Query psy2420
Match_columns 174
No_of_seqs 120 out of 1065
Neff 8.6
Searched_HMMs 46136
Date Sat Aug 17 00:31:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2420.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2420hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02614 long-chain acyl-CoA s 100.0 4.6E-38 1E-42 276.3 17.8 166 2-168 495-660 (666)
2 PLN02430 long-chain-fatty-acid 100.0 1.6E-36 3.5E-41 266.2 18.4 167 2-169 492-658 (660)
3 PLN02387 long-chain-fatty-acid 100.0 2.4E-36 5.3E-41 266.5 19.1 161 3-164 535-696 (696)
4 PLN02861 long-chain-fatty-acid 100.0 7E-36 1.5E-40 262.2 18.5 166 2-168 492-657 (660)
5 KOG1256|consensus 100.0 3.3E-36 7.1E-41 258.2 15.2 165 2-167 526-690 (691)
6 PLN02736 long-chain acyl-CoA s 100.0 4E-35 8.7E-40 256.8 18.4 164 2-166 486-650 (651)
7 KOG1180|consensus 100.0 1.9E-35 4.2E-40 246.2 14.2 162 3-165 515-677 (678)
8 PTZ00216 acyl-CoA synthetase; 100.0 3.9E-34 8.4E-39 252.6 18.8 163 2-165 535-699 (700)
9 PTZ00342 acyl-CoA synthetase; 100.0 4E-34 8.8E-39 253.6 18.5 162 2-165 569-745 (746)
10 PTZ00297 pantothenate kinase; 100.0 9.8E-30 2.1E-34 235.7 16.7 162 4-168 836-1006(1452)
11 COG1022 FAA1 Long-chain acyl-C 100.0 1.1E-29 2.3E-34 219.1 14.9 161 2-166 448-610 (613)
12 PRK12582 acyl-CoA synthetase; 100.0 9.1E-28 2E-32 209.5 17.6 161 2-168 451-618 (624)
13 PRK08180 feruloyl-CoA synthase 100.0 4.4E-27 9.6E-32 204.8 17.3 163 2-168 439-607 (614)
14 KOG1176|consensus 99.9 3.3E-27 7.2E-32 201.7 10.1 123 3-158 408-533 (537)
15 COG0365 Acs Acyl-coenzyme A sy 99.9 1.4E-22 3E-27 172.9 12.1 123 4-157 397-522 (528)
16 COG0318 CaiC Acyl-CoA syntheta 99.9 1.5E-22 3.2E-27 174.2 11.7 124 3-157 401-527 (534)
17 PRK07445 O-succinylbenzoic aci 99.9 1.9E-22 4E-27 170.3 11.8 125 2-160 323-450 (452)
18 KOG1177|consensus 99.9 1.7E-22 3.8E-27 166.8 10.8 127 2-159 460-589 (596)
19 PTZ00237 acetyl-CoA synthetase 99.9 4.1E-22 8.8E-27 174.9 12.6 130 2-157 491-623 (647)
20 PLN03051 acyl-activating enzym 99.9 5.1E-22 1.1E-26 169.1 12.6 129 3-159 357-493 (499)
21 TIGR01217 ac_ac_CoA_syn acetoa 99.9 3.5E-22 7.7E-27 175.4 11.2 125 2-156 498-625 (652)
22 PLN02860 o-succinylbenzoate-Co 99.9 8.4E-22 1.8E-26 170.0 12.9 144 2-162 413-559 (563)
23 PLN02654 acetate-CoA ligase 99.9 7.2E-22 1.6E-26 173.9 11.1 125 2-156 512-639 (666)
24 PRK03584 acetoacetyl-CoA synth 99.9 1.2E-21 2.5E-26 171.9 11.2 126 2-157 497-625 (655)
25 KOG1175|consensus 99.9 1.8E-21 3.8E-26 167.5 10.3 126 3-158 475-603 (626)
26 TIGR02188 Ac_CoA_lig_AcsA acet 99.9 4.1E-21 9E-26 167.5 11.2 125 2-156 474-601 (625)
27 TIGR02316 propion_prpE propion 99.9 6E-21 1.3E-25 166.8 12.1 129 3-156 472-603 (628)
28 PRK00174 acetyl-CoA synthetase 99.8 9.4E-21 2E-25 165.7 11.1 125 2-156 482-609 (637)
29 PRK10524 prpE propionyl-CoA sy 99.8 1.2E-20 2.7E-25 164.6 11.4 129 3-156 473-604 (629)
30 PRK07824 O-succinylbenzoic aci 99.8 1.6E-20 3.5E-25 153.4 11.3 121 3-157 234-357 (358)
31 PRK07868 acyl-CoA synthetase; 99.8 1.2E-20 2.5E-25 172.6 10.6 119 2-154 835-955 (994)
32 PRK09188 serine/threonine prot 99.8 1.4E-20 3.1E-25 154.7 9.8 114 2-157 208-328 (365)
33 PRK07788 acyl-CoA synthetase; 99.8 1.6E-20 3.5E-25 161.3 9.8 119 2-153 426-547 (549)
34 PLN03102 acyl-activating enzym 99.8 4.8E-20 1E-24 159.7 12.6 134 3-159 420-556 (579)
35 PLN03052 acetate--CoA ligase; 99.8 4.7E-20 1E-24 163.9 12.1 127 4-159 590-723 (728)
36 PRK06334 long chain fatty acid 99.8 4.4E-20 9.5E-25 158.8 11.6 119 3-157 410-535 (539)
37 PRK07529 AMP-binding domain pr 99.8 4.5E-20 9.8E-25 161.5 11.7 125 2-159 444-572 (632)
38 PRK05857 acyl-CoA synthetase; 99.8 7.4E-20 1.6E-24 157.2 12.8 128 2-157 401-531 (540)
39 PRK08279 long-chain-acyl-CoA s 99.8 2.8E-20 6E-25 161.5 9.4 123 3-158 439-565 (600)
40 PRK04319 acetyl-CoA synthetase 99.8 4.7E-20 1E-24 159.2 10.4 123 3-155 432-557 (570)
41 TIGR03443 alpha_am_amid L-amin 99.8 3.7E-20 8E-25 173.8 10.3 151 3-162 678-833 (1389)
42 PRK09029 O-succinylbenzoic aci 99.8 1.3E-19 2.7E-24 152.5 12.0 120 2-157 331-453 (458)
43 PLN02574 4-coumarate--CoA liga 99.8 6.6E-20 1.4E-24 158.1 10.4 123 2-157 429-554 (560)
44 PRK05852 acyl-CoA synthetase; 99.8 5.5E-20 1.2E-24 157.5 9.7 122 3-157 408-532 (534)
45 PRK06060 acyl-CoA synthetase; 99.8 7.8E-20 1.7E-24 161.7 10.9 124 3-156 365-491 (705)
46 PRK07638 acyl-CoA synthetase; 99.8 1.8E-19 3.8E-24 152.5 11.6 119 2-157 360-481 (487)
47 PRK05620 long-chain-fatty-acid 99.8 7.4E-20 1.6E-24 158.2 9.2 138 3-170 430-570 (576)
48 PRK08316 acyl-CoA synthetase; 99.8 1.5E-19 3.3E-24 153.5 10.4 126 2-160 394-522 (523)
49 PRK08043 bifunctional acyl-[ac 99.8 3.9E-19 8.4E-24 157.7 12.5 120 2-156 590-712 (718)
50 PRK07867 acyl-CoA synthetase; 99.8 3.2E-19 6.9E-24 153.1 11.6 124 3-157 381-507 (529)
51 PRK09088 acyl-CoA synthetase; 99.8 4E-19 8.6E-24 150.3 11.6 123 2-157 360-485 (488)
52 PRK07008 long-chain-fatty-acid 99.8 3.9E-19 8.5E-24 152.6 11.6 124 2-158 408-534 (539)
53 PRK05677 long-chain-fatty-acid 99.8 3.5E-19 7.6E-24 153.6 11.2 123 2-157 432-557 (562)
54 TIGR02275 DHB_AMP_lig 2,3-dihy 99.8 2.6E-19 5.7E-24 153.0 10.3 116 3-151 408-526 (527)
55 TIGR01734 D-ala-DACP-lig D-ala 99.8 3.3E-19 7.1E-24 151.0 10.8 124 3-156 374-501 (502)
56 PRK06839 acyl-CoA synthetase; 99.8 3.7E-19 8.1E-24 150.4 10.6 120 3-155 371-493 (496)
57 PRK06155 crotonobetaine/carnit 99.8 3.7E-19 8E-24 153.0 10.7 120 3-155 400-522 (542)
58 PRK09274 peptide synthase; Pro 99.8 7.2E-19 1.6E-23 151.0 12.3 126 4-159 421-550 (552)
59 PRK13295 cyclohexanecarboxylat 99.8 4.8E-19 1E-23 152.2 11.1 123 3-157 419-544 (547)
60 PRK08314 long-chain-fatty-acid 99.8 3.2E-19 6.9E-24 152.8 9.8 122 3-155 416-540 (546)
61 PRK07514 malonyl-CoA synthase; 99.8 5.3E-19 1.1E-23 149.8 11.0 124 3-159 377-503 (504)
62 PRK07470 acyl-CoA synthetase; 99.8 5.3E-19 1.1E-23 151.0 10.8 123 2-157 393-518 (528)
63 PRK13390 acyl-CoA synthetase; 99.8 3.8E-19 8.2E-24 151.0 9.7 120 3-152 379-501 (501)
64 PRK13382 acyl-CoA synthetase; 99.8 3.9E-19 8.5E-24 152.6 9.8 119 2-153 415-536 (537)
65 PLN02246 4-coumarate--CoA liga 99.8 6.6E-19 1.4E-23 150.9 11.2 122 2-156 411-535 (537)
66 COG1021 EntE Peptide arylation 99.8 1.6E-19 3.4E-24 146.8 6.8 123 2-157 413-538 (542)
67 PRK12583 acyl-CoA synthetase; 99.8 5.3E-19 1.1E-23 151.7 10.5 124 3-159 428-554 (558)
68 PRK10946 entE enterobactin syn 99.8 1.2E-18 2.6E-23 149.5 12.2 122 3-158 409-533 (536)
69 PRK05605 long-chain-fatty-acid 99.8 7.7E-19 1.7E-23 151.6 11.1 124 3-159 445-571 (573)
70 PRK13388 acyl-CoA synthetase; 99.8 1.2E-18 2.6E-23 149.8 11.5 122 3-155 380-504 (540)
71 PRK06145 acyl-CoA synthetase; 99.8 8.7E-19 1.9E-23 148.4 10.3 120 3-155 373-495 (497)
72 PRK06178 acyl-CoA synthetase; 99.8 1.2E-18 2.7E-23 150.1 11.0 122 2-157 441-565 (567)
73 PRK05851 long-chain-fatty-acid 99.8 4E-19 8.8E-24 152.1 7.9 123 2-157 395-522 (525)
74 PRK08276 long-chain-fatty-acid 99.8 3.5E-18 7.5E-23 145.0 13.4 127 3-159 369-498 (502)
75 PRK07769 long-chain-fatty-acid 99.8 5.4E-19 1.2E-23 154.5 8.6 123 3-157 464-614 (631)
76 TIGR03208 cyc_hxne_CoA_lg cycl 99.8 8.6E-19 1.9E-23 150.2 9.6 118 3-152 417-537 (538)
77 PLN02330 4-coumarate--CoA liga 99.8 1.2E-18 2.5E-23 149.7 10.5 124 2-158 416-542 (546)
78 PRK04813 D-alanine--poly(phosp 99.8 1.7E-18 3.7E-23 146.4 11.3 124 3-156 376-502 (503)
79 PRK13391 acyl-CoA synthetase; 99.8 3.1E-18 6.7E-23 145.9 12.4 124 3-156 382-508 (511)
80 PRK06188 acyl-CoA synthetase; 99.8 1.8E-18 4E-23 147.5 10.9 122 3-157 393-517 (524)
81 PRK07787 acyl-CoA synthetase; 99.8 2E-18 4.3E-23 145.8 10.5 116 3-153 350-469 (471)
82 PRK06018 putative acyl-CoA syn 99.8 2E-18 4.3E-23 148.2 10.7 122 3-157 410-534 (542)
83 PRK06814 acylglycerophosphoeth 99.8 3.3E-18 7.1E-23 158.1 12.8 123 2-159 1009-1134(1140)
84 PRK06164 acyl-CoA synthetase; 99.8 2.7E-18 5.8E-23 147.1 11.4 124 3-159 406-534 (540)
85 PRK03640 O-succinylbenzoic aci 99.8 3.2E-18 7E-23 144.3 11.7 120 3-157 360-482 (483)
86 PLN02479 acetate-CoA ligase 99.8 3.5E-18 7.7E-23 147.6 12.1 127 2-157 429-558 (567)
87 PRK08008 caiC putative crotono 99.8 1.3E-18 2.8E-23 148.2 9.2 116 3-151 398-516 (517)
88 PRK08308 acyl-CoA synthetase; 99.8 2.5E-18 5.3E-23 143.1 10.6 115 2-151 290-407 (414)
89 PRK07786 long-chain-fatty-acid 99.8 2.5E-18 5.4E-23 147.6 11.0 125 3-159 399-526 (542)
90 PRK07798 acyl-CoA synthetase; 99.8 2.2E-18 4.8E-23 146.6 10.5 122 3-157 408-532 (533)
91 TIGR03098 ligase_PEP_1 acyl-Co 99.8 1.8E-18 3.8E-23 146.9 9.4 118 3-153 394-514 (515)
92 PRK06087 short chain acyl-CoA 99.8 5.2E-18 1.1E-22 145.6 11.7 129 2-161 409-540 (547)
93 PRK12492 long-chain-fatty-acid 99.8 4.2E-18 9E-23 146.9 10.9 117 3-153 441-560 (562)
94 PRK06710 long-chain-fatty-acid 99.8 3.8E-18 8.2E-23 147.0 10.6 122 3-157 431-555 (563)
95 PRK12406 long-chain-fatty-acid 99.8 5.5E-18 1.2E-22 144.1 11.4 122 3-157 379-503 (509)
96 PRK08315 AMP-binding domain pr 99.8 5.9E-18 1.3E-22 145.4 10.8 124 3-159 427-553 (559)
97 PRK08633 2-acyl-glycerophospho 99.8 8.5E-18 1.8E-22 154.9 12.6 121 3-158 1019-1144(1146)
98 PRK13383 acyl-CoA synthetase; 99.7 6.1E-18 1.3E-22 144.3 10.0 117 2-151 395-514 (516)
99 PRK08162 acyl-CoA synthetase; 99.7 9.5E-18 2.1E-22 143.8 11.1 122 3-158 416-540 (545)
100 PRK08751 putative long-chain f 99.7 6.4E-18 1.4E-22 145.4 10.0 118 3-154 437-557 (560)
101 TIGR02372 4_coum_CoA_lig 4-cou 99.7 1.1E-17 2.3E-22 139.1 10.9 112 3-147 275-386 (386)
102 PRK12316 peptide synthase; Pro 99.7 2.7E-18 5.9E-23 175.1 8.5 138 3-165 4929-5068(5163)
103 PRK12316 peptide synthase; Pro 99.7 4E-18 8.7E-23 173.9 9.1 121 3-157 886-1006(5163)
104 PRK12476 putative fatty-acid-- 99.7 9.5E-18 2.1E-22 146.2 10.3 124 3-157 476-606 (612)
105 PRK07656 long-chain-fatty-acid 99.7 1.1E-17 2.5E-22 141.7 10.1 119 2-153 391-512 (513)
106 PRK07059 Long-chain-fatty-acid 99.7 1.3E-17 2.9E-22 143.4 10.5 119 2-154 434-555 (557)
107 PRK08974 long-chain-fatty-acid 99.7 3.3E-17 7.2E-22 141.1 10.7 123 3-159 432-557 (560)
108 TIGR01923 menE O-succinylbenzo 99.7 2.6E-17 5.6E-22 137.1 9.5 115 2-151 319-436 (436)
109 TIGR03205 pimA dicarboxylate-- 99.7 2.9E-17 6.2E-22 140.9 9.9 117 3-151 421-540 (541)
110 PRK06187 long-chain-fatty-acid 99.7 5.8E-17 1.3E-21 137.4 11.4 122 3-157 395-519 (521)
111 PRK12467 peptide synthase; Pro 99.7 2.4E-17 5.3E-22 166.0 9.8 120 3-155 3471-3592(3956)
112 PRK09192 acyl-CoA synthetase; 99.7 6.2E-17 1.4E-21 140.1 11.0 125 3-158 439-567 (579)
113 PRK12467 peptide synthase; Pro 99.7 2.2E-17 4.8E-22 166.3 8.7 133 3-163 890-1024(3956)
114 PRK10252 entF enterobactin syn 99.7 3.8E-17 8.3E-22 152.4 9.4 118 3-153 837-963 (1296)
115 TIGR02262 benz_CoA_lig benzoat 99.7 5.4E-17 1.2E-21 138.1 9.0 121 3-153 384-507 (508)
116 PRK05850 acyl-CoA synthetase; 99.7 2E-16 4.2E-21 136.8 11.4 130 3-157 437-568 (578)
117 PRK05691 peptide synthase; Val 99.7 5.6E-17 1.2E-21 164.3 7.8 126 3-155 2568-2695(4334)
118 PRK05691 peptide synthase; Val 99.7 2.3E-16 4.9E-21 160.0 10.3 121 3-153 4102-4224(4334)
119 PRK07768 long-chain-fatty-acid 99.6 2.1E-15 4.6E-20 129.4 8.7 126 3-156 414-544 (545)
120 KOG1179|consensus 99.5 4.2E-14 9E-19 119.4 5.8 118 3-154 488-610 (649)
121 TIGR02155 PA_CoA_ligase phenyl 99.2 1.2E-10 2.5E-15 97.7 10.1 71 3-75 289-368 (422)
122 KOG1178|consensus 99.2 6.8E-11 1.5E-15 107.2 8.5 120 3-154 454-576 (1032)
123 PF13193 AMP-binding_C: AMP-bi 99.0 1E-09 2.2E-14 70.2 5.0 68 42-145 1-73 (73)
124 TIGR03335 F390_ftsA coenzyme F 97.4 0.0011 2.5E-08 56.2 9.7 48 5-54 300-359 (445)
125 KOG3628|consensus 97.3 0.0028 6.1E-08 58.4 11.2 128 2-163 1218-1358(1363)
126 COG1541 PaaK Coenzyme F390 syn 97.2 0.0025 5.4E-08 53.9 8.7 69 5-75 304-384 (438)
127 PF14535 AMP-binding_C_2: AMP- 96.6 0.012 2.5E-07 39.4 6.9 88 35-148 1-91 (96)
128 TIGR02304 aden_form_hyp probab 95.5 0.28 6.2E-06 41.7 11.2 68 5-74 297-378 (430)
129 TIGR01733 AA-adenyl-dom amino 91.5 0.21 4.7E-06 40.9 3.5 25 34-58 384-408 (408)
130 PF01037 AsnC_trans_reg: AsnC 74.2 17 0.00037 22.1 6.0 49 30-80 3-51 (74)
131 COG1504 Uncharacterized conser 74.2 9.9 0.00021 26.2 4.7 54 25-86 34-89 (121)
132 PF03321 GH3: GH3 auxin-respon 67.3 19 0.00042 31.5 6.4 54 6-61 372-434 (528)
133 PLN02249 indole-3-acetic acid- 64.8 90 0.002 28.0 10.0 42 6-49 411-456 (597)
134 PF08557 Lipid_DES: Sphingolip 62.5 5.9 0.00013 21.9 1.5 21 145-166 16-36 (39)
135 PRK10877 protein disulfide iso 56.0 21 0.00045 27.7 4.2 63 9-77 55-119 (232)
136 KOG2825|consensus 53.8 29 0.00062 27.9 4.5 26 141-166 271-296 (323)
137 PF09580 Spore_YhcN_YlaJ: Spor 52.4 29 0.00062 25.4 4.3 33 40-73 77-109 (177)
138 PF12503 CMV_1a_C: Cucumber mo 49.1 11 0.00024 24.4 1.4 44 4-47 3-50 (85)
139 PHA02885 putative interleukin 46.9 15 0.00032 25.0 1.7 30 15-48 58-87 (135)
140 PF01436 NHL: NHL repeat; Int 38.8 37 0.00079 16.8 2.1 19 13-31 8-26 (28)
141 PF08339 RTX_C: RTX C-terminal 32.2 18 0.0004 26.1 0.4 37 2-48 35-71 (145)
142 TIGR02898 spore_YhcN_YlaJ spor 31.1 2.1E+02 0.0046 20.9 7.6 31 41-72 57-87 (158)
143 cd05126 Mth938 Mth938 domain. 30.8 1.8E+02 0.0039 20.0 6.3 25 37-64 45-69 (117)
144 PRK11657 dsbG disulfide isomer 29.7 1.1E+02 0.0024 24.0 4.5 60 12-77 61-129 (251)
145 TIGR02804 ExbD_2 TonB system t 28.9 1.5E+02 0.0032 20.3 4.6 23 27-50 59-81 (121)
146 PRK13978 ribose-5-phosphate is 26.8 1.1E+02 0.0025 23.8 4.0 40 20-59 169-208 (228)
147 PF07193 DUF1408: Protein of u 26.1 49 0.0011 20.4 1.5 14 15-28 41-54 (75)
148 COG0075 Serine-pyruvate aminot 25.1 83 0.0018 26.6 3.2 37 23-59 102-138 (383)
149 cd05560 Xcc1710_like Xcc1710_l 25.0 2.2E+02 0.0049 19.2 6.2 43 37-88 39-81 (109)
150 PF06739 SBBP: Beta-propeller 24.8 61 0.0013 17.4 1.6 15 13-27 19-33 (38)
151 PF02457 DisA_N: DisA bacteria 24.1 1.5E+02 0.0033 20.6 3.9 56 16-72 12-73 (122)
152 PF08478 POTRA_1: POTRA domain 22.4 35 0.00075 20.5 0.4 25 37-61 33-57 (69)
153 KOG3866|consensus 21.9 3.4E+02 0.0073 22.5 5.9 57 99-169 227-284 (442)
154 PF08789 PBCV_basic_adap: PBCV 21.4 1.4E+02 0.0031 16.6 2.6 32 12-43 2-34 (40)
155 PRK11179 DNA-binding transcrip 20.7 3.2E+02 0.0069 19.4 5.2 37 41-78 84-120 (153)
156 PF05697 Trigger_N: Bacterial 20.6 2.5E+02 0.0055 19.6 4.6 41 98-159 22-62 (145)
157 PTZ00380 microtubule-associate 20.4 63 0.0014 22.6 1.3 15 13-27 93-107 (121)
No 1
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.6e-38 Score=276.25 Aligned_cols=166 Identities=37% Similarity=0.715 Sum_probs=158.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.+||+|||. |++|+||+|+|+||+||+||+++|+||+|.+||+.|.+||.|.+|+|+|++.+++++|+|+|+.+.+..|
T Consensus 495 dGw~~TGDl-g~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~ 573 (666)
T PLN02614 495 DGWLHTGDV-GEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFLVAIANPNQQILERW 573 (666)
T ss_pred cCCcccceE-EEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcceEEEEEeCCHHHHHHH
Confidence 479999998 9999999999999999999987899999999999999999999999999997789999999999999999
Q ss_pred HHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 82 ALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
+++.++..++.++++++++++.+.+++.+.+++.+|+.|++|++|.+++++|+++||++|||+|++|..|.++|+++|++
T Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 574 AAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred HHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHH
Confidence 99999887888999999999999999999976789999999999999999999999999999999999999999999999
Q ss_pred HhCCCCC
Q psy2420 162 LYNPPNP 168 (174)
Q Consensus 162 ly~~~~~ 168 (174)
||+..++
T Consensus 654 ly~~~~~ 660 (666)
T PLN02614 654 MYKTTNE 660 (666)
T ss_pred HHHhhhh
Confidence 9987654
No 2
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.6e-36 Score=266.23 Aligned_cols=167 Identities=35% Similarity=0.638 Sum_probs=158.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.+||+|||. |++|++|+|+|+||+||+||+++|++|+|.+||+.|.+||.|.+|+|+|++.+++++|+|+|+++.+..|
T Consensus 492 dGw~~TGDi-g~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~~~~~~~A~vv~~~~~~~~~ 570 (660)
T PLN02430 492 DGWFHTGDI-GEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDSFKSMLVAVVVPNEENTNKW 570 (660)
T ss_pred ccceeccce-EEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecCCcceEEEEEEcCHHHHHHH
Confidence 379999998 9999999999999999999998999999999999999999999999999876789999999999999999
Q ss_pred HHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 82 ALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
++..++..++.++++++++++.|.+++.+.+++.+|++|++|++|.+++++|++++|++|||+|++|+.|.++|+++|++
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 571 AKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred HHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 99988887888999999999999999999987788999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCC
Q psy2420 162 LYNPPNPT 169 (174)
Q Consensus 162 ly~~~~~~ 169 (174)
||++..++
T Consensus 651 ly~~~~~~ 658 (660)
T PLN02430 651 MYRKLAEK 658 (660)
T ss_pred HHHhhhhc
Confidence 99987664
No 3
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.4e-36 Score=266.50 Aligned_cols=161 Identities=32% Similarity=0.548 Sum_probs=154.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKA 82 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~ 82 (174)
+||+|||. |++|+||+|+|+||+||+||+++|+||+|.+||++|.+||.|.+|+|+|++.+++++|+|+|+++.+..|+
T Consensus 535 ~W~~TGDi-g~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~ 613 (696)
T PLN02387 535 RWFYTGDI-GQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFHSYCVALVVPSQQALEKWA 613 (696)
T ss_pred ceeecCce-EEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCcceEEEEEEeCHHHHHHHH
Confidence 49999998 99999999999999999999888999999999999999999999999999988899999999999999999
Q ss_pred HHcCCCC-ChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 83 LENGIPG-TLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
++.++.. ++.++++++++.+.+.+.+.+.+++.+|+.|++|++|.+++++|++++|++|||+|++|+.+.++|+++|++
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ 693 (696)
T PLN02387 614 KKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKREQIRKKFKDDLKK 693 (696)
T ss_pred HHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 9998874 788999999999999999999987789999999999999999999999999999999999999999999999
Q ss_pred HhC
Q psy2420 162 LYN 164 (174)
Q Consensus 162 ly~ 164 (174)
||.
T Consensus 694 ly~ 696 (696)
T PLN02387 694 LYE 696 (696)
T ss_pred HhC
Confidence 995
No 4
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7e-36 Score=262.17 Aligned_cols=166 Identities=37% Similarity=0.694 Sum_probs=156.1
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.+||+|||. |++|+||+|+|+||+||+||+++|+||+|.+||++|.+||.|.+|+|+|.+...+++|+|+|+.+.+..|
T Consensus 492 dGw~~TGDl-g~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~ 570 (660)
T PLN02861 492 DGWFHTGDI-GEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSFESFLVAVVVPDRQALEDW 570 (660)
T ss_pred ccCcccCce-EEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCCcceeEEEEEcCHHHHHHH
Confidence 379999998 9999999999999999999988999999999999999999999999999986678999999999999999
Q ss_pred HHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 82 ALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
+.++++..++.++++++.+...+.+++++.+++.+++.|++|++|.+++++|+++||++|+|+|++|+.+.++|+++|++
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 571 AANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred HHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 99887766788899999999999999999987788999999999999999999999999999999999999999999999
Q ss_pred HhCCCCC
Q psy2420 162 LYNPPNP 168 (174)
Q Consensus 162 ly~~~~~ 168 (174)
||++...
T Consensus 651 lY~~~~~ 657 (660)
T PLN02861 651 LYSEAKG 657 (660)
T ss_pred HHHhhhh
Confidence 9987543
No 5
>KOG1256|consensus
Probab=100.00 E-value=3.3e-36 Score=258.17 Aligned_cols=165 Identities=49% Similarity=0.856 Sum_probs=160.1
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.|||+|||. |.||++|+|+|+||+|++||+++||||.|+.||+++..++.|.+++|+|++.+.+++|+|+|+++.+..|
T Consensus 526 DGWLhTGDi-G~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~ 604 (691)
T KOG1256|consen 526 DGWLHTGDI-GEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSW 604 (691)
T ss_pred ccccccccc-eeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchhcEEEEEecChhhchhh
Confidence 489999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 82 ALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
+..+++.++++++|+++.+++.+..++..+.++.++..|+.++.|.+.+++|+.++|++|||.|++|..+.+.|+++|++
T Consensus 605 a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~ 684 (691)
T KOG1256|consen 605 AAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDE 684 (691)
T ss_pred HHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHH
Confidence 99889999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HhCCCC
Q psy2420 162 LYNPPN 167 (174)
Q Consensus 162 ly~~~~ 167 (174)
||+...
T Consensus 685 mY~~~~ 690 (691)
T KOG1256|consen 685 LYKEIK 690 (691)
T ss_pred HHhhcc
Confidence 998754
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4e-35 Score=256.79 Aligned_cols=164 Identities=50% Similarity=0.803 Sum_probs=154.2
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.+||+|||. |++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|.+|+|+|+....+++|+|+|+++.+..|
T Consensus 486 dgw~~TGDl-g~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~~~ 564 (651)
T PLN02736 486 DGWLHTGDI-GLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLKAW 564 (651)
T ss_pred CCCeeccce-EEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHHHH
Confidence 479999998 9999999999999999999987899999999999999999999999999775678999999999988899
Q ss_pred HHHcCCCC-ChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHH
Q psy2420 82 ALENGIPG-TLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIE 160 (174)
Q Consensus 82 ~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~ 160 (174)
++..+++. +..+.++++++.+.|.+.+++.+++.+|+.|++|++|.+++++|++++|++|++||++|+.|+++|+++|+
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~ 644 (651)
T PLN02736 565 AASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAIS 644 (651)
T ss_pred HHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHH
Confidence 98888763 67788899999999999999998888999999999999999999999999999999999999999999999
Q ss_pred HHhCCC
Q psy2420 161 DLYNPP 166 (174)
Q Consensus 161 ~ly~~~ 166 (174)
+||.++
T Consensus 645 ~~y~~~ 650 (651)
T PLN02736 645 DMYAEL 650 (651)
T ss_pred HHHhhc
Confidence 999865
No 7
>KOG1180|consensus
Probab=100.00 E-value=1.9e-35 Score=246.16 Aligned_cols=162 Identities=36% Similarity=0.580 Sum_probs=158.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKA 82 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~ 82 (174)
+||+|||. |.|.+||.|.|++|+||++|+.+||||+.+.||.+|+.+|+|.+.+||+++.+.+|+|+|||++..+..++
T Consensus 515 ~WF~TGDI-Ge~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s~~VaiVVPn~~~lt~lA 593 (678)
T KOG1180|consen 515 RWFRTGDI-GEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNKSKPVAIVVPNQKHLTKLA 593 (678)
T ss_pred EEEecccc-ceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccccceeEEEEcCCchHHHHHH
Confidence 49999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC-ChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHH
Q psy2420 83 LENGIPG-TLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIED 161 (174)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ 161 (174)
+++|+.. +++++|.++++.+++..+|.++++.++|..++.|..|.+.+++|+|++|++|...|++|+.|..+|+++|++
T Consensus 594 ~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~ 673 (678)
T KOG1180|consen 594 EKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLKRKEILAAYKKEIDR 673 (678)
T ss_pred HHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhhHHHHHHHHHHHHHH
Confidence 9999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCC
Q psy2420 162 LYNP 165 (174)
Q Consensus 162 ly~~ 165 (174)
+|++
T Consensus 674 ~Y~~ 677 (678)
T KOG1180|consen 674 LYKE 677 (678)
T ss_pred Hhcc
Confidence 9986
No 8
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-34 Score=252.61 Aligned_cols=163 Identities=28% Similarity=0.465 Sum_probs=153.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccce--EEEEeeCCCCcEEEEEEcChHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQ--IFVYGESLKSYIVAIVVPDVDVVK 79 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~--~~V~g~~~~~~~~a~v~~~~~~~~ 79 (174)
.+||+|||. |++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|.+ ++|++.+++++++|+|+|+.+.+.
T Consensus 535 dGw~~TGDi-g~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~ 613 (700)
T PTZ00216 535 DGWFHTGDV-GSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPARSYICALVLTDEAKAM 613 (700)
T ss_pred cCCeeccce-EEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCCceEEEEEecCHHHHH
Confidence 379999998 99999999999999999999779999999999999999999997 466666668899999999999999
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
.|++++++..++.++++++++.+.+.+.+++.+++.++.+|++|++|.+++++|++++|++|||+|++|+.+.++|+++|
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~~i 693 (700)
T PTZ00216 614 AFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYADLI 693 (700)
T ss_pred HHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHHHH
Confidence 99999998878899999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q psy2420 160 EDLYNP 165 (174)
Q Consensus 160 ~~ly~~ 165 (174)
++||+.
T Consensus 694 ~~ly~~ 699 (700)
T PTZ00216 694 KELFAD 699 (700)
T ss_pred HHHhcC
Confidence 999975
No 9
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-34 Score=253.58 Aligned_cols=162 Identities=22% Similarity=0.390 Sum_probs=146.2
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
.+||+|||. |++|++|+|+|+||+||+||+++|+||+|.+||++|.+||.|.+|+|+|++.+++++|+|+|+++.+..|
T Consensus 569 dGW~~TGDi-g~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~~~~~Alvv~d~~~~~~~ 647 (746)
T PTZ00342 569 DGYFKTGDI-VQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSMDGPLAIISVDKYLLFKC 647 (746)
T ss_pred CCcccCCcE-EEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCccccEEEEECCHHHHHHH
Confidence 489999998 9999999999999999999988999999999999999999999999999876789999999999999999
Q ss_pred HHHc------CCCC-Chhh-----hcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHH
Q psy2420 82 ALEN------GIPG-TLSV-----LCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRA 149 (174)
Q Consensus 82 ~~~~------~~~~-~~~~-----~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~ 149 (174)
+++. |++. ++.+ .+.++++.+++.+.+.+.+++.+|+.|+++++|++++++|++ ++++|||+|++|+
T Consensus 648 a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~-~~~lTpt~KlkR~ 726 (746)
T PTZ00342 648 LKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDT-NNYLTPTFKVKRF 726 (746)
T ss_pred HHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCC-CCccChhhhhhHH
Confidence 9875 3442 4555 445667899999999999777899999999999999999999 5799999999999
Q ss_pred HHHHHHH---HHHHHHhCC
Q psy2420 150 QLKSYFK---PQIEDLYNP 165 (174)
Q Consensus 150 ~i~~~y~---~~i~~ly~~ 165 (174)
.|.++|+ +.|++||++
T Consensus 727 ~v~~~y~~~i~~i~~~y~~ 745 (746)
T PTZ00342 727 YVFKDYAFFIDQVKKIYKN 745 (746)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999 667778875
No 10
>PTZ00297 pantothenate kinase; Provisional
Probab=99.97 E-value=9.8e-30 Score=235.74 Aligned_cols=162 Identities=25% Similarity=0.389 Sum_probs=136.5
Q ss_pred cccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHH-HHH
Q psy2420 4 FLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVK-CKA 82 (174)
Q Consensus 4 ~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~-~~~ 82 (174)
+-.|.+..+.|++||+|+|+||+||+||+|+|+||+|+.||+.|.++|+|.+++|+|++ +.+++|+|+|+++.+. .|+
T Consensus 836 pe~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~-~k~lvALVvpd~e~l~~~wa 914 (1452)
T PTZ00297 836 PRRTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADP-SRPIIAIVSPNRDTVEFEWR 914 (1452)
T ss_pred hHHHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecC-CCceEEEEEeCHHHHHHHHH
Confidence 44566655689999999999999999999999999999999999999999999999998 5569999999999998 999
Q ss_pred HHcCCCC--------ChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 83 LENGIPG--------TLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 83 ~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
.++|+.. ++.+++++ ..+.+.+.++.+.+..++..++++++|.+++++|++++|++|||+|++|+.|.++
T Consensus 915 ~~~gi~~~~~~~~~~~~~el~~~--~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~k 992 (1452)
T PTZ00297 915 QSHCMGEGGGPARQLGWTELVAY--ASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSY 992 (1452)
T ss_pred HHcCCCccccccccCCHHHHHHh--HHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHH
Confidence 9998752 34455432 1223444444444445588899999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC
Q psy2420 155 FKPQIEDLYNPPNP 168 (174)
Q Consensus 155 y~~~i~~ly~~~~~ 168 (174)
|+++|++||.+.++
T Consensus 993 Y~~~Ie~LY~~~~~ 1006 (1452)
T PTZ00297 993 FSSVIERFYSDVET 1006 (1452)
T ss_pred HHHHHHHHhccccc
Confidence 99999999997654
No 11
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.97 E-value=1.1e-29 Score=219.11 Aligned_cols=161 Identities=32% Similarity=0.495 Sum_probs=150.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~ 81 (174)
+|||+|||. |.+|++|+|+|+||+||+||+++|+||.|++||..+.++|+|.+++|+| +++.++.|+|+|+.+.+..|
T Consensus 448 DGWf~TGDl-g~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~~~AlIvp~~~~l~~~ 525 (613)
T COG1022 448 DGWFRTGDL-GELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDKKFLVALIVPDFDALEKW 525 (613)
T ss_pred cCCcccCce-eEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCCcceEEEEeCCHHHHHHH
Confidence 489999999 9999999999999999999999999999999999999999999999999 45899999999999999999
Q ss_pred HHHcCCC--CChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 82 ALENGIP--GTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 82 ~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
+...+.. .+..+++.++++.+.+...+.... ..+..+++++.+.+.++.|+++++.+|++.|++|..+.++|.+.|
T Consensus 526 a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~--~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i 603 (613)
T COG1022 526 AESLNKVISASREELARDPKLLKLILPRVNKGN--KRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEI 603 (613)
T ss_pred HHhccccccCCHHHHhhCHHHHHHHHHHHHHHh--hcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHH
Confidence 9887743 367889999999999999999995 556999999999999999999999999999999999999999999
Q ss_pred HHHhCCC
Q psy2420 160 EDLYNPP 166 (174)
Q Consensus 160 ~~ly~~~ 166 (174)
+.+|..-
T Consensus 604 ~~~y~~~ 610 (613)
T COG1022 604 EAVYSRQ 610 (613)
T ss_pred HHHhhcc
Confidence 9999864
No 12
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=9.1e-28 Score=209.48 Aligned_cols=161 Identities=18% Similarity=0.234 Sum_probs=140.7
Q ss_pred CCcccccCCceee-c---cCCcEEEEccCcCceecCCceeeccHHHH--HHHhcCcccceEEEEeeCCCCcEEEEEEcCh
Q psy2420 2 KKFLSKDKNEEIK-S---ESGALKIIDRKRHIFKLAQGEYIVPEKIE--AVYSKSLYVHQIFVYGESLKSYIVAIVVPDV 75 (174)
Q Consensus 2 ~~~~~tgd~~~~~-d---~~G~l~i~GR~~d~i~~s~G~~V~p~~iE--~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~ 75 (174)
++||+|||. |++ | ++|+|+|+||+||+|++++|++|+|.+|| .++.+||.|.+|+|+|.+ ++++.++|+|+.
T Consensus 451 dgw~~TGDl-g~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~-~~~~g~lv~p~~ 528 (624)
T PRK12582 451 EGFYRLGDA-ARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQD-RAFIGLLAWPNP 528 (624)
T ss_pred cCCccccce-EEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCC-CCcEEEEEecCH
Confidence 479999998 998 4 56999999999999998899999999885 677899999999999997 778899999998
Q ss_pred HHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCce-eeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 76 DVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFE-QVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~-~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
.....++...+. +..+.+..+++.+.+++.|.+++ ..++.|+ +|+++.+++++|...+|.+|++||++|+.+.++
T Consensus 529 ~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~ 604 (624)
T PRK12582 529 AACRQLAGDPDA--APEDVVKHPAVLAILREGLSAHN--AEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLER 604 (624)
T ss_pred HHHHHHHhcCCC--CHHHHhcCHHHHHHHHHHHHHHH--hhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHH
Confidence 877665543332 34556678899999999999995 6799999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC
Q psy2420 155 FKPQIEDLYNPPNP 168 (174)
Q Consensus 155 y~~~i~~ly~~~~~ 168 (174)
|+++|++||+....
T Consensus 605 y~~~i~~ly~~~~~ 618 (624)
T PRK12582 605 RAALVERLYAEPPG 618 (624)
T ss_pred HHHHHHHHhcCCCC
Confidence 99999999987543
No 13
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.95 E-value=4.4e-27 Score=204.81 Aligned_cols=163 Identities=19% Similarity=0.243 Sum_probs=138.1
Q ss_pred CCcccccCCceee----ccCCcEEEEccCcCceecCCceeec--cHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcCh
Q psy2420 2 KKFLSKDKNEEIK----SESGALKIIDRKRHIFKLAQGEYIV--PEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDV 75 (174)
Q Consensus 2 ~~~~~tgd~~~~~----d~~G~l~i~GR~~d~i~~s~G~~V~--p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~ 75 (174)
.+||+|||. |++ |++|+|+|+||+||+|++++|++|+ |.++|..+.+||.|.+|+|+|.+ ...++|+|++++
T Consensus 439 dgw~~TGDl-g~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~-~~~~~a~V~~~~ 516 (614)
T PRK08180 439 EGYYRSGDA-VRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHD-RDEIGLLVFPNL 516 (614)
T ss_pred CCceeccce-EEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCC-CCceEEEEEcCH
Confidence 379999998 999 5789999999999999988999877 67888888899999999999998 567899999998
Q ss_pred HHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 76 DVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
+....++.+. ...+..+.+..+++.+.+++.|..+. ......+++|+++.++++.|...+|.+|++||++|..+.+.|
T Consensus 517 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y 594 (614)
T PRK08180 517 DACRRLAGLL-ADASLAEVLAHPAVRAAFRERLARLN-AQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARR 594 (614)
T ss_pred HHHHHHHhhc-ccCCHHHHhcCHHHHHHHHHHHHHHH-hhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHh
Confidence 8766665443 22234455677889999999999886 234455679999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCC
Q psy2420 156 KPQIEDLYNPPNP 168 (174)
Q Consensus 156 ~~~i~~ly~~~~~ 168 (174)
+++|++||.....
T Consensus 595 ~~~i~~lY~~~~~ 607 (614)
T PRK08180 595 AALVEALYADEPD 607 (614)
T ss_pred HHHHHHHhCCCCC
Confidence 9999999987543
No 14
>KOG1176|consensus
Probab=99.94 E-value=3.3e-27 Score=201.72 Aligned_cols=123 Identities=24% Similarity=0.286 Sum_probs=107.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. |++|+||+|+|.||.||+||. +|++|+|.|||+.|.+||.|.||+|+|.++. ..|+|+|+++++..-
T Consensus 408 GW~~TGDi-Gy~D~DG~l~IvdR~KdlIk~-~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~l 485 (537)
T KOG1176|consen 408 GWFHTGDL-GYFDEDGYLYIVDRSKDLIKY-GGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTL 485 (537)
T ss_pred CccccCce-EEEcCCCeEEEecchhhheee-CCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcC
Confidence 89999999 999999999999999999997 9999999999999999999999999999876 579999998763210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
.. ++|.+++ +.++++|+.++.|.++++.+. |++||++|+.+++.|.+.
T Consensus 486 ----------------te--------~di~~~v-~k~l~~y~~~~~V~Fvd~lPK------s~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 486 ----------------TE--------KDIIEYV-RKKLPAYKLPGGVVFVDELPK------TPNGKILRRKLRDIAKKL 533 (537)
T ss_pred ----------------CH--------HHHHHHH-HhhCChhhccCeEEEeccCCC------CCcchHHHHHHHHHHHhc
Confidence 01 4555555 577888999999999998874 999999999999998763
No 15
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.89 E-value=1.4e-22 Score=172.87 Aligned_cols=123 Identities=20% Similarity=0.229 Sum_probs=104.0
Q ss_pred cccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHHH
Q psy2420 4 FLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVKC 80 (174)
Q Consensus 4 ~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~~ 80 (174)
||+|||. +..|+||+++|+||.||+||. .|++|+|.+||++|.+||.|.||+|+|.|+. ..+.|+|++.+....
T Consensus 397 ~y~tGD~-~~~DedGy~~i~GR~DDvI~v-sG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~- 473 (528)
T COG0365 397 WYRTGDW-AERDEDGYFWLHGRSDDVIKV-SGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEP- 473 (528)
T ss_pred eeecCce-eEEccCCCEEEEeeccceEec-cCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCCh-
Confidence 8999998 999999999999999999997 6999999999999999999999999998764 458899998765311
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+ + +.++|.++. +..+.+|..|+.|.++++.| +|.|||++|+.+++.+.+
T Consensus 474 ----------------~-~----L~~ei~~~v-r~~~~~~~~p~~i~fv~~LP------kT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 474 ----------------N-E----LAEEIRRHV-ARNIGPHAIPRKIRFVDELP------KTASGKIQRRLLRKILHK 522 (528)
T ss_pred ----------------H-H----HHHHHHHHH-HhccCcccCCceEEEecCCC------CCCcccHHHHHHHHHHhh
Confidence 1 3 334555544 45566799999999999887 499999999999988774
No 16
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=1.5e-22 Score=174.22 Aligned_cols=124 Identities=23% Similarity=0.275 Sum_probs=104.2
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. |++|++|+++|+||.||+|+. +|+||+|.+||.++.+||.|.+|+|+|.++. ..++|+|++++....
T Consensus 401 gW~~TGDl-g~~d~~G~l~i~gR~kd~I~~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~ 478 (534)
T COG0318 401 GWLRTGDL-GYVDEDGYLYIVGRLKDLIIS-GGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDA 478 (534)
T ss_pred Ceeeecce-EEEcCCccEEEEeccceEEEe-CCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCC
Confidence 79999998 999999999999999999996 9999999999999999999999999998864 578999998754110
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.... +++.+++ +..++.|++|+.|.++++.+ +|++||++|+.+++.+.+
T Consensus 479 ------------------~~~~----~~i~~~~-~~~l~~~~~P~~v~~v~~lP------~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 479 ------------------ELTA----EELRAFL-RKRLALYKVPRIVVFVDELP------RTASGKIDRRALREEYRA 527 (534)
T ss_pred ------------------CCCH----HHHHHHH-HhhhhcccCCeEEEEeCCCC------CCCchhhhHHHHHHHHHh
Confidence 0001 3344444 35789999999999997765 599999999999999887
No 17
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.88 E-value=1.9e-22 Score=170.29 Aligned_cols=125 Identities=23% Similarity=0.295 Sum_probs=104.0
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||+|+|.||.||+||. +|++|+|.+||..+.+||.|.+|+|+|.++. ..++|++++.+...
T Consensus 323 ~g~~~TGDl-~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~ 400 (452)
T PRK07445 323 QGIFETDDL-GYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSI 400 (452)
T ss_pred CCEEECCCE-EEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCCC
Confidence 379999998 999999999999999999996 8999999999999999999999999998754 35888888654310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
+ . +++.+.+ +++|++|++|+.+.++++.+ +|++||++|+.+++.|+++
T Consensus 401 ------------------~---~----~~l~~~~-~~~L~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 401 ------------------S---L----EELKTAI-KDQLSPFKQPKHWIPVPQLP------RNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred ------------------C---H----HHHHHHH-HHhCCcccCCeEEEEecCCC------CCCCcccCHHHHHHHHHHh
Confidence 0 1 2333333 46799999999999987754 6999999999999999987
Q ss_pred HH
Q psy2420 159 IE 160 (174)
Q Consensus 159 i~ 160 (174)
|.
T Consensus 449 ~~ 450 (452)
T PRK07445 449 LG 450 (452)
T ss_pred hC
Confidence 74
No 18
>KOG1177|consensus
Probab=99.88 E-value=1.7e-22 Score=166.79 Aligned_cols=127 Identities=20% Similarity=0.304 Sum_probs=109.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+|++|||. +.+|++|++.|+||.||+|+. +|+||+|.+||+.|-+||.|.++.|+|.++. ..+||.|.+.....
T Consensus 460 drW~~TGDi-~~m~enG~i~iVGRskdmI~r-GGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e 537 (596)
T KOG1177|consen 460 DRWYDTGDI-AVMDENGTIEIVGRSKDMIIR-GGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAE 537 (596)
T ss_pred ccceecCce-EEEcCCCcEEEEEcccCeEEe-CCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccc
Confidence 389999999 999999999999999999996 9999999999999999999999999999875 35888888765432
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
. ....+.|+++| +.+++.|++|++|.++++ | |+|.||||+|.+|+++....
T Consensus 538 ~----------------------~~t~E~lKa~C-k~klaHFKiPky~vf~~~-F-----PlT~tGKIqKFeir~~~k~~ 588 (596)
T KOG1177|consen 538 G----------------------KTTAETLKAMC-KGKLAHFKIPKYFVFVDE-F-----PLTTTGKIQKFEIREMSKGH 588 (596)
T ss_pred c----------------------cccHHHHHHHH-hcccccccCCcEEEEecc-C-----cccccccchhHHHHHHHHhh
Confidence 1 12337888999 467999999999999987 5 37999999999999998755
Q ss_pred H
Q psy2420 159 I 159 (174)
Q Consensus 159 i 159 (174)
+
T Consensus 589 l 589 (596)
T KOG1177|consen 589 L 589 (596)
T ss_pred c
Confidence 4
No 19
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.88 E-value=4.1e-22 Score=174.93 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=105.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+|+|+||.||+||. +|++|+|.+||++|.+||.|.+|+|+|.++. ..++|+|+++++..
T Consensus 491 ~g~~~TGDl-g~~d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~ 568 (647)
T PTZ00237 491 PGYYNSGDL-GFKDENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQS 568 (647)
T ss_pred CCEEECCcE-EEECCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCcc
Confidence 479999998 999999999999999999997 7999999999999999999999999998863 57899999864310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. .....++ +.++|.+++ +.+|++|++|+.|+++++.+ +|++||++|+.+++.+..
T Consensus 569 ~-------------~~~~~~~----l~~~i~~~~-~~~l~~~~~P~~i~~v~~lP------~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 569 N-------------QSIDLNK----LKNEINNII-TQDIESLAVLRKIIIVNQLP------KTKTGKIPRQIISKFLND 623 (647)
T ss_pred c-------------cCCCHHH----HHHHHHHHH-HhhcCccccCcEEEEcCCCC------CCCCccEeHHHHHHHHcC
Confidence 0 0001122 334555555 46799999999999998765 699999999999987643
No 20
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.88 E-value=5.1e-22 Score=169.11 Aligned_cols=129 Identities=13% Similarity=0.155 Sum_probs=99.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhc-CcccceEEEEeeCCC----CcEEEEE---EcC
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSK-SLYVHQIFVYGESLK----SYIVAIV---VPD 74 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~-~~~V~~~~V~g~~~~----~~~~a~v---~~~ 74 (174)
.||+|||. |++|+||+|+|+||.||+||. +|++|+|.+||++|.+ ||.|.+|+|+|.++. ..++|+| ++.
T Consensus 357 ~~~~TGDl-g~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~ 434 (499)
T PLN03051 357 PLRRHGDI-MKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEK 434 (499)
T ss_pred ceeecCCe-EEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceec
Confidence 37899998 999999999999999999997 8999999999999985 999999999998753 3577777 554
Q ss_pred hHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 75 VDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
++.. ....+++++.+++.+ ...|++|..|..|.++++.+ +|++||++|+.+++.
T Consensus 435 ~~~~---------------~~~~~~l~~~~~~~l-----~~~l~~~~~~~~i~~v~~lP------~t~~GKi~r~~L~~~ 488 (499)
T PLN03051 435 KGFD---------------QARPEALQKKFQEAI-----QTNLNPLFKVSRVKIVPELP------RNASNKLLRRVLRDQ 488 (499)
T ss_pred cccc---------------ccchHHHHHHHHHHH-----HhhcCCccCCceEEEcCCCC------CCCCccHHHHHHHHH
Confidence 3210 001234444444444 35588877777788887654 699999999999987
Q ss_pred HHHHH
Q psy2420 155 FKPQI 159 (174)
Q Consensus 155 y~~~i 159 (174)
+...+
T Consensus 489 ~~~~~ 493 (499)
T PLN03051 489 LKKEL 493 (499)
T ss_pred HHHhh
Confidence 66544
No 21
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.87 E-value=3.5e-22 Score=175.40 Aligned_cols=125 Identities=14% Similarity=0.070 Sum_probs=102.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||+|+|+||.||+||. +|++|+|.+||++|.+||.|.+|+|+|.++. ..++|+|++.+...
T Consensus 498 ~g~~~tGDl-g~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~ 575 (652)
T TIGR01217 498 PGVWRHGDW-ITLTPRGGIVIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGAT 575 (652)
T ss_pred CCEEEcCCc-EEECCCCcEEEEecccCeEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCC
Confidence 368899998 999999999999999999996 8999999999999999999999999998754 46888998765310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.++++.+ +|.+.+ +.+|++|++|+.|.++++.+ +|++||++|+.+++.+.
T Consensus 576 -----------------~~~~~~~----~l~~~~-~~~l~~~~~P~~i~~v~~lP------~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 576 -----------------LDDALLD----RIKRTI-RAGLSPRHVPDEIIEVPGIP------HTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred -----------------CCHHHHH----HHHHHH-HhhCCCCcCCCEEEECCCCC------CCCCccChHHHHHHHHc
Confidence 0123333 444444 46799999999999988765 59999999999998764
No 22
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.87 E-value=8.4e-22 Score=169.96 Aligned_cols=144 Identities=22% Similarity=0.256 Sum_probs=107.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+++|.||.||+||. +|++|+|.+||+++.+||.|.+|+|+|.++. ..++|+|++.++..
T Consensus 413 ~g~~~TGDl-~~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~ 490 (563)
T PLN02860 413 DGWLDTGDI-GWIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWI 490 (563)
T ss_pred CCeEEccce-EEEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccc
Confidence 379999998 999999999999999999997 8999999999999999999999999998754 46889888765421
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
+.. . .......... ...+.+..++++.+|++|++|+.|.++.+.++ +|++||++|+.+++.+.+.
T Consensus 491 --~~~----~-~~~~~~~~~~---~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP-----~t~~GKi~r~~L~~~~~~~ 555 (563)
T PLN02860 491 --WSD----N-EKENAKKNLT---LSSETLRHHCREKNLSRFKIPKLFVQWRKPFP-----LTTTGKIRRDEVRREVLSH 555 (563)
T ss_pred --ccc----c-cchhhccccc---ccHHHHHHHHhhCcccccccceEEEEEecCCC-----CCcccchhHHHHHHHHHHH
Confidence 000 0 0000000000 11234555553346999999999887644442 6999999999999988776
Q ss_pred HHHH
Q psy2420 159 IEDL 162 (174)
Q Consensus 159 i~~l 162 (174)
+..+
T Consensus 556 ~~~~ 559 (563)
T PLN02860 556 LQSL 559 (563)
T ss_pred Hhcc
Confidence 6654
No 23
>PLN02654 acetate-CoA ligase
Probab=99.87 E-value=7.2e-22 Score=173.86 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=103.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||+++|+||.||+||. +|++|+|.+||+++.+||.|.+|+|+|.++. ..++|+|++.+...
T Consensus 512 ~g~~~TGD~-~~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~ 589 (666)
T PLN02654 512 AGYYFSGDG-CSRDKDGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVP 589 (666)
T ss_pred CCEEEeCce-EEECCCCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCC
Confidence 489999998 999999999999999999997 7999999999999999999999999998754 46888998765310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.++++. ++|.+.+ +.+|++|++|+.|.++++.+ +|++||++|+.+++.+.
T Consensus 590 -----------------~~~~l~----~~l~~~~-~~~L~~~~~P~~i~~v~~lP------~T~sGKi~r~~l~~~~~ 639 (666)
T PLN02654 590 -----------------YSEELR----KSLILTV-RNQIGAFAAPDKIHWAPGLP------KTRSGKIMRRILRKIAS 639 (666)
T ss_pred -----------------CCHHHH----HHHHHHH-HHhCCCCcCCCEEEECCCCC------CCCCcCchHHHHHHHHc
Confidence 022333 3444444 57799999999999987765 59999999999988764
No 24
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.86 E-value=1.2e-21 Score=171.94 Aligned_cols=126 Identities=17% Similarity=0.073 Sum_probs=102.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||+|+|+||.||+||. +|++|+|.+||.+|.+||.|.+|+|+|.++. ..++++|++.++..
T Consensus 497 ~g~~~TGDl-~~~d~dG~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~ 574 (655)
T PRK03584 497 PGVWRHGDW-IEITEHGGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVT 574 (655)
T ss_pred CCEeecCCe-EEECCCCeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCC
Confidence 368899997 999999999999999999997 8999999999999999999999999998753 46888888765310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.++.+.+ +|.+.+ ...|++|++|..|+++++.+ +|++||++|+.+++.+..
T Consensus 575 -----------------~~~~~~~----~l~~~~-~~~L~~~~~P~~i~~v~~lP------~t~sGKi~r~~lr~~~~~ 625 (655)
T PRK03584 575 -----------------LDDALRA----RIRTTI-RTNLSPRHVPDKIIAVPDIP------RTLSGKKVELPVKKLLHG 625 (655)
T ss_pred -----------------CcHHHHH----HHHHHH-HhhCCCCcCCCEEEECCCCC------CCCCccchHHHHHHHHcC
Confidence 0123333 344444 56799999999999998765 699999999999987653
No 25
>KOG1175|consensus
Probab=99.86 E-value=1.8e-21 Score=167.53 Aligned_cols=126 Identities=16% Similarity=0.188 Sum_probs=109.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
++++|||. ++.|+||+++|+||.||+|+. +|.++++.+||+++.+||.|.||+|+|.++. +.+.|||++.+...
T Consensus 475 g~y~tGD~-~~rd~dGY~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~- 551 (626)
T KOG1175|consen 475 GYYFTGDG-GRRDEDGYYWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSH- 551 (626)
T ss_pred ceEEecCc-eEEcCCceEEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCC-
Confidence 78999998 999999999999999999997 7999999999999999999999999998864 57899999887521
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
..+++.++|...+ +..+.+|..|+.|.++++.+ +|.|||+.|+.+++.-+.+
T Consensus 552 ----------------~~~~L~kel~~~V-----R~~igp~a~P~~I~~v~~LP------kTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 552 ----------------DPEQLTKELVKHV-----RSVIGPYAVPRLIVFVPGLP------KTRSGKIMRRALRKIASGK 603 (626)
T ss_pred ----------------ChHHHHHHHHHHH-----HhhcCcccccceeEecCCCC------ccccchhHHHHHHHHhccC
Confidence 1355665665666 67899999999999998876 4999999999999886654
No 26
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.85 E-value=4.1e-21 Score=167.48 Aligned_cols=125 Identities=15% Similarity=0.171 Sum_probs=102.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+|+|+||.||+||+ +|++|+|.+||++|.+||.|.+|+|+|.++. ..++|+|++.+...
T Consensus 474 ~g~~~TGDl-~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~ 551 (625)
T TIGR02188 474 PGYYFTGDG-ARRDKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYE 551 (625)
T ss_pred CCEEECCce-EEEcCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCC
Confidence 479999998 999999999999999999997 7999999999999999999999999997653 46888888765421
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.+..+. ++|.+.+ +..|++|++|+.|.++++.+ +|++||++|+.+++.+.
T Consensus 552 -----------------~~~~~~----~~l~~~~-~~~l~~~~~P~~i~~v~~lP------~t~sGKi~r~~l~~~~~ 601 (625)
T TIGR02188 552 -----------------PDDELR----KELRKHV-RKEIGPIAKPDKIRFVPGLP------KTRSGKIMRRLLRKIAA 601 (625)
T ss_pred -----------------CCHHHH----HHHHHHH-HhhcCCCccCcEEEECCCCC------CCCCccchHHHHHHHHc
Confidence 012233 3444444 46799999999999987765 69999999999987754
No 27
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.85 E-value=6e-21 Score=166.79 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=101.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|+|+|+||.||+||+ +|++|+|.+||++|.+||.|.+|+|+|.++. ..++++|++.+....
T Consensus 472 ~~~~TGD~-g~~d~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~ 549 (628)
T TIGR02316 472 PLYSSFDW-GIRDEDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSA 549 (628)
T ss_pred CEEECCce-EEEcCCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCccc
Confidence 59999998 999999999999999999997 8999999999999999999999999998754 457888887543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.+......+. ++|.+++ ...|++|++|+.|+++++.+ +|++||++|+.+++.+.
T Consensus 550 ------------~~~~~~~~~~----~~i~~~~-~~~L~~~~~P~~v~~v~~lP------~t~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 550 ------------GDAHDPHAVE----TGMMDCV-VRQLGAVARPARVYFVAALP------KTRSGKLLRRSIQALAE 603 (628)
T ss_pred ------------ccccchHHHH----HHHHHHH-HHhcCCCcCCCEEEEcCCCC------CCCchHHHHHHHHHHHc
Confidence 0000011233 3444444 56799999999999998765 59999999999987653
No 28
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.84 E-value=9.4e-21 Score=165.66 Aligned_cols=125 Identities=17% Similarity=0.200 Sum_probs=101.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+|+|.||.||+||+ +|++|+|.+||++|.++|.|.+|+|+|.++. ..++|+|++.++..
T Consensus 482 ~g~~~TGDl-~~~d~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~ 559 (637)
T PRK00174 482 KGMYFTGDG-ARRDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEE 559 (637)
T ss_pred CCEEECCce-EEEcCCCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCC
Confidence 479999998 999999999999999999997 7999999999999999999999999997653 46888888765320
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.++.+.+ +|.+.+ ...|++|++|..|.++++.+ +|++||++|+.+++.+.
T Consensus 560 -----------------~~~~~~~----~l~~~l-~~~l~~~~~P~~i~~v~~lP------~t~~GKi~R~~L~~~~~ 609 (637)
T PRK00174 560 -----------------PSDELRK----ELRNWV-RKEIGPIAKPDVIQFAPGLP------KTRSGKIMRRILRKIAE 609 (637)
T ss_pred -----------------CCHHHHH----HHHHHH-HhhcCCccCCCEEEEcCCCC------CCCCcchHHHHHHHHHc
Confidence 0122333 344444 46799999999999987654 69999999999987644
No 29
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.84 E-value=1.2e-20 Score=164.60 Aligned_cols=129 Identities=18% Similarity=0.171 Sum_probs=102.2
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|+|+|.||.||+||+ +|++|+|.+||++|.+||.|.+|+|+|.++. ..++++|++.+....
T Consensus 473 ~~~~TGDl-~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~ 550 (629)
T PRK10524 473 QVYSTFDW-GIRDADGYYFILGRTDDVINV-AGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSL 550 (629)
T ss_pred cEEEcCCc-EEEcCCCcEEEEEEecCeEEe-CCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCcc
Confidence 69999998 999999999999999999998 7999999999999999999999999998754 468888887643110
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
........+. ++|.+.+ +..|++|++|+.|.++++.+ +|++||++|+.+++.+.
T Consensus 551 ------------~~~~~~~~~~----~~i~~~~-~~~l~~~~~P~~i~~v~~lP------~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 551 ------------ADREARLALE----KEIMALV-DSQLGAVARPARVWFVSALP------KTRSGKLLRRAIQAIAE 604 (629)
T ss_pred ------------ccccchHHHH----HHHHHHH-HhhcCCCcCCCEEEEcCCCC------CCCCcchHHHHHHHHHc
Confidence 0000012233 3444444 56799999999999987654 69999999999987653
No 30
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.84 E-value=1.6e-20 Score=153.43 Aligned_cols=121 Identities=19% Similarity=0.205 Sum_probs=97.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++ ++|.|++.||.||+||. +|++|+|.+||..+.++|.|.+|+|+|.++. ..+++++++....
T Consensus 234 g~~~TGDl-~~~-~~g~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~-- 308 (358)
T PRK07824 234 GWFRTDDL-GAL-DDGVLTVLGRADDAIST-GGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGP-- 308 (358)
T ss_pred CceecccE-EEE-eCCEEEEEeccCCeEEE-CCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCC--
Confidence 59999998 999 89999999999999997 8999999999999999999999999997643 3577777654321
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.... +++.+.+ ++.++.|++|..|.++++.+ +|++||++|+.+++.|.+
T Consensus 309 ------------------~~~~----~~i~~~~-~~~l~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 309 ------------------APTL----EALRAHV-ARTLDRTAAPRELHVVDELP------RRGIGKVDRRALVRRFAG 357 (358)
T ss_pred ------------------CcCH----HHHHHHH-HhhCccccCCCEEEEecCCC------CCCCccccHHHHHHHhhc
Confidence 0111 2333333 46789999999999987654 699999999999988754
No 31
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=1.2e-20 Score=172.56 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=98.1
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC--CcEEEEEEcChHHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK--SYIVAIVVPDVDVVK 79 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~--~~~~a~v~~~~~~~~ 79 (174)
.+||+|||. +++|+||+|+|.||+||+||+ +|++|+|.+||..|.+||.|.+|+|+|.++. ..++|+|++.+...
T Consensus 835 dgw~~TGDl-g~~d~dG~l~~~GR~dd~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~~- 911 (994)
T PRK07868 835 DTWISTEYL-FRRDDDGDYWLVDRRGSVIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGGRQLAVAAVTLRPGAA- 911 (994)
T ss_pred CEEEeccce-EEEcCCCCEEEeccCCCEEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecCCCCceEEEEEEeCCCCc-
Confidence 479999998 999999999999999999997 7889999999999999999999999998754 45788888764310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
. + . ++|.++++ .+++|++|+.|+++++.+ +|++||++|+.++++
T Consensus 912 ---------------~-~---~----~~L~~~l~--~l~~y~vP~~i~~v~~lP------~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 912 ---------------I-T---A----ADLTEALA--SLPVGLGPDIVHVVPEIP------LSATYRPTVSALRAA 955 (994)
T ss_pred ---------------C-C---H----HHHHHHHH--hCCCCcCCeEEEEeCCCC------CCccccEehHHHHhc
Confidence 0 0 0 24444542 389999999999998765 699999999999754
No 32
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.4e-20 Score=154.71 Aligned_cols=114 Identities=15% Similarity=0.102 Sum_probs=92.6
Q ss_pred CCcccccCCceee-ccCCcEEEEccCcCceecCCc---eeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcC
Q psy2420 2 KKFLSKDKNEEIK-SESGALKIIDRKRHIFKLAQG---EYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPD 74 (174)
Q Consensus 2 ~~~~~tgd~~~~~-d~~G~l~i~GR~~d~i~~s~G---~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~ 74 (174)
++||+|||. |++ |++|+|+|.||.| +| +||+|. ||++|.+||.|.+|+|+|.++. ..++|+|++.
T Consensus 208 dgW~~TGDl-g~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~ 279 (365)
T PRK09188 208 RIWLATGKK-VYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAE 279 (365)
T ss_pred CcEEeCCCE-EEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEEC
Confidence 489999998 998 7999999999997 68 899999 9999999999999999998754 4588888865
Q ss_pred hHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 75 VDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
... + .+++.+++ +.+|++ ++|++|.++++.+ +|++||++|+.+++.
T Consensus 280 ~~~-------------------~-------~~el~~~l-~~~L~~-kvP~~v~~v~~lP------~t~~GKi~R~~Lr~~ 325 (365)
T PRK09188 280 LPA-------------------D-------EKSLRARL-AGAKPP-KPPEHIQPVAALP------RDADGTVRDDILRLI 325 (365)
T ss_pred CCC-------------------C-------HHHHHHHH-Hhhchh-cCCcEEEEECCCC------CCCCCCccHHHHHHH
Confidence 210 0 02444444 467889 9999999998755 699999999999876
Q ss_pred HHH
Q psy2420 155 FKP 157 (174)
Q Consensus 155 y~~ 157 (174)
..+
T Consensus 326 ~~~ 328 (365)
T PRK09188 326 AMN 328 (365)
T ss_pred hhc
Confidence 533
No 33
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.83 E-value=1.6e-20 Score=161.26 Aligned_cols=119 Identities=19% Similarity=0.276 Sum_probs=97.7
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+++|.||.||+||. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++|+|++.++..
T Consensus 426 ~g~~~TGDl-~~~~~~g~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~ 503 (549)
T PRK07788 426 DGLLSSGDV-GYFDEDGLLFVDGRDDDMIVS-GGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAA 503 (549)
T ss_pred CCceecCce-EEEcCCCCEEEeccCcceEEE-CCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCC
Confidence 479999998 999999999999999999996 8999999999999999999999999997754 45888888765310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
. + . +++.+++ +..|++|++|.+|.++++.+ +|++||++|+.+++
T Consensus 504 ----------------~-~---~----~~l~~~~-~~~l~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~ 547 (549)
T PRK07788 504 ----------------L-D---E----DAIKDYV-RDNLARYKVPRDVVFLDELP------RNPTGKVLKRELRE 547 (549)
T ss_pred ----------------C-C---H----HHHHHHH-HHhhhcCCCCcEEEEeCCCC------CCCCcCEeHHHhhc
Confidence 0 0 1 2333333 45689999999999987654 69999999999864
No 34
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.83 E-value=4.8e-20 Score=159.74 Aligned_cols=134 Identities=19% Similarity=0.211 Sum_probs=103.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|+|+|.||.+|+|+. +|++|+|.+||+++.+||.|.+|+|+|.++. ..++|+|++......
T Consensus 420 gw~~TGDl-g~~d~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~ 497 (579)
T PLN03102 420 GWLNTGDV-GVIHPDGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETT 497 (579)
T ss_pred CceecCce-EEEcCCCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccc
Confidence 69999998 999999999999999999997 8999999999999999999999999998753 468888887643210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
... ...+... -. .++.+++ +..|++|++|..++++++.+ +|++||++|+.+++.++..+
T Consensus 498 ~~~-------~~~~~~~---~~----~~l~~~~-~~~L~~~~~P~~i~~~~~~P------~t~~gKi~r~~L~~~~~~~~ 556 (579)
T PLN03102 498 KED-------RVDKLVT---RE----RDLIEYC-RENLPHFMCPRKVVFLQELP------KNGNGKILKPKLRDIAKGLV 556 (579)
T ss_pred ccc-------ccccccc---cH----HHHHHHH-HhhcccccCCeEEEEcccCC------CCCcccccHHHHHHHHHHhh
Confidence 000 0000000 01 2344444 46799999999999987654 69999999999999887754
No 35
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.83 E-value=4.7e-20 Score=163.91 Aligned_cols=127 Identities=16% Similarity=0.136 Sum_probs=103.1
Q ss_pred cccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHh-cCcccceEEEEeeCCC----CcEEEEEEcC--hH
Q psy2420 4 FLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYS-KSLYVHQIFVYGESLK----SYIVAIVVPD--VD 76 (174)
Q Consensus 4 ~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~-~~~~V~~~~V~g~~~~----~~~~a~v~~~--~~ 76 (174)
||+|||. +++|++|+++|+||.||+||. +|++|+|.+||+++. .||.|.+|+|+|.++. ..++++|++. ++
T Consensus 590 ~~~tGDl-~~~d~dG~l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g 667 (728)
T PLN03052 590 LRRHGDI-FERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPG 667 (728)
T ss_pred EEecCce-EEECCCCeEEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCC
Confidence 8899998 999999999999999999997 899999999999995 8999999999997643 3588888875 21
Q ss_pred HHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 77 VVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
. ....+++++.+.+.| ..+|+++..|+.|+++++.+ +|++||++|+.+++.+.
T Consensus 668 ~----------------~~~~~~L~~~i~~~i-----~~~l~~~~~p~~i~~v~~lP------~T~sGKi~Rr~Lr~~~~ 720 (728)
T PLN03052 668 S----------------NPDLNELKKIFNSAI-----QKKLNPLFKVSAVVIVPSFP------RTASNKVMRRVLRQQLA 720 (728)
T ss_pred C----------------CCCHHHHHHHHHHHH-----HhhcCCccCCCEEEEcCCCC------CCCchHHHHHHHHHHHH
Confidence 1 001134444444444 46789999999999988765 59999999999999887
Q ss_pred HHH
Q psy2420 157 PQI 159 (174)
Q Consensus 157 ~~i 159 (174)
...
T Consensus 721 ~~~ 723 (728)
T PLN03052 721 QEL 723 (728)
T ss_pred hhh
Confidence 655
No 36
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.83 E-value=4.4e-20 Score=158.76 Aligned_cols=119 Identities=10% Similarity=0.069 Sum_probs=93.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccce------EEEEeeCCCC-cEEEEEEcCh
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQ------IFVYGESLKS-YIVAIVVPDV 75 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~------~~V~g~~~~~-~~~a~v~~~~ 75 (174)
+||+|||. |++|++|+|+|.||.||+||. +|++|+|.+||++|.+||.|.+ |+|+|.++.. .+++++++..
T Consensus 410 ~w~~TGD~-g~~d~~G~l~~~GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 487 (539)
T PRK06334 410 TWYVTGDL-GYVDRHGELFLKGRLSRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEKVRLCLFTTFPT 487 (539)
T ss_pred eeEECCCE-EEECCCCeEEEEeccCCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCceEEEEEEeccC
Confidence 69999998 999999999999999999997 8999999999999999999998 8889887442 3344444221
Q ss_pred HHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 76 DVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
. . +++.++++...++.|++|+.+.++++.+ +|++||++|+.+++..
T Consensus 488 ~------------------------~----~~~~~~l~~~~~~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 488 S------------------------I----SEVNDILKNSKTSSILKISYHHQVESIP------MLGTGKPDYCSLNALA 533 (539)
T ss_pred C------------------------h----HHHHHHHHhcCCcccccchheeeecccc------cccCCcccHHHHHHHH
Confidence 1 0 2334444333478999999999887755 6999999999998764
Q ss_pred HH
Q psy2420 156 KP 157 (174)
Q Consensus 156 ~~ 157 (174)
..
T Consensus 534 ~~ 535 (539)
T PRK06334 534 KS 535 (539)
T ss_pred HH
Confidence 44
No 37
>PRK07529 AMP-binding domain protein; Validated
Probab=99.83 E-value=4.5e-20 Score=161.52 Aligned_cols=125 Identities=16% Similarity=0.131 Sum_probs=99.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+|++.||.||+||. +|++|+|.+||++|.+||.|.+|+|+|.++. ..++|+|++.+...
T Consensus 444 ~gw~~TGDl-g~~d~dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~ 521 (632)
T PRK07529 444 DGWLNTGDL-GRIDADGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGAS 521 (632)
T ss_pred CCceEcCcE-EEEcCCceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCC
Confidence 369999998 999999999999999999996 8999999999999999999999999998754 46888888764310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCC-CceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLR-NFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~-~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. .. +++.+++ ...++ .+++|+.|.++++.+ +|++||++|+.+++.+..
T Consensus 522 ~----------------~~--------~~l~~~~-~~~l~~~~~~P~~i~~v~~lP------~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 522 A----------------TE--------AELLAFA-RDHIAERAAVPKHVRILDALP------KTAVGKIFKPALRRDAIR 570 (632)
T ss_pred C----------------CH--------HHHHHHH-HHhcchhccCCcEEEEecCCC------CCCCCcccHHHHHHHHHH
Confidence 0 01 2233333 24454 578999999997754 699999999999988766
Q ss_pred HH
Q psy2420 158 QI 159 (174)
Q Consensus 158 ~i 159 (174)
.+
T Consensus 571 ~~ 572 (632)
T PRK07529 571 RV 572 (632)
T ss_pred HH
Confidence 43
No 38
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.83 E-value=7.4e-20 Score=157.16 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=101.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|++++.||.+|+||. +|++|+|.+||.++..||.|.+|+|+|.++. ..+++++++.+..
T Consensus 401 ~g~~~TGDl-g~~d~~g~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~- 477 (540)
T PRK05857 401 DGWVNTGDL-LERREDGFFYIKGRSSEMIIC-GGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAEL- 477 (540)
T ss_pred CCceeccce-EEEcCCceEEEeccccccEec-CCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCC-
Confidence 479999998 999999999999999999996 8999999999999999999999999998753 3455666654321
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
++...+.+.+.+.+.. +..+++|++|+.|.++++.+ +|++||++|+.+++..++
T Consensus 478 ------------------~~~~~~~l~~~~~~~~-~~~l~~~~~P~~v~~~~~iP------~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 478 ------------------DESAARALKHTIAARF-RRESEPMARPSTIVIVTDIP------RTQSGKVMRASLAAAATA 531 (540)
T ss_pred ------------------ChhhHHHHHHHHHHHH-HhhhccccCCeEEEEhhcCC------CCCCcceeHHHHHHhhhh
Confidence 0111123334444444 46789999999999998765 599999999999987765
No 39
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.82 E-value=2.8e-20 Score=161.51 Aligned_cols=123 Identities=19% Similarity=0.179 Sum_probs=96.1
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC----CcEEEEEEcChHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK----SYIVAIVVPDVDVV 78 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~----~~~~a~v~~~~~~~ 78 (174)
+||+|||. +++|++|+|++.||.||+||+ +|++|+|.+||+.+.++|.|.+|+|+|.++. ...+++++...+..
T Consensus 439 ~~~~TGDl-g~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~ 516 (600)
T PRK08279 439 AWFNTGDL-MRDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE 516 (600)
T ss_pred ceEeecce-EEEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCcc
Confidence 69999998 999999999999999999998 8999999999999999999999999987532 22344444332100
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
.-. +.+.+++ +.+|+.|++|+.|+++++.+ +|++||++|+.+++.+.+.
T Consensus 517 --------------------~~~----~~l~~~l-~~~L~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 517 --------------------FDL----AALAAHL-YERLPAYAVPLFVRLVPELE------TTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred --------------------CCH----HHHHHHH-HhhCccccCCeEEEeecCCC------CCcchhhhHHHHhhcCCCc
Confidence 001 2333333 46799999999999997754 6999999999998765543
No 40
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.82 E-value=4.7e-20 Score=159.21 Aligned_cols=123 Identities=19% Similarity=0.216 Sum_probs=100.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|++++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++|+|++.++..
T Consensus 432 gw~~TGDl-~~~~~~g~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~- 508 (570)
T PRK04319 432 DWYVSGDS-AYMDEDGYFWFQGRVDDVIKT-SGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYE- 508 (570)
T ss_pred CceEeCcE-EEECCCeeEEEEecCCCEEEE-CCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999997753 45777787654310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
..+.+.+ ++...+ +++|+.|++|+.|.++++.+ +|++||++|+.+++..
T Consensus 509 ----------------~~~~~~~----~l~~~~-~~~l~~~~~P~~i~~v~~iP------~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 509 ----------------PSEELKE----EIRGFV-KKGLGAHAAPREIEFKDKLP------KTRSGKIMRRVLKAWE 557 (570)
T ss_pred ----------------CCHHHHH----HHHHHH-HHhcccccCCcEEEEeCCCC------CCCchhhhHHHHHHHH
Confidence 0123333 344444 46799999999999987654 6999999999998764
No 41
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.82 E-value=3.7e-20 Score=173.79 Aligned_cols=151 Identities=15% Similarity=0.111 Sum_probs=105.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHH--
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDV-- 77 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~-- 77 (174)
+||+|||. +++++||+|+|+||.||+||+ +|++|+|.+||.+|.+||.|.+|+|++.++. ..++|+|++....
T Consensus 678 ~~y~TGDl-g~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~ 755 (1389)
T TIGR03443 678 RLYRTGDL-GRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDE 755 (1389)
T ss_pred ceeecCCc-eeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCcccc
Confidence 69999998 999999999999999999997 9999999999999999999999998875432 4688998876221
Q ss_pred HHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 78 VKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
...+........+...++............+.+.+ +.+||.|++|..++++++.+ +|++||++|+.+.+.+..
T Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Lp~y~~P~~~~~~~~lP------~t~~GKidr~~L~~~~~~ 828 (1389)
T TIGR03443 756 LEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYL-KKKLPSYAIPTVIVPLKKLP------LNPNGKVDKPALPFPDTA 828 (1389)
T ss_pred ccccccccccccccccchhhhhhhhhhHHHHHHHH-HhhCCcccCCceEEEcccCC------CCCCccccHhhcCCCchh
Confidence 11000000000000001111111112234455555 57899999999998887654 699999999999866655
Q ss_pred HHHHH
Q psy2420 158 QIEDL 162 (174)
Q Consensus 158 ~i~~l 162 (174)
.++.+
T Consensus 829 ~~~~~ 833 (1389)
T TIGR03443 829 QLAAV 833 (1389)
T ss_pred hhhhh
Confidence 55543
No 42
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.82 E-value=1.3e-19 Score=152.48 Aligned_cols=120 Identities=29% Similarity=0.429 Sum_probs=98.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||.|||. +++| +|+|++.||++|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++|+|+++...
T Consensus 331 ~~~~~TGD~-~~~~-~g~l~~~gR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~- 406 (458)
T PRK09029 331 EGWFATRDR-GEWQ-NGELTILGRLDNLFFS-GGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSEA- 406 (458)
T ss_pred CCccCCCCc-EEEe-CCEEEEecccccceee-CCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCccc-
Confidence 379999998 9999 9999999999999997 8999999999999999999999999998754 3578888765211
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.. +++.+++ +.+|++|++|..+.++++.+ +|++||++|+.+++..+.
T Consensus 407 ---------------------~~----~~l~~~~-~~~l~~~~~P~~~~~~~~~p------~t~~gKi~r~~L~~~~~~ 453 (458)
T PRK09029 407 ---------------------AV----VNLAEWL-QDKLARFQQPVAYYLLPPEL------KNGGIKISRQALKEWVAQ 453 (458)
T ss_pred ---------------------CH----HHHHHHH-HhhchhccCCeEEEEecccc------cCcCCCcCHHHHHHHHHh
Confidence 01 2344444 46799999999999987655 599999999999876654
No 43
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.82 E-value=6.6e-20 Score=158.09 Aligned_cols=123 Identities=23% Similarity=0.269 Sum_probs=99.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+++|.||.+|+||. +|++|+|.+||..|.+||.|.+|+|+|.++. ..++++|++.++..
T Consensus 429 ~g~~~TGDl-g~~~~~G~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 506 (560)
T PLN02574 429 DGWLRTGDI-AYFDEDGYLYIVDRLKEIIKY-KGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGST 506 (560)
T ss_pred CCCcccceE-EEEECCCeEEEEecchhheEE-CCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCC
Confidence 379999998 999999999999999999998 7999999999999999999999999997653 45788888654310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. + . +++.+.+ ++.|++|++|+.|.++++.+ +|++||++|+.+++.+.+
T Consensus 507 ----------------~-~---~----~~l~~~~-~~~l~~~~~p~~v~~v~~iP------~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 507 ----------------L-S---Q----EAVINYV-AKQVAPYKKVRKVVFVQSIP------KSPAGKILRRELKRSLTN 554 (560)
T ss_pred ----------------C-C---H----HHHHHHH-HHhccCcccCcEEEEeeccC------CCCcchhhHHHHHHHHhh
Confidence 0 0 0 2233333 46689999999999987754 699999999999988754
No 44
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.82 E-value=5.5e-20 Score=157.47 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=100.0
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|+||++++.||.+|+|+. +|.+|+|.+||+++.++|.|.+|+|+|.++. ..++++|++++....
T Consensus 408 g~~~TGD~-~~~d~dG~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~ 485 (534)
T PRK05852 408 GWLRTGDL-GSLSAAGDLSIRGRIKELINR-GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPP 485 (534)
T ss_pred CCcccCce-EEEeCCCcEEEEecchhhEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999998754 357888886542100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+ . +.+.+.+ +..|++|++|+.+.++++.+ +|++||++|+.+++.|..
T Consensus 486 ----------~----------~----~~i~~~~-~~~l~~~~~P~~i~~v~~iP------~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 486 ----------T----------A----EELVQFC-RERLAAFEIPASFQEASGLP------HTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred ----------C----------H----HHHHHHH-HHhcccccCCeEEEEhhhcC------CCCCccccHHHHHHHhcc
Confidence 0 0 2233333 45689999999999987764 699999999999998854
No 45
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.81 E-value=7.8e-20 Score=161.69 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=100.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|+|++.||.||+||+ +|++|+|.+||..+.+||.|.+|+|+|.++. ..++++|++......
T Consensus 365 ~~~~TGDl-~~~~~dG~l~~~GR~dd~ik~-~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~ 442 (705)
T PRK06060 365 GWLDTRDR-VCIDSDGWVTYRCRADDTEVI-GGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATI 442 (705)
T ss_pred CcEECCee-EEECCCceEEEecccCceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCc
Confidence 79999998 999999999999999999997 8999999999999999999999999997643 467888887543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
+.... +.+.+.+ .+.|+.|++|..|.++++.+ +|++||++|+.+++.|.
T Consensus 443 -----------------~~~~~----~~i~~~l-~~~L~~~~~P~~i~~v~~iP------~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 443 -----------------DGSVM----RDLHRGL-LNRLSAFKVPHRFAVVDRLP------RTPNGKLVRGALRKQSP 491 (705)
T ss_pred -----------------ChHHH----HHHHHHH-HHhCCCCcCCcEEEEeecCC------CCcchhhHHHHHHhhcc
Confidence 11111 2333333 46799999999999998765 69999999999998764
No 46
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.81 E-value=1.8e-19 Score=152.55 Aligned_cols=119 Identities=23% Similarity=0.324 Sum_probs=95.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|++++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..++++|.....
T Consensus 360 ~g~~~TGDl-~~~d~~g~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~-- 435 (487)
T PRK07638 360 DGWMTVRDV-GYEDEEGFIYIVGREKNMILF-GGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSAT-- 435 (487)
T ss_pred CCcEecCcc-EeEcCCCeEEEEecCCCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCCC--
Confidence 369999998 999999999999999999997 8999999999999999999999999998754 356666653211
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. +++.+.+ ...+++|++|+.+.++++.+ +|++||++|+.+++.+.+
T Consensus 436 ----------------------~----~~l~~~~-~~~l~~~~~p~~i~~v~~iP------~t~~GKv~r~~L~~~~~~ 481 (487)
T PRK07638 436 ----------------------K----QQLKSFC-LQRLSSFKIPKEWHFVDEIP------YTNSGKIARMEAKSWIEN 481 (487)
T ss_pred ----------------------H----HHHHHHH-HHHhhcccCCcEEEEecccC------CCCcccccHHHHHHHHhc
Confidence 0 2222233 35678999999999987754 699999999999766543
No 47
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=7.4e-20 Score=158.18 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=106.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|.+++.||.+|+|+. +|++|+|.+||..+.++|.|.+|+|+|.++. ..+++++++.++...
T Consensus 430 g~~~TGD~-~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~ 507 (576)
T PRK05620 430 GWLRTGDV-GSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEP 507 (576)
T ss_pred CcEecCce-EEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCc
Confidence 69999998 999999999999999999995 8999999999999999999999999998754 356777776543110
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
..... +++.+.+ +..|++|++|+.|.++++.+ +|++||++|+.+++.++..=
T Consensus 508 -----------------~~~~~----~~l~~~l-~~~L~~~~~P~~i~~v~~~P------~t~~GKv~r~~L~~~~~~~~ 559 (576)
T PRK05620 508 -----------------TRETA----ERLRDQL-RDRLPNWMLPEYWTFVDEID------KTSVGKFDKKDLRQHLADGD 559 (576)
T ss_pred -----------------ccccH----HHHHHHH-HhhCccccCCeEEEEeccCC------CCCcccCcHHHHHHHHhcCC
Confidence 00011 2333333 56799999999999987765 59999999999999988643
Q ss_pred HHHhCCCCCCC
Q psy2420 160 EDLYNPPNPTA 170 (174)
Q Consensus 160 ~~ly~~~~~~~ 170 (174)
.++..-.+++.
T Consensus 560 ~~~~~~~~~~~ 570 (576)
T PRK05620 560 FEIIKLKGPGE 570 (576)
T ss_pred ccEEEecCCCC
Confidence 44444444443
No 48
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.81 E-value=1.5e-19 Score=153.53 Aligned_cols=126 Identities=17% Similarity=0.305 Sum_probs=102.7
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||.|||. |+++++|.+++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..+++++++.+...
T Consensus 394 ~~~~~TGDl-~~~~~~g~l~i~gR~~~~i~~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 471 (523)
T PRK08316 394 GGWFHSGDL-GVMDEEGYITVVDRKKDMIKT-GGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGAT 471 (523)
T ss_pred CCCeeccce-EEEcCCceEEEecccccEEEe-CCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCC
Confidence 369999998 999999999999999999997 8999999999999999999999999997644 34778888754310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
...+.+.+.+ +..+++|++|..+.++++.+ +|++||++|+.+.+.|.+.
T Consensus 472 --------------------~~~~~l~~~~-----~~~l~~~~~p~~i~~v~~~p------~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 472 --------------------VTEDELIAHC-----RARLAGFKVPKRVIFVDELP------RNPSGKILKRELRERYAGA 520 (523)
T ss_pred --------------------CCHHHHHHHH-----HHhcccCCCCcEEEEecCCC------CCCccceeHHHHHHHHHhh
Confidence 0011222333 35689999999999987654 6999999999999999987
Q ss_pred HH
Q psy2420 159 IE 160 (174)
Q Consensus 159 i~ 160 (174)
++
T Consensus 521 ~~ 522 (523)
T PRK08316 521 FT 522 (523)
T ss_pred cc
Confidence 75
No 49
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.80 E-value=3.9e-19 Score=157.68 Aligned_cols=120 Identities=21% Similarity=0.184 Sum_probs=93.9
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCC---cEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKS---YIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~---~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||+|+++||+||+||. +|++|+|.+||+++.+++.+.+++|++.++.. .+++++. ... .
T Consensus 590 ~gw~~TGDl-g~~d~dG~l~i~GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~-~~~-~ 665 (718)
T PRK08043 590 RGWYDTGDI-VRFDEQGFVQIQGRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT-DSE-L 665 (718)
T ss_pred CCeEecCCE-EEEcCCCcEEEEecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc-Ccc-c
Confidence 379999998 999999999999999999997 79999999999999999888888888866542 3444432 110 0
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
+ .+.+.+++++..|+.|++|+.+.++++.+ +|++||++|+.+++.+.
T Consensus 666 ------------------~-------~~~l~~~~~~~~l~~~~vP~~i~~v~~lP------~t~~GKi~r~~L~~~~~ 712 (718)
T PRK08043 666 ------------------T-------REKLQQYAREHGVPELAVPRDIRYLKQLP------LLGSGKPDFVTLKSMVD 712 (718)
T ss_pred ------------------C-------HHHHHHHHHhcCCCcccCCceEEEecccC------cCCCCCcCHHHHHHHHh
Confidence 0 02344555344599999999999998754 69999999999987654
No 50
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.80 E-value=3.2e-19 Score=153.06 Aligned_cols=124 Identities=16% Similarity=0.104 Sum_probs=98.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|++++.||.||+|++ +|++|+|.+||+++.++|.|.+|+|+|.++. ..++++|++.++..
T Consensus 381 g~~~TGD~-~~~~~~g~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~- 457 (529)
T PRK07867 381 GVYWSGDL-AYRDADGYAYFAGRLGDWMRV-DGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAK- 457 (529)
T ss_pred CeEeeccE-EEEeCCCcEEEeccccCeEEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999998753 35777777654310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.... .+.+.+.. +..|++|++|..+.++++.+ +|++||++|+.+++....
T Consensus 458 ---------------~~~~----~l~~~~~~---~~~l~~~~~P~~i~~~~~iP------~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 458 ---------------FDPD----AFAEFLAA---QPDLGPKQWPSYVRVCAELP------RTATFKVLKRQLSAEGVD 507 (529)
T ss_pred ---------------CCHH----HHHHHHHh---hccCCcccCCeEEEEeeccC------CCCCcceeHHHHHHhcCC
Confidence 0011 12222211 24699999999999987765 599999999999886544
No 51
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.80 E-value=4e-19 Score=150.31 Aligned_cols=123 Identities=20% Similarity=0.243 Sum_probs=99.0
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+++|.||.+|+|+. +|++|+|.+||+.|.++|.|.+++|+|.++. ..++++|++.++..
T Consensus 360 ~g~~~TGDl-~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 437 (488)
T PRK09088 360 DGWFRTGDI-ARRDADGFFWVVDRKKDMFIS-GGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAP 437 (488)
T ss_pred CCCeeecce-EEEcCCCcEEEeccccceEEe-CCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCC
Confidence 369999998 999999999999999999996 8999999999999999999999999997643 34667777654210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
... ..+.+.+ +..+++|++|..+.++++.+ +|++||++|+.+++.+..
T Consensus 438 --------------------~~~----~~l~~~~-~~~l~~~~~p~~i~~~~~iP------~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 438 --------------------LDL----ERIRSHL-STRLAKYKVPKHLRLVDALP------RTASGKLQKARLRDALAA 485 (488)
T ss_pred --------------------CCH----HHHHHHH-HhhCcCCCCCCEEEEcccCC------CCCCCceeHHHHHHHHHh
Confidence 001 2233333 45689999999999987654 699999999999988764
No 52
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.80 E-value=3.9e-19 Score=152.56 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=100.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|++++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++++|++.++..
T Consensus 408 ~g~~~TGD~-~~~~~dg~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 485 (539)
T PRK07008 408 DGWFPTGDV-ATIDADGFMQITDRSKDVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAE 485 (539)
T ss_pred CCCcccCce-EEEcCCCcEEEeecccCEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCc
Confidence 479999998 999999999999999999995 8999999999999999999999999997753 35677776544210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
. + . +.+.+++ +..+++|+.|+.+.+++..+ +|++||++|+.+++.+.+.
T Consensus 486 ----------------~-~---~----~~l~~~~-~~~l~~~~~P~~i~~v~~lP------~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 486 ----------------V-T---R----EELLAFY-EGKVAKWWIPDDVVFVDAIP------HTATGKLQKLKLREQFRDY 534 (539)
T ss_pred ----------------c-C---H----HHHHHHH-HhhcccccCCeEEEEecCCC------CCCccceeHHHHHHHHHhh
Confidence 0 0 1 2333333 45689999999999987765 6999999999999888763
No 53
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.80 E-value=3.5e-19 Score=153.57 Aligned_cols=123 Identities=20% Similarity=0.240 Sum_probs=98.1
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|.++|.||.+|+|++ +|++|+|.+||+.|.++|.|.+++|+|.++. ..++++|++.+...
T Consensus 432 ~g~~~TGDl-g~~~~~G~l~i~GR~~d~i~~-~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~ 509 (562)
T PRK05677 432 DGWLKTGDI-ALIQEDGYMRIVDRKKDMILV-SGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGET 509 (562)
T ss_pred CCcccccce-EEECCCCcEEEEecCcCeEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCC
Confidence 369999998 999999999999999999998 7999999999999999999999999997753 35667776543210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. + . +.+.+++ +..+++|++|..|.++++.+ +|++||++|+.+++.+-.
T Consensus 510 --------~---------~---~----~~l~~~~-~~~l~~~~~P~~i~~v~~iP------~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 510 --------L---------T---K----EQVMEHM-RANLTGYKVPKAVEFRDELP------TTNVGKILRRELRDEELK 557 (562)
T ss_pred --------C---------C---H----HHHHHHH-HHhhhhccCCcEEEEeccCC------CCCcccccHHHHHHHHHH
Confidence 0 0 0 2233333 45689999999999988754 699999999999876543
No 54
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.80 E-value=2.6e-19 Score=153.05 Aligned_cols=116 Identities=18% Similarity=0.208 Sum_probs=95.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|+|++.||.+|+|+. +|++|+|.+||+.|.++|.|.+|+|+|.++. ..++|+|+++.....
T Consensus 408 g~~~TGDl-~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~~ 485 (527)
T TIGR02275 408 GFYYTGDL-VRLTPEGYIVVVGRAKDQINR-GGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPALK 485 (527)
T ss_pred CCEEcCce-EEEcCCccEEEEecccceeec-CCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999998754 457888887543110
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
. .++.++++..++++|++|..+.++++.+ +|++||++|+.+
T Consensus 486 ---------------------~----~~l~~~l~~~~l~~~~~P~~i~~v~~iP------~t~sGKv~r~~L 526 (527)
T TIGR02275 486 ---------------------A----AQLRRFLRERGLAEYKLPDRVEFIDSLP------LTAVGKIDKKAL 526 (527)
T ss_pred ---------------------H----HHHHHHHHhCCCccccCCCEEEEeccCC------CCCccceeHHhc
Confidence 0 2344444334599999999999987654 699999999876
No 55
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.80 E-value=3.3e-19 Score=151.05 Aligned_cols=124 Identities=20% Similarity=0.251 Sum_probs=97.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeC--C-C-CcEEEEEEcChHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGES--L-K-SYIVAIVVPDVDVV 78 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~--~-~-~~~~a~v~~~~~~~ 78 (174)
+||+|||. |++|++ +|++.||.+|+|++ +|++|+|.+||+.+.++|.|.+|+|++.. . . ..++++|++.....
T Consensus 374 ~~~~TGDl-g~~~~~-~l~i~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~ 450 (502)
T TIGR01734 374 PAYRTGDA-GTITDG-QLFYQGRLDFQIKL-HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDF 450 (502)
T ss_pred EEEECCCE-EEEECC-EEEEeccccCeEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEeccccc
Confidence 59999998 999976 99999999999997 89999999999999999999999999842 1 1 46778888765321
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
. ....+.+.+...+ +..+++|++|+.++++++.+ +|++||++|+.+++.+.
T Consensus 451 ~----------------~~~~~~~~i~~~~-----~~~l~~~~~P~~~~~v~~lP------~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 451 E----------------KEFQLTKAIKKEL-----KKSLPAYMIPRKFIYRDQLP------LTANGKIDRKALAEEVN 501 (502)
T ss_pred c----------------cchhhHHHHHHHH-----hhhChhhcCCcEEEEccccC------CCCCCcccHHHHHHhhc
Confidence 1 0112223333444 56789999999999987665 69999999999998753
No 56
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.79 E-value=3.7e-19 Score=150.37 Aligned_cols=120 Identities=23% Similarity=0.273 Sum_probs=98.1
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|++++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++++|++++....
T Consensus 371 g~~~TGDl-~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~ 448 (496)
T PRK06839 371 GWLCTGDL-ARVDEDGFVYIVGRKKEMIIS-GGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVL 448 (496)
T ss_pred CCeeecce-EEEcCCCcEEEeccccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999997643 358888887653100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
..+.+++.+ ...|++|++|..|+++++.+ +|++||+.|+.+++.-
T Consensus 449 --------------------~~~~l~~~~-----~~~l~~~~~P~~~~~v~~~P------~t~~GKi~r~~l~~~~ 493 (496)
T PRK06839 449 --------------------IEKDVIEHC-----RLFLAKYKIPKEIVFLKELP------KNATGKIQKAQLVNQL 493 (496)
T ss_pred --------------------CHHHHHHHH-----HhhCcCCCCCcEEEEeccCC------CCccccccHHHHHHHh
Confidence 001222333 45689999999999987765 5999999999998653
No 57
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.79 E-value=3.7e-19 Score=153.01 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=97.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|+++|.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..+.+++++......
T Consensus 400 ~~~~TGD~-~~~~~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~ 477 (542)
T PRK06155 400 LWFHTGDR-VVRDADGWFRFVDRIKDAIRR-RGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTAL 477 (542)
T ss_pred CcEeccce-EEEcCCceEEEEecCCCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999997753 456777776532100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
+ . .++.+++ ...+++|++|..|.++++.+ +|++||++|+.+++++
T Consensus 478 -----------------~---~----~~~~~~~-~~~l~~~~~P~~i~~~~~iP------~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 478 -----------------E---P----VALVRHC-EPRLAYFAVPRYVEFVAALP------KTENGKVQKFVLREQG 522 (542)
T ss_pred -----------------C---H----HHHHHHH-HhhCcCccCCcEEEEeccCC------CCcccceeHHHHHhhc
Confidence 0 0 2333333 46789999999999987654 6999999999998865
No 58
>PRK09274 peptide synthase; Provisional
Probab=99.79 E-value=7.2e-19 Score=151.02 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=97.6
Q ss_pred cccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC--CcEEEEEEcChHHHHHH
Q psy2420 4 FLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK--SYIVAIVVPDVDVVKCK 81 (174)
Q Consensus 4 ~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~--~~~~a~v~~~~~~~~~~ 81 (174)
||+|||. +++|++|+|++.||.||+|+. +|++|+|.+||+.|.+||.|.+|+|+|.++. ..++++|++.+...
T Consensus 421 w~~TGDl-g~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~~v~~~~~~~--- 495 (552)
T PRK09274 421 WHRMGDL-GYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGVPGAQRPVLCVELEPGVA--- 495 (552)
T ss_pred EEEcCCE-EEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCCCCCceEEEEEEccCccc---
Confidence 9999998 999999999999999999997 8999999999999999999999999997654 35777777654321
Q ss_pred HHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccC--ccccccHHHHHHHHHHHH
Q psy2420 82 ALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLT--PNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T--~tgKv~R~~i~~~y~~~i 159 (174)
....++. +.+++.+ ...+.++.|+++.++++.+ +| ++||++|+.+++.+...+
T Consensus 496 -------------~~~~~l~----~~l~~~l--~~~~~~~~~~~~~~~~~lP------~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 496 -------------CSKSALY----QELRALA--AAHPHTAGIERFLIHPSFP------VDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred -------------cchHHHh----hhhHHHH--HhcCCCcceeEEeccCCCC------ccccccccccHHHHHHHHHHhh
Confidence 0012233 3444443 2345667888888887654 57 799999999998876543
No 59
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.79 E-value=4.8e-19 Score=152.19 Aligned_cols=123 Identities=17% Similarity=0.201 Sum_probs=99.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|++++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..++++|++++...
T Consensus 419 g~~~TGD~-~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~- 495 (547)
T PRK13295 419 GWFDTGDL-ARIDADGYIRISGRSKDVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQS- 495 (547)
T ss_pred CCeecceE-EEEcCCceEEEEeccCCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999997643 35888888764310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.. . +++.+.+.+..+++|++|+++.++++.+ +|++||++|+.+++.+.+
T Consensus 496 ------------------~~-~----~~l~~~~~~~~l~~~~~P~~i~~v~~lP------~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 496 ------------------LD-F----EEMVEFLKAQKVAKQYIPERLVVRDALP------RTPSGKIQKFRLREMLRG 544 (547)
T ss_pred ------------------CC-H----HHHHHHHHhccCccccCCcEEEEeccCC------CCCCccccHHHHHHHHhc
Confidence 00 0 2333333234799999999999987655 699999999999876543
No 60
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.79 E-value=3.2e-19 Score=152.82 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=99.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|+|++.||.||+|+. +|++|+|.+||+.+.++|.|.+++|+|.++. ..++|+++++++...
T Consensus 416 ~~~~TGDl-~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~ 493 (546)
T PRK08314 416 RFFRTGDL-GRMDEEGYFFITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARG 493 (546)
T ss_pred ceEecCCE-EEEcCCCcEEEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCC
Confidence 49999998 999999999999999999997 7999999999999999999999999997653 467888887653210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
. . . . +.+.+++ +..|++|++|..++++++.+ +|++||++|+.+++..
T Consensus 494 ~--------------~-~---~----~~l~~~~-~~~l~~~~~P~~~~~v~~iP------~t~~GKv~r~~L~~~~ 540 (546)
T PRK08314 494 K--------------T-T---E----EEIIAWA-REHMAAYKYPRIVEFVDSLP------KSGSGKILWRQLQEQE 540 (546)
T ss_pred C--------------C-C---H----HHHHHHH-HHhcccCCCCcEEEEecCCC------CCCccceeHHHHHHHH
Confidence 0 0 0 0 2344444 46799999999999998764 6999999999997653
No 61
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.79 E-value=5.3e-19 Score=149.84 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=100.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|++++.||.+|+||. +|++|+|.+||+++.+++.|.+|+|+|.++. ..+++++++.+...
T Consensus 377 ~~~~TGDl-~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~- 453 (504)
T PRK07514 377 GFFITGDL-GKIDERGYVHIVGRGKDLIIS-GGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAA- 453 (504)
T ss_pred CCeeecce-EEEcCCccEEEeccccceEEe-CCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999997653 35788888754310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
.. .+.+.+.+ +..+++|++|..++++++.+ +|++||++|+.+++.|++.+
T Consensus 454 ---------------~~----~~~l~~~~-----~~~l~~~~~p~~i~~v~~~p------~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 454 ---------------LD----EAAILAAL-----KGRLARFKQPKRVFFVDELP------RNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred ---------------CC----HHHHHHHH-----HhhcccCCCCcEEEEeccCC------CCCCcceeHHHHHHHHHhhc
Confidence 00 11222333 45689999999999987654 69999999999999887753
No 62
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.79 E-value=5.3e-19 Score=151.01 Aligned_cols=123 Identities=13% Similarity=0.153 Sum_probs=98.7
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. ++++++|++++.||.+|+|+. +|++|+|.+||..+.++|.|.+|+|+|.++. ..+++++++.+...
T Consensus 393 ~~~~~TGDl-~~~~~~g~l~~~GR~dd~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 470 (528)
T PRK07470 393 DGWFRTGDL-GHLDARGFLYITGRASDMYIS-GGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAP 470 (528)
T ss_pred CCcEeccee-EEEccCCeEEEeCCccceEEe-CCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCC
Confidence 369999998 999999999999999999996 8999999999999999999999999998754 24677777654310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
... +.+.+.+ ...|++|++|..+.++++.+ +|++||++|+.+++.|.+
T Consensus 471 ----------------~~~----~~~~~~l-----~~~l~~~~~P~~~~~~~~iP------~t~~GKi~r~~l~~~~~~ 518 (528)
T PRK07470 471 ----------------VDE----AELLAWL-----DGKVARYKLPKRFFFWDALP------KSGYGKITKKMVREELEE 518 (528)
T ss_pred ----------------CCH----HHHHHHH-----HHhhhcCCCCcEEEEeccCC------CCCcccccHHHHHHHHHh
Confidence 000 1222333 35689999999999887654 699999999999887765
No 63
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.79 E-value=3.8e-19 Score=151.00 Aligned_cols=120 Identities=16% Similarity=0.231 Sum_probs=96.0
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+|++|||. +++|++|++++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..+++++++.+...
T Consensus 379 ~w~~tGDl-~~~~~dg~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~- 455 (501)
T PRK13390 379 FWTTVGDL-GSVDEDGYLYLADRKSFMIIS-GGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIR- 455 (501)
T ss_pred ceEEcCce-EEECCCCeEEEeeccccceeE-CCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCC-
Confidence 59999998 999999999999999999997 8999999999999999999999999998753 46778777653210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLK 152 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~ 152 (174)
..+... +++.+.+ ...|+.|++|..+.++++.+ +|++||++|+.++
T Consensus 456 ----------------~~~~~~----~~l~~~~-~~~l~~~~~P~~~~~~~~iP------~t~~GKi~r~~L~ 501 (501)
T PRK13390 456 ----------------GSDELA----RELIDYT-RSRIAHYKAPRSVEFVDELP------RTPTGKLVKGLLR 501 (501)
T ss_pred ----------------cchhhH----HHHHHHH-HHhcccCCCCcEEEEeccCC------CCCccceehhhcC
Confidence 001112 2343444 46689999999999987755 6999999998863
No 64
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.79 E-value=3.9e-19 Score=152.60 Aligned_cols=119 Identities=20% Similarity=0.269 Sum_probs=96.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+++|.||.+|+||. +|++|+|.+||..+.++|.|.+|+|+|.++. ..++++|++.++..
T Consensus 415 ~g~~~TGDl-~~~~~~g~l~~~GR~dd~ik~-~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~ 492 (537)
T PRK13382 415 DGFMASGDV-GYLDENGRLFVVGRDDEMIVS-GGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGAS 492 (537)
T ss_pred CCCEeeCce-EEEeCCCcEEEeccccceeEE-CCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCC
Confidence 379999998 999999999999999999996 8999999999999999999999999998754 35788888754310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
... +++.+.+ +..|+.|++|..+.++.+.+ +|++||++|+.+++
T Consensus 493 --------------------~~~----~~l~~~l-~~~l~~~~~P~~i~~v~~lP------~t~~gK~~r~~L~~ 536 (537)
T PRK13382 493 --------------------ATP----ETLKQHV-RDNLANYKVPRDIVVLDELP------RGATGKILRRELQA 536 (537)
T ss_pred --------------------CCH----HHHHHHH-HHhccCCCCCcEEEEeccCC------CCCCCCCcHHhhCC
Confidence 001 2233333 46789999999999987654 69999999998753
No 65
>PLN02246 4-coumarate--CoA ligase
Probab=99.79 E-value=6.6e-19 Score=150.92 Aligned_cols=122 Identities=16% Similarity=0.255 Sum_probs=98.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. ++++++|.+++.||.+|+||. +|++|+|.+||+++.++|.|.+|+|++.++. ..+++++++.++..
T Consensus 411 ~~~~~TGD~-~~~~~~g~l~~~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 488 (537)
T PLN02246 411 DGWLHTGDI-GYIDDDDELFIVDRLKELIKY-KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSE 488 (537)
T ss_pred CCCeeecce-EEEeCCCeEEEEecccceEEE-CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCC
Confidence 369999998 999999999999999999997 7999999999999999999999999997643 45778887654310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
. . . +++.+.+ +..+++|+.|.+|.++++.+ +|++||++|+.+++.+.
T Consensus 489 ---------------~--~---~----~~l~~~l-~~~l~~~~~p~~i~~~~~~P------~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 489 ---------------I--T---E----DEIKQFV-AKQVVFYKRIHKVFFVDSIP------KAPSGKILRKDLRAKLA 535 (537)
T ss_pred ---------------C--C---H----HHHHHHH-HhhCcCccccceEEEeccCC------CCCcchhhHHHHHHHHh
Confidence 0 0 1 2233333 46789999999999887654 69999999999988764
No 66
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1.6e-19 Score=146.81 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=106.0
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
++||+|||. .+.|+||+|.+.||.||+|+- +||+|..++||+.|..||.|.+|.+++-++. ...||+|++.....
T Consensus 413 ~GFYrsGD~-V~~~~dGyl~V~GR~KDQINR-gGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~ 490 (542)
T COG1021 413 DGFYRSGDL-VRRDPDGYLVVEGRVKDQINR-GGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPL 490 (542)
T ss_pred CCceecCce-eEecCCceEEEEeeehhhhcc-ccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCC
Confidence 489999998 999999999999999999995 9999999999999999999999999998864 56899999865432
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.. .+++++....+++.|++|.+|.+++..+ +|+-|||+++.++++.+.
T Consensus 491 ~~-------------------------~qlr~~L~~~GlAa~K~PDrie~v~~~P------~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 491 RA-------------------------AQLRRFLRERGLAAFKLPDRIEFVDSLP------LTAVGKIDKKALRRRLAS 538 (542)
T ss_pred CH-------------------------HHHHHHHHHcchhhhcCCcceeecccCC------CcccccccHHHHHHHhhh
Confidence 11 3455555568899999999999987655 699999999999988765
No 67
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.79 E-value=5.3e-19 Score=151.69 Aligned_cols=124 Identities=18% Similarity=0.247 Sum_probs=100.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|++++.||.+|+|+. +|++|+|.+||+.+..+|.|.+|+|+|.++. ..+++++++.++..
T Consensus 428 ~~~~TGDl-~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 504 (558)
T PRK12583 428 GWMHTGDL-ATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHA- 504 (558)
T ss_pred CCeeccce-EEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCC-
Confidence 69999998 999999999999999999996 8999999999999999999999999997643 45777777654210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
... .++..++ +..|++|++|.++.++++.+ +|++||++|+.+++.+.+.+
T Consensus 505 -------------------~~~----~~i~~~~-~~~L~~~~~P~~i~~v~~lP------~t~sGK~~r~~L~~~~~~~~ 554 (558)
T PRK12583 505 -------------------ASE----EELREFC-KARIAHFKVPRYFRFVDEFP------MTVTGKVQKFRMREISIEEL 554 (558)
T ss_pred -------------------CCH----HHHHHHH-HhhcccCcCCcEEEEeccCC------CCCCCCccHHHHHHHHHhhc
Confidence 001 2333333 46789999999999987654 69999999999999887654
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.79 E-value=1.2e-18 Score=149.52 Aligned_cols=122 Identities=17% Similarity=0.225 Sum_probs=100.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. +++|++|+|++.||.+|+|+. +|++|+|.+||..|.++|.|.+++|++.++. ..++++|++... ..
T Consensus 409 ~~~~TGDl-~~~d~~G~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-~~ 485 (536)
T PRK10946 409 GFYCSGDL-VSIDPDGYITVVGREKDQINR-GGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP-LK 485 (536)
T ss_pred CceecCce-EEECCCCcEEEeccccceeec-CCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC-CC
Confidence 69999998 999999999999999999996 8999999999999999999999999998754 357888886542 10
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
. .++.+++++..+++|++|..+.++++.+ +|++||++|+.+++.++..
T Consensus 486 -----------------~--------~~l~~~~~~~~l~~~~~P~~~~~~~~iP------~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 486 -----------------A--------VQLRRFLREQGIAEFKLPDRVECVDSLP------LTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred -----------------H--------HHHHHHHHhCCccccccCcEEEEeccCC------CCCCCcccHHHHHHHHHhh
Confidence 0 2344444233599999999999987654 6999999999999887664
No 69
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.79 E-value=7.7e-19 Score=151.57 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=100.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|+|++.||.+|+|+. +|++|+|.+||+++.+++.|.+|+|+|.++. ..++++++++++...
T Consensus 445 g~~~TGD~-~~~~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~ 522 (573)
T PRK05605 445 GWFRTGDV-VVMEEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAAL 522 (573)
T ss_pred CCcccCCE-EEEcCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCC
Confidence 59999998 999999999999999999997 8999999999999999999999999997643 567888877543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
+ . .++.+.+ +..|+.|++|..+.++++.+ +|.+||++|+.+++.+.+.+
T Consensus 523 -----------------~---~----~~l~~~~-~~~l~~~~~p~~i~~~~~iP------~t~~GKi~r~~L~~~~~~~~ 571 (573)
T PRK05605 523 -----------------D---P----EGLRAYC-REHLTRYKVPRRFYHVDELP------RDQLGKVRRREVREELLEKL 571 (573)
T ss_pred -----------------C---H----HHHHHHH-HHhCccccCCcEEEEeccCC------CCCcccccHHHHHHHHHHHh
Confidence 0 1 2233333 46689999999999887654 69999999999998886654
No 70
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.78 E-value=1.2e-18 Score=149.79 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=96.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|++++.||.+|+||+ +|++|+|.+||+++.++|.|.+|+|+|.++. ..+++++++.++..
T Consensus 380 g~~~TGD~-~~~~~dg~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~- 456 (540)
T PRK13388 380 GMYWSGDL-AYRDADGWIYFAGRTADWMRV-DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGAT- 456 (540)
T ss_pred Cceeccce-EEEcCCCcEEEeccCCceEEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCc-
Confidence 69999998 999999999999999999997 8999999999999999999999999997753 34566666543310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
.. .+.+.+.+.. +..|++|++|..+.++++.+ +|++||++|+.+++..
T Consensus 457 ---------------~~----~~~l~~~l~~---~~~l~~~~~P~~~~~v~~iP------~t~~GKv~R~~L~~~~ 504 (540)
T PRK13388 457 ---------------FD----PDAFAAFLAA---QPDLGTKAWPRYVRIAADLP------STATNKVLKRELIAQG 504 (540)
T ss_pred ---------------CC----HHHHHHHHHh---hccCCcccCCcEEEEeccCC------CCCcceeeHHhHHHhc
Confidence 00 0122233321 24699999999999987765 6999999999998754
No 71
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.78 E-value=8.7e-19 Score=148.42 Aligned_cols=120 Identities=20% Similarity=0.245 Sum_probs=97.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|++++.||.+|+||+ +|++|+|.+||+.+.++|.|.+++|++.++. ..+++++++.+...
T Consensus 373 ~~~~TGDl-~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 449 (497)
T PRK06145 373 DWFRSGDV-GYLDEEGFLYLTDRKKDMIIS-GGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGAT- 449 (497)
T ss_pred CCeeccce-EEEcCCCcEEEeccccceEEe-CCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999997643 45788888754210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
. . . .++.+.+ +..|++|+.|..+.++++.+ +|++||++|+.+++++
T Consensus 450 ---------------~-~---~----~~l~~~~-~~~l~~~~~p~~i~~v~~iP------~t~~GKi~r~~l~~~~ 495 (497)
T PRK06145 450 ---------------L-T---L----EALDRHC-RQRLASFKVPRQLKVRDELP------RNPSGKVLKRVLRDEL 495 (497)
T ss_pred ---------------C-C---H----HHHHHHH-HHhhhcCCCCCEEEEeccCC------CCCcccccHHHHHHHh
Confidence 0 0 1 2233333 45689999999999987754 6999999999998765
No 72
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.78 E-value=1.2e-18 Score=150.11 Aligned_cols=122 Identities=18% Similarity=0.265 Sum_probs=98.0
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. ++++++|+++|+||++|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++++|++.+...
T Consensus 441 dg~~~TGDl-~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 518 (567)
T PRK06178 441 DGWLHTGDI-GKIDEQGFLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGAD 518 (567)
T ss_pred CCceeecce-EEEecCCeEEEEecccccEEE-CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCc
Confidence 369999997 999999999999999999997 8999999999999999999999999997643 46788888754310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. + . +++.+.+ ++.+++|++|. ++++++.+ +|++||++|+.+++.+++
T Consensus 519 ~-----------------~---~----~~l~~~~-~~~l~~~~~p~-i~~v~~iP------~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 519 L-----------------T---A----AALQAWC-RENMAVYKVPE-IRIVDALP------MTATGKVRKQDLQALAEE 565 (567)
T ss_pred C-----------------C---H----HHHHHHH-HhcCcccCCce-EEEeccCC------CCCccceeHHHHHHHHHh
Confidence 0 0 0 2333333 46789999996 77776544 699999999999988765
No 73
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.78 E-value=4e-19 Score=152.13 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=91.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. ++++ +|+|+|+||.||+||+ +|++|+|.+||.+|.+||.|.+|+|++.++. ..++++|++.....
T Consensus 395 ~~~~~TGDl-~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 471 (525)
T PRK05851 395 DDWFPTGDL-GYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGP 471 (525)
T ss_pred CCceeccce-EEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCc
Confidence 379999998 9887 7999999999999998 8999999999999999999999999886533 24555555321100
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEec--CCCCcCCCccCccccccHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHP--DPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~--~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
....+.+.+.+.+... + +++|+.+.+++ +. |+|++||++|+.+++.++
T Consensus 472 -----------------~~~~~~~~~~~~l~~~-----l--~~~P~~~~~v~~~~l------P~t~~GKi~r~~L~~~~~ 521 (525)
T PRK05851 472 -----------------DEAGARSEVVQRVASE-----C--GVVPSDVVFVAPGSL------PRTSSGKLRRLAVKRSLE 521 (525)
T ss_pred -----------------chHHHHHHHHHHHHHH-----h--CCCccEEEEECCCCc------CcCcchHHHHHHHHHHHH
Confidence 0123334444444332 1 26888999887 33 369999999999988765
Q ss_pred H
Q psy2420 157 P 157 (174)
Q Consensus 157 ~ 157 (174)
.
T Consensus 522 ~ 522 (525)
T PRK05851 522 A 522 (525)
T ss_pred h
Confidence 4
No 74
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.78 E-value=3.5e-18 Score=145.03 Aligned_cols=127 Identities=19% Similarity=0.251 Sum_probs=103.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|.+++.||.+|+|+. +|++|+|.+||..+.++|.|.+|+|++.++. ..++++|++.....
T Consensus 369 ~~~~TGD~-~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 445 (502)
T PRK08276 369 GWVTVGDV-GYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGAD- 445 (502)
T ss_pred Cceeecce-EEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCC-
Confidence 79999998 999999999999999999997 8999999999999999999999999997653 36888888754310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
..+.+.+.+...+ +.++++|+.|..+.++++.+ +|++||+.|+.+++.|-+..
T Consensus 446 ----------------~~~~~~~~i~~~~-----~~~l~~~~~p~~i~~~~~lP------~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 446 ----------------AGDALAAELIAWL-----RGRLAHYKCPRSIDFEDELP------RTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred ----------------CChhhHHHHHHHH-----HhhccCCCCCcEEEEecCCC------CCcccchhHHHHHHHHHhhh
Confidence 0122233333443 46789999999999987765 59999999999999976643
No 75
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.78 E-value=5.4e-19 Score=154.46 Aligned_cols=123 Identities=14% Similarity=0.202 Sum_probs=91.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhc-Ccccce--EEEEeeCC----------------
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSK-SLYVHQ--IFVYGESL---------------- 63 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~-~~~V~~--~~V~g~~~---------------- 63 (174)
+||+|||. |+++ +|+|+|+||.||+||+ +|++|+|.+||.+|.+ ||.|.+ |+|+|.++
T Consensus 464 gw~~TGDl-g~~~-dG~l~i~GR~~d~Ik~-~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~ 540 (631)
T PRK07769 464 LWVRTGDY-GVYF-DGELYITGRVKDLVII-DGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLK 540 (631)
T ss_pred Ceeecccc-ccEE-CCEEEEEcccccEEEE-CCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccc
Confidence 79999998 9995 9999999999999997 8999999999999985 899998 89998775
Q ss_pred ------CCcEEEEEEcChHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCC-ce-eeeeEEEecC-CCC
Q psy2420 64 ------KSYIVAIVVPDVDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRN-FE-QVKDIYLHPD-PFS 134 (174)
Q Consensus 64 ------~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~-~~-~p~~v~~~~~-~~~ 134 (174)
...++|+|++.+.... ....++.+++.+.+ +. |+ .|+.+.+++. .+
T Consensus 541 ~~~~~~ge~~~a~v~~~~~~~~---------------~~~~~l~~~~~~~l---------~~~~~~~p~~~~~v~~~~l- 595 (631)
T PRK07769 541 FDPEDTSEQLVIVAERAPGAHK---------------LDPQPIADDIRAAI---------AVRHGVTVRDVLLVPAGSI- 595 (631)
T ss_pred cccCCCCccEEEEEEecCcccc---------------ccHHHHHHHHHHHH---------HHHcCCCccEEEEECCCcc-
Confidence 1346777776543100 01133333443333 42 44 4778888763 23
Q ss_pred cCCCccCccccccHHHHHHHHHH
Q psy2420 135 VQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 135 ~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
|+|++||++|+.+++.|..
T Consensus 596 ----P~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 596 ----PRTSSGKIARRACRAAYLD 614 (631)
T ss_pred ----ccCCCcHHHHHHHHHHHHc
Confidence 3799999999999988764
No 76
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.78 E-value=8.6e-19 Score=150.24 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=95.9
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. +++|++|+|+++||.+|+|+. +|++|+|.+||.++.++|.|.+|+|+|.++. ..++++|++.+....
T Consensus 417 ~~~~TGD~-~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 494 (538)
T TIGR03208 417 GWFDTGDL-AFQDAEGYIRINGRSKDVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTL 494 (538)
T ss_pred Cceeccce-EEECCCCcEEEEeccCceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999998754 458888887543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLK 152 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~ 152 (174)
+ . ..+..+++...++.|++|.++.++++.+ +|++||++|+.++
T Consensus 495 -----------------~---~----~~l~~~~~~~~l~~~~~P~~i~~v~~iP------~t~~gKv~r~~L~ 537 (538)
T TIGR03208 495 -----------------D---F----AAMVAFLKAQKVALQYIPERLEVVDALP------ATPAGKIQKFRLR 537 (538)
T ss_pred -----------------C---H----HHHHHHHHhcchhhccCCcEEEEeccCC------CCCccccchHhhc
Confidence 0 0 2233333224688999999999987765 6999999999875
No 77
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.78 E-value=1.2e-18 Score=149.74 Aligned_cols=124 Identities=17% Similarity=0.195 Sum_probs=100.2
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. ++++++|++++.||.+|+|+. +|++|+|.+||.++.++|.|.+|+|+|.++. ..++++|++.+...
T Consensus 416 ~g~~~TGD~-~~~~~dG~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 493 (546)
T PLN02330 416 DGWLHTGDI-GYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAK 493 (546)
T ss_pred CCceecccE-EEEeCCCcEEEEechHHhhhc-CCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCC
Confidence 379999998 999999999999999999997 7999999999999999999999999997643 46788887654310
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
. + .+.+.+.+ +..|++|+.|+.+.++++.+ +|++||++|+.+++.+...
T Consensus 494 ~-----------------~---~~~l~~~~-----~~~l~~~~~p~~~~~v~~iP------~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 494 E-----------------S---EEDILNFV-----AANVAHYKKVRVVQFVDSIP------KSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred C-----------------C---HHHHHHHH-----HHhcccccCceEEEEeccCC------CCCCcceeHHHHHHHHHhh
Confidence 0 0 11222333 45689999999999987754 5999999999999887653
No 78
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.78 E-value=1.7e-18 Score=146.44 Aligned_cols=124 Identities=23% Similarity=0.273 Sum_probs=99.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++ ++|++++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..+++++++.+....
T Consensus 376 ~~~~tGD~-~~~-~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 452 (503)
T PRK04813 376 PAYHTGDA-GYL-EDGLLFYQGRIDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFE 452 (503)
T ss_pred eeEECCce-EEe-eCCeEEEeccccceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEecccccc
Confidence 49999998 999 99999999999999998 8999999999999999999999999986532 467888887653111
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
....+.+.+.+.+ ...+++|++|+.+.++++.+ +|++||++|+.+++.++
T Consensus 453 ----------------~~~~~~~~l~~~~-----~~~l~~~~~P~~i~~~~~~P------~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 453 ----------------REFELTKAIKKEL-----KERLMEYMIPRKFIYRDSLP------LTPNGKIDRKALIEEVN 502 (503)
T ss_pred ----------------ccchhHHHHHHHH-----HhhCccccCCeEEEEeccCC------CCCCCCCcHHHHHHHhc
Confidence 0122333344444 46689999999999987654 69999999999998775
No 79
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.77 E-value=3.1e-18 Score=145.87 Aligned_cols=124 Identities=19% Similarity=0.231 Sum_probs=100.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+|++|||. ++++++|.+++.||.+|+++. +|++|+|.+||+++.++|.|.+|+|+|.++. ..+++++++.....
T Consensus 382 ~w~~TGD~-g~~~~~g~l~~~gR~~~~i~~-~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~- 458 (511)
T PRK13391 382 TWSTVGDI-GYVDEDGYLYLTDRAAFMIIS-GGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVD- 458 (511)
T ss_pred CEEecCCE-EEECCCccEEEeccCCCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCC-
Confidence 79999998 999999999999999999996 8999999999999999999999999997643 35777777654210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
.++.+. +++.+++ +..+++|+.|..|..+++.+ +|++||++|+.+++.|.
T Consensus 459 ----------------~~~~~~----~~l~~~~-~~~l~~~~~P~~i~~~~~~P------~t~~gKv~r~~l~~~~~ 508 (511)
T PRK13391 459 ----------------PGPALA----AELIAFC-RQRLSRQKCPRSIDFEDELP------RLPTGKLYKRLLRDRYW 508 (511)
T ss_pred ----------------cccchH----HHHHHHH-HhhcccCcCCcEEEEeecCC------CCCccceeHHHHHHHhh
Confidence 012222 3344444 56799999999999987754 69999999999998875
No 80
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.77 E-value=1.8e-18 Score=147.54 Aligned_cols=122 Identities=20% Similarity=0.236 Sum_probs=99.2
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|.+++.||.+++|++ +|++|+|.+||..+.++|.|.+++|+|.++. ..+++++++.++...
T Consensus 393 g~~~TGDl-~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 470 (524)
T PRK06188 393 GWLHTGDV-AREDEDGFYYIVDRKKDMIVT-GGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAV 470 (524)
T ss_pred Cceeecce-EEEcCCccEEEEeccccceec-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCC
Confidence 69999998 999999999999999999997 8999999999999999999999999997643 367788887543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. . +.+.+++ ...+++|++|..|+++++.+ +|++||++|..+++.|.+
T Consensus 471 ----------------~----~----~~l~~~~-~~~l~~~~~p~~i~~v~~~P------~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 471 ----------------D----A----AELQAHV-KERKGSVHAPKQVDFVDSLP------LTALGKPDKKALRARYWE 517 (524)
T ss_pred ----------------C----H----HHHHHHH-HHhcccCCCCcEEEEecCCC------CCccccccHHHHHHHHHh
Confidence 0 1 2233333 45689999999999987654 699999999999988743
No 81
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.77 E-value=2e-18 Score=145.76 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=93.9
Q ss_pred CcccccCCceeeccCCcEEEEccC-cCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRK-RHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~-~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
+||+|||. +++++||++++.||+ +++++. +|++|+|.+||+.+.++|.|.+++|+|.++. ..++++|++....
T Consensus 350 ~~~~TGDl-g~~~~dg~l~~~GR~~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~- 426 (471)
T PRK07787 350 GWFRTGDV-AVVDPDGMHRIVGRESTDLIKS-GGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDV- 426 (471)
T ss_pred CceecCce-EEEcCCCCEEEeCCCCceeEee-CCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCCC-
Confidence 69999998 999999999999996 789996 8999999999999999999999999998753 4678888863210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
+ . +++.+.+ +..+++|++|..+.++++.+ +|++||++|+.+++
T Consensus 427 ------------------~---~----~~l~~~l-~~~l~~~~~P~~i~~~~~iP------~~~~GKi~r~~L~~ 469 (471)
T PRK07787 427 ------------------A---A----DELIDFV-AQQLSVHKRPREVRFVDALP------RNAMGKVLKKQLLS 469 (471)
T ss_pred ------------------C---H----HHHHHHH-HhhcccccCCcEEEEeccCC------CCCCccccHHHhcc
Confidence 0 0 1223333 46689999999999987654 69999999998864
No 82
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.77 E-value=2e-18 Score=148.20 Aligned_cols=122 Identities=18% Similarity=0.214 Sum_probs=99.0
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|++++.||.+|+|+. +|++|+|.+||..+.++|.|.+|+|+|.++. ..+.++|++.++...
T Consensus 410 ~~~~TGDl-~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 487 (542)
T PRK06018 410 GFFDTGDV-ATIDAYGYMRITDRSKDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETA 487 (542)
T ss_pred cEEEcCCE-EEEcCCccEEEEecCCCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCC
Confidence 69999998 999999999999999999996 8999999999999999999999999997643 357777776543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+ . +.+.+.+ +..++.|++|+.+.++++.+ +|++||++|+.+++.|.+
T Consensus 488 -----------------~---~----~~l~~~~-~~~l~~~~~P~~i~~v~~iP------~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 488 -----------------T---R----EEILKYM-DGKIAKWWMPDDVAFVDAIP------HTATGKILKTALREQFKD 534 (542)
T ss_pred -----------------C---H----HHHHHHH-HhhCccccCCcEEEEeccCC------CCCcchhhHHHHHHHHhc
Confidence 0 0 1233333 45689999999999987755 699999999999988765
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.77 E-value=3.3e-18 Score=158.05 Aligned_cols=123 Identities=14% Similarity=0.096 Sum_probs=97.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|+||++++.||.||+||. +|++|+|.+||+.+.+++.|.+|+|++.++. ..+++++. ..+.
T Consensus 1009 ~g~~~TGDl-~~~d~dG~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~-~~~~- 1084 (1140)
T PRK06814 1009 DGWYDTGDI-VTIDEEGFITIKGRAKRFAKI-AGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT-ASDA- 1084 (1140)
T ss_pred CCeEecCCE-EEECCCCeEEEEecccCeeee-CCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc-CCCc-
Confidence 379999998 999999999999999999997 8999999999999999999999999997654 23444432 1110
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
+ .+++.+++++..+++|++|.++.++++.+ +|++||++|+++++.+++.
T Consensus 1085 ------------------~-------~~~l~~~~~~~~l~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1085 ------------------T-------RAAFLAHAKAAGASELMVPAEIITIDEIP------LLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred ------------------C-------HHHHHHHHHHcCCCcccCCcEEEEecCcC------CCCCCCCcHHHHHHHHHHh
Confidence 0 02344444345699999999999988765 5999999999998877664
Q ss_pred H
Q psy2420 159 I 159 (174)
Q Consensus 159 i 159 (174)
+
T Consensus 1134 ~ 1134 (1140)
T PRK06814 1134 A 1134 (1140)
T ss_pred h
Confidence 3
No 84
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.77 E-value=2.7e-18 Score=147.05 Aligned_cols=124 Identities=18% Similarity=0.216 Sum_probs=100.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCC--CCcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESL--KSYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~--~~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. +++|++|++++.||.+|+|++ +|++|+|.+||+.+.++|.|.+++|+|.+. ...++++++++++..
T Consensus 406 ~~~~TGDl-~~~~~~g~l~~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~vv~~~~~~-- 481 (540)
T PRK06164 406 GYFRTGDL-GYTRGDGQFVYQTRMGDSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGATRDGKTVPVAFVIPTDGAS-- 481 (540)
T ss_pred CceecCCe-EEEcCCceEEEEeecCCeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecCCCCceeEEEEEEeCCCCC--
Confidence 69999998 999999999999999999998 899999999999999999999999999653 246788888754310
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccc---cccHHHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNF---KMQRAQLKSYFKP 157 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tg---Kv~R~~i~~~y~~ 157 (174)
.-. +++.+.+ ...+++|++|+.|.++++.+ +|++| |++|+.+++.+++
T Consensus 482 ------------------~~~----~~l~~~~-~~~l~~~~~P~~i~~~~~~P------~t~~g~~~Ki~r~~L~~~~~~ 532 (540)
T PRK06164 482 ------------------PDE----AGLMAAC-REALAGFKVPARVQVVEAFP------VTESANGAKIQKHRLREMAQA 532 (540)
T ss_pred ------------------CCH----HHHHHHH-HhhcccCcCCcEEEEecCCC------CCCCCccccccHHHHHHHHHH
Confidence 001 2233333 45689999999999987654 59888 9999999988776
Q ss_pred HH
Q psy2420 158 QI 159 (174)
Q Consensus 158 ~i 159 (174)
.+
T Consensus 533 ~~ 534 (540)
T PRK06164 533 RL 534 (540)
T ss_pred hh
Confidence 54
No 85
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.77 E-value=3.2e-18 Score=144.35 Aligned_cols=120 Identities=23% Similarity=0.301 Sum_probs=97.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|++++.||++|++|. +|++|+|.+||+.+.++|.|.+++|++.++. ..+++++++.....
T Consensus 360 ~~~~tGDl-~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~- 436 (483)
T PRK03640 360 GWFKTGDI-GYLDEEGFLYVLDRRSDLIIS-GGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEVT- 436 (483)
T ss_pred CCeeccce-EEEcCCCCEEEeecccCeEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999987643 35666666543110
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. +.+.+.+ ...|++|++|..|.++++.+ +|++||++|+.+++.+++
T Consensus 437 ---------------------~----~~l~~~~-~~~l~~~~~p~~i~~~~~iP------~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 437 ---------------------E----EELRHFC-EEKLAKYKVPKRFYFVEELP------RNASGKLLRHELKQLVEE 482 (483)
T ss_pred ---------------------H----HHHHHHH-HHhccCCCCCcEEEEeCCCC------CCCccceeHHHHHHHHhh
Confidence 0 2223333 45689999999999987754 699999999999998875
No 86
>PLN02479 acetate-CoA ligase
Probab=99.77 E-value=3.5e-18 Score=147.56 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=99.6
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|+|++.||.+|+|+. +|++|+|.+||..+..||.|.+|+|+|.++. ..+++++++..+..
T Consensus 429 ~g~~~TGDl-~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 506 (567)
T PLN02479 429 NGWFHSGDL-GVKHPDGYIEIKDRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVD 506 (567)
T ss_pred CCceeccee-EEEcCCccEEEeccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCccc
Confidence 369999998 999999999999999999996 8999999999999999999999999998743 36888888765421
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
.. ...... +++.+++ +..|++|++|+.+.+ .+ + ++|++||++|+.+++.+..
T Consensus 507 ~~---------------~~~~~~----~~l~~~~-~~~l~~~~~P~~~~~-~~-i-----P~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 507 KS---------------DEAALA----EDIMKFC-RERLPAYWVPKSVVF-GP-L-----PKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred cc---------------chhhhH----HHHHHHH-HhhcccccCCceEEe-cc-C-----CCCCccCeeHHHHHHHHHh
Confidence 00 001122 3344444 467999999998876 33 3 3699999999999887554
No 87
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.77 E-value=1.3e-18 Score=148.17 Aligned_cols=116 Identities=19% Similarity=0.250 Sum_probs=94.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|.+++.||.+|+||. +|++|+|.+||.++.++|.|.+|+|+|.++. ..++++|++++..-
T Consensus 398 g~~~TGDl-~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~- 474 (517)
T PRK08008 398 GWLHTGDT-GYVDEEGFFYFVDRRCNMIKR-GGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGET- 474 (517)
T ss_pred CCeeccce-EEECCCCcEEEeecccceEEe-CCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 7999999999999999999999999998753 46788888764310
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
.. . .++.+++ ...+++|++|..+.++++.+ +|++||++|+.+
T Consensus 475 ---------------~~----~----~~l~~~~-~~~l~~~~~P~~~~~v~~iP------~t~~gK~~r~~l 516 (517)
T PRK08008 475 ---------------LS----E----EEFFAFC-EQNMAKFKVPSYLEIRKDLP------RNCSGKIIKKNL 516 (517)
T ss_pred ---------------CC----H----HHHHHHH-HhhcccccCCcEEEEeccCC------CCCccceehhhc
Confidence 00 0 2233333 35689999999999987654 699999999876
No 88
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.77 E-value=2.5e-18 Score=143.14 Aligned_cols=115 Identities=20% Similarity=0.261 Sum_probs=92.5
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+|++|||. +++|++|++++.||.+|+||+ +|++|+|.+||+.+.++|.|.+|+|++.++. ..+.++++.....
T Consensus 290 ~~~~~TGDl-~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~- 366 (414)
T PRK08308 290 DKEIFTKDL-GYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI- 366 (414)
T ss_pred CceEECCce-EEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC-
Confidence 379999998 999999999999999999997 8999999999999999999999999987653 3566777654210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
.. ..+.+++ +..+++|++|..+.+++..+ +|++||++|+.+
T Consensus 367 -----------------~~--------~~l~~~l-~~~l~~~~~P~~i~~v~~iP------~t~~GKi~r~~~ 407 (414)
T PRK08308 367 -----------------DP--------VQLREWC-IQHLAPYQVPHEIESVTEIP------KNANGKVSRKLL 407 (414)
T ss_pred -----------------CH--------HHHHHHH-HHhCccccCCcEEEEeccCC------CCCCcCeehhhh
Confidence 00 1222333 45689999999999987654 699999999954
No 89
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.77 E-value=2.5e-18 Score=147.59 Aligned_cols=125 Identities=19% Similarity=0.261 Sum_probs=101.2
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|.+++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..+++++++.....
T Consensus 399 ~~~~TGDl-~~~~~~g~~~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 475 (542)
T PRK07786 399 GWFHSGDL-VRQDEEGYVWVVDRKKDMIIS-GGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDA- 475 (542)
T ss_pred Ccccccce-EEEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCC-
Confidence 69999998 999999999999999999997 8999999999999999999999999997643 45777777654210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
+... +++.+.+ +..+++|++|..+.++++.+ +|++||++|+.+++.|...-
T Consensus 476 ------------------~~~~----~~l~~~l-~~~l~~~~~P~~i~~v~~iP------~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 476 ------------------ALTL----EDLAEFL-TDRLARYKHPKALEIVDALP------RNPAGKVLKTELRERYGACV 526 (542)
T ss_pred ------------------CCCH----HHHHHHH-HhhccCCCCCCEEEEeccCC------CCCcccccHHHHHHHHHhhh
Confidence 0001 2333333 46789999999999987654 69999999999999888754
No 90
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.77 E-value=2.2e-18 Score=146.59 Aligned_cols=122 Identities=15% Similarity=0.176 Sum_probs=97.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+|+.|||. +++|++|.|++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|+|.++. ..+++++++.+...
T Consensus 408 ~~~~TGD~-~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 484 (533)
T PRK07798 408 RYAIPGDR-ARVEADGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGAR- 484 (533)
T ss_pred ceEEcCcE-EEEcCCCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCC-
Confidence 48999998 999999999999999999996 8999999999999999999999999997643 35777777654210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
...+.+.+.+ +..|++|++|..++++++.+ +|++||++|+.++++-++
T Consensus 485 -------------------~~~~~l~~~l-----~~~l~~~~~P~~i~~~~~iP------~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 485 -------------------PDLAELRAHC-----RSSLAGYKVPRAIWFVDEVQ------RSPAGKADYRWAKEQAAE 532 (533)
T ss_pred -------------------CCHHHHHHHH-----hhhcccCCCCeEEEEcccCC------CCCcchhhHHHHhhhhcc
Confidence 0012222333 45689999999999887654 699999999999887543
No 91
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.76 E-value=1.8e-18 Score=146.89 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=93.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
.|++|||. +++|++|+|++.||.+|+|+. +|++|+|.+||+.+.++|.|.+|+|+|.++. ..+++++++.....
T Consensus 394 ~~~~TGD~-~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~- 470 (515)
T TIGR03098 394 LAVWSGDT-VRRDEEGFLYFVGRRDEMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEE- 470 (515)
T ss_pred cceeccce-EEEcCCceEEEEeccccceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCC-
Confidence 38899998 999999999999999999997 7999999999999999999999999997643 45677776432210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
.. ...+.+.+ ...+++|++|..+.++++.+ +|++||++|+.+++
T Consensus 471 ---------------~~----~~~l~~~l-----~~~l~~~~~p~~i~~v~~iP------~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 471 ---------------LD----RAALLAEC-----RARLPNYMVPALIHVRQALP------RNANGKIDRKALAA 514 (515)
T ss_pred ---------------CC----HHHHHHHH-----HhhCccccCCCEEEEeccCC------CCCCCCCcHHHhcc
Confidence 00 11222333 45689999999999987754 69999999999864
No 92
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.76 E-value=5.2e-18 Score=145.60 Aligned_cols=129 Identities=18% Similarity=0.191 Sum_probs=102.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||+|||. +++|++|++++.||.+|+|+. +|++|+|.+||+++..+|.|.+++|+|.++. ..++++|++.....
T Consensus 409 ~g~~~TGDl-~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 486 (547)
T PRK06087 409 EGWYYSGDL-CRMDEAGYIKITGRKKDIIVR-GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH 486 (547)
T ss_pred CCCcCcCce-EEECCCCCEEEEecchhhhhc-CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC
Confidence 369999998 999999999999999999996 8999999999999999999999999997643 35778887654210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
.... +++.+.+....+++|++|..|.++++.+ +|++||++|+.+++.+.+.
T Consensus 487 ------------------~~~~-----~~~~~~~~~~~l~~~~~P~~i~~v~~iP------~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 487 ------------------SLTL-----EEVVAFFSRKRVAKYKYPEHIVVIDKLP------RTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred ------------------CCCH-----HHHHHHHHhccccccCCCeEEEEeccCC------CCCCCcCcHHHHHHHHHHH
Confidence 0000 2223222235799999999999998765 6999999999999888877
Q ss_pred HHH
Q psy2420 159 IED 161 (174)
Q Consensus 159 i~~ 161 (174)
+..
T Consensus 538 ~~~ 540 (547)
T PRK06087 538 LTQ 540 (547)
T ss_pred hhh
Confidence 643
No 93
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.76 E-value=4.2e-18 Score=146.90 Aligned_cols=117 Identities=21% Similarity=0.314 Sum_probs=95.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|+++|.||.+|+|+. +|++|+|.+||..+.+||.|.+|+|+|.++. ..+++++++.....
T Consensus 441 g~~~TGD~-g~~~~~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 517 (562)
T PRK12492 441 GWFKTGDI-AVIDPDGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL- 517 (562)
T ss_pred CceecCcE-EEECCCCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC-
Confidence 69999998 999999999999999999998 7999999999999999999999999997643 35677777543210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
. . +.+.+++ .+.+++|++|.++.++++.+ +|++||++|+.+++
T Consensus 518 -----------------~---~----~~i~~~~-~~~l~~~~~P~~i~~~~~~P------~t~~GK~~r~~L~~ 560 (562)
T PRK12492 518 -----------------S---V----EELKAYC-KENFTGYKVPKHIVLRDSLP------MTPVGKILRRELRD 560 (562)
T ss_pred -----------------C---H----HHHHHHH-HHhcccccCCcEEEEeccCC------CCCCCceeHHHHHh
Confidence 0 0 2333343 45689999999999987654 69999999999875
No 94
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.76 E-value=3.8e-18 Score=147.01 Aligned_cols=122 Identities=20% Similarity=0.191 Sum_probs=98.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. ++++++|.+++.||.+|+|++ +|++|+|.+||+++.++|.|.+|+|+|.++. ..++++|++.+....
T Consensus 431 g~~~TGD~-~~~~~~g~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~ 508 (563)
T PRK06710 431 GWLHTGDV-GYMDEDGFFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTEC 508 (563)
T ss_pred Ccccccce-EEEcCCCcEEEeeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCC
Confidence 69999998 999999999999999999997 8999999999999999999999999997643 456777776543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+ . +++.+++ ...++.|+.|..|.++++.+ +|++||++|+.+++.+..
T Consensus 509 -----------------~---~----~~l~~~~-~~~l~~~~~P~~~~~v~~iP------~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 509 -----------------S---E----EELNQFA-RKYLAAYKVPKVYEFRDELP------KTTVGKILRRVLIEEEKR 555 (563)
T ss_pred -----------------C---H----HHHHHHH-HHhcccccCCcEEEEcccCC------CCccchhhHHHHHHHHhh
Confidence 0 1 2233333 35689999999999987755 599999999999887654
No 95
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.76 E-value=5.5e-18 Score=144.14 Aligned_cols=122 Identities=22% Similarity=0.261 Sum_probs=98.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+|+.|||. +++|++|++++.||.+|+||. +|++|+|.+||+.|.++|.|.+|+|+|.++. ..++++|++++...
T Consensus 379 ~~~~TGD~-~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 455 (509)
T PRK12406 379 GFITSGDV-GYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT- 455 (509)
T ss_pred CCeEEccE-EEEcCCceEEEeecccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC-
Confidence 69999998 999999999999999999996 8999999999999999999999999997753 34677777653210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
...+.+.+.+ ...+++|++|..+.++++.+ +|++||++|+.+++.|..
T Consensus 456 -------------------~~~~~l~~~l-----~~~l~~~~~P~~i~~~~~iP------~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 456 -------------------LDEADIRAQL-----KARLAGYKVPKHIEIMAELP------REDSGKIFKRRLRDPYWA 503 (509)
T ss_pred -------------------CCHHHHHHHH-----HHhcccCCCCcEEEEeccCC------CCCccchhHHHHHHHHHh
Confidence 0012222333 35689999999999987765 599999999999887654
No 96
>PRK08315 AMP-binding domain protein; Validated
Probab=99.75 E-value=5.9e-18 Score=145.37 Aligned_cols=124 Identities=15% Similarity=0.261 Sum_probs=99.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|.+++.||.+|+|+. +|++|+|.+||+++.++|.|.+|+|++.++. ..++++|++.+...
T Consensus 427 ~~~~TGD~-~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 503 (559)
T PRK08315 427 GWMHTGDL-AVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT- 503 (559)
T ss_pred CCEEccce-EEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC-
Confidence 69999998 999999999999999999996 8999999999999999999999999997754 35777777653210
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
. . . +.+.+++ .+.++.|++|.++.++++.+ +|++||++|..+++.+....
T Consensus 504 ---------------~-~---~----~~l~~~l-~~~l~~~~~P~~i~~v~~lP------~t~~GK~~r~~L~~~~~~~~ 553 (559)
T PRK08315 504 ---------------L-T---E----EDVRDFC-RGKIAHYKIPRYIRFVDEFP------MTVTGKIQKFKMREMMIEEL 553 (559)
T ss_pred ---------------C-C---H----HHHHHHH-HhhcccccCCcEEEEcccCC------CCCCCceeHHHHHHHHHhhh
Confidence 0 0 1 1222232 45689999999999987654 69999999999998866643
No 97
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.75 E-value=8.5e-18 Score=154.87 Aligned_cols=121 Identities=18% Similarity=0.142 Sum_probs=96.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCc--ccceEEEEeeCCC---CcEEEEEEcChHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSL--YVHQIFVYGESLK---SYIVAIVVPDVDV 77 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~--~V~~~~V~g~~~~---~~~~a~v~~~~~~ 77 (174)
+||+|||. +++|+||++++.||.||+||. +|++|+|.+||+++.+|| .+.+|+|++.++. ..+++++++....
T Consensus 1019 ~~~~TGD~-~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~~~ 1096 (1146)
T PRK08633 1019 GWYVTGDK-GHLDEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGAED 1096 (1146)
T ss_pred CeEECCCE-EEEcCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCccC
Confidence 79999998 999999999999999999997 899999999999999998 5678999997754 3567777652110
Q ss_pred HHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 78 VKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
. +++.+...+..+++|++|..+.++++.+ +|++||++|+.+++..+.
T Consensus 1097 -----------------------~----~~l~~~~~~~~l~~~~~P~~i~~~~~iP------~t~~GKi~r~~L~~~~~~ 1143 (1146)
T PRK08633 1097 -----------------------V----EELKRAIKESGLPNLWKPSRYFKVEALP------LLGSGKLDLKGLKELALA 1143 (1146)
T ss_pred -----------------------H----HHHHHHHHhcCCCcccCCcEEEEecCcC------CCCCCCCcHHHHHHHHHH
Confidence 0 1222222235799999999999988765 599999999999877554
Q ss_pred H
Q psy2420 158 Q 158 (174)
Q Consensus 158 ~ 158 (174)
.
T Consensus 1144 ~ 1144 (1146)
T PRK08633 1144 L 1144 (1146)
T ss_pred h
Confidence 3
No 98
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.75 E-value=6.1e-18 Score=144.33 Aligned_cols=117 Identities=22% Similarity=0.263 Sum_probs=94.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+|++|||. +++|++|++++.||.+|+||. +|++|+|.+||..|.++|.|.+++|++.++. ..+.++|++.+...
T Consensus 395 ~g~~~TGDl-~~~d~~G~l~i~GR~~~~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~ 472 (516)
T PRK13383 395 DGMTSTGDM-GYLDNAGRLFIVGREDDMIIS-GGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSG 472 (516)
T ss_pred cCceeccee-EEEcCCccEEEeccccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC
Confidence 379999998 999999999999999999997 8999999999999999999999999997643 45777887654210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
. + . ..+...+ ++.+++|++|..+.++++.+ +|++||++|+.+
T Consensus 473 ~-----------------~---~----~~l~~~~-~~~l~~~~~p~~i~~v~~iP------~t~~gKi~r~~L 514 (516)
T PRK13383 473 V-----------------D---A----AQLRDYL-KDRVSRFEQPRDINIVSSIP------RNPTGKVLRKEL 514 (516)
T ss_pred C-----------------C---H----HHHHHHH-HHhcccCCCCcEEEEeCCCC------CCCCCcCcHHHh
Confidence 0 0 1 2233333 35688999999999987654 599999999886
No 99
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.75 E-value=9.5e-18 Score=143.79 Aligned_cols=122 Identities=20% Similarity=0.195 Sum_probs=96.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. +++|++|++++.||.+|+|+. +|++|+|.+||..+.++|.|.+|+|+|.++. ..++++|++.+....
T Consensus 416 g~~~TGDl-~~~d~dg~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 493 (545)
T PRK08162 416 GWFHTGDL-AVLHPDGYIKIKDRSKDIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASA 493 (545)
T ss_pred CCcccCce-EEEcCCccEEEEecccceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCC
Confidence 69999998 999999999999999999995 8999999999999999999999999997643 457888876543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
+ . +++.+.+ +..|++|++|..+.+ .+. ++|++||++|+.+++++...
T Consensus 494 -----------------~---~----~~l~~~~-~~~l~~~~~P~~~~~-~~i------P~t~~gK~~r~~l~~~~~~l 540 (545)
T PRK08162 494 -----------------T---E----EEIIAHC-REHLAGFKVPKAVVF-GEL------PKTSTGKIQKFVLREQAKSL 540 (545)
T ss_pred -----------------C---H----HHHHHHH-HHhcccccCCcEEEe-ccc------CCCCCcCCcHHHHHHHHhhh
Confidence 0 1 2233333 456899999998865 333 36999999999998887654
No 100
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.74 E-value=6.4e-18 Score=145.38 Aligned_cols=118 Identities=23% Similarity=0.280 Sum_probs=93.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||+|||. +++|++|++++.||.+|+|++ +|++|+|.+||+.+..+|.|.+|+|+|.++. ..++++++......
T Consensus 437 g~~~TGD~-~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~~- 513 (560)
T PRK08751 437 GWLHTGDI-ARMDEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPAL- 513 (560)
T ss_pred CCccccce-EEEcCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCCC-
Confidence 69999998 999999999999999999998 8999999999999999999999999997653 34556555432100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
+ . +.+.+.+ ..++++|++|+.|.++++.+ +|++||++|+.+++.
T Consensus 514 ----------~----------~----~~l~~~~-~~~l~~~~~P~~v~~v~~lP------~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 514 ----------T----------A----EDVKAHA-RANLTGYKQPRIIEFRKELP------KTNVGKILRRELRDA 557 (560)
T ss_pred ----------C----------H----HHHHHHH-HHhhhhccCCeEEEEhhhCC------CCccccccHHHHHHh
Confidence 0 0 1222222 35689999999999987654 699999999999765
No 101
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.74 E-value=1.1e-17 Score=139.07 Aligned_cols=112 Identities=16% Similarity=0.167 Sum_probs=90.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKA 82 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~ 82 (174)
.|++|||. ++||++|+|+|.||.||+||. +|++|+|.+||+.+.+||.|.+|+|+..+ ..++|+|+++++..
T Consensus 275 ~~~~tgD~-g~~d~~G~l~i~GR~dd~Ik~-~G~~V~p~eIE~~l~~~p~V~~~~v~~~g--~~~~a~vv~~~~~~---- 346 (386)
T TIGR02372 275 RRLDLQDR-LAWDKDGGFTILGRKDEILQV-GGVNVSPGHVRDILERNPRVRAAAVRLDG--RRLKAFIVVAEDAD---- 346 (386)
T ss_pred ceeecCce-EEEcCCCcEEEecccCCEEEE-CCEEEcHHHHHHHHHcCCCceEEEEEcCC--ceEEEEEEECCCCC----
Confidence 37889998 999999999999999999997 89999999999999999999999997554 46788888764310
Q ss_pred HHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCcccccc
Q psy2420 83 LENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQ 147 (174)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~ 147 (174)
.. .+.+++.+++ ...+++|++|..+.++++.+ +|++||++
T Consensus 347 --------------~~----~~~~~l~~~~-~~~L~~~~~P~~i~~~~~lP------~t~~GKi~ 386 (386)
T TIGR02372 347 --------------EA----ELEIELRATA-ARHLPAPARPDRFRFGTELP------RTGAGKLA 386 (386)
T ss_pred --------------hH----HHHHHHHHHH-HHhCCCCCCCcEEEEcccCC------CCCCCCcC
Confidence 01 1223444544 46799999999999987765 59999985
No 102
>PRK12316 peptide synthase; Provisional
Probab=99.74 E-value=2.7e-18 Score=175.12 Aligned_cols=138 Identities=18% Similarity=0.218 Sum_probs=110.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC--CcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK--SYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~--~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++++++|.|+++||+|++||+ +|++|+|.+||..|.++|.|.+|+|++.++. ..++|+|++......
T Consensus 4929 ~~yrTGDl-~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~p~V~~a~v~~~~~~~~~~l~a~v~~~~~~~~- 5005 (5163)
T PRK12316 4929 RLYRTGDL-ARYRADGVIDYLGRVDHQVKI-RGFRIELGEIEARLREHPAVREAVVIAQEGAVGKQLVGYVVPQDPALA- 5005 (5163)
T ss_pred ceeecCce-eEECCCCcEEEeccccceEee-ccEeecHHHHHHHHHhCCCcceEEEEEeeCCCCcEEEEEEeCCccccc-
Confidence 59999998 999999999999999999998 8999999999999999999999999987533 468899987643210
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIE 160 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~ 160 (174)
........+...+.+.+ ...||.|++|..++++++.+ +|++||++|+.+.+.|.+.++
T Consensus 5006 ---------------~~~~~~~~~~~~l~~~l-~~~lp~y~vP~~~~~~~~lP------~t~~GKvdR~~L~~~~~~~~~ 5063 (5163)
T PRK12316 5006 ---------------DADEAQAELRDELKAAL-RERLPEYMVPAHLVFLARMP------LTPNGKLDRKALPQPDASLLQ 5063 (5163)
T ss_pred ---------------cccccchhhHHHHHHHH-hccCchhhCCcceeecccCC------CCCCcccChhhcCCccccccc
Confidence 01111223334555555 57899999999999887654 699999999999988887777
Q ss_pred HHhCC
Q psy2420 161 DLYNP 165 (174)
Q Consensus 161 ~ly~~ 165 (174)
+.|..
T Consensus 5064 ~~~~~ 5068 (5163)
T PRK12316 5064 QAYVA 5068 (5163)
T ss_pred cccCC
Confidence 66654
No 103
>PRK12316 peptide synthase; Provisional
Probab=99.74 E-value=4e-18 Score=173.92 Aligned_cols=121 Identities=21% Similarity=0.178 Sum_probs=101.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKA 82 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~ 82 (174)
+||+|||. +++++||.|+++||+||+||+ +|++|+|.+||.+|.+||.|.+|+|++.+ ...++|+|++.++..
T Consensus 886 ~~y~TGDl-~~~~~dG~l~~~GR~d~~ik~-~G~rI~~~EIE~~l~~~p~V~~a~V~~~~-~~~lva~vv~~~~~~---- 958 (5163)
T PRK12316 886 RMYRTGDL-ARYRADGVIEYAGRIDHQVKL-RGLRIELGEIEARLLEHPWVREAAVLAVD-GKQLVGYVVLESEGG---- 958 (5163)
T ss_pred eeEecCcc-EEECCCCCEEeecccCCEEEE-ceEEcChHHHHHHHHhCCCcceEEEEEcC-CCeEEEEEEccCCCC----
Confidence 59999998 999999999999999999998 89999999999999999999999999998 678999999764310
Q ss_pred HHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 83 LENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
... +.+.+++ ...||+|++|+.|+++++.+ +|++||++|+.+.+.+..
T Consensus 959 ----------------~~~----~~l~~~l-~~~Lp~y~vP~~i~~v~~lP------~t~~GKidr~~L~~~~~~ 1006 (5163)
T PRK12316 959 ----------------DWR----EALKAHL-AASLPEYMVPAQWLALERLP------LTPNGKLDRKALPAPEAS 1006 (5163)
T ss_pred ----------------CCH----HHHHHHH-HhhCCCccCCCeEEEHhhCC------CCCCCChhHHhhcCcccc
Confidence 001 2344444 46799999999999987754 699999999999765443
No 104
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.74 E-value=9.5e-18 Score=146.23 Aligned_cols=124 Identities=17% Similarity=0.232 Sum_probs=91.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHh-cCcccce--EEEEeeCCC--CcEEEEEEcChHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYS-KSLYVHQ--IFVYGESLK--SYIVAIVVPDVDV 77 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~-~~~~V~~--~~V~g~~~~--~~~~a~v~~~~~~ 77 (174)
+||+|||. |+++ +|+|+|.||+||+||+ +|++|+|.+||+++. .||.|.+ ++|++.++. ..++++|++.+..
T Consensus 476 ~w~~TGDl-g~~~-dG~l~i~GR~~d~I~~-~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~~~~~~~~v~~~~~~ 552 (612)
T PRK12476 476 TWLRTGDL-GVYL-DGELYITGRIADLIVI-DGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAEDNERLVIVAERAAGT 552 (612)
T ss_pred Ceeecccc-ceeE-CCEEEEEeccCcEEEE-CCcccCHHHHHHHHHHhcccccCCcEEEEEecCCCcceEEEEEEecCCc
Confidence 49999998 9885 9999999999999998 899999999999998 5899999 677886643 4677777765431
Q ss_pred HHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCcee-eeeEEEecC-CCCcCCCccCccccccHHHHHHHH
Q psy2420 78 VKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQ-VKDIYLHPD-PFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~-p~~v~~~~~-~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
.. ...+++.+.+.+.+.. .|++ |+.+.+++. .+ |+|++||++|+.+++.|
T Consensus 553 ~~---------------~~~~~l~~~~~~~l~~--------~~~~~p~~v~~v~~~~l-----P~t~~GKi~r~~L~~~~ 604 (612)
T PRK12476 553 SR---------------ADPAPAIDAIRAAVSR--------RHGLAVADVRLVPAGAI-----PRTTSGKLARRACRAQY 604 (612)
T ss_pred cc---------------ccHHHHHHHHHHHHHH--------hhCCcceEEEEECCCCc-----CcCCchHHHHHHHHHHH
Confidence 00 0113344444444432 2445 577888763 23 37999999999999887
Q ss_pred HH
Q psy2420 156 KP 157 (174)
Q Consensus 156 ~~ 157 (174)
.+
T Consensus 605 ~~ 606 (612)
T PRK12476 605 LD 606 (612)
T ss_pred Hc
Confidence 54
No 105
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.74 E-value=1.1e-17 Score=141.71 Aligned_cols=119 Identities=21% Similarity=0.265 Sum_probs=95.8
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||.|||. ++++++|.+++.||.+|+|++ +|.+|+|.+||+.+.++|.|.+|+|+|.++. ..++++|++.+...
T Consensus 391 ~~~~~tGDl-~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 468 (513)
T PRK07656 391 DGWLHTGDL-GRLDEEGYLYIVDRKKDMFIV-GGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAE 468 (513)
T ss_pred CCceeccce-EEEcCCeeEEEEecccceEEe-CCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCC
Confidence 379999998 999999999999999999997 8999999999999999999999999997643 35678887653110
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
. ++ .++.+++ ...|++|++|..+.++++.+ +|++||++|+.+++
T Consensus 469 --------~---------~~-------~~l~~~~-~~~l~~~~~p~~i~~v~~iP------~t~~gK~~r~~l~~ 512 (513)
T PRK07656 469 --------L---------TE-------EELIAYC-REHLAKYKVPRSIEFLDELP------KNATGKVLKRALRE 512 (513)
T ss_pred --------C---------CH-------HHHHHHH-HhhcccccCCCEEEEecCCC------CCCccceeHHHHhc
Confidence 0 00 2233333 46689999999999987654 69999999999865
No 106
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.73 E-value=1.3e-17 Score=143.42 Aligned_cols=119 Identities=23% Similarity=0.306 Sum_probs=95.3
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||.|||. ++++++|++++.||.+|+|+. +|++|+|.+||+++.++|.|.+++|+|.++. ..++++++......
T Consensus 434 ~g~~~TGDl-~~~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~ 511 (557)
T PRK07059 434 DGFFRTGDV-GVMDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPAL 511 (557)
T ss_pred CCceecCcE-EEEcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCCC
Confidence 379999998 999999999999999999997 7999999999999999999999999997643 35677777543110
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
+ . +.+.+.+ ...+++|++|..+.++++.+ +|++||++|+.++++
T Consensus 512 ------------------~---~----~~l~~~~-~~~l~~~~~P~~i~~v~~~P------~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 512 ------------------T---E----EDVKAFC-KERLTNYKRPKFVEFRTELP------KTNVGKILRRELRDG 555 (557)
T ss_pred ------------------C---H----HHHHHHH-HHhcccccCCcEEEEeccCC------CCcccceeHHHHHhh
Confidence 0 0 2233333 35689999999999987654 699999999998754
No 107
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.72 E-value=3.3e-17 Score=141.08 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=96.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|.+++.||.+|+|++ +|++|+|.+||+.+.++|.|.+|+|+|.++. ..++++++......
T Consensus 432 g~~~TGDl-~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~- 508 (560)
T PRK08974 432 GWLATGDI-AVMDEEGFLRIVDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPSL- 508 (560)
T ss_pred CCcccCCE-EEEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCCC-
Confidence 69999998 999999999999999999998 7999999999999999999999999997653 23455554322100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
. . +++.+.+ ...+++|+.|..+.++.+.+ +|++||++|+.+++.....+
T Consensus 509 -----------------~---~----~~l~~~l-~~~l~~~~~P~~~~~~~~lP------~t~~GK~~r~~l~~~~~~~~ 557 (560)
T PRK08974 509 -----------------T---E----EELITHC-RRHLTGYKVPKLVEFRDELP------KSNVGKILRRELRDEARAKV 557 (560)
T ss_pred -----------------C---H----HHHHHHH-HhhcccccCCcEEEEhhhCC------CCCCCcEeHHHHHHHHHhhh
Confidence 0 0 1233333 45689999999999987654 59999999999998766544
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.72 E-value=2.6e-17 Score=137.08 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=92.4
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHH
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVV 78 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~ 78 (174)
.+||.|||. ++++++|.+++.||.+|+||. +|++|+|.+||..+.++|.|.+|+|++.++. ..+.++|+++.+..
T Consensus 319 ~~~~~TGD~-~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 396 (436)
T TIGR01923 319 QGWFNTGDI-GELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDIS 396 (436)
T ss_pred CCCeeccce-EEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCCC
Confidence 379999998 999999999999999999997 8999999999999999999999999997643 35677777654210
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
. ..+.+++ .+.+++|++|.++.++++.+ +|++||++|+.+
T Consensus 397 ----------------------~----~~l~~~l-~~~l~~~~~p~~i~~~~~iP------~t~~GK~~r~~L 436 (436)
T TIGR01923 397 ----------------------Q----AKLIAYL-TEKLAKYKVPIAFEKLDELP------YNASGKILRNQL 436 (436)
T ss_pred ----------------------H----HHHHHHH-HHhhhCCCCCeEEEEecCCC------CCCCCceecccC
Confidence 0 1222222 35689999999999987654 699999999753
No 109
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.72 E-value=2.9e-17 Score=140.91 Aligned_cols=117 Identities=18% Similarity=0.171 Sum_probs=93.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|++++.||.+|+||. +|++|+|.+||+.+.+++.|.+|+|+|.++. ..+++++++.+....
T Consensus 421 ~~~~TGD~-~~~~~~g~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 498 (541)
T TIGR03205 421 DRFLTGDI-GYMDTDGYFFLVDRKKDMIIS-GGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKP 498 (541)
T ss_pred CCcccCce-EEEcCCceEEEEccccCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCCc
Confidence 68999998 999999999999999999996 8999999999999999999999999997643 357777776543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQL 151 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i 151 (174)
. + . +.+.+.+ ++.|++|++|++|.++++.+ +|++||++|+.+
T Consensus 499 ---------------~-~---~----~~l~~~~-~~~l~~~~~P~~i~~~~~iP------~t~~gK~~r~~l 540 (541)
T TIGR03205 499 ---------------F-S---L----DELRAFL-AGKLGKHELPVAVEFVDELP------RTPVGKLSRHEL 540 (541)
T ss_pred ---------------C-C---H----HHHHHHH-HhhcccccCCcEEEEeccCC------CCcccceeHhhc
Confidence 0 0 0 1223333 46789999999999997754 599999999876
No 110
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.71 E-value=5.8e-17 Score=137.38 Aligned_cols=122 Identities=22% Similarity=0.223 Sum_probs=98.4
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+||.|||. ++++++|.+++.||.+|+++. +|.+|+|.+||+.+.+++.|.+|+|++.++. ..+++++++.+....
T Consensus 395 ~~~~tGD~-~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 472 (521)
T PRK06187 395 GWLHTGDV-GYIDEDGYLYITDRIKDVIIS-GGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATL 472 (521)
T ss_pred Cceeccce-EEEcCCCCEEEeecccceEEc-CCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCC
Confidence 48999998 999999999999999999997 8999999999999999999999999987543 467778776543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+ .+.+.+.+ ...+++|..|..+.++++.+ +|++||++|+.+++.|.+
T Consensus 473 -----------------~---~~~l~~~l-----~~~l~~~~~p~~i~~v~~~P------~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 473 -----------------D---AKELRAFL-----RGRLAKFKLPKRIAFVDELP------RTSVGKILKRVLREQYAE 519 (521)
T ss_pred -----------------C---HHHHHHHH-----HHhccCCCCceEEEEccCCC------CCCCCCeeHHHHHHHHhc
Confidence 0 11222333 35689999999999987654 699999999999988764
No 111
>PRK12467 peptide synthase; Provisional
Probab=99.71 E-value=2.4e-17 Score=165.98 Aligned_cols=120 Identities=20% Similarity=0.192 Sum_probs=98.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCC--CCcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESL--KSYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~--~~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++|++||+|+++||+|++||+ +|++|+|.+||++|.++|.|.+|+|++.+. ...++|+|++....
T Consensus 3471 r~yrTGDl-~~~~~dG~l~~~GR~d~~iki-~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~--- 3545 (3956)
T PRK12467 3471 RLYRTGDL-ARYRADGVIEYLGRIDHQVKI-RGFRIELGEIEARLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQ--- 3545 (3956)
T ss_pred eeeccchh-heecCCCcEEEeccccceEee-ceEeecHHHHHHHHhhCcccceEEEEEecCCCCcEEEEEEeCCCCC---
Confidence 58999998 999999999999999999998 899999999999999999999999998642 35788998875431
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
.... +.+.+.+ +..||.|++|..|+++++.+ +|++||++|+++.+.+
T Consensus 3546 -----------------~~~~----~~l~~~l-~~~Lp~y~vP~~~~~l~~lP------~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3546 -----------------GDWR----ETLRDHL-AASLPDYMVPAQLLVLAAMP------LGPNGKVDRKALPDPD 3592 (3956)
T ss_pred -----------------cccH----HHHHHHH-hccCChhhCCCeeeeeccCC------CCCCCccchhhcCCCC
Confidence 0111 2333343 57899999999999987754 6999999999987643
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.71 E-value=6.2e-17 Score=140.14 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=91.1
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccc--eEEEEeeCCC--CcEEEEEEcChHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVH--QIFVYGESLK--SYIVAIVVPDVDVV 78 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~--~~~V~g~~~~--~~~~a~v~~~~~~~ 78 (174)
+||+|||. +++ ++|+|+++||.+|+||+ +|++|+|.+||++|.+||.|. +|+|++.++. ..+++++.+....
T Consensus 439 gw~~TGDl-g~~-~~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~~~~~~~v~~~~~~- 514 (579)
T PRK09192 439 GWLDTGDL-GYL-LDGYLYITGRAKDLIII-NGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENGEKIVLLVQCRISD- 514 (579)
T ss_pred ceeeccce-eeE-ECCEEEEEeccccEEEE-CCCccCHHHHHHHHHhcCCccCCcEEEEEeccCCCeeEEEEEEecCCC-
Confidence 69999998 998 99999999999999997 899999999999999999998 8999986643 3556666543221
Q ss_pred HHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHH
Q psy2420 79 KCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQ 158 (174)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~ 158 (174)
....+.+.+.+++.. .+.|..|..+.+++. +..|+|++||++|+.+++.|..-
T Consensus 515 -------------------~~~~~~l~~~~~~~l----~~~~~~~~~i~~~~~----~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 515 -------------------EERRGQLIHALAALV----RSEFGVEAAVELVPP----HSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred -------------------hHHHHHHHHHHHHHH----HHHhCCCceEEEeCC----CCcCCCCCcchhHHHHHHHHHcC
Confidence 001122233333321 123556766776641 12347999999999999988773
No 113
>PRK12467 peptide synthase; Provisional
Probab=99.70 E-value=2.2e-17 Score=166.31 Aligned_cols=133 Identities=18% Similarity=0.204 Sum_probs=102.1
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC--CcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK--SYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~--~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++|++||.|+++||+||+||+ +|++|+|.+||+.|.++|.|.+|+|++.+.. ..++|++++......
T Consensus 890 r~yrTGDl-~~~~~dG~l~~~GR~d~~vki-~G~rI~~~eIE~~L~~~p~V~~a~v~~~~~~~~~~lva~vv~~~~~~~- 966 (3956)
T PRK12467 890 RLYRTGDL-ARYRADGVIEYLGRMDHQVKI-RGFRIELGEIEARLLAQPGVREAVVLAQPGDAGLQLVAYLVPAAVADG- 966 (3956)
T ss_pred eeEecCce-eEEcCCCcEEEeccccCeEEE-CCEecCHHHHHHHHHhCCCcceEEEEEEcCCCCcEEEEEEEecccccc-
Confidence 59999998 999999999999999999998 8999999999999999999999999985432 468888886532100
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIE 160 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~ 160 (174)
.......+.+++.+ +..||.|++|..|+++++.+ +|++||++|+.+.+.+.....
T Consensus 967 --------------~~~~~~~~~l~~~l-----~~~Lp~y~vP~~~~~l~~lP------~t~~GKidR~~L~~~~~~~~~ 1021 (3956)
T PRK12467 967 --------------AEHQATRDELKAQL-----RQVLPDYMVPAHLLLLDSLP------LTPNGKLDRKALPKPDASAVQ 1021 (3956)
T ss_pred --------------cccccCHHHHHHHH-----HhhCchhcCCceEeeecccC------CCCCCCcCHhhcCCccccccc
Confidence 00011122333444 46799999999999987654 699999999999876544433
Q ss_pred HHh
Q psy2420 161 DLY 163 (174)
Q Consensus 161 ~ly 163 (174)
..|
T Consensus 1022 ~~~ 1024 (3956)
T PRK12467 1022 ATF 1024 (3956)
T ss_pred ccc
Confidence 333
No 114
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.70 E-value=3.8e-17 Score=152.42 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=94.0
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEee---------CCCCcEEEEEEc
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGE---------SLKSYIVAIVVP 73 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~---------~~~~~~~a~v~~ 73 (174)
+||+|||. ++|+++|.|++.||.|++||+ +|++|+|.+||.+|.++|.|.+|+|++. +....++|+|++
T Consensus 837 ~~y~TGDl-~~~~~~G~l~~~GR~d~~ik~-~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~ 914 (1296)
T PRK10252 837 RMYRTGDV-ARWLDDGAVEYLGRSDDQLKI-RGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVS 914 (1296)
T ss_pred EEEecCce-EEEcCCCcEEEecccCCeEEE-eeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEc
Confidence 59999998 999999999999999999998 8999999999999999999999987653 112368888887
Q ss_pred ChHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 74 DVDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
..... . + .+.+++.+ ...||.|++|..+..+++.+ +|++||++|+.+.+
T Consensus 915 ~~~~~----------------~-~---~~~l~~~l-----~~~Lp~~~~P~~~~~~~~lP------~t~~GKidr~~L~~ 963 (1296)
T PRK10252 915 QSGLP----------------L-D---TSALQAQL-----RERLPPHMVPVVLLQLDQLP------LSANGKLDRKALPL 963 (1296)
T ss_pred CCCCC----------------C-C---HHHHHHHH-----HhhCchhcCCcEEEEecCCC------CCCCcChhHHhcCC
Confidence 54310 0 0 11222333 46799999999999987654 69999999998864
No 115
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.70 E-value=5.4e-17 Score=138.06 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=95.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
+|+.|||. ++++++|.+++.||.+|+|++ +|++|+|.+||+++.++|.|.++++++.++. ..+++++++.+....
T Consensus 384 ~~~~TGD~-~~~~~~g~~~~~gR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 461 (508)
T TIGR02262 384 EWTRSGDK-YVRNDDGSYTYAGRTDDMLKV-SGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDI 461 (508)
T ss_pred Cceeccce-EEEcCCccEEEeccccceeee-CCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCcc
Confidence 69999998 999999999999999999998 6999999999999999999999999996533 356778776543100
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
..... +.+.+.+ +..|++|+.|..+.++++.+ +|++||++|+.+++
T Consensus 462 -----------------~~~~~----~~i~~~~-~~~l~~~~~p~~i~~~~~iP------~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 462 -----------------DTALE----TELKEHV-KDRLAPYKYPRWIVFVDDLP------KTATGKIQRFKLRE 507 (508)
T ss_pred -----------------ccccH----HHHHHHH-HHhcccCCCCceEEEecCCC------CCCCCcEehhhccC
Confidence 01112 3343443 45689999999998887654 69999999998764
No 116
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.69 E-value=2e-16 Score=136.77 Aligned_cols=130 Identities=16% Similarity=0.142 Sum_probs=90.3
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC--CcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK--SYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~--~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++++ +|+|+|.||+||+||+ +|++|+|.+||.++.+||.+. |+|++.++. ..++|+|++......
T Consensus 437 ~w~~TGDl-~~~~-~G~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~~~-~~v~~v~~~~~~~~~a~v~~~~~~~~- 511 (578)
T PRK05850 437 PWLRTGDL-GFIS-EGELFIVGRIKDLLIV-DGRNHYPDDIEATIQEITGGR-VAAISVPDDGTEKLVAIIELKKRGDS- 511 (578)
T ss_pred Ceeeccce-eeEE-CCEEEEEcccccEEEE-CCeecCHHHHHHHHHHhcCCc-EEEEEecCCCceEEEEEEEeccccCc-
Confidence 59999998 9988 9999999999999997 899999999999999999854 777776643 468888886543100
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKP 157 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~ 157 (174)
+. ........+.+.+.+..+. ..+..|..+.+++. +..|+|++||++|+.++++|.+
T Consensus 512 ---------~~----~~~~~~~~l~~~v~~~l~~---~~~~~~~~~~~~~~----~~iP~t~~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 512 ---------DE----EAMDRLRTVKREVTSAISK---SHGLSVADLVLVAP----GSIPITTSGKIRRAACVEQYRQ 568 (578)
T ss_pred ---------ch----hhhhhHHHHHHHHHHHHHH---HhCCCceEEEEeCC----CCcCCCCCchHHHHHHHHHHHc
Confidence 00 0011223444444433211 11124666666642 1124799999999999998866
No 117
>PRK05691 peptide synthase; Validated
Probab=99.68 E-value=5.6e-17 Score=164.31 Aligned_cols=126 Identities=18% Similarity=0.162 Sum_probs=98.5
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCC--CCcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESL--KSYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~--~~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++|++||.|+++||.|++||+ +|++|+|.+||.+|.++|.|.+|+|++.+. ...++|++++.......
T Consensus 2568 r~y~TGDl-~~~~~dG~l~~~GR~d~qvki-~G~rIe~~EIE~~l~~~p~V~~a~V~~~~~~~~~~lva~vv~~~~~~~~ 2645 (4334)
T PRK05691 2568 RLYRTGDL-VRLRADGLVEYVGRIDHQVKI-RGFRIELGEIESRLLEHPAVREAVVLALDTPSGKQLAGYLVSAVAGQDD 2645 (4334)
T ss_pred ceEeccce-EEEcCCCCEEEeecccCeEEe-eeEEechHHHHHHHHhCCCcceEEEEEeeCCCCcEEEEEEEeccccccc
Confidence 59999998 999999999999999999998 899999999999999999999999998643 25688888764221000
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYF 155 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y 155 (174)
. ...... +.+.+.+ +..||.|++|..|.++++.+ +|++||++|+.+.+.+
T Consensus 2646 ---------~-----~~~~~~----~~l~~~l-~~~Lp~ymvP~~~~~v~~lP------~t~~GKidr~~L~~~~ 2695 (4334)
T PRK05691 2646 ---------E-----AQAALR----EALKAHL-KQQLPDYMVPAHLILLDSLP------LTANGKLDRRALPAPD 2695 (4334)
T ss_pred ---------c-----cccccH----HHHHHHH-HhhCccccCChhheeecccC------CCCCCcccHHhhcCcc
Confidence 0 001112 3344444 57799999999999987754 6999999999997543
No 118
>PRK05691 peptide synthase; Validated
Probab=99.66 E-value=2.3e-16 Score=159.98 Aligned_cols=121 Identities=20% Similarity=0.214 Sum_probs=97.7
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeC--CCCcEEEEEEcChHHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGES--LKSYIVAIVVPDVDVVKC 80 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~--~~~~~~a~v~~~~~~~~~ 80 (174)
+||+|||. ++|++||.|.++||+|++||+ +|++|.+.+||..|.++|.|.+|+|+... ....++|++++.....
T Consensus 4102 ~~yrTGDl-~~~~~dG~l~~~GR~d~qvki-~G~riel~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~-- 4177 (4334)
T PRK05691 4102 RLYRTGDL-ARRRSDGVLEYVGRIDHQVKI-RGYRIELGEIEARLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVL-- 4177 (4334)
T ss_pred eeeccCcc-eeecCCCcEEEecccCCcEEe-ceEEecHHHHHHHHHhCCCccEEEEEEecCCCCcEEEEEEeCCcccc--
Confidence 69999998 999999999999999999998 89999999999999999999999887532 2357888888754321
Q ss_pred HHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHH
Q psy2420 81 KALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKS 153 (174)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~ 153 (174)
......+.+++.+ +..||.|++|..++.+++.+ +|++||++|+.+.+
T Consensus 4178 ---------------~~~~~~~~l~~~l-----~~~Lp~ymvP~~~~~~~~lP------~t~~GKidr~~L~~ 4224 (4334)
T PRK05691 4178 ---------------AQGALLERIKQRL-----RAELPDYMVPLHWLWLDRLP------LNANGKLDRKALPA 4224 (4334)
T ss_pred ---------------cchHHHHHHHHHH-----HhhCChhhcCcceeecccCC------CCCCCcccHhhcCC
Confidence 0122233344444 57799999999999887654 69999999999865
No 119
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.61 E-value=2.1e-15 Score=129.41 Aligned_cols=126 Identities=14% Similarity=0.144 Sum_probs=85.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeC--CC--CcEEEEEE-cChHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGES--LK--SYIVAIVV-PDVDV 77 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~--~~--~~~~a~v~-~~~~~ 77 (174)
+||+|||. +++|++|++++.||.+|+|++ +|++|+|.+||+.+.++|.|.+++|++.+ +. ....++++ +....
T Consensus 414 g~~~TGDl-~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~ 491 (545)
T PRK07768 414 GWLDTGDL-GYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE 491 (545)
T ss_pred Ceeeccce-EEEecCCEEEEEccccceEEE-CCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc
Confidence 59999998 999999999999999999998 89999999999999999999998776532 11 12233333 22211
Q ss_pred HHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHH
Q psy2420 78 VKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFK 156 (174)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~ 156 (174)
... ...++.+.+.+.+... +. .+|..+.+++. +..++|++||++|+.+++.|.
T Consensus 492 ~~~---------------~~~~l~~~~~~~l~~~-----~~--~~p~~v~~v~~----~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 492 DPA---------------EVRRIRHQVAHEVVAE-----VG--VRPRNVVVLGP----GSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred cHH---------------HHHHHHHHHHHHHHHH-----hC--CCccEEEEeCC----CcCCCCCchhHHHHHHHHhcC
Confidence 000 0012233333333221 11 36777888752 112469999999999998763
No 120
>KOG1179|consensus
Probab=99.48 E-value=4.2e-14 Score=119.44 Aligned_cols=118 Identities=22% Similarity=0.365 Sum_probs=93.6
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCC-----CCcEEEEEEcChHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESL-----KSYIVAIVVPDVDV 77 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~-----~~~~~a~v~~~~~~ 77 (174)
.||.|||. -.+|+.|+||+.||..|++.+ .||||++.|||..|....+++||.|||..- +..+.|++ .++..
T Consensus 488 ~~f~tGDl-Lv~D~~GylYF~DRtGDTFRW-KGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~-~~p~~ 564 (649)
T KOG1179|consen 488 VYFNTGDL-LVADELGYLYFKDRTGDTFRW-KGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIV-LDPTT 564 (649)
T ss_pred EEEeeCcE-EEEecCCcEEEeccCCCceee-cCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEE-ecCcc
Confidence 58899998 899999999999999999999 899999999999999999999999999532 23455665 23321
Q ss_pred HHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 78 VKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
. ...+.+-+.+ ...||+|++|.+++++++.. +|.|.|.++..+.+.
T Consensus 565 ~--------------------~d~~~l~~~l-----~~~LP~YA~P~FlRl~~~i~------~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 565 E--------------------KDLEKLYQHL-----RENLPSYARPRFLRLQDEIE------KTGTFKLQKTELQKE 610 (649)
T ss_pred c--------------------chHHHHHHHH-----HhhCccccchHHHHHHhhhh------cccchhhHHHHHHHc
Confidence 1 1112222344 47799999999999998765 599999999888764
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.20 E-value=1.2e-10 Score=97.66 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=54.5
Q ss_pred CcccccCCceeeccC-C-----cEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEc
Q psy2420 3 KFLSKDKNEEIKSES-G-----ALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVP 73 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~-G-----~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~ 73 (174)
.||.|||. ++++++ | .++|.||.+|+|++ .|.+|+|.+||.++.++|.|...+.+..... ..+.+.|++
T Consensus 289 ~ry~TGDl-~~~~~~~Gr~~~~~~~i~GR~~d~i~~-~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~ 366 (422)
T TIGR02155 289 IRYRTRDL-TRLLPGTARTMRRMDRITGRSDDMLII-RGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVEL 366 (422)
T ss_pred eeEEcCcE-EEEECCCCCcccccccccCccCCeEEE-CCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEE
Confidence 48999998 999876 4 57899999999998 7999999999999999999984443332212 245555555
Q ss_pred Ch
Q psy2420 74 DV 75 (174)
Q Consensus 74 ~~ 75 (174)
.+
T Consensus 367 ~~ 368 (422)
T TIGR02155 367 KP 368 (422)
T ss_pred ec
Confidence 43
No 122
>KOG1178|consensus
Probab=99.18 E-value=6.8e-11 Score=107.16 Aligned_cols=120 Identities=18% Similarity=0.204 Sum_probs=98.8
Q ss_pred CcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHH
Q psy2420 3 KFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVK 79 (174)
Q Consensus 3 ~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~ 79 (174)
..++|||. |+..+.|.+.+.||.+++||. +|.+|...+|+..+..||.|.++++.+..++ +.+.|+|++.....
T Consensus 454 r~y~tgD~-gr~l~ng~l~~~GR~d~qIK~-rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~- 530 (1032)
T KOG1178|consen 454 RIYRTGDN-GRSLKNGGLEISGRADRQIKD-RGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSK- 530 (1032)
T ss_pred hccccccc-ceeecCCCEEEEEeccceEEE-ccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCC-
Confidence 56789998 988889999999999999998 8999999999999999999999998875533 46899998765421
Q ss_pred HHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHH
Q psy2420 80 CKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSY 154 (174)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~ 154 (174)
+.. ...|+.++ +..|+.|+.|..++.+++.+ +|++||+++.++...
T Consensus 531 ------------------~~~----~~~i~~~l-~~~La~y~vPs~~V~l~~vP------l~~~GKvDkkaL~~~ 576 (1032)
T KOG1178|consen 531 ------------------SVL----IRDIRNYL-KKELASYMLPSLVVPLAKVP------LNPNGKVDKKALLEY 576 (1032)
T ss_pred ------------------chh----HHHHHHhh-cccccceecceEEEEhhhCC------cCCCCCcChhhhhhh
Confidence 111 24455555 68899999999988887765 799999999999883
No 123
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.97 E-value=1e-09 Score=70.17 Aligned_cols=68 Identities=24% Similarity=0.201 Sum_probs=48.2
Q ss_pred HHHHHHhcCcccceEEEEeeCCC---CcEEEEEEcChHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCC
Q psy2420 42 KIEAVYSKSLYVHQIFVYGESLK---SYIVAIVVPDVDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLR 118 (174)
Q Consensus 42 ~iE~~l~~~~~V~~~~V~g~~~~---~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~ 118 (174)
+||+++.+||.|.+|+|+|.++. ..++|+|++ .. ++|.+++ +..|+
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-~~-----------------------------~~i~~~~-~~~l~ 49 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-DE-----------------------------EEIRDHL-RDKLP 49 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-HH-----------------------------HHHHHHH-HHHS-
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-ee-----------------------------cccccch-hhhCC
Confidence 69999999999999999998754 578999988 10 2333333 34589
Q ss_pred Cceee--eeEEEecCCCCcCCCccCcccc
Q psy2420 119 NFEQV--KDIYLHPDPFSVQNGLLTPNFK 145 (174)
Q Consensus 119 ~~~~p--~~v~~~~~~~~~~~~~~T~tgK 145 (174)
+|++| ..++.+++.+ ++|+|||
T Consensus 50 ~~~~P~~~~~v~~~~~l-----P~t~~GK 73 (73)
T PF13193_consen 50 PYMVPRRIRFVRLDEEL-----PRTPSGK 73 (73)
T ss_dssp GGGS-SEEEEEEESSSE-----EBETTSS
T ss_pred CcceeeEEEEccccCcC-----CCCCCCC
Confidence 99999 5555556534 3799998
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=97.44 E-value=0.0011 Score=56.18 Aligned_cols=48 Identities=8% Similarity=0.096 Sum_probs=37.0
Q ss_pred ccccCCceeec--c---CCc----EEEEccCcCceecCCceeeccHHHHHHHhcC---cccc
Q psy2420 5 LSKDKNEEIKS--E---SGA----LKIIDRKRHIFKLAQGEYIVPEKIEAVYSKS---LYVH 54 (174)
Q Consensus 5 ~~tgd~~~~~d--~---~G~----l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~---~~V~ 54 (174)
|.|||. +.+. + .|. +..+||.+|++++ .|.+|+|..||++|.+. +.+.
T Consensus 300 YrtgD~-~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~-~g~~~~p~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 300 YDTEDT-TVVISRDRCPCGRTHMRILNPEREAETIWI-SGVPFNRVDVERAVFQRENMDSLT 359 (445)
T ss_pred eecCce-EEEecCCCCCCCCCcceeCCCcccCceEEE-CCEEeCHHHHHHHHhccCCCCCCC
Confidence 469997 7652 1 232 4457999999999 89999999999999984 5553
No 125
>KOG3628|consensus
Probab=97.35 E-value=0.0028 Score=58.44 Aligned_cols=128 Identities=12% Similarity=0.132 Sum_probs=85.5
Q ss_pred CCcccccCCceeec------cCC----cEEEEccCcCceecCCceeeccHHHHHHHh-cCcccceEEEEeeCCCCcEEEE
Q psy2420 2 KKFLSKDKNEEIKS------ESG----ALKIIDRKRHIFKLAQGEYIVPEKIEAVYS-KSLYVHQIFVYGESLKSYIVAI 70 (174)
Q Consensus 2 ~~~~~tgd~~~~~d------~~G----~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~-~~~~V~~~~V~g~~~~~~~~a~ 70 (174)
+.|.+||+. |.+- ..| -||++|-.++.+.+ +|.+-.|..||..+. .||.|.+|+||-.. . .++.+
T Consensus 1218 ~sy~RTG~L-GFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl-~GL~h~p~DIE~TV~~vH~~I~~cavF~~~-g-lvVvv 1293 (1363)
T KOG3628|consen 1218 KSYARTGDL-GFLRRTSLTDANVERHDLLYVLGAIDETLEL-NGLRHFPSDIETTVERVHPSIGGCAVFQAT-G-LVVVV 1293 (1363)
T ss_pred ccceeeeee-eeeeeeecccccceeeeeEEEeecccceeee-cCcccCcchHHHHHHHhcccccceeeEeeC-C-eEEEE
Confidence 479999998 7763 222 49999999999999 999999999999996 79999999999665 2 22323
Q ss_pred EEcChHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHHHHhCCCCCceeeee-EEEecCCCCcCCCccCccccccHH
Q psy2420 71 VVPDVDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAWARQDGLRNFEQVKD-IYLHPDPFSVQNGLLTPNFKMQRA 149 (174)
Q Consensus 71 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~-v~~~~~~~~~~~~~~T~tgKv~R~ 149 (174)
+-... .+++.+.+=-.++.+ |..|..+-. +.+++. ...+..+.|-.+|.
T Consensus 1294 iE~~g---------------------q~~~~~LvPlIv~~v-----L~eH~iI~dvV~fV~~----G~~p~~~~gEK~R~ 1343 (1363)
T KOG3628|consen 1294 IECHG---------------------QQELADLVPLIVNVV-----LEEHYIILDVVAFVDK----GVFPRNSRGEKQRA 1343 (1363)
T ss_pred EEecC---------------------chhHhhhhHHHHHHH-----HhhcceEEEEEEEecC----CccccCCchhhHHH
Confidence 32222 122222222222222 455556655 445553 34467899999999
Q ss_pred HHHHHHHH-HHHHHh
Q psy2420 150 QLKSYFKP-QIEDLY 163 (174)
Q Consensus 150 ~i~~~y~~-~i~~ly 163 (174)
.|++.+-+ .|+-+|
T Consensus 1344 ~I~~~w~~~kL~~~~ 1358 (1363)
T KOG3628|consen 1344 HILDSWLAGKLDPIY 1358 (1363)
T ss_pred HHHHHHHhcccceee
Confidence 99987544 355444
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=97.19 E-value=0.0025 Score=53.85 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=54.0
Q ss_pred ccccCCceeecc----CC-----cEEEEccCcCceecCCceeeccHHHHHHHhcCcccc---eEEEEeeCCCCcEEEEEE
Q psy2420 5 LSKDKNEEIKSE----SG-----ALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVH---QIFVYGESLKSYIVAIVV 72 (174)
Q Consensus 5 ~~tgd~~~~~d~----~G-----~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~---~~~V~g~~~~~~~~a~v~ 72 (174)
|+|||. .++.. .| .-.|.||.+|++++ .|.+|+|..||..+.+++.+. ++++.+......+...|.
T Consensus 304 YrtgDi-t~i~~~~C~cGr~~~ri~~I~GR~dD~l~~-~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE 381 (438)
T COG1541 304 YRTGDI-TVILSDPCGCGRTHRRIERIEGRSDDMLIV-RGVNVFPSQIERVLLQIPEVTPHYQIILTRNGGLDELTVRVE 381 (438)
T ss_pred EEcCCe-eEecccCCCCCCccccccccCcccccEEEE-CCEEeCHHHHHHHHhcccCCCceEEEEEecCCCCceEEEEEE
Confidence 578888 66654 23 27899999999999 699999999999999999999 788888443455565565
Q ss_pred cCh
Q psy2420 73 PDV 75 (174)
Q Consensus 73 ~~~ 75 (174)
..+
T Consensus 382 ~~~ 384 (438)
T COG1541 382 LEN 384 (438)
T ss_pred ecC
Confidence 543
No 127
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.64 E-value=0.012 Score=39.42 Aligned_cols=88 Identities=19% Similarity=0.124 Sum_probs=46.8
Q ss_pred ceeeccHHHHHHHhcCcccce---EEEEeeCCCCcEEEEEEcChHHHHHHHHHcCCCCChhhhcCCHHHHHHHHHHHHHH
Q psy2420 35 GEYIVPEKIEAVYSKSLYVHQ---IFVYGESLKSYIVAIVVPDVDVVKCKALENGIPGTLSVLCADPKVKQMIMEDMAAW 111 (174)
Q Consensus 35 G~~V~p~~iE~~l~~~~~V~~---~~V~g~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 111 (174)
|.||+|..||+++.+.|.+.. ++|.-......+...|-+.+.... ++...+.+.+.|.+.+++.
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~-------------~~~~~~~l~~~i~~~lk~~ 67 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSD-------------DAEDLEALAERIAERLKER 67 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCT-------------THHHHHHHHHHHHHHHHHH
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCc-------------chHHHHHHHHHHHHHHHhh
Confidence 789999999999999999984 223323323444555555443210 0011245666677777665
Q ss_pred HHhCCCCCceeeeeEEEecCCCCcCCCccCccccccH
Q psy2420 112 ARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQR 148 (174)
Q Consensus 112 ~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R 148 (174)
. ++ .+ .|.+++. ...+.| +||.+|
T Consensus 68 l---gv----~~-~V~lv~~----gtLpr~-~~K~~R 91 (96)
T PF14535_consen 68 L---GV----RP-EVELVPP----GTLPRS-EGKAKR 91 (96)
T ss_dssp H---SS-----E-EEEEE-T----T-S----SSSS-S
T ss_pred c---Cc----eE-EEEEECC----CCccCC-CCcceE
Confidence 3 23 23 6677653 223344 678766
No 128
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=95.46 E-value=0.28 Score=41.71 Aligned_cols=68 Identities=19% Similarity=0.248 Sum_probs=44.6
Q ss_pred ccccCCceeeccC----Cc----E-EEEccCcCcee--cCCceee--ccHHHHHHHh-cCcccceEEEEeeCCCCcEEEE
Q psy2420 5 LSKDKNEEIKSES----GA----L-KIIDRKRHIFK--LAQGEYI--VPEKIEAVYS-KSLYVHQIFVYGESLKSYIVAI 70 (174)
Q Consensus 5 ~~tgd~~~~~d~~----G~----l-~i~GR~~d~i~--~s~G~~V--~p~~iE~~l~-~~~~V~~~~V~g~~~~~~~~a~ 70 (174)
|.|||. +.+.++ |. + .|.||.+|+++ ..+|..| +|..++..+. ..+.|.+.=++-.. ...+...
T Consensus 297 YrtGD~-~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~-~~~l~v~ 374 (430)
T TIGR02304 297 YRLNDI-LVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG-SAQLELI 374 (430)
T ss_pred eeCCCE-EEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc-CCeEEEE
Confidence 468887 666433 43 3 48899999998 4567666 8899998854 57888886555333 3334444
Q ss_pred EEcC
Q psy2420 71 VVPD 74 (174)
Q Consensus 71 v~~~ 74 (174)
+++.
T Consensus 375 ~~~~ 378 (430)
T TIGR02304 375 ADCE 378 (430)
T ss_pred EEeC
Confidence 4544
No 129
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=91.47 E-value=0.21 Score=40.90 Aligned_cols=25 Identities=28% Similarity=0.220 Sum_probs=23.7
Q ss_pred CceeeccHHHHHHHhcCcccceEEE
Q psy2420 34 QGEYIVPEKIEAVYSKSLYVHQIFV 58 (174)
Q Consensus 34 ~G~~V~p~~iE~~l~~~~~V~~~~V 58 (174)
+|++|+|.+||+.+..+|.|.+|+|
T Consensus 384 ~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 384 RGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred CeEEechHHHHHHHhcCcchhhhcC
Confidence 8999999999999999999999875
No 130
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=74.24 E-value=17 Score=22.07 Aligned_cols=49 Identities=10% Similarity=0.139 Sum_probs=33.5
Q ss_pred eecCCceeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHH
Q psy2420 30 FKLAQGEYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKC 80 (174)
Q Consensus 30 i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~ 80 (174)
|++..|. -....+.+.+.++|.|.+|..+.-. ..++.-+.+++-+.+..
T Consensus 3 V~~~~~~-~~~~~~~~~l~~~p~V~~~~~vtG~-~d~~~~v~~~d~~~l~~ 51 (74)
T PF01037_consen 3 VKVEPGH-DAYDEFAEALAEIPEVVECYSVTGE-YDLILKVRARDMEELEE 51 (74)
T ss_dssp EEESTTG-THHHHHHHHHHTSTTEEEEEEESSS-SSEEEEEEESSHHHHHH
T ss_pred EEEcCCC-chHHHHHHHHHcCCCEEEEEEEeCC-CCEEEEEEECCHHHHHH
Confidence 3444455 5578899999999999999866444 55666666666654443
No 131
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=74.23 E-value=9.9 Score=26.20 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=36.7
Q ss_pred cCcCceecCCc--eeeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHHHHcC
Q psy2420 25 RKRHIFKLAQG--EYIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKALENG 86 (174)
Q Consensus 25 R~~d~i~~s~G--~~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~~~~~ 86 (174)
|.|.+=+--.| .+++++++|..|..-| +.+|+|.+. ..++.+.+++ ..+++..+
T Consensus 34 r~K~lskrK~GTSHkl~~eEle~~lee~~---E~ivvGTG~----~G~l~l~~ea-~e~~r~k~ 89 (121)
T COG1504 34 REKELSKRKYGTSHKLALEELEELLEEGP---EVIVVGTGQ----SGMLELSEEA-REFFRKKG 89 (121)
T ss_pred hhhhhhhhhcCcccccCHHHHHHHHhcCC---cEEEEecCc----eeEEEeCHHH-HHHHHhcC
Confidence 66666555456 8999999999998765 458999883 3445555443 44555555
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=67.33 E-value=19 Score=31.53 Aligned_cols=54 Identities=13% Similarity=0.246 Sum_probs=36.6
Q ss_pred cccCCceeec--cCC--cEEEEccCcCceecCCceeeccHHHHHHHhcC-----cccceEEEEee
Q psy2420 6 SKDKNEEIKS--ESG--ALKIIDRKRHIFKLAQGEYIVPEKIEAVYSKS-----LYVHQIFVYGE 61 (174)
Q Consensus 6 ~tgd~~~~~d--~~G--~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~-----~~V~~~~V~g~ 61 (174)
+-||. .++. .++ .+.|+||.+.++.+ .||+++-..+.+++.+. -.+.+-.+.++
T Consensus 372 ~iGDv-Vrv~gf~~~~P~i~F~~R~~~~l~l-~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~ 434 (528)
T PF03321_consen 372 RIGDV-VRVTGFYNQTPRIEFVGRRGQVLSL-FGEKLSEEQVQEAVARALQETGLELRDFTVAPD 434 (528)
T ss_dssp EECEE-EEEEEEETTEEEEEEEEETTEEE-S-SS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE
T ss_pred ecCCE-EEEeeccCCCcEEEEeccCCceeec-ceeecCHHHHHHHHHHHHHhcCCceeeEEEEee
Confidence 35665 4443 334 59999999999998 89999999999999753 34555555555
No 133
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=64.75 E-value=90 Score=27.99 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=33.3
Q ss_pred cccCCceeecc----CCcEEEEccCcCceecCCceeeccHHHHHHHhc
Q psy2420 6 SKDKNEEIKSE----SGALKIIDRKRHIFKLAQGEYIVPEKIEAVYSK 49 (174)
Q Consensus 6 ~tgd~~~~~d~----~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~ 49 (174)
.-||. .++.. .=.+.|+||.+.++.+ .||++.-+.++.++.+
T Consensus 411 ~iGDv-Vrvtgf~~~~P~i~F~gR~~~~ls~-~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 411 RVGDI-LRVTGFHNSAPQFKFIRRKNVLLSI-ESDKTDEADLQKAVEN 456 (597)
T ss_pred ecCCE-EEEeeccCCCcEEEEEccCCcceec-ccccCCHHHHHHHHHH
Confidence 35666 55531 2358999999999998 8999999999999876
No 134
>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes. Sphingolipid delta 4-desaturase catalyses the formation of (E)-sphing-4-enine []. Some proteins in this entry have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis []. This small protein associates with FA_desaturase IPR005804 from INTERPRO and appears to be specific to sphingolipid delta 4-desaturase. ; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=62.48 E-value=5.9 Score=21.95 Aligned_cols=21 Identities=24% Similarity=0.483 Sum_probs=17.7
Q ss_pred cccHHHHHHHHHHHHHHHhCCC
Q psy2420 145 KMQRAQLKSYFKPQIEDLYNPP 166 (174)
Q Consensus 145 Kv~R~~i~~~y~~~i~~ly~~~ 166 (174)
..+|+.|.++| .+|.+||+-.
T Consensus 16 ~~RRk~IL~k~-PeIk~L~G~d 36 (39)
T PF08557_consen 16 ASRRKEILKKH-PEIKKLMGPD 36 (39)
T ss_pred HHHHHHHHHhC-hHHHHHhCCC
Confidence 46899999999 8899999753
No 135
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=55.98 E-value=21 Score=27.71 Aligned_cols=63 Identities=11% Similarity=0.146 Sum_probs=37.2
Q ss_pred CCceeeccCCcEEEEccCcCceecCCce--eeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHH
Q psy2420 9 KNEEIKSESGALKIIDRKRHIFKLAQGE--YIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDV 77 (174)
Q Consensus 9 d~~~~~d~~G~l~i~GR~~d~i~~s~G~--~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~ 77 (174)
....+.++||...|.|.. +.+.+++ ++.-..+...+...| .+.+++|.++... ...++-++++
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~~k~-~I~vFtDp~C 119 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQEKH-VITVFTDITC 119 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCCCCE-EEEEEECCCC
Confidence 334899999999999965 4442222 443333344444444 4578898874433 4445555554
No 136
>KOG2825|consensus
Probab=53.82 E-value=29 Score=27.89 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=22.2
Q ss_pred CccccccHHHHHHHHHHHHHHHhCCC
Q psy2420 141 TPNFKMQRAQLKSYFKPQIEDLYNPP 166 (174)
Q Consensus 141 T~tgKv~R~~i~~~y~~~i~~ly~~~ 166 (174)
+-+.--.|+++.++|-+.|+++|++.
T Consensus 271 ~ck~C~ar~k~Q~kyLdqi~elyedf 296 (323)
T KOG2825|consen 271 SCKKCAARRKMQSKYLDQIEELYEDF 296 (323)
T ss_pred chHHHHHHHHHHHHHhhhHHHHHhhc
Confidence 45666789999999999999999884
No 137
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=52.41 E-value=29 Score=25.44 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=24.1
Q ss_pred cHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEc
Q psy2420 40 PEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVP 73 (174)
Q Consensus 40 p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~ 73 (174)
...|++.+.+.|+|.+|.|+-.. ....+|+-+.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~-~~a~Vav~~~ 109 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTD-DNAYVAVDLD 109 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEEC-CEEEEEEEec
Confidence 45677888899999999998876 4444555543
No 138
>PF12503 CMV_1a_C: Cucumber mosaic virus 1a protein C terminal ; InterPro: IPR022184 This domain family is found in viruses, and is approximately 90 amino acids in length. The family is found in association with PF01443 from PFAM, PF01660 from PFAM. There is a conserved GLG sequence motif. 1a protein is the major virulence factor of the (Cucumber mosaic virus. The Ns strain of CMV causes necrotic lesions to Nicotiana spp. while other strains cause systemic mosaic. The determinant of the pathogenesis of these different strains is the specific amino acid residue at the 461 residue of the 1a protein. ; GO: 0008168 methyltransferase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=49.14 E-value=11 Score=24.36 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=28.9
Q ss_pred cccccCCceeeccCCcE--EEEccCcCceec--CCceeeccHHHHHHH
Q psy2420 4 FLSKDKNEEIKSESGAL--KIIDRKRHIFKL--AQGEYIVPEKIEAVY 47 (174)
Q Consensus 4 ~~~tgd~~~~~d~~G~l--~i~GR~~d~i~~--s~G~~V~p~~iE~~l 47 (174)
|-..|.+.....-.+.+ -..=|.|+++.+ ++|.+..|..+|=.+
T Consensus 3 W~~aGg~~~~n~~~sn~V~dTY~~vD~lVNvHf~~GrWm~P~~~~Y~V 50 (85)
T PF12503_consen 3 WCLAGGDGKSNSLESNLVFDTYHRVDPLVNVHFPNGRWMYPEGYEYMV 50 (85)
T ss_pred eEcccCCCCccccccceeEEEEeeccccEEEEecCCceecCCCeEEEe
Confidence 44455553555556644 233489999876 889999988776444
No 139
>PHA02885 putative interleukin binding protein; Provisional
Probab=46.92 E-value=15 Score=25.02 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=24.7
Q ss_pred ccCCcEEEEccCcCceecCCceeeccHHHHHHHh
Q psy2420 15 SESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYS 48 (174)
Q Consensus 15 d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~ 48 (174)
.+||+++.+|... +|-|++|.|+-+|-+..
T Consensus 58 sedgyiywi~pnn----tspgeyif~enl~g~~e 87 (135)
T PHA02885 58 SEDGYIYWIGPNN----TSPGEYIFIENLEGANE 87 (135)
T ss_pred CCCceEEEEeCCC----CCCcceeeeeccccccc
Confidence 3899999999864 47899999999887654
No 140
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=38.76 E-value=37 Score=16.83 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=14.6
Q ss_pred eeccCCcEEEEccCcCcee
Q psy2420 13 IKSESGALKIIDRKRHIFK 31 (174)
Q Consensus 13 ~~d~~G~l~i~GR~~d~i~ 31 (174)
.++++|.++|.++...-|.
T Consensus 8 av~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EEETTSEEEEEECCCTEEE
T ss_pred EEeCCCCEEEEECCCCEEE
Confidence 4668999999998766553
No 141
>PF08339 RTX_C: RTX C-terminal domain; InterPro: IPR013550 This domain describes the C-terminal region of various bacterial haemolysins and leukotoxins, which belong to the RTX family of toxins. These are produced by various Gram negative bacteria, such as Escherichia coli (P09983 from SWISSPROT) and Actinobacillus pleuropneumoniae (P15377 from SWISSPROT). RTX toxins may interact with lipopolysaccharide (LPS) to functionally impair and eventually kill leukocytes []. This region is found in association with the RTX N-terminal domain (IPR003995 from INTERPRO) and multiple hemolysin-type calcium-binding repeats (IPR001343 from INTERPRO).
Probab=32.19 E-value=18 Score=26.08 Aligned_cols=37 Identities=14% Similarity=0.283 Sum_probs=24.6
Q ss_pred CCcccccCCceeeccCCcEEEEccCcCceecCCceeeccHHHHHHHh
Q psy2420 2 KKFLSKDKNEEIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYS 48 (174)
Q Consensus 2 ~~~~~tgd~~~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~ 48 (174)
+.||.+++. +. .+.+=+.|+=.+|++|-++.|+..+.
T Consensus 35 knWFk~~~~-~~---------~n~KIEqIidKnG~~ITs~qld~l~~ 71 (145)
T PF08339_consen 35 KNWFKEDNS-GN---------YNHKIEQIIDKNGRRITSDQLDKLLE 71 (145)
T ss_pred hhhhhcccc-cc---------chhhHHHHhcCCCCEEcHhHHHHHhc
Confidence 456666554 32 23334455557999999999999986
No 142
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=31.12 E-value=2.1e+02 Score=20.91 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=21.4
Q ss_pred HHHHHHHhcCcccceEEEEeeCCCCcEEEEEE
Q psy2420 41 EKIEAVYSKSLYVHQIFVYGESLKSYIVAIVV 72 (174)
Q Consensus 41 ~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~ 72 (174)
..|.+.+.+.|.|.+|.|+-.+ ....+|+.+
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg-~~A~Vgv~~ 87 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITG-NYAYVGVDL 87 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEEC-CEEEEEEEc
Confidence 4566777789999998888776 434444433
No 143
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=30.84 E-value=1.8e+02 Score=20.00 Aligned_cols=25 Identities=20% Similarity=0.415 Sum_probs=18.9
Q ss_pred eeccHHHHHHHhcCcccceEEEEeeCCC
Q psy2420 37 YIVPEKIEAVYSKSLYVHQIFVYGESLK 64 (174)
Q Consensus 37 ~V~p~~iE~~l~~~~~V~~~~V~g~~~~ 64 (174)
.+.++.++..+..-|. ++++|.+..
T Consensus 45 ~l~~~~l~~ll~~~pe---ivliGTG~~ 69 (117)
T cd05126 45 GLQPEELEELLEEGVE---VIVIGTGQS 69 (117)
T ss_pred cCCHHHHHHHHhcCCC---EEEEcCCCC
Confidence 4788888888866544 899999844
No 144
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=29.70 E-value=1.1e+02 Score=23.96 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=38.4
Q ss_pred eeeccCCcEEEEccCcCceecCCceeeccHHHHHHHh---------cCcccceEEEEeeCCCCcEEEEEEcChHH
Q psy2420 12 EIKSESGALKIIDRKRHIFKLAQGEYIVPEKIEAVYS---------KSLYVHQIFVYGESLKSYIVAIVVPDVDV 77 (174)
Q Consensus 12 ~~~d~~G~l~i~GR~~d~i~~s~G~~V~p~~iE~~l~---------~~~~V~~~~V~g~~~~~~~~a~v~~~~~~ 77 (174)
.+.++||...|.|..=| . +|.++.-+.++.... +.+. .+.+++|.++... ...|+.++++
T Consensus 61 ~Y~t~dg~y~i~G~l~d---~-~~~nlT~~~~~~~~~~~~~~~~~~~l~~-~~~i~~g~~~ak~-~I~vFtDp~C 129 (251)
T PRK11657 61 IYLTPDGKHAISGYMYD---E-KGENLSEALLEKEVYAPMGREMWQRLEQ-SHWILDGKADAPR-IVYVFADPNC 129 (251)
T ss_pred EEEcCCCCEEEEEEEEc---C-CCCccCHHHHHHHhcCCccHHHHHHhhc-cCCccccCCCCCe-EEEEEECCCC
Confidence 67889999999997544 4 477888777776421 2221 3467888774433 4455556654
No 145
>TIGR02804 ExbD_2 TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=28.93 E-value=1.5e+02 Score=20.29 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=16.9
Q ss_pred cCceecCCceeeccHHHHHHHhcC
Q psy2420 27 RHIFKLAQGEYIVPEKIEAVYSKS 50 (174)
Q Consensus 27 ~d~i~~s~G~~V~p~~iE~~l~~~ 50 (174)
+..+-+ +|+.++..+++..+.+.
T Consensus 59 ~g~~~~-~~~~v~~~~L~~~l~~~ 81 (121)
T TIGR02804 59 DNQLYF-NDKPISLEELEAEIAQL 81 (121)
T ss_pred CCCEEE-CCcccCHHHHHHHHHhh
Confidence 344444 78889999999988764
No 146
>PRK13978 ribose-5-phosphate isomerase A; Provisional
Probab=26.79 E-value=1.1e+02 Score=23.80 Aligned_cols=40 Identities=18% Similarity=0.032 Sum_probs=26.1
Q ss_pred EEEEccCcCceecCCceeeccHHHHHHHhcCcccceEEEE
Q psy2420 20 LKIIDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVY 59 (174)
Q Consensus 20 l~i~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~ 59 (174)
.++++.-.-++-+..+....|..++..|.+.|+|-+.-+|
T Consensus 169 p~vTDnGN~IlD~~f~~i~dp~~l~~~L~~ipGVVe~GlF 208 (228)
T PRK13978 169 AFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYF 208 (228)
T ss_pred ceECCCCcEEEEecCCCcCCHHHHHHHHhcCCcEeeeCCc
Confidence 3444444444444334445789999999999999887444
No 147
>PF07193 DUF1408: Protein of unknown function (DUF1408); InterPro: IPR009848 This entry is represented by Bacteriophage bIL285, Orf11. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Lactococcus lactis and related phage proteins of around 75 residues in length. The function of this family is unknown.
Probab=26.11 E-value=49 Score=20.39 Aligned_cols=14 Identities=21% Similarity=0.534 Sum_probs=11.8
Q ss_pred ccCCcEEEEccCcC
Q psy2420 15 SESGALKIIDRKRH 28 (174)
Q Consensus 15 d~~G~l~i~GR~~d 28 (174)
.+||.+|++.|++.
T Consensus 41 r~dgs~y~~~r~~~ 54 (75)
T PF07193_consen 41 RPDGSMYMTSRKKN 54 (75)
T ss_pred cCCCeEEEEEcccc
Confidence 48999999999765
No 148
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=25.11 E-value=83 Score=26.57 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=29.4
Q ss_pred EccCcCceecCCceeeccHHHHHHHhcCcccceEEEE
Q psy2420 23 IDRKRHIFKLAQGEYIVPEKIEAVYSKSLYVHQIFVY 59 (174)
Q Consensus 23 ~GR~~d~i~~s~G~~V~p~~iE~~l~~~~~V~~~~V~ 59 (174)
.|..-..+..+-|+-+.|++||++|...|.++-++++
T Consensus 102 ~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~v 138 (383)
T COG0075 102 YGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVV 138 (383)
T ss_pred hCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEE
Confidence 4555666777789999999999999999888765543
No 149
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=24.98 E-value=2.2e+02 Score=19.17 Aligned_cols=43 Identities=16% Similarity=0.292 Sum_probs=27.6
Q ss_pred eeccHHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHHHHHHHHcCCC
Q psy2420 37 YIVPEKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVVKCKALENGIP 88 (174)
Q Consensus 37 ~V~p~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~~~~~~~~~~~ 88 (174)
.+.++.++..+...| +++++|.+.... .|. ..+...++++|+.
T Consensus 39 ~l~~e~l~~l~~~~p---eiliiGTG~~~~-----~~~-~~~~~~l~~~gi~ 81 (109)
T cd05560 39 DLTAAHFEALLALQP---EVILLGTGERQR-----FPP-PALLAPLLARGIG 81 (109)
T ss_pred cCCHHHHHHHHhcCC---CEEEEecCCCCC-----cCC-HHHHHHHHHcCCe
Confidence 478888998887655 589999985432 333 3344445556653
No 150
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=24.80 E-value=61 Score=17.45 Aligned_cols=15 Identities=7% Similarity=0.164 Sum_probs=12.2
Q ss_pred eeccCCcEEEEccCc
Q psy2420 13 IKSESGALKIIDRKR 27 (174)
Q Consensus 13 ~~d~~G~l~i~GR~~ 27 (174)
..|.+|.+|+.|-..
T Consensus 19 avD~~GNiYv~G~T~ 33 (38)
T PF06739_consen 19 AVDSNGNIYVTGYTN 33 (38)
T ss_pred EECCCCCEEEEEeec
Confidence 478999999999654
No 151
>PF02457 DisA_N: DisA bacterial checkpoint controller nucleotide-binding; InterPro: IPR003390 The DisA protein is a bacterial checkpoint protein that dimerises into an octameric complex. The protein consists of three distinct domains. This domain is the first and is a globular, nucleotide-binding region; the next 146-289 residues constitute the DisA-linker family, IPR018906 from INTERPRO that consists of an elongated bundle of three alpha helices (alpha-6, alpha-10, and alpha-11), one side of which carries an additional three helices (alpha7-9), which thus forms a spine like-linker between domains 1 and 3. The C-terminal residues, of domain 3, are represented by family HHH, IPR000445 from INTERPRO the specific DNA-binding domain. The octameric complex thus has structurally linked nucleotide-binding and DNA-binding HhH domains and the nucleotide-binding domains are bound to a cyclic di-adenosine phosphate such that DisA is a specific di-adenylate cyclase. The di-adenylate cyclase activity is strongly suppressed by binding to branched DNA, but not to duplex or single-stranded DNA, suggesting a role for DisA as a monitor of the presence of stalled replication forks or recombination intermediates via DNA structure-modulated c-di-AMP synthesis.; PDB: 3C1Z_A 3C23_A 3C1Y_A 3C21_A 2FB5_A.
Probab=24.11 E-value=1.5e+02 Score=20.59 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=30.2
Q ss_pred cCCcEEEEccCcCceec-CCceeeccHHHHHHHhc-----CcccceEEEEeeCCCCcEEEEEE
Q psy2420 16 ESGALKIIDRKRHIFKL-AQGEYIVPEKIEAVYSK-----SLYVHQIFVYGESLKSYIVAIVV 72 (174)
Q Consensus 16 ~~G~l~i~GR~~d~i~~-s~G~~V~p~~iE~~l~~-----~~~V~~~~V~g~~~~~~~~a~v~ 72 (174)
.-|.|.++++..++-.+ ..|..+......+.|.+ +|...-|+|+..+ +-...+.++
T Consensus 12 ~~GaLiVi~~~~~l~~~~~~g~~i~~~~s~~~l~~iF~~~~~~hDGAviI~~~-~i~aag~~l 73 (122)
T PF02457_consen 12 RIGALIVIEDDDDLEEYIDQGIPIDADISPELLEEIFFPNSPLHDGAVIIDGG-RIVAAGAIL 73 (122)
T ss_dssp T--EEEEES-CCGGTTTEESSEEEEEE--HHHHHHHTSTTSTTSSSEEEEETT-CCEEEEEEE
T ss_pred CeEEEEEEeCCcCHHHHhcCCEEEcCccCHHHHHHhccCCCCCCCceEEEECC-eEEEEEEEe
Confidence 45888888877655333 24666555444444444 3888889888774 533333333
No 152
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=22.41 E-value=35 Score=20.51 Aligned_cols=25 Identities=24% Similarity=0.188 Sum_probs=21.0
Q ss_pred eeccHHHHHHHhcCcccceEEEEee
Q psy2420 37 YIVPEKIEAVYSKSLYVHQIFVYGE 61 (174)
Q Consensus 37 ~V~p~~iE~~l~~~~~V~~~~V~g~ 61 (174)
.+++..+++.+.++|.|.++-|--.
T Consensus 33 ~~~~~~~~~~l~~~p~V~~v~V~r~ 57 (69)
T PF08478_consen 33 SLDLKKIEQRLEKLPWVKSVSVSRR 57 (69)
T ss_dssp CSHHHHHHHCCCCTTTEEEEEEEEE
T ss_pred EECHHHHHHHHHcCCCEEEEEEEEe
Confidence 5678889999999999999988644
No 153
>KOG3866|consensus
Probab=21.86 E-value=3.4e+02 Score=22.53 Aligned_cols=57 Identities=23% Similarity=0.393 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCc-eeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHHHHHhCCCCCC
Q psy2420 99 KVKQMIMEDMAAWARQDGLRNF-EQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQIEDLYNPPNPT 169 (174)
Q Consensus 99 ~~~~~i~~~l~~~~~~~~l~~~-~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i~~ly~~~~~~ 169 (174)
+-..+++++. .+|.+. --|+.|..+++ +++.|=.+-..+...|..+++.+|...++.
T Consensus 227 dQLkEVWEE~------DgLdpn~fdPKTFF~LHD--------~NsDGfldeqELEaLFtkELEKvYdpkNee 284 (442)
T KOG3866|consen 227 DQLKEVWEES------DGLDPNQFDPKTFFALHD--------LNSDGFLDEQELEALFTKELEKVYDPKNEE 284 (442)
T ss_pred HHHHHHHHHh------cCCCcccCCcchheeeec--------cCCcccccHHHHHHHHHHHHHHhcCCCCcc
Confidence 3344555555 444432 24666666554 488999999999999999999999887654
No 154
>PF08789 PBCV_basic_adap: PBCV-specific basic adaptor domain; InterPro: IPR014897 The small PBCV-specific basic adaptor protein is found fused to S/T protein kinases and the 2-Cysteine domain [].
Probab=21.43 E-value=1.4e+02 Score=16.56 Aligned_cols=32 Identities=9% Similarity=0.036 Sum_probs=21.2
Q ss_pred eeeccCCcEEEEccCcC-ceecCCceeeccHHH
Q psy2420 12 EIKSESGALKIIDRKRH-IFKLAQGEYIVPEKI 43 (174)
Q Consensus 12 ~~~d~~G~l~i~GR~~d-~i~~s~G~~V~p~~i 43 (174)
|..|..|...+.|-..- .++.++|.+|++...
T Consensus 2 GkvdakgR~i~~g~rGg~yV~~~~GKKvyvkk~ 34 (40)
T PF08789_consen 2 GKVDAKGRKIFKGPRGGTYVISDGGKKVYVKKL 34 (40)
T ss_pred CcccCcCCEEEECCCCCEEEeCCCCcEEeeEEc
Confidence 45788899888884444 444444688877543
No 155
>PRK11179 DNA-binding transcriptional regulator AsnC; Provisional
Probab=20.66 E-value=3.2e+02 Score=19.37 Aligned_cols=37 Identities=11% Similarity=0.071 Sum_probs=25.7
Q ss_pred HHHHHHHhcCcccceEEEEeeCCCCcEEEEEEcChHHH
Q psy2420 41 EKIEAVYSKSLYVHQIFVYGESLKSYIVAIVVPDVDVV 78 (174)
Q Consensus 41 ~~iE~~l~~~~~V~~~~V~g~~~~~~~~a~v~~~~~~~ 78 (174)
..+.+.+..+|.|..|..+.-. ....+.+.+++.+.+
T Consensus 84 ~~~~~~l~~~p~V~~~~~~tG~-~dl~~~v~~~d~~~l 120 (153)
T PRK11179 84 PSALAKLESLDEVVEAYYTTGH-YSIFIKVMCRSIDAL 120 (153)
T ss_pred HHHHHHHhCCCCEEEEEEcccC-CCEEEEEEECCHHHH
Confidence 5677778899999999877433 456566666665543
No 156
>PF05697 Trigger_N: Bacterial trigger factor protein (TF); InterPro: IPR008881 In the Escherichia coli cytosol, a fraction of the newly synthesised proteins requires the activity of molecular chaperones for folding to the native state. The major chaperones implicated in this folding process are the ribosome-associated Trigger Factor (TF), and the DnaK and GroEL chaperones with their respective co-chaperones. Trigger Factor is an ATP-independent chaperone and displays chaperone and peptidyl-prolyl-cis-trans-isomerase (PPIase) activities in vitro. It is composed of at least three domains, an N-terminal domain which mediates association with the large ribosomal subunit, a central substrate binding and PPIase domain with homology to FKBP proteins, and a C-terminal domain of unknown function. The positioning of TF at the peptide exit channel, together with its ability to interact with nascent chains as short as 57 residues renders TF a prime candidate for being the first chaperone that binds to the nascent polypeptide chains []. This group of sequences contain the ribosomal subunit association domain.; GO: 0006457 protein folding, 0015031 protein transport; PDB: 2D3O_1 1W26_A 1P9Y_A 1OMS_C 1T11_A 3GU0_A 2NSB_A 2NSC_A 3GTY_X.
Probab=20.60 E-value=2.5e+02 Score=19.63 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCceeeeeEEEecCCCCcCCCccCccccccHHHHHHHHHHHH
Q psy2420 98 PKVKQMIMEDMAAWARQDGLRNFEQVKDIYLHPDPFSVQNGLLTPNFKMQRAQLKSYFKPQI 159 (174)
Q Consensus 98 ~~~~~~i~~~l~~~~~~~~l~~~~~p~~v~~~~~~~~~~~~~~T~tgKv~R~~i~~~y~~~i 159 (174)
+++...+...+..+.++.++|+| | .||+-+..+.++|...|
T Consensus 22 ~~~~~~~~~~l~~~~k~~~ipGF-R--------------------kGK~P~~vi~~~~g~~i 62 (145)
T PF05697_consen 22 EEVEKAYEKALKELAKKVKIPGF-R--------------------KGKAPRNVIEKRYGKEI 62 (145)
T ss_dssp HHHHHHHHHHHHHHHTTTTBTTS----------------------TTSS-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCC-C--------------------CCCCCHHHHHHHHHHHH
Confidence 34445566777777766677776 2 37777777777776654
No 157
>PTZ00380 microtubule-associated protein (MAP); Provisional
Probab=20.37 E-value=63 Score=22.63 Aligned_cols=15 Identities=27% Similarity=0.333 Sum_probs=10.6
Q ss_pred eeccCCcEEEEccCc
Q psy2420 13 IKSESGALKIIDRKR 27 (174)
Q Consensus 13 ~~d~~G~l~i~GR~~ 27 (174)
+-|+||+||+.=-..
T Consensus 93 ~KDeDGFLYi~Ys~e 107 (121)
T PTZ00380 93 CKRDDGFLYVSVRTE 107 (121)
T ss_pred hcCCCCeEEEEEccc
Confidence 347999999875433
Done!