score=260.40 Aligned_cols=273 Identities=15% Similarity=0.141 Sum_probs=209.4
Q ss_pred HHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEc
Q psy2417 90 RKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVAL 169 (391)
Q Consensus 90 ~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl 169 (391)
...++++|+++|+.+... .+.+||.||.++++++|++|.++|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 4 ~~~a~~~p~~~a~~~~~~----~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 4 GIHAQTTPDKPAVIMAST----GEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhhHhhCCCceEEEecCC----CCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 456788999999987421 1679999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhccc--CccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccC
Q psy2417 170 YDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPR--CLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKM 247 (391)
Q Consensus 170 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 247 (391)
++.++.+++.++++++++++++++... ...+.+.... .....+.++.... ......+++.... ..
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~ 146 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAK-LDVARALLKQCPGVRHRLVLDGDGE---------LEGFVGYAEAVAG---LP 146 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhh-HHHHHHHHhcCCCceEEEEecCCCC---------CcccccHHHHhcC---CC
Confidence 999999999999999999999998763 2222211111 2334444432110 0112233332211 11
Q ss_pred CCCCCCCCCCceEEEecCCCCCCCcEEEe--ehhHHHHH---HHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHH
Q psy2417 248 FEEVPPKPTDLCTICYTSGTTGNPKGVML--THGNVIAA---ISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMF 322 (391)
Q Consensus 248 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~--th~~l~~~---~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L 322 (391)
.......++.++|+|||||||.||||++ +|.++... .......+. +..+++++..+|++|.+++...+.++
T Consensus 147 -~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~h~~~~~~~~~~~ 222 (511)
T PRK13391 147 -ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWG---FRSDMVYLSPAPLYHSAPQRAVMLVI 222 (511)
T ss_pred -CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcC---CCCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 1112234567999999999999999995 56665433 233344455 78899999999999999998888899
Q ss_pred HhCcEEEEeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHHH
Q psy2417 323 LVGGSIGYYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 323 ~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~~ 383 (391)
..|+++++.+. ++..+++.++++++|++.++|+++..+.+.. ....+++++|.+++||+..
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~ 287 (511)
T PRK13391 223 RLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPC 287 (511)
T ss_pred HcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCC
Confidence 99999999866 9999999999999999999999998887542 2334577899999888754
No 113
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.97 E-value=6.1e-31 Score=257.32 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=180.8
Q ss_pred EEeHHHHHHHHHHHHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 114 WIHYNQALLRARNFGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 114 ~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
-+.|+||.++++++|++|.+.|+ .+|++|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 38899999999999999999998 56999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCc
Q psy2417 193 DDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PK 272 (391)
+.... . . . ... .. . ......++++++++|||||||.||
T Consensus 99 ~~~~~-~-~-------~-----~~~--------------------------~~-~-~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 99 LDQLK-L-S-------H-----PPP--------------------------LP-S-QGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred cCccc-c-c-------c-----CCC--------------------------CC-c-cccCCCCCCcEEEEeCCCCCCCCc
Confidence 76420 0 0 0 000 00 0 001235689999999999999999
Q ss_pred EEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-CHHhHHHHHHhcCCcEEe
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG-DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~-~~~~l~~~i~~~~~t~~~ 351 (391)
||++||+++++.+......+. +.+ +++++.+|++|.+|+...+.+|+.|+++++.+. +.........++++|++.
T Consensus 137 gV~~t~~~l~~~~~~~~~~~~---~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~ 212 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYFQ---LQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLS 212 (452)
T ss_pred EEEechHHHHHHHHHHHHHhc---CCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEE
Confidence 999999999988887777665 544 467889999999999877899999999998764 223223444578999999
Q ss_pred cChHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy2417 352 AVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 352 ~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~ 383 (391)
++|++++.+.+. ...++++||.+++||+..
T Consensus 213 ~vP~~l~~l~~~--~~~~l~~l~~i~~gG~~l 242 (452)
T PRK07445 213 LVPTQLQRLLQL--RPQWLAQFRTILLGGAPA 242 (452)
T ss_pred ehHHHHHHHHhh--ChhhhhcceEEEECCccC
Confidence 999999998763 223467899999998775
No 114
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=1.1e-30 Score=266.88 Aligned_cols=316 Identities=19% Similarity=0.180 Sum_probs=241.5
Q ss_pred hhhhhccccchhhhhhhhccccccccc----------------CCCCccCccCcccccCCC--CCcceeccCCCCCHHHH
Q psy2417 27 QNLALVGTNETMRLRFYYQSDRSSNLR----------------GRGREVVRVSKFFSGASE--GKFLSTLYDDVKTLYDA 88 (391)
Q Consensus 27 l~~~~~~~~~~l~~~~~y~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~tl~~~ 88 (391)
+.+.+... ++.+.|+|..++|++.+ ..+.......++...... .+-.....+...++++.
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~~~~~~~~~~~~~~~~i~~~ 232 (642)
T COG1020 155 LALAVVEG--GLRLSFDYARELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSEREVWNALAAPIPLRLTIHLL 232 (642)
T ss_pred eEEEEEeC--ceEEEEEeecccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHHhhccccccCCCccchHHHH
Confidence 55555555 89999999999999876 111111111111100000 01122233445789999
Q ss_pred HHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEE
Q psy2417 89 FRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVA 168 (391)
Q Consensus 89 l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vp 168 (391)
|..++...|++.|+.+.+ ..+||+|++.+++++|+.|.+.|+++++.|+++.+++++++++++|++++|+.+||
T Consensus 233 f~~~a~~~p~~~a~~~~~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 233 FEEQAATTPDAVALVRGG------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred HHHHHHhCCCceeEecCC------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 999999999999998875 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCC
Q psy2417 169 LYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMF 248 (391)
Q Consensus 169 l~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 248 (391)
+||.+|.+++.+++++++++.+++.... .......+ . +.++.. .........
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~--~~~~~~~~----~-~~~~~~---------------------~~~~~~~~~ 358 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHL--RVDDVGLP----G-LALDDA---------------------LSEIPDTDP 358 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEecccc--ccccccCC----c-cccccc---------------------cccCCccCc
Confidence 9999999999999999999999998431 00000000 0 111110 000000000
Q ss_pred CCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEE
Q psy2417 249 EEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSI 328 (391)
Q Consensus 249 ~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~v 328 (391)
......+++++|++|||||||.||||+++|+++.+.+.+....+. ++.+|+++...+++|+.+....+.++..|+++
T Consensus 359 ~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~---~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l 435 (642)
T COG1020 359 IPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFG---LDADDRVLALASLSFDASVFEIFGALLEGARL 435 (642)
T ss_pred ccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcC---CCcccEEeecCCcccchhHHHHHHHHhCCCEE
Confidence 012235689999999999999999999999999998888888877 89999999999999999999999999999999
Q ss_pred EEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhc---CchhHHHHHHHHH
Q psy2417 329 GYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQI---RPSFIKRLMFNMA 381 (391)
Q Consensus 329 v~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~---~~~slr~~~~gga 381 (391)
++.+. ++..+.+.+.++++|++..+|.++..+........ ....+|.+++||.
T Consensus 436 ~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe 495 (642)
T COG1020 436 VLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGE 495 (642)
T ss_pred EecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCC
Confidence 99864 89999999999999999999999999987622221 1224888888883
No 115
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.97 E-value=1.8e-30 Score=258.20 Aligned_cols=263 Identities=20% Similarity=0.209 Sum_probs=200.3
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
+.+||.||.++++++|++|.++|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhcccCccEEEEecCcchHHH-----HHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCC
Q psy2417 193 DDDSKCNQIIDRAPRCLKKIISIREVRMATM-----QRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGT 267 (391)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGS 267 (391)
+... ...+.+..+..+ .++..+....... ............|+++..... ......++++++|+|||||
T Consensus 90 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGt 163 (509)
T PRK12406 90 HADL-LHGLASALPAGV-TVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTSGT 163 (509)
T ss_pred ccch-hhhhhhhhhccc-ceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECCCC
Confidence 8753 333333222111 2222221110000 000001112344555432211 1123457899999999999
Q ss_pred CCCCcEEEeehhHHHH---HHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-CHHhHHHHHH
Q psy2417 268 TGNPKGVMLTHGNVIA---AISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG-DIKNLTEDMK 343 (391)
Q Consensus 268 TG~PKgV~~th~~l~~---~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~-~~~~l~~~i~ 343 (391)
||.||||+++|.+... ........++ +.+++++++.+|++|..+....+.++..|+++++.+. ++..+++.++
T Consensus 164 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 240 (509)
T PRK12406 164 TGHPKGVRRAAPTPEQAAAAEQMRALIYG---LKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIE 240 (509)
T ss_pred CCCCceEEEechhHHHHHHHHHhhhhhcC---CCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHH
Confidence 9999999997765443 3333444555 8889999999999999998888888999999998765 8999999999
Q ss_pred hcCCcEEecChHHHHHHHHHH---HHhcCchhHHHHHHHHHHHH
Q psy2417 344 TLKPTIMPAVPRLLNRMYDKV---MAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 344 ~~~~t~~~~~P~~l~~l~~~~---~~~~~~~slr~~~~gga~~~ 384 (391)
++++|++..+|+++..+++.. ....+++++|.+++||+...
T Consensus 241 ~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~ 284 (509)
T PRK12406 241 RHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCP 284 (509)
T ss_pred HcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCC
Confidence 999999999999999988642 23456779999999987653
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.97 E-value=1.8e-30 Score=253.12 Aligned_cols=231 Identities=20% Similarity=0.232 Sum_probs=189.7
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 116 HYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 116 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|++++|+++.++.+++..+++++++++++++..
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEE
Q psy2417 196 SKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVM 275 (391)
Q Consensus 196 ~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~ 275 (391)
.. .. . +. ...+.++................+++++++|||||||.||||+
T Consensus 81 ~~-~~-------~----~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~ 130 (436)
T TIGR01923 81 LE-EK-------D----FQ------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVP 130 (436)
T ss_pred cc-cc-------c----ee------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEE
Confidence 21 00 0 00 0111111111111111122345688999999999999999999
Q ss_pred eehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEecChH
Q psy2417 276 LTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 276 ~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
++|+++...+......++ +.++|++++.+|++|.+++...+.++..|+++++.+.. ..+++.+.++++|++..+|+
T Consensus 131 ~s~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~~~P~ 206 (436)
T TIGR01923 131 HTFRNHYASAVGSKENLG---FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHISLVPT 206 (436)
T ss_pred EehHHHHHHHHHHHhhcC---CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEEeHHH
Confidence 999999999888888887 89999999999999999998779999999999997653 48999999999999999999
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy2417 356 LLNRMYDKVMAQIRPSFIKRLMFNMAMG 383 (391)
Q Consensus 356 ~l~~l~~~~~~~~~~~slr~~~~gga~~ 383 (391)
++..+.+.... .+++|.+++||+..
T Consensus 207 ~l~~l~~~~~~---~~~l~~~~~~G~~~ 231 (436)
T TIGR01923 207 QLNRLLDEGGH---NENLRKILLGGSAI 231 (436)
T ss_pred HHHHHHhCcCC---CCceEEEEECCCCC
Confidence 99999875321 14677777777644
No 117
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.97 E-value=6.3e-30 Score=247.06 Aligned_cols=244 Identities=19% Similarity=0.245 Sum_probs=198.1
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 116 HYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 116 Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
||.||.+++++++++|.+ .|+++|++|+++++|+++++++++||++.|++++|+++.++.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred CcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEE
Q psy2417 195 DSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGV 274 (391)
Q Consensus 195 ~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV 274 (391)
.. ...+.. . ...++.++... ...................+++++|+|||||||.||+|
T Consensus 81 ~~-~~~~~~-~---~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v 138 (408)
T TIGR01733 81 AL-ASRLAG-L---VLPIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGV 138 (408)
T ss_pred ch-hhhccc-c---CCceEEechhh-----------------hhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEE
Confidence 62 111111 1 11122221100 00000000000011113578999999999999999999
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEE
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~ 350 (391)
.++|+++++........+. +.++|++++..|++|.+++...+.++..|+++++.+. .+..+.+.++++++|.+
T Consensus 139 ~~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 215 (408)
T TIGR01733 139 VVTHRSLVNLLAWLARRYG---LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVL 215 (408)
T ss_pred EeccHHHHHHHHHHHHhcC---CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEE
Confidence 9999999999988888777 8899999999999999999888999999999999865 26788999999999999
Q ss_pred ecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q psy2417 351 PAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 351 ~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k~ 386 (391)
.++|.+++.+.+... ..+++||.+++||+...+.
T Consensus 216 ~~~p~~~~~l~~~~~--~~~~~l~~v~~~g~~~~~~ 249 (408)
T TIGR01733 216 NLTPSLLALLAAALP--PALASLRLVILGGEALTPA 249 (408)
T ss_pred EeCHHHHHHHHHhhh--hcccCceEEEEeCccCCHH
Confidence 999999999988744 5567999999998877554
No 118
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=7.3e-30 Score=253.48 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=198.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
+.+||+||.+++++++++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhh---cccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCC
Q psy2417 193 DDDSKCNQIIDR---APRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTG 269 (391)
Q Consensus 193 ~~~~~~~~~~~~---~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG 269 (391)
+... ...+.+. ....++.++..+... .....|++...... .......+++++|+|||||||
T Consensus 90 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG 153 (502)
T PRK08276 90 SAAL-ADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP----DTPIADETAGADMLYSSGTTG 153 (502)
T ss_pred ccch-hhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCC----CCCCCCCCcceEEEECCCCCC
Confidence 8753 2222111 111234444432210 11234444432211 112235677999999999999
Q ss_pred CCcEEEeehhHHHHHHH--HHHHhhc-CCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-CHHhHHHHHHhc
Q psy2417 270 NPKGVMLTHGNVIAAIS--AALLQLS-DHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG-DIKNLTEDMKTL 345 (391)
Q Consensus 270 ~PKgV~~th~~l~~~~~--~~~~~~~-~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~-~~~~l~~~i~~~ 345 (391)
.||||+++|.++..... ....... ......++++++.+|++|.+++...+.++..|+++++.+. ++..+++.++++
T Consensus 154 ~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 233 (502)
T PRK08276 154 RPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERY 233 (502)
T ss_pred CCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHh
Confidence 99999999887654321 1111111 0013468899999999999999888889999999998865 899999999999
Q ss_pred CCcEEecChHHHHHHHHHHH---HhcCchhHHHHHHHHHHHHH
Q psy2417 346 KPTIMPAVPRLLNRMYDKVM---AQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 346 ~~t~~~~~P~~l~~l~~~~~---~~~~~~slr~~~~gga~~~k 385 (391)
++|++.++|+++..+.+... ...+++++|.+++||+...+
T Consensus 234 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~ 276 (502)
T PRK08276 234 RVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPV 276 (502)
T ss_pred CCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCH
Confidence 99999999999999887532 34567899999999986543
No 119
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=3e-28 Score=215.38 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=162.6
Q ss_pred HHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEE
Q psy2417 89 FRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIV 167 (391)
Q Consensus 89 l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~v 167 (391)
+..+++.+|+++|+++.+..+++.+.+||+|+.++++++|++|++ +|+++||+|+|+++|+++++++++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 567888999999998653211123679999999999999999998 7999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccC
Q psy2417 168 ALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKM 247 (391)
Q Consensus 168 pl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 247 (391)
|++ ++++++++++.+. ...+ . ..+.++.+......... .......+..|.+.........
T Consensus 82 p~n-------------~s~a~~~v~~~~~-~~~~-~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 141 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDR-LAAA-A----GSGEVVALSLDPLGRRV-AGELPPGVIDFAPEVRVHGDQF 141 (227)
T ss_pred eCC-------------CCCCCEEEeCcch-hhhc-c----cCCceEEEeccccccCC-CCCCCCcccchhhhhhccCCCC
Confidence 995 6899999998762 2221 1 11233333110000000 0000112245555444222211
Q ss_pred CCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCc
Q psy2417 248 FEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGG 326 (391)
Q Consensus 248 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~ 326 (391)
.++....++|++.|+||||+ +|++++... ...+ +.++|+++ .+|++|++|+... +.+|+.|+
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~---l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~ 204 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAG---LPPGDRVL-VLAWTDLEDFLATLLAPLAAGG 204 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcC---CCCCCeEE-ecCCCchHHHHHHHHHHhccCc
Confidence 11113467999999999985 677766554 3444 88999999 9999999999765 89999999
Q ss_pred EEEEeCC-CHHhHHHHHHhcCCc
Q psy2417 327 SIGYYSG-DIKNLTEDMKTLKPT 348 (391)
Q Consensus 327 ~vv~~~~-~~~~l~~~i~~~~~t 348 (391)
++++.+. ++..+++.|+++|||
T Consensus 205 t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 205 SLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred eEEEecCCCHHHHHHHHHhhcCC
Confidence 9999876 999999999999997
No 120
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.96 E-value=7.1e-29 Score=246.11 Aligned_cols=231 Identities=15% Similarity=0.135 Sum_probs=169.5
Q ss_pred ccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCc-----chhHHHhhccc-CccEEEEecCcc
Q psy2417 146 SQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDS-----KCNQIIDRAPR-CLKKIISIREVR 219 (391)
Q Consensus 146 ~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~-----~~~~~~~~~~~-~l~~ii~~~~~~ 219 (391)
++|++|+++++|||+++|+++||+++.++.+++.+++++++++++|++... ....+.+.... ..+.++......
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998641 01111111110 122232221110
Q ss_pred hHHHHHHhhCCceEEeHHHHHHhhhcc------CCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhc
Q psy2417 220 MATMQRARSRAIEIIRFDEIERVGAQK------MFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLS 293 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~ 293 (391)
.... ........|+++...+... ...+....++++++|+|||||||.||||++||+|++.........++
T Consensus 81 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~ 156 (499)
T PLN03051 81 PVAV----PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMD 156 (499)
T ss_pred ccCC----ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcC
Confidence 0000 0000123566654322110 00111235689999999999999999999999999877655555555
Q ss_pred CCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhc
Q psy2417 294 DHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQI 368 (391)
Q Consensus 294 ~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~ 368 (391)
+..+|++++.+|++|++++...+.+|+.|+++++.+. ++..+++.|++++||++.++|+++..|.+.. ....
T Consensus 157 ---~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~ 233 (499)
T PLN03051 157 ---IQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGL 233 (499)
T ss_pred ---CCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccC
Confidence 7889999999999999998766889999999998863 7889999999999999999999999988753 2345
Q ss_pred CchhHHHHHHHHHHH
Q psy2417 369 RPSFIKRLMFNMAMG 383 (391)
Q Consensus 369 ~~~slr~~~~gga~~ 383 (391)
++++||.+++||+..
T Consensus 234 ~~~~Lr~i~~gG~~~ 248 (499)
T PLN03051 234 DWSKLRVFASTGEAS 248 (499)
T ss_pred CchhheEEEecCCCC
Confidence 778999999998764
No 121
>KOG1175|consensus
Probab=99.96 E-value=1.8e-28 Score=238.29 Aligned_cols=296 Identities=17% Similarity=0.172 Sum_probs=224.9
Q ss_pred eeccCCCCCHH-HHHHHHHHh-cCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHH
Q psy2417 76 STLYDDVKTLY-DAFRKGAKE-SNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWI 153 (391)
Q Consensus 76 ~~~~~~~~tl~-~~l~~~~~~-~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i 153 (391)
.++.....+.. ..+.+.... .++.++.++.+...++...+||.|+.+++.++|..|.+.|+++||+|++++|+.+|++
T Consensus 56 ~w~~g~~ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ 135 (626)
T KOG1175|consen 56 KWFPGAFLNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAV 135 (626)
T ss_pred cccccchhhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHH
Confidence 33333333443 334444333 4899999998754444455999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcc--------hhHHHhh---ccc----CccEEEEecCc
Q psy2417 154 ITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSK--------CNQIIDR---APR----CLKKIISIREV 218 (391)
Q Consensus 154 ~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~--------~~~~~~~---~~~----~l~~ii~~~~~ 218 (391)
+++|||.++|++..++-..++++++...++++++++|++.+.-. ...+.+. ... ..+.+++.+..
T Consensus 136 ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 215 (626)
T KOG1175|consen 136 IAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN 215 (626)
T ss_pred HHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc
Confidence 99999999999999999999999999999999999999976510 0011111 110 01111111110
Q ss_pred chHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHH-HHHhhcCCCC
Q psy2417 219 RMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISA-ALLQLSDHRP 297 (391)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~ 297 (391)
....|++......... +..+...+|+.+|+|||||||.||||.+++....-.... ....+. +
T Consensus 216 -------------~d~~~~~~~~~a~~~~-~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d---~ 278 (626)
T KOG1175|consen 216 -------------RDLFWSLELKKASPEH-PCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFD---L 278 (626)
T ss_pred -------------ccccHHHHhhhcCCCC-CceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceecc---C
Confidence 1334555544333332 356678899999999999999999999998876655443 333444 8
Q ss_pred CCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC---CHHhHHHHHHhcCCcEEecChHHHHHHHHHH---HHhcCc
Q psy2417 298 KYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG---DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKV---MAQIRP 370 (391)
Q Consensus 298 ~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~---~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~---~~~~~~ 370 (391)
.++|++.+...+.++.+.+.. +++|++|+++++.+. ++..+++.++++++|+++..|.+++.|.+.. ....+.
T Consensus 279 q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~ 358 (626)
T KOG1175|consen 279 QPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSL 358 (626)
T ss_pred CCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcccccccccc
Confidence 999999999999999999998 789999999999864 8899999999999999999999999887652 234444
Q ss_pred hhHHHHHHHHHHHHHHHh
Q psy2417 371 SFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 371 ~slr~~~~gga~~~k~~~ 388 (391)
++||.+.+.|.+.++..+
T Consensus 359 ~sLk~~~S~Gepi~~~~~ 376 (626)
T KOG1175|consen 359 KSLRTCGSVGEPINPEAW 376 (626)
T ss_pred ceEEEEeecCccCCcchH
Confidence 679999999988766554
No 122
>KOG3628|consensus
Probab=99.83 E-value=1.4e-18 Score=173.06 Aligned_cols=262 Identities=11% Similarity=0.056 Sum_probs=209.7
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
.++.|+|+.+++.+||.+|+...+..+.+..++||+++..++.+++.+|...+ +++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 68999999999999999999998876677899999999999999999999875 88999999999999999999999999
Q ss_pred cCCeEEEccCCCCHH------HHHHHHHhcCccEEEEcCCcchhHHHhhccc-------CccEEEEecCcchHHHHHHhh
Q psy2417 162 YSMIIVALYDTLGPD------ACAFIINQAEISVLIVDDDSKCNQIIDRAPR-------CLKKIISIREVRMATMQRARS 228 (391)
Q Consensus 162 ~G~~~vpl~~~~~~~------~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~ 228 (391)
+|.+++|+.|..... .+..|++.+++..|++++. +..++..... .+..++..++....
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~--v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t------- 920 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQK--VLKLLRSREASAHVDQSAIPLILVLPKLPET------- 920 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHH--HHHHHhhhhHHHHhhhhcchhhhcccccchh-------
Confidence 999999999866543 6788999999999999986 3333332221 22333333332211
Q ss_pred CCceEEeHHHHHHhh--hccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEc
Q psy2417 229 RAIEIIRFDEIERVG--AQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISF 306 (391)
Q Consensus 229 ~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~ 306 (391)
|..-.... .....++....++.+||+.|.--++|.--||.++|.++++.++..-+... +.+..-++..
T Consensus 921 -------~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~---l~~~rpl~~~ 990 (1363)
T KOG3628|consen 921 -------IRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQ---LYKSRPLLGC 990 (1363)
T ss_pred -------hhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHc---cccCCceEEE
Confidence 00000000 01111223346788999999999999999999999999999999988887 8888888888
Q ss_pred CChHHHHHHHHH-HHHHHhCcEEEEeCC-----CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 307 LPLAHMLERTCE-SAMFLVGGSIGYYSG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 307 ~pl~h~~g~~~~-~~~L~~G~~vv~~~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
.+.+...|+..+ +...+.|...++.+. +|..|++.|+++++.-.+.+=..++...+.
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~ 1053 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKG 1053 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhc
Confidence 888888888877 889999999888754 899999999999999988888888877665
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.65 E-value=4.9e-16 Score=148.21 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=96.8
Q ss_pred CCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCC--CCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeC
Q psy2417 256 TDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPK--YSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYS 332 (391)
Q Consensus 256 ~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~ 332 (391)
+..++|+|||||||.||||+++|+++.+........++ +. +.|++++.+|++|.+|+... +.++..|+++++.+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~ 171 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILG---ERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA 171 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhC---cCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC
Confidence 55889999999999999999999999998887777665 43 34689999999999998655 78899999999876
Q ss_pred C-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q psy2417 333 G-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGS 384 (391)
Q Consensus 333 ~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~ 384 (391)
. ++..+++.+..+ |+++++|++++.+.+. ..+++++|. ++||+...
T Consensus 172 ~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~---~~~l~slr~-i~gGa~l~ 218 (386)
T TIGR02372 172 AAPASGIMRHARPG--DLIVGTPFIWEQLADL---DYRLPGVVG-VSSGAPST 218 (386)
T ss_pred CCChHHHHHhhccC--CEEEECcHHHHHHHhh---CcCCCccee-EecCCCCC
Confidence 5 777888777643 8999999999999764 244567765 56666543
No 124
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.62 E-value=1e-15 Score=145.55 Aligned_cols=128 Identities=22% Similarity=0.214 Sum_probs=104.3
Q ss_pred CCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 253 PKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 253 ~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
+.++++++|+|||||||.||||+++|+++.+.+...... +...++++..+|++|++++...+.+++.|+++++..
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~-----~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~ 106 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR-----LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELD 106 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc-----cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecC
Confidence 457899999999999999999999999999887765543 345678999999999999988889999999988732
Q ss_pred ----CCHHhHHHHHHhcC--CcEEecChHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy2417 333 ----GDIKNLTEDMKTLK--PTIMPAVPRLLNRMYDKVMAQIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 333 ----~~~~~l~~~i~~~~--~t~~~~~P~~l~~l~~~~~~~~~~~slr~~~~gga~~~k 385 (391)
.++..+++.+++++ .++...+|..+..+........+++++|.+++||+....
T Consensus 107 ~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~ 165 (358)
T PRK07824 107 VSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPA 165 (358)
T ss_pred cCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCH
Confidence 28899999999998 566778898888776543333456789989988876543
No 125
>KOG1178|consensus
Probab=99.55 E-value=1.1e-14 Score=149.24 Aligned_cols=257 Identities=17% Similarity=0.143 Sum_probs=175.3
Q ss_pred CCCCHHHHHHHHHHhcCCCceEEEeec--CCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 81 DVKTLYDAFRKGAKESNNGRCLGWRQN--ISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 81 ~~~tl~~~l~~~~~~~pd~~al~~~~~--~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
-..++.+.+++.+...|...+..+... ..+....+||++....++.+++.|...|...|+.|++++..+.++++..++
T Consensus 34 ~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~ 113 (1032)
T KOG1178|consen 34 FMGTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFA 113 (1032)
T ss_pred hhcchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeee
Confidence 356888899999999999998877653 234467899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEccCCCC----HHH---HHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCc
Q psy2417 159 AYCYSMIIVALYDTLG----PDA---CAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAI 231 (391)
Q Consensus 159 ~~~~G~~~vpl~~~~~----~~~---l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (391)
++++|..+++++|.++ +++ +++.+.....+++.-.. .......... . ...+
T Consensus 114 ~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~--i~~~~~~~~~----~----------------~~sv 171 (1032)
T KOG1178|consen 114 VLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLN--IIDILLNSLF----P----------------KLSV 171 (1032)
T ss_pred hhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhh--hHHHHhhccc----c----------------ccch
Confidence 9999999999999999 221 11111111111111000 0000000000 0 0000
Q ss_pred eEEeHHHHHHhhhccCC-CCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChH
Q psy2417 232 EIIRFDEIERVGAQKMF-EEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLA 310 (391)
Q Consensus 232 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 310 (391)
... -+.+......... ......++..+++.||||+||.||||.-+|..+.+...+....+. ...+++.-....++
T Consensus 172 ~~~-~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~---~t~s~~~~~~~~~~ 247 (1032)
T KOG1178|consen 172 ETI-ADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFP---PTGSDRFTFKTSVY 247 (1032)
T ss_pred hhc-cchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCC---cCccchhhhhheee
Confidence 000 0011111111111 112335777999999999999999999999999999999888876 77777764444443
Q ss_pred HHHHHHHHH-HHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 311 HMLERTCES-AMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 311 h~~g~~~~~-~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
++-...... ..|..|+.+..+.. .+..+.+.+.+++++..+.+|++.+.++..
T Consensus 248 ~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~ 305 (1032)
T KOG1178|consen 248 FDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAI 305 (1032)
T ss_pred cccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhh
Confidence 444444444 44555555554432 478999999999999999999998887654
No 126
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.40 E-value=4.5e-13 Score=130.24 Aligned_cols=129 Identities=16% Similarity=0.179 Sum_probs=98.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHH---HhhcCCCCCCCCEEEEcCChHHHHHHH-HHHHHHHhCcEEE
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAAL---LQLSDHRPKYSDVLISFLPLAHMLERT-CESAMFLVGGSIG 329 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~L~~G~~vv 329 (391)
..+++++++|||||||.||+|.++|.++........ ..++ +.++|++++..+..+..+.. ..+..+..|++++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 149 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAG---GRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVV 149 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcC---CCCCcEEEEccCccccchhHHHHHHHHHcCcEEE
Confidence 456789999999999999999999999876644332 2345 78899998877665433333 3356788899988
Q ss_pred EeCC-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-hcC--chhHHHHHHHHHHHHH
Q psy2417 330 YYSG-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-QIR--PSFIKRLMFNMAMGSK 385 (391)
Q Consensus 330 ~~~~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-~~~--~~slr~~~~gga~~~k 385 (391)
..+. ++..+++.|++++||+++++|+++..|++.... ..+ ..++|.+++||+....
T Consensus 150 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~ 209 (422)
T TIGR02155 150 PISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTN 209 (422)
T ss_pred ecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCH
Confidence 7654 789999999999999999999999999876432 222 2478888888876543
No 127
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.24 E-value=1.7e-11 Score=119.80 Aligned_cols=127 Identities=24% Similarity=0.145 Sum_probs=98.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhh---cCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEE
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQL---SDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIG 329 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv 329 (391)
..++++.|.|||||||.||+|.+||.++..........+ + +.++|+++...|+.+..+.... +.++..|++++
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G---~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi 160 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQG---FTAGDRMVICASYGMNVGANTMTLAAREVGMSII 160 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcC---CCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEE
Confidence 456789999999999999999999999987765544433 5 8899999999998887766555 56778888875
Q ss_pred EeCCCHHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-hcC--chhHHHHHHHHHHHH
Q psy2417 330 YYSGDIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-QIR--PSFIKRLMFNMAMGS 384 (391)
Q Consensus 330 ~~~~~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-~~~--~~slr~~~~gga~~~ 384 (391)
.. +.....++.|+++++|.+..+|+.+..+++.... ..+ ..++|.+++||....
T Consensus 161 ~~-~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~ 217 (445)
T TIGR03335 161 PE-GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFA 217 (445)
T ss_pred cC-CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCC
Confidence 43 3345668899999999999999998888776432 222 358999999887543
No 128
>KOG3628|consensus
Probab=99.17 E-value=9.8e-11 Score=117.99 Aligned_cols=259 Identities=15% Similarity=0.155 Sum_probs=185.8
Q ss_pred cCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHH-HHHhCCCCCCCeEEEEccCC--HHHHHH
Q psy2417 79 YDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGS-GLLGLGVNPGSFVGIYSQNC--PEWIIT 155 (391)
Q Consensus 79 ~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~-~L~~~gv~~g~~V~i~~~~s--~e~i~~ 155 (391)
......+..+++.+-.+++...|.++.+..+. ...+||..+..++.++|+ .|-+-|..++++|.++...+ +|+++.
T Consensus 90 ~~a~~d~~avl~~~~nhs~~~ta~i~id~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~is 168 (1363)
T KOG3628|consen 90 MMALTDIIAVLRYRRNHSATSTAHICIDKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLIS 168 (1363)
T ss_pred hhhhcchHHHHHhhccCCCCCceEEEEcCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhh
Confidence 34455677888888889999999999887555 789999999999999999 67778999999999999865 899999
Q ss_pred HHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcchHHHHHHhhCCce-EE
Q psy2417 156 EQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVRMATMQRARSRAIE-II 234 (391)
Q Consensus 156 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~-~~ 234 (391)
.++|...|.+.+|+.+..+.+++..+++....+++++..+..........+ ....+...+.....++ ..
T Consensus 169 l~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~----------~s~~k~v~~w~t~~~k~~~ 238 (1363)
T KOG3628|consen 169 LFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSP----------VSLAKAVAWWKTNDFKGNY 238 (1363)
T ss_pred hccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCc----------ccHHHHHHhhhccccccee
Confidence 999999999999999999999999999999999999877531111111000 0001111111111111 11
Q ss_pred eHHHHHHhhhccCCCCCCCCCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC-----------------CC
Q psy2417 235 RFDEIERVGAQKMFEEVPPKPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH-----------------RP 297 (391)
Q Consensus 235 ~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-----------------~~ 297 (391)
..+. ...+...-. ..||-||++++|.--||+++|. +..+.+.+....... ..
T Consensus 239 ~~~k---------~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~ 307 (1363)
T KOG3628|consen 239 TKDK---------IKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPV 307 (1363)
T ss_pred ehhh---------ccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcccc
Confidence 1110 001111222 8999999999999999999999 555544332221100 13
Q ss_pred CCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC----CHHhHHHHHHhcCCcEEecChHHHHH
Q psy2417 298 KYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG----DIKNLTEDMKTLKPTIMPAVPRLLNR 359 (391)
Q Consensus 298 ~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~----~~~~l~~~i~~~~~t~~~~~P~~l~~ 359 (391)
..+++++..+..+-..|++.+ +.+|++|.|...++. .|..+...+.++|.+++..=-..+.+
T Consensus 308 ~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq 374 (1363)
T KOG3628|consen 308 PSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQ 374 (1363)
T ss_pred CcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCc
Confidence 567788888888888888877 899999999998875 67788899999999998765444443
No 129
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=98.52 E-value=2.1e-07 Score=88.06 Aligned_cols=135 Identities=19% Similarity=0.168 Sum_probs=98.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHH-HHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHML-ERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~-g~~~~~~~L~~G~~vv~~~ 332 (391)
..++...|--||||||+|+-+.++...+-.....+...+...-...+|++..+.-..... |+..-+++--.|++++=..
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 445666788899999999999999998887766665554322277888877665532222 2222244444676666444
Q ss_pred C-CHHhHHHHHHhcCCcEEecChHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHHHh
Q psy2417 333 G-DIKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMAQ---IRPSFIKRLMFNMAMGSKENE 388 (391)
Q Consensus 333 ~-~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~~---~~~~slr~~~~gga~~~k~~~ 388 (391)
+ +.+.-++.|..+++|++.++|+.+..|++..... .+..+||.+++|+.+.+++-+
T Consensus 168 ~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R 227 (438)
T COG1541 168 GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMR 227 (438)
T ss_pred CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHH
Confidence 4 7889999999999999999999999999986544 334599999999888776544
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=97.27 E-value=0.0011 Score=64.18 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=75.4
Q ss_pred ceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcE-EEEeC--CC
Q psy2417 258 LCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGS-IGYYS--GD 334 (391)
Q Consensus 258 ~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~-vv~~~--~~ 334 (391)
-..+.-||||||.|-.+..+...................+..++++..++.-.. ..+..+.+... +-+.+ .+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-----~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-----NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-----hHHHHHHhccceeeecCCCcC
Confidence 445667999999999999999877544332222222111445556555531100 11122222211 22222 37
Q ss_pred HHhHHHHHHhcCCcEEecChHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHH
Q psy2417 335 IKNLTEDMKTLKPTIMPAVPRLLNRMYDKVMA-QIRPSFIKRLMFNMAMGSK 385 (391)
Q Consensus 335 ~~~l~~~i~~~~~t~~~~~P~~l~~l~~~~~~-~~~~~slr~~~~gga~~~k 385 (391)
.+..++.|.+++|+++.+.|+.+..|++...+ ..+. ++|.++++|.....
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~-~~k~ii~~~E~l~~ 226 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTI-KPKKVISVAEVLEP 226 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCC-CceEEEEccCCCCH
Confidence 88999999999999999999999999987443 3233 67777777765544
No 131
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.05 E-value=0.17 Score=48.54 Aligned_cols=106 Identities=14% Similarity=0.002 Sum_probs=80.7
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCH--HHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccE
Q psy2417 112 YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCP--EWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISV 189 (391)
Q Consensus 112 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~--e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 189 (391)
..-+|+.++...+..+|+.|...|..+||+|.++..-+. .-.-..+|+.+.|+.++|+.+ -.-++...++++.++.+
T Consensus 107 ~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tv 185 (438)
T COG1541 107 VFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTV 185 (438)
T ss_pred eeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcE
Confidence 566999999999999999999999999999988876111 116778899999999999988 44577788999999999
Q ss_pred EEEcCCcchhHHH---hhc---cc--CccEEEEecCcc
Q psy2417 190 LIVDDDSKCNQII---DRA---PR--CLKKIISIREVR 219 (391)
Q Consensus 190 vi~~~~~~~~~~~---~~~---~~--~l~~ii~~~~~~ 219 (391)
|.+.... ...+. ... +. +++.++.-.+.-
T Consensus 186 I~~tps~-~l~lae~~~~~G~~~~~~~lk~~i~gaE~~ 222 (438)
T COG1541 186 IAATPSY-LLYLAEEAEEEGIDPDKLSLKKGIFGAEPW 222 (438)
T ss_pred EEEChHH-HHHHHHHHHHcCCChhhcceeEEEEecccC
Confidence 9998862 22222 222 11 677777765443
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=90.22 E-value=5.5 Score=37.90 Aligned_cols=132 Identities=12% Similarity=0.165 Sum_probs=69.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCC-CCCC-CCEEEEcCChHH---HHHHH--HHHHHHHhCc
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDH-RPKY-SDVLISFLPLAH---MLERT--CESAMFLVGG 326 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~~~-~d~~l~~~pl~h---~~g~~--~~~~~L~~G~ 326 (391)
..+++..++-||||||.|--+.+.+..+......+...+... .... .-.++...|-.. .++.. .....+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345677888899999998666666666665554444333211 0111 223333334321 11111 1123344455
Q ss_pred EEEEeCC---CHHhHHHHH----HhcCCcEEecChHHHHHHHHHHH-HhcC--chhHHHHHHHHHHHHHH
Q psy2417 327 SIGYYSG---DIKNLTEDM----KTLKPTIMPAVPRLLNRMYDKVM-AQIR--PSFIKRLMFNMAMGSKE 386 (391)
Q Consensus 327 ~vv~~~~---~~~~l~~~i----~~~~~t~~~~~P~~l~~l~~~~~-~~~~--~~slr~~~~gga~~~k~ 386 (391)
. .+..+ |...+.+.+ .+.++..++..|.++-.+..... .... +++=-.++-||+++.+.
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~ 235 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRR 235 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccc
Confidence 5 33333 566555544 45678999999987777766533 2222 22111356688887654
No 133
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=85.99 E-value=6.2 Score=38.69 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=62.8
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHH--HHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccE
Q psy2417 112 YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPE--WIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISV 189 (391)
Q Consensus 112 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e--~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 189 (391)
...+|.+++...+...+..+...|+.+|+++.++.+-+.. .....+++...|+.++|... .+....++++.++.+
T Consensus 103 ~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~ 179 (445)
T TIGR03335 103 SFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTG 179 (445)
T ss_pred eeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCE
Confidence 3568999999999999999988999999999998875542 22445778899998877653 245577889999998
Q ss_pred EEEcCC
Q psy2417 190 LIVDDD 195 (391)
Q Consensus 190 vi~~~~ 195 (391)
+++...
T Consensus 180 l~~~ps 185 (445)
T TIGR03335 180 IVASVF 185 (445)
T ss_pred EEECHH
Confidence 887554
No 134
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=85.87 E-value=0.1 Score=38.44 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=26.3
Q ss_pred CCCccccchhhcchhhhhccccchhhhhhhhccccccccc
Q psy2417 14 PVDLNNQSEIIREQNLALVGTNETMRLRFYYQSDRSSNLR 53 (391)
Q Consensus 14 ~~~~~~qs~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~~ 53 (391)
++.+.......+ |.|.+.+.++++++.|+|++++|++.+
T Consensus 49 ~~~~~~~~~~~D-L~l~~~~~~~~l~~~~~Y~~~lf~~~t 87 (91)
T PF13745_consen 49 PIPLENGGAKFD-LTLEVREDGDGLRLQLEYNTDLFSEET 87 (91)
T ss_dssp E-SS--SB-SSS-EEEEEEE-SS-EEEEEEEETTT--HHH
T ss_pred Eeeccccceeee-EEEEEEecCCeEEEEEEEEhHhCCHHH
Confidence 444555666665 999999999999999999999998865
No 135
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=84.07 E-value=7.7 Score=37.59 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=64.0
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCH--HHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccE
Q psy2417 112 YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCP--EWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISV 189 (391)
Q Consensus 112 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~--e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 189 (391)
...+|..++......++..+...|+.+|+++......+. ......++....|+..+++.+.. .+.+...|++.++.+
T Consensus 92 ~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~ 170 (422)
T TIGR02155 92 VVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDI 170 (422)
T ss_pred EeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCE
Confidence 345688888777777888888889999999877655432 22233567888999999988765 578889999999999
Q ss_pred EEEcCC
Q psy2417 190 LIVDDD 195 (391)
Q Consensus 190 vi~~~~ 195 (391)
+++...
T Consensus 171 l~~~Ps 176 (422)
T TIGR02155 171 IMVTPS 176 (422)
T ss_pred EEEcHH
Confidence 998775
No 136
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=83.97 E-value=12 Score=34.14 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCC----CHHHHHHHHHhcCccEEEEcCCcc
Q psy2417 122 LRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTL----GPDACAFIINQAEISVLIVDDDSK 197 (391)
Q Consensus 122 ~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~----~~~~l~~il~~~~~~~vi~~~~~~ 197 (391)
-|+-.||..|++.| -.|.+++.+....... .+...|..+..++-.. ..+++..++++.+++++|+|....
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 57889999998764 3566776665554433 3467888777775432 244688899999999999998643
Q ss_pred hhHHHhhcccCccEEEEecCc
Q psy2417 198 CNQIIDRAPRCLKKIISIREV 218 (391)
Q Consensus 198 ~~~~~~~~~~~l~~ii~~~~~ 218 (391)
........+.....++++|+.
T Consensus 92 ~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CHHHHHHHHHhCCeEEEEecC
Confidence 333333333334467777764
No 137
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=80.06 E-value=1.9 Score=43.23 Aligned_cols=54 Identities=22% Similarity=0.163 Sum_probs=35.0
Q ss_pred CceEEeHHHHHHhhhcc-CCCCCCCCCCCceEEEecCCCCCC-CcEEEeehhHHHH
Q psy2417 230 AIEIIRFDEIERVGAQK-MFEEVPPKPTDLCTICYTSGTTGN-PKGVMLTHGNVIA 283 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~a~i~~TSGSTG~-PKgV~~th~~l~~ 283 (391)
.+.+.+|+++...-... ........++.+.+...||||||. ||-+.+|...+..
T Consensus 53 ~VPi~~Yed~~pyIeR~~~Ge~~vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 53 RVPITDYEDYRPYIERIAEGEENVLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp HS--BEHHHHHHHHHHHHTT--CCTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred hCCCccHHHHHHHHHHHhcCCCCCCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 44567888775432211 111224567789999999999999 9999999998765
No 138
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=79.64 E-value=14 Score=35.29 Aligned_cols=90 Identities=16% Similarity=0.112 Sum_probs=66.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.|+.+|++. =.+..+|+..+...+......+....+..+|++....+-+..+ +...++++..|+..+..+.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 577788877 2346789999988877666654322378899988888875422 3344788999999998865
Q ss_pred --CHHhHHHHHHhcCCcEEec
Q psy2417 334 --DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~ 352 (391)
....+...+++.++.+++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 7889999999999999996
No 139
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=79.25 E-value=13 Score=32.66 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=44.5
Q ss_pred HhCCCCCCCeEEEEccCCH--HHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCc
Q psy2417 132 LGLGVNPGSFVGIYSQNCP--EWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEI 187 (391)
Q Consensus 132 ~~~gv~~g~~V~i~~~~s~--e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~ 187 (391)
...|+.++|++. .+|-.. -+...+++.+..|+..|.+ +.+.++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567889999999 888553 3445789999999998887 69999999999988765
No 140
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=74.45 E-value=2.1 Score=43.43 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=36.0
Q ss_pred CceEEeHHHHHHhhhccCCC-CC-CCCCCCceEEEecCCCC-CCCcEEEeehhHHH
Q psy2417 230 AIEIIRFDEIERVGAQKMFE-EV-PPKPTDLCTICYTSGTT-GNPKGVMLTHGNVI 282 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~a~i~~TSGST-G~PKgV~~th~~l~ 282 (391)
.+.+.+|+++...-...... .. ...++.+.+..-||||| |.+|-+.+|...+-
T Consensus 72 ~VPv~~Yedl~pyIeRi~~Ge~~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 72 KVPVVTYEDLKTEIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred hCCCccHHHhHHHHHHHHcCCCCceeCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 45567777765432221111 11 24678888999999999 89999999996664
No 141
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=73.87 E-value=32 Score=34.49 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=70.1
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++..- ++.++...+|...+...+..+...+....+.++|++...++-+..+ ....++++..|+..+..+.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 35677776533 2334446789999988776666654322288899999998876654 3344788899999886654
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
..+.+...+...++..++....
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 6788899999999999887654
No 142
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=71.66 E-value=5.9 Score=40.18 Aligned_cols=55 Identities=16% Similarity=0.247 Sum_probs=36.4
Q ss_pred CceEEeHHHHHHhhhccCC-CCCC-CCCCCceEEEecCCCCC-CCcEEEeehhHHHHH
Q psy2417 230 AIEIIRFDEIERVGAQKMF-EEVP-PKPTDLCTICYTSGTTG-NPKGVMLTHGNVIAA 284 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~~~-~~~~-~~~~~~a~i~~TSGSTG-~PKgV~~th~~l~~~ 284 (391)
.+.+.+|+++...-..... .... ..++.+.+..-|||||| .+|-+.+|+..+-..
T Consensus 61 ~VPv~~Yedl~pyI~Ri~~Ge~~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~ 118 (606)
T PLN02247 61 KVPVVNYEDIKPCIERIANGESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRK 118 (606)
T ss_pred hCCCccHHHhHHHHHHHHcCCCCceeCCCCcceeeccCCCCCCceeEeeccHHHHHHH
Confidence 4567777776543222111 1112 23677889999999995 899999999876543
No 143
>PLN03102 acyl-activating enzyme; Provisional
Probab=70.57 E-value=48 Score=33.63 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=69.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+. . +-.+|.+.+...+..+...+....+.++|++...+|-.-.+-. ..++++..|+.++..+.
T Consensus 27 ~p~~~Al~~--~-------~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~-~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 27 YPNRTSIIY--G-------KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYE-MHFAVPMAGAVLNPINT 96 (579)
T ss_pred CCCCeEEEE--C-------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHH-HHHHHHhcCcEEeeccc
Confidence 466677653 1 1258999998877666665432228899999999986543222 33788888988887665
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
.++.+...++..+++.++.-+.....+
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 789999999999999999877655443
No 144
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.52 E-value=51 Score=32.47 Aligned_cols=97 Identities=9% Similarity=-0.033 Sum_probs=69.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. .+..+|.+.+...+..+...+....+..+|++..+.+-.-.+ ....++++..|+..+..+.
T Consensus 18 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~-~~~~la~~~~G~~~v~l~~ 87 (513)
T PRK07656 18 FGDKEAYVF---------GDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHW-VIAALGALKAGAVVVPLNT 87 (513)
T ss_pred CCCCeEEEe---------CCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHhcCeEEEecCc
Confidence 356666655 123589999988776666654322378899998888765432 2333688899998887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+.+.+++.++..++..+.....+
T Consensus 88 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 116 (513)
T PRK07656 88 RYTADEAAYILARGDAKALFVLGLFLGVD 116 (513)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhHHHH
Confidence 678889999999999999888766544
No 145
>PRK09274 peptide synthase; Provisional
Probab=70.36 E-value=60 Score=32.49 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=68.2
Q ss_pred CCCCceEEEecCCCC-CCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTT-GNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGST-G~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.+|.+....++. +..+-..+|.+.+...+......+....+.++|++...++-+..+-. ..++++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~-~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA-LTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH-HHHHHHHcCeEEEEcC
Confidence 456677654333322 22333368999998877666665532237899999998876543332 3378889999888765
Q ss_pred C--CHHhHHHHHHhcCCcEEecCh
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P 354 (391)
. ..+.+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 5 677888899999999988755
No 146
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=69.54 E-value=58 Score=32.10 Aligned_cols=86 Identities=9% Similarity=-0.022 Sum_probs=64.4
Q ss_pred eehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecC
Q psy2417 276 LTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAV 353 (391)
Q Consensus 276 ~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~ 353 (391)
+|.+.+...+......+....+..++++....|-+..+ +...++++..|+..+..+. ....+...+++.++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEY-LEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 89999887776665544322378899999988876632 2334788999998888765 67889999999999999988
Q ss_pred hHHHHHHHH
Q psy2417 354 PRLLNRMYD 362 (391)
Q Consensus 354 P~~l~~l~~ 362 (391)
......+.+
T Consensus 111 ~~~~~~~~~ 119 (521)
T PRK06187 111 SEFVPLLAA 119 (521)
T ss_pred chHHHHHHH
Confidence 877665533
No 147
>PRK08316 acyl-CoA synthetase; Validated
Probab=67.92 E-value=67 Score=31.73 Aligned_cols=87 Identities=14% Similarity=-0.087 Sum_probs=65.8
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|...+...+......+....+.++|++....+-+.. .+...++++..|+..+..+. ....+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 568999998877666665443337889999988876654 33344788999988887764 678888999999999999
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8887766654
No 148
>PRK07788 acyl-CoA synthetase; Validated
Probab=67.07 E-value=48 Score=33.21 Aligned_cols=85 Identities=13% Similarity=-0.092 Sum_probs=64.5
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|.+.+...+..+...+....+.++|++...++-+- --+...++++..|+.++..+. ..+.+...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 6899999887766666553223788999988876543 222334789999999998865 7789999999999999998
Q ss_pred ChHHHHHH
Q psy2417 353 VPRLLNRM 360 (391)
Q Consensus 353 ~P~~l~~l 360 (391)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 88776655
No 149
>PRK08315 AMP-binding domain protein; Validated
Probab=67.00 E-value=53 Score=32.92 Aligned_cols=81 Identities=11% Similarity=-0.024 Sum_probs=61.7
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|++.+...+..+...+....+.++|++....+-...+ +...++++..|+..+..+. ....+...+++.+++.++
T Consensus 42 ~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 120 (559)
T PRK08315 42 LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEW-VLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALI 120 (559)
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEE
Confidence 4589999988777666655322378899998888766433 3445899999999988765 678899999999999988
Q ss_pred cChH
Q psy2417 352 AVPR 355 (391)
Q Consensus 352 ~~P~ 355 (391)
..+.
T Consensus 121 ~~~~ 124 (559)
T PRK08315 121 AADG 124 (559)
T ss_pred Eecc
Confidence 7654
No 150
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=66.97 E-value=76 Score=32.74 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=69.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.... .| ....+|.+.+...+..+...+....+.++|++..++|-+-.+ +...++++..|+..+.+..
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeCC
Confidence 356777665322 22 135799999988876666554322288999999999865433 3334788999998887755
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.+..+...++..++.+++....
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccc
Confidence 6788999999999999887654
No 151
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=65.93 E-value=12 Score=31.90 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=29.9
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q psy2417 112 YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGI 144 (391)
Q Consensus 112 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i 144 (391)
...+||.++.+.+..+|..+.+-|..|...|+|
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 478999999999999999999999999877766
No 152
>PLN03052 acetate--CoA ligase; Provisional
Probab=65.31 E-value=88 Score=32.93 Aligned_cols=101 Identities=13% Similarity=0.100 Sum_probs=70.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.-..|.-|.+ ...+|.+.+...+..+...+....+.++|++..++|.+-.+- ...++++..|+..+.+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~v-ia~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAV-IIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHcCCEEEeeCC
Confidence 467777665433322222 356899999887766655443222889999999999755333 234788889998887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
.++.+...+++.++.+++.....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 78899999999999999887654
No 153
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=65.30 E-value=68 Score=32.21 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=69.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++.. +..+|+..+...+..+...+....+.++|++...++-+..+-. ..++++..|+..+..+.
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~-~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPV-AIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHH-HHHHHHhcCeEEeccCc
Confidence 3566676642 2478999998887766665432237889999888876554333 33788899999887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+++.+++.++........+
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 134 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFATTV 134 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHHHH
Confidence 678899999999999988776654433
No 154
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=65.21 E-value=75 Score=32.30 Aligned_cols=99 Identities=7% Similarity=0.018 Sum_probs=71.1
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.- +-.+|+..+...+......+....+.++|++...++-+..+ +...++++..|+..+..+.
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 4666776641 23589999988776665554322278899999888766544 3344788889998887755
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRMYD 362 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l~~ 362 (391)
....+...+++.++..++........+.+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 150 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAFEE 150 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 67788899999999999988876665543
No 155
>PLN02246 4-coumarate--CoA ligase
Probab=65.07 E-value=77 Score=31.62 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=68.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++.. . ++-.+|+..+...+..+...+....+.++|++..+++-+.. .....++++..|+..+..+.
T Consensus 36 ~~~~~a~~~~---~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDG---A----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPE-FVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEec---C----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHHcCEEEecCCC
Confidence 4666776532 1 23468999998777666655432227889999988876532 22233788888888887655
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...++..++..++........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 778889999999999988877665544
No 156
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=64.80 E-value=85 Score=32.23 Aligned_cols=98 Identities=10% Similarity=0.074 Sum_probs=70.6
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.... . ......+|++.+...+..+...+....+.++|++...+|-+-.+-. ..++++..|+..+....
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~-~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAV-AMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCEEEecCC
Confidence 467788765321 1 1135679999998887777665532237899999999886554333 33788899999887755
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.+..+...++..++..++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 7889999999999999987654
No 157
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.42 E-value=1.3e+02 Score=31.12 Aligned_cols=88 Identities=13% Similarity=-0.042 Sum_probs=66.0
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|.+.+...+..+...+....+.++|++...++-+-.+-. ..++++..|+.++.... .++.+...++..++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~-~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLI-VDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 447999888877666554422228899999988886654332 23788889999887654 788999999999999999
Q ss_pred cChHHHHHHHH
Q psy2417 352 AVPRLLNRMYD 362 (391)
Q Consensus 352 ~~P~~l~~l~~ 362 (391)
..+..+..+..
T Consensus 156 ~~~~~~~~~~~ 166 (651)
T PLN02736 156 CVPQTLNTLLS 166 (651)
T ss_pred ECHHHHHHHHH
Confidence 98887766544
No 158
>KOG1176|consensus
Probab=64.25 E-value=76 Score=31.99 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=72.5
Q ss_pred EEEeehhHHHHHHHHHHHhhcCC--CCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCc
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDH--RPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPT 348 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t 348 (391)
|..+|++.+...+......+... .+..+|++...+|-+..+... .++++..|+.+.-... +..++...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 88999999998887777666421 257799999999987655443 3688899998887654 889999999999999
Q ss_pred EEecChHHHHHHHHH
Q psy2417 349 IMPAVPRLLNRMYDK 363 (391)
Q Consensus 349 ~~~~~P~~l~~l~~~ 363 (391)
+++.....+..+.+.
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999998888665
No 159
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.06 E-value=71 Score=32.21 Aligned_cols=97 Identities=10% Similarity=0.020 Sum_probs=69.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.. + -.+|+..+...+......+....+..+|++..++|-+..+- ...++++..|+..+..+.
T Consensus 45 ~p~~~a~~~~-----~----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 114 (573)
T PRK05605 45 FGDRPALDFF-----G----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHI-VAFYAVLRLGAVVVEHNP 114 (573)
T ss_pred CCCCeEEEeC-----C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCcEEeecCc
Confidence 3566766542 1 24899999887766666543222788999999888765532 334788889998887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+.+.++..++.....+..+
T Consensus 115 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 115 LYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred CCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 788999999999999999877766554
No 160
>PRK12583 acyl-CoA synthetase; Provisional
Probab=63.71 E-value=1.2e+02 Score=30.37 Aligned_cols=97 Identities=10% Similarity=0.055 Sum_probs=67.3
Q ss_pred cCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccC--CHHHHHHHHHHHhcCCeEEEcc
Q psy2417 96 SNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQN--CPEWIITEQGAYCYSMIIVALY 170 (391)
Q Consensus 96 ~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~--s~e~i~~~lA~~~~G~~~vpl~ 170 (391)
.++.+|.+.... .+.+ ...+|++.+...+..+... .|+++++++....+- ....+..+++.+..|+.++...
T Consensus 199 ~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 199 DRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 455566554432 2222 4678999887666655544 478889988777663 3455667788888998877545
Q ss_pred CCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 171 DTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 171 ~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
....++.+...+++.++..++....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHH
Confidence 5677888899999999998877654
No 161
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=63.56 E-value=1.1e+02 Score=29.92 Aligned_cols=96 Identities=9% Similarity=0.001 Sum_probs=70.0
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.|+.+|++.. .-.+|+..+...+......+....+.++|++..++|-+..+ +...++++..|+..+..+.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4677776532 14689999988776666554332378899999998877654 4445789999999998765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNR 359 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~ 359 (391)
.+..+...+++.++..+.........
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 112 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEAK 112 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhHH
Confidence 77888899999999988776654443
No 162
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=63.48 E-value=63 Score=32.40 Aligned_cols=87 Identities=13% Similarity=-0.018 Sum_probs=67.2
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|...+...+......+....+.+++++....|-...+ +...++++..|+..+..+. ....+...+++.+++.++
T Consensus 45 ~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~ 123 (542)
T PRK06155 45 TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLV 123 (542)
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEE
Confidence 3689998888877776655322378899999888876655 3445789999999887765 788999999999999999
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
..+..+..+.
T Consensus 124 ~~~~~~~~~~ 133 (542)
T PRK06155 124 VEAALLAALE 133 (542)
T ss_pred EChhhHHHHH
Confidence 9887766654
No 163
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=63.41 E-value=94 Score=30.74 Aligned_cols=102 Identities=8% Similarity=-0.045 Sum_probs=70.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.-.. .|. .-.+|...+...+......+....+.++|++..+.+-+..+-. ..++++..|+.++..+.
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~-~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIF-CWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCeEEEEcCc
Confidence 467777655321 111 1347888887777666654421127889999998887664442 33688889988887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
.++.+...+++.++..++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 788999999999999999888765544
No 164
>PLN02574 4-coumarate--CoA ligase-like
Probab=63.29 E-value=78 Score=31.87 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=69.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.++++. +.+| ..+|.+.+...+..+...+.. ..+.++|++..+.+-+..+ +...++++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcC
Confidence 456677664 2222 247888887766655554432 1288999999998865432 223478889999888766
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
. ....+...+.+.++..++..+.....+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 5 6788999999999999988887666553
No 165
>KOG1177|consensus
Probab=62.71 E-value=1.6e+02 Score=29.15 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=75.3
Q ss_pred hcCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcc--CCHHHHHHHHHHHhcCCeEEEc
Q psy2417 95 ESNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQ--NCPEWIITEQGAYCYSMIIVAL 169 (391)
Q Consensus 95 ~~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~--~s~e~i~~~lA~~~~G~~~vpl 169 (391)
..||..+.+.... .+.+ ...+|--.+...+..++..+ |+....++.+-.| .+.-.++..+|++..|+..|.-
T Consensus 231 ~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp 307 (596)
T KOG1177|consen 231 LSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFP 307 (596)
T ss_pred cCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEee
Confidence 3677777665542 2333 57899888888888877764 5555444444333 2345567789999999999998
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEcCCcchhHHH
Q psy2417 170 YDTLGPDACAFIINQAEISVLIVDDDSKCNQII 202 (391)
Q Consensus 170 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 202 (391)
.|.+.+...-+.+.+.++..++..... +.+++
T Consensus 308 ~~~f~~k~alqai~~ekcT~l~gtPtM-~~Dll 339 (596)
T KOG1177|consen 308 APSFDPKDALQAISNEKCTTLYGTPTM-FVDLL 339 (596)
T ss_pred CCCCChHHHHHHHHhhceEEEecChHH-HHHHh
Confidence 999999999999999999999988764 44444
No 166
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=62.71 E-value=1e+02 Score=31.48 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=70.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.... .+| ....+|.+.+...+..+...+....+.++|++..++|-+-.+ +...++++..|+..+....
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 567788765322 122 245799999988776666554322288999999999866533 2334788889998887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
.+..+...++..++.+++.....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 78899999999999999887653
No 167
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=62.46 E-value=1.2e+02 Score=31.42 Aligned_cols=96 Identities=11% Similarity=0.062 Sum_probs=68.5
Q ss_pred CCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-
Q psy2417 255 PTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG- 333 (391)
Q Consensus 255 ~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~- 333 (391)
++.+|++.-.-+ .+ ....+|.+.+...+..+...+....+.++|++..++|..-.+-. ..++++..|+..+.+..
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~-~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI-AMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEeeCCC
Confidence 566776543221 11 23679999998877666665432228999999999997664433 33788888988777654
Q ss_pred -CHHhHHHHHHhcCCcEEecCh
Q psy2417 334 -DIKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 -~~~~l~~~i~~~~~t~~~~~P 354 (391)
.++.+...+++.++.+++...
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 789999999999999998765
No 168
>PRK07514 malonyl-CoA synthase; Validated
Probab=62.37 E-value=1e+02 Score=30.33 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=64.4
Q ss_pred EEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEE
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~ 350 (391)
+..+|...+...+......+....+.++|++....+-... .....++++..|+..+..+. ....+...++..+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e-~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPE-ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 4578999887777666655432227889999888886632 22233788889988887655 67889999999999999
Q ss_pred ecChHHHHHHH
Q psy2417 351 PAVPRLLNRMY 361 (391)
Q Consensus 351 ~~~P~~l~~l~ 361 (391)
...+.....+.
T Consensus 105 i~~~~~~~~~~ 115 (504)
T PRK07514 105 VCDPANFAWLS 115 (504)
T ss_pred EEccchhHHHH
Confidence 88887766543
No 169
>PRK06839 acyl-CoA synthetase; Validated
Probab=62.20 E-value=1.3e+02 Score=29.53 Aligned_cols=98 Identities=12% Similarity=-0.035 Sum_probs=70.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.+|.+. .+..+|+..+...+..+...+.. ..+.+++++...++-+..+ ....++++..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 456676663 14678999998887766655421 0177899999888776442 233478888899888766
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
. .+..+...+++.+++.++..+.....+.
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHHH
Confidence 4 7788889999999999998887766543
No 170
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=61.68 E-value=1.3e+02 Score=30.62 Aligned_cols=103 Identities=13% Similarity=0.068 Sum_probs=72.3
Q ss_pred CCCCceEEEec--CCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEE
Q psy2417 254 KPTDLCTICYT--SGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGY 330 (391)
Q Consensus 254 ~~~~~a~i~~T--SGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~ 330 (391)
.++.++++.-. .+++|. ...+|...+...+..+...+... +.++|++...++-+.. +... ++++..|+..+.
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChh--HHHHHHHHHHcCceeEe
Confidence 35667765421 112332 35689999988887777766433 7889999999987753 3333 788899998775
Q ss_pred e-CC----CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 331 Y-SG----DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 331 ~-~~----~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
+ +. .++.+...++..++..++..+..+..+.
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 157 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVE 157 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHH
Confidence 5 22 2678899999999999998877765543
No 171
>PRK13388 acyl-CoA synthetase; Provisional
Probab=61.65 E-value=95 Score=31.07 Aligned_cols=96 Identities=11% Similarity=-0.046 Sum_probs=68.7
Q ss_pred CCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCC-CCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 255 PTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRP-KYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 255 ~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
++.+|++. ++..+|+..+...+..+...+....+ .++|++...++-+..+-. ..++++..|+..+..+.
T Consensus 15 p~~~Al~~---------~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~-~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 15 DDTIAVRY---------GDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLF-WLAAAALGGYVLVGLNT 84 (540)
T ss_pred CCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHH-HHHHHHhCCCEEEEecc
Confidence 56677543 12378999998877766665432225 678999988886554332 34788899999887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+.+.++..++........+
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 113 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRPLL 113 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhHHH
Confidence 678899999999999999877665544
No 172
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=61.41 E-value=1.2e+02 Score=31.12 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=68.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.. +..+|. .-.+|.+.+...+..+...+....+.++|++..++|..-.+ +...++++..|+..+.+..
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~-v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA-VFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecCC
Confidence 4567776543 322332 34689999988776665554322388999999999876432 2234788899998877654
Q ss_pred --CHHhHHHHHHhcCCcEEecCh
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P 354 (391)
....+...++..++.+++...
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 778999999999999988764
No 173
>PLN02654 acetate-CoA ligase
Probab=60.19 E-value=1.1e+02 Score=31.68 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=68.8
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.-.. ..| ....+|.+.+...+..+...+....+.++|++..++|..-.+- ...++++..|+..+.+..
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v-~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP-IAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCC
Confidence 356677654222 111 2457899999887766655443222889999999998765332 233788899998887654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
.++.+...++..++.++++....
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~~ 202 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNAV 202 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 78899999999999999876653
No 174
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=60.08 E-value=1.2e+02 Score=30.95 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=68.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. .+..+| ..-.+|.+.+...+..+...+....+.++|++..++|-.-.+-. ..++++..|+..+....
T Consensus 66 ~p~~~A~~~-~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~-~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAF-AMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEeeCC
Confidence 467777654 332223 23568999998777666554432228899999999987553322 34788899998777654
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.+..+...++..++.+++....
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccC
Confidence 7788999999999999887653
No 175
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=60.03 E-value=10 Score=38.53 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=36.8
Q ss_pred CceEEeHHHHHHhhhccCCC-C-CCCCCCCceEEEecCCCCC-CCcEEEeehhHHHH
Q psy2417 230 AIEIIRFDEIERVGAQKMFE-E-VPPKPTDLCTICYTSGTTG-NPKGVMLTHGNVIA 283 (391)
Q Consensus 230 ~~~~~~~~~l~~~~~~~~~~-~-~~~~~~~~a~i~~TSGSTG-~PKgV~~th~~l~~ 283 (391)
.+.+.+|+++...-...... . ....++.+-+..-|||||| ++|-+.+|+..+-.
T Consensus 73 ~VPv~~Yedl~pyI~Ri~~Ge~s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 73 VMPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred hCCCccHHHhHHHHHHHHcCCCCCccCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 45667777765432221111 1 2245777888999999997 69999999998766
No 176
>PRK07798 acyl-CoA synthetase; Validated
Probab=59.87 E-value=1.2e+02 Score=29.84 Aligned_cols=98 Identities=9% Similarity=-0.036 Sum_probs=68.0
Q ss_pred CCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-
Q psy2417 255 PTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG- 333 (391)
Q Consensus 255 ~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~- 333 (391)
++.+|.+. ++-.+|...+...+..+...+....+..+|++...++-.-.+ +...++++..|+..+..+.
T Consensus 17 p~~~a~~~---------~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~ 86 (533)
T PRK07798 17 PDRVALVC---------GDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYR 86 (533)
T ss_pred CCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcC
Confidence 46666654 234689999887776665554322277899988887654322 2233788888988887765
Q ss_pred -CHHhHHHHHHhcCCcEEecChHHHHHHHH
Q psy2417 334 -DIKNLTEDMKTLKPTIMPAVPRLLNRMYD 362 (391)
Q Consensus 334 -~~~~l~~~i~~~~~t~~~~~P~~l~~l~~ 362 (391)
....+...+++.++..++........+.+
T Consensus 87 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 116 (533)
T PRK07798 87 YVEDELRYLLDDSDAVALVYEREFAPRVAE 116 (533)
T ss_pred CCHHHHHHHHhhcCCCEEEEchhhHHHHHH
Confidence 67889999999999999888776655443
No 177
>PRK07529 AMP-binding domain protein; Validated
Probab=59.22 E-value=94 Score=31.93 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=66.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.+..+.. ..++..+|.+.+...+..+...+....+.++|++...+|-+..+- ...++++..|. ++..+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~-~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETH-FALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCE-EEeCCC
Confidence 467788776643321 124567999999887766665543222789999999998665432 33367777774 333333
Q ss_pred --CHHhHHHHHHhcCCcEEecC
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAV 353 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~ 353 (391)
.++.+...+++.++..++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 78899999999999998875
No 178
>PRK09088 acyl-CoA synthetase; Validated
Probab=58.85 E-value=1.2e+02 Score=29.64 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=66.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++....| ..+|+..+...+......+....+.++|++..+++-+..+- ...++++..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~-~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLV-ALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEEeeCc
Confidence 4566666543333 36899999887766666553223788999998887665433 234788888988887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
.+..+...+++.+++.++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDDAV 104 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcchh
Confidence 77888999999999998775533
No 179
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=58.81 E-value=70 Score=31.55 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=64.1
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|++.+...+......+....+.++|++..+++-+..+-. ..++++..|+..+..+. .+..+...+++.++..++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVT-AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 68999998877666655432237788999988876554333 34688889998887665 7889999999999999988
Q ss_pred ChHHHHHHH
Q psy2417 353 VPRLLNRMY 361 (391)
Q Consensus 353 ~P~~l~~l~ 361 (391)
.+..+..+.
T Consensus 104 ~~~~~~~~~ 112 (515)
T TIGR03098 104 SSERLDLLH 112 (515)
T ss_pred ccchhhhhH
Confidence 876665543
No 180
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=58.66 E-value=59 Score=30.80 Aligned_cols=63 Identities=11% Similarity=0.025 Sum_probs=49.9
Q ss_pred CCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 297 PKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 297 ~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
+..+|++...+|-.-. .+...++++..|+.++..+. ....+...+++.+++.+...+.....+
T Consensus 22 ~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 22 VGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred CCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 7889999998887643 33344788999999887765 778889999999999999988766554
No 181
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=58.39 E-value=1e+02 Score=30.73 Aligned_cols=99 Identities=11% Similarity=0.060 Sum_probs=67.8
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++.+-... ..+..+|...+...+..+...+....+.+++++...++-...+ ....++++..|+.++..+.
T Consensus 35 ~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF-TALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeccCc
Confidence 35667776542211 1135689999987776666654322378899999888854433 3344788899988876654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
....+...++..+++.++..+..
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~~ 135 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSVF 135 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEcccc
Confidence 67888999999999998876643
No 182
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=58.14 E-value=92 Score=31.40 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=63.8
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|.+.+...+......+....+.++|++...++-+..+- ...++++..|+.++.... .+..+...++..+++.++
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY-FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 46899999887766655443222789999998888655432 233788888998886654 778899999999999999
Q ss_pred cChHHHHHH
Q psy2417 352 AVPRLLNRM 360 (391)
Q Consensus 352 ~~P~~l~~l 360 (391)
..+..+..+
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 888776554
No 183
>PRK13383 acyl-CoA synthetase; Provisional
Probab=57.89 E-value=88 Score=31.01 Aligned_cols=86 Identities=13% Similarity=0.041 Sum_probs=64.0
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|...+...+..+...+....+.++|++...++-+-.+ +...++++..|+..+..+. ..+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF-VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 588888887777666655322278899999888754432 2234688888999887765 7889999999999999998
Q ss_pred ChHHHHHHH
Q psy2417 353 VPRLLNRMY 361 (391)
Q Consensus 353 ~P~~l~~l~ 361 (391)
.+.....+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887665543
No 184
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=56.94 E-value=74 Score=31.74 Aligned_cols=87 Identities=6% Similarity=-0.006 Sum_probs=64.4
Q ss_pred EeehhHHHHHHHHHHHhhcCC-CCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 275 MLTHGNVIAAISAALLQLSDH-RPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
.+|+..+...+......+... .+.++|++...++-+- -.+...++++..|+..+..+. .+..+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 589999988776666554322 2888999998888543 333344788889998887655 778999999999999999
Q ss_pred cChHHHHHHHH
Q psy2417 352 AVPRLLNRMYD 362 (391)
Q Consensus 352 ~~P~~l~~l~~ 362 (391)
..+.....+.+
T Consensus 114 ~~~~~~~~~~~ 124 (546)
T PRK08314 114 VGSELAPKVAP 124 (546)
T ss_pred EccchhhhHHH
Confidence 88877665543
No 185
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=56.68 E-value=1.5e+02 Score=30.69 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=68.4
Q ss_pred CCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC-
Q psy2417 255 PTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG- 333 (391)
Q Consensus 255 ~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~- 333 (391)
++++|++.... +|. ...+|.+.+...+..+...+....+.++|++..++|.+-.+-. ..++++..|+..+....
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~-~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV-AMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHhCeEEEecCCC
Confidence 35666655422 232 3568999998887766665532238899999999998654333 33788889988877654
Q ss_pred -CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 -DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 -~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.++.+...+++.++.+++....
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEccc
Confidence 6789999999999999987654
No 186
>PRK05857 acyl-CoA synthetase; Validated
Probab=56.62 E-value=1e+02 Score=30.90 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=67.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.|+.+|++.. .| ...+|.+.+...+..+...+....+.++|++..+++-+..+-. ..++++..|+..+..+.
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~-~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYL-SVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHH-HHHHHHHcCeEEEecCc
Confidence 4667766542 22 1468999998877766665432227889999988876654333 34788899999887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
..+.+...++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 77888889999999888877653
No 187
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=56.33 E-value=1.4e+02 Score=29.97 Aligned_cols=83 Identities=14% Similarity=0.053 Sum_probs=65.4
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|.+.+...+......+. -.++|++..++|-+..+-. ..++++..|+..+..+. ....+...++..++..++.
T Consensus 45 ~~Ty~el~~~~~~lA~~L~---~~~gd~Val~~~n~~e~~~-~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 120 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVS---KYPDQHIGIMMPASAGAYI-AYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLT 120 (539)
T ss_pred cccHHHHHHHHHHHHHHHh---hccCCeEEEEcCCchHHHH-HHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEe
Confidence 4799999999888888776 3578999998886654333 34789999998887765 6788999999999999998
Q ss_pred ChHHHHHHH
Q psy2417 353 VPRLLNRMY 361 (391)
Q Consensus 353 ~P~~l~~l~ 361 (391)
....+..+.
T Consensus 121 ~~~~~~~~~ 129 (539)
T PRK06334 121 SKQLMQHLA 129 (539)
T ss_pred hHHHHHHHh
Confidence 877766553
No 188
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=55.88 E-value=58 Score=31.09 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHhcCC-CceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhc
Q psy2417 84 TLYDAFRKGAKESNN-GRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCY 162 (391)
Q Consensus 84 tl~~~l~~~~~~~pd-~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~ 162 (391)
...+.|++...++-. +-|+.... -...|.-.|+.+|++|||-|.+ .+.-|+...=+++..
T Consensus 34 ~~v~~FE~~~ae~~G~k~ava~~s----------------gT~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~ 94 (374)
T COG0399 34 PFVRRFEQAFAEYLGVKYAVAVSS----------------GTAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLV 94 (374)
T ss_pred hHHHHHHHHHHHHhCCCeEEEecC----------------hHHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHc
Confidence 345556666555433 33444433 2456777788889999996543 567899999999999
Q ss_pred CCeEEEccC-----CCCHHHHHHHHHhcCccEEEEc
Q psy2417 163 SMIIVALYD-----TLGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 163 G~~~vpl~~-----~~~~~~l~~il~~~~~~~vi~~ 193 (391)
|+.+|-+|- ..+++.++..+... .+.|+..
T Consensus 95 Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 95 GAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred CCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 999887654 35788888888775 6666654
No 189
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.83 E-value=1.5e+02 Score=29.74 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=69.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++.+...-+. .+|++.+...+......+....+.++|++...++-+..+- ...++++..|+..+.++.
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~-~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFL-IAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCEEEeecCc
Confidence 45667766654433 8999999998887777664322668999998888664332 233788889999888765
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.+..+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 6888899999999999888876
No 190
>PLN03051 acyl-activating enzyme; Provisional
Probab=55.78 E-value=1e+02 Score=30.54 Aligned_cols=96 Identities=10% Similarity=-0.094 Sum_probs=63.6
Q ss_pred CCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHH-HHHHHHHHHhcCCeEEEccCC
Q psy2417 97 NNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPE-WIITEQGAYCYSMIIVALYDT 172 (391)
Q Consensus 97 pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e-~i~~~lA~~~~G~~~vpl~~~ 172 (391)
++.+|++.... .+.+ ...+|++.+...+... ....++.+++++...++-+.. ....+++.+..|+..+.....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 46666665432 2222 4567877765543322 234578889988766664321 233567888999988877655
Q ss_pred CCHHHHHHHHHhcCccEEEEcCC
Q psy2417 173 LGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 173 ~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
..++.+...+++.++.++.....
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~ 217 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPS 217 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHH
Confidence 66788999999999999988765
No 191
>PRK07470 acyl-CoA synthetase; Validated
Probab=55.41 E-value=1.4e+02 Score=29.70 Aligned_cols=86 Identities=10% Similarity=-0.023 Sum_probs=62.8
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|.+.+...+......+....+.++|++....+-+..+-. ..++++..|+..+..+. ....+...+++.+++.++
T Consensus 31 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 109 (528)
T PRK07470 31 RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFE-SMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMI 109 (528)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEE
Confidence 468999988777666555432237889999888776553332 23788899988887765 678889999999999998
Q ss_pred cChHHHHHH
Q psy2417 352 AVPRLLNRM 360 (391)
Q Consensus 352 ~~P~~l~~l 360 (391)
..+...+.+
T Consensus 110 ~~~~~~~~~ 118 (528)
T PRK07470 110 CHADFPEHA 118 (528)
T ss_pred EcchhHHHH
Confidence 887665443
No 192
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=55.40 E-value=1.1e+02 Score=30.04 Aligned_cols=87 Identities=11% Similarity=-0.043 Sum_probs=64.1
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
-.+|...+...+......+....+.++|++....+-+..+ ....++++..|+..+..+. ....+...+++.++..++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF-FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 4588888877766665554332378899999988866443 3345788999998887655 677888899999999998
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
..+.....+.
T Consensus 89 ~~~~~~~~~~ 98 (502)
T PRK08276 89 VSAALADTAA 98 (502)
T ss_pred EccchhhHHH
Confidence 8887766543
No 193
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=55.37 E-value=87 Score=35.67 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=68.7
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.|+.+|++...+...+...+..+|++.+...+..+...+......+++++..+++-+..+ +...++++..|+..+..+.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 467787765432211112245799999988877666655322278899999988876544 2334799999999887765
Q ss_pred --CHHhHHHHHHhcCCcEEecCh
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P 354 (391)
.+..+...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 567788888999998877643
No 194
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=55.15 E-value=1e+02 Score=30.83 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=69.6
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.-. . +..+|++.+...+..+...+....+.++|++...++-...+- ...++++..|+..+..+.
T Consensus 41 ~p~~~a~~~~~---~----~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAV---T----GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecC---C----CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCc
Confidence 46667765322 1 246899999887766666543223788999998887665433 234788999998876654
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+++.++..+...+..+..+
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 678889999999999998877665544
No 195
>PRK14057 epimerase; Provisional
Probab=54.32 E-value=1.3e+02 Score=26.91 Aligned_cols=66 Identities=11% Similarity=0.006 Sum_probs=49.5
Q ss_pred HHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC----------eEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 127 FGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM----------IIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 127 la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~----------~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
....+.+.| .+.|.+..+......-++--+-..|+ +-+.|+|..|.+.+..+|.....-+|.+...
T Consensus 90 ~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV~P 165 (254)
T PRK14057 90 AAQACVKAG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNP 165 (254)
T ss_pred HHHHHHHhC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEECC
Confidence 334444444 56899999977665555556677775 7899999999999999999988877777544
No 196
>PLN02565 cysteine synthase
Probab=53.98 E-value=1.3e+02 Score=27.99 Aligned_cols=79 Identities=11% Similarity=-0.031 Sum_probs=56.1
Q ss_pred EeHHHHHHHHHHHHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEc
Q psy2417 115 IHYNQALLRARNFGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 115 ~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~ 193 (391)
-||+. +-+..+-..+.+.|. .+|....+....+-.-+...+++...|...+.+-|...++.....++..++++++++
T Consensus 43 GSfKd--R~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 120 (322)
T PLN02565 43 SSVKD--RIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120 (322)
T ss_pred cchHH--HHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeC
Confidence 34553 334444444555664 778655566666666666677888899988887787788888889999999999998
Q ss_pred CC
Q psy2417 194 DD 195 (391)
Q Consensus 194 ~~ 195 (391)
..
T Consensus 121 ~~ 122 (322)
T PLN02565 121 PA 122 (322)
T ss_pred CC
Confidence 63
No 197
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.74 E-value=1.4e+02 Score=29.97 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=68.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.+|.+. . +..+|+..+...+..+...+.. ..+.++|++..+++-+..+-. ..++++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~-~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPV-AVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH-HHHHHHHcCeEEeecC
Confidence 356677653 1 2468999998887777665531 127899999999886554332 3478889998888765
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNR 359 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~ 359 (391)
. ..+.+...+++.++..++........
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 135 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAHL 135 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhhh
Confidence 4 67889999999999998876655443
No 198
>PLN02479 acetate-CoA ligase
Probab=53.30 E-value=1.8e+02 Score=29.30 Aligned_cols=97 Identities=9% Similarity=0.083 Sum_probs=69.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. |. ..+|...+...+..+...+....+.++|++...++-+..+- ...++++..|+..+..+.
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY-EAHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhCCcEEEEecc
Confidence 466676653 21 35788988887776666553222889999999888654332 234788899988887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+++.++..++..+..+...
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFFTLA 131 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhhhHH
Confidence 678999999999999999887765443
No 199
>PRK13391 acyl-CoA synthetase; Provisional
Probab=52.41 E-value=2e+02 Score=28.36 Aligned_cols=99 Identities=10% Similarity=-0.045 Sum_probs=70.6
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++.+...+| -.+|...+...+..+...+....+.+++++..+.+-+..+-. ..++++..|+.++..+.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~-~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLE-VCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhccEEecccc
Confidence 4666776655443 248999888777666655432227789999888876554333 34688889998887755
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+++.++..+...+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 778899999999999998888766544
No 200
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=52.24 E-value=37 Score=32.14 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHh-cCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 83 KTLYDAFRKGAKE-SNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 83 ~tl~~~l~~~~~~-~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
....+.|++.... ...+-|+..... ...|-..|..+|+++|+.|.+- ..-|....-|+..
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sg----------------t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~ 84 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSG----------------TSALHLALRALGLGPGDEVIVP---AYTFPATASAILW 84 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSH----------------HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCh----------------hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHH
Confidence 3456667666555 455556655542 3456667777999999999775 4456677789999
Q ss_pred cCCeEEEccCC-----CCHHHHHHHHHhcCccEEEEcC
Q psy2417 162 YSMIIVALYDT-----LGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 162 ~G~~~vpl~~~-----~~~~~l~~il~~~~~~~vi~~~ 194 (391)
.|+.+|.+|-+ ..++.+...+..-. ++|+...
T Consensus 85 ~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 85 AGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp TT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred hccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 99988876553 57788888876443 5555543
No 201
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=51.39 E-value=1.2e+02 Score=30.24 Aligned_cols=92 Identities=15% Similarity=-0.028 Sum_probs=64.7
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++. . + |..+|.+.+...+..+...+....+.++|++...+|-+-. .+...++++..|+.++..+.
T Consensus 36 ~pd~~a~~~-~---~----~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVVD-N---H----GASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEEc-C---C----CCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccch
Confidence 466677653 2 2 2468999998887766665533337899999988875542 22334788999998887654
Q ss_pred --CHHhHHHHHHhcCCcEEecCh
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P 354 (391)
....+...+...++.+++...
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~~ 129 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAPT 129 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEec
Confidence 678888899999998887643
No 202
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=51.10 E-value=32 Score=24.53 Aligned_cols=42 Identities=19% Similarity=0.075 Sum_probs=35.4
Q ss_pred HHHHHh-CCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEc
Q psy2417 128 GSGLLG-LGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVAL 169 (391)
Q Consensus 128 a~~L~~-~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl 169 (391)
+.+|.+ .|+++|+.++.+.....|-+.++=|.+|+.-+-+-.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 456765 499999999999999999999999999998665433
No 203
>PRK05850 acyl-CoA synthetase; Validated
Probab=50.79 E-value=2.5e+02 Score=28.25 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=71.2
Q ss_pred CCCCceEEEec-CCC-CCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEe
Q psy2417 254 KPTDLCTICYT-SGT-TGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYY 331 (391)
Q Consensus 254 ~~~~~a~i~~T-SGS-TG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~ 331 (391)
.++.+|++... ++. .|. ...+|+..+...+..+...+... -.++|++...++-+. --+...++++..|+.++..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~-g~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRH-GSTGDRAVILAPQGL-EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHh-CCCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEec
Confidence 46677765432 111 122 35789999988777666655422 246899988888653 2223347889999988877
Q ss_pred CC-----CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 332 SG-----DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 332 ~~-----~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
+. ....+...++..++..++..+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 53 4578889999999999999888776654
No 204
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=50.31 E-value=61 Score=30.94 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=41.1
Q ss_pred HHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCC-----CCHHHHHHHHHhcCccEEEEcC
Q psy2417 127 FGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDT-----LGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 127 la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~vi~~~ 194 (391)
+...+...++++||.|.+-.+ .|.....++...|+.++.++.+ ...+.+...+.. +.++|+...
T Consensus 59 L~~~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~ 127 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH 127 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC
Confidence 333445567899999877444 4555566777889887766543 456677776653 566666543
No 205
>PRK06164 acyl-CoA synthetase; Validated
Probab=50.13 E-value=1.2e+02 Score=30.19 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=65.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. +...+|...+...+..+...+....+.++|++....+-+..+- ...++++..|+..+..+.
T Consensus 23 ~p~~~a~~~---------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 92 (540)
T PRK06164 23 RPDAVALID---------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWV-VLFLACARLGATVIAVNT 92 (540)
T ss_pred CCCCeEEec---------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCcEEEecCC
Confidence 456677661 1235899988877666655443222788999998888765332 234788899999887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
....+...+.+.++++++..+..
T Consensus 93 ~~~~~~l~~~i~~~~~~~ii~~~~~ 117 (540)
T PRK06164 93 RYRSHEVAHILGRGRARWLVVWPGF 117 (540)
T ss_pred CCCcHHHHHHHHhcCccEEEEcccc
Confidence 67889999999999999876653
No 206
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=49.13 E-value=2.1e+02 Score=28.63 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=68.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhc-CCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLS-DHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.+|++.. | ..+|+..+...+..+...+. ...+.++|++..++|-...+- ...++++..|+..+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP-IATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEeccC
Confidence 3566776532 2 35899999887776665431 111888999998887665433 23478889999988765
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
. ....+...+.+.+++.++........+
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 4 678888999999999998877665443
No 207
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=49.07 E-value=70 Score=30.42 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=39.7
Q ss_pred HHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccC--C---CCHHHHHHHHHhcCccEEEEc
Q psy2417 130 GLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYD--T---LGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 130 ~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~--~---~~~~~l~~il~~~~~~~vi~~ 193 (391)
.+...++++|+.|.+-.+. |.....++...|+.++.++. . ...+.+...+.. +.++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3344578899998775554 44445667788988776653 2 567888887754 56666643
No 208
>PRK08162 acyl-CoA synthetase; Validated
Probab=48.65 E-value=1.4e+02 Score=29.83 Aligned_cols=87 Identities=9% Similarity=0.052 Sum_probs=65.7
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|...+...+......+....+.++|++...++-+..+-. ..++++..|+..+..+. ....+...++..+++.++
T Consensus 42 ~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~-~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 42 RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVE-AHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHH-HHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 358999998887777665532237889999998887653332 33788888988887665 778999999999999999
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
.-+..+..+.
T Consensus 121 ~~~~~~~~~~ 130 (545)
T PRK08162 121 VDTEFAEVAR 130 (545)
T ss_pred EccchhhHHH
Confidence 8887766553
No 209
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=48.07 E-value=2.4e+02 Score=27.77 Aligned_cols=97 Identities=9% Similarity=-0.019 Sum_probs=67.3
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~ 332 (391)
.++.++++- . +-.+|...+...+......+......+++++...++-.. ..... ++++..|+..+..+
T Consensus 18 ~p~~~a~~~--~-------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~--~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 18 RGGKTAFID--D-------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGV--DFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred cCCceEEEe--C-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeecc
Confidence 467777653 1 235788888777665555442212788898888776553 33333 78888899888776
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
. .+..+...+++.+++.++........+.
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 117 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIK 117 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHH
Confidence 5 7889999999999999988776655543
No 210
>PRK13390 acyl-CoA synthetase; Provisional
Probab=48.03 E-value=2.7e+02 Score=27.31 Aligned_cols=95 Identities=15% Similarity=-0.003 Sum_probs=67.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++... + +..+|...+...+..+...+....+.++|++...++-+..+-. ..++++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~---~----~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~-~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---T----GEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALV-VLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---C----CeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH-HHHHHHHhCCEEecccc
Confidence 46667765432 2 2468999998887776665532237889999988887664333 34788899998887655
Q ss_pred --CHHhHHHHHHhcCCcEEecChHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRL 356 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~ 356 (391)
.+..+...+...++..+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAAL 106 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcchh
Confidence 67888889999999888765543
No 211
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=48.00 E-value=1.3e+02 Score=28.11 Aligned_cols=55 Identities=9% Similarity=0.097 Sum_probs=33.9
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEc--cC--CCCHHHHHHHHHhcCccEEEEc
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVAL--YD--TLGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl--~~--~~~~~~l~~il~~~~~~~vi~~ 193 (391)
+++|+.|.+..|. |.....++...|+..+++ +. ....+.+...+...++++++..
T Consensus 97 ~~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHPS---FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCCC---hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 5678988775443 333344556677765554 43 2456778777766577777654
No 212
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=46.97 E-value=1.7e+02 Score=27.93 Aligned_cols=62 Identities=10% Similarity=-0.012 Sum_probs=47.7
Q ss_pred hCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 133 GLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 133 ~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
+.| +.||....|....+-.-+...++|...|.-...+-|...+.+-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 445 67785555556677777777778889998777777776777778999999999999974
No 213
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=46.71 E-value=2e+02 Score=25.36 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=50.9
Q ss_pred HHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC---eEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 126 NFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM---IIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 126 ~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~---~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+....+.+.| .+.|.+..+.+....-++--+-+.|+ +-+.|+|..|.+.+..++...+.-+|.+...
T Consensus 82 ~~i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~vD~VLiMtV~P 151 (228)
T PRK08091 82 EVAKACVAAG---ADIVTLQVEQTHDLALTIEWLAKQKTTVLIGLCLCPETPISLLEPYLDQIDLIQILTLDP 151 (228)
T ss_pred HHHHHHHHhC---CCEEEEcccCcccHHHHHHHHHHCCCCceEEEEECCCCCHHHHHHHHhhcCEEEEEEECC
Confidence 3444455544 46899999977666566666778885 6789999999999999999998888777544
No 214
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=46.27 E-value=50 Score=29.77 Aligned_cols=69 Identities=17% Similarity=0.304 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHh-C-CCCCCC-eEEEEccCCHHHH
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLG-L-GVNPGS-FVGIYSQNCPEWI 153 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~-gv~~g~-~V~i~~~~s~e~i 153 (391)
..-+++++++.-+. ++|+++.+..+.-.-.--|++|...+..+-..|.. + |++.++ +|.|++.|.++.+
T Consensus 196 ar~Ihely~rA~~~---aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L 267 (368)
T COG1223 196 ARRIHELYERARKA---APCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL 267 (368)
T ss_pred HHHHHHHHHHHHhc---CCeEEEehhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhc
Confidence 34567777665554 56888877433223446799998888888777764 3 777765 7888888998875
No 215
>PLN02614 long-chain acyl-CoA synthetase
Probab=46.13 E-value=1.7e+02 Score=30.30 Aligned_cols=87 Identities=9% Similarity=-0.123 Sum_probs=63.5
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|++.+...+..+...+....+.++|++...++-+..+- ...++++..|+..+-... .+..+...++..++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWI-ISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 35799988877766555443222889999999888665322 223788899998887654 788999999999999999
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
.....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 8876655543
No 216
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=45.77 E-value=2.1e+02 Score=29.55 Aligned_cols=87 Identities=10% Similarity=-0.104 Sum_probs=64.5
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|++.+...+..+...+....+.++|++...++-+..+- ...++++..|+.++-... ....+...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWI-IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 46899999888776666543222889999999888664432 233788999998887654 778999999999999999
Q ss_pred cChHHHHHHH
Q psy2417 352 AVPRLLNRMY 361 (391)
Q Consensus 352 ~~P~~l~~l~ 361 (391)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776655553
No 217
>PRK13382 acyl-CoA synthetase; Provisional
Probab=45.73 E-value=1.9e+02 Score=28.80 Aligned_cols=97 Identities=12% Similarity=-0.121 Sum_probs=68.7
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++- .+ -.+|...+...+..+...+....+.++|++...++-+-. .+...++++..|+.++..+.
T Consensus 56 ~p~~~a~~~--~~-------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~ 125 (537)
T PRK13382 56 CPDRPGLID--EL-------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNT 125 (537)
T ss_pred CCCCeEEEe--CC-------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCc
Confidence 456777763 11 158888887776666554422227889999999886554 23344788899999887765
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
....+...+++.+++.++........+
T Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 154 (537)
T PRK13382 126 SFAGPALAEVVTREGVDTVIYDEEFSATV 154 (537)
T ss_pred ccCHHHHHHHHHhcCCCEEEEchhhHHHH
Confidence 678899999999999998876655444
No 218
>PRK12582 acyl-CoA synthetase; Provisional
Probab=45.73 E-value=1.9e+02 Score=29.66 Aligned_cols=97 Identities=16% Similarity=0.066 Sum_probs=64.7
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++....+ .| ..-.+|++.+...+..+...+....+.++|++..+++-+. -.....++++..|+..+..+.
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccC
Confidence 3455665542211 22 2357899999888777666543222788999999988443 233334788889998887654
Q ss_pred --C-----HHhHHHHHHhcCCcEEecCh
Q psy2417 334 --D-----IKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 --~-----~~~l~~~i~~~~~t~~~~~P 354 (391)
. ...+...++..++..++...
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 2 37888999999998887654
No 219
>PRK05852 acyl-CoA synthetase; Validated
Probab=45.71 E-value=1.9e+02 Score=28.82 Aligned_cols=91 Identities=7% Similarity=-0.090 Sum_probs=63.4
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.. .+ ...+|...+...+......+....+.++|++...++-+- -.....++++..|+..+..+.
T Consensus 29 ~p~~~ai~~~-~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 100 (534)
T PRK05852 29 LPEAPALVVT-AD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDP 100 (534)
T ss_pred CCCCcEEEec-CC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCC
Confidence 4566776542 11 235898988877766665543223788999998877554 233344788899998887765
Q ss_pred --CHHhHHHHHHhcCCcEEec
Q psy2417 334 --DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~ 352 (391)
.+..+...++..++..++.
T Consensus 101 ~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 101 ALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCcHHHHHHHHhCCCCEEEE
Confidence 6788899999999998874
No 220
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.65 E-value=3e+02 Score=27.65 Aligned_cols=101 Identities=13% Similarity=-0.004 Sum_probs=71.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.++.+.. + . ..-.+|...+...+......+.. ..+.++|++...++-+..+- ...++++..|+..+..+
T Consensus 23 ~~~~~a~~~~-~----~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 23 HGDTTVTTWG-G----A-EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLN 95 (576)
T ss_pred CCCceEEEEc-C----C-ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecc
Confidence 4566665542 1 1 24578999998877766665421 12788999998888655443 33478888999888765
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
. .+..+...+...++..++.-+.....+.
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~ 126 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLAEQLG 126 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhHHHHH
Confidence 5 6789999999999999998887666553
No 221
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=45.04 E-value=76 Score=25.36 Aligned_cols=41 Identities=7% Similarity=-0.082 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccC---CHHHHHHHHHHHhcCCe
Q psy2417 125 RNFGSGLLGLGVNPGSFVGIYSQN---CPEWIITEQGAYCYSMI 165 (391)
Q Consensus 125 ~~la~~L~~~gv~~g~~V~i~~~~---s~e~i~~~lA~~~~G~~ 165 (391)
+.+...|.+.|+.+++.|.+++.. +.....+++++..+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467888899999999999999865 55556666777777855
No 222
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=44.90 E-value=1.9e+02 Score=28.98 Aligned_cols=85 Identities=11% Similarity=0.011 Sum_probs=61.3
Q ss_pred EEeehhHHHHHHHHHHHhhcCC-CCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEE
Q psy2417 274 VMLTHGNVIAAISAALLQLSDH-RPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~ 350 (391)
..+|...+...+..+...+... .+.++|++..+++-+..+ ....++++..|+..+.... ....+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 4689999988777666655211 178899999888766542 2233688888888876654 67889999999999998
Q ss_pred ecChHHHHH
Q psy2417 351 PAVPRLLNR 359 (391)
Q Consensus 351 ~~~P~~l~~ 359 (391)
...+.+...
T Consensus 127 i~~~~~~~~ 135 (562)
T PRK12492 127 VYLNMFGKL 135 (562)
T ss_pred EeccccchH
Confidence 876654443
No 223
>PRK07867 acyl-CoA synthetase; Validated
Probab=44.44 E-value=1.8e+02 Score=29.03 Aligned_cols=86 Identities=12% Similarity=-0.042 Sum_probs=62.6
Q ss_pred EEeehhHHHHHHHHHHHhhcCC-CCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEE
Q psy2417 274 VMLTHGNVIAAISAALLQLSDH-RPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~ 350 (391)
..+|...+...+..+...+... ...+++++...++-+.. .....++++..|+.++..+. .++.+...+++.++..+
T Consensus 27 ~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 27 SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPE-FSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 3589999988877666655421 25667888877775432 22334788999999987665 77899999999999999
Q ss_pred ecChHHHHHH
Q psy2417 351 PAVPRLLNRM 360 (391)
Q Consensus 351 ~~~P~~l~~l 360 (391)
+........+
T Consensus 106 i~~~~~~~~~ 115 (529)
T PRK07867 106 LTESAHAELL 115 (529)
T ss_pred EECHhHHHHH
Confidence 9988766543
No 224
>PRK06188 acyl-CoA synthetase; Validated
Probab=43.75 E-value=2.7e+02 Score=27.50 Aligned_cols=81 Identities=12% Similarity=0.006 Sum_probs=60.0
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|...+...+......+......+++++...++-+-.+- ...++++..|+..+..+. ....+...+...+++.+.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVL-MAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 46899999887766666543223778899888876554322 234788899999887755 678888999999999998
Q ss_pred cChH
Q psy2417 352 AVPR 355 (391)
Q Consensus 352 ~~P~ 355 (391)
..+.
T Consensus 115 ~~~~ 118 (524)
T PRK06188 115 VDPA 118 (524)
T ss_pred Eecc
Confidence 8776
No 225
>PRK06178 acyl-CoA synthetase; Validated
Probab=43.46 E-value=1.9e+02 Score=29.11 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=64.2
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|...+...+......+....+.+++++...++-+..+- ...++++..|+..+..+. ....+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH-IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH-HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5899999887766665543222778899988888766433 334788888988876654 6788999999999999999
Q ss_pred ChHHHHHHH
Q psy2417 353 VPRLLNRMY 361 (391)
Q Consensus 353 ~P~~l~~l~ 361 (391)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888766554
No 226
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.38 E-value=3.3e+02 Score=27.12 Aligned_cols=86 Identities=6% Similarity=-0.183 Sum_probs=61.4
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|...+...+......+....+.++|++..++|-...+- ...++++..|+..+..+. .+..+...++..++..+.
T Consensus 38 ~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 116 (539)
T PRK07008 38 HRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHL-EAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVL 116 (539)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEE
Confidence 35799999777666555442222788999999987664222 223678888888887654 678888999999999988
Q ss_pred cChHHHHHH
Q psy2417 352 AVPRLLNRM 360 (391)
Q Consensus 352 ~~P~~l~~l 360 (391)
..+.....+
T Consensus 117 ~~~~~~~~~ 125 (539)
T PRK07008 117 FDLTFLPLV 125 (539)
T ss_pred EcchhHHHH
Confidence 887765543
No 227
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=43.26 E-value=2.4e+02 Score=25.77 Aligned_cols=67 Identities=7% Similarity=-0.023 Sum_probs=46.0
Q ss_pred HHHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 128 GSGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 128 a~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
.....+.| +.+|+.| +....+-.-...-+++.+.|.....+-|...++.....++..++++++++..
T Consensus 45 l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 45 IWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 33445556 4677766 5555555555666677778987666666554455677889999999999875
No 228
>PLN03013 cysteine synthase
Probab=43.25 E-value=2.2e+02 Score=27.78 Aligned_cols=79 Identities=9% Similarity=-0.018 Sum_probs=55.0
Q ss_pred EeHHHHHHHHHHHHHHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEc
Q psy2417 115 IHYNQALLRARNFGSGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 115 ~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~ 193 (391)
-|+++ +-+..+-..+.+.| +.+|....|....+---+...+++...|..++.+-|...+++....++..++++++++
T Consensus 151 GSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~ 228 (429)
T PLN03013 151 CSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (429)
T ss_pred cccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 34554 23333333444555 5788655566777777777777888899877777676677778888999999999997
Q ss_pred CC
Q psy2417 194 DD 195 (391)
Q Consensus 194 ~~ 195 (391)
..
T Consensus 229 ~~ 230 (429)
T PLN03013 229 PA 230 (429)
T ss_pred CC
Confidence 64
No 229
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=43.22 E-value=1.8e+02 Score=30.29 Aligned_cols=88 Identities=11% Similarity=0.055 Sum_probs=64.8
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
..+|.+.+...+..+...+....+.++|++..+++-+..+- ...++++..|+..+-... .++.+...+...++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL-IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45799988887766555432112789999998887654322 233788899999886654 788999999999999999
Q ss_pred cChHHHHHHHH
Q psy2417 352 AVPRLLNRMYD 362 (391)
Q Consensus 352 ~~P~~l~~l~~ 362 (391)
.....+..+.+
T Consensus 184 ~~~~~~~~l~~ 194 (696)
T PLN02387 184 CDSKQLKKLID 194 (696)
T ss_pred ECHHHHHHHHH
Confidence 98887777654
No 230
>PRK11761 cysM cysteine synthase B; Provisional
Probab=43.14 E-value=2.3e+02 Score=25.95 Aligned_cols=77 Identities=9% Similarity=-0.060 Sum_probs=51.9
Q ss_pred EeHHHHHHHHHHHHHHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEc
Q psy2417 115 IHYNQALLRARNFGSGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 115 ~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~ 193 (391)
-|++. +-+..+...+.+.| +.+|+.|. ....+-.-....++|...|.....+-|...++.....++..++++++++
T Consensus 40 GS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~ 116 (296)
T PRK11761 40 GSVKD--RPALSMIVQAEKRGEIKPGDTLI-EATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVP 116 (296)
T ss_pred CCchh--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 34543 33444444455556 46776654 4555666666677888899877666666556677788899999999998
Q ss_pred C
Q psy2417 194 D 194 (391)
Q Consensus 194 ~ 194 (391)
.
T Consensus 117 ~ 117 (296)
T PRK11761 117 K 117 (296)
T ss_pred C
Confidence 6
No 231
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=41.89 E-value=3.2e+02 Score=28.58 Aligned_cols=96 Identities=7% Similarity=-0.095 Sum_probs=64.5
Q ss_pred cCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCC--HHHHHHHHHHHhcCCeEEEcc
Q psy2417 96 SNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNC--PEWIITEQGAYCYSMIIVALY 170 (391)
Q Consensus 96 ~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s--~e~i~~~lA~~~~G~~~vpl~ 170 (391)
.++.+|++.... .+.+ ...+|++.+...+..+... .++.+++++..++|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 456666655432 2222 4678998887766655433 4788899988887743 334456788888999888665
Q ss_pred CCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 171 DTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 171 ~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
.......+...+++.++..+....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchH
Confidence 445556777788888888777654
No 232
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=40.73 E-value=2.7e+02 Score=25.44 Aligned_cols=68 Identities=9% Similarity=0.025 Sum_probs=47.1
Q ss_pred HHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 127 FGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 127 la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+...+.+.|. .+|+.| +....+-.-...-+++...|...+.+-|...++.....++..++++++++..
T Consensus 45 ~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 45 MIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3334445553 667766 4556666666666777788987776666655566667899999999999864
No 233
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=40.59 E-value=1.1e+02 Score=22.54 Aligned_cols=53 Identities=8% Similarity=-0.169 Sum_probs=37.0
Q ss_pred eEEeHHHHHHH----HHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCe
Q psy2417 113 QWIHYNQALLR----ARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMI 165 (391)
Q Consensus 113 ~~~Ty~el~~~----~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~ 165 (391)
..+.+.++... .+.+...+...++.+++.|.+++.++.....+...+...|.-
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34555555432 235666777778888889999999887776777777788863
No 234
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=39.98 E-value=1.8e+02 Score=28.95 Aligned_cols=88 Identities=7% Similarity=-0.101 Sum_probs=64.1
Q ss_pred EEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEE
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIM 350 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~ 350 (391)
...+|.+.+...+..+...+....+.++|++..+++-...+-. ..++++..|+..+..+. .+..+...++..++..+
T Consensus 37 ~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 37 IVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE-AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred ceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 3468999998877766665432227889999988876654443 23688888998887655 67889999999999999
Q ss_pred ecChHHHHHHH
Q psy2417 351 PAVPRLLNRMY 361 (391)
Q Consensus 351 ~~~P~~l~~l~ 361 (391)
+........+.
T Consensus 116 ~~~~~~~~~~~ 126 (542)
T PRK06018 116 ITDLTFVPILE 126 (542)
T ss_pred EEccccHHHHH
Confidence 88766555443
No 235
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=39.81 E-value=2.8e+02 Score=24.81 Aligned_cols=71 Identities=10% Similarity=0.112 Sum_probs=47.8
Q ss_pred HHHHHHHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHhc------C--CeEEEccCC---CCHHHHHHHHHhcCccEEE
Q psy2417 124 ARNFGSGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYCY------S--MIIVALYDT---LGPDACAFIINQAEISVLI 191 (391)
Q Consensus 124 ~~~la~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~------G--~~~vpl~~~---~~~~~l~~il~~~~~~~vi 191 (391)
.+++.+.+.+.+ +.+|++|+|...-+.+.++.+..+... | ..++-++.. +..+.+..+.+..+....+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 345555666654 677999999999999998877666432 2 244455553 3445567777888887776
Q ss_pred EcC
Q psy2417 192 VDD 194 (391)
Q Consensus 192 ~~~ 194 (391)
.+.
T Consensus 93 ~~~ 95 (258)
T PRK10696 93 EEQ 95 (258)
T ss_pred EEe
Confidence 654
No 236
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.69 E-value=2.1e+02 Score=28.52 Aligned_cols=85 Identities=9% Similarity=-0.031 Sum_probs=61.7
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|+..+...+..+...+....+.+++++...++-.-.+ +...++++..|+..+..+. ....+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 689999887776665554322378889988877754433 3344788889998887654 6788899999999999888
Q ss_pred ChHHHHHH
Q psy2417 353 VPRLLNRM 360 (391)
Q Consensus 353 ~P~~l~~l 360 (391)
.+.....+
T Consensus 121 ~~~~~~~~ 128 (542)
T PRK07786 121 EAALAPVA 128 (542)
T ss_pred ccchHHHH
Confidence 77655443
No 237
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=39.66 E-value=1.8e+02 Score=28.60 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=44.2
Q ss_pred CCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC----C-CHHhHHHHHHhcCCcEEecChHHH
Q psy2417 297 PKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS----G-DIKNLTEDMKTLKPTIMPAVPRLL 357 (391)
Q Consensus 297 ~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~----~-~~~~l~~~i~~~~~t~~~~~P~~l 357 (391)
..++|+++.--|-++..-. ..-..|..++-++ + +++.|.+.+++++|..++++|++-
T Consensus 176 ~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 6689999999998774433 2234577777653 2 899999999999999999999863
No 238
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=39.40 E-value=1.8e+02 Score=27.73 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=45.6
Q ss_pred CCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChH
Q psy2417 297 PKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 297 ~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
+..+|++...++-+.. .....++.+..|+..+..+. ....+...+++.++..+...+.
T Consensus 21 ~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 21 IRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8899999998887753 33345788999998888765 6788888999999998876554
No 239
>KOG0633|consensus
Probab=38.57 E-value=39 Score=30.30 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=70.6
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHH
Q psy2417 78 LYDDVKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQ 157 (391)
Q Consensus 78 ~~~~~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~l 157 (391)
+.+++.++.+.+.+-.-..+|.+|++.... .+...+...-.-||.-=.+.+|.+..+.+.--
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsD------------------E~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A 128 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSD------------------ELIDLIIRCVCDPGKEKILDCPPTYSMYVVDA 128 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcH------------------HHHHHHHhheecCCccceeecCCcceeEEEEe
Confidence 445666676666655555778888877652 23333444445677433467788888888888
Q ss_pred HHHhcCCeEEEccCCC--CHHHHHHHHHh-cCccEEEEcCC
Q psy2417 158 GAYCYSMIIVALYDTL--GPDACAFIINQ-AEISVLIVDDD 195 (391)
Q Consensus 158 A~~~~G~~~vpl~~~~--~~~~l~~il~~-~~~~~vi~~~~ 195 (391)
++.-++.+-||++|++ ..+++..+++. +.++++|..+.
T Consensus 129 ~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 129 AINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred ecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 8999999999999876 56788888864 58999998765
No 240
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=38.52 E-value=1.8e+02 Score=27.64 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccC-----CCCHHHHHHHHHh---cCccEEEEc
Q psy2417 125 RNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYD-----TLGPDACAFIINQ---AEISVLIVD 193 (391)
Q Consensus 125 ~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~-----~~~~~~l~~il~~---~~~~~vi~~ 193 (391)
..+...+..+++++||.|.+-.+. +....-++...|+.++.++. ....+.+...++. .+.++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 445555566678899988776554 44445667788987665543 2567888888864 356666643
No 241
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=38.31 E-value=1.7e+02 Score=29.49 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=60.2
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|.+.+...+..+...+....+.++|++...++-+..+-. ..++++..|+.++..+. ..+.+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~-~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLE-WLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 58999998877666665432228899999999886554332 23678888998887765 7889999999999999887
Q ss_pred ChH
Q psy2417 353 VPR 355 (391)
Q Consensus 353 ~P~ 355 (391)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 654
No 242
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=37.41 E-value=3e+02 Score=30.47 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=72.8
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|.+.. .| -.+|.+.+...+......+... ..++|++...+|-+..+-. ..++++..|+..+..+.
T Consensus 628 ~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~-~~~g~~V~i~~~n~~~~~~-~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 628 NWSRLAVADS-TG-------GELSYGKALTGALALARLLKRE-LKDEENVGILLPPSVAGAL-ANLALLLAGKVPVNLNY 697 (1146)
T ss_pred cCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHh-CCCCCeEEEECCCchHHHH-HHHHHHHcCCEEEEeCC
Confidence 5777777632 12 2589999988877776665432 6789999999887654332 34788999998877655
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~~l~ 361 (391)
.++++...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 6789999999999999998888776654
No 243
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=36.82 E-value=1.9e+02 Score=28.27 Aligned_cols=82 Identities=7% Similarity=-0.029 Sum_probs=59.4
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
-.+|...+...+..+...+....+.+++++....+-+..+- ...++++..|+.++..+. ....+...+++.++..++
T Consensus 24 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii 102 (502)
T TIGR01734 24 QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML-VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVI 102 (502)
T ss_pred cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH-HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEE
Confidence 36899999887776665543222678888888877765443 334788999998876655 567788899999999988
Q ss_pred cChHH
Q psy2417 352 AVPRL 356 (391)
Q Consensus 352 ~~P~~ 356 (391)
.....
T Consensus 103 ~~~~~ 107 (502)
T TIGR01734 103 HTAEL 107 (502)
T ss_pred ecccc
Confidence 76543
No 244
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=36.65 E-value=1.8e+02 Score=28.38 Aligned_cols=79 Identities=13% Similarity=0.038 Sum_probs=56.7
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|+..+...+......+......+++++....+-+.. .+...++++..|+..+..+. ....+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 58999998877666655432226778999888875543 22334788888888876654 6678888889989888886
Q ss_pred Ch
Q psy2417 353 VP 354 (391)
Q Consensus 353 ~P 354 (391)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 245
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=36.52 E-value=1.3e+02 Score=29.38 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=37.0
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCC-----CCHHHHHHHHHhcCccEEEEc
Q psy2417 134 LGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDT-----LGPDACAFIINQAEISVLIVD 193 (391)
Q Consensus 134 ~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~vi~~ 193 (391)
.++++|+.|.+-.+. |.....++...|+.++.++.+ ...+.+...+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 488999988765543 455556777789887766542 356777777643 56666654
No 246
>KOG0331|consensus
Probab=36.50 E-value=2.5e+02 Score=28.14 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhc---CccEEEEcC
Q psy2417 122 LRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQA---EISVLIVDD 194 (391)
Q Consensus 122 ~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~---~~~~vi~~~ 194 (391)
++.+++-..|.+..-.++.+|.|++..--.-=-......+.|.-.+.|+-+.++++-...|+.. +..++++.+
T Consensus 324 ~K~~~l~~lL~~~~~~~~~KvIIFc~tkr~~~~l~~~l~~~~~~a~~iHGd~sQ~eR~~~L~~FreG~~~vLVATd 399 (519)
T KOG0331|consen 324 AKLRKLGKLLEDISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGDKSQSERDWVLKGFREGKSPVLVATD 399 (519)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecchhhHHHHHHHHHhcCcceeeecccccHHHHHHHHHhcccCCcceEEEcc
Confidence 3444555555554334566788888744333333334445567778899999999988888865 355666544
No 247
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.98 E-value=3.1e+02 Score=27.39 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=66.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
.++.+|++. . +..+|...+...+..+...+.. ..+..++++....+-...+ +...++++..|+..+.++
T Consensus 36 ~p~~~a~~~--~-------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~ 105 (560)
T PRK08974 36 YADQPAFIN--M-------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVN 105 (560)
T ss_pred CCCCceEEE--C-------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccC
Confidence 356667653 1 2367888888777666665421 1278889988887654322 223378889999988776
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNR 359 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~ 359 (391)
. ....+.+.+++.++..+...+.....
T Consensus 106 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~ 134 (560)
T PRK08974 106 PLYTPRELEHQLNDSGAKAIVIVSNFAHT 134 (560)
T ss_pred ccCCHHHHHHHHHhcCceEEEEeccccHH
Confidence 5 67888999999999999887655443
No 248
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=35.97 E-value=1.1e+02 Score=25.79 Aligned_cols=48 Identities=0% Similarity=-0.186 Sum_probs=36.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHh
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYC 161 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~ 161 (391)
..+||.|+.+.+.++|..+.+. ++....+.|...++-..++..+|-..
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~l 62 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPRL 62 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHHc
Confidence 6799999999999999999875 22223466777777777777776433
No 249
>PLN00011 cysteine synthase
Probab=35.84 E-value=3.5e+02 Score=25.10 Aligned_cols=71 Identities=13% Similarity=0.021 Sum_probs=48.8
Q ss_pred HHHHHHHHHhCC-CCCC-CeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 124 ARNFGSGLLGLG-VNPG-SFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 124 ~~~la~~L~~~g-v~~g-~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+..+-....+.| +.|| +.|. ....+-.-...-+++...|.....+-|...++.....++..++++++++..
T Consensus 52 a~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 52 AYSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 333333444455 6777 4553 466666666677788889987666666555577788899999999999864
No 250
>PLN00175 aminotransferase family protein; Provisional
Probab=35.59 E-value=4.1e+02 Score=25.58 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=17.3
Q ss_pred CCCCCCcEEEeehhHHHHHHHHHH
Q psy2417 266 GTTGNPKGVMLTHGNVIAAISAAL 289 (391)
Q Consensus 266 GSTG~PKgV~~th~~l~~~~~~~~ 289 (391)
|-+|.--|.++....++..+....
T Consensus 262 ~~~G~RiG~~v~~~~l~~~l~~~~ 285 (413)
T PLN00175 262 SLTGWKIGWAIAPPHLTWGVRQAH 285 (413)
T ss_pred cCcchheeeeEeCHHHHHHHHHHH
Confidence 346777799999888877665544
No 251
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=35.49 E-value=5.3e+02 Score=27.34 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC---CCCCCC-----------CEEEEcCChHHHHHHHHH-
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD---HRPKYS-----------DVLISFLPLAHMLERTCE- 318 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~---~~~~~~-----------d~~l~~~pl~h~~g~~~~- 318 (391)
.++.+|++.... |.+ ...+|.+.+...+..+...+.. .-+.++ |++..+++-+. .+...
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVAD 147 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHH
Confidence 456777764322 211 2468999888877666554431 016665 88888887543 33333
Q ss_pred HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEecChHHHHHHHHH
Q psy2417 319 SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPAVPRLLNRMYDK 363 (391)
Q Consensus 319 ~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~~P~~l~~l~~~ 363 (391)
++++..|+..+-... .++.+...+..-++.++++.+..+..+.+.
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~ 194 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLER 194 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHh
Confidence 788999998887644 789999999999999999888877776543
No 252
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=35.47 E-value=3.1e+02 Score=28.42 Aligned_cols=102 Identities=7% Similarity=-0.127 Sum_probs=68.2
Q ss_pred CCCceEEEe--cCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC
Q psy2417 255 PTDLCTICY--TSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS 332 (391)
Q Consensus 255 ~~~~a~i~~--TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~ 332 (391)
++.+++... ..|..|.. ..+|.+.+...+..+...+....+.++|++..+++-+...-. ..++++..|+..+-..
T Consensus 56 p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~-~~lA~~~~G~v~vpl~ 132 (660)
T PLN02430 56 PDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIV-AMEACAAHSLICVPLY 132 (660)
T ss_pred CCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCeEEEec
Confidence 455665432 23433322 346899888877666655432228899999888886553222 2378889998888654
Q ss_pred C--CHHhHHHHHHhcCCcEEecChHHHHH
Q psy2417 333 G--DIKNLTEDMKTLKPTIMPAVPRLLNR 359 (391)
Q Consensus 333 ~--~~~~l~~~i~~~~~t~~~~~P~~l~~ 359 (391)
. .++.+...+...++++++.....+..
T Consensus 133 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~ 161 (660)
T PLN02430 133 DTLGPGAVDYIVDHAEIDFVFVQDKKIKE 161 (660)
T ss_pred cCCCHHHHHHHHhccCCCEEEECHHHHHH
Confidence 4 78899999999999999987654433
No 253
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=35.42 E-value=4e+02 Score=27.14 Aligned_cols=96 Identities=17% Similarity=0.082 Sum_probs=66.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++++.. +..| ....+|.+.+...+......+....+.++|++...++-+..+-. ..++++..|+.++..+.
T Consensus 52 ~p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~-~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHAL-LALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH-HHHHHHHcCCeEeeecc
Confidence 4566776543 1122 23578999998887776665532227889999988887654332 33788899999887754
Q ss_pred --C-----HHhHHHHHHhcCCcEEecCh
Q psy2417 334 --D-----IKNLTEDMKTLKPTIMPAVP 354 (391)
Q Consensus 334 --~-----~~~l~~~i~~~~~t~~~~~P 354 (391)
. ...+...++..++..++...
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 2 57888899999999988754
No 254
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=35.35 E-value=2.9e+02 Score=27.13 Aligned_cols=86 Identities=9% Similarity=0.008 Sum_probs=62.0
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|...+...+......+....+.++|++..++|-...+- ...++++..|+..+..+. ....+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFF-EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 5688888666655555443222789999998888665432 333788888988887765 6788999999999999998
Q ss_pred ChHHHHHHH
Q psy2417 353 VPRLLNRMY 361 (391)
Q Consensus 353 ~P~~l~~l~ 361 (391)
.......+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 877666554
No 255
>PRK07638 acyl-CoA synthetase; Validated
Probab=35.11 E-value=2.5e+02 Score=27.38 Aligned_cols=80 Identities=9% Similarity=-0.060 Sum_probs=57.6
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCH-HHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEE
Q psy2417 112 YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCP-EWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVL 190 (391)
Q Consensus 112 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~-e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v 190 (391)
...+|.+.+...+.... ...++++++++....+-.. .++...+..+..|+..+.. +.+.++++...+++.++.++
T Consensus 160 gv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 160 AFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 45678877765554443 3456888998887766433 3355666777888887755 56788999999999999999
Q ss_pred EEcCC
Q psy2417 191 IVDDD 195 (391)
Q Consensus 191 i~~~~ 195 (391)
.....
T Consensus 236 ~~~P~ 240 (487)
T PRK07638 236 YTVPT 240 (487)
T ss_pred EeCcH
Confidence 88775
No 256
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.00 E-value=2.2e+02 Score=28.60 Aligned_cols=84 Identities=11% Similarity=0.050 Sum_probs=60.7
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
-.+|...+...+..+...+....+..+|++...++-...+ +...++++..|+..+..+. ....+...++..+++.++
T Consensus 48 ~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii 126 (563)
T PRK06710 48 KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVIL 126 (563)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEE
Confidence 3589999888777666655322277889999888876543 2334788888887776654 678888999999999998
Q ss_pred cChHHHH
Q psy2417 352 AVPRLLN 358 (391)
Q Consensus 352 ~~P~~l~ 358 (391)
..+....
T Consensus 127 ~~~~~~~ 133 (563)
T PRK06710 127 CLDLVFP 133 (563)
T ss_pred Eeccchh
Confidence 8765443
No 257
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=34.82 E-value=1.7e+02 Score=27.80 Aligned_cols=62 Identities=23% Similarity=0.272 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCC-----CCHHHHHHHHHhcCccEEE
Q psy2417 126 NFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDT-----LGPDACAFIINQAEISVLI 191 (391)
Q Consensus 126 ~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~vi 191 (391)
.+...|...++++|+.|.+-.+ .|.....++...|+.++.++.+ ...+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 4445556667899998876543 3444556677789887766432 467788887753 566666
No 258
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=34.55 E-value=2e+02 Score=25.18 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=36.4
Q ss_pred CeEEEEccCCHHHHHHHHHHHhcCC-eEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 140 SFVGIYSQNCPEWIITEQGAYCYSM-IIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 140 ~~V~i~~~~s~e~i~~~lA~~~~G~-~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+.|.+..+.+...--.+--+-..|+ +-+.++|..|.+.+.++|.+.+.-++.+...
T Consensus 86 d~It~H~E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMsVnP 142 (220)
T COG0036 86 DIITFHAEATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMSVNP 142 (220)
T ss_pred CEEEEEeccCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEeECC
Confidence 4555555533333333333333343 3377899999999999999999888887544
No 259
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=34.35 E-value=1e+02 Score=23.36 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCC
Q psy2417 126 NFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSM 164 (391)
Q Consensus 126 ~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~ 164 (391)
.+...+...|+.+++.|.+++.++.....+...+...|.
T Consensus 65 ~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 65 ELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 455667778888899999999887776666667777776
No 260
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.71 E-value=5.3e+02 Score=26.31 Aligned_cols=103 Identities=13% Similarity=0.032 Sum_probs=69.6
Q ss_pred CCCCceEEEec--CCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEe
Q psy2417 254 KPTDLCTICYT--SGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYY 331 (391)
Q Consensus 254 ~~~~~a~i~~T--SGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~ 331 (391)
.++.++++... ++..|. ...+|.+.+...+..+...+... +.++|++...++-+..+-. ..++++..|+.++-.
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~-~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLI-AFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHH-HHHHHHHcCCEEEee
Confidence 35666765432 222232 34689999988887777666432 6789999988876643322 237888889887754
Q ss_pred -CC-C---HHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 332 -SG-D---IKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 332 -~~-~---~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
+. . ...+...++..++..++........+
T Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 143 (631)
T PRK07769 110 FDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGV 143 (631)
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEEChHHHHHH
Confidence 22 2 46788899999999999887765554
No 261
>PRK07868 acyl-CoA synthetase; Validated
Probab=33.45 E-value=4.4e+02 Score=28.96 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=67.2
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. . +..+|.+.+...+..+...+....+.++|++..+++-+-.+- ...++++..|+..+..+.
T Consensus 460 ~pd~~Al~~-~--------~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v-~a~lA~~~aGav~vpl~p 529 (994)
T PRK07868 460 APKGEFLLF-D--------GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSAL-VAIAALSRLGAVAVLMPP 529 (994)
T ss_pred CCCCeEEEe-C--------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHhcCCEEEEeCC
Confidence 466677653 1 135899999887776666553222788999998887554322 234788999999888776
Q ss_pred CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 ~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
+ ..+...++..++..++.-+..+..+
T Consensus 530 ~-~~l~~il~~s~~~~li~~~~~~~~~ 555 (994)
T PRK07868 530 D-TDLAAAVRLGGVTEIITDPTNLEAA 555 (994)
T ss_pred c-hhHHHHHhccCCeEEEEChHHHHHH
Confidence 4 5677788888999988877766554
No 262
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=33.36 E-value=3.6e+02 Score=25.00 Aligned_cols=64 Identities=8% Similarity=-0.065 Sum_probs=45.9
Q ss_pred HHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 131 LLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 131 L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+.+.|..+++.|... ..+-.-....++|.+.|...+.+-|...+......++..++++++++..
T Consensus 43 a~~~g~~~~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 43 SAKQGLNECVHVVCS-SGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHHhhcccCCeEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 333444445555444 4566666667888899998777777767777888899999999999764
No 263
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=33.31 E-value=3.4e+02 Score=26.83 Aligned_cols=92 Identities=14% Similarity=0.071 Sum_probs=63.6
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.++.+. + +..+|++.+...+......+....+.+++++...++-...+-. ..++++..|+..+....
T Consensus 36 ~p~~~a~~~---~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~-~~la~~~~G~~~v~~~~ 105 (527)
T TIGR02275 36 YPDAIAIIC---G------NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYI-VFFALLKLGIAPVLALF 105 (527)
T ss_pred CCCceEEEe---C------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHH-HHHHHHHcCeEEecccc
Confidence 456666653 1 2368999998877766665432237889999988865543332 23678888888775543
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.+..+...+++.++..+...+.
T Consensus 106 ~~~~~~~~~~l~~~~~~~li~~~~ 129 (527)
T TIGR02275 106 SHRKSELTAYAQQIEPALYIIDRA 129 (527)
T ss_pred ccCHHHHHHHHHhcCCcEEEEcCc
Confidence 6788999999999999887654
No 264
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=32.58 E-value=2.7e+02 Score=26.97 Aligned_cols=92 Identities=11% Similarity=-0.010 Sum_probs=64.9
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. .+..+|++.+...+..+...+....+.++|++....+-...+- ...++++..|+..+..+.
T Consensus 16 ~~~~~a~~~---------~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~-~~~la~~~~G~~~v~~~~ 85 (458)
T PRK09029 16 RPQAIALRL---------NDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL-LAYLALLQCGARVLPLNP 85 (458)
T ss_pred CCCceeeec---------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCEEeecCC
Confidence 456666652 1346899999888877766553223788999988877655333 334788899999888765
Q ss_pred --CHHhHHHHHHhcCCcEEecChH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPR 355 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~ 355 (391)
.++.+...+.+.++.++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~ 109 (458)
T PRK09029 86 QLPQPLLEELLPSLTLDFALVLEG 109 (458)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 6778888899999988876543
No 265
>PRK09192 acyl-CoA synthetase; Validated
Probab=31.67 E-value=4.3e+02 Score=26.63 Aligned_cols=88 Identities=15% Similarity=-0.037 Sum_probs=62.4
Q ss_pred EEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC---------CHHhHHHHHH
Q psy2417 273 GVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG---------DIKNLTEDMK 343 (391)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~---------~~~~l~~~i~ 343 (391)
.-.+|...+...+..+...+....+.++|++..+++-+-.+ +...++++..|+..+..+. ..+.+...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF-VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH-HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 35689999887766655544322278999999998874432 3334788899998887742 1578889999
Q ss_pred hcCCcEEecChHHHHHHH
Q psy2417 344 TLKPTIMPAVPRLLNRMY 361 (391)
Q Consensus 344 ~~~~t~~~~~P~~l~~l~ 361 (391)
+.++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999988776554443
No 266
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=31.60 E-value=3.8e+02 Score=26.17 Aligned_cols=68 Identities=9% Similarity=-0.026 Sum_probs=47.2
Q ss_pred HHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 127 FGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 127 la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+-....+.|. .+|+.| +.+..+-.-....++|.+.|..+..+-|...++.-...++..++++++++..
T Consensus 49 ~l~~a~~~g~~~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 49 MIEDAEASGRLKPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred HHHHHHHcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 3333444554 667665 4456666667777788889997776666555566777889999999999753
No 267
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=31.53 E-value=2.5e+02 Score=27.90 Aligned_cols=79 Identities=10% Similarity=-0.026 Sum_probs=57.7
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|...+...+......+....+.++|++...++-+..+-. ..++++..|+.++..+. ....+...++..++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPI-NFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH-HHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 58999887777666654432238899999998886553332 34678888888886654 6788999999999998876
Q ss_pred Ch
Q psy2417 353 VP 354 (391)
Q Consensus 353 ~P 354 (391)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 54
No 268
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=31.05 E-value=4.5e+02 Score=27.40 Aligned_cols=89 Identities=6% Similarity=-0.044 Sum_probs=65.1
Q ss_pred cEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCC--CHHhHHHHHHhcCCc
Q psy2417 272 KGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSG--DIKNLTEDMKTLKPT 348 (391)
Q Consensus 272 KgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t 348 (391)
....+|++.+...+..+...+....+.++|++..+++-+. .+... ++++..|+..+-... .++.+...++..++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 4578899999887766655543222789999998888654 33333 788888988775543 788899999999999
Q ss_pred EEecChHHHHHHHH
Q psy2417 349 IMPAVPRLLNRMYD 362 (391)
Q Consensus 349 ~~~~~P~~l~~l~~ 362 (391)
.+++....+..+.+
T Consensus 196 ~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 196 AIVCNGKNVPNLLR 209 (700)
T ss_pred EEEECHHHHHHHHH
Confidence 99987776665544
No 269
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=29.78 E-value=1.4e+02 Score=28.88 Aligned_cols=50 Identities=20% Similarity=0.125 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCeEEEEcc-CCHHHHHHHH-HHHhcCCeEEEc
Q psy2417 120 ALLRARNFGSGLLGL--GVNPGSFVGIYSQ-NCPEWIITEQ-GAYCYSMIIVAL 169 (391)
Q Consensus 120 l~~~~~~la~~L~~~--gv~~g~~V~i~~~-~s~e~i~~~l-A~~~~G~~~vpl 169 (391)
+..+.+++|..|.+. ++++|+.|.|-++ ...+++-++. .+.++|+..|-+
T Consensus 3 ~~~~l~kyA~llV~~glnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v 56 (398)
T PF02073_consen 3 FDERLEKYAELLVKYGLNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIV 56 (398)
T ss_dssp HHHHHHHHHHHHHHTTT---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEE
T ss_pred chHHHHHHHHHHHHhccCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEE
Confidence 467888999999875 6899999999998 4456665554 778889844433
No 270
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=29.54 E-value=4.6e+02 Score=24.24 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=45.4
Q ss_pred HhCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 132 LGLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 132 ~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
.+.| ++||+.| |=...+---+...+.+...|...+.+-|..-..+-..+|+..++++++++..
T Consensus 54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~ 117 (300)
T COG0031 54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGA 117 (300)
T ss_pred HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 3446 8888844 4444444555555667777887777777676777788999999999999983
No 271
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=29.43 E-value=3.9e+02 Score=23.39 Aligned_cols=69 Identities=14% Similarity=0.006 Sum_probs=47.5
Q ss_pred HHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 126 NFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 126 ~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
.+...+.+.|..+++.| +....+-.-....++|...|...+.+-|...+......++..+++++.++..
T Consensus 37 ~~l~~a~~~g~~~~~~v-v~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 37 NLILLAEEEGKLPKGVI-IESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHHHHHcCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 33444444443344544 4444456666666777779998877777777788888899999999999875
No 272
>PRK06060 acyl-CoA synthetase; Validated
Probab=29.36 E-value=3.7e+02 Score=27.95 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=65.5
Q ss_pred CCCCceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC
Q psy2417 254 KPTDLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG 333 (391)
Q Consensus 254 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~ 333 (391)
.++.+|++. + . .+|++.+...+..+...+....+.++|++..+++-+..+-. ..++++..|+..+..+.
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~-~~la~~~aG~~~vpi~p 87 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQ-LLLACLARGVMAFLANP 87 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEecCC
Confidence 467777652 2 1 48999998777666555432238899999999887654433 33688889988777655
Q ss_pred --CHHhHHHHHHhcCCcEEecChHHHH
Q psy2417 334 --DIKNLTEDMKTLKPTIMPAVPRLLN 358 (391)
Q Consensus 334 --~~~~l~~~i~~~~~t~~~~~P~~l~ 358 (391)
....+...+++.++.+++.......
T Consensus 88 ~~~~~~l~~~l~~~~~~~vi~~~~~~~ 114 (705)
T PRK06060 88 ELHRDDHALAARNTEPALVVTSDALRD 114 (705)
T ss_pred CCCHHHHHHHHhcCCCcEEEEchHHhh
Confidence 5677888888889988877655443
No 273
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=29.16 E-value=1.3e+02 Score=28.03 Aligned_cols=55 Identities=15% Similarity=0.018 Sum_probs=43.1
Q ss_pred eEEeHHHHHHH------HHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEE
Q psy2417 113 QWIHYNQALLR------ARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIV 167 (391)
Q Consensus 113 ~~~Ty~el~~~------~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~v 167 (391)
..+.|.++.+. .+.+...+.++|+.+++.|.++|..+.....+++++..+|..-|
T Consensus 237 vnip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 237 KCVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred cccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 34667766443 46677778889999999999999999888888888888996533
No 274
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=28.15 E-value=60 Score=22.49 Aligned_cols=30 Identities=23% Similarity=0.237 Sum_probs=18.2
Q ss_pred EeHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q psy2417 115 IHYNQALLRARNFGSGLLGLGVNPGSFVGI 144 (391)
Q Consensus 115 ~Ty~el~~~~~~la~~L~~~gv~~g~~V~i 144 (391)
+.|=+-.-+..-+-..|+++|+++||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 444444445555667888889999999976
No 275
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=28.15 E-value=4.9e+02 Score=24.36 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=16.5
Q ss_pred CCCCCCcEEEeehhHHHHHHH
Q psy2417 266 GTTGNPKGVMLTHGNVIAAIS 286 (391)
Q Consensus 266 GSTG~PKgV~~th~~l~~~~~ 286 (391)
|.+|.+-|.++....++..+.
T Consensus 231 g~~GlRiG~~~~~~~~~~~l~ 251 (368)
T PRK03317 231 AFAGGRLGYLAAAPAVVDALR 251 (368)
T ss_pred ccchhhhhhhhCCHHHHHHHH
Confidence 567888899998888876654
No 276
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=28.15 E-value=69 Score=22.21 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEE
Q psy2417 123 RARNFGSGLLGLGVNPGSFVGIY 145 (391)
Q Consensus 123 ~~~~la~~L~~~gv~~g~~V~i~ 145 (391)
+..-+-..|+++|+++||.|-|.
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 41 KKLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHCCHHHHHHHcCCCCCCEEEEc
Confidence 33345567788899999999875
No 277
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=27.70 E-value=5.1e+02 Score=24.19 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=16.3
Q ss_pred CCCCCCcEEEeehhHHHHHHHH
Q psy2417 266 GTTGNPKGVMLTHGNVIAAISA 287 (391)
Q Consensus 266 GSTG~PKgV~~th~~l~~~~~~ 287 (391)
|..|..-|.++....++..+..
T Consensus 228 g~~G~RiG~l~~~~~~~~~l~~ 249 (367)
T PRK02731 228 GLAGLRVGYGIAPPEIIDALNR 249 (367)
T ss_pred cCcccceeeeeCCHHHHHHHHH
Confidence 5567777999998887766553
No 278
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=27.68 E-value=1.5e+02 Score=25.20 Aligned_cols=45 Identities=7% Similarity=-0.108 Sum_probs=30.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
..+||.|+.+++.++|..+.+. .+....|.+...++--..++.++
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~~L~ 54 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLADLV 54 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHHHHH
Confidence 5799999999999999999875 22222445555555544444444
No 279
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=27.64 E-value=2.4e+02 Score=23.79 Aligned_cols=62 Identities=18% Similarity=0.042 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q psy2417 82 VKTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGI 144 (391)
Q Consensus 82 ~~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i 144 (391)
.....+-+....+.+|....++...........+.-+==.+|++.++.+|...|+.++ +|.+
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~ 159 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RIST 159 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEE
Confidence 3345667777788898666655543211112223333335799999999999999887 5544
No 280
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=26.96 E-value=1.2e+02 Score=24.95 Aligned_cols=45 Identities=16% Similarity=-0.061 Sum_probs=30.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHH
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~ 160 (391)
..+||.|+.+.++++|..+.+.| .+ +.| +...++--...+.++-.
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~-~~-d~v-vgv~~GG~~fa~~L~~~ 52 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG-QW-KGI-IAVTRGGLVPAAILARE 52 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC-CC-CEE-EEEecCCeehHHHHHHH
Confidence 56899999999999999998775 32 333 44444444444444433
No 281
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=26.93 E-value=5.7e+02 Score=25.80 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=69.4
Q ss_pred CceEEEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcC-CCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeC--C
Q psy2417 257 DLCTICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSD-HRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYS--G 333 (391)
Q Consensus 257 ~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~--~ 333 (391)
+-..|+|-+-.++. -.+|.+.+...+......+.. .-. ++||++.++|.....-.. .++++-.|+-...+. .
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGL 99 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCC
Confidence 33455555544444 689999998888777666532 114 899999999987654332 257777776544432 2
Q ss_pred CHHhHHHHHHhcCCcEEecChHHHHHH
Q psy2417 334 DIKNLTEDMKTLKPTIMPAVPRLLNRM 360 (391)
Q Consensus 334 ~~~~l~~~i~~~~~t~~~~~P~~l~~l 360 (391)
.++.+..-+...++.+++.....++..
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 899999999999999999877777654
No 282
>PRK08308 acyl-CoA synthetase; Validated
Probab=26.92 E-value=5.5e+02 Score=24.36 Aligned_cols=96 Identities=9% Similarity=-0.016 Sum_probs=65.7
Q ss_pred cCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCH--HHHHHHHHHHhcCCeEEEcc
Q psy2417 96 SNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCP--EWIITEQGAYCYSMIIVALY 170 (391)
Q Consensus 96 ~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~--e~i~~~lA~~~~G~~~vpl~ 170 (391)
.++.++++.... .+.+ ...+|++.+...+..+... .++.+++++..+++-.. .++..++..+..|+..+...
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 455666665432 2222 4568999887766555544 45677888877777543 34566788889998877664
Q ss_pred CCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 171 DTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 171 ~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
...++.+...+++.++.+++....
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 456788888999999988877654
No 283
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=26.70 E-value=6.1e+02 Score=24.78 Aligned_cols=101 Identities=13% Similarity=0.023 Sum_probs=57.5
Q ss_pred EEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcc-CCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 114 WIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQ-NCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 114 ~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~-~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
..|..+...+...+-....-.|+.+|++++++.. ++ ...- ++..........+-.-+.++....|++.++.++++
T Consensus 118 ~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly~---~~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g 193 (430)
T TIGR02304 118 VVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLYQ---SVNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVA 193 (430)
T ss_pred EECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHHH---HHHhccceeeecCCCcCHHHHHHHHHHhCCCEEEE
Confidence 3555555444333322333348888999999953 33 1111 12222222344444567889999999999999999
Q ss_pred cCCcchhHHHhhcc-----cCccEEEEecCcc
Q psy2417 193 DDDSKCNQIIDRAP-----RCLKKIISIREVR 219 (391)
Q Consensus 193 ~~~~~~~~~~~~~~-----~~l~~ii~~~~~~ 219 (391)
.... +..+..... -.++.|++..+.-
T Consensus 194 ~pS~-l~~LA~~~~~~~l~~~~k~ii~~~E~l 224 (430)
T TIGR02304 194 PPSV-LRALALEVMEGELTIKPKKVISVAEVL 224 (430)
T ss_pred cHHH-HHHHHHHHHhcCCCCCceEEEEccCCC
Confidence 8763 333332211 1567787776543
No 284
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=26.52 E-value=6e+02 Score=24.64 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=46.3
Q ss_pred CCeEEEEccCCHHHHHHHHHHHhcCCeEEEc--cCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 139 GSFVGIYSQNCPEWIITEQGAYCYSMIIVAL--YDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 139 g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl--~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
|-+|+.|++=.++..+.+..+...|+-+..- +|-...+++...|...+..+.-....
T Consensus 32 G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~ 90 (406)
T TIGR00936 32 GARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGE 90 (406)
T ss_pred CCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCC
Confidence 8899999999999999988888999865544 78788889999998888886654443
No 285
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=26.45 E-value=1.7e+02 Score=27.73 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeec-----CCCCceEEeHHHHHHHHHHH---HHHHH---------hCCCCCCCeEEEE
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQN-----ISRPYQWIHYNQALLRARNF---GSGLL---------GLGVNPGSFVGIY 145 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~-----~~~~~~~~Ty~el~~~~~~l---a~~L~---------~~gv~~g~~V~i~ 145 (391)
+++.++=+.--+..||.+|+--++. .++....++..|..+.-+.. +.++. +.|++||+
T Consensus 25 ~SveeVrr~I~~~~PDaVAVELd~~R~~sLl~~~~~~ldl~~vlk~Gk~~~~l~~~lLa~~Qrklg~~~Gv~PGs----- 99 (388)
T COG1916 25 DSVEEVRRIILEEKPDAVAVELDEARLLSLLGGSREELDLAQVLKEGKAFFLLAGLLLAYFQRKLGKELGVKPGS----- 99 (388)
T ss_pred hHHHHHHHHHHhcCCCeEEEEecHHHHHHHhcCCcccCCHHHHHHcCchHHHHHHHHHHHHHHHHHHhcCCCChH-----
Confidence 4555555555677999999986653 12222368888877544433 22221 23777764
Q ss_pred ccCCHHHHHHHHHHHhcCCeEEEccCCCC
Q psy2417 146 SQNCPEWIITEQGAYCYSMIIVALYDTLG 174 (391)
Q Consensus 146 ~~~s~e~i~~~lA~~~~G~~~vpl~~~~~ 174 (391)
|+..|+-++...|+.+.++|-+..
T Consensus 100 -----Emk~AIe~A~e~ga~V~lIDRdI~ 123 (388)
T COG1916 100 -----EMKAAIEAARELGAPVALIDRDIG 123 (388)
T ss_pred -----HHHHHHHHHHHcCCCEEEecccHH
Confidence 999999999999999999987643
No 286
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=26.15 E-value=1.8e+02 Score=22.14 Aligned_cols=28 Identities=11% Similarity=-0.007 Sum_probs=24.2
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCC
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPGS 140 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g~ 140 (391)
-.++|.++.+.++.+|..|.+.+....-
T Consensus 3 i~~~~~~~~~~~~~la~~i~~~~~~~~~ 30 (125)
T PF00156_consen 3 IILSPEQIEALAERLAEQIKESGFDFDV 30 (125)
T ss_dssp EEEBHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred EEEcHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 5789999999999999999998766544
No 287
>PRK10595 SOS cell division inhibitor; Provisional
Probab=25.90 E-value=3.3e+02 Score=22.60 Aligned_cols=66 Identities=11% Similarity=-0.040 Sum_probs=44.5
Q ss_pred HHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEcc--C-CCCHHH---HHHHHHhcCccEEEEc
Q psy2417 128 GSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALY--D-TLGPDA---CAFIINQAEISVLIVD 193 (391)
Q Consensus 128 a~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~--~-~~~~~~---l~~il~~~~~~~vi~~ 193 (391)
+.+|...|+..+..+.|...+..+.+-++-=+++.|..-+.|- | ....+. ++..-+..++-.++.-
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~R 141 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIMR 141 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 5688889999888888877788888888888888886433332 3 666554 4444444555444443
No 288
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=25.85 E-value=4e+02 Score=24.76 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=10.7
Q ss_pred CCCc--EEEeehhHHHHHH
Q psy2417 269 GNPK--GVMLTHGNVIAAI 285 (391)
Q Consensus 269 G~PK--gV~~th~~l~~~~ 285 (391)
|.|. |+++....++..+
T Consensus 189 ~~p~g~G~l~~~~~~~~~~ 207 (356)
T cd06451 189 GAPPGLGPIAFSERALERI 207 (356)
T ss_pred cCCCCcceeEECHHHHHHH
Confidence 5555 6777777766544
No 289
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=25.75 E-value=3.9e+02 Score=23.98 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=33.8
Q ss_pred HHHhcCCe---EEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 158 GAYCYSMI---IVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 158 A~~~~G~~---~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
.|.++|.. ++.+.+.++.+.-..++++.++++++|-++
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~S 206 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKAS 206 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 67787765 889999999999999999999999999665
No 290
>PLN02409 serine--glyoxylate aminotransaminase
Probab=25.10 E-value=4.4e+02 Score=25.27 Aligned_cols=33 Identities=9% Similarity=-0.126 Sum_probs=14.7
Q ss_pred HhcCCeEEEccCCCCHHHHHHHHHhcCccEEEE
Q psy2417 160 YCYSMIIVALYDTLGPDACAFIINQAEISVLIV 192 (391)
Q Consensus 160 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~ 192 (391)
+.-|-.++..++.+.......+++..+.+++.+
T Consensus 81 ~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v 113 (401)
T PLN02409 81 LSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVV 113 (401)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHcCCceEEE
Confidence 334444444444444444444445555554444
No 291
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=24.91 E-value=3.6e+02 Score=23.31 Aligned_cols=71 Identities=15% Similarity=0.052 Sum_probs=48.0
Q ss_pred CCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHH
Q psy2417 97 NNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPD 176 (391)
Q Consensus 97 pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~ 176 (391)
-..+++.+... +...=.++.+.+.++++.|.++| .+.+..-..=-+=++.=++...|+.++-+.|.+..+
T Consensus 14 ~~~i~V~~gs~-----~~~~~~~~~~~a~~lg~~la~~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~~ 83 (205)
T COG1611 14 IRQIVVICGSA-----RGIEPEEYYELARELGRELAKRG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLHE 83 (205)
T ss_pred cceEEEEEeCC-----CCCCCHHHHHHHHHHHHHHHhCC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCchh
Confidence 34556666552 22233338889999999999887 444444444455566668889999999999987665
Q ss_pred H
Q psy2417 177 A 177 (391)
Q Consensus 177 ~ 177 (391)
+
T Consensus 84 ~ 84 (205)
T COG1611 84 Q 84 (205)
T ss_pred h
Confidence 4
No 292
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=24.64 E-value=5.4e+02 Score=23.44 Aligned_cols=66 Identities=11% Similarity=0.010 Sum_probs=45.8
Q ss_pred HHHHhCC-CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 129 SGLLGLG-VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 129 ~~L~~~g-v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
....+.| +.+|+.|.- ...+-.-....++|...|.-...+-|...++.....++..++++++++..
T Consensus 48 ~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 48 VEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred HHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3344445 467776644 55555666666778889987776666665566677899999999999763
No 293
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.58 E-value=1.5e+02 Score=26.86 Aligned_cols=53 Identities=6% Similarity=-0.022 Sum_probs=42.7
Q ss_pred eEEeHHHHHH-----HHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCe
Q psy2417 113 QWIHYNQALL-----RARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMI 165 (391)
Q Consensus 113 ~~~Ty~el~~-----~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~ 165 (391)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3577777763 2466777788889999999999999999999999988888865
No 294
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=24.43 E-value=3.7e+02 Score=26.33 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=29.7
Q ss_pred CCCCCeEEEEccCCHHHHHHHH--HHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQ--GAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~l--A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
+++||.|.+ .++.......++ .+.+.|+.+..++....++.++..++. +.++|+++.
T Consensus 97 l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 97 CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 466676544 233332222221 245566666666665566666666643 455666544
No 295
>PLN02356 phosphateglycerate kinase
Probab=24.41 E-value=6.5e+02 Score=24.59 Aligned_cols=71 Identities=17% Similarity=-0.007 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 123 RARNFGSGLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 123 ~~~~la~~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
-+..+-..+.+.|. .++..|. ....+-.-+...++|...|.-.+.+-|...+.+-..+++..+++++.++.
T Consensus 87 ~A~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 87 VAVKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 33333444444454 3666554 44445556677778888998766665655555557889999999999953
No 296
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=24.34 E-value=2.1e+02 Score=23.69 Aligned_cols=20 Identities=15% Similarity=0.039 Sum_probs=18.8
Q ss_pred EeHHHHHHHHHHHHHHHHhC
Q psy2417 115 IHYNQALLRARNFGSGLLGL 134 (391)
Q Consensus 115 ~Ty~el~~~~~~la~~L~~~ 134 (391)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999875
No 297
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=24.17 E-value=7e+02 Score=25.72 Aligned_cols=98 Identities=12% Similarity=0.035 Sum_probs=71.0
Q ss_pred HhcCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHH-HHHHhcCCeEEEc
Q psy2417 94 KESNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITE-QGAYCYSMIIVAL 169 (391)
Q Consensus 94 ~~~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~-lA~~~~G~~~vpl 169 (391)
...||..|.+.... .+.+ ..-+||+-+...+..+...+. -++++|++.-++|-+.-+--++ .++...|.+.+.-
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 45678888665442 2333 578999999999988888876 5889999999999765444443 5555555555443
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 170 YDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 170 ~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
. .+.+.+..-++..+|.+++.-..
T Consensus 265 ~--~~~~~~~~dl~~~rPt~m~~VPR 288 (613)
T COG1022 265 K--EDPRTLLEDLKEVRPTVMIGVPR 288 (613)
T ss_pred c--CCHHHHHHHHHHhCCeEEeechH
Confidence 3 35688899999999999998664
No 298
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=24.09 E-value=5.6e+02 Score=24.73 Aligned_cols=57 Identities=18% Similarity=0.025 Sum_probs=34.5
Q ss_pred CCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHH-HHHHHHHhcCccEEEEcCC
Q psy2417 138 PGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPD-ACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 138 ~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~-~l~~il~~~~~~~vi~~~~ 195 (391)
.|.+|+|+......+-++-+-.- .|+.++.+-.....+ .....++.......+.+..
T Consensus 273 ~Gkrv~i~gd~~~~~~l~~~L~e-lGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~~ 330 (407)
T TIGR01279 273 RGKKIFFFGDNLLELPLARFLKR-CGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQP 330 (407)
T ss_pred CCCEEEEECCchHHHHHHHHHHH-CCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeCC
Confidence 47889998887655555544444 798888776655433 3355555554444444443
No 299
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=23.74 E-value=3.7e+02 Score=30.37 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=62.2
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|++.+...+......+......++|++..+++-+..+ ....++++..|+..+..+. ....+...++..++.++..
T Consensus 483 ~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~-i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~ 561 (1296)
T PRK10252 483 QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFL-TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLIT 561 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEE
Confidence 589999887776666554322378899999888776543 2344789999999887765 4567788899999999988
Q ss_pred ChHHHHHH
Q psy2417 353 VPRLLNRM 360 (391)
Q Consensus 353 ~P~~l~~l 360 (391)
.......+
T Consensus 562 ~~~~~~~~ 569 (1296)
T PRK10252 562 TADQLPRF 569 (1296)
T ss_pred Ccchhhhc
Confidence 77655443
No 300
>PRK07787 acyl-CoA synthetase; Validated
Probab=23.36 E-value=4.9e+02 Score=25.28 Aligned_cols=73 Identities=5% Similarity=0.004 Sum_probs=55.5
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHH-HHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEe
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTC-ESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMP 351 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~ 351 (391)
.+|.+.+...+..+...+. ++|++..+++-.- .... .++++..|+..+..+. ....+...+++.++..+.
T Consensus 25 ~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il 97 (471)
T PRK07787 25 VLSRSDLAGAATAVAERVA-----GARRVAVLATPTL--ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWL 97 (471)
T ss_pred EEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCH--HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEE
Confidence 5899999888877777653 5688887776553 3333 3788899988887765 678899999999999888
Q ss_pred cCh
Q psy2417 352 AVP 354 (391)
Q Consensus 352 ~~P 354 (391)
..+
T Consensus 98 ~~~ 100 (471)
T PRK07787 98 GPA 100 (471)
T ss_pred ecC
Confidence 765
No 301
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=23.28 E-value=3.7e+02 Score=24.34 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=36.0
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccC----------CCCHHHHHHHHHh-cCccEEEEcC
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYD----------TLGPDACAFIINQ-AEISVLIVDD 194 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~----------~~~~~~l~~il~~-~~~~~vi~~~ 194 (391)
+++|+.|.+.-+.. .....++...|+.++.+++ ..+.+.+...++. .++++++...
T Consensus 96 ~~~gd~Vlv~~~~h---~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~ 162 (294)
T cd00615 96 CGPGDKILIDRNCH---KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITN 162 (294)
T ss_pred CCCCCEEEEeCCch---HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEEC
Confidence 57899887664432 2234556678887666644 3568889888875 4677666543
No 302
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=23.21 E-value=3.9e+02 Score=24.92 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=0.0
Q ss_pred EEecCCCCCCCcEEEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC------C
Q psy2417 261 ICYTSGTTGNPKGVMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG------D 334 (391)
Q Consensus 261 i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~------~ 334 (391)
|+.|+|++. .+......+ ..++|.++...|-+..+.. .+-..|+.++.++- |
T Consensus 84 I~~t~G~~~--------------~i~~~~~~~----~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~i~~~~~~~~d 141 (356)
T PRK04870 84 VLLGNGSDE--------------LIQLLALAC----AKPGATVLAPEPGFVMYRM----SAKLAGLEFVGVPLTADFTLD 141 (356)
T ss_pred EEEcCCHHH--------------HHHHHHHHh----cCCCCEEEECCCCHHHHHH----HHHHcCCEEEEecCCCCCCCC
Q ss_pred HHhHHHHHHhcCCcEEecC-h
Q psy2417 335 IKNLTEDMKTLKPTIMPAV-P 354 (391)
Q Consensus 335 ~~~l~~~i~~~~~t~~~~~-P 354 (391)
++.+.+.+.+.++..++++ |
T Consensus 142 ~~~l~~~~~~~~~~~v~l~~p 162 (356)
T PRK04870 142 LPAMLAAIAEHRPALVFLAYP 162 (356)
T ss_pred HHHHHHHhhcCCCCEEEEcCC
No 303
>PTZ00297 pantothenate kinase; Provisional
Probab=23.17 E-value=6.5e+02 Score=29.11 Aligned_cols=87 Identities=16% Similarity=-0.034 Sum_probs=63.8
Q ss_pred EEeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHH-HHHHHhCcEEEEeCCCHHhHHHHHHhcCCcEEec
Q psy2417 274 VMLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCE-SAMFLVGGSIGYYSGDIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~-~~~L~~G~~vv~~~~~~~~l~~~i~~~~~t~~~~ 352 (391)
..+|.+.+...+..+...+....+.++|++..+++-.- .+... ++++..|+.++-.......+...+...++.++++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~--Ewvia~lA~~~~GaV~VPly~t~~eL~yIL~~S~akvVfv 533 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASR--NIVILEVACALYGFTTLPLVGKGSTMRTLIDEHKIKVVFA 533 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEeCCCCHHHHHHHHHhcCCcEEEE
Confidence 35899988877766555442222889999998888553 33333 7888899888866546678899999999999999
Q ss_pred ChHHHHHHHH
Q psy2417 353 VPRLLNRMYD 362 (391)
Q Consensus 353 ~P~~l~~l~~ 362 (391)
-...+..+.+
T Consensus 534 ~~~~l~kl~~ 543 (1452)
T PTZ00297 534 DRNSVAAILT 543 (1452)
T ss_pred chhHHHHHHh
Confidence 8877776654
No 304
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=22.96 E-value=4.3e+02 Score=25.04 Aligned_cols=23 Identities=17% Similarity=0.086 Sum_probs=16.2
Q ss_pred CCCCCCCcEEEeehhHHHHHHHH
Q psy2417 265 SGTTGNPKGVMLTHGNVIAAISA 287 (391)
Q Consensus 265 SGSTG~PKgV~~th~~l~~~~~~ 287 (391)
-|-+|.--|.++....++..+..
T Consensus 242 ~glaGlRiGy~~~~~~~i~~l~~ 264 (380)
T PLN03026 242 AGLAGLRVGYGAFPLSIIEYLWR 264 (380)
T ss_pred hcCccccceeeecCHHHHHHHHH
Confidence 35677777888888877766543
No 305
>PRK05939 hypothetical protein; Provisional
Probab=22.85 E-value=6.9e+02 Score=24.01 Aligned_cols=57 Identities=9% Similarity=-0.037 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
+++|+.|.+.-..-......+-++.+.|+.++.++.. ..+.+...+. -+.++|+++.
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~ves 139 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFVET 139 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEEEC
Confidence 6788887664332122222223455678877777653 5667777764 3567777754
No 306
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=22.58 E-value=2.3e+02 Score=23.67 Aligned_cols=44 Identities=7% Similarity=0.145 Sum_probs=28.8
Q ss_pred eEEeHHHHHHHHHHHHHHHHhC--CCCCCCeEEEEccCCHHHHHHHHH
Q psy2417 113 QWIHYNQALLRARNFGSGLLGL--GVNPGSFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~~s~e~i~~~lA 158 (391)
.-+|+.|+.+++.++|..+.+. |.. ..+.+...++-......++
T Consensus 5 ~l~s~~~i~~~i~~la~~i~~~~~~~~--~~viv~il~gG~~~a~~La 50 (176)
T PRK05205 5 EILDAEALRRALTRIAHEIIERNKGLD--NLVLVGIKTRGVWLAERLA 50 (176)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCCC--CeEEEEEccCCHHHHHHHH
Confidence 4589999999999999999874 332 2344444444333333343
No 307
>PRK07476 eutB threonine dehydratase; Provisional
Probab=22.53 E-value=5e+02 Score=24.05 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=39.0
Q ss_pred EEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 144 IYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 144 i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+....+-.-...-+++.+.|...+.+-|...++.....++..++++++++..
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445556666677788889987776666666677778889999999999864
No 308
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=22.20 E-value=7.8e+02 Score=24.40 Aligned_cols=96 Identities=10% Similarity=0.016 Sum_probs=65.3
Q ss_pred cCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHH---HHHHHHHhcCCeEEEc
Q psy2417 96 SNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWI---ITEQGAYCYSMIIVAL 169 (391)
Q Consensus 96 ~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i---~~~lA~~~~G~~~vpl 169 (391)
.++.+|+..... .+.+ ...+|.+.+...+..... ..++.+++++...+|-...+- ...++++..|+..+..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 356666654432 2222 467899988876665443 356888998888777554332 2467888889887754
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 170 YDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 170 ~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
+...+......+++.++.++.....
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~ 281 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPP 281 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChH
Confidence 4456777888899999988888664
No 309
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=22.17 E-value=4.2e+02 Score=25.29 Aligned_cols=58 Identities=9% Similarity=0.005 Sum_probs=28.6
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
+++|+.|.+..+.-......+-.+...+.+-+........+.+...++. +.++|+++.
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~ 144 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIET 144 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEEC
Confidence 4677776554443332232222333444444444334456666666643 456666543
No 310
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=22.12 E-value=2.6e+02 Score=23.37 Aligned_cols=59 Identities=15% Similarity=0.018 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeE
Q psy2417 84 TLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFV 142 (391)
Q Consensus 84 tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V 142 (391)
.+.+.+....+.+|+....+...........+.+.==.+|++.+..+|...|+.+....
T Consensus 86 ~~L~~~a~~L~~~p~~~v~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gv~~~ri~ 144 (173)
T PRK10802 86 QMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQIS 144 (173)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHeE
Confidence 34555666777788765444433212223445666667899999999999999876533
No 311
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.12 E-value=5.9e+02 Score=23.13 Aligned_cols=81 Identities=5% Similarity=-0.073 Sum_probs=47.5
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHH---HHHHHHhcCccEEEE
Q psy2417 116 HYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDA---CAFIINQAEISVLIV 192 (391)
Q Consensus 116 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~---l~~il~~~~~~~vi~ 192 (391)
.++++.++.+.+-..+.+.--....+..+...+...|+.-.+++-..+..-+--....++.+ +...+++.++++||+
T Consensus 155 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 234 (286)
T cd01019 155 NLEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFA 234 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 46666777776666666531122355666677788888766655433311111122344554 455556788999999
Q ss_pred cCCc
Q psy2417 193 DDDS 196 (391)
Q Consensus 193 ~~~~ 196 (391)
+...
T Consensus 235 e~~~ 238 (286)
T cd01019 235 EPQF 238 (286)
T ss_pred cCCC
Confidence 8863
No 312
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=22.09 E-value=59 Score=25.17 Aligned_cols=24 Identities=38% Similarity=0.559 Sum_probs=20.1
Q ss_pred EEEecCCCC-CCCcEEEeehhHHHH
Q psy2417 260 TICYTSGTT-GNPKGVMLTHGNVIA 283 (391)
Q Consensus 260 ~i~~TSGST-G~PKgV~~th~~l~~ 283 (391)
-.-||||.+ ..|.|+|..|..++.
T Consensus 80 ~y~YtSg~~l~Tp~G~M~GhY~M~~ 104 (126)
T COG2967 80 EYQYTSGCPLDTPSGTMQGHYEMID 104 (126)
T ss_pred ceEEcCCcCccCCcceEEEEEEEec
Confidence 457999988 899999999987754
No 313
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=21.91 E-value=7.8e+02 Score=24.34 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=33.5
Q ss_pred hCCCCCCCeEEEEccCCHHHHHHHHH-HHhcCCeEEEc--------------cCCCCHHHHHHHHHhcC
Q psy2417 133 GLGVNPGSFVGIYSQNCPEWIITEQG-AYCYSMIIVAL--------------YDTLGPDACAFIINQAE 186 (391)
Q Consensus 133 ~~gv~~g~~V~i~~~~s~e~i~~~lA-~~~~G~~~vpl--------------~~~~~~~~l~~il~~~~ 186 (391)
..++++|+.| .+..++.+.-| +...|++++=+ ......+.++..+....
T Consensus 111 ~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 111 RIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 3578999965 44445555555 88888877633 44578889999987543
No 314
>PF07538 ChW: Clostridial hydrophobic W; InterPro: IPR006637 This hydrophobic repeat is found in a number of Chlostridium proteins. It contains a conserved tryptophan residue.
Probab=21.86 E-value=62 Score=19.16 Aligned_cols=12 Identities=42% Similarity=0.490 Sum_probs=9.4
Q ss_pred cCCCCCCCcEEE
Q psy2417 264 TSGTTGNPKGVM 275 (391)
Q Consensus 264 TSGSTG~PKgV~ 275 (391)
++||+|..|.+.
T Consensus 16 ~aGt~G~~~rlE 27 (36)
T PF07538_consen 16 TAGTTGQGLRLE 27 (36)
T ss_pred ecccCCCCcEEE
Confidence 689999988653
No 315
>PRK06381 threonine synthase; Validated
Probab=21.82 E-value=3.1e+02 Score=25.36 Aligned_cols=67 Identities=12% Similarity=-0.008 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 125 RNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 125 ~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
..+...+.+.|. +.| +.+..+-.-+..-++|...|.....+-|...+......++..++++++++..
T Consensus 52 ~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 52 EAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred HHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 333334455553 344 4455666677777788889987666655555556667899999999999874
No 316
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=21.75 E-value=7.4e+02 Score=23.98 Aligned_cols=60 Identities=8% Similarity=0.091 Sum_probs=33.2
Q ss_pred CCCCCeEEEEccCCHHH-----HHHH----HHHHhcCCeEEEcc---CCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 136 VNPGSFVGIYSQNCPEW-----IITE----QGAYCYSMIIVALY---DTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~-----i~~~----lA~~~~G~~~vpl~---~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
++|||+|..+....=.. .... ........+..+++ -...-+++..+++..+|++|++...
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S 178 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGAS 178 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-S
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECch
Confidence 47888887766543211 1111 12233445556777 3557789999999999999999887
No 317
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=21.72 E-value=6.1e+02 Score=23.01 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=59.5
Q ss_pred HHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeE
Q psy2417 87 DAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMII 166 (391)
Q Consensus 87 ~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~ 166 (391)
.+++...+.-|+.-.+...|..+-+|...|=.++.+++.++...|.+++++ +.+.+-|+.-.++.-.-=.+....+
T Consensus 19 sVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ik----~lVIACNTASa~al~~LR~~~~iPV 94 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERGIK----ALVIACNTASAVALEDLREKFDIPV 94 (269)
T ss_pred HHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC----EEEEecchHHHHHHHHHHHhCCCCE
Confidence 456667778899998888886666788899999999999999999999855 5666667765554444444445545
Q ss_pred EEccCC
Q psy2417 167 VALYDT 172 (391)
Q Consensus 167 vpl~~~ 172 (391)
+-+-|.
T Consensus 95 vGviPa 100 (269)
T COG0796 95 VGVIPA 100 (269)
T ss_pred EEeccc
Confidence 544443
No 318
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=21.43 E-value=6.8e+02 Score=24.79 Aligned_cols=67 Identities=13% Similarity=0.148 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHh-----cCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHHHHHH
Q psy2417 83 KTLYDAFRKGAKE-----SNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPEWIIT 155 (391)
Q Consensus 83 ~tl~~~l~~~~~~-----~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e~i~~ 155 (391)
..+.+.+++.... .-+..|+...+. ...+|+++.+.++.++.++.+. +.++..+.|.+++..-=+..
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~g~-----~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvLG 424 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALPGK-----PNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVLG 424 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeCCC-----CCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHHH
Confidence 4666777766555 233456666664 6799999999999999999976 56677777777776554443
No 319
>PRK00865 glutamate racemase; Provisional
Probab=21.40 E-value=5.9e+02 Score=22.75 Aligned_cols=61 Identities=15% Similarity=0.066 Sum_probs=47.4
Q ss_pred HHHHHHHHhcCCCceEEEeecCCCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEccCCHH
Q psy2417 87 DAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQALLRARNFGSGLLGLGVNPGSFVGIYSQNCPE 151 (391)
Q Consensus 87 ~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~~s~e 151 (391)
.++++..+..|+...+.+.|...-+|...|-.|+.+++.+++..|.+.|+. .|. +.-|+..
T Consensus 19 tvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d---~iV-IaCNTa~ 79 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLEYGVK---MLV-IACNTAS 79 (261)
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCC---EEE-EeCchHH
Confidence 456666777899988888887667888999999999999999999987653 344 4445544
No 320
>PRK08175 aminotransferase; Validated
Probab=21.36 E-value=7.1e+02 Score=23.62 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=16.0
Q ss_pred CCCCCcEEEeehhHHHHHHHHHHH
Q psy2417 267 TTGNPKGVMLTHGNVIAAISAALL 290 (391)
Q Consensus 267 STG~PKgV~~th~~l~~~~~~~~~ 290 (391)
..|.--|.++.+..++..+.....
T Consensus 241 ~pGlRiG~~~~~~~l~~~~~~~~~ 264 (395)
T PRK08175 241 MAGWRIGFMVGNPELVSALARIKS 264 (395)
T ss_pred CcchhheeeeCCHHHHHHHHHHHh
Confidence 344446889988888887665443
No 321
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=21.32 E-value=8e+02 Score=24.24 Aligned_cols=94 Identities=7% Similarity=0.010 Sum_probs=60.7
Q ss_pred cCCCceEEEeec--CCCC-ceEEeHHHHHHHHHHHHHHHHhCCCC-CCCeEEEEccCCHH-HHHHHHHHHhcCCeEEEcc
Q psy2417 96 SNNGRCLGWRQN--ISRP-YQWIHYNQALLRARNFGSGLLGLGVN-PGSFVGIYSQNCPE-WIITEQGAYCYSMIIVALY 170 (391)
Q Consensus 96 ~pd~~al~~~~~--~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~-~g~~V~i~~~~s~e-~i~~~lA~~~~G~~~vpl~ 170 (391)
.++.+|++.... .+.+ ...+|++.+...+..+... .++. +++++..++|-... .+..+++.+..|+..+...
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 456677665432 2222 4668998888776665544 4566 78888887774432 2234567788888877654
Q ss_pred C-CC--CHHHHHHHHHhcCccEEEE
Q psy2417 171 D-TL--GPDACAFIINQAEISVLIV 192 (391)
Q Consensus 171 ~-~~--~~~~l~~il~~~~~~~vi~ 192 (391)
. .+ .+..+..++++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 22 4667888889999886644
No 322
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.31 E-value=2.3e+02 Score=23.87 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=30.8
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCC-CeEEEEccCCHHHHHHHHH
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVNPG-SFVGIYSQNCPEWIITEQG 158 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~~g-~~V~i~~~~s~e~i~~~lA 158 (391)
.-+|.+|+.+++.++|..+.+.--..+ +.|.++.-++-.+.++.|+
T Consensus 7 ~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~ 53 (178)
T PRK15423 7 VMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLC 53 (178)
T ss_pred EecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHH
Confidence 358999999999999999987532212 3455555555554444443
No 323
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=21.25 E-value=2.2e+02 Score=26.78 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=44.2
Q ss_pred HHHhCCCCCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcC
Q psy2417 130 GLLGLGVNPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDD 194 (391)
Q Consensus 130 ~L~~~gv~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 194 (391)
.|+..+++||++|+|..--+.-.+...+|-.+- +-++.++.+-...+ ..++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~K~e---~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKLE---LAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChHHHH---HHHHhCCcEEEEcC
Confidence 455678999999999999888888888877554 77777776544333 34456777777754
No 324
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=21.10 E-value=6.2e+02 Score=22.89 Aligned_cols=65 Identities=9% Similarity=0.031 Sum_probs=45.7
Q ss_pred HHHhCCC-CCCCeEEEEccCCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccEEEEcCC
Q psy2417 130 GLLGLGV-NPGSFVGIYSQNCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISVLIVDDD 195 (391)
Q Consensus 130 ~L~~~gv-~~g~~V~i~~~~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 195 (391)
.+.+.|. .+|+.|. ....+-.-....++|.+.|...+.+-|...+......++..++++++++..
T Consensus 43 ~a~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 43 DAEKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred HHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3444553 3456554 456666666777788889987776666665566778889999999999875
No 325
>KOG1179|consensus
Probab=20.91 E-value=4.5e+02 Score=26.76 Aligned_cols=75 Identities=12% Similarity=0.014 Sum_probs=56.1
Q ss_pred eEEeHHHHHHHHHHHHH-HHHhCCCCCCCeEEEEcc--CCHHHHHHHHHHHhcCCeEEEccCCCCHHHHHHHHHhcCccE
Q psy2417 113 QWIHYNQALLRARNFGS-GLLGLGVNPGSFVGIYSQ--NCPEWIITEQGAYCYSMIIVALYDTLGPDACAFIINQAEISV 189 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~-~L~~~gv~~g~~V~i~~~--~s~e~i~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 189 (391)
..+|..... +.+. .....|+.+.|+|-+.+| -+.-.++.+.+|+..|++.| |-..++....-.-+.+.++.+
T Consensus 260 Avith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv 334 (649)
T KOG1179|consen 260 AVITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTV 334 (649)
T ss_pred HHHHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCee
Confidence 445655444 4444 333468999999999998 77888999999999998755 788899888777777777766
Q ss_pred EEE
Q psy2417 190 LIV 192 (391)
Q Consensus 190 vi~ 192 (391)
+-.
T Consensus 335 ~QY 337 (649)
T KOG1179|consen 335 IQY 337 (649)
T ss_pred eeh
Confidence 644
No 326
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=20.69 E-value=6.2e+02 Score=24.32 Aligned_cols=141 Identities=14% Similarity=0.137 Sum_probs=77.8
Q ss_pred EEEccCCHHHH-HHHHHHHhcCCeEEEccCCCCHH--HHHHHHHhcCccEEEEcCCcchhHHHhhcccCccEEEEecCcc
Q psy2417 143 GIYSQNCPEWI-ITEQGAYCYSMIIVALYDTLGPD--ACAFIINQAEISVLIVDDDSKCNQIIDRAPRCLKKIISIREVR 219 (391)
Q Consensus 143 ~i~~~~s~e~i-~~~lA~~~~G~~~vpl~~~~~~~--~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~l~~ii~~~~~~ 219 (391)
+++.+.+.--+ .+++++++.|-.++..+.-|..- -+...+...+.++.+++... .+.+.+..... ..+|+++.+.
T Consensus 73 a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d-~~~l~~~l~~~-t~~v~~Esps 150 (386)
T PF01053_consen 73 ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTD-LEALEAALRPN-TKLVFLESPS 150 (386)
T ss_dssp EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTS-HHHHHHHHCTT-EEEEEEESSB
T ss_pred eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchh-HHHHHhhcccc-ceEEEEEcCC
Confidence 34456666665 77889999998888877777554 36677888999999998853 56665555532 3455666543
Q ss_pred hHHHHHHhhCCceEEeHHHHHHhhhccC-C---------CCCCCCCCCc-eEEEecCCC------CCCCcEEEeehh--H
Q psy2417 220 MATMQRARSRAIEIIRFDEIERVGAQKM-F---------EEVPPKPTDL-CTICYTSGT------TGNPKGVMLTHG--N 280 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~---------~~~~~~~~~~-a~i~~TSGS------TG~PKgV~~th~--~ 280 (391)
. ...++.++..+.+...... . .+....|-+. |=|...|.| ...-=|+++... .
T Consensus 151 N--------P~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~ 222 (386)
T PF01053_consen 151 N--------PTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSE 222 (386)
T ss_dssp T--------TTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHH
T ss_pred C--------cccccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhh
Confidence 2 1345566666655444332 1 1111122111 334444444 333358888543 6
Q ss_pred HHHHHHHHHHhhc
Q psy2417 281 VIAAISAALLQLS 293 (391)
Q Consensus 281 l~~~~~~~~~~~~ 293 (391)
+...+......++
T Consensus 223 ~~~~l~~~~~~~G 235 (386)
T PF01053_consen 223 LYDRLREFRRLLG 235 (386)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhhhhcchhhhcC
Confidence 6666665555554
No 327
>KOG2631|consensus
Probab=20.46 E-value=2.1e+02 Score=24.69 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHhcCCCceEEEeecCCCCceEEeHHH----------HHHHHHHHHHHHHhCCCCCC
Q psy2417 83 KTLYDAFRKGAKESNNGRCLGWRQNISRPYQWIHYNQ----------ALLRARNFGSGLLGLGVNPG 139 (391)
Q Consensus 83 ~tl~~~l~~~~~~~pd~~al~~~~~~~~~~~~~Ty~e----------l~~~~~~la~~L~~~gv~~g 139 (391)
..|.|-+....+.||+..|+..++. ..+-|++ -.+.--.+|-.+.++|+.|.
T Consensus 167 ~~L~D~l~~aie~YP~tcAVLVR~H-----GvyvWG~TWekaKt~~EcydYLfelaikm~klgipp~ 228 (238)
T KOG2631|consen 167 SDLKDSLKKAIELYPDTCAVLVRRH-----GVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIPPE 228 (238)
T ss_pred HHHHHHHHHHHHhCCcceEEEEecC-----cEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Confidence 3577889999999999999998875 3444444 44444456667777787763
No 328
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=20.46 E-value=7.3e+02 Score=23.46 Aligned_cols=130 Identities=19% Similarity=0.238 Sum_probs=68.1
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHhcCCe--EEEccC-CCCHHHHHHHHHhcCccEEEEcCC----------cchhHHH
Q psy2417 136 VNPGSFVGIYSQNCPEWIITEQGAYCYSMI--IVALYD-TLGPDACAFIINQAEISVLIVDDD----------SKCNQII 202 (391)
Q Consensus 136 v~~g~~V~i~~~~s~e~i~~~lA~~~~G~~--~vpl~~-~~~~~~l~~il~~~~~~~vi~~~~----------~~~~~~~ 202 (391)
..+|+.|.+..|.=.++- ..+...|+. .||+.+ ....+.+...+.+ ++++|+.... ..+..++
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~---~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~ 171 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYE---IAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALL 171 (356)
T ss_pred hcCCCEEEEcCCChHHHH---HHHHhcCCeEEEecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 466788888777544444 345556654 445543 3455666666666 6777766533 1233444
Q ss_pred hhcccCccEEEEecCcchHHHHHHhhCCceEEeHHHHHHhhhccCCCCCCCCCCCceEEEecC----CCCCCCcEEEeeh
Q psy2417 203 DRAPRCLKKIISIREVRMATMQRARSRAIEIIRFDEIERVGAQKMFEEVPPKPTDLCTICYTS----GTTGNPKGVMLTH 278 (391)
Q Consensus 203 ~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~i~~TS----GSTG~PKgV~~th 278 (391)
+.++ . ..++++|+ .|-|+.. ........ .+++ ..|+-|= |=-|.--|-.+.|
T Consensus 172 ~~~~-~-~~~vVvDE-----------------AY~eF~~---~~~~~l~~-~~~n-livlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 172 EALP-E-GGLVVIDE-----------------AYIEFSP---ESSLELLK-YPPN-LIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred HhCC-C-CcEEEEeC-----------------chhhcCC---chhhhhcc-CCCC-EEEEEecHHhhhcchhceeeccCC
Confidence 4444 2 55667765 1222221 00001111 2222 3344442 2335556888999
Q ss_pred hHHHHHHHHHHHhhc
Q psy2417 279 GNVIAAISAALLQLS 293 (391)
Q Consensus 279 ~~l~~~~~~~~~~~~ 293 (391)
..++..+.....-|+
T Consensus 228 ~~~i~~l~~vr~p~~ 242 (356)
T COG0079 228 PELIAALNKVRPPFN 242 (356)
T ss_pred HHHHHHHHHhcCCCC
Confidence 999888776655443
No 329
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=20.38 E-value=2.3e+02 Score=24.64 Aligned_cols=48 Identities=2% Similarity=-0.071 Sum_probs=33.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCC----CC-CeEEEEccCCHHHHHHHHHHH
Q psy2417 113 QWIHYNQALLRARNFGSGLLGLGVN----PG-SFVGIYSQNCPEWIITEQGAY 160 (391)
Q Consensus 113 ~~~Ty~el~~~~~~la~~L~~~gv~----~g-~~V~i~~~~s~e~i~~~lA~~ 160 (391)
.-+|+.|+.+++.++|..+.+..-+ .+ ..|.|+.-++--...+.|+=.
T Consensus 26 ~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~ 78 (211)
T PTZ00271 26 TLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARF 78 (211)
T ss_pred EecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHH
Confidence 4689999999999999999875321 12 356666666665555555433
No 330
>PRK06145 acyl-CoA synthetase; Validated
Probab=20.38 E-value=6.5e+02 Score=24.49 Aligned_cols=81 Identities=9% Similarity=-0.029 Sum_probs=57.7
Q ss_pred EeehhHHHHHHHHHHHhhcCCCCCCCCEEEEcCChHHHHHHHHHHHHHHhCcEEEEeCC--CHHhHHHHHHhcCCcEEec
Q psy2417 275 MLTHGNVIAAISAALLQLSDHRPKYSDVLISFLPLAHMLERTCESAMFLVGGSIGYYSG--DIKNLTEDMKTLKPTIMPA 352 (391)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~L~~G~~vv~~~~--~~~~l~~~i~~~~~t~~~~ 352 (391)
.+|...+...+......+....+.+++++...++-+-.+ +...++++..|+..+..+. ....+...+++.++..+..
T Consensus 27 ~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 105 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAF-LELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLV 105 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEE
Confidence 588898888777666655322377889988887755432 2234788888888877654 6778888889999988876
Q ss_pred ChHH
Q psy2417 353 VPRL 356 (391)
Q Consensus 353 ~P~~ 356 (391)
.+..
T Consensus 106 ~~~~ 109 (497)
T PRK06145 106 DEEF 109 (497)
T ss_pred ccch
Confidence 6544
Done!